Multiple sequence alignment - TraesCS3D01G254800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G254800 chr3D 100.000 5003 0 0 1 5003 356593395 356588393 0.000000e+00 9239.0
1 TraesCS3D01G254800 chr3D 100.000 299 0 0 5309 5607 356588087 356587789 2.280000e-153 553.0
2 TraesCS3D01G254800 chr3D 90.476 84 5 1 3614 3694 523157383 523157466 2.140000e-19 108.0
3 TraesCS3D01G254800 chr3D 89.286 84 9 0 188 271 57504493 57504576 7.680000e-19 106.0
4 TraesCS3D01G254800 chr3B 94.033 2715 89 22 409 3066 457577035 457574337 0.000000e+00 4048.0
5 TraesCS3D01G254800 chr3B 91.623 1146 59 15 3862 4999 457572838 457571722 0.000000e+00 1550.0
6 TraesCS3D01G254800 chr3B 90.585 393 33 3 3065 3456 457573931 457573542 8.330000e-143 518.0
7 TraesCS3D01G254800 chr3B 89.294 411 44 0 11 421 457631558 457631148 2.990000e-142 516.0
8 TraesCS3D01G254800 chr3A 94.172 2385 95 20 724 3066 475283796 475281414 0.000000e+00 3594.0
9 TraesCS3D01G254800 chr3A 92.494 1159 58 13 3857 4999 475279411 475278266 0.000000e+00 1631.0
10 TraesCS3D01G254800 chr3A 90.625 672 44 7 11 670 475284459 475283795 0.000000e+00 874.0
11 TraesCS3D01G254800 chr3A 90.674 579 49 3 3065 3642 475281008 475280434 0.000000e+00 765.0
12 TraesCS3D01G254800 chr3A 86.813 91 10 2 189 278 10305779 10305868 3.570000e-17 100.0
13 TraesCS3D01G254800 chr6D 95.349 301 11 2 5309 5607 133201030 133201329 5.080000e-130 475.0
14 TraesCS3D01G254800 chr6D 94.352 301 15 1 5309 5607 401204303 401204003 1.420000e-125 460.0
15 TraesCS3D01G254800 chr2D 95.017 301 13 1 5309 5607 380478728 380478428 6.580000e-129 472.0
16 TraesCS3D01G254800 chr2D 94.371 302 14 2 5309 5607 155341694 155341995 1.420000e-125 460.0
17 TraesCS3D01G254800 chr2D 89.610 77 5 2 3620 3693 75504896 75504972 1.660000e-15 95.3
18 TraesCS3D01G254800 chr4D 94.352 301 15 1 5309 5607 475219250 475218950 1.420000e-125 460.0
19 TraesCS3D01G254800 chr4D 94.333 300 15 1 5310 5607 226519340 226519639 5.120000e-125 459.0
20 TraesCS3D01G254800 chr4B 94.352 301 15 1 5309 5607 471346779 471346479 1.420000e-125 460.0
21 TraesCS3D01G254800 chr4B 87.500 80 7 1 3617 3693 604049698 604049619 7.740000e-14 89.8
22 TraesCS3D01G254800 chr1D 94.371 302 14 2 5309 5607 221780279 221780580 1.420000e-125 460.0
23 TraesCS3D01G254800 chr4A 94.333 300 15 1 5310 5607 175014437 175014736 5.120000e-125 459.0
24 TraesCS3D01G254800 chr4A 90.361 83 4 3 3617 3695 464695825 464695907 7.680000e-19 106.0
25 TraesCS3D01G254800 chr4A 84.884 86 10 2 3617 3699 471931248 471931333 3.600000e-12 84.2
26 TraesCS3D01G254800 chr7A 86.260 131 16 2 1797 1926 712494357 712494228 2.110000e-29 141.0
27 TraesCS3D01G254800 chr5D 88.889 99 11 0 163 261 367671685 367671587 7.630000e-24 122.0
28 TraesCS3D01G254800 chr5D 84.158 101 14 2 163 263 114626440 114626538 4.620000e-16 97.1
29 TraesCS3D01G254800 chr5D 86.813 91 7 3 3617 3703 554364692 554364603 4.620000e-16 97.1
30 TraesCS3D01G254800 chr5D 86.585 82 5 2 3617 3692 410399114 410399195 1.000000e-12 86.1
31 TraesCS3D01G254800 chr5D 83.721 86 11 3 3620 3705 450670126 450670044 1.670000e-10 78.7
32 TraesCS3D01G254800 chr1A 88.235 102 12 0 170 271 352174092 352174193 7.630000e-24 122.0
33 TraesCS3D01G254800 chr7B 90.698 86 8 0 1841 1926 713595252 713595167 1.280000e-21 115.0
34 TraesCS3D01G254800 chr7B 87.356 87 11 0 188 274 306624722 306624636 3.570000e-17 100.0
35 TraesCS3D01G254800 chr1B 88.043 92 11 0 170 261 229274838 229274747 5.940000e-20 110.0
36 TraesCS3D01G254800 chr5B 84.884 86 10 1 3613 3695 567154173 567154088 3.600000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G254800 chr3D 356587789 356593395 5606 True 4896.000000 9239 100.000000 1 5607 2 chr3D.!!$R1 5606
1 TraesCS3D01G254800 chr3B 457571722 457577035 5313 True 2038.666667 4048 92.080333 409 4999 3 chr3B.!!$R2 4590
2 TraesCS3D01G254800 chr3A 475278266 475284459 6193 True 1716.000000 3594 91.991250 11 4999 4 chr3A.!!$R1 4988

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
541 543 0.109504 TAGTGAAAAATTGCCGCCGC 60.110 50.000 0.00 0.0 0.00 6.53 F
1171 1224 4.101741 ACGCCTAGAGCATTTTTCCTCTAT 59.898 41.667 0.00 0.0 44.04 1.98 F
1744 1828 1.904865 ACTTACCTCGGACACGCCA 60.905 57.895 0.00 0.0 40.69 5.69 F
3146 3643 0.255890 TTCACTTGGATGCTAGGGGC 59.744 55.000 0.00 0.0 42.22 5.80 F
3217 3715 0.174389 TCATCCTCGAGCTGAAGTGC 59.826 55.000 6.99 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1523 1607 1.209504 GCCCAAGTACTGCATCCTACA 59.790 52.381 0.00 0.0 0.00 2.74 R
2954 3040 0.813184 ATTCTGCAAATGGCTCCACG 59.187 50.000 0.00 0.0 45.15 4.94 R
3189 3686 0.177604 CTCGAGGATGAGCTGCCTTT 59.822 55.000 3.91 0.0 33.84 3.11 R
4387 5708 0.977395 GGTGAAGCCTGTAGACCTGT 59.023 55.000 0.00 0.0 0.00 4.00 R
4628 5957 2.297597 AGGCGGCTATACTCATTGACTC 59.702 50.000 11.03 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 137 5.384336 TGCTAGCAAAATTATGGGCATCTA 58.616 37.500 16.84 0.00 0.00 1.98
167 168 6.417191 TCATCTACCGTCATGCTTAAAAAC 57.583 37.500 0.00 0.00 0.00 2.43
175 176 8.416485 ACCGTCATGCTTAAAAACTATACTAC 57.584 34.615 0.00 0.00 0.00 2.73
181 182 7.529880 TGCTTAAAAACTATACTACCTTCGC 57.470 36.000 0.00 0.00 0.00 4.70
182 183 6.536224 TGCTTAAAAACTATACTACCTTCGCC 59.464 38.462 0.00 0.00 0.00 5.54
183 184 6.018425 GCTTAAAAACTATACTACCTTCGCCC 60.018 42.308 0.00 0.00 0.00 6.13
228 229 7.709269 TGGATGTATCTAAACGTATTTCAGC 57.291 36.000 0.00 0.00 0.00 4.26
241 242 7.766219 ACGTATTTCAGCGTTAAATACATCT 57.234 32.000 21.11 8.60 44.51 2.90
242 243 7.618442 ACGTATTTCAGCGTTAAATACATCTG 58.382 34.615 21.11 12.76 44.51 2.90
255 256 5.940192 AATACATCTGTTTGAGCGACAAA 57.060 34.783 7.75 7.75 44.79 2.83
271 272 4.328983 GCGACAAATAATTTCAGACGGAGA 59.671 41.667 0.00 0.00 0.00 3.71
293 294 5.305644 AGAGAATACCGTCCATAGCATTCTT 59.694 40.000 0.00 0.00 33.93 2.52
299 300 3.993081 CCGTCCATAGCATTCTTCATCTC 59.007 47.826 0.00 0.00 0.00 2.75
305 306 9.585099 GTCCATAGCATTCTTCATCTCTATAAG 57.415 37.037 0.00 0.00 0.00 1.73
338 339 3.757270 TCATCACAATTACCCCAAACGT 58.243 40.909 0.00 0.00 0.00 3.99
341 342 1.542472 CACAATTACCCCAAACGTCCC 59.458 52.381 0.00 0.00 0.00 4.46
373 374 7.499232 GGATGCTACAAATAACACCAGAATAGT 59.501 37.037 0.00 0.00 0.00 2.12
374 375 7.843490 TGCTACAAATAACACCAGAATAGTC 57.157 36.000 0.00 0.00 0.00 2.59
406 407 3.133721 AGACTGCGAGCTTAATCCTTGAT 59.866 43.478 0.00 0.00 0.00 2.57
414 415 3.118629 AGCTTAATCCTTGATCGTGAGCA 60.119 43.478 0.00 0.00 0.00 4.26
454 455 6.861572 CCTATATGCAATTGCTTCAACAGATG 59.138 38.462 29.37 10.11 42.66 2.90
474 475 0.749649 AGCGATCCATCACTCTGTCC 59.250 55.000 0.00 0.00 0.00 4.02
476 477 1.069823 GCGATCCATCACTCTGTCCAT 59.930 52.381 0.00 0.00 0.00 3.41
477 478 2.297315 GCGATCCATCACTCTGTCCATA 59.703 50.000 0.00 0.00 0.00 2.74
478 479 3.243873 GCGATCCATCACTCTGTCCATAA 60.244 47.826 0.00 0.00 0.00 1.90
479 480 4.554292 CGATCCATCACTCTGTCCATAAG 58.446 47.826 0.00 0.00 0.00 1.73
480 481 4.279420 CGATCCATCACTCTGTCCATAAGA 59.721 45.833 0.00 0.00 0.00 2.10
503 504 0.838987 TAACCAGAACGAAGGCCCCT 60.839 55.000 0.00 0.00 0.00 4.79
541 543 0.109504 TAGTGAAAAATTGCCGCCGC 60.110 50.000 0.00 0.00 0.00 6.53
646 664 4.937696 ATTGATCGTCAATAACAACGCA 57.062 36.364 10.29 0.00 44.57 5.24
796 821 4.260579 CGTCCGCATATGCATGTTCTTTAA 60.261 41.667 26.52 0.00 42.21 1.52
1144 1197 4.779733 TCCCCTCCTCCTCGTGCC 62.780 72.222 0.00 0.00 0.00 5.01
1171 1224 4.101741 ACGCCTAGAGCATTTTTCCTCTAT 59.898 41.667 0.00 0.00 44.04 1.98
1186 1239 6.781857 TTCCTCTATCTGTATGACCTCCTA 57.218 41.667 0.00 0.00 0.00 2.94
1239 1292 9.636789 AGTTTTAATTAGTTACTGGTGGAAGTT 57.363 29.630 0.00 0.00 0.00 2.66
1450 1515 5.174398 GGATGCTATGAACATGAAAATTGCG 59.826 40.000 0.00 0.00 0.00 4.85
1523 1607 4.415596 TGCAGTTCAAAGGGTAAATGGAT 58.584 39.130 0.00 0.00 0.00 3.41
1564 1648 6.014925 TGGGCACTCTAAAAGGTAATTTTTCC 60.015 38.462 0.00 0.00 41.40 3.13
1605 1689 6.425114 AGCTCTTTATTGAATACACATAGCCG 59.575 38.462 0.00 0.00 0.00 5.52
1625 1709 4.554330 GCCGTTTACGTTGATTTTACCACA 60.554 41.667 0.00 0.00 37.74 4.17
1655 1739 3.254892 GAACAAGTTCTAAGGAGCTCCG 58.745 50.000 26.95 13.37 37.58 4.63
1744 1828 1.904865 ACTTACCTCGGACACGCCA 60.905 57.895 0.00 0.00 40.69 5.69
2310 2394 3.416277 CTTAAATGAACACCGATGCACG 58.584 45.455 0.00 0.00 42.18 5.34
2360 2444 7.396339 ACACATCTACTCCAAAGACACTACATA 59.604 37.037 0.00 0.00 0.00 2.29
2375 2459 8.938883 AGACACTACATATACCATTCCTCATTT 58.061 33.333 0.00 0.00 0.00 2.32
2411 2495 5.240891 GCCATAGCTGCATTACTGATAGAA 58.759 41.667 1.02 0.00 35.50 2.10
2560 2644 4.467795 AGCTACATCTGGTCAAAAGCTAGA 59.532 41.667 0.00 0.00 37.08 2.43
2795 2879 6.938698 TGTGGTTCTTACTTTATCCTGGTA 57.061 37.500 0.00 0.00 0.00 3.25
2798 2882 7.827236 TGTGGTTCTTACTTTATCCTGGTATTG 59.173 37.037 0.00 0.00 0.00 1.90
2822 2906 4.569719 TGGATCCTGAAGTTACCCTTTC 57.430 45.455 14.23 0.00 32.03 2.62
2824 2908 3.197116 GGATCCTGAAGTTACCCTTTCGA 59.803 47.826 3.84 0.00 32.03 3.71
2851 2935 3.744940 ATCAAGTGTGATTGGGTGGAT 57.255 42.857 0.00 0.00 42.03 3.41
2861 2945 5.301551 TGTGATTGGGTGGATATGTTTATGC 59.698 40.000 0.00 0.00 0.00 3.14
2892 2976 2.736144 TGGTAGTCATTCGTGGTGAC 57.264 50.000 8.74 8.74 44.85 3.67
2895 2979 2.607187 GTAGTCATTCGTGGTGACCTG 58.393 52.381 2.11 0.00 45.47 4.00
2924 3010 6.126863 TCAGAGTTTGGTTTATCAGTCCAT 57.873 37.500 0.00 0.00 0.00 3.41
2927 3013 8.160765 TCAGAGTTTGGTTTATCAGTCCATTTA 58.839 33.333 0.00 0.00 0.00 1.40
2974 3060 2.016318 CGTGGAGCCATTTGCAGAATA 58.984 47.619 0.00 0.00 44.83 1.75
2980 3066 5.532406 TGGAGCCATTTGCAGAATATAAGTC 59.468 40.000 0.00 0.00 44.83 3.01
2981 3067 5.532406 GGAGCCATTTGCAGAATATAAGTCA 59.468 40.000 0.00 0.00 44.83 3.41
2992 3081 8.872845 TGCAGAATATAAGTCATTATACATGCG 58.127 33.333 0.00 0.00 39.66 4.73
2993 3082 8.331022 GCAGAATATAAGTCATTATACATGCGG 58.669 37.037 0.00 0.00 36.83 5.69
3016 3105 3.072038 GGTAGGCCCATTTATAGGTCGTT 59.928 47.826 0.00 0.00 31.17 3.85
3018 3107 2.158667 AGGCCCATTTATAGGTCGTTGG 60.159 50.000 0.00 0.00 31.17 3.77
3100 3597 6.226787 CCTGCTTTCCTATCAATACGATTCT 58.773 40.000 0.00 0.00 35.39 2.40
3105 3602 9.646427 GCTTTCCTATCAATACGATTCTTATCT 57.354 33.333 0.00 0.00 35.39 1.98
3116 3613 5.730550 ACGATTCTTATCTGCTTGTGGTTA 58.269 37.500 0.00 0.00 0.00 2.85
3118 3615 6.042777 CGATTCTTATCTGCTTGTGGTTAGA 58.957 40.000 0.00 0.00 0.00 2.10
3134 3631 9.613428 TTGTGGTTAGATATCCTTATTCACTTG 57.387 33.333 0.00 0.00 0.00 3.16
3140 3637 7.327064 AGATATCCTTATTCACTTGGATGCT 57.673 36.000 0.00 0.00 39.39 3.79
3141 3638 8.441311 AGATATCCTTATTCACTTGGATGCTA 57.559 34.615 0.00 0.00 39.39 3.49
3143 3640 5.296151 TCCTTATTCACTTGGATGCTAGG 57.704 43.478 0.32 0.00 0.00 3.02
3144 3641 4.103153 TCCTTATTCACTTGGATGCTAGGG 59.897 45.833 0.32 0.00 0.00 3.53
3145 3642 4.392940 CTTATTCACTTGGATGCTAGGGG 58.607 47.826 0.00 0.00 0.00 4.79
3146 3643 0.255890 TTCACTTGGATGCTAGGGGC 59.744 55.000 0.00 0.00 42.22 5.80
3189 3686 3.181462 GCACATATCATCACTGGTCCTCA 60.181 47.826 0.00 0.00 0.00 3.86
3217 3715 0.174389 TCATCCTCGAGCTGAAGTGC 59.826 55.000 6.99 0.00 0.00 4.40
3253 3751 2.291282 CCCTTTGTAGCCCCATGTTGTA 60.291 50.000 0.00 0.00 0.00 2.41
3263 3761 3.873801 GCCCCATGTTGTAGAGATGTTGT 60.874 47.826 0.00 0.00 0.00 3.32
3273 3771 4.756642 TGTAGAGATGTTGTGAAAGCTTGG 59.243 41.667 0.00 0.00 0.00 3.61
3280 3778 3.186909 GTTGTGAAAGCTTGGACAAACC 58.813 45.455 19.80 9.27 39.54 3.27
3308 3806 7.375053 AGAAATGAAGCTCCGATACTAGATTC 58.625 38.462 0.00 0.00 38.34 2.52
3368 3866 4.708726 AACAATCTGGCTTATTGACTGC 57.291 40.909 15.98 0.00 37.68 4.40
3389 3887 7.649057 ACTGCTTTTCTTTAACTGATAACCAC 58.351 34.615 0.00 0.00 0.00 4.16
3403 3901 2.307496 AACCACATGGAAGGCATGAA 57.693 45.000 4.53 0.00 38.94 2.57
3404 3902 2.307496 ACCACATGGAAGGCATGAAA 57.693 45.000 4.53 0.00 38.94 2.69
3405 3903 2.607499 ACCACATGGAAGGCATGAAAA 58.393 42.857 4.53 0.00 38.94 2.29
3408 3906 4.403432 ACCACATGGAAGGCATGAAAATAG 59.597 41.667 4.53 0.00 38.94 1.73
3437 3935 8.472007 TTGTTAATCACAAAAGGTACAAGGAT 57.528 30.769 0.00 0.00 42.76 3.24
3453 3951 7.601508 GGTACAAGGATGGTATATACGAAAAGG 59.398 40.741 6.79 0.00 0.00 3.11
3456 3954 6.022163 AGGATGGTATATACGAAAAGGACG 57.978 41.667 6.79 0.00 0.00 4.79
3467 3965 5.063180 ACGAAAAGGACGTGTGATATACA 57.937 39.130 0.00 0.00 42.37 2.29
3494 3992 4.494591 AGAGGGGGAAACAGGAGATATAC 58.505 47.826 0.00 0.00 0.00 1.47
3526 4024 8.190784 ACTGTATAAGGTTTATTGATTGCTTGC 58.809 33.333 0.00 0.00 0.00 4.01
3548 4046 4.023707 GCTTACAATGGACATGATGGTAGC 60.024 45.833 0.00 0.99 0.00 3.58
3549 4047 2.936202 ACAATGGACATGATGGTAGCC 58.064 47.619 0.00 0.00 0.00 3.93
3550 4048 2.233271 CAATGGACATGATGGTAGCCC 58.767 52.381 0.00 0.00 0.00 5.19
3556 4054 1.922447 ACATGATGGTAGCCCCTTTCA 59.078 47.619 0.00 0.00 32.78 2.69
3563 4061 5.551583 TGATGGTAGCCCCTTTCATATATGT 59.448 40.000 12.42 0.00 0.00 2.29
3566 4064 3.814504 AGCCCCTTTCATATATGTGGG 57.185 47.619 22.59 22.59 35.42 4.61
3628 4126 9.990868 AAATCCCTAACAAATATTACCTCTGTT 57.009 29.630 7.43 7.43 34.71 3.16
3631 4129 7.404980 TCCCTAACAAATATTACCTCTGTTCCT 59.595 37.037 5.87 0.00 32.69 3.36
3632 4130 8.711170 CCCTAACAAATATTACCTCTGTTCCTA 58.289 37.037 5.87 0.00 32.69 2.94
3644 4142 7.657023 ACCTCTGTTCCTAAATATAAGACGT 57.343 36.000 0.00 0.00 0.00 4.34
3645 4143 8.075761 ACCTCTGTTCCTAAATATAAGACGTT 57.924 34.615 0.00 0.00 0.00 3.99
3646 4144 8.537858 ACCTCTGTTCCTAAATATAAGACGTTT 58.462 33.333 0.00 0.00 0.00 3.60
3647 4145 9.379791 CCTCTGTTCCTAAATATAAGACGTTTT 57.620 33.333 0.00 0.00 0.00 2.43
3685 4849 6.811253 AACTGCAACGTCTTATATTTTGGA 57.189 33.333 0.00 0.00 0.00 3.53
3695 4859 6.821665 CGTCTTATATTTTGGAACAGAGGGAA 59.178 38.462 0.00 0.00 42.39 3.97
3708 4876 6.207614 GGAACAGAGGGAATAGCAATTAATCC 59.792 42.308 0.00 0.00 31.50 3.01
3742 4910 8.881262 CCTAACAGTAAGGTCCTTATCCATATT 58.119 37.037 14.54 6.67 0.00 1.28
3821 4989 5.186198 ACAAAGAGTAGCAACTGAGTTTGT 58.814 37.500 0.00 0.00 36.66 2.83
3822 4990 5.648092 ACAAAGAGTAGCAACTGAGTTTGTT 59.352 36.000 0.00 0.00 37.40 2.83
3823 4991 5.741388 AAGAGTAGCAACTGAGTTTGTTG 57.259 39.130 0.00 0.00 45.23 3.33
3830 4998 3.893720 CAACTGAGTTTGTTGCTCATCC 58.106 45.455 0.00 0.00 41.49 3.51
3831 4999 3.213206 ACTGAGTTTGTTGCTCATCCA 57.787 42.857 0.00 0.00 41.49 3.41
3832 5000 2.880890 ACTGAGTTTGTTGCTCATCCAC 59.119 45.455 0.00 0.00 41.49 4.02
3833 5001 2.880268 CTGAGTTTGTTGCTCATCCACA 59.120 45.455 0.00 0.00 41.49 4.17
3834 5002 3.286353 TGAGTTTGTTGCTCATCCACAA 58.714 40.909 0.00 0.00 37.98 3.33
3835 5003 3.066621 TGAGTTTGTTGCTCATCCACAAC 59.933 43.478 0.00 0.00 45.06 3.32
3841 5009 4.764679 GTTGCTCATCCACAACACATAA 57.235 40.909 0.00 0.00 44.39 1.90
3842 5010 4.726416 GTTGCTCATCCACAACACATAAG 58.274 43.478 0.00 0.00 44.39 1.73
3843 5011 3.346315 TGCTCATCCACAACACATAAGG 58.654 45.455 0.00 0.00 0.00 2.69
3844 5012 2.098117 GCTCATCCACAACACATAAGGC 59.902 50.000 0.00 0.00 0.00 4.35
3845 5013 3.614092 CTCATCCACAACACATAAGGCT 58.386 45.455 0.00 0.00 0.00 4.58
3846 5014 4.012374 CTCATCCACAACACATAAGGCTT 58.988 43.478 4.58 4.58 0.00 4.35
3847 5015 3.758023 TCATCCACAACACATAAGGCTTG 59.242 43.478 10.69 0.00 0.00 4.01
3848 5016 3.222173 TCCACAACACATAAGGCTTGT 57.778 42.857 10.69 0.00 0.00 3.16
3849 5017 3.146066 TCCACAACACATAAGGCTTGTC 58.854 45.455 10.69 0.00 0.00 3.18
3850 5018 3.149196 CCACAACACATAAGGCTTGTCT 58.851 45.455 10.69 0.00 0.00 3.41
3851 5019 3.058016 CCACAACACATAAGGCTTGTCTG 60.058 47.826 10.69 3.65 0.00 3.51
3852 5020 2.554032 ACAACACATAAGGCTTGTCTGC 59.446 45.455 10.69 0.00 0.00 4.26
3853 5021 2.816087 CAACACATAAGGCTTGTCTGCT 59.184 45.455 10.69 0.00 0.00 4.24
3854 5022 2.704572 ACACATAAGGCTTGTCTGCTC 58.295 47.619 10.69 0.00 0.00 4.26
3855 5023 2.304180 ACACATAAGGCTTGTCTGCTCT 59.696 45.455 10.69 0.00 0.00 4.09
3901 5209 8.461222 TGATAACTTTGTATCAATGAGGCAAAG 58.539 33.333 26.00 26.00 46.50 2.77
3918 5226 7.615365 TGAGGCAAAGTAATGTCCTGATATTTT 59.385 33.333 0.00 0.00 30.36 1.82
3996 5304 3.826157 CTGGTTGAGGATTTTAGGCACAA 59.174 43.478 0.00 0.00 0.00 3.33
4067 5376 2.047769 TACAGGGCCCAGTTTCCTTA 57.952 50.000 26.59 2.65 0.00 2.69
4079 5388 6.051717 CCCAGTTTCCTTATAGTGATCACTG 58.948 44.000 33.76 19.06 42.52 3.66
4081 5390 6.352222 CCAGTTTCCTTATAGTGATCACTGGT 60.352 42.308 33.76 24.41 42.55 4.00
4084 5393 6.867519 TTCCTTATAGTGATCACTGGTCAA 57.132 37.500 33.76 20.64 42.52 3.18
4085 5394 7.437713 TTCCTTATAGTGATCACTGGTCAAT 57.562 36.000 33.76 22.19 42.52 2.57
4086 5395 8.547481 TTCCTTATAGTGATCACTGGTCAATA 57.453 34.615 33.76 21.24 42.52 1.90
4087 5396 8.727100 TCCTTATAGTGATCACTGGTCAATAT 57.273 34.615 33.76 20.90 42.52 1.28
4094 5403 8.668510 AGTGATCACTGGTCAATATTCAATAC 57.331 34.615 27.37 0.00 40.75 1.89
4116 5426 2.637872 TGGTTCTAGGCTGTTAGCAACT 59.362 45.455 0.00 0.00 44.75 3.16
4137 5447 6.620877 ACTTGTTCCCTCATGTGATAACTA 57.379 37.500 0.00 0.00 0.00 2.24
4140 5450 7.770897 ACTTGTTCCCTCATGTGATAACTATTC 59.229 37.037 0.00 0.00 0.00 1.75
4162 5472 7.881643 TTCGTTTCATTTCATTGGTAAATGG 57.118 32.000 9.62 0.00 42.97 3.16
4163 5473 6.987386 TCGTTTCATTTCATTGGTAAATGGT 58.013 32.000 9.62 0.00 42.97 3.55
4164 5474 8.112016 TCGTTTCATTTCATTGGTAAATGGTA 57.888 30.769 9.62 0.00 42.97 3.25
4165 5475 8.577296 TCGTTTCATTTCATTGGTAAATGGTAA 58.423 29.630 9.62 4.37 42.97 2.85
4166 5476 9.197694 CGTTTCATTTCATTGGTAAATGGTAAA 57.802 29.630 9.62 3.78 42.97 2.01
4187 5497 9.198475 GGTAAATATAGTATAGCTTAGGCCTGA 57.802 37.037 17.99 6.19 39.73 3.86
4213 5534 6.184068 TGCTGTTATTAAAGGATTGCCTACA 58.816 36.000 0.00 0.00 46.28 2.74
4214 5535 6.318648 TGCTGTTATTAAAGGATTGCCTACAG 59.681 38.462 0.00 0.00 46.28 2.74
4215 5536 6.318900 GCTGTTATTAAAGGATTGCCTACAGT 59.681 38.462 10.33 0.00 46.28 3.55
4236 5557 7.848128 ACAGTTTACACCATACACTATAGCTT 58.152 34.615 0.00 0.00 0.00 3.74
4264 5585 6.188407 ACTTTCCTGACTATGACTACTGCTA 58.812 40.000 0.00 0.00 0.00 3.49
4270 5591 6.039829 CCTGACTATGACTACTGCTATTGTGA 59.960 42.308 0.00 0.00 0.00 3.58
4274 5595 8.465273 ACTATGACTACTGCTATTGTGACATA 57.535 34.615 0.00 0.00 0.00 2.29
4291 5612 8.185003 TGTGACATATACTTTTCTCATGTTCG 57.815 34.615 0.00 0.00 30.25 3.95
4297 5618 8.664798 CATATACTTTTCTCATGTTCGTTCCAA 58.335 33.333 0.00 0.00 0.00 3.53
4378 5699 4.166725 TCTTAGCATGTCTCATTTCCCCAT 59.833 41.667 0.00 0.00 0.00 4.00
4379 5700 2.941480 AGCATGTCTCATTTCCCCATC 58.059 47.619 0.00 0.00 0.00 3.51
4380 5701 1.959282 GCATGTCTCATTTCCCCATCC 59.041 52.381 0.00 0.00 0.00 3.51
4381 5702 2.687614 GCATGTCTCATTTCCCCATCCA 60.688 50.000 0.00 0.00 0.00 3.41
4387 5708 4.104738 GTCTCATTTCCCCATCCATCCTTA 59.895 45.833 0.00 0.00 0.00 2.69
4623 5952 3.311871 CCTTGACTCATAGCACAGCAATC 59.688 47.826 0.00 0.00 0.00 2.67
4628 5957 3.693085 ACTCATAGCACAGCAATCAAAGG 59.307 43.478 0.00 0.00 0.00 3.11
4646 5975 4.592485 AAGGAGTCAATGAGTATAGCCG 57.408 45.455 0.00 0.00 0.00 5.52
4695 6024 4.163078 AGCCAGTTTATACATCTGCAGAGT 59.837 41.667 22.96 20.33 0.00 3.24
4759 6088 3.174375 GCAGAGAAATTGTCCGATTTGC 58.826 45.455 0.00 0.00 29.75 3.68
4762 6091 2.418628 GAGAAATTGTCCGATTTGCCGA 59.581 45.455 0.00 0.00 29.75 5.54
4804 6133 4.613925 AAACAAGAGAGCTGATCTGTCA 57.386 40.909 0.00 0.00 38.84 3.58
5358 6687 7.656412 ACATTTTCCCAATTTTAATTGTTGGC 58.344 30.769 12.70 0.00 43.24 4.52
5359 6688 7.286316 ACATTTTCCCAATTTTAATTGTTGGCA 59.714 29.630 12.70 0.00 43.24 4.92
5360 6689 6.874288 TTTCCCAATTTTAATTGTTGGCAG 57.126 33.333 12.70 0.00 43.24 4.85
5361 6690 5.815233 TCCCAATTTTAATTGTTGGCAGA 57.185 34.783 12.70 1.16 43.24 4.26
5362 6691 6.371595 TCCCAATTTTAATTGTTGGCAGAT 57.628 33.333 12.70 0.00 43.24 2.90
5363 6692 6.777782 TCCCAATTTTAATTGTTGGCAGATT 58.222 32.000 12.70 0.00 43.24 2.40
5364 6693 7.230027 TCCCAATTTTAATTGTTGGCAGATTT 58.770 30.769 12.70 0.00 43.24 2.17
5365 6694 7.723172 TCCCAATTTTAATTGTTGGCAGATTTT 59.277 29.630 12.70 0.00 43.24 1.82
5366 6695 9.007901 CCCAATTTTAATTGTTGGCAGATTTTA 57.992 29.630 12.70 0.00 43.24 1.52
5368 6697 9.545611 CAATTTTAATTGTTGGCAGATTTTAGC 57.454 29.630 6.97 0.00 40.61 3.09
5369 6698 8.845413 ATTTTAATTGTTGGCAGATTTTAGCA 57.155 26.923 0.00 0.00 0.00 3.49
5370 6699 8.668510 TTTTAATTGTTGGCAGATTTTAGCAA 57.331 26.923 0.00 0.00 0.00 3.91
5371 6700 8.845413 TTTAATTGTTGGCAGATTTTAGCAAT 57.155 26.923 0.00 0.00 0.00 3.56
5372 6701 8.845413 TTAATTGTTGGCAGATTTTAGCAATT 57.155 26.923 0.00 0.00 37.58 2.32
5373 6702 9.935241 TTAATTGTTGGCAGATTTTAGCAATTA 57.065 25.926 0.00 0.00 36.11 1.40
5374 6703 8.483307 AATTGTTGGCAGATTTTAGCAATTAG 57.517 30.769 0.00 0.00 33.95 1.73
5375 6704 6.588719 TGTTGGCAGATTTTAGCAATTAGT 57.411 33.333 0.00 0.00 0.00 2.24
5376 6705 7.695480 TGTTGGCAGATTTTAGCAATTAGTA 57.305 32.000 0.00 0.00 0.00 1.82
5377 6706 7.535139 TGTTGGCAGATTTTAGCAATTAGTAC 58.465 34.615 0.00 0.00 0.00 2.73
5378 6707 7.175816 TGTTGGCAGATTTTAGCAATTAGTACA 59.824 33.333 0.00 0.00 0.00 2.90
5379 6708 7.695480 TGGCAGATTTTAGCAATTAGTACAA 57.305 32.000 0.00 0.00 0.00 2.41
5380 6709 7.761409 TGGCAGATTTTAGCAATTAGTACAAG 58.239 34.615 0.00 0.00 0.00 3.16
5381 6710 7.393234 TGGCAGATTTTAGCAATTAGTACAAGT 59.607 33.333 0.00 0.00 0.00 3.16
5382 6711 7.910683 GGCAGATTTTAGCAATTAGTACAAGTC 59.089 37.037 0.00 0.00 0.00 3.01
5383 6712 8.450964 GCAGATTTTAGCAATTAGTACAAGTCA 58.549 33.333 0.00 0.00 0.00 3.41
5386 6715 9.278734 GATTTTAGCAATTAGTACAAGTCAAGC 57.721 33.333 0.00 0.00 0.00 4.01
5387 6716 7.737972 TTTAGCAATTAGTACAAGTCAAGCA 57.262 32.000 0.00 0.00 0.00 3.91
5388 6717 7.737972 TTAGCAATTAGTACAAGTCAAGCAA 57.262 32.000 0.00 0.00 0.00 3.91
5389 6718 6.824305 AGCAATTAGTACAAGTCAAGCAAT 57.176 33.333 0.00 0.00 0.00 3.56
5390 6719 6.846350 AGCAATTAGTACAAGTCAAGCAATC 58.154 36.000 0.00 0.00 0.00 2.67
5391 6720 6.430925 AGCAATTAGTACAAGTCAAGCAATCA 59.569 34.615 0.00 0.00 0.00 2.57
5392 6721 7.040478 AGCAATTAGTACAAGTCAAGCAATCAA 60.040 33.333 0.00 0.00 0.00 2.57
5393 6722 7.061094 GCAATTAGTACAAGTCAAGCAATCAAC 59.939 37.037 0.00 0.00 0.00 3.18
5394 6723 7.744087 ATTAGTACAAGTCAAGCAATCAACA 57.256 32.000 0.00 0.00 0.00 3.33
5395 6724 7.744087 TTAGTACAAGTCAAGCAATCAACAT 57.256 32.000 0.00 0.00 0.00 2.71
5396 6725 8.840833 TTAGTACAAGTCAAGCAATCAACATA 57.159 30.769 0.00 0.00 0.00 2.29
5397 6726 7.133891 AGTACAAGTCAAGCAATCAACATAC 57.866 36.000 0.00 0.00 0.00 2.39
5398 6727 6.710295 AGTACAAGTCAAGCAATCAACATACA 59.290 34.615 0.00 0.00 0.00 2.29
5399 6728 5.762045 ACAAGTCAAGCAATCAACATACAC 58.238 37.500 0.00 0.00 0.00 2.90
5400 6729 5.299028 ACAAGTCAAGCAATCAACATACACA 59.701 36.000 0.00 0.00 0.00 3.72
5401 6730 6.016024 ACAAGTCAAGCAATCAACATACACAT 60.016 34.615 0.00 0.00 0.00 3.21
5402 6731 5.946298 AGTCAAGCAATCAACATACACATG 58.054 37.500 0.00 0.00 38.21 3.21
5403 6732 4.560035 GTCAAGCAATCAACATACACATGC 59.440 41.667 0.00 0.00 35.39 4.06
5404 6733 4.217983 TCAAGCAATCAACATACACATGCA 59.782 37.500 0.00 0.00 35.39 3.96
5405 6734 4.787260 AGCAATCAACATACACATGCAA 57.213 36.364 0.00 0.00 35.39 4.08
5406 6735 5.333299 AGCAATCAACATACACATGCAAT 57.667 34.783 0.00 0.00 35.39 3.56
5407 6736 5.726397 AGCAATCAACATACACATGCAATT 58.274 33.333 0.00 0.00 35.39 2.32
5408 6737 5.808540 AGCAATCAACATACACATGCAATTC 59.191 36.000 0.00 0.00 35.39 2.17
5409 6738 5.808540 GCAATCAACATACACATGCAATTCT 59.191 36.000 0.00 0.00 35.39 2.40
5410 6739 6.974048 GCAATCAACATACACATGCAATTCTA 59.026 34.615 0.00 0.00 35.39 2.10
5411 6740 7.488792 GCAATCAACATACACATGCAATTCTAA 59.511 33.333 0.00 0.00 35.39 2.10
5412 6741 9.016623 CAATCAACATACACATGCAATTCTAAG 57.983 33.333 0.00 0.00 35.39 2.18
5413 6742 7.920160 TCAACATACACATGCAATTCTAAGA 57.080 32.000 0.00 0.00 35.39 2.10
5414 6743 7.977904 TCAACATACACATGCAATTCTAAGAG 58.022 34.615 0.00 0.00 35.39 2.85
5415 6744 7.607607 TCAACATACACATGCAATTCTAAGAGT 59.392 33.333 0.00 0.00 35.39 3.24
5416 6745 8.882736 CAACATACACATGCAATTCTAAGAGTA 58.117 33.333 0.00 0.00 35.39 2.59
5417 6746 8.654230 ACATACACATGCAATTCTAAGAGTAG 57.346 34.615 0.00 0.00 35.39 2.57
5418 6747 7.225538 ACATACACATGCAATTCTAAGAGTAGC 59.774 37.037 0.00 0.00 35.39 3.58
5419 6748 5.491070 ACACATGCAATTCTAAGAGTAGCA 58.509 37.500 0.00 0.00 34.78 3.49
5420 6749 5.583854 ACACATGCAATTCTAAGAGTAGCAG 59.416 40.000 0.00 0.00 33.69 4.24
5421 6750 4.574013 ACATGCAATTCTAAGAGTAGCAGC 59.426 41.667 0.00 0.00 33.69 5.25
5422 6751 3.190079 TGCAATTCTAAGAGTAGCAGCG 58.810 45.455 0.00 0.00 0.00 5.18
5423 6752 3.119137 TGCAATTCTAAGAGTAGCAGCGA 60.119 43.478 0.00 0.00 0.00 4.93
5424 6753 3.865745 GCAATTCTAAGAGTAGCAGCGAA 59.134 43.478 0.00 0.00 0.00 4.70
5425 6754 4.330074 GCAATTCTAAGAGTAGCAGCGAAA 59.670 41.667 0.00 0.00 0.00 3.46
5426 6755 5.163854 GCAATTCTAAGAGTAGCAGCGAAAA 60.164 40.000 0.00 0.00 0.00 2.29
5427 6756 6.473521 CAATTCTAAGAGTAGCAGCGAAAAG 58.526 40.000 0.00 0.00 0.00 2.27
5428 6757 4.785511 TCTAAGAGTAGCAGCGAAAAGT 57.214 40.909 0.00 0.00 0.00 2.66
5429 6758 5.892160 TCTAAGAGTAGCAGCGAAAAGTA 57.108 39.130 0.00 0.00 0.00 2.24
5430 6759 6.263516 TCTAAGAGTAGCAGCGAAAAGTAA 57.736 37.500 0.00 0.00 0.00 2.24
5431 6760 6.684686 TCTAAGAGTAGCAGCGAAAAGTAAA 58.315 36.000 0.00 0.00 0.00 2.01
5432 6761 7.149973 TCTAAGAGTAGCAGCGAAAAGTAAAA 58.850 34.615 0.00 0.00 0.00 1.52
5433 6762 5.593183 AGAGTAGCAGCGAAAAGTAAAAC 57.407 39.130 0.00 0.00 0.00 2.43
5434 6763 5.054477 AGAGTAGCAGCGAAAAGTAAAACA 58.946 37.500 0.00 0.00 0.00 2.83
5435 6764 5.701290 AGAGTAGCAGCGAAAAGTAAAACAT 59.299 36.000 0.00 0.00 0.00 2.71
5436 6765 6.204882 AGAGTAGCAGCGAAAAGTAAAACATT 59.795 34.615 0.00 0.00 0.00 2.71
5437 6766 6.142817 AGTAGCAGCGAAAAGTAAAACATTG 58.857 36.000 0.00 0.00 0.00 2.82
5438 6767 3.735746 AGCAGCGAAAAGTAAAACATTGC 59.264 39.130 0.00 0.00 0.00 3.56
5439 6768 3.489047 GCAGCGAAAAGTAAAACATTGCA 59.511 39.130 0.00 0.00 0.00 4.08
5440 6769 4.150451 GCAGCGAAAAGTAAAACATTGCAT 59.850 37.500 0.00 0.00 0.00 3.96
5441 6770 5.344665 GCAGCGAAAAGTAAAACATTGCATA 59.655 36.000 0.00 0.00 0.00 3.14
5442 6771 6.034898 GCAGCGAAAAGTAAAACATTGCATAT 59.965 34.615 0.00 0.00 0.00 1.78
5443 6772 7.385650 CAGCGAAAAGTAAAACATTGCATATG 58.614 34.615 0.00 0.00 0.00 1.78
5444 6773 6.531240 AGCGAAAAGTAAAACATTGCATATGG 59.469 34.615 4.56 0.00 0.00 2.74
5445 6774 6.529829 GCGAAAAGTAAAACATTGCATATGGA 59.470 34.615 4.56 0.00 0.00 3.41
5446 6775 7.253750 GCGAAAAGTAAAACATTGCATATGGAG 60.254 37.037 4.56 0.00 0.00 3.86
5447 6776 7.220683 CGAAAAGTAAAACATTGCATATGGAGG 59.779 37.037 4.56 0.69 0.00 4.30
5448 6777 7.480760 AAAGTAAAACATTGCATATGGAGGT 57.519 32.000 4.56 1.34 0.00 3.85
5449 6778 8.588290 AAAGTAAAACATTGCATATGGAGGTA 57.412 30.769 4.56 0.00 0.00 3.08
5450 6779 8.588290 AAGTAAAACATTGCATATGGAGGTAA 57.412 30.769 4.56 0.00 0.00 2.85
5451 6780 8.588290 AGTAAAACATTGCATATGGAGGTAAA 57.412 30.769 4.56 0.00 0.00 2.01
5452 6781 8.686334 AGTAAAACATTGCATATGGAGGTAAAG 58.314 33.333 4.56 0.00 0.00 1.85
5453 6782 6.469782 AAACATTGCATATGGAGGTAAAGG 57.530 37.500 4.56 0.00 0.00 3.11
5454 6783 4.473444 ACATTGCATATGGAGGTAAAGGG 58.527 43.478 4.56 0.00 0.00 3.95
5455 6784 4.167892 ACATTGCATATGGAGGTAAAGGGA 59.832 41.667 4.56 0.00 0.00 4.20
5456 6785 4.871871 TTGCATATGGAGGTAAAGGGAA 57.128 40.909 4.56 0.00 0.00 3.97
5457 6786 4.437682 TGCATATGGAGGTAAAGGGAAG 57.562 45.455 4.56 0.00 0.00 3.46
5458 6787 3.138283 TGCATATGGAGGTAAAGGGAAGG 59.862 47.826 4.56 0.00 0.00 3.46
5459 6788 3.498661 GCATATGGAGGTAAAGGGAAGGG 60.499 52.174 4.56 0.00 0.00 3.95
5460 6789 2.378308 ATGGAGGTAAAGGGAAGGGT 57.622 50.000 0.00 0.00 0.00 4.34
5461 6790 2.143231 TGGAGGTAAAGGGAAGGGTT 57.857 50.000 0.00 0.00 0.00 4.11
5462 6791 2.435104 TGGAGGTAAAGGGAAGGGTTT 58.565 47.619 0.00 0.00 0.00 3.27
5463 6792 2.109304 TGGAGGTAAAGGGAAGGGTTTG 59.891 50.000 0.00 0.00 0.00 2.93
5464 6793 2.556782 GGAGGTAAAGGGAAGGGTTTGG 60.557 54.545 0.00 0.00 0.00 3.28
5465 6794 2.377531 GAGGTAAAGGGAAGGGTTTGGA 59.622 50.000 0.00 0.00 0.00 3.53
5466 6795 2.378886 AGGTAAAGGGAAGGGTTTGGAG 59.621 50.000 0.00 0.00 0.00 3.86
5467 6796 2.377531 GGTAAAGGGAAGGGTTTGGAGA 59.622 50.000 0.00 0.00 0.00 3.71
5468 6797 3.181426 GGTAAAGGGAAGGGTTTGGAGAA 60.181 47.826 0.00 0.00 0.00 2.87
5469 6798 2.980246 AAGGGAAGGGTTTGGAGAAG 57.020 50.000 0.00 0.00 0.00 2.85
5470 6799 1.076438 AGGGAAGGGTTTGGAGAAGG 58.924 55.000 0.00 0.00 0.00 3.46
5471 6800 0.612174 GGGAAGGGTTTGGAGAAGGC 60.612 60.000 0.00 0.00 0.00 4.35
5472 6801 0.112412 GGAAGGGTTTGGAGAAGGCA 59.888 55.000 0.00 0.00 0.00 4.75
5473 6802 1.480498 GGAAGGGTTTGGAGAAGGCAA 60.480 52.381 0.00 0.00 0.00 4.52
5474 6803 2.316108 GAAGGGTTTGGAGAAGGCAAA 58.684 47.619 0.00 0.00 0.00 3.68
5475 6804 1.704641 AGGGTTTGGAGAAGGCAAAC 58.295 50.000 0.00 0.00 37.89 2.93
5476 6805 1.063266 AGGGTTTGGAGAAGGCAAACA 60.063 47.619 1.73 0.00 39.70 2.83
5477 6806 1.068588 GGGTTTGGAGAAGGCAAACAC 59.931 52.381 1.73 0.00 39.70 3.32
5478 6807 1.754226 GGTTTGGAGAAGGCAAACACA 59.246 47.619 1.73 0.00 39.70 3.72
5479 6808 2.167487 GGTTTGGAGAAGGCAAACACAA 59.833 45.455 1.73 0.00 39.70 3.33
5480 6809 3.181466 GGTTTGGAGAAGGCAAACACAAT 60.181 43.478 1.73 0.00 39.70 2.71
5481 6810 3.731652 TTGGAGAAGGCAAACACAATG 57.268 42.857 0.00 0.00 0.00 2.82
5482 6811 2.665165 TGGAGAAGGCAAACACAATGT 58.335 42.857 0.00 0.00 0.00 2.71
5483 6812 3.826524 TGGAGAAGGCAAACACAATGTA 58.173 40.909 0.00 0.00 0.00 2.29
5484 6813 3.820467 TGGAGAAGGCAAACACAATGTAG 59.180 43.478 0.00 0.00 0.00 2.74
5485 6814 4.072131 GGAGAAGGCAAACACAATGTAGA 58.928 43.478 0.00 0.00 0.00 2.59
5486 6815 4.083271 GGAGAAGGCAAACACAATGTAGAC 60.083 45.833 0.00 0.00 0.00 2.59
5487 6816 4.460263 AGAAGGCAAACACAATGTAGACA 58.540 39.130 0.00 0.00 0.00 3.41
5488 6817 4.275936 AGAAGGCAAACACAATGTAGACAC 59.724 41.667 0.00 0.00 0.00 3.67
5489 6818 2.548057 AGGCAAACACAATGTAGACACG 59.452 45.455 0.00 0.00 0.00 4.49
5490 6819 2.350388 GGCAAACACAATGTAGACACGG 60.350 50.000 0.00 0.00 0.00 4.94
5491 6820 2.546368 GCAAACACAATGTAGACACGGA 59.454 45.455 0.00 0.00 0.00 4.69
5492 6821 3.363970 GCAAACACAATGTAGACACGGAG 60.364 47.826 0.00 0.00 0.00 4.63
5493 6822 4.055360 CAAACACAATGTAGACACGGAGA 58.945 43.478 0.00 0.00 0.00 3.71
5494 6823 4.537135 AACACAATGTAGACACGGAGAT 57.463 40.909 0.00 0.00 0.00 2.75
5495 6824 4.537135 ACACAATGTAGACACGGAGATT 57.463 40.909 0.00 0.00 0.00 2.40
5496 6825 4.894784 ACACAATGTAGACACGGAGATTT 58.105 39.130 0.00 0.00 0.00 2.17
5497 6826 5.305585 ACACAATGTAGACACGGAGATTTT 58.694 37.500 0.00 0.00 0.00 1.82
5498 6827 5.763204 ACACAATGTAGACACGGAGATTTTT 59.237 36.000 0.00 0.00 0.00 1.94
5499 6828 6.079763 CACAATGTAGACACGGAGATTTTTG 58.920 40.000 0.00 0.00 0.00 2.44
5500 6829 5.181245 ACAATGTAGACACGGAGATTTTTGG 59.819 40.000 0.00 0.00 0.00 3.28
5501 6830 3.071479 TGTAGACACGGAGATTTTTGGC 58.929 45.455 0.00 0.00 0.00 4.52
5502 6831 1.156736 AGACACGGAGATTTTTGGCG 58.843 50.000 0.00 0.00 0.00 5.69
5503 6832 0.872388 GACACGGAGATTTTTGGCGT 59.128 50.000 0.00 0.00 0.00 5.68
5504 6833 0.591170 ACACGGAGATTTTTGGCGTG 59.409 50.000 0.00 0.00 0.00 5.34
5505 6834 0.109781 CACGGAGATTTTTGGCGTGG 60.110 55.000 0.00 0.00 0.00 4.94
5506 6835 0.536460 ACGGAGATTTTTGGCGTGGT 60.536 50.000 0.00 0.00 0.00 4.16
5507 6836 0.596082 CGGAGATTTTTGGCGTGGTT 59.404 50.000 0.00 0.00 0.00 3.67
5508 6837 1.401018 CGGAGATTTTTGGCGTGGTTC 60.401 52.381 0.00 0.00 0.00 3.62
5509 6838 1.886542 GGAGATTTTTGGCGTGGTTCT 59.113 47.619 0.00 0.00 0.00 3.01
5510 6839 2.351738 GGAGATTTTTGGCGTGGTTCTG 60.352 50.000 0.00 0.00 0.00 3.02
5511 6840 2.552315 GAGATTTTTGGCGTGGTTCTGA 59.448 45.455 0.00 0.00 0.00 3.27
5512 6841 3.157087 AGATTTTTGGCGTGGTTCTGAT 58.843 40.909 0.00 0.00 0.00 2.90
5513 6842 4.331968 AGATTTTTGGCGTGGTTCTGATA 58.668 39.130 0.00 0.00 0.00 2.15
5514 6843 4.396166 AGATTTTTGGCGTGGTTCTGATAG 59.604 41.667 0.00 0.00 0.00 2.08
5515 6844 2.107950 TTTGGCGTGGTTCTGATAGG 57.892 50.000 0.00 0.00 0.00 2.57
5516 6845 0.981183 TTGGCGTGGTTCTGATAGGT 59.019 50.000 0.00 0.00 0.00 3.08
5517 6846 0.249120 TGGCGTGGTTCTGATAGGTG 59.751 55.000 0.00 0.00 0.00 4.00
5518 6847 0.462047 GGCGTGGTTCTGATAGGTGG 60.462 60.000 0.00 0.00 0.00 4.61
5519 6848 0.249398 GCGTGGTTCTGATAGGTGGT 59.751 55.000 0.00 0.00 0.00 4.16
5520 6849 2.007049 GCGTGGTTCTGATAGGTGGTG 61.007 57.143 0.00 0.00 0.00 4.17
5521 6850 1.739067 GTGGTTCTGATAGGTGGTGC 58.261 55.000 0.00 0.00 0.00 5.01
5522 6851 1.279271 GTGGTTCTGATAGGTGGTGCT 59.721 52.381 0.00 0.00 0.00 4.40
5523 6852 2.500098 GTGGTTCTGATAGGTGGTGCTA 59.500 50.000 0.00 0.00 0.00 3.49
5524 6853 3.134804 GTGGTTCTGATAGGTGGTGCTAT 59.865 47.826 0.00 0.00 0.00 2.97
5525 6854 3.388024 TGGTTCTGATAGGTGGTGCTATC 59.612 47.826 0.00 0.00 34.21 2.08
5526 6855 3.553096 GGTTCTGATAGGTGGTGCTATCG 60.553 52.174 0.00 0.00 35.84 2.92
5527 6856 2.945456 TCTGATAGGTGGTGCTATCGT 58.055 47.619 0.00 0.00 35.84 3.73
5528 6857 4.094830 TCTGATAGGTGGTGCTATCGTA 57.905 45.455 0.00 0.00 35.84 3.43
5529 6858 3.819337 TCTGATAGGTGGTGCTATCGTAC 59.181 47.826 0.00 0.00 35.84 3.67
5530 6859 2.551032 TGATAGGTGGTGCTATCGTACG 59.449 50.000 9.53 9.53 35.84 3.67
5531 6860 2.042686 TAGGTGGTGCTATCGTACGT 57.957 50.000 16.05 5.39 0.00 3.57
5532 6861 0.737219 AGGTGGTGCTATCGTACGTC 59.263 55.000 16.05 4.10 0.00 4.34
5533 6862 0.248784 GGTGGTGCTATCGTACGTCC 60.249 60.000 16.05 9.64 0.00 4.79
5534 6863 0.452987 GTGGTGCTATCGTACGTCCA 59.547 55.000 16.05 11.87 0.00 4.02
5535 6864 0.452987 TGGTGCTATCGTACGTCCAC 59.547 55.000 16.05 16.09 0.00 4.02
5536 6865 0.590732 GGTGCTATCGTACGTCCACG 60.591 60.000 16.05 4.49 46.33 4.94
5550 6879 2.743636 TCCACGTTGATGGAGACTTC 57.256 50.000 0.00 0.00 44.14 3.01
5551 6880 1.967779 TCCACGTTGATGGAGACTTCA 59.032 47.619 0.00 0.00 44.14 3.02
5558 6887 3.868757 TGATGGAGACTTCAACCTACG 57.131 47.619 0.00 0.00 41.09 3.51
5559 6888 3.427573 TGATGGAGACTTCAACCTACGA 58.572 45.455 0.00 0.00 41.09 3.43
5560 6889 3.830178 TGATGGAGACTTCAACCTACGAA 59.170 43.478 0.00 0.00 41.09 3.85
5561 6890 3.936372 TGGAGACTTCAACCTACGAAG 57.064 47.619 0.00 0.00 44.46 3.79
5562 6891 4.678309 GATGGAGACTTCAACCTACGAAGG 60.678 50.000 5.04 0.00 43.43 3.46
5563 6892 7.633054 GATGGAGACTTCAACCTACGAAGGG 62.633 52.000 5.04 0.00 43.43 3.95
5565 6894 3.760684 GAGACTTCAACCTACGAAGGGTA 59.239 47.826 5.04 0.00 42.79 3.69
5566 6895 4.154942 AGACTTCAACCTACGAAGGGTAA 58.845 43.478 5.04 0.00 42.79 2.85
5567 6896 4.021632 AGACTTCAACCTACGAAGGGTAAC 60.022 45.833 5.04 0.00 42.79 2.50
5568 6897 3.248266 CTTCAACCTACGAAGGGTAACG 58.752 50.000 0.00 0.00 42.79 3.18
5569 6898 1.545582 TCAACCTACGAAGGGTAACGG 59.454 52.381 0.00 0.00 42.79 4.44
5570 6899 1.273327 CAACCTACGAAGGGTAACGGT 59.727 52.381 0.00 0.00 42.79 4.83
5571 6900 1.970640 AACCTACGAAGGGTAACGGTT 59.029 47.619 0.00 0.00 42.87 4.44
5572 6901 2.000429 CCTACGAAGGGTAACGGTTG 58.000 55.000 3.07 0.00 39.48 3.77
5573 6902 1.273327 CCTACGAAGGGTAACGGTTGT 59.727 52.381 3.07 0.00 39.48 3.32
5574 6903 2.331194 CTACGAAGGGTAACGGTTGTG 58.669 52.381 3.07 0.00 37.60 3.33
5575 6904 0.881600 ACGAAGGGTAACGGTTGTGC 60.882 55.000 3.07 0.00 37.60 4.57
5576 6905 1.864176 GAAGGGTAACGGTTGTGCG 59.136 57.895 3.07 0.00 37.60 5.34
5577 6906 0.600782 GAAGGGTAACGGTTGTGCGA 60.601 55.000 3.07 0.00 37.60 5.10
5578 6907 0.601841 AAGGGTAACGGTTGTGCGAG 60.602 55.000 3.07 0.00 37.60 5.03
5579 6908 1.301165 GGGTAACGGTTGTGCGAGT 60.301 57.895 3.07 0.00 37.60 4.18
5580 6909 1.287041 GGGTAACGGTTGTGCGAGTC 61.287 60.000 3.07 0.00 37.60 3.36
5581 6910 0.319297 GGTAACGGTTGTGCGAGTCT 60.319 55.000 3.07 0.00 0.00 3.24
5582 6911 1.068333 GGTAACGGTTGTGCGAGTCTA 60.068 52.381 3.07 0.00 0.00 2.59
5583 6912 1.981533 GTAACGGTTGTGCGAGTCTAC 59.018 52.381 3.07 0.00 0.00 2.59
5584 6913 0.662374 AACGGTTGTGCGAGTCTACG 60.662 55.000 0.00 0.00 0.00 3.51
5585 6914 1.800315 CGGTTGTGCGAGTCTACGG 60.800 63.158 0.00 0.00 0.00 4.02
5586 6915 1.582968 GGTTGTGCGAGTCTACGGA 59.417 57.895 0.00 0.00 0.00 4.69
5587 6916 0.456312 GGTTGTGCGAGTCTACGGAG 60.456 60.000 0.00 0.00 33.91 4.63
5588 6917 0.456312 GTTGTGCGAGTCTACGGAGG 60.456 60.000 0.00 0.00 33.91 4.30
5589 6918 1.592400 TTGTGCGAGTCTACGGAGGG 61.592 60.000 0.00 0.00 33.91 4.30
5590 6919 3.138798 TGCGAGTCTACGGAGGGC 61.139 66.667 0.00 0.00 0.00 5.19
5591 6920 2.829458 GCGAGTCTACGGAGGGCT 60.829 66.667 0.00 0.00 0.00 5.19
5592 6921 2.836793 GCGAGTCTACGGAGGGCTC 61.837 68.421 9.27 9.27 0.00 4.70
5593 6922 2.188161 CGAGTCTACGGAGGGCTCC 61.188 68.421 12.44 0.00 46.18 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
121 122 6.268158 TGATGCAATGTAGATGCCCATAATTT 59.732 34.615 0.00 0.00 43.16 1.82
122 123 5.776208 TGATGCAATGTAGATGCCCATAATT 59.224 36.000 0.00 0.00 43.16 1.40
136 137 3.541996 TGACGGTAGATGATGCAATGT 57.458 42.857 0.00 0.00 0.00 2.71
167 168 1.901591 TCCGGGCGAAGGTAGTATAG 58.098 55.000 0.00 0.00 0.00 1.31
175 176 1.014352 CAACTAATTCCGGGCGAAGG 58.986 55.000 0.00 0.00 32.78 3.46
181 182 1.006832 CAGCGACAACTAATTCCGGG 58.993 55.000 0.00 0.00 0.00 5.73
182 183 2.004583 TCAGCGACAACTAATTCCGG 57.995 50.000 0.00 0.00 0.00 5.14
183 184 4.334443 CATTTCAGCGACAACTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
225 226 5.734498 GCTCAAACAGATGTATTTAACGCTG 59.266 40.000 0.00 0.00 38.43 5.18
228 229 5.952064 GTCGCTCAAACAGATGTATTTAACG 59.048 40.000 0.00 0.00 0.00 3.18
232 233 5.940192 TTGTCGCTCAAACAGATGTATTT 57.060 34.783 0.00 0.00 32.64 1.40
241 242 6.855914 GTCTGAAATTATTTGTCGCTCAAACA 59.144 34.615 0.00 0.00 46.77 2.83
242 243 6.031417 CGTCTGAAATTATTTGTCGCTCAAAC 59.969 38.462 0.00 0.00 46.77 2.93
255 256 6.448006 CGGTATTCTCTCCGTCTGAAATTAT 58.552 40.000 0.00 0.00 41.58 1.28
271 272 5.070446 TGAAGAATGCTATGGACGGTATTCT 59.930 40.000 0.00 0.00 43.17 2.40
279 280 9.585099 CTTATAGAGATGAAGAATGCTATGGAC 57.415 37.037 0.00 0.00 0.00 4.02
285 286 9.146586 AGAGAACTTATAGAGATGAAGAATGCT 57.853 33.333 0.00 0.00 0.00 3.79
305 306 8.778358 GGGTAATTGTGATGATCATTAGAGAAC 58.222 37.037 10.14 4.05 0.00 3.01
322 323 1.913778 GGGACGTTTGGGGTAATTGT 58.086 50.000 0.00 0.00 0.00 2.71
338 339 1.271856 TTGTAGCATCCAGAACGGGA 58.728 50.000 0.00 0.00 42.21 5.14
341 342 5.447279 GGTGTTATTTGTAGCATCCAGAACG 60.447 44.000 0.00 0.00 0.00 3.95
344 345 5.045942 TCTGGTGTTATTTGTAGCATCCAGA 60.046 40.000 0.00 0.00 44.01 3.86
373 374 2.736719 GCTCGCAGTCTATTGCTTCTGA 60.737 50.000 0.00 0.00 41.90 3.27
374 375 1.592081 GCTCGCAGTCTATTGCTTCTG 59.408 52.381 0.00 0.00 41.90 3.02
406 407 1.086696 GCTTTATGCCTTGCTCACGA 58.913 50.000 0.00 0.00 35.15 4.35
414 415 6.070656 TGCATATAGGAAAGCTTTATGCCTT 58.929 36.000 28.34 16.90 42.72 4.35
474 475 5.523916 CCTTCGTTCTGGTTATGGTCTTATG 59.476 44.000 0.00 0.00 0.00 1.90
476 477 4.622220 GCCTTCGTTCTGGTTATGGTCTTA 60.622 45.833 0.00 0.00 0.00 2.10
477 478 3.868754 GCCTTCGTTCTGGTTATGGTCTT 60.869 47.826 0.00 0.00 0.00 3.01
478 479 2.354805 GCCTTCGTTCTGGTTATGGTCT 60.355 50.000 0.00 0.00 0.00 3.85
479 480 2.007608 GCCTTCGTTCTGGTTATGGTC 58.992 52.381 0.00 0.00 0.00 4.02
480 481 1.339727 GGCCTTCGTTCTGGTTATGGT 60.340 52.381 0.00 0.00 0.00 3.55
541 543 1.172175 GGAGCAAAGGAAGAGCTTGG 58.828 55.000 0.00 0.00 39.02 3.61
646 664 3.033184 CCAGCCCATTGTATTTCCATGT 58.967 45.455 0.00 0.00 0.00 3.21
721 744 4.646877 GGGAAAACACGGCCGGGA 62.647 66.667 38.56 0.00 0.00 5.14
870 910 2.355837 GCCGCACGAGAACTGTGA 60.356 61.111 0.00 0.00 39.73 3.58
1055 1108 1.807573 GAGAAGGCCGAAGCAGACG 60.808 63.158 0.00 0.00 42.56 4.18
1069 1122 3.141488 GCGAGGAGAGGCGGAGAA 61.141 66.667 0.00 0.00 0.00 2.87
1171 1224 4.202121 GCACGAAATAGGAGGTCATACAGA 60.202 45.833 0.00 0.00 0.00 3.41
1239 1292 5.279607 CGAATTATCCATACGGGGGACTAAA 60.280 44.000 0.00 0.00 37.23 1.85
1523 1607 1.209504 GCCCAAGTACTGCATCCTACA 59.790 52.381 0.00 0.00 0.00 2.74
1605 1689 7.917720 AACATGTGGTAAAATCAACGTAAAC 57.082 32.000 0.00 0.00 0.00 2.01
1625 1709 7.173390 GCTCCTTAGAACTTGTTCTGTTAACAT 59.827 37.037 21.97 0.00 32.72 2.71
1655 1739 5.565439 GCTTAATATGTCCATCATGGTTGCC 60.565 44.000 2.79 0.00 39.03 4.52
2154 2238 7.875041 ACTAACAGGCACAGATATATGATTGTC 59.125 37.037 3.93 0.00 0.00 3.18
2360 2444 9.492730 AGTTTTTATCCAAATGAGGAATGGTAT 57.507 29.630 0.00 0.00 41.92 2.73
2411 2495 7.444299 AGGAAATCTGCACACAACAATAAAAT 58.556 30.769 0.00 0.00 0.00 1.82
2424 2508 9.547753 TGAAGAATAGTATAAGGAAATCTGCAC 57.452 33.333 0.00 0.00 0.00 4.57
2476 2560 4.898265 TCAATCAACAGGACAAAAATCCCA 59.102 37.500 0.00 0.00 39.91 4.37
2560 2644 9.244799 GTTGTTACTGAAGAAATTCGGAAAAAT 57.755 29.630 3.91 0.00 0.00 1.82
2795 2879 5.016831 GGGTAACTTCAGGATCCAAACAAT 58.983 41.667 15.82 0.00 0.00 2.71
2798 2882 4.302559 AGGGTAACTTCAGGATCCAAAC 57.697 45.455 15.82 0.84 0.00 2.93
2843 2927 3.961484 TGGCATAAACATATCCACCCA 57.039 42.857 0.00 0.00 0.00 4.51
2851 2935 8.532186 ACCATCTTAACAATGGCATAAACATA 57.468 30.769 0.00 0.00 46.38 2.29
2892 2976 5.520376 AAACCAAACTCTGAAACATCAGG 57.480 39.130 6.04 0.56 38.23 3.86
2895 2979 7.875971 ACTGATAAACCAAACTCTGAAACATC 58.124 34.615 0.00 0.00 0.00 3.06
2932 3018 7.010367 CCACGTTATCATTAAGCAATTGCAAAT 59.990 33.333 30.89 24.51 45.16 2.32
2954 3040 0.813184 ATTCTGCAAATGGCTCCACG 59.187 50.000 0.00 0.00 45.15 4.94
2974 3060 5.499004 ACCCCGCATGTATAATGACTTAT 57.501 39.130 0.00 0.00 0.00 1.73
2980 3066 2.356135 GCCTACCCCGCATGTATAATG 58.644 52.381 0.00 0.00 0.00 1.90
2981 3067 1.280998 GGCCTACCCCGCATGTATAAT 59.719 52.381 0.00 0.00 0.00 1.28
3016 3105 4.140782 TCCATATTGCTAGGGAGTAGTCCA 60.141 45.833 18.49 0.00 46.07 4.02
3018 3107 6.420913 TTTCCATATTGCTAGGGAGTAGTC 57.579 41.667 0.00 0.00 38.92 2.59
3100 3597 7.618019 AGGATATCTAACCACAAGCAGATAA 57.382 36.000 2.05 0.00 34.56 1.75
3105 3602 7.715249 GTGAATAAGGATATCTAACCACAAGCA 59.285 37.037 2.05 0.00 0.00 3.91
3106 3603 7.934120 AGTGAATAAGGATATCTAACCACAAGC 59.066 37.037 2.05 0.00 0.00 4.01
3116 3613 7.327064 AGCATCCAAGTGAATAAGGATATCT 57.673 36.000 2.05 0.00 38.77 1.98
3118 3615 7.311549 CCCTAGCATCCAAGTGAATAAGGATAT 60.312 40.741 0.00 0.00 38.77 1.63
3179 3676 1.073897 GCTGCCTTTGAGGACCAGT 59.926 57.895 0.00 0.00 37.67 4.00
3189 3686 0.177604 CTCGAGGATGAGCTGCCTTT 59.822 55.000 3.91 0.00 33.84 3.11
3253 3751 3.817647 GTCCAAGCTTTCACAACATCTCT 59.182 43.478 0.00 0.00 0.00 3.10
3263 3761 2.951642 CTCAGGTTTGTCCAAGCTTTCA 59.048 45.455 0.00 0.00 41.53 2.69
3273 3771 4.083057 GGAGCTTCATTTCTCAGGTTTGTC 60.083 45.833 0.00 0.00 0.00 3.18
3280 3778 4.942852 AGTATCGGAGCTTCATTTCTCAG 58.057 43.478 0.00 0.00 0.00 3.35
3308 3806 9.838339 AGAATTGTTAGTCAAGTTATCCCATAG 57.162 33.333 0.00 0.00 39.55 2.23
3344 3842 6.434028 AGCAGTCAATAAGCCAGATTGTTTTA 59.566 34.615 3.55 0.00 36.02 1.52
3365 3863 7.648142 TGTGGTTATCAGTTAAAGAAAAGCAG 58.352 34.615 0.00 0.00 0.00 4.24
3368 3866 8.792633 TCCATGTGGTTATCAGTTAAAGAAAAG 58.207 33.333 0.00 0.00 36.34 2.27
3437 3935 5.125257 TCACACGTCCTTTTCGTATATACCA 59.875 40.000 7.30 0.00 39.55 3.25
3453 3951 5.282510 CCTCTCCTTTGTATATCACACGTC 58.717 45.833 0.00 0.00 36.69 4.34
3456 3954 4.202367 CCCCCTCTCCTTTGTATATCACAC 60.202 50.000 0.00 0.00 36.69 3.82
3467 3965 1.076438 CCTGTTTCCCCCTCTCCTTT 58.924 55.000 0.00 0.00 0.00 3.11
3494 3992 8.980481 ATCAATAAACCTTATACAGTCCCTTG 57.020 34.615 0.00 0.00 0.00 3.61
3526 4024 4.516698 GGCTACCATCATGTCCATTGTAAG 59.483 45.833 0.00 0.00 0.00 2.34
3548 4046 2.379907 AGGCCCACATATATGAAAGGGG 59.620 50.000 27.90 24.81 37.91 4.79
3549 4047 3.562176 GGAGGCCCACATATATGAAAGGG 60.562 52.174 25.26 25.26 39.28 3.95
3550 4048 3.331889 AGGAGGCCCACATATATGAAAGG 59.668 47.826 19.63 15.66 33.88 3.11
3566 4064 2.371658 AATATTGCTTGGGAGGAGGC 57.628 50.000 0.00 0.00 0.00 4.70
3601 4099 9.408648 ACAGAGGTAATATTTGTTAGGGATTTG 57.591 33.333 0.00 0.00 0.00 2.32
3618 4116 9.193806 ACGTCTTATATTTAGGAACAGAGGTAA 57.806 33.333 0.00 0.00 0.00 2.85
3620 4118 7.657023 ACGTCTTATATTTAGGAACAGAGGT 57.343 36.000 0.00 0.00 0.00 3.85
3628 4126 7.037438 ACTGCGAAAACGTCTTATATTTAGGA 58.963 34.615 0.00 0.00 0.00 2.94
3631 4129 8.242085 TGAACTGCGAAAACGTCTTATATTTA 57.758 30.769 0.00 0.00 0.00 1.40
3632 4130 7.124347 TGAACTGCGAAAACGTCTTATATTT 57.876 32.000 0.00 0.00 0.00 1.40
3642 4140 6.336392 CAGTTTAATTTGAACTGCGAAAACG 58.664 36.000 17.76 0.00 45.02 3.60
3651 4149 6.131544 AGACGTTGCAGTTTAATTTGAACT 57.868 33.333 1.00 1.00 37.82 3.01
3652 4150 6.806120 AAGACGTTGCAGTTTAATTTGAAC 57.194 33.333 0.00 0.00 0.00 3.18
3658 4156 9.567848 CCAAAATATAAGACGTTGCAGTTTAAT 57.432 29.630 0.00 0.00 0.00 1.40
3659 4157 8.784994 TCCAAAATATAAGACGTTGCAGTTTAA 58.215 29.630 0.00 0.00 0.00 1.52
3660 4158 8.325421 TCCAAAATATAAGACGTTGCAGTTTA 57.675 30.769 0.00 0.00 0.00 2.01
3662 4160 6.811253 TCCAAAATATAAGACGTTGCAGTT 57.189 33.333 0.00 0.00 0.00 3.16
3663 4161 6.205853 TGTTCCAAAATATAAGACGTTGCAGT 59.794 34.615 0.00 0.00 0.00 4.40
3666 4164 6.837992 TCTGTTCCAAAATATAAGACGTTGC 58.162 36.000 0.00 0.00 0.00 4.17
3667 4165 7.414098 CCCTCTGTTCCAAAATATAAGACGTTG 60.414 40.741 0.00 0.00 0.00 4.10
3669 4167 6.070424 TCCCTCTGTTCCAAAATATAAGACGT 60.070 38.462 0.00 0.00 0.00 4.34
3670 4168 6.346096 TCCCTCTGTTCCAAAATATAAGACG 58.654 40.000 0.00 0.00 0.00 4.18
3671 4169 8.753497 ATTCCCTCTGTTCCAAAATATAAGAC 57.247 34.615 0.00 0.00 0.00 3.01
3681 4845 4.591321 ATTGCTATTCCCTCTGTTCCAA 57.409 40.909 0.00 0.00 0.00 3.53
3685 4849 6.915786 AGGATTAATTGCTATTCCCTCTGTT 58.084 36.000 0.00 0.00 32.48 3.16
3726 4894 6.980577 TCCAACAAAATATGGATAAGGACCT 58.019 36.000 0.00 0.00 40.74 3.85
3742 4910 7.341769 CCCTTACATCCAAGAATATCCAACAAA 59.658 37.037 0.00 0.00 0.00 2.83
3744 4912 6.364701 CCCTTACATCCAAGAATATCCAACA 58.635 40.000 0.00 0.00 0.00 3.33
3784 4952 4.610945 ACTCTTTGTTGTTTGCATGCTAC 58.389 39.130 20.33 16.74 0.00 3.58
3796 4964 5.741388 AACTCAGTTGCTACTCTTTGTTG 57.259 39.130 0.00 0.00 30.26 3.33
3799 4967 5.741388 ACAAACTCAGTTGCTACTCTTTG 57.259 39.130 15.22 15.22 32.06 2.77
3821 4989 3.758023 CCTTATGTGTTGTGGATGAGCAA 59.242 43.478 0.00 0.00 0.00 3.91
3822 4990 3.346315 CCTTATGTGTTGTGGATGAGCA 58.654 45.455 0.00 0.00 0.00 4.26
3823 4991 2.098117 GCCTTATGTGTTGTGGATGAGC 59.902 50.000 0.00 0.00 0.00 4.26
3824 4992 3.614092 AGCCTTATGTGTTGTGGATGAG 58.386 45.455 0.00 0.00 0.00 2.90
3825 4993 3.719268 AGCCTTATGTGTTGTGGATGA 57.281 42.857 0.00 0.00 0.00 2.92
3826 4994 3.507233 ACAAGCCTTATGTGTTGTGGATG 59.493 43.478 0.00 0.00 31.94 3.51
3827 4995 3.758554 GACAAGCCTTATGTGTTGTGGAT 59.241 43.478 0.00 0.00 33.30 3.41
3828 4996 3.146066 GACAAGCCTTATGTGTTGTGGA 58.854 45.455 0.00 0.00 33.30 4.02
3829 4997 3.058016 CAGACAAGCCTTATGTGTTGTGG 60.058 47.826 0.00 0.00 33.30 4.17
3830 4998 3.610114 GCAGACAAGCCTTATGTGTTGTG 60.610 47.826 0.00 0.00 33.30 3.33
3831 4999 2.554032 GCAGACAAGCCTTATGTGTTGT 59.446 45.455 0.00 0.00 35.84 3.32
3832 5000 2.816087 AGCAGACAAGCCTTATGTGTTG 59.184 45.455 0.00 0.00 34.23 3.33
3833 5001 3.077359 GAGCAGACAAGCCTTATGTGTT 58.923 45.455 0.00 0.00 34.23 3.32
3834 5002 2.304180 AGAGCAGACAAGCCTTATGTGT 59.696 45.455 0.00 0.00 34.23 3.72
3835 5003 2.983229 AGAGCAGACAAGCCTTATGTG 58.017 47.619 0.00 0.00 34.23 3.21
3836 5004 3.772025 AGTAGAGCAGACAAGCCTTATGT 59.228 43.478 0.00 0.00 34.23 2.29
3837 5005 4.399004 AGTAGAGCAGACAAGCCTTATG 57.601 45.455 0.00 0.00 34.23 1.90
3838 5006 5.423886 GAAAGTAGAGCAGACAAGCCTTAT 58.576 41.667 0.00 0.00 34.23 1.73
3839 5007 4.322801 GGAAAGTAGAGCAGACAAGCCTTA 60.323 45.833 0.00 0.00 34.23 2.69
3840 5008 3.558109 GGAAAGTAGAGCAGACAAGCCTT 60.558 47.826 0.00 0.00 34.23 4.35
3841 5009 2.027653 GGAAAGTAGAGCAGACAAGCCT 60.028 50.000 0.00 0.00 34.23 4.58
3842 5010 2.289694 TGGAAAGTAGAGCAGACAAGCC 60.290 50.000 0.00 0.00 34.23 4.35
3843 5011 3.045601 TGGAAAGTAGAGCAGACAAGC 57.954 47.619 0.00 0.00 0.00 4.01
3844 5012 4.081198 AGGATGGAAAGTAGAGCAGACAAG 60.081 45.833 0.00 0.00 0.00 3.16
3845 5013 3.840666 AGGATGGAAAGTAGAGCAGACAA 59.159 43.478 0.00 0.00 0.00 3.18
3846 5014 3.445008 AGGATGGAAAGTAGAGCAGACA 58.555 45.455 0.00 0.00 0.00 3.41
3847 5015 4.081420 TGAAGGATGGAAAGTAGAGCAGAC 60.081 45.833 0.00 0.00 0.00 3.51
3848 5016 4.096681 TGAAGGATGGAAAGTAGAGCAGA 58.903 43.478 0.00 0.00 0.00 4.26
3849 5017 4.161189 TCTGAAGGATGGAAAGTAGAGCAG 59.839 45.833 0.00 0.00 0.00 4.24
3850 5018 4.096681 TCTGAAGGATGGAAAGTAGAGCA 58.903 43.478 0.00 0.00 0.00 4.26
3851 5019 4.744795 TCTGAAGGATGGAAAGTAGAGC 57.255 45.455 0.00 0.00 0.00 4.09
3852 5020 7.334090 TCATTTCTGAAGGATGGAAAGTAGAG 58.666 38.462 3.06 0.00 33.41 2.43
3853 5021 7.257790 TCATTTCTGAAGGATGGAAAGTAGA 57.742 36.000 3.06 0.00 33.41 2.59
3854 5022 9.618890 TTATCATTTCTGAAGGATGGAAAGTAG 57.381 33.333 13.60 0.00 36.95 2.57
3855 5023 9.396022 GTTATCATTTCTGAAGGATGGAAAGTA 57.604 33.333 13.60 0.00 36.95 2.24
3918 5226 6.645306 TGGGTTCTCATCATATTGTTTACGA 58.355 36.000 0.00 0.00 0.00 3.43
3932 5240 9.520515 GAACCATGTAATATATTGGGTTCTCAT 57.479 33.333 26.08 12.46 45.72 2.90
3970 5278 3.691609 GCCTAAAATCCTCAACCAGACTG 59.308 47.826 0.00 0.00 0.00 3.51
3971 5279 3.330701 TGCCTAAAATCCTCAACCAGACT 59.669 43.478 0.00 0.00 0.00 3.24
3996 5304 3.466836 ACGAATGATGTGTTGTGTGACT 58.533 40.909 0.00 0.00 0.00 3.41
4034 5342 3.569701 GGCCCTGTATTATGAATGGTGTG 59.430 47.826 0.00 0.00 0.00 3.82
4035 5343 3.436470 GGGCCCTGTATTATGAATGGTGT 60.436 47.826 17.04 0.00 0.00 4.16
4036 5344 3.157087 GGGCCCTGTATTATGAATGGTG 58.843 50.000 17.04 0.00 0.00 4.17
4037 5345 2.788807 TGGGCCCTGTATTATGAATGGT 59.211 45.455 25.70 0.00 0.00 3.55
4038 5346 3.181429 ACTGGGCCCTGTATTATGAATGG 60.181 47.826 31.31 0.00 0.00 3.16
4043 5352 3.117512 AGGAAACTGGGCCCTGTATTATG 60.118 47.826 32.28 10.25 41.13 1.90
4052 5361 2.508300 TCACTATAAGGAAACTGGGCCC 59.492 50.000 17.59 17.59 42.68 5.80
4053 5362 3.926058 TCACTATAAGGAAACTGGGCC 57.074 47.619 0.00 0.00 42.68 5.80
4079 5388 7.173390 GCCTAGAACCAGTATTGAATATTGACC 59.827 40.741 9.00 0.00 0.00 4.02
4081 5390 7.933577 CAGCCTAGAACCAGTATTGAATATTGA 59.066 37.037 9.00 0.00 0.00 2.57
4084 5393 7.380423 ACAGCCTAGAACCAGTATTGAATAT 57.620 36.000 0.00 0.00 0.00 1.28
4085 5394 6.808321 ACAGCCTAGAACCAGTATTGAATA 57.192 37.500 0.00 0.00 0.00 1.75
4086 5395 5.700402 ACAGCCTAGAACCAGTATTGAAT 57.300 39.130 0.00 0.00 0.00 2.57
4087 5396 5.499004 AACAGCCTAGAACCAGTATTGAA 57.501 39.130 0.00 0.00 0.00 2.69
4091 5400 4.030913 TGCTAACAGCCTAGAACCAGTAT 58.969 43.478 0.00 0.00 41.51 2.12
4094 5403 3.003480 GTTGCTAACAGCCTAGAACCAG 58.997 50.000 0.00 0.00 41.51 4.00
4116 5426 6.761242 CGAATAGTTATCACATGAGGGAACAA 59.239 38.462 0.00 0.00 0.00 2.83
4137 5447 8.093927 ACCATTTACCAATGAAATGAAACGAAT 58.906 29.630 9.16 0.00 43.85 3.34
4140 5450 8.749841 TTACCATTTACCAATGAAATGAAACG 57.250 30.769 9.16 0.00 43.85 3.60
4159 5469 9.731001 AGGCCTAAGCTATACTATATTTACCAT 57.269 33.333 1.29 0.00 39.73 3.55
4160 5470 8.978472 CAGGCCTAAGCTATACTATATTTACCA 58.022 37.037 3.98 0.00 39.73 3.25
4161 5471 9.198475 TCAGGCCTAAGCTATACTATATTTACC 57.802 37.037 3.98 0.00 39.73 2.85
4163 5473 9.992442 AGTCAGGCCTAAGCTATACTATATTTA 57.008 33.333 3.98 0.00 39.73 1.40
4164 5474 8.754080 CAGTCAGGCCTAAGCTATACTATATTT 58.246 37.037 3.98 0.00 39.73 1.40
4165 5475 7.147811 GCAGTCAGGCCTAAGCTATACTATATT 60.148 40.741 3.98 0.00 39.73 1.28
4166 5476 6.322712 GCAGTCAGGCCTAAGCTATACTATAT 59.677 42.308 3.98 0.00 39.73 0.86
4182 5492 4.261801 TCCTTTAATAACAGCAGTCAGGC 58.738 43.478 0.00 0.00 0.00 4.85
4183 5493 6.678900 GCAATCCTTTAATAACAGCAGTCAGG 60.679 42.308 0.00 0.00 0.00 3.86
4184 5494 6.261118 GCAATCCTTTAATAACAGCAGTCAG 58.739 40.000 0.00 0.00 0.00 3.51
4187 5497 5.264395 AGGCAATCCTTTAATAACAGCAGT 58.736 37.500 0.00 0.00 40.66 4.40
4213 5534 7.344871 AGGAAGCTATAGTGTATGGTGTAAACT 59.655 37.037 0.84 0.00 0.00 2.66
4214 5535 7.498443 AGGAAGCTATAGTGTATGGTGTAAAC 58.502 38.462 0.84 0.00 0.00 2.01
4215 5536 7.670605 AGGAAGCTATAGTGTATGGTGTAAA 57.329 36.000 0.84 0.00 0.00 2.01
4236 5557 6.829298 CAGTAGTCATAGTCAGGAAAGTAGGA 59.171 42.308 0.00 0.00 0.00 2.94
4270 5591 7.822334 TGGAACGAACATGAGAAAAGTATATGT 59.178 33.333 0.00 0.00 33.73 2.29
4274 5595 6.485313 TGTTGGAACGAACATGAGAAAAGTAT 59.515 34.615 0.00 0.00 30.75 2.12
4281 5602 4.819088 TGATTTGTTGGAACGAACATGAGA 59.181 37.500 0.00 0.00 35.77 3.27
4291 5612 8.730680 AGATGTAGTTACATGATTTGTTGGAAC 58.269 33.333 9.38 0.00 46.20 3.62
4297 5618 9.102757 CAGCTAAGATGTAGTTACATGATTTGT 57.897 33.333 9.38 0.00 46.20 2.83
4387 5708 0.977395 GGTGAAGCCTGTAGACCTGT 59.023 55.000 0.00 0.00 0.00 4.00
4623 5952 4.747108 CGGCTATACTCATTGACTCCTTTG 59.253 45.833 0.00 0.00 0.00 2.77
4628 5957 2.297597 AGGCGGCTATACTCATTGACTC 59.702 50.000 11.03 0.00 0.00 3.36
4646 5975 5.525378 CAGGTAGATCAATTTACAGTGAGGC 59.475 44.000 0.00 0.00 28.55 4.70
4759 6088 6.925610 TCAGTTTATTCAATTCCAGATCGG 57.074 37.500 0.00 0.00 0.00 4.18
4804 6133 3.118629 TGCATCGAACATCCTAAAGAGCT 60.119 43.478 0.00 0.00 0.00 4.09
4929 6258 3.748568 GGAGTGGTGACTGTTGAGAATTC 59.251 47.826 0.00 0.00 30.16 2.17
5343 6672 9.282569 TGCTAAAATCTGCCAACAATTAAAATT 57.717 25.926 0.00 0.00 0.00 1.82
5344 6673 8.845413 TGCTAAAATCTGCCAACAATTAAAAT 57.155 26.923 0.00 0.00 0.00 1.82
5345 6674 8.668510 TTGCTAAAATCTGCCAACAATTAAAA 57.331 26.923 0.00 0.00 0.00 1.52
5346 6675 8.845413 ATTGCTAAAATCTGCCAACAATTAAA 57.155 26.923 0.00 0.00 0.00 1.52
5347 6676 8.845413 AATTGCTAAAATCTGCCAACAATTAA 57.155 26.923 0.00 0.00 35.39 1.40
5348 6677 9.585099 CTAATTGCTAAAATCTGCCAACAATTA 57.415 29.630 0.00 0.00 37.57 1.40
5349 6678 8.096414 ACTAATTGCTAAAATCTGCCAACAATT 58.904 29.630 0.00 0.00 39.21 2.32
5350 6679 7.614494 ACTAATTGCTAAAATCTGCCAACAAT 58.386 30.769 0.00 0.00 0.00 2.71
5351 6680 6.991938 ACTAATTGCTAAAATCTGCCAACAA 58.008 32.000 0.00 0.00 0.00 2.83
5352 6681 6.588719 ACTAATTGCTAAAATCTGCCAACA 57.411 33.333 0.00 0.00 0.00 3.33
5353 6682 7.535139 TGTACTAATTGCTAAAATCTGCCAAC 58.465 34.615 0.00 0.00 0.00 3.77
5354 6683 7.695480 TGTACTAATTGCTAAAATCTGCCAA 57.305 32.000 0.00 0.00 0.00 4.52
5355 6684 7.393234 ACTTGTACTAATTGCTAAAATCTGCCA 59.607 33.333 0.00 0.00 0.00 4.92
5356 6685 7.762382 ACTTGTACTAATTGCTAAAATCTGCC 58.238 34.615 0.00 0.00 0.00 4.85
5357 6686 8.450964 TGACTTGTACTAATTGCTAAAATCTGC 58.549 33.333 0.00 0.00 0.00 4.26
5360 6689 9.278734 GCTTGACTTGTACTAATTGCTAAAATC 57.721 33.333 0.00 0.00 0.00 2.17
5361 6690 8.792633 TGCTTGACTTGTACTAATTGCTAAAAT 58.207 29.630 0.00 0.00 0.00 1.82
5362 6691 8.160521 TGCTTGACTTGTACTAATTGCTAAAA 57.839 30.769 0.00 0.00 0.00 1.52
5363 6692 7.737972 TGCTTGACTTGTACTAATTGCTAAA 57.262 32.000 0.00 0.00 0.00 1.85
5364 6693 7.737972 TTGCTTGACTTGTACTAATTGCTAA 57.262 32.000 0.00 0.00 0.00 3.09
5365 6694 7.606073 TGATTGCTTGACTTGTACTAATTGCTA 59.394 33.333 0.00 0.00 0.00 3.49
5366 6695 6.430925 TGATTGCTTGACTTGTACTAATTGCT 59.569 34.615 0.00 0.00 0.00 3.91
5367 6696 6.611381 TGATTGCTTGACTTGTACTAATTGC 58.389 36.000 0.00 0.00 0.00 3.56
5368 6697 8.075574 TGTTGATTGCTTGACTTGTACTAATTG 58.924 33.333 0.00 0.00 0.00 2.32
5369 6698 8.165239 TGTTGATTGCTTGACTTGTACTAATT 57.835 30.769 0.00 0.00 0.00 1.40
5370 6699 7.744087 TGTTGATTGCTTGACTTGTACTAAT 57.256 32.000 0.00 0.00 0.00 1.73
5371 6700 7.744087 ATGTTGATTGCTTGACTTGTACTAA 57.256 32.000 0.00 0.00 0.00 2.24
5372 6701 7.875554 TGTATGTTGATTGCTTGACTTGTACTA 59.124 33.333 0.00 0.00 0.00 1.82
5373 6702 6.710295 TGTATGTTGATTGCTTGACTTGTACT 59.290 34.615 0.00 0.00 0.00 2.73
5374 6703 6.797033 GTGTATGTTGATTGCTTGACTTGTAC 59.203 38.462 0.00 0.00 0.00 2.90
5375 6704 6.484977 TGTGTATGTTGATTGCTTGACTTGTA 59.515 34.615 0.00 0.00 0.00 2.41
5376 6705 5.299028 TGTGTATGTTGATTGCTTGACTTGT 59.701 36.000 0.00 0.00 0.00 3.16
5377 6706 5.761003 TGTGTATGTTGATTGCTTGACTTG 58.239 37.500 0.00 0.00 0.00 3.16
5378 6707 6.384224 CATGTGTATGTTGATTGCTTGACTT 58.616 36.000 0.00 0.00 0.00 3.01
5379 6708 5.620654 GCATGTGTATGTTGATTGCTTGACT 60.621 40.000 0.00 0.00 36.65 3.41
5380 6709 4.560035 GCATGTGTATGTTGATTGCTTGAC 59.440 41.667 0.00 0.00 36.65 3.18
5381 6710 4.217983 TGCATGTGTATGTTGATTGCTTGA 59.782 37.500 0.00 0.00 36.65 3.02
5382 6711 4.487019 TGCATGTGTATGTTGATTGCTTG 58.513 39.130 0.00 0.00 36.65 4.01
5383 6712 4.787260 TGCATGTGTATGTTGATTGCTT 57.213 36.364 0.00 0.00 36.65 3.91
5384 6713 4.787260 TTGCATGTGTATGTTGATTGCT 57.213 36.364 0.00 0.00 36.65 3.91
5385 6714 5.808540 AGAATTGCATGTGTATGTTGATTGC 59.191 36.000 0.00 0.00 36.65 3.56
5386 6715 8.914328 TTAGAATTGCATGTGTATGTTGATTG 57.086 30.769 0.00 0.00 36.65 2.67
5387 6716 8.959548 TCTTAGAATTGCATGTGTATGTTGATT 58.040 29.630 0.00 0.00 36.65 2.57
5388 6717 8.510243 TCTTAGAATTGCATGTGTATGTTGAT 57.490 30.769 0.00 0.00 36.65 2.57
5389 6718 7.607607 ACTCTTAGAATTGCATGTGTATGTTGA 59.392 33.333 0.00 0.00 36.65 3.18
5390 6719 7.755591 ACTCTTAGAATTGCATGTGTATGTTG 58.244 34.615 0.00 0.00 36.65 3.33
5391 6720 7.928307 ACTCTTAGAATTGCATGTGTATGTT 57.072 32.000 0.00 0.00 36.65 2.71
5392 6721 7.225538 GCTACTCTTAGAATTGCATGTGTATGT 59.774 37.037 0.00 0.00 36.65 2.29
5393 6722 7.225341 TGCTACTCTTAGAATTGCATGTGTATG 59.775 37.037 0.00 0.00 37.36 2.39
5394 6723 7.275183 TGCTACTCTTAGAATTGCATGTGTAT 58.725 34.615 0.00 0.00 0.00 2.29
5395 6724 6.639563 TGCTACTCTTAGAATTGCATGTGTA 58.360 36.000 0.00 0.00 0.00 2.90
5396 6725 5.491070 TGCTACTCTTAGAATTGCATGTGT 58.509 37.500 0.00 0.00 0.00 3.72
5397 6726 5.503683 GCTGCTACTCTTAGAATTGCATGTG 60.504 44.000 0.07 0.00 0.00 3.21
5398 6727 4.574013 GCTGCTACTCTTAGAATTGCATGT 59.426 41.667 0.07 0.00 0.00 3.21
5399 6728 4.318618 CGCTGCTACTCTTAGAATTGCATG 60.319 45.833 0.07 0.00 0.00 4.06
5400 6729 3.806521 CGCTGCTACTCTTAGAATTGCAT 59.193 43.478 0.07 0.00 0.00 3.96
5401 6730 3.119137 TCGCTGCTACTCTTAGAATTGCA 60.119 43.478 0.00 0.00 0.00 4.08
5402 6731 3.448686 TCGCTGCTACTCTTAGAATTGC 58.551 45.455 0.00 0.00 0.00 3.56
5403 6732 6.091441 ACTTTTCGCTGCTACTCTTAGAATTG 59.909 38.462 0.00 0.00 0.00 2.32
5404 6733 6.166982 ACTTTTCGCTGCTACTCTTAGAATT 58.833 36.000 0.00 0.00 0.00 2.17
5405 6734 5.725362 ACTTTTCGCTGCTACTCTTAGAAT 58.275 37.500 0.00 0.00 0.00 2.40
5406 6735 5.135508 ACTTTTCGCTGCTACTCTTAGAA 57.864 39.130 0.00 0.00 0.00 2.10
5407 6736 4.785511 ACTTTTCGCTGCTACTCTTAGA 57.214 40.909 0.00 0.00 0.00 2.10
5408 6737 6.946229 TTTACTTTTCGCTGCTACTCTTAG 57.054 37.500 0.00 0.00 0.00 2.18
5409 6738 6.702723 TGTTTTACTTTTCGCTGCTACTCTTA 59.297 34.615 0.00 0.00 0.00 2.10
5410 6739 5.526111 TGTTTTACTTTTCGCTGCTACTCTT 59.474 36.000 0.00 0.00 0.00 2.85
5411 6740 5.054477 TGTTTTACTTTTCGCTGCTACTCT 58.946 37.500 0.00 0.00 0.00 3.24
5412 6741 5.338614 TGTTTTACTTTTCGCTGCTACTC 57.661 39.130 0.00 0.00 0.00 2.59
5413 6742 5.941948 ATGTTTTACTTTTCGCTGCTACT 57.058 34.783 0.00 0.00 0.00 2.57
5414 6743 5.164187 GCAATGTTTTACTTTTCGCTGCTAC 60.164 40.000 0.00 0.00 0.00 3.58
5415 6744 4.915085 GCAATGTTTTACTTTTCGCTGCTA 59.085 37.500 0.00 0.00 0.00 3.49
5416 6745 3.735746 GCAATGTTTTACTTTTCGCTGCT 59.264 39.130 0.00 0.00 0.00 4.24
5417 6746 3.489047 TGCAATGTTTTACTTTTCGCTGC 59.511 39.130 0.00 0.00 0.00 5.25
5418 6747 5.827568 ATGCAATGTTTTACTTTTCGCTG 57.172 34.783 0.00 0.00 0.00 5.18
5419 6748 6.531240 CCATATGCAATGTTTTACTTTTCGCT 59.469 34.615 0.00 0.00 0.00 4.93
5420 6749 6.529829 TCCATATGCAATGTTTTACTTTTCGC 59.470 34.615 0.00 0.00 0.00 4.70
5421 6750 7.220683 CCTCCATATGCAATGTTTTACTTTTCG 59.779 37.037 0.00 0.00 0.00 3.46
5422 6751 8.034804 ACCTCCATATGCAATGTTTTACTTTTC 58.965 33.333 0.00 0.00 0.00 2.29
5423 6752 7.906327 ACCTCCATATGCAATGTTTTACTTTT 58.094 30.769 0.00 0.00 0.00 2.27
5424 6753 7.480760 ACCTCCATATGCAATGTTTTACTTT 57.519 32.000 0.00 0.00 0.00 2.66
5425 6754 8.588290 TTACCTCCATATGCAATGTTTTACTT 57.412 30.769 0.00 0.00 0.00 2.24
5426 6755 8.588290 TTTACCTCCATATGCAATGTTTTACT 57.412 30.769 0.00 0.00 0.00 2.24
5427 6756 7.920682 CCTTTACCTCCATATGCAATGTTTTAC 59.079 37.037 0.00 0.00 0.00 2.01
5428 6757 7.069331 CCCTTTACCTCCATATGCAATGTTTTA 59.931 37.037 0.00 0.00 0.00 1.52
5429 6758 6.127083 CCCTTTACCTCCATATGCAATGTTTT 60.127 38.462 0.00 0.00 0.00 2.43
5430 6759 5.363580 CCCTTTACCTCCATATGCAATGTTT 59.636 40.000 0.00 0.00 0.00 2.83
5431 6760 4.895297 CCCTTTACCTCCATATGCAATGTT 59.105 41.667 0.00 0.00 0.00 2.71
5432 6761 4.167892 TCCCTTTACCTCCATATGCAATGT 59.832 41.667 0.00 0.00 0.00 2.71
5433 6762 4.728772 TCCCTTTACCTCCATATGCAATG 58.271 43.478 0.00 0.00 0.00 2.82
5434 6763 5.388654 CTTCCCTTTACCTCCATATGCAAT 58.611 41.667 0.00 0.00 0.00 3.56
5435 6764 4.386312 CCTTCCCTTTACCTCCATATGCAA 60.386 45.833 0.00 0.00 0.00 4.08
5436 6765 3.138283 CCTTCCCTTTACCTCCATATGCA 59.862 47.826 0.00 0.00 0.00 3.96
5437 6766 3.498661 CCCTTCCCTTTACCTCCATATGC 60.499 52.174 0.00 0.00 0.00 3.14
5438 6767 3.722101 ACCCTTCCCTTTACCTCCATATG 59.278 47.826 0.00 0.00 0.00 1.78
5439 6768 4.035967 ACCCTTCCCTTTACCTCCATAT 57.964 45.455 0.00 0.00 0.00 1.78
5440 6769 3.519370 ACCCTTCCCTTTACCTCCATA 57.481 47.619 0.00 0.00 0.00 2.74
5441 6770 2.378308 ACCCTTCCCTTTACCTCCAT 57.622 50.000 0.00 0.00 0.00 3.41
5442 6771 2.109304 CAAACCCTTCCCTTTACCTCCA 59.891 50.000 0.00 0.00 0.00 3.86
5443 6772 2.556782 CCAAACCCTTCCCTTTACCTCC 60.557 54.545 0.00 0.00 0.00 4.30
5444 6773 2.377531 TCCAAACCCTTCCCTTTACCTC 59.622 50.000 0.00 0.00 0.00 3.85
5445 6774 2.378886 CTCCAAACCCTTCCCTTTACCT 59.621 50.000 0.00 0.00 0.00 3.08
5446 6775 2.377531 TCTCCAAACCCTTCCCTTTACC 59.622 50.000 0.00 0.00 0.00 2.85
5447 6776 3.801307 TCTCCAAACCCTTCCCTTTAC 57.199 47.619 0.00 0.00 0.00 2.01
5448 6777 3.075432 CCTTCTCCAAACCCTTCCCTTTA 59.925 47.826 0.00 0.00 0.00 1.85
5449 6778 2.158310 CCTTCTCCAAACCCTTCCCTTT 60.158 50.000 0.00 0.00 0.00 3.11
5450 6779 1.429299 CCTTCTCCAAACCCTTCCCTT 59.571 52.381 0.00 0.00 0.00 3.95
5451 6780 1.076438 CCTTCTCCAAACCCTTCCCT 58.924 55.000 0.00 0.00 0.00 4.20
5452 6781 0.612174 GCCTTCTCCAAACCCTTCCC 60.612 60.000 0.00 0.00 0.00 3.97
5453 6782 0.112412 TGCCTTCTCCAAACCCTTCC 59.888 55.000 0.00 0.00 0.00 3.46
5454 6783 1.995376 TTGCCTTCTCCAAACCCTTC 58.005 50.000 0.00 0.00 0.00 3.46
5455 6784 2.039418 GTTTGCCTTCTCCAAACCCTT 58.961 47.619 5.87 0.00 43.74 3.95
5456 6785 1.704641 GTTTGCCTTCTCCAAACCCT 58.295 50.000 5.87 0.00 43.74 4.34
5460 6789 3.450457 ACATTGTGTTTGCCTTCTCCAAA 59.550 39.130 0.00 0.00 0.00 3.28
5461 6790 3.030291 ACATTGTGTTTGCCTTCTCCAA 58.970 40.909 0.00 0.00 0.00 3.53
5462 6791 2.665165 ACATTGTGTTTGCCTTCTCCA 58.335 42.857 0.00 0.00 0.00 3.86
5463 6792 4.072131 TCTACATTGTGTTTGCCTTCTCC 58.928 43.478 0.00 0.00 0.00 3.71
5464 6793 4.515191 TGTCTACATTGTGTTTGCCTTCTC 59.485 41.667 0.00 0.00 0.00 2.87
5465 6794 4.275936 GTGTCTACATTGTGTTTGCCTTCT 59.724 41.667 0.00 0.00 0.00 2.85
5466 6795 4.537015 GTGTCTACATTGTGTTTGCCTTC 58.463 43.478 0.00 0.00 0.00 3.46
5467 6796 3.003275 CGTGTCTACATTGTGTTTGCCTT 59.997 43.478 0.00 0.00 0.00 4.35
5468 6797 2.548057 CGTGTCTACATTGTGTTTGCCT 59.452 45.455 0.00 0.00 0.00 4.75
5469 6798 2.350388 CCGTGTCTACATTGTGTTTGCC 60.350 50.000 0.00 0.00 0.00 4.52
5470 6799 2.546368 TCCGTGTCTACATTGTGTTTGC 59.454 45.455 0.00 0.00 0.00 3.68
5471 6800 4.055360 TCTCCGTGTCTACATTGTGTTTG 58.945 43.478 0.00 0.00 0.00 2.93
5472 6801 4.330944 TCTCCGTGTCTACATTGTGTTT 57.669 40.909 0.00 0.00 0.00 2.83
5473 6802 4.537135 ATCTCCGTGTCTACATTGTGTT 57.463 40.909 0.00 0.00 0.00 3.32
5474 6803 4.537135 AATCTCCGTGTCTACATTGTGT 57.463 40.909 0.00 0.00 0.00 3.72
5475 6804 5.862924 AAAATCTCCGTGTCTACATTGTG 57.137 39.130 0.00 0.00 0.00 3.33
5476 6805 5.181245 CCAAAAATCTCCGTGTCTACATTGT 59.819 40.000 0.00 0.00 0.00 2.71
5477 6806 5.631026 CCAAAAATCTCCGTGTCTACATTG 58.369 41.667 0.00 0.00 0.00 2.82
5478 6807 4.156008 GCCAAAAATCTCCGTGTCTACATT 59.844 41.667 0.00 0.00 0.00 2.71
5479 6808 3.689649 GCCAAAAATCTCCGTGTCTACAT 59.310 43.478 0.00 0.00 0.00 2.29
5480 6809 3.071479 GCCAAAAATCTCCGTGTCTACA 58.929 45.455 0.00 0.00 0.00 2.74
5481 6810 2.093783 CGCCAAAAATCTCCGTGTCTAC 59.906 50.000 0.00 0.00 0.00 2.59
5482 6811 2.289195 ACGCCAAAAATCTCCGTGTCTA 60.289 45.455 0.00 0.00 0.00 2.59
5483 6812 1.156736 CGCCAAAAATCTCCGTGTCT 58.843 50.000 0.00 0.00 0.00 3.41
5484 6813 0.872388 ACGCCAAAAATCTCCGTGTC 59.128 50.000 0.00 0.00 0.00 3.67
5485 6814 0.591170 CACGCCAAAAATCTCCGTGT 59.409 50.000 0.00 0.00 42.86 4.49
5486 6815 0.109781 CCACGCCAAAAATCTCCGTG 60.110 55.000 4.67 4.67 46.15 4.94
5487 6816 0.536460 ACCACGCCAAAAATCTCCGT 60.536 50.000 0.00 0.00 0.00 4.69
5488 6817 0.596082 AACCACGCCAAAAATCTCCG 59.404 50.000 0.00 0.00 0.00 4.63
5489 6818 1.886542 AGAACCACGCCAAAAATCTCC 59.113 47.619 0.00 0.00 0.00 3.71
5490 6819 2.552315 TCAGAACCACGCCAAAAATCTC 59.448 45.455 0.00 0.00 0.00 2.75
5491 6820 2.582052 TCAGAACCACGCCAAAAATCT 58.418 42.857 0.00 0.00 0.00 2.40
5492 6821 3.575965 ATCAGAACCACGCCAAAAATC 57.424 42.857 0.00 0.00 0.00 2.17
5493 6822 3.443681 CCTATCAGAACCACGCCAAAAAT 59.556 43.478 0.00 0.00 0.00 1.82
5494 6823 2.817258 CCTATCAGAACCACGCCAAAAA 59.183 45.455 0.00 0.00 0.00 1.94
5495 6824 2.224670 ACCTATCAGAACCACGCCAAAA 60.225 45.455 0.00 0.00 0.00 2.44
5496 6825 1.349688 ACCTATCAGAACCACGCCAAA 59.650 47.619 0.00 0.00 0.00 3.28
5497 6826 0.981183 ACCTATCAGAACCACGCCAA 59.019 50.000 0.00 0.00 0.00 4.52
5498 6827 0.249120 CACCTATCAGAACCACGCCA 59.751 55.000 0.00 0.00 0.00 5.69
5499 6828 0.462047 CCACCTATCAGAACCACGCC 60.462 60.000 0.00 0.00 0.00 5.68
5500 6829 0.249398 ACCACCTATCAGAACCACGC 59.751 55.000 0.00 0.00 0.00 5.34
5501 6830 2.007049 GCACCACCTATCAGAACCACG 61.007 57.143 0.00 0.00 0.00 4.94
5502 6831 1.279271 AGCACCACCTATCAGAACCAC 59.721 52.381 0.00 0.00 0.00 4.16
5503 6832 1.656587 AGCACCACCTATCAGAACCA 58.343 50.000 0.00 0.00 0.00 3.67
5504 6833 3.553096 CGATAGCACCACCTATCAGAACC 60.553 52.174 9.17 0.00 42.36 3.62
5505 6834 3.068307 ACGATAGCACCACCTATCAGAAC 59.932 47.826 9.17 0.00 42.36 3.01
5506 6835 3.296854 ACGATAGCACCACCTATCAGAA 58.703 45.455 9.17 0.00 42.36 3.02
5507 6836 2.945456 ACGATAGCACCACCTATCAGA 58.055 47.619 9.17 0.00 42.36 3.27
5508 6837 3.365064 CGTACGATAGCACCACCTATCAG 60.365 52.174 10.44 5.32 42.36 2.90
5509 6838 2.551032 CGTACGATAGCACCACCTATCA 59.449 50.000 10.44 0.00 42.36 2.15
5510 6839 2.551459 ACGTACGATAGCACCACCTATC 59.449 50.000 24.41 0.00 40.05 2.08
5511 6840 2.551459 GACGTACGATAGCACCACCTAT 59.449 50.000 24.41 0.00 42.67 2.57
5512 6841 1.942657 GACGTACGATAGCACCACCTA 59.057 52.381 24.41 0.00 42.67 3.08
5513 6842 0.737219 GACGTACGATAGCACCACCT 59.263 55.000 24.41 0.00 42.67 4.00
5514 6843 0.248784 GGACGTACGATAGCACCACC 60.249 60.000 24.41 6.83 42.67 4.61
5515 6844 0.452987 TGGACGTACGATAGCACCAC 59.547 55.000 24.41 1.56 42.67 4.16
5516 6845 0.452987 GTGGACGTACGATAGCACCA 59.547 55.000 24.41 16.42 42.67 4.17
5517 6846 0.590732 CGTGGACGTACGATAGCACC 60.591 60.000 24.41 14.22 46.46 5.01
5518 6847 2.850831 CGTGGACGTACGATAGCAC 58.149 57.895 24.41 5.55 46.46 4.40
5529 6858 0.243907 AGTCTCCATCAACGTGGACG 59.756 55.000 0.00 0.00 43.20 4.79
5530 6859 2.288825 TGAAGTCTCCATCAACGTGGAC 60.289 50.000 0.00 0.00 43.20 4.02
5531 6860 1.967779 TGAAGTCTCCATCAACGTGGA 59.032 47.619 0.00 0.00 45.78 4.02
5532 6861 2.455674 TGAAGTCTCCATCAACGTGG 57.544 50.000 0.00 0.00 40.76 4.94
5533 6862 3.795561 GTTGAAGTCTCCATCAACGTG 57.204 47.619 3.24 0.00 44.01 4.49
5537 6866 3.830178 TCGTAGGTTGAAGTCTCCATCAA 59.170 43.478 0.00 0.00 33.37 2.57
5538 6867 3.427573 TCGTAGGTTGAAGTCTCCATCA 58.572 45.455 0.00 0.00 0.00 3.07
5539 6868 4.425520 CTTCGTAGGTTGAAGTCTCCATC 58.574 47.826 0.00 0.00 38.39 3.51
5540 6869 3.195825 CCTTCGTAGGTTGAAGTCTCCAT 59.804 47.826 0.00 0.00 40.96 3.41
5541 6870 2.561419 CCTTCGTAGGTTGAAGTCTCCA 59.439 50.000 0.00 0.00 40.96 3.86
5542 6871 2.094130 CCCTTCGTAGGTTGAAGTCTCC 60.094 54.545 7.37 0.00 40.96 3.71
5543 6872 2.561858 ACCCTTCGTAGGTTGAAGTCTC 59.438 50.000 7.37 0.00 40.96 3.36
5544 6873 2.606378 ACCCTTCGTAGGTTGAAGTCT 58.394 47.619 7.37 0.00 40.96 3.24
5545 6874 4.240888 GTTACCCTTCGTAGGTTGAAGTC 58.759 47.826 7.37 0.00 40.96 3.01
5546 6875 3.305608 CGTTACCCTTCGTAGGTTGAAGT 60.306 47.826 7.37 0.10 40.96 3.01
5547 6876 3.248266 CGTTACCCTTCGTAGGTTGAAG 58.752 50.000 7.37 0.00 40.19 3.02
5548 6877 2.029110 CCGTTACCCTTCGTAGGTTGAA 60.029 50.000 7.37 0.00 40.19 2.69
5549 6878 1.545582 CCGTTACCCTTCGTAGGTTGA 59.454 52.381 7.37 0.00 40.19 3.18
5550 6879 1.273327 ACCGTTACCCTTCGTAGGTTG 59.727 52.381 7.37 0.00 40.19 3.77
5551 6880 1.632589 ACCGTTACCCTTCGTAGGTT 58.367 50.000 7.37 0.00 40.19 3.50
5552 6881 1.273327 CAACCGTTACCCTTCGTAGGT 59.727 52.381 7.37 3.32 40.19 3.08
5553 6882 1.273327 ACAACCGTTACCCTTCGTAGG 59.727 52.381 0.14 0.14 41.60 3.18
5554 6883 2.331194 CACAACCGTTACCCTTCGTAG 58.669 52.381 0.00 0.00 0.00 3.51
5555 6884 1.605202 GCACAACCGTTACCCTTCGTA 60.605 52.381 0.00 0.00 0.00 3.43
5556 6885 0.881600 GCACAACCGTTACCCTTCGT 60.882 55.000 0.00 0.00 0.00 3.85
5557 6886 1.864176 GCACAACCGTTACCCTTCG 59.136 57.895 0.00 0.00 0.00 3.79
5558 6887 0.600782 TCGCACAACCGTTACCCTTC 60.601 55.000 0.00 0.00 0.00 3.46
5559 6888 0.601841 CTCGCACAACCGTTACCCTT 60.602 55.000 0.00 0.00 0.00 3.95
5560 6889 1.005394 CTCGCACAACCGTTACCCT 60.005 57.895 0.00 0.00 0.00 4.34
5561 6890 1.287041 GACTCGCACAACCGTTACCC 61.287 60.000 0.00 0.00 0.00 3.69
5562 6891 0.319297 AGACTCGCACAACCGTTACC 60.319 55.000 0.00 0.00 0.00 2.85
5563 6892 1.981533 GTAGACTCGCACAACCGTTAC 59.018 52.381 0.00 0.00 0.00 2.50
5564 6893 1.400113 CGTAGACTCGCACAACCGTTA 60.400 52.381 0.00 0.00 0.00 3.18
5565 6894 0.662374 CGTAGACTCGCACAACCGTT 60.662 55.000 0.00 0.00 0.00 4.44
5566 6895 1.081641 CGTAGACTCGCACAACCGT 60.082 57.895 0.00 0.00 0.00 4.83
5567 6896 1.800315 CCGTAGACTCGCACAACCG 60.800 63.158 0.00 0.00 0.00 4.44
5568 6897 0.456312 CTCCGTAGACTCGCACAACC 60.456 60.000 0.00 0.00 0.00 3.77
5569 6898 0.456312 CCTCCGTAGACTCGCACAAC 60.456 60.000 0.00 0.00 0.00 3.32
5570 6899 1.592400 CCCTCCGTAGACTCGCACAA 61.592 60.000 0.00 0.00 0.00 3.33
5571 6900 2.044555 CCCTCCGTAGACTCGCACA 61.045 63.158 0.00 0.00 0.00 4.57
5572 6901 2.799371 CCCTCCGTAGACTCGCAC 59.201 66.667 0.00 0.00 0.00 5.34
5573 6902 3.138798 GCCCTCCGTAGACTCGCA 61.139 66.667 0.00 0.00 0.00 5.10
5574 6903 2.829458 AGCCCTCCGTAGACTCGC 60.829 66.667 0.00 0.00 0.00 5.03
5575 6904 2.188161 GGAGCCCTCCGTAGACTCG 61.188 68.421 0.00 0.00 40.36 4.18
5576 6905 3.844741 GGAGCCCTCCGTAGACTC 58.155 66.667 0.00 0.00 40.36 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.