Multiple sequence alignment - TraesCS3D01G258000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G258000 chr3D 100.000 4562 0 0 1 4562 360395660 360400221 0.000000e+00 8425.0
1 TraesCS3D01G258000 chr3D 86.395 147 20 0 1112 1258 110245381 110245235 1.310000e-35 161.0
2 TraesCS3D01G258000 chr3D 86.869 99 13 0 4102 4200 540254845 540254747 1.340000e-20 111.0
3 TraesCS3D01G258000 chr3D 83.721 86 11 3 3940 4024 47883862 47883779 1.360000e-10 78.7
4 TraesCS3D01G258000 chr3B 92.897 4252 171 48 2 4193 466296096 466300276 0.000000e+00 6058.0
5 TraesCS3D01G258000 chr3B 93.750 48 1 1 3938 3983 507114281 507114234 2.280000e-08 71.3
6 TraesCS3D01G258000 chr3A 93.298 3432 112 37 458 3830 479780561 479783933 0.000000e+00 4955.0
7 TraesCS3D01G258000 chr3A 91.614 477 21 11 1 467 479779912 479780379 3.850000e-180 641.0
8 TraesCS3D01G258000 chr3A 93.443 183 12 0 4201 4383 554204709 554204891 5.820000e-69 272.0
9 TraesCS3D01G258000 chr3A 92.896 183 13 0 4201 4383 217786445 217786627 2.710000e-67 267.0
10 TraesCS3D01G258000 chr3A 89.691 194 14 5 4198 4386 519234593 519234785 4.560000e-60 243.0
11 TraesCS3D01G258000 chr3A 87.075 147 19 0 1112 1258 120223546 120223692 2.820000e-37 167.0
12 TraesCS3D01G258000 chr3A 79.845 129 12 10 3944 4059 676247806 676247679 1.050000e-11 82.4
13 TraesCS3D01G258000 chr6B 82.547 1335 150 49 984 2280 311554370 311553081 0.000000e+00 1098.0
14 TraesCS3D01G258000 chr6B 86.579 611 63 11 3228 3832 311545154 311544557 0.000000e+00 656.0
15 TraesCS3D01G258000 chr6B 80.997 642 74 29 2324 2953 311552967 311552362 2.490000e-127 466.0
16 TraesCS3D01G258000 chr6B 85.185 162 24 0 4389 4550 599755089 599754928 2.820000e-37 167.0
17 TraesCS3D01G258000 chr6D 82.485 1336 148 44 984 2280 225144018 225145306 0.000000e+00 1092.0
18 TraesCS3D01G258000 chr6D 87.070 611 63 9 3228 3832 225158036 225158636 0.000000e+00 676.0
19 TraesCS3D01G258000 chr6D 77.652 264 39 14 3940 4193 105561993 105561740 4.760000e-30 143.0
20 TraesCS3D01G258000 chr6D 81.061 132 12 7 3940 4059 463648356 463648226 4.860000e-15 93.5
21 TraesCS3D01G258000 chr2A 93.443 183 12 0 4201 4383 212919347 212919165 5.820000e-69 272.0
22 TraesCS3D01G258000 chr2A 91.803 183 14 1 4203 4384 273228939 273229121 2.110000e-63 254.0
23 TraesCS3D01G258000 chr2A 90.426 188 16 2 4197 4383 128174467 128174281 3.520000e-61 246.0
24 TraesCS3D01G258000 chr4B 92.147 191 13 2 4194 4383 79002207 79002018 7.520000e-68 268.0
25 TraesCS3D01G258000 chr7A 91.803 183 15 0 4201 4383 391572968 391572786 5.860000e-64 255.0
26 TraesCS3D01G258000 chr7A 82.927 164 28 0 1094 1257 511714217 511714380 1.020000e-31 148.0
27 TraesCS3D01G258000 chr7A 85.088 114 9 3 3943 4048 3011842 3011729 4.830000e-20 110.0
28 TraesCS3D01G258000 chr5B 91.848 184 13 2 4201 4383 382306428 382306246 5.860000e-64 255.0
29 TraesCS3D01G258000 chr6A 89.474 171 18 0 4389 4559 613270497 613270667 2.760000e-52 217.0
30 TraesCS3D01G258000 chr7D 84.756 164 25 0 1094 1257 421410243 421410080 1.020000e-36 165.0
31 TraesCS3D01G258000 chr7D 88.542 96 11 0 4099 4194 397564211 397564306 2.880000e-22 117.0
32 TraesCS3D01G258000 chr1A 84.211 171 25 2 4389 4559 267917504 267917672 1.020000e-36 165.0
33 TraesCS3D01G258000 chr1A 88.095 84 10 0 4117 4200 73318155 73318072 2.900000e-17 100.0
34 TraesCS3D01G258000 chr2B 83.237 173 29 0 4387 4559 69032375 69032203 4.720000e-35 159.0
35 TraesCS3D01G258000 chr2B 86.517 89 12 0 4106 4194 399824591 399824679 1.040000e-16 99.0
36 TraesCS3D01G258000 chr7B 83.735 166 25 2 1094 1258 437673149 437672985 6.110000e-34 156.0
37 TraesCS3D01G258000 chr7B 91.579 95 8 0 4099 4193 401542127 401542221 1.030000e-26 132.0
38 TraesCS3D01G258000 chr2D 81.646 158 20 4 4409 4559 633610997 633610842 6.200000e-24 122.0
39 TraesCS3D01G258000 chr2D 78.000 150 14 11 3938 4068 471454487 471454636 4.890000e-10 76.8
40 TraesCS3D01G258000 chr2D 82.051 78 13 1 4384 4461 556617676 556617600 1.060000e-06 65.8
41 TraesCS3D01G258000 chr4A 86.667 90 12 0 4102 4191 680415391 680415480 2.900000e-17 100.0
42 TraesCS3D01G258000 chr4A 85.417 96 12 2 4106 4200 618881461 618881367 1.040000e-16 99.0
43 TraesCS3D01G258000 chr4A 92.857 42 1 1 3942 3983 2963505 2963466 4.930000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G258000 chr3D 360395660 360400221 4561 False 8425 8425 100.000 1 4562 1 chr3D.!!$F1 4561
1 TraesCS3D01G258000 chr3B 466296096 466300276 4180 False 6058 6058 92.897 2 4193 1 chr3B.!!$F1 4191
2 TraesCS3D01G258000 chr3A 479779912 479783933 4021 False 2798 4955 92.456 1 3830 2 chr3A.!!$F5 3829
3 TraesCS3D01G258000 chr6B 311552362 311554370 2008 True 782 1098 81.772 984 2953 2 chr6B.!!$R3 1969
4 TraesCS3D01G258000 chr6B 311544557 311545154 597 True 656 656 86.579 3228 3832 1 chr6B.!!$R1 604
5 TraesCS3D01G258000 chr6D 225144018 225145306 1288 False 1092 1092 82.485 984 2280 1 chr6D.!!$F1 1296
6 TraesCS3D01G258000 chr6D 225158036 225158636 600 False 676 676 87.070 3228 3832 1 chr6D.!!$F2 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
297 306 0.109365 GCATATGCGTGGCACAACAA 60.109 50.000 19.09 6.70 44.16 2.83 F
937 1162 0.179113 CGCTTCTCTTCCTCCTCTGC 60.179 60.000 0.00 0.00 0.00 4.26 F
939 1164 1.136891 GCTTCTCTTCCTCCTCTGCTC 59.863 57.143 0.00 0.00 0.00 4.26 F
1314 1558 1.408702 TGGTTTGGTTGCTTCTCTTGC 59.591 47.619 0.00 0.00 0.00 4.01 F
3196 3612 0.034670 ACTTTCTCAGGGCATGCCTC 60.035 55.000 34.70 24.32 36.10 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1315 1559 0.607489 GAGGCAGAGGAAGCAAGCAA 60.607 55.000 0.00 0.0 0.00 3.91 R
2731 3127 0.591170 CGGGCAGGTTGTGTAAGTTG 59.409 55.000 0.00 0.0 0.00 3.16 R
2878 3274 3.537580 ACACGTGTTTACAGTTCATGGT 58.462 40.909 17.22 0.0 0.00 3.55 R
3280 3697 1.555477 CCCCCTGCATTGTGCCATTT 61.555 55.000 0.00 0.0 44.23 2.32 R
4529 4962 0.173708 GAGTTAGGGTGCGACAGAGG 59.826 60.000 0.00 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
137 139 2.337583 ACAAGTGTATGTAGTGCAGCG 58.662 47.619 0.00 0.00 0.00 5.18
138 140 1.660607 CAAGTGTATGTAGTGCAGCGG 59.339 52.381 0.00 0.00 0.00 5.52
215 224 2.738480 CGACCCGTGTGGAAAGGA 59.262 61.111 0.00 0.00 37.49 3.36
264 273 0.251787 AAAATGGACAGAGGTGGGCC 60.252 55.000 0.00 0.00 0.00 5.80
295 304 1.226660 GGCATATGCGTGGCACAAC 60.227 57.895 21.04 9.59 43.04 3.32
296 305 1.505807 GCATATGCGTGGCACAACA 59.494 52.632 19.09 15.31 44.16 3.33
297 306 0.109365 GCATATGCGTGGCACAACAA 60.109 50.000 19.09 6.70 44.16 2.83
405 416 5.038247 CGTTCCCCGTATTTTTATATGGC 57.962 43.478 0.00 0.00 32.97 4.40
408 419 6.128472 CGTTCCCCGTATTTTTATATGGCTAC 60.128 42.308 0.00 0.00 32.97 3.58
410 421 7.795534 TCCCCGTATTTTTATATGGCTACTA 57.204 36.000 0.00 0.00 32.97 1.82
413 424 8.889717 CCCCGTATTTTTATATGGCTACTATTG 58.110 37.037 0.00 0.00 32.97 1.90
497 699 1.255667 GCTGACTTCCCACCTACCGA 61.256 60.000 0.00 0.00 0.00 4.69
498 700 0.818296 CTGACTTCCCACCTACCGAG 59.182 60.000 0.00 0.00 0.00 4.63
499 701 0.406750 TGACTTCCCACCTACCGAGA 59.593 55.000 0.00 0.00 0.00 4.04
500 702 1.006758 TGACTTCCCACCTACCGAGAT 59.993 52.381 0.00 0.00 0.00 2.75
501 703 2.108970 GACTTCCCACCTACCGAGATT 58.891 52.381 0.00 0.00 0.00 2.40
502 704 3.294214 GACTTCCCACCTACCGAGATTA 58.706 50.000 0.00 0.00 0.00 1.75
504 706 2.376695 TCCCACCTACCGAGATTAGG 57.623 55.000 0.00 0.00 41.86 2.69
506 708 1.339097 CCACCTACCGAGATTAGGGG 58.661 60.000 0.68 0.00 40.60 4.79
522 724 1.733526 GGGGGAAACATGCGTATGC 59.266 57.895 13.82 0.00 37.85 3.14
532 734 2.972505 GCGTATGCATGGGGGTCG 60.973 66.667 10.16 5.77 42.15 4.79
543 745 2.209690 TGGGGGTCGATTTCTTTTCC 57.790 50.000 0.00 0.00 0.00 3.13
604 806 8.388656 AGAGAAAAGTATTATCCACCTAACCA 57.611 34.615 0.00 0.00 0.00 3.67
936 1161 0.459489 CCGCTTCTCTTCCTCCTCTG 59.541 60.000 0.00 0.00 0.00 3.35
937 1162 0.179113 CGCTTCTCTTCCTCCTCTGC 60.179 60.000 0.00 0.00 0.00 4.26
938 1163 1.194218 GCTTCTCTTCCTCCTCTGCT 58.806 55.000 0.00 0.00 0.00 4.24
939 1164 1.136891 GCTTCTCTTCCTCCTCTGCTC 59.863 57.143 0.00 0.00 0.00 4.26
940 1165 2.738743 CTTCTCTTCCTCCTCTGCTCT 58.261 52.381 0.00 0.00 0.00 4.09
981 1206 2.177580 CCGACCCACACACACACAC 61.178 63.158 0.00 0.00 0.00 3.82
982 1207 2.521771 CGACCCACACACACACACG 61.522 63.158 0.00 0.00 0.00 4.49
986 1211 3.935872 CACACACACACACGCCCG 61.936 66.667 0.00 0.00 0.00 6.13
1311 1555 4.405358 TGATTTTGGTTTGGTTGCTTCTCT 59.595 37.500 0.00 0.00 0.00 3.10
1312 1556 4.817318 TTTTGGTTTGGTTGCTTCTCTT 57.183 36.364 0.00 0.00 0.00 2.85
1313 1557 3.799281 TTGGTTTGGTTGCTTCTCTTG 57.201 42.857 0.00 0.00 0.00 3.02
1314 1558 1.408702 TGGTTTGGTTGCTTCTCTTGC 59.591 47.619 0.00 0.00 0.00 4.01
1315 1559 1.683385 GGTTTGGTTGCTTCTCTTGCT 59.317 47.619 0.00 0.00 0.00 3.91
1643 1890 2.657297 GCAATCCCACCTTTGCAGA 58.343 52.632 2.96 0.00 45.83 4.26
1877 2153 4.021981 GCCATTGCTTCTTCCTTGTTACTT 60.022 41.667 0.00 0.00 33.53 2.24
1982 2271 4.365111 GTGCCAGGGGTGATGCCA 62.365 66.667 0.00 0.00 39.65 4.92
2214 2505 4.103311 AGCCTGAGAAGTTTGGTTAGTTCT 59.897 41.667 0.00 0.00 39.81 3.01
2247 2544 6.199937 ACTTTTGCCATAGCTAACTCATTG 57.800 37.500 0.00 0.00 40.80 2.82
2282 2579 4.050553 CAGTGATTTGCAAATTGGTTCGT 58.949 39.130 24.81 1.46 0.00 3.85
2295 2595 7.515059 GCAAATTGGTTCGTTTGTATGCATATC 60.515 37.037 10.16 4.65 37.57 1.63
2305 2605 7.438160 TCGTTTGTATGCATATCTTCTTACTGG 59.562 37.037 10.16 0.00 0.00 4.00
2731 3127 7.055667 TGGTTAGATCATCTACTCCAATCAC 57.944 40.000 12.82 0.00 33.42 3.06
2878 3274 6.651643 ACCTTAACTCAAAACGCATATGTACA 59.348 34.615 4.29 0.00 0.00 2.90
2913 3310 5.418310 AACACGTGTTTTCTTGTATCAGG 57.582 39.130 27.70 0.00 33.93 3.86
3017 3421 7.016361 ACACGATTTATGCTTGTATCTTTCC 57.984 36.000 0.00 0.00 0.00 3.13
3173 3585 3.185797 GCCTTGTAACAGAAAGTACACCG 59.814 47.826 0.00 0.00 0.00 4.94
3196 3612 0.034670 ACTTTCTCAGGGCATGCCTC 60.035 55.000 34.70 24.32 36.10 4.70
3239 3655 2.028930 AGGGACGATGTTTCTGTCTCAC 60.029 50.000 0.00 0.00 35.54 3.51
3280 3697 6.270156 TGCAGATGCTTTATTGTTGATGAA 57.730 33.333 6.35 0.00 42.66 2.57
3585 4002 2.263741 CCACCTCTGCTGTTGCACC 61.264 63.158 0.00 0.00 45.31 5.01
3662 4079 6.012858 TCCATATAGTCCCAATGGTTCATACC 60.013 42.308 0.00 0.00 45.26 2.73
3847 4272 0.467290 TGAGGGTGTGTTTGGAAGCC 60.467 55.000 0.00 0.00 0.00 4.35
3853 4278 0.961019 TGTGTTTGGAAGCCTGCATC 59.039 50.000 0.00 0.00 0.00 3.91
3859 4284 0.881118 TGGAAGCCTGCATCGTTTTC 59.119 50.000 0.00 0.00 0.00 2.29
3862 4287 2.029918 GGAAGCCTGCATCGTTTTCTTT 60.030 45.455 0.00 0.00 0.00 2.52
3863 4288 3.552890 GGAAGCCTGCATCGTTTTCTTTT 60.553 43.478 0.00 0.00 0.00 2.27
3864 4289 3.017265 AGCCTGCATCGTTTTCTTTTG 57.983 42.857 0.00 0.00 0.00 2.44
3866 4291 2.061028 CCTGCATCGTTTTCTTTTGCC 58.939 47.619 0.00 0.00 32.39 4.52
3867 4292 2.288395 CCTGCATCGTTTTCTTTTGCCT 60.288 45.455 0.00 0.00 32.39 4.75
3868 4293 3.383761 CTGCATCGTTTTCTTTTGCCTT 58.616 40.909 0.00 0.00 32.39 4.35
3869 4294 3.380142 TGCATCGTTTTCTTTTGCCTTC 58.620 40.909 0.00 0.00 32.39 3.46
3870 4295 3.068024 TGCATCGTTTTCTTTTGCCTTCT 59.932 39.130 0.00 0.00 32.39 2.85
3871 4296 4.051237 GCATCGTTTTCTTTTGCCTTCTT 58.949 39.130 0.00 0.00 0.00 2.52
3877 4302 7.357303 TCGTTTTCTTTTGCCTTCTTGTATAC 58.643 34.615 0.00 0.00 0.00 1.47
3885 4310 3.508402 TGCCTTCTTGTATACGTGTCTCA 59.492 43.478 0.00 0.00 0.00 3.27
3887 4312 5.109903 GCCTTCTTGTATACGTGTCTCATT 58.890 41.667 0.00 0.00 0.00 2.57
3891 4316 5.416083 TCTTGTATACGTGTCTCATTTGGG 58.584 41.667 0.00 0.00 0.00 4.12
3910 4335 5.435686 TGGGACAGACTAAGCAAATACAT 57.564 39.130 0.00 0.00 0.00 2.29
3939 4364 2.559668 ACCATATTATGCACATGGCTGC 59.440 45.455 15.01 0.00 42.54 5.25
3942 4367 0.466007 ATTATGCACATGGCTGCCGA 60.466 50.000 14.98 3.61 45.15 5.54
3951 4376 0.831711 ATGGCTGCCGAAAAAGGGTT 60.832 50.000 14.98 0.00 0.00 4.11
3952 4377 1.045911 TGGCTGCCGAAAAAGGGTTT 61.046 50.000 14.98 0.00 0.00 3.27
3953 4378 0.319555 GGCTGCCGAAAAAGGGTTTC 60.320 55.000 1.35 0.00 0.00 2.78
3954 4379 0.387565 GCTGCCGAAAAAGGGTTTCA 59.612 50.000 0.00 0.00 0.00 2.69
3955 4380 1.868109 GCTGCCGAAAAAGGGTTTCAC 60.868 52.381 0.00 0.00 0.00 3.18
3956 4381 1.681264 CTGCCGAAAAAGGGTTTCACT 59.319 47.619 0.30 0.00 0.00 3.41
4003 4436 9.579768 CCATCATCAATTAAAACCGATACAAAA 57.420 29.630 0.00 0.00 0.00 2.44
4008 4441 8.271231 TCAATTAAAACCGATACAAAAACACG 57.729 30.769 0.00 0.00 0.00 4.49
4025 4458 3.294493 GCCACCACCGCACACAAT 61.294 61.111 0.00 0.00 0.00 2.71
4027 4460 1.312371 GCCACCACCGCACACAATAT 61.312 55.000 0.00 0.00 0.00 1.28
4030 4463 2.351455 CACCACCGCACACAATATACA 58.649 47.619 0.00 0.00 0.00 2.29
4031 4464 2.942376 CACCACCGCACACAATATACAT 59.058 45.455 0.00 0.00 0.00 2.29
4038 4471 3.303990 CGCACACAATATACATCCAAGGC 60.304 47.826 0.00 0.00 0.00 4.35
4040 4473 4.097741 GCACACAATATACATCCAAGGCAA 59.902 41.667 0.00 0.00 0.00 4.52
4041 4474 5.734220 GCACACAATATACATCCAAGGCAAG 60.734 44.000 0.00 0.00 0.00 4.01
4054 4487 0.394352 AGGCAAGATACAAAGGGCCG 60.394 55.000 0.00 0.00 45.79 6.13
4060 4493 2.830186 GATACAAAGGGCCGGGCACA 62.830 60.000 30.95 1.49 32.33 4.57
4077 4510 0.538746 ACACCACCCCATCGAAAACC 60.539 55.000 0.00 0.00 0.00 3.27
4088 4521 2.196295 TCGAAAACCAAGCAAAACCG 57.804 45.000 0.00 0.00 0.00 4.44
4089 4522 1.473278 TCGAAAACCAAGCAAAACCGT 59.527 42.857 0.00 0.00 0.00 4.83
4100 4533 0.317519 CAAAACCGTTTGGAGCGACC 60.318 55.000 0.00 0.00 40.47 4.79
4110 4543 0.178068 TGGAGCGACCATAAAGAGGC 59.822 55.000 1.68 0.00 44.64 4.70
4125 4558 3.723348 GGCGAGCCGGACAACAAC 61.723 66.667 5.05 0.00 0.00 3.32
4134 4567 0.110238 CGGACAACAACGAAGCCATG 60.110 55.000 0.00 0.00 0.00 3.66
4135 4568 0.387239 GGACAACAACGAAGCCATGC 60.387 55.000 0.00 0.00 0.00 4.06
4137 4570 0.823356 ACAACAACGAAGCCATGCCT 60.823 50.000 0.00 0.00 0.00 4.75
4139 4572 1.745087 CAACAACGAAGCCATGCCTAT 59.255 47.619 0.00 0.00 0.00 2.57
4141 4574 3.275617 ACAACGAAGCCATGCCTATAA 57.724 42.857 0.00 0.00 0.00 0.98
4142 4575 3.616219 ACAACGAAGCCATGCCTATAAA 58.384 40.909 0.00 0.00 0.00 1.40
4143 4576 4.013728 ACAACGAAGCCATGCCTATAAAA 58.986 39.130 0.00 0.00 0.00 1.52
4144 4577 4.142469 ACAACGAAGCCATGCCTATAAAAC 60.142 41.667 0.00 0.00 0.00 2.43
4145 4578 2.612212 ACGAAGCCATGCCTATAAAACG 59.388 45.455 0.00 0.00 0.00 3.60
4180 4613 0.672342 GTACGACCATGGATAGCCGT 59.328 55.000 21.47 19.45 36.79 5.68
4195 4628 4.873129 CGTCACCGCCCGATCCAG 62.873 72.222 0.00 0.00 0.00 3.86
4196 4629 3.771160 GTCACCGCCCGATCCAGT 61.771 66.667 0.00 0.00 0.00 4.00
4197 4630 2.043752 TCACCGCCCGATCCAGTA 60.044 61.111 0.00 0.00 0.00 2.74
4198 4631 2.125326 TCACCGCCCGATCCAGTAG 61.125 63.158 0.00 0.00 0.00 2.57
4199 4632 2.125326 CACCGCCCGATCCAGTAGA 61.125 63.158 0.00 0.00 0.00 2.59
4200 4633 2.125961 ACCGCCCGATCCAGTAGAC 61.126 63.158 0.00 0.00 0.00 2.59
4201 4634 2.125326 CCGCCCGATCCAGTAGACA 61.125 63.158 0.00 0.00 0.00 3.41
4202 4635 1.464376 CCGCCCGATCCAGTAGACAT 61.464 60.000 0.00 0.00 0.00 3.06
4203 4636 0.389391 CGCCCGATCCAGTAGACATT 59.611 55.000 0.00 0.00 0.00 2.71
4204 4637 1.869754 CGCCCGATCCAGTAGACATTG 60.870 57.143 0.00 0.00 0.00 2.82
4205 4638 1.139058 GCCCGATCCAGTAGACATTGT 59.861 52.381 0.00 0.00 0.00 2.71
4206 4639 2.420129 GCCCGATCCAGTAGACATTGTT 60.420 50.000 0.00 0.00 0.00 2.83
4207 4640 3.198068 CCCGATCCAGTAGACATTGTTG 58.802 50.000 0.00 0.00 0.00 3.33
4208 4641 3.118775 CCCGATCCAGTAGACATTGTTGA 60.119 47.826 0.00 0.00 0.00 3.18
4209 4642 4.115516 CCGATCCAGTAGACATTGTTGAG 58.884 47.826 0.00 0.00 0.00 3.02
4210 4643 4.142160 CCGATCCAGTAGACATTGTTGAGA 60.142 45.833 0.00 0.00 0.00 3.27
4211 4644 5.410924 CGATCCAGTAGACATTGTTGAGAA 58.589 41.667 0.00 0.00 0.00 2.87
4212 4645 5.869344 CGATCCAGTAGACATTGTTGAGAAA 59.131 40.000 0.00 0.00 0.00 2.52
4213 4646 6.368791 CGATCCAGTAGACATTGTTGAGAAAA 59.631 38.462 0.00 0.00 0.00 2.29
4214 4647 7.065085 CGATCCAGTAGACATTGTTGAGAAAAT 59.935 37.037 0.00 0.00 0.00 1.82
4215 4648 7.672983 TCCAGTAGACATTGTTGAGAAAATC 57.327 36.000 0.00 0.00 0.00 2.17
4216 4649 6.368791 TCCAGTAGACATTGTTGAGAAAATCG 59.631 38.462 0.00 0.00 0.00 3.34
4217 4650 6.147821 CCAGTAGACATTGTTGAGAAAATCGT 59.852 38.462 0.00 0.00 0.00 3.73
4218 4651 7.307989 CCAGTAGACATTGTTGAGAAAATCGTT 60.308 37.037 0.00 0.00 0.00 3.85
4219 4652 8.708742 CAGTAGACATTGTTGAGAAAATCGTTA 58.291 33.333 0.00 0.00 0.00 3.18
4220 4653 9.268268 AGTAGACATTGTTGAGAAAATCGTTAA 57.732 29.630 0.00 0.00 0.00 2.01
4221 4654 9.314501 GTAGACATTGTTGAGAAAATCGTTAAC 57.685 33.333 0.00 0.00 0.00 2.01
4222 4655 8.154649 AGACATTGTTGAGAAAATCGTTAACT 57.845 30.769 3.71 0.00 0.00 2.24
4223 4656 8.070171 AGACATTGTTGAGAAAATCGTTAACTG 58.930 33.333 3.71 0.00 0.00 3.16
4224 4657 7.138736 ACATTGTTGAGAAAATCGTTAACTGG 58.861 34.615 3.71 0.00 0.00 4.00
4225 4658 6.687081 TTGTTGAGAAAATCGTTAACTGGT 57.313 33.333 3.71 0.00 0.00 4.00
4226 4659 7.789273 TTGTTGAGAAAATCGTTAACTGGTA 57.211 32.000 3.71 0.00 0.00 3.25
4227 4660 7.181143 TGTTGAGAAAATCGTTAACTGGTAC 57.819 36.000 3.71 0.00 0.00 3.34
4228 4661 6.203338 TGTTGAGAAAATCGTTAACTGGTACC 59.797 38.462 4.43 4.43 0.00 3.34
4229 4662 6.105397 TGAGAAAATCGTTAACTGGTACCT 57.895 37.500 14.36 0.00 0.00 3.08
4230 4663 5.929992 TGAGAAAATCGTTAACTGGTACCTG 59.070 40.000 16.66 16.66 0.00 4.00
4231 4664 4.694037 AGAAAATCGTTAACTGGTACCTGC 59.306 41.667 18.02 1.78 0.00 4.85
4232 4665 3.975168 AATCGTTAACTGGTACCTGCT 57.025 42.857 18.02 9.21 0.00 4.24
4233 4666 3.521947 ATCGTTAACTGGTACCTGCTC 57.478 47.619 18.02 6.01 0.00 4.26
4234 4667 1.200716 TCGTTAACTGGTACCTGCTCG 59.799 52.381 18.02 15.80 0.00 5.03
4235 4668 1.734707 CGTTAACTGGTACCTGCTCGG 60.735 57.143 18.02 1.54 39.35 4.63
4237 4670 1.636148 TAACTGGTACCTGCTCGGTT 58.364 50.000 18.02 8.35 46.37 4.44
4238 4671 0.034896 AACTGGTACCTGCTCGGTTG 59.965 55.000 18.02 0.00 46.37 3.77
4239 4672 1.079127 CTGGTACCTGCTCGGTTGG 60.079 63.158 14.36 0.00 46.37 3.77
4240 4673 2.436115 GGTACCTGCTCGGTTGGC 60.436 66.667 4.06 0.00 46.37 4.52
4241 4674 2.663196 GTACCTGCTCGGTTGGCT 59.337 61.111 3.61 0.00 46.37 4.75
4242 4675 1.741770 GTACCTGCTCGGTTGGCTG 60.742 63.158 3.61 0.00 46.37 4.85
4243 4676 2.954684 TACCTGCTCGGTTGGCTGG 61.955 63.158 9.45 9.45 46.37 4.85
4248 4681 4.379243 CTCGGTTGGCTGGCGAGT 62.379 66.667 0.00 0.00 0.00 4.18
4249 4682 2.992689 TCGGTTGGCTGGCGAGTA 60.993 61.111 0.00 0.00 0.00 2.59
4250 4683 2.509336 CGGTTGGCTGGCGAGTAG 60.509 66.667 0.00 0.00 0.00 2.57
4251 4684 2.125106 GGTTGGCTGGCGAGTAGG 60.125 66.667 0.00 0.00 0.00 3.18
4252 4685 2.125106 GTTGGCTGGCGAGTAGGG 60.125 66.667 0.00 0.00 0.00 3.53
4253 4686 3.399181 TTGGCTGGCGAGTAGGGG 61.399 66.667 0.00 0.00 0.00 4.79
4254 4687 3.916438 TTGGCTGGCGAGTAGGGGA 62.916 63.158 0.00 0.00 0.00 4.81
4255 4688 2.844839 GGCTGGCGAGTAGGGGAT 60.845 66.667 0.00 0.00 0.00 3.85
4256 4689 2.444256 GGCTGGCGAGTAGGGGATT 61.444 63.158 0.00 0.00 0.00 3.01
4257 4690 1.119574 GGCTGGCGAGTAGGGGATTA 61.120 60.000 0.00 0.00 0.00 1.75
4258 4691 0.756903 GCTGGCGAGTAGGGGATTAA 59.243 55.000 0.00 0.00 0.00 1.40
4259 4692 1.348036 GCTGGCGAGTAGGGGATTAAT 59.652 52.381 0.00 0.00 0.00 1.40
4260 4693 2.565834 GCTGGCGAGTAGGGGATTAATA 59.434 50.000 0.00 0.00 0.00 0.98
4261 4694 3.368531 GCTGGCGAGTAGGGGATTAATAG 60.369 52.174 0.00 0.00 0.00 1.73
4262 4695 3.170717 TGGCGAGTAGGGGATTAATAGG 58.829 50.000 0.00 0.00 0.00 2.57
4263 4696 2.093606 GGCGAGTAGGGGATTAATAGGC 60.094 54.545 0.00 0.00 0.00 3.93
4264 4697 2.832733 GCGAGTAGGGGATTAATAGGCT 59.167 50.000 0.00 0.00 0.00 4.58
4265 4698 4.021916 GCGAGTAGGGGATTAATAGGCTA 58.978 47.826 0.00 0.00 0.00 3.93
4266 4699 4.465305 GCGAGTAGGGGATTAATAGGCTAA 59.535 45.833 0.00 0.00 0.00 3.09
4267 4700 5.128991 GCGAGTAGGGGATTAATAGGCTAAT 59.871 44.000 0.00 0.00 0.00 1.73
4268 4701 6.683360 GCGAGTAGGGGATTAATAGGCTAATC 60.683 46.154 0.00 0.00 37.50 1.75
4269 4702 6.459848 CGAGTAGGGGATTAATAGGCTAATCG 60.460 46.154 0.00 0.00 38.61 3.34
4270 4703 5.661759 AGTAGGGGATTAATAGGCTAATCGG 59.338 44.000 0.00 0.00 38.61 4.18
4271 4704 3.200165 AGGGGATTAATAGGCTAATCGGC 59.800 47.826 0.00 0.00 38.61 5.54
4284 4717 5.376854 GCTAATCGGCCATGTAATCAATT 57.623 39.130 2.24 0.00 0.00 2.32
4285 4718 6.494893 GCTAATCGGCCATGTAATCAATTA 57.505 37.500 2.24 0.00 0.00 1.40
4286 4719 6.908825 GCTAATCGGCCATGTAATCAATTAA 58.091 36.000 2.24 0.00 0.00 1.40
4287 4720 7.538575 GCTAATCGGCCATGTAATCAATTAAT 58.461 34.615 2.24 0.00 0.00 1.40
4288 4721 7.698130 GCTAATCGGCCATGTAATCAATTAATC 59.302 37.037 2.24 0.00 0.00 1.75
4289 4722 7.765695 AATCGGCCATGTAATCAATTAATCT 57.234 32.000 2.24 0.00 0.00 2.40
4290 4723 6.558771 TCGGCCATGTAATCAATTAATCTG 57.441 37.500 2.24 0.00 0.00 2.90
4291 4724 6.295249 TCGGCCATGTAATCAATTAATCTGA 58.705 36.000 2.24 0.00 0.00 3.27
4292 4725 6.204688 TCGGCCATGTAATCAATTAATCTGAC 59.795 38.462 2.24 0.00 0.00 3.51
4293 4726 6.373779 GGCCATGTAATCAATTAATCTGACG 58.626 40.000 0.00 0.00 0.00 4.35
4294 4727 6.204688 GGCCATGTAATCAATTAATCTGACGA 59.795 38.462 0.00 0.00 0.00 4.20
4295 4728 7.094634 GGCCATGTAATCAATTAATCTGACGAT 60.095 37.037 0.00 0.00 0.00 3.73
4296 4729 8.292448 GCCATGTAATCAATTAATCTGACGATT 58.708 33.333 0.00 0.00 42.34 3.34
4310 4743 7.875316 ATCTGACGATTTATCAGTTTATCGG 57.125 36.000 0.00 0.00 43.47 4.18
4311 4744 5.690409 TCTGACGATTTATCAGTTTATCGGC 59.310 40.000 0.00 0.00 46.10 5.54
4312 4745 5.597806 TGACGATTTATCAGTTTATCGGCT 58.402 37.500 10.12 0.00 46.08 5.52
4313 4746 6.741109 TGACGATTTATCAGTTTATCGGCTA 58.259 36.000 10.12 0.00 46.08 3.93
4314 4747 6.639686 TGACGATTTATCAGTTTATCGGCTAC 59.360 38.462 10.12 0.10 46.08 3.58
4315 4748 6.746120 ACGATTTATCAGTTTATCGGCTACT 58.254 36.000 0.00 0.00 42.95 2.57
4316 4749 6.862090 ACGATTTATCAGTTTATCGGCTACTC 59.138 38.462 0.00 0.00 42.95 2.59
4317 4750 6.032565 CGATTTATCAGTTTATCGGCTACTCG 59.967 42.308 0.00 0.00 36.99 4.18
4318 4751 3.644884 ATCAGTTTATCGGCTACTCGG 57.355 47.619 0.00 0.00 0.00 4.63
4319 4752 2.372264 TCAGTTTATCGGCTACTCGGT 58.628 47.619 0.00 0.00 0.00 4.69
4320 4753 2.098607 TCAGTTTATCGGCTACTCGGTG 59.901 50.000 0.00 0.00 0.00 4.94
4321 4754 2.098607 CAGTTTATCGGCTACTCGGTGA 59.901 50.000 0.00 0.00 0.00 4.02
4322 4755 2.098770 AGTTTATCGGCTACTCGGTGAC 59.901 50.000 0.00 0.00 0.00 3.67
4323 4756 1.027357 TTATCGGCTACTCGGTGACC 58.973 55.000 0.00 0.00 0.00 4.02
4324 4757 0.820891 TATCGGCTACTCGGTGACCC 60.821 60.000 0.00 0.00 0.00 4.46
4325 4758 2.849096 ATCGGCTACTCGGTGACCCA 62.849 60.000 0.00 0.00 0.00 4.51
4326 4759 2.642254 CGGCTACTCGGTGACCCAA 61.642 63.158 0.00 0.00 0.00 4.12
4327 4760 1.905512 GGCTACTCGGTGACCCAAT 59.094 57.895 0.00 0.00 0.00 3.16
4328 4761 0.462047 GGCTACTCGGTGACCCAATG 60.462 60.000 0.00 0.00 0.00 2.82
4329 4762 0.535335 GCTACTCGGTGACCCAATGA 59.465 55.000 0.00 0.00 0.00 2.57
4330 4763 1.471676 GCTACTCGGTGACCCAATGAG 60.472 57.143 0.00 0.00 0.00 2.90
4331 4764 1.825474 CTACTCGGTGACCCAATGAGT 59.175 52.381 13.18 13.18 42.22 3.41
4332 4765 1.933021 ACTCGGTGACCCAATGAGTA 58.067 50.000 7.93 0.00 38.09 2.59
4333 4766 1.825474 ACTCGGTGACCCAATGAGTAG 59.175 52.381 7.93 0.00 38.09 2.57
4334 4767 1.137086 CTCGGTGACCCAATGAGTAGG 59.863 57.143 0.00 0.00 0.00 3.18
4346 4779 5.853936 CCAATGAGTAGGGATTAATCGACA 58.146 41.667 9.32 3.99 0.00 4.35
4347 4780 6.288294 CCAATGAGTAGGGATTAATCGACAA 58.712 40.000 9.32 1.80 0.00 3.18
4348 4781 6.936900 CCAATGAGTAGGGATTAATCGACAAT 59.063 38.462 9.32 0.00 0.00 2.71
4349 4782 7.445402 CCAATGAGTAGGGATTAATCGACAATT 59.555 37.037 9.32 8.38 0.00 2.32
4350 4783 8.840321 CAATGAGTAGGGATTAATCGACAATTT 58.160 33.333 9.32 1.21 0.00 1.82
4353 4786 9.321562 TGAGTAGGGATTAATCGACAATTTAAC 57.678 33.333 9.32 0.00 0.00 2.01
4354 4787 9.543783 GAGTAGGGATTAATCGACAATTTAACT 57.456 33.333 9.32 3.11 0.00 2.24
4355 4788 9.326413 AGTAGGGATTAATCGACAATTTAACTG 57.674 33.333 9.32 0.00 0.00 3.16
4356 4789 7.568199 AGGGATTAATCGACAATTTAACTGG 57.432 36.000 9.32 0.00 0.00 4.00
4357 4790 7.116736 AGGGATTAATCGACAATTTAACTGGT 58.883 34.615 9.32 0.00 0.00 4.00
4358 4791 7.614192 AGGGATTAATCGACAATTTAACTGGTT 59.386 33.333 9.32 0.00 0.00 3.67
4359 4792 8.895737 GGGATTAATCGACAATTTAACTGGTTA 58.104 33.333 9.32 0.00 0.00 2.85
4363 4796 9.976255 TTAATCGACAATTTAACTGGTTAATCG 57.024 29.630 15.08 15.08 36.21 3.34
4364 4797 6.411630 TCGACAATTTAACTGGTTAATCGG 57.588 37.500 18.33 0.00 35.88 4.18
4365 4798 6.164876 TCGACAATTTAACTGGTTAATCGGA 58.835 36.000 18.33 9.11 35.88 4.55
4366 4799 6.091169 TCGACAATTTAACTGGTTAATCGGAC 59.909 38.462 18.33 8.01 35.88 4.79
4367 4800 6.173191 ACAATTTAACTGGTTAATCGGACG 57.827 37.500 0.31 0.00 35.27 4.79
4368 4801 5.933463 ACAATTTAACTGGTTAATCGGACGA 59.067 36.000 0.31 0.00 35.27 4.20
4369 4802 6.427547 ACAATTTAACTGGTTAATCGGACGAA 59.572 34.615 0.31 0.00 35.27 3.85
4370 4803 7.120138 ACAATTTAACTGGTTAATCGGACGAAT 59.880 33.333 0.31 0.00 35.27 3.34
4371 4804 7.619964 ATTTAACTGGTTAATCGGACGAATT 57.380 32.000 0.31 0.00 35.27 2.17
4372 4805 6.651755 TTAACTGGTTAATCGGACGAATTC 57.348 37.500 0.31 0.00 30.78 2.17
4373 4806 4.467198 ACTGGTTAATCGGACGAATTCT 57.533 40.909 0.31 0.00 0.00 2.40
4374 4807 4.828829 ACTGGTTAATCGGACGAATTCTT 58.171 39.130 0.31 0.00 0.00 2.52
4375 4808 4.630069 ACTGGTTAATCGGACGAATTCTTG 59.370 41.667 0.31 0.00 0.00 3.02
4376 4809 4.823157 TGGTTAATCGGACGAATTCTTGA 58.177 39.130 3.52 0.00 0.00 3.02
4377 4810 5.239351 TGGTTAATCGGACGAATTCTTGAA 58.761 37.500 3.52 0.00 0.00 2.69
4378 4811 5.121142 TGGTTAATCGGACGAATTCTTGAAC 59.879 40.000 3.52 0.00 0.00 3.18
4379 4812 5.121142 GGTTAATCGGACGAATTCTTGAACA 59.879 40.000 3.52 0.00 0.00 3.18
4380 4813 4.928661 AATCGGACGAATTCTTGAACAG 57.071 40.909 3.52 0.00 0.00 3.16
4381 4814 2.683968 TCGGACGAATTCTTGAACAGG 58.316 47.619 3.52 0.00 0.00 4.00
4382 4815 1.732259 CGGACGAATTCTTGAACAGGG 59.268 52.381 3.52 0.00 0.00 4.45
4383 4816 1.468914 GGACGAATTCTTGAACAGGGC 59.531 52.381 3.52 0.00 0.00 5.19
4384 4817 1.468914 GACGAATTCTTGAACAGGGCC 59.531 52.381 3.52 0.00 0.00 5.80
4385 4818 1.202879 ACGAATTCTTGAACAGGGCCA 60.203 47.619 6.18 0.00 0.00 5.36
4386 4819 1.470098 CGAATTCTTGAACAGGGCCAG 59.530 52.381 6.18 0.00 0.00 4.85
4387 4820 2.519013 GAATTCTTGAACAGGGCCAGT 58.481 47.619 6.18 0.00 0.00 4.00
4388 4821 3.686016 GAATTCTTGAACAGGGCCAGTA 58.314 45.455 6.18 0.00 0.00 2.74
4389 4822 2.859165 TTCTTGAACAGGGCCAGTAG 57.141 50.000 6.18 0.00 0.00 2.57
4390 4823 2.024176 TCTTGAACAGGGCCAGTAGA 57.976 50.000 6.18 0.39 0.00 2.59
4391 4824 2.551270 TCTTGAACAGGGCCAGTAGAT 58.449 47.619 6.18 0.00 0.00 1.98
4392 4825 2.501723 TCTTGAACAGGGCCAGTAGATC 59.498 50.000 6.18 0.00 0.00 2.75
4393 4826 1.951209 TGAACAGGGCCAGTAGATCA 58.049 50.000 6.18 1.51 0.00 2.92
4394 4827 2.481441 TGAACAGGGCCAGTAGATCAT 58.519 47.619 6.18 0.00 0.00 2.45
4395 4828 2.171237 TGAACAGGGCCAGTAGATCATG 59.829 50.000 6.18 0.00 0.00 3.07
4396 4829 1.885049 ACAGGGCCAGTAGATCATGT 58.115 50.000 6.18 0.00 0.00 3.21
4397 4830 2.200081 ACAGGGCCAGTAGATCATGTT 58.800 47.619 6.18 0.00 0.00 2.71
4398 4831 2.578021 ACAGGGCCAGTAGATCATGTTT 59.422 45.455 6.18 0.00 0.00 2.83
4399 4832 3.010584 ACAGGGCCAGTAGATCATGTTTT 59.989 43.478 6.18 0.00 0.00 2.43
4400 4833 3.629398 CAGGGCCAGTAGATCATGTTTTC 59.371 47.826 6.18 0.00 0.00 2.29
4401 4834 3.266772 AGGGCCAGTAGATCATGTTTTCA 59.733 43.478 6.18 0.00 0.00 2.69
4402 4835 3.378427 GGGCCAGTAGATCATGTTTTCAC 59.622 47.826 4.39 0.00 0.00 3.18
4403 4836 3.378427 GGCCAGTAGATCATGTTTTCACC 59.622 47.826 0.00 0.00 0.00 4.02
4404 4837 4.265073 GCCAGTAGATCATGTTTTCACCT 58.735 43.478 0.00 0.00 0.00 4.00
4405 4838 4.095483 GCCAGTAGATCATGTTTTCACCTG 59.905 45.833 0.00 0.19 0.00 4.00
4406 4839 4.637534 CCAGTAGATCATGTTTTCACCTGG 59.362 45.833 0.00 0.00 0.00 4.45
4407 4840 5.491070 CAGTAGATCATGTTTTCACCTGGA 58.509 41.667 0.00 0.00 0.00 3.86
4408 4841 5.583854 CAGTAGATCATGTTTTCACCTGGAG 59.416 44.000 0.00 0.00 0.00 3.86
4409 4842 3.350833 AGATCATGTTTTCACCTGGAGC 58.649 45.455 0.00 0.00 0.00 4.70
4410 4843 2.655090 TCATGTTTTCACCTGGAGCA 57.345 45.000 0.00 0.00 0.00 4.26
4411 4844 2.942804 TCATGTTTTCACCTGGAGCAA 58.057 42.857 0.00 0.00 0.00 3.91
4412 4845 3.295093 TCATGTTTTCACCTGGAGCAAA 58.705 40.909 0.00 0.00 0.00 3.68
4413 4846 3.703556 TCATGTTTTCACCTGGAGCAAAA 59.296 39.130 0.00 0.00 0.00 2.44
4414 4847 3.518634 TGTTTTCACCTGGAGCAAAAC 57.481 42.857 17.79 17.79 38.61 2.43
4415 4848 2.159310 TGTTTTCACCTGGAGCAAAACG 60.159 45.455 18.61 0.00 40.23 3.60
4416 4849 2.045561 TTTCACCTGGAGCAAAACGA 57.954 45.000 0.00 0.00 0.00 3.85
4417 4850 1.305201 TTCACCTGGAGCAAAACGAC 58.695 50.000 0.00 0.00 0.00 4.34
4418 4851 0.179234 TCACCTGGAGCAAAACGACA 59.821 50.000 0.00 0.00 0.00 4.35
4419 4852 0.588252 CACCTGGAGCAAAACGACAG 59.412 55.000 0.00 0.00 0.00 3.51
4420 4853 0.535102 ACCTGGAGCAAAACGACAGG 60.535 55.000 0.00 7.42 46.42 4.00
4421 4854 0.250295 CCTGGAGCAAAACGACAGGA 60.250 55.000 2.99 0.00 44.88 3.86
4422 4855 1.151668 CTGGAGCAAAACGACAGGAG 58.848 55.000 0.00 0.00 0.00 3.69
4423 4856 0.468226 TGGAGCAAAACGACAGGAGT 59.532 50.000 0.00 0.00 0.00 3.85
4424 4857 0.868406 GGAGCAAAACGACAGGAGTG 59.132 55.000 0.00 0.00 0.00 3.51
4425 4858 1.583054 GAGCAAAACGACAGGAGTGT 58.417 50.000 0.00 0.00 40.71 3.55
4426 4859 1.261619 GAGCAAAACGACAGGAGTGTG 59.738 52.381 0.00 0.00 36.88 3.82
4427 4860 1.134521 AGCAAAACGACAGGAGTGTGA 60.135 47.619 0.00 0.00 36.88 3.58
4428 4861 1.668751 GCAAAACGACAGGAGTGTGAA 59.331 47.619 0.00 0.00 36.88 3.18
4429 4862 2.290641 GCAAAACGACAGGAGTGTGAAT 59.709 45.455 0.00 0.00 36.88 2.57
4430 4863 3.849645 GCAAAACGACAGGAGTGTGAATG 60.850 47.826 0.00 0.00 36.88 2.67
4431 4864 1.512926 AACGACAGGAGTGTGAATGC 58.487 50.000 0.00 0.00 36.88 3.56
4432 4865 0.667487 ACGACAGGAGTGTGAATGCG 60.667 55.000 0.00 0.00 36.88 4.73
4433 4866 0.388520 CGACAGGAGTGTGAATGCGA 60.389 55.000 0.00 0.00 36.88 5.10
4434 4867 1.071605 GACAGGAGTGTGAATGCGAC 58.928 55.000 0.00 0.00 36.88 5.19
4435 4868 0.667487 ACAGGAGTGTGAATGCGACG 60.667 55.000 0.00 0.00 34.75 5.12
4436 4869 0.388520 CAGGAGTGTGAATGCGACGA 60.389 55.000 0.00 0.00 0.00 4.20
4437 4870 0.388649 AGGAGTGTGAATGCGACGAC 60.389 55.000 0.00 0.00 0.00 4.34
4438 4871 1.674611 GGAGTGTGAATGCGACGACG 61.675 60.000 2.12 2.12 42.93 5.12
4439 4872 1.674611 GAGTGTGAATGCGACGACGG 61.675 60.000 9.67 0.00 40.15 4.79
4440 4873 1.731613 GTGTGAATGCGACGACGGA 60.732 57.895 9.67 6.70 44.78 4.69
4441 4874 1.443702 TGTGAATGCGACGACGGAG 60.444 57.895 9.67 0.00 43.81 4.63
4442 4875 2.506217 TGAATGCGACGACGGAGC 60.506 61.111 9.67 9.41 43.81 4.70
4443 4876 3.255379 GAATGCGACGACGGAGCC 61.255 66.667 9.67 0.00 43.81 4.70
4444 4877 3.701604 GAATGCGACGACGGAGCCT 62.702 63.158 9.67 2.23 43.81 4.58
4445 4878 3.296709 AATGCGACGACGGAGCCTT 62.297 57.895 9.67 7.67 43.81 4.35
4446 4879 3.701604 ATGCGACGACGGAGCCTTC 62.702 63.158 9.67 0.00 43.81 3.46
4447 4880 4.415332 GCGACGACGGAGCCTTCA 62.415 66.667 9.67 0.00 40.15 3.02
4448 4881 2.202492 CGACGACGGAGCCTTCAG 60.202 66.667 0.00 0.00 35.72 3.02
4449 4882 2.182030 GACGACGGAGCCTTCAGG 59.818 66.667 0.00 0.00 38.53 3.86
4450 4883 2.282958 ACGACGGAGCCTTCAGGA 60.283 61.111 0.00 0.00 37.39 3.86
4451 4884 1.874345 GACGACGGAGCCTTCAGGAA 61.874 60.000 0.00 0.00 37.39 3.36
4452 4885 1.153745 CGACGGAGCCTTCAGGAAG 60.154 63.158 0.00 2.01 37.39 3.46
4463 4896 3.067721 CTTCAGGAAGGATACGACGTC 57.932 52.381 2.43 5.18 46.39 4.34
4464 4897 2.118313 TCAGGAAGGATACGACGTCA 57.882 50.000 17.16 0.00 46.39 4.35
4465 4898 2.439409 TCAGGAAGGATACGACGTCAA 58.561 47.619 17.16 2.88 46.39 3.18
4466 4899 2.163010 TCAGGAAGGATACGACGTCAAC 59.837 50.000 17.16 3.19 46.39 3.18
4467 4900 1.131883 AGGAAGGATACGACGTCAACG 59.868 52.381 17.16 4.83 46.39 4.10
4468 4901 1.542544 GAAGGATACGACGTCAACGG 58.457 55.000 17.16 1.08 43.46 4.44
4469 4902 0.457337 AAGGATACGACGTCAACGGC 60.457 55.000 17.16 2.42 45.58 5.68
4470 4903 1.875364 GGATACGACGTCAACGGCC 60.875 63.158 17.16 6.06 46.52 6.13
4471 4904 2.202518 ATACGACGTCAACGGCCG 60.203 61.111 26.86 26.86 46.52 6.13
4492 4925 2.359354 CCACCGTCGGCCAATCAA 60.359 61.111 12.28 0.00 0.00 2.57
4493 4926 1.969064 CCACCGTCGGCCAATCAAA 60.969 57.895 12.28 0.00 0.00 2.69
4494 4927 1.501741 CACCGTCGGCCAATCAAAG 59.498 57.895 12.28 0.00 0.00 2.77
4495 4928 1.674322 ACCGTCGGCCAATCAAAGG 60.674 57.895 12.28 0.00 0.00 3.11
4496 4929 1.376683 CCGTCGGCCAATCAAAGGA 60.377 57.895 2.24 0.00 0.00 3.36
4497 4930 1.644786 CCGTCGGCCAATCAAAGGAC 61.645 60.000 2.24 0.00 0.00 3.85
4498 4931 1.644786 CGTCGGCCAATCAAAGGACC 61.645 60.000 2.24 0.00 0.00 4.46
4499 4932 1.376683 TCGGCCAATCAAAGGACCG 60.377 57.895 2.24 0.00 42.91 4.79
4500 4933 2.406616 CGGCCAATCAAAGGACCGG 61.407 63.158 2.24 0.00 40.07 5.28
4501 4934 1.001393 GGCCAATCAAAGGACCGGA 60.001 57.895 9.46 0.00 0.00 5.14
4502 4935 1.313091 GGCCAATCAAAGGACCGGAC 61.313 60.000 9.46 0.00 0.00 4.79
4503 4936 0.608035 GCCAATCAAAGGACCGGACA 60.608 55.000 9.46 0.00 0.00 4.02
4504 4937 1.904287 CCAATCAAAGGACCGGACAA 58.096 50.000 9.46 0.00 0.00 3.18
4505 4938 1.812571 CCAATCAAAGGACCGGACAAG 59.187 52.381 9.46 0.00 0.00 3.16
4506 4939 2.504367 CAATCAAAGGACCGGACAAGT 58.496 47.619 9.46 0.00 0.00 3.16
4507 4940 2.185004 ATCAAAGGACCGGACAAGTG 57.815 50.000 9.46 0.50 0.00 3.16
4508 4941 1.124780 TCAAAGGACCGGACAAGTGA 58.875 50.000 9.46 3.29 0.00 3.41
4509 4942 1.697432 TCAAAGGACCGGACAAGTGAT 59.303 47.619 9.46 0.00 0.00 3.06
4510 4943 1.806542 CAAAGGACCGGACAAGTGATG 59.193 52.381 9.46 0.00 0.00 3.07
4512 4945 0.321671 AGGACCGGACAAGTGATGTG 59.678 55.000 9.46 0.00 44.12 3.21
4513 4946 1.298859 GGACCGGACAAGTGATGTGC 61.299 60.000 9.46 0.00 44.12 4.57
4514 4947 1.298859 GACCGGACAAGTGATGTGCC 61.299 60.000 9.46 0.00 46.76 5.01
4515 4948 2.040544 CCGGACAAGTGATGTGCCC 61.041 63.158 0.00 0.00 46.76 5.36
4516 4949 1.003355 CGGACAAGTGATGTGCCCT 60.003 57.895 0.00 0.00 46.76 5.19
4517 4950 1.300971 CGGACAAGTGATGTGCCCTG 61.301 60.000 0.00 0.00 46.76 4.45
4518 4951 0.962356 GGACAAGTGATGTGCCCTGG 60.962 60.000 0.00 0.00 43.99 4.45
4519 4952 1.589716 GACAAGTGATGTGCCCTGGC 61.590 60.000 0.00 0.00 44.12 4.85
4520 4953 2.360350 AAGTGATGTGCCCTGGCG 60.360 61.111 3.32 0.00 45.51 5.69
4532 4965 4.767255 CTGGCGCTCACACCCCTC 62.767 72.222 7.64 0.00 0.00 4.30
4534 4967 4.767255 GGCGCTCACACCCCTCTG 62.767 72.222 7.64 0.00 0.00 3.35
4535 4968 4.008933 GCGCTCACACCCCTCTGT 62.009 66.667 0.00 0.00 0.00 3.41
4536 4969 2.262915 CGCTCACACCCCTCTGTC 59.737 66.667 0.00 0.00 0.00 3.51
4537 4970 2.262915 GCTCACACCCCTCTGTCG 59.737 66.667 0.00 0.00 0.00 4.35
4538 4971 2.262915 CTCACACCCCTCTGTCGC 59.737 66.667 0.00 0.00 0.00 5.19
4539 4972 2.523168 TCACACCCCTCTGTCGCA 60.523 61.111 0.00 0.00 0.00 5.10
4540 4973 2.357517 CACACCCCTCTGTCGCAC 60.358 66.667 0.00 0.00 0.00 5.34
4541 4974 3.626924 ACACCCCTCTGTCGCACC 61.627 66.667 0.00 0.00 0.00 5.01
4542 4975 4.394712 CACCCCTCTGTCGCACCC 62.395 72.222 0.00 0.00 0.00 4.61
4543 4976 4.640690 ACCCCTCTGTCGCACCCT 62.641 66.667 0.00 0.00 0.00 4.34
4544 4977 2.363795 CCCCTCTGTCGCACCCTA 60.364 66.667 0.00 0.00 0.00 3.53
4545 4978 1.987855 CCCCTCTGTCGCACCCTAA 60.988 63.158 0.00 0.00 0.00 2.69
4546 4979 1.218316 CCCTCTGTCGCACCCTAAC 59.782 63.158 0.00 0.00 0.00 2.34
4547 4980 1.258445 CCCTCTGTCGCACCCTAACT 61.258 60.000 0.00 0.00 0.00 2.24
4548 4981 0.173708 CCTCTGTCGCACCCTAACTC 59.826 60.000 0.00 0.00 0.00 3.01
4549 4982 0.173708 CTCTGTCGCACCCTAACTCC 59.826 60.000 0.00 0.00 0.00 3.85
4550 4983 1.153823 CTGTCGCACCCTAACTCCG 60.154 63.158 0.00 0.00 0.00 4.63
4551 4984 1.874345 CTGTCGCACCCTAACTCCGT 61.874 60.000 0.00 0.00 0.00 4.69
4552 4985 1.153881 GTCGCACCCTAACTCCGTC 60.154 63.158 0.00 0.00 0.00 4.79
4553 4986 1.604308 TCGCACCCTAACTCCGTCA 60.604 57.895 0.00 0.00 0.00 4.35
4554 4987 1.180456 TCGCACCCTAACTCCGTCAA 61.180 55.000 0.00 0.00 0.00 3.18
4555 4988 1.012486 CGCACCCTAACTCCGTCAAC 61.012 60.000 0.00 0.00 0.00 3.18
4556 4989 0.672711 GCACCCTAACTCCGTCAACC 60.673 60.000 0.00 0.00 0.00 3.77
4557 4990 0.682852 CACCCTAACTCCGTCAACCA 59.317 55.000 0.00 0.00 0.00 3.67
4558 4991 0.683412 ACCCTAACTCCGTCAACCAC 59.317 55.000 0.00 0.00 0.00 4.16
4559 4992 0.682852 CCCTAACTCCGTCAACCACA 59.317 55.000 0.00 0.00 0.00 4.17
4560 4993 1.607251 CCCTAACTCCGTCAACCACAC 60.607 57.143 0.00 0.00 0.00 3.82
4561 4994 1.607251 CCTAACTCCGTCAACCACACC 60.607 57.143 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
215 224 2.765699 TGTTTTTGGGCTGCTTCTCTTT 59.234 40.909 0.00 0.00 0.00 2.52
281 290 0.312416 GGTTTGTTGTGCCACGCATA 59.688 50.000 0.00 0.00 41.91 3.14
354 363 2.262915 CTGACTCCACCGACTGGC 59.737 66.667 0.00 0.00 40.39 4.85
355 364 1.290324 CACTGACTCCACCGACTGG 59.710 63.158 0.00 0.00 42.29 4.00
369 378 1.067071 GGGAACGTTCCTACTCCACTG 60.067 57.143 38.59 0.00 46.72 3.66
370 379 1.264295 GGGAACGTTCCTACTCCACT 58.736 55.000 38.59 0.00 46.72 4.00
421 432 6.840780 AGCAAAGCAAGTTGGTCTAATAAT 57.159 33.333 8.24 0.00 34.15 1.28
422 433 6.648879 AAGCAAAGCAAGTTGGTCTAATAA 57.351 33.333 8.24 0.00 38.23 1.40
423 434 6.446318 CAAAGCAAAGCAAGTTGGTCTAATA 58.554 36.000 8.24 0.00 38.23 0.98
504 706 1.034838 TGCATACGCATGTTTCCCCC 61.035 55.000 0.00 0.00 45.36 5.40
516 718 0.250295 AATCGACCCCCATGCATACG 60.250 55.000 0.00 0.00 0.00 3.06
517 719 1.880027 GAAATCGACCCCCATGCATAC 59.120 52.381 0.00 0.00 0.00 2.39
518 720 1.774254 AGAAATCGACCCCCATGCATA 59.226 47.619 0.00 0.00 0.00 3.14
519 721 0.552848 AGAAATCGACCCCCATGCAT 59.447 50.000 0.00 0.00 0.00 3.96
520 722 0.331278 AAGAAATCGACCCCCATGCA 59.669 50.000 0.00 0.00 0.00 3.96
521 723 1.474330 AAAGAAATCGACCCCCATGC 58.526 50.000 0.00 0.00 0.00 4.06
522 724 2.427095 GGAAAAGAAATCGACCCCCATG 59.573 50.000 0.00 0.00 0.00 3.66
523 725 2.735151 GGAAAAGAAATCGACCCCCAT 58.265 47.619 0.00 0.00 0.00 4.00
524 726 1.612199 CGGAAAAGAAATCGACCCCCA 60.612 52.381 0.00 0.00 0.00 4.96
525 727 1.092348 CGGAAAAGAAATCGACCCCC 58.908 55.000 0.00 0.00 0.00 5.40
526 728 2.103537 TCGGAAAAGAAATCGACCCC 57.896 50.000 0.00 0.00 0.00 4.95
529 731 3.267483 TGGGATCGGAAAAGAAATCGAC 58.733 45.455 0.00 0.00 34.40 4.20
532 734 5.582689 AACATGGGATCGGAAAAGAAATC 57.417 39.130 0.00 0.00 0.00 2.17
543 745 2.135139 CGGTGACATAACATGGGATCG 58.865 52.381 0.00 0.00 33.60 3.69
604 806 3.697542 GCTGGGTTTGGTACGGAATATTT 59.302 43.478 0.00 0.00 0.00 1.40
664 866 6.575201 CGTTCCGAAAGAGAGAAAGAAAAATG 59.425 38.462 0.00 0.00 0.00 2.32
689 896 1.962822 GTGTTCCGTTCCCGTTCCC 60.963 63.158 0.00 0.00 0.00 3.97
690 897 2.312436 CGTGTTCCGTTCCCGTTCC 61.312 63.158 0.00 0.00 0.00 3.62
691 898 0.668401 ATCGTGTTCCGTTCCCGTTC 60.668 55.000 0.00 0.00 37.94 3.95
692 899 0.249996 AATCGTGTTCCGTTCCCGTT 60.250 50.000 0.00 0.00 37.94 4.44
693 900 0.947180 CAATCGTGTTCCGTTCCCGT 60.947 55.000 0.00 0.00 37.94 5.28
694 901 1.632046 CCAATCGTGTTCCGTTCCCG 61.632 60.000 0.00 0.00 37.94 5.14
840 1065 2.277404 GAGGAGAGGAGGGACGCT 59.723 66.667 0.00 0.00 0.00 5.07
1311 1555 0.956633 CAGAGGAAGCAAGCAAGCAA 59.043 50.000 3.19 0.00 36.85 3.91
1312 1556 1.521450 GCAGAGGAAGCAAGCAAGCA 61.521 55.000 3.19 0.00 36.85 3.91
1313 1557 1.212229 GCAGAGGAAGCAAGCAAGC 59.788 57.895 0.00 0.00 0.00 4.01
1314 1558 0.608582 AGGCAGAGGAAGCAAGCAAG 60.609 55.000 0.00 0.00 0.00 4.01
1315 1559 0.607489 GAGGCAGAGGAAGCAAGCAA 60.607 55.000 0.00 0.00 0.00 3.91
1643 1890 4.400529 TCACAATCCAGCACGTATATGT 57.599 40.909 0.00 0.00 0.00 2.29
1877 2153 4.112634 GACAGCGAGCAAACAGATATGTA 58.887 43.478 0.00 0.00 0.00 2.29
2171 2460 1.168714 GGAGCATGAACTGGACAACC 58.831 55.000 0.00 0.00 0.00 3.77
2214 2505 4.217550 GCTATGGCAAAAGTTGAGGTGTTA 59.782 41.667 0.00 0.00 38.54 2.41
2247 2544 5.035443 GCAAATCACTGAATTCTGATGCTC 58.965 41.667 18.13 4.22 0.00 4.26
2282 2579 8.046708 ACACCAGTAAGAAGATATGCATACAAA 58.953 33.333 8.99 0.00 0.00 2.83
2295 2595 8.251721 AGTAATTAGTAGCACACCAGTAAGAAG 58.748 37.037 0.00 0.00 0.00 2.85
2305 2605 6.034683 GCACACTACAGTAATTAGTAGCACAC 59.965 42.308 10.36 0.00 41.01 3.82
2731 3127 0.591170 CGGGCAGGTTGTGTAAGTTG 59.409 55.000 0.00 0.00 0.00 3.16
2878 3274 3.537580 ACACGTGTTTACAGTTCATGGT 58.462 40.909 17.22 0.00 0.00 3.55
2956 3353 2.719426 AGCAAGCAAACAGATGAAGC 57.281 45.000 0.00 0.00 0.00 3.86
3051 3455 7.415989 CGCTACCATCCAGTACTCTAAACTAAA 60.416 40.741 0.00 0.00 0.00 1.85
3173 3585 1.740025 GCATGCCCTGAGAAAGTACAC 59.260 52.381 6.36 0.00 0.00 2.90
3196 3612 1.747355 CCAGCAAGATTAGGTTGGCAG 59.253 52.381 0.00 0.00 0.00 4.85
3239 3655 6.085555 TCTGCATACTTCCGATTTAGTAGG 57.914 41.667 0.00 0.00 33.17 3.18
3280 3697 1.555477 CCCCCTGCATTGTGCCATTT 61.555 55.000 0.00 0.00 44.23 2.32
3435 3852 1.961277 GGTCGTTGGGTCAGCACAG 60.961 63.158 0.00 0.00 0.00 3.66
3585 4002 3.313803 TGCTATTCTCAGACGCTCTACAG 59.686 47.826 0.00 0.00 0.00 2.74
3847 4272 3.017265 AGGCAAAAGAAAACGATGCAG 57.983 42.857 0.00 0.00 38.73 4.41
3853 4278 6.302313 CGTATACAAGAAGGCAAAAGAAAACG 59.698 38.462 3.32 0.00 0.00 3.60
3859 4284 5.408604 AGACACGTATACAAGAAGGCAAAAG 59.591 40.000 3.32 0.00 0.00 2.27
3862 4287 4.021807 TGAGACACGTATACAAGAAGGCAA 60.022 41.667 3.32 0.00 0.00 4.52
3863 4288 3.508402 TGAGACACGTATACAAGAAGGCA 59.492 43.478 3.32 0.00 0.00 4.75
3864 4289 4.106029 TGAGACACGTATACAAGAAGGC 57.894 45.455 3.32 0.00 0.00 4.35
3866 4291 6.036083 CCCAAATGAGACACGTATACAAGAAG 59.964 42.308 3.32 0.00 0.00 2.85
3867 4292 5.872617 CCCAAATGAGACACGTATACAAGAA 59.127 40.000 3.32 0.00 0.00 2.52
3868 4293 5.186215 TCCCAAATGAGACACGTATACAAGA 59.814 40.000 3.32 0.00 0.00 3.02
3869 4294 5.291128 GTCCCAAATGAGACACGTATACAAG 59.709 44.000 3.32 0.00 33.08 3.16
3870 4295 5.172934 GTCCCAAATGAGACACGTATACAA 58.827 41.667 3.32 0.00 33.08 2.41
3871 4296 4.221041 TGTCCCAAATGAGACACGTATACA 59.779 41.667 3.32 0.00 38.07 2.29
3877 4302 2.069273 GTCTGTCCCAAATGAGACACG 58.931 52.381 0.00 0.00 38.07 4.49
3885 4310 6.245408 TGTATTTGCTTAGTCTGTCCCAAAT 58.755 36.000 0.00 0.00 36.94 2.32
3887 4312 5.235850 TGTATTTGCTTAGTCTGTCCCAA 57.764 39.130 0.00 0.00 0.00 4.12
3910 4335 5.911378 TGTGCATAATATGGTTTTCAGCA 57.089 34.783 2.13 0.00 34.07 4.41
3923 4348 0.466007 TCGGCAGCCATGTGCATAAT 60.466 50.000 13.30 0.00 45.93 1.28
3939 4364 1.334689 GCGAGTGAAACCCTTTTTCGG 60.335 52.381 0.00 0.00 37.80 4.30
3942 4367 5.784578 ATAAAGCGAGTGAAACCCTTTTT 57.215 34.783 0.00 0.00 37.80 1.94
3977 4402 9.579768 TTTTGTATCGGTTTTAATTGATGATGG 57.420 29.630 0.00 0.00 0.00 3.51
3983 4408 7.096558 GCGTGTTTTTGTATCGGTTTTAATTGA 60.097 33.333 0.00 0.00 0.00 2.57
4008 4441 1.312371 ATATTGTGTGCGGTGGTGGC 61.312 55.000 0.00 0.00 0.00 5.01
4022 4455 7.984422 TGTATCTTGCCTTGGATGTATATTG 57.016 36.000 0.00 0.00 0.00 1.90
4025 4458 6.998074 CCTTTGTATCTTGCCTTGGATGTATA 59.002 38.462 0.00 0.00 0.00 1.47
4027 4460 5.192927 CCTTTGTATCTTGCCTTGGATGTA 58.807 41.667 0.00 0.00 0.00 2.29
4030 4463 3.635591 CCCTTTGTATCTTGCCTTGGAT 58.364 45.455 0.00 0.00 0.00 3.41
4031 4464 2.883888 GCCCTTTGTATCTTGCCTTGGA 60.884 50.000 0.00 0.00 0.00 3.53
4038 4471 1.384222 GCCCGGCCCTTTGTATCTTG 61.384 60.000 0.00 0.00 0.00 3.02
4040 4473 2.305607 TGCCCGGCCCTTTGTATCT 61.306 57.895 7.03 0.00 0.00 1.98
4041 4474 2.119029 GTGCCCGGCCCTTTGTATC 61.119 63.158 7.03 0.00 0.00 2.24
4060 4493 0.186386 TTGGTTTTCGATGGGGTGGT 59.814 50.000 0.00 0.00 0.00 4.16
4069 4502 1.473278 ACGGTTTTGCTTGGTTTTCGA 59.527 42.857 0.00 0.00 0.00 3.71
4077 4510 1.208259 GCTCCAAACGGTTTTGCTTG 58.792 50.000 2.79 0.00 40.84 4.01
4100 4533 0.876342 GTCCGGCTCGCCTCTTTATG 60.876 60.000 6.35 0.00 0.00 1.90
4104 4537 3.311110 TTGTCCGGCTCGCCTCTT 61.311 61.111 6.35 0.00 0.00 2.85
4110 4543 1.886861 CTTCGTTGTTGTCCGGCTCG 61.887 60.000 0.00 0.00 0.00 5.03
4125 4558 2.032030 CCGTTTTATAGGCATGGCTTCG 60.032 50.000 28.30 19.34 0.00 3.79
4134 4567 1.306148 GGAGGCACCGTTTTATAGGC 58.694 55.000 0.00 0.00 0.00 3.93
4135 4568 1.210967 TGGGAGGCACCGTTTTATAGG 59.789 52.381 0.00 0.00 40.11 2.57
4137 4570 2.189676 TCTGGGAGGCACCGTTTTATA 58.810 47.619 0.00 0.00 40.11 0.98
4139 4572 0.766131 TTCTGGGAGGCACCGTTTTA 59.234 50.000 0.00 0.00 40.11 1.52
4141 4574 1.073199 CTTCTGGGAGGCACCGTTT 59.927 57.895 0.00 0.00 40.11 3.60
4142 4575 2.750350 CTTCTGGGAGGCACCGTT 59.250 61.111 0.00 0.00 40.11 4.44
4143 4576 3.322466 CCTTCTGGGAGGCACCGT 61.322 66.667 0.00 0.00 40.11 4.83
4180 4613 2.043752 TACTGGATCGGGCGGTGA 60.044 61.111 0.00 0.00 0.00 4.02
4193 4626 7.121974 ACGATTTTCTCAACAATGTCTACTG 57.878 36.000 0.00 0.00 0.00 2.74
4194 4627 7.730364 AACGATTTTCTCAACAATGTCTACT 57.270 32.000 0.00 0.00 0.00 2.57
4195 4628 9.314501 GTTAACGATTTTCTCAACAATGTCTAC 57.685 33.333 0.00 0.00 0.00 2.59
4196 4629 9.268268 AGTTAACGATTTTCTCAACAATGTCTA 57.732 29.630 0.00 0.00 0.00 2.59
4197 4630 8.070171 CAGTTAACGATTTTCTCAACAATGTCT 58.930 33.333 0.00 0.00 0.00 3.41
4198 4631 7.323656 CCAGTTAACGATTTTCTCAACAATGTC 59.676 37.037 0.00 0.00 0.00 3.06
4199 4632 7.138736 CCAGTTAACGATTTTCTCAACAATGT 58.861 34.615 0.00 0.00 0.00 2.71
4200 4633 7.138736 ACCAGTTAACGATTTTCTCAACAATG 58.861 34.615 0.00 0.00 0.00 2.82
4201 4634 7.272037 ACCAGTTAACGATTTTCTCAACAAT 57.728 32.000 0.00 0.00 0.00 2.71
4202 4635 6.687081 ACCAGTTAACGATTTTCTCAACAA 57.313 33.333 0.00 0.00 0.00 2.83
4203 4636 6.203338 GGTACCAGTTAACGATTTTCTCAACA 59.797 38.462 7.15 0.00 0.00 3.33
4204 4637 6.426025 AGGTACCAGTTAACGATTTTCTCAAC 59.574 38.462 15.94 0.00 0.00 3.18
4205 4638 6.425721 CAGGTACCAGTTAACGATTTTCTCAA 59.574 38.462 15.94 0.00 0.00 3.02
4206 4639 5.929992 CAGGTACCAGTTAACGATTTTCTCA 59.070 40.000 15.94 0.00 0.00 3.27
4207 4640 5.163884 GCAGGTACCAGTTAACGATTTTCTC 60.164 44.000 15.94 0.00 0.00 2.87
4208 4641 4.694037 GCAGGTACCAGTTAACGATTTTCT 59.306 41.667 15.94 0.00 0.00 2.52
4209 4642 4.694037 AGCAGGTACCAGTTAACGATTTTC 59.306 41.667 15.94 0.00 0.00 2.29
4210 4643 4.648651 AGCAGGTACCAGTTAACGATTTT 58.351 39.130 15.94 0.00 0.00 1.82
4211 4644 4.251268 GAGCAGGTACCAGTTAACGATTT 58.749 43.478 15.94 0.00 0.00 2.17
4212 4645 3.675228 CGAGCAGGTACCAGTTAACGATT 60.675 47.826 15.94 0.00 0.00 3.34
4213 4646 2.159282 CGAGCAGGTACCAGTTAACGAT 60.159 50.000 15.94 0.00 0.00 3.73
4214 4647 1.200716 CGAGCAGGTACCAGTTAACGA 59.799 52.381 15.94 0.00 0.00 3.85
4215 4648 1.625616 CGAGCAGGTACCAGTTAACG 58.374 55.000 15.94 8.12 0.00 3.18
4216 4649 2.005971 CCGAGCAGGTACCAGTTAAC 57.994 55.000 15.94 0.00 34.51 2.01
4232 4665 2.992689 TACTCGCCAGCCAACCGA 60.993 61.111 0.00 0.00 0.00 4.69
4233 4666 2.509336 CTACTCGCCAGCCAACCG 60.509 66.667 0.00 0.00 0.00 4.44
4234 4667 2.125106 CCTACTCGCCAGCCAACC 60.125 66.667 0.00 0.00 0.00 3.77
4235 4668 2.125106 CCCTACTCGCCAGCCAAC 60.125 66.667 0.00 0.00 0.00 3.77
4236 4669 3.399181 CCCCTACTCGCCAGCCAA 61.399 66.667 0.00 0.00 0.00 4.52
4237 4670 3.696518 ATCCCCTACTCGCCAGCCA 62.697 63.158 0.00 0.00 0.00 4.75
4238 4671 1.119574 TAATCCCCTACTCGCCAGCC 61.120 60.000 0.00 0.00 0.00 4.85
4239 4672 0.756903 TTAATCCCCTACTCGCCAGC 59.243 55.000 0.00 0.00 0.00 4.85
4240 4673 3.195825 CCTATTAATCCCCTACTCGCCAG 59.804 52.174 0.00 0.00 0.00 4.85
4241 4674 3.170717 CCTATTAATCCCCTACTCGCCA 58.829 50.000 0.00 0.00 0.00 5.69
4242 4675 2.093606 GCCTATTAATCCCCTACTCGCC 60.094 54.545 0.00 0.00 0.00 5.54
4243 4676 2.832733 AGCCTATTAATCCCCTACTCGC 59.167 50.000 0.00 0.00 0.00 5.03
4244 4677 6.459848 CGATTAGCCTATTAATCCCCTACTCG 60.460 46.154 0.00 3.50 36.93 4.18
4245 4678 6.183360 CCGATTAGCCTATTAATCCCCTACTC 60.183 46.154 0.00 0.00 36.93 2.59
4246 4679 5.661759 CCGATTAGCCTATTAATCCCCTACT 59.338 44.000 0.00 0.00 36.93 2.57
4247 4680 5.684291 GCCGATTAGCCTATTAATCCCCTAC 60.684 48.000 0.00 0.00 36.93 3.18
4248 4681 4.407945 GCCGATTAGCCTATTAATCCCCTA 59.592 45.833 0.00 0.00 36.93 3.53
4249 4682 3.200165 GCCGATTAGCCTATTAATCCCCT 59.800 47.826 0.00 0.00 36.93 4.79
4250 4683 3.542648 GCCGATTAGCCTATTAATCCCC 58.457 50.000 0.00 0.00 36.93 4.81
4262 4695 5.376854 AATTGATTACATGGCCGATTAGC 57.623 39.130 0.00 0.00 0.00 3.09
4263 4696 8.950210 AGATTAATTGATTACATGGCCGATTAG 58.050 33.333 0.00 0.00 0.00 1.73
4264 4697 8.729756 CAGATTAATTGATTACATGGCCGATTA 58.270 33.333 0.00 0.00 0.00 1.75
4265 4698 7.448161 TCAGATTAATTGATTACATGGCCGATT 59.552 33.333 0.00 0.00 0.00 3.34
4266 4699 6.942005 TCAGATTAATTGATTACATGGCCGAT 59.058 34.615 0.00 0.00 0.00 4.18
4267 4700 6.204688 GTCAGATTAATTGATTACATGGCCGA 59.795 38.462 0.00 0.00 0.00 5.54
4268 4701 6.373779 GTCAGATTAATTGATTACATGGCCG 58.626 40.000 0.00 0.00 0.00 6.13
4269 4702 6.204688 TCGTCAGATTAATTGATTACATGGCC 59.795 38.462 0.00 0.00 0.00 5.36
4270 4703 7.189693 TCGTCAGATTAATTGATTACATGGC 57.810 36.000 0.00 0.00 0.00 4.40
4284 4717 9.406828 CCGATAAACTGATAAATCGTCAGATTA 57.593 33.333 9.86 8.74 45.66 1.75
4286 4719 6.366332 GCCGATAAACTGATAAATCGTCAGAT 59.634 38.462 9.86 0.00 44.57 2.90
4287 4720 5.690409 GCCGATAAACTGATAAATCGTCAGA 59.310 40.000 9.86 0.00 44.57 3.27
4288 4721 5.692204 AGCCGATAAACTGATAAATCGTCAG 59.308 40.000 1.85 1.85 46.60 3.51
4289 4722 5.597806 AGCCGATAAACTGATAAATCGTCA 58.402 37.500 0.00 0.00 39.58 4.35
4290 4723 6.862090 AGTAGCCGATAAACTGATAAATCGTC 59.138 38.462 0.00 0.00 39.58 4.20
4291 4724 6.746120 AGTAGCCGATAAACTGATAAATCGT 58.254 36.000 0.00 0.00 39.58 3.73
4292 4725 6.032565 CGAGTAGCCGATAAACTGATAAATCG 59.967 42.308 0.00 0.00 40.60 3.34
4293 4726 6.308282 CCGAGTAGCCGATAAACTGATAAATC 59.692 42.308 0.00 0.00 0.00 2.17
4294 4727 6.157211 CCGAGTAGCCGATAAACTGATAAAT 58.843 40.000 0.00 0.00 0.00 1.40
4295 4728 5.068198 ACCGAGTAGCCGATAAACTGATAAA 59.932 40.000 0.00 0.00 0.00 1.40
4296 4729 4.581824 ACCGAGTAGCCGATAAACTGATAA 59.418 41.667 0.00 0.00 0.00 1.75
4297 4730 4.023450 CACCGAGTAGCCGATAAACTGATA 60.023 45.833 0.00 0.00 0.00 2.15
4298 4731 2.957006 ACCGAGTAGCCGATAAACTGAT 59.043 45.455 0.00 0.00 0.00 2.90
4299 4732 2.098607 CACCGAGTAGCCGATAAACTGA 59.901 50.000 0.00 0.00 0.00 3.41
4300 4733 2.098607 TCACCGAGTAGCCGATAAACTG 59.901 50.000 0.00 0.00 0.00 3.16
4301 4734 2.098770 GTCACCGAGTAGCCGATAAACT 59.901 50.000 0.00 0.00 0.00 2.66
4302 4735 2.457970 GTCACCGAGTAGCCGATAAAC 58.542 52.381 0.00 0.00 0.00 2.01
4303 4736 1.406539 GGTCACCGAGTAGCCGATAAA 59.593 52.381 0.00 0.00 0.00 1.40
4304 4737 1.027357 GGTCACCGAGTAGCCGATAA 58.973 55.000 0.00 0.00 0.00 1.75
4305 4738 0.820891 GGGTCACCGAGTAGCCGATA 60.821 60.000 0.00 0.00 0.00 2.92
4306 4739 2.125961 GGGTCACCGAGTAGCCGAT 61.126 63.158 0.00 0.00 0.00 4.18
4307 4740 2.753043 GGGTCACCGAGTAGCCGA 60.753 66.667 0.00 0.00 0.00 5.54
4308 4741 1.956629 ATTGGGTCACCGAGTAGCCG 61.957 60.000 0.00 0.00 40.75 5.52
4309 4742 0.462047 CATTGGGTCACCGAGTAGCC 60.462 60.000 0.00 0.00 40.75 3.93
4310 4743 0.535335 TCATTGGGTCACCGAGTAGC 59.465 55.000 0.00 0.00 40.75 3.58
4311 4744 1.825474 ACTCATTGGGTCACCGAGTAG 59.175 52.381 0.48 0.00 40.75 2.57
4312 4745 1.933021 ACTCATTGGGTCACCGAGTA 58.067 50.000 0.48 0.00 40.75 2.59
4313 4746 1.825474 CTACTCATTGGGTCACCGAGT 59.175 52.381 7.23 7.23 40.75 4.18
4314 4747 1.137086 CCTACTCATTGGGTCACCGAG 59.863 57.143 0.00 0.00 40.75 4.63
4315 4748 1.191535 CCTACTCATTGGGTCACCGA 58.808 55.000 0.00 0.00 40.75 4.69
4316 4749 0.178068 CCCTACTCATTGGGTCACCG 59.822 60.000 0.00 0.00 40.75 4.94
4317 4750 1.580059 TCCCTACTCATTGGGTCACC 58.420 55.000 0.00 0.00 43.74 4.02
4318 4751 3.933861 AATCCCTACTCATTGGGTCAC 57.066 47.619 0.00 0.00 43.74 3.67
4319 4752 5.221641 CGATTAATCCCTACTCATTGGGTCA 60.222 44.000 9.87 0.00 43.74 4.02
4320 4753 5.011738 TCGATTAATCCCTACTCATTGGGTC 59.988 44.000 9.87 0.00 43.74 4.46
4321 4754 4.905456 TCGATTAATCCCTACTCATTGGGT 59.095 41.667 9.87 0.00 43.74 4.51
4322 4755 5.221641 TGTCGATTAATCCCTACTCATTGGG 60.222 44.000 9.87 0.00 44.66 4.12
4323 4756 5.853936 TGTCGATTAATCCCTACTCATTGG 58.146 41.667 9.87 0.00 0.00 3.16
4324 4757 7.969536 ATTGTCGATTAATCCCTACTCATTG 57.030 36.000 9.87 0.00 0.00 2.82
4325 4758 8.980481 AAATTGTCGATTAATCCCTACTCATT 57.020 30.769 9.87 6.28 0.00 2.57
4327 4760 9.321562 GTTAAATTGTCGATTAATCCCTACTCA 57.678 33.333 9.87 0.00 0.00 3.41
4328 4761 9.543783 AGTTAAATTGTCGATTAATCCCTACTC 57.456 33.333 9.87 0.00 0.00 2.59
4329 4762 9.326413 CAGTTAAATTGTCGATTAATCCCTACT 57.674 33.333 9.87 0.00 0.00 2.57
4330 4763 8.557029 CCAGTTAAATTGTCGATTAATCCCTAC 58.443 37.037 9.87 6.59 0.00 3.18
4331 4764 8.269317 ACCAGTTAAATTGTCGATTAATCCCTA 58.731 33.333 9.87 0.00 0.00 3.53
4332 4765 7.116736 ACCAGTTAAATTGTCGATTAATCCCT 58.883 34.615 9.87 0.00 0.00 4.20
4333 4766 7.329588 ACCAGTTAAATTGTCGATTAATCCC 57.670 36.000 9.87 1.75 0.00 3.85
4337 4770 9.976255 CGATTAACCAGTTAAATTGTCGATTAA 57.024 29.630 14.38 0.00 36.62 1.40
4338 4771 8.605746 CCGATTAACCAGTTAAATTGTCGATTA 58.394 33.333 18.51 0.00 36.62 1.75
4339 4772 7.334921 TCCGATTAACCAGTTAAATTGTCGATT 59.665 33.333 18.51 0.00 36.62 3.34
4340 4773 6.819649 TCCGATTAACCAGTTAAATTGTCGAT 59.180 34.615 18.51 0.00 36.62 3.59
4341 4774 6.091169 GTCCGATTAACCAGTTAAATTGTCGA 59.909 38.462 18.51 7.96 36.62 4.20
4342 4775 6.245724 GTCCGATTAACCAGTTAAATTGTCG 58.754 40.000 13.29 13.29 38.38 4.35
4343 4776 6.091169 TCGTCCGATTAACCAGTTAAATTGTC 59.909 38.462 7.05 0.49 38.38 3.18
4344 4777 5.933463 TCGTCCGATTAACCAGTTAAATTGT 59.067 36.000 7.05 0.00 38.38 2.71
4345 4778 6.411630 TCGTCCGATTAACCAGTTAAATTG 57.588 37.500 7.05 1.24 38.38 2.32
4346 4779 7.619964 ATTCGTCCGATTAACCAGTTAAATT 57.380 32.000 7.05 0.00 38.38 1.82
4347 4780 7.551617 AGAATTCGTCCGATTAACCAGTTAAAT 59.448 33.333 7.05 0.00 38.38 1.40
4348 4781 6.875195 AGAATTCGTCCGATTAACCAGTTAAA 59.125 34.615 7.05 0.00 38.38 1.52
4349 4782 6.400568 AGAATTCGTCCGATTAACCAGTTAA 58.599 36.000 5.51 5.51 39.12 2.01
4350 4783 5.969423 AGAATTCGTCCGATTAACCAGTTA 58.031 37.500 0.00 0.00 0.00 2.24
4351 4784 4.828829 AGAATTCGTCCGATTAACCAGTT 58.171 39.130 0.00 0.00 0.00 3.16
4352 4785 4.467198 AGAATTCGTCCGATTAACCAGT 57.533 40.909 0.00 0.00 0.00 4.00
4353 4786 4.868171 TCAAGAATTCGTCCGATTAACCAG 59.132 41.667 0.00 0.00 0.00 4.00
4354 4787 4.823157 TCAAGAATTCGTCCGATTAACCA 58.177 39.130 0.00 0.00 0.00 3.67
4355 4788 5.121142 TGTTCAAGAATTCGTCCGATTAACC 59.879 40.000 0.00 0.00 0.00 2.85
4356 4789 6.160664 TGTTCAAGAATTCGTCCGATTAAC 57.839 37.500 0.00 0.00 0.00 2.01
4357 4790 5.350365 CCTGTTCAAGAATTCGTCCGATTAA 59.650 40.000 0.00 0.00 0.00 1.40
4358 4791 4.868171 CCTGTTCAAGAATTCGTCCGATTA 59.132 41.667 0.00 0.00 0.00 1.75
4359 4792 3.684788 CCTGTTCAAGAATTCGTCCGATT 59.315 43.478 0.00 0.00 0.00 3.34
4360 4793 3.262420 CCTGTTCAAGAATTCGTCCGAT 58.738 45.455 0.00 0.00 0.00 4.18
4361 4794 2.611971 CCCTGTTCAAGAATTCGTCCGA 60.612 50.000 0.00 0.00 0.00 4.55
4362 4795 1.732259 CCCTGTTCAAGAATTCGTCCG 59.268 52.381 0.00 0.00 0.00 4.79
4363 4796 1.468914 GCCCTGTTCAAGAATTCGTCC 59.531 52.381 0.00 0.00 0.00 4.79
4364 4797 1.468914 GGCCCTGTTCAAGAATTCGTC 59.531 52.381 0.00 0.00 0.00 4.20
4365 4798 1.202879 TGGCCCTGTTCAAGAATTCGT 60.203 47.619 0.00 0.00 0.00 3.85
4366 4799 1.470098 CTGGCCCTGTTCAAGAATTCG 59.530 52.381 0.00 0.00 0.00 3.34
4367 4800 2.519013 ACTGGCCCTGTTCAAGAATTC 58.481 47.619 0.00 0.00 0.00 2.17
4368 4801 2.683211 ACTGGCCCTGTTCAAGAATT 57.317 45.000 0.00 0.00 0.00 2.17
4369 4802 2.912956 TCTACTGGCCCTGTTCAAGAAT 59.087 45.455 0.00 0.00 0.00 2.40
4370 4803 2.334977 TCTACTGGCCCTGTTCAAGAA 58.665 47.619 0.00 0.00 0.00 2.52
4371 4804 2.024176 TCTACTGGCCCTGTTCAAGA 57.976 50.000 0.00 0.00 0.00 3.02
4372 4805 2.237143 TGATCTACTGGCCCTGTTCAAG 59.763 50.000 0.00 0.00 0.00 3.02
4373 4806 2.265367 TGATCTACTGGCCCTGTTCAA 58.735 47.619 0.00 0.00 0.00 2.69
4374 4807 1.951209 TGATCTACTGGCCCTGTTCA 58.049 50.000 0.00 0.00 0.00 3.18
4375 4808 2.171448 ACATGATCTACTGGCCCTGTTC 59.829 50.000 0.00 0.00 0.00 3.18
4376 4809 2.200081 ACATGATCTACTGGCCCTGTT 58.800 47.619 0.00 0.00 0.00 3.16
4377 4810 1.885049 ACATGATCTACTGGCCCTGT 58.115 50.000 0.00 1.24 0.00 4.00
4378 4811 3.287867 AAACATGATCTACTGGCCCTG 57.712 47.619 0.00 0.00 0.00 4.45
4379 4812 3.266772 TGAAAACATGATCTACTGGCCCT 59.733 43.478 0.00 0.00 0.00 5.19
4380 4813 3.378427 GTGAAAACATGATCTACTGGCCC 59.622 47.826 0.00 0.00 0.00 5.80
4381 4814 3.378427 GGTGAAAACATGATCTACTGGCC 59.622 47.826 0.00 0.00 0.00 5.36
4382 4815 4.095483 CAGGTGAAAACATGATCTACTGGC 59.905 45.833 0.00 0.00 0.00 4.85
4383 4816 4.637534 CCAGGTGAAAACATGATCTACTGG 59.362 45.833 0.00 11.87 35.47 4.00
4384 4817 5.491070 TCCAGGTGAAAACATGATCTACTG 58.509 41.667 0.00 7.38 0.00 2.74
4385 4818 5.738909 CTCCAGGTGAAAACATGATCTACT 58.261 41.667 0.00 0.00 0.00 2.57
4386 4819 4.333926 GCTCCAGGTGAAAACATGATCTAC 59.666 45.833 0.00 0.00 0.00 2.59
4387 4820 4.019411 TGCTCCAGGTGAAAACATGATCTA 60.019 41.667 0.00 0.00 0.00 1.98
4388 4821 3.245016 TGCTCCAGGTGAAAACATGATCT 60.245 43.478 0.00 0.00 0.00 2.75
4389 4822 3.084039 TGCTCCAGGTGAAAACATGATC 58.916 45.455 0.00 0.00 0.00 2.92
4390 4823 3.159213 TGCTCCAGGTGAAAACATGAT 57.841 42.857 0.00 0.00 0.00 2.45
4391 4824 2.655090 TGCTCCAGGTGAAAACATGA 57.345 45.000 0.00 0.00 0.00 3.07
4392 4825 3.731652 TTTGCTCCAGGTGAAAACATG 57.268 42.857 0.00 0.00 0.00 3.21
4393 4826 3.490761 CGTTTTGCTCCAGGTGAAAACAT 60.491 43.478 18.85 0.00 37.90 2.71
4394 4827 2.159310 CGTTTTGCTCCAGGTGAAAACA 60.159 45.455 18.85 3.28 37.90 2.83
4395 4828 2.098443 TCGTTTTGCTCCAGGTGAAAAC 59.902 45.455 13.70 13.70 35.75 2.43
4396 4829 2.098443 GTCGTTTTGCTCCAGGTGAAAA 59.902 45.455 0.00 0.00 0.00 2.29
4397 4830 1.673920 GTCGTTTTGCTCCAGGTGAAA 59.326 47.619 0.00 0.00 0.00 2.69
4398 4831 1.305201 GTCGTTTTGCTCCAGGTGAA 58.695 50.000 0.00 0.00 0.00 3.18
4399 4832 0.179234 TGTCGTTTTGCTCCAGGTGA 59.821 50.000 0.00 0.00 0.00 4.02
4400 4833 0.588252 CTGTCGTTTTGCTCCAGGTG 59.412 55.000 0.00 0.00 0.00 4.00
4401 4834 0.535102 CCTGTCGTTTTGCTCCAGGT 60.535 55.000 0.00 0.00 38.28 4.00
4402 4835 0.250295 TCCTGTCGTTTTGCTCCAGG 60.250 55.000 0.00 0.00 43.26 4.45
4403 4836 1.151668 CTCCTGTCGTTTTGCTCCAG 58.848 55.000 0.00 0.00 0.00 3.86
4404 4837 0.468226 ACTCCTGTCGTTTTGCTCCA 59.532 50.000 0.00 0.00 0.00 3.86
4405 4838 0.868406 CACTCCTGTCGTTTTGCTCC 59.132 55.000 0.00 0.00 0.00 4.70
4406 4839 1.261619 CACACTCCTGTCGTTTTGCTC 59.738 52.381 0.00 0.00 0.00 4.26
4407 4840 1.134521 TCACACTCCTGTCGTTTTGCT 60.135 47.619 0.00 0.00 0.00 3.91
4408 4841 1.295792 TCACACTCCTGTCGTTTTGC 58.704 50.000 0.00 0.00 0.00 3.68
4409 4842 3.849645 GCATTCACACTCCTGTCGTTTTG 60.850 47.826 0.00 0.00 0.00 2.44
4410 4843 2.290641 GCATTCACACTCCTGTCGTTTT 59.709 45.455 0.00 0.00 0.00 2.43
4411 4844 1.873591 GCATTCACACTCCTGTCGTTT 59.126 47.619 0.00 0.00 0.00 3.60
4412 4845 1.512926 GCATTCACACTCCTGTCGTT 58.487 50.000 0.00 0.00 0.00 3.85
4413 4846 0.667487 CGCATTCACACTCCTGTCGT 60.667 55.000 0.00 0.00 0.00 4.34
4414 4847 0.388520 TCGCATTCACACTCCTGTCG 60.389 55.000 0.00 0.00 0.00 4.35
4415 4848 1.071605 GTCGCATTCACACTCCTGTC 58.928 55.000 0.00 0.00 0.00 3.51
4416 4849 0.667487 CGTCGCATTCACACTCCTGT 60.667 55.000 0.00 0.00 0.00 4.00
4417 4850 0.388520 TCGTCGCATTCACACTCCTG 60.389 55.000 0.00 0.00 0.00 3.86
4418 4851 0.388649 GTCGTCGCATTCACACTCCT 60.389 55.000 0.00 0.00 0.00 3.69
4419 4852 1.674611 CGTCGTCGCATTCACACTCC 61.675 60.000 0.00 0.00 0.00 3.85
4420 4853 1.674611 CCGTCGTCGCATTCACACTC 61.675 60.000 0.00 0.00 35.54 3.51
4421 4854 1.733041 CCGTCGTCGCATTCACACT 60.733 57.895 0.00 0.00 35.54 3.55
4422 4855 1.674611 CTCCGTCGTCGCATTCACAC 61.675 60.000 0.00 0.00 35.54 3.82
4423 4856 1.443702 CTCCGTCGTCGCATTCACA 60.444 57.895 0.00 0.00 35.54 3.58
4424 4857 2.789203 GCTCCGTCGTCGCATTCAC 61.789 63.158 0.00 0.00 35.54 3.18
4425 4858 2.506217 GCTCCGTCGTCGCATTCA 60.506 61.111 0.00 0.00 35.54 2.57
4426 4859 3.255379 GGCTCCGTCGTCGCATTC 61.255 66.667 0.00 0.00 35.54 2.67
4427 4860 3.296709 AAGGCTCCGTCGTCGCATT 62.297 57.895 0.00 1.97 35.54 3.56
4428 4861 3.701604 GAAGGCTCCGTCGTCGCAT 62.702 63.158 0.00 0.00 35.54 4.73
4429 4862 4.415332 GAAGGCTCCGTCGTCGCA 62.415 66.667 0.00 0.00 35.54 5.10
4430 4863 4.415332 TGAAGGCTCCGTCGTCGC 62.415 66.667 0.00 0.00 35.54 5.19
4431 4864 2.202492 CTGAAGGCTCCGTCGTCG 60.202 66.667 0.00 0.00 0.00 5.12
4432 4865 1.874345 TTCCTGAAGGCTCCGTCGTC 61.874 60.000 0.00 0.00 34.44 4.20
4433 4866 1.878656 CTTCCTGAAGGCTCCGTCGT 61.879 60.000 0.00 0.00 34.87 4.34
4434 4867 1.153745 CTTCCTGAAGGCTCCGTCG 60.154 63.158 0.00 0.00 34.87 5.12
4435 4868 4.921834 CTTCCTGAAGGCTCCGTC 57.078 61.111 0.00 0.00 34.87 4.79
4443 4876 2.422479 TGACGTCGTATCCTTCCTGAAG 59.578 50.000 11.62 0.00 38.14 3.02
4444 4877 2.439409 TGACGTCGTATCCTTCCTGAA 58.561 47.619 11.62 0.00 0.00 3.02
4445 4878 2.118313 TGACGTCGTATCCTTCCTGA 57.882 50.000 11.62 0.00 0.00 3.86
4446 4879 2.527100 GTTGACGTCGTATCCTTCCTG 58.473 52.381 11.62 0.00 0.00 3.86
4447 4880 1.131883 CGTTGACGTCGTATCCTTCCT 59.868 52.381 11.62 0.00 34.11 3.36
4448 4881 1.542544 CGTTGACGTCGTATCCTTCC 58.457 55.000 11.62 0.00 34.11 3.46
4449 4882 1.542544 CCGTTGACGTCGTATCCTTC 58.457 55.000 11.62 0.00 37.74 3.46
4450 4883 0.457337 GCCGTTGACGTCGTATCCTT 60.457 55.000 11.62 0.00 37.74 3.36
4451 4884 1.138247 GCCGTTGACGTCGTATCCT 59.862 57.895 11.62 0.00 37.74 3.24
4452 4885 1.875364 GGCCGTTGACGTCGTATCC 60.875 63.158 11.62 4.58 37.74 2.59
4453 4886 2.219562 CGGCCGTTGACGTCGTATC 61.220 63.158 19.50 0.28 37.74 2.24
4454 4887 2.202518 CGGCCGTTGACGTCGTAT 60.203 61.111 19.50 0.00 37.74 3.06
4475 4908 1.922135 CTTTGATTGGCCGACGGTGG 61.922 60.000 16.73 0.00 0.00 4.61
4476 4909 1.501741 CTTTGATTGGCCGACGGTG 59.498 57.895 16.73 0.00 0.00 4.94
4477 4910 1.674322 CCTTTGATTGGCCGACGGT 60.674 57.895 16.73 0.00 0.00 4.83
4478 4911 1.376683 TCCTTTGATTGGCCGACGG 60.377 57.895 10.29 10.29 0.00 4.79
4479 4912 1.644786 GGTCCTTTGATTGGCCGACG 61.645 60.000 0.00 0.00 0.00 5.12
4480 4913 1.644786 CGGTCCTTTGATTGGCCGAC 61.645 60.000 0.00 0.00 42.51 4.79
4481 4914 1.376683 CGGTCCTTTGATTGGCCGA 60.377 57.895 0.00 0.00 42.51 5.54
4482 4915 2.406616 CCGGTCCTTTGATTGGCCG 61.407 63.158 0.00 0.00 40.93 6.13
4483 4916 1.001393 TCCGGTCCTTTGATTGGCC 60.001 57.895 0.00 0.00 0.00 5.36
4484 4917 0.608035 TGTCCGGTCCTTTGATTGGC 60.608 55.000 0.00 0.00 0.00 4.52
4485 4918 1.812571 CTTGTCCGGTCCTTTGATTGG 59.187 52.381 0.00 0.00 0.00 3.16
4486 4919 2.226437 CACTTGTCCGGTCCTTTGATTG 59.774 50.000 0.00 0.00 0.00 2.67
4487 4920 2.105821 TCACTTGTCCGGTCCTTTGATT 59.894 45.455 0.00 0.00 0.00 2.57
4488 4921 1.697432 TCACTTGTCCGGTCCTTTGAT 59.303 47.619 0.00 0.00 0.00 2.57
4489 4922 1.124780 TCACTTGTCCGGTCCTTTGA 58.875 50.000 0.00 0.00 0.00 2.69
4490 4923 1.806542 CATCACTTGTCCGGTCCTTTG 59.193 52.381 0.00 0.00 0.00 2.77
4491 4924 1.420138 ACATCACTTGTCCGGTCCTTT 59.580 47.619 0.00 0.00 30.89 3.11
4492 4925 1.056660 ACATCACTTGTCCGGTCCTT 58.943 50.000 0.00 0.00 30.89 3.36
4493 4926 0.321671 CACATCACTTGTCCGGTCCT 59.678 55.000 0.00 0.00 36.00 3.85
4494 4927 1.298859 GCACATCACTTGTCCGGTCC 61.299 60.000 0.00 0.00 36.00 4.46
4495 4928 1.298859 GGCACATCACTTGTCCGGTC 61.299 60.000 0.00 0.00 36.00 4.79
4496 4929 1.302511 GGCACATCACTTGTCCGGT 60.303 57.895 0.00 0.00 36.00 5.28
4497 4930 2.040544 GGGCACATCACTTGTCCGG 61.041 63.158 0.00 0.00 36.00 5.14
4498 4931 1.003355 AGGGCACATCACTTGTCCG 60.003 57.895 0.00 0.00 36.00 4.79
4499 4932 0.962356 CCAGGGCACATCACTTGTCC 60.962 60.000 0.00 0.00 36.00 4.02
4500 4933 1.589716 GCCAGGGCACATCACTTGTC 61.590 60.000 5.20 0.00 41.49 3.18
4501 4934 1.604593 GCCAGGGCACATCACTTGT 60.605 57.895 5.20 0.00 41.49 3.16
4502 4935 2.693762 CGCCAGGGCACATCACTTG 61.694 63.158 11.42 0.00 42.06 3.16
4503 4936 2.360350 CGCCAGGGCACATCACTT 60.360 61.111 11.42 0.00 42.06 3.16
4506 4939 4.783621 GAGCGCCAGGGCACATCA 62.784 66.667 11.42 0.00 42.06 3.07
4507 4940 4.783621 TGAGCGCCAGGGCACATC 62.784 66.667 11.42 5.39 42.06 3.06
4515 4948 4.767255 GAGGGGTGTGAGCGCCAG 62.767 72.222 2.29 0.00 46.76 4.85
4517 4950 4.767255 CAGAGGGGTGTGAGCGCC 62.767 72.222 2.29 0.00 44.31 6.53
4518 4951 3.941657 GACAGAGGGGTGTGAGCGC 62.942 68.421 0.00 0.00 0.00 5.92
4519 4952 2.262915 GACAGAGGGGTGTGAGCG 59.737 66.667 0.00 0.00 0.00 5.03
4520 4953 2.262915 CGACAGAGGGGTGTGAGC 59.737 66.667 0.00 0.00 0.00 4.26
4521 4954 2.262915 GCGACAGAGGGGTGTGAG 59.737 66.667 0.00 0.00 0.00 3.51
4522 4955 2.523168 TGCGACAGAGGGGTGTGA 60.523 61.111 0.00 0.00 0.00 3.58
4523 4956 2.357517 GTGCGACAGAGGGGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
4524 4957 3.626924 GGTGCGACAGAGGGGTGT 61.627 66.667 0.00 0.00 0.00 4.16
4525 4958 4.394712 GGGTGCGACAGAGGGGTG 62.395 72.222 0.00 0.00 0.00 4.61
4526 4959 2.741878 TTAGGGTGCGACAGAGGGGT 62.742 60.000 0.00 0.00 0.00 4.95
4527 4960 1.987855 TTAGGGTGCGACAGAGGGG 60.988 63.158 0.00 0.00 0.00 4.79
4528 4961 1.218316 GTTAGGGTGCGACAGAGGG 59.782 63.158 0.00 0.00 0.00 4.30
4529 4962 0.173708 GAGTTAGGGTGCGACAGAGG 59.826 60.000 0.00 0.00 0.00 3.69
4530 4963 0.173708 GGAGTTAGGGTGCGACAGAG 59.826 60.000 0.00 0.00 0.00 3.35
4531 4964 1.592400 CGGAGTTAGGGTGCGACAGA 61.592 60.000 0.00 0.00 0.00 3.41
4532 4965 1.153823 CGGAGTTAGGGTGCGACAG 60.154 63.158 0.00 0.00 0.00 3.51
4533 4966 1.904865 ACGGAGTTAGGGTGCGACA 60.905 57.895 0.00 0.00 37.78 4.35
4534 4967 2.968206 ACGGAGTTAGGGTGCGAC 59.032 61.111 0.00 0.00 37.78 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.