Multiple sequence alignment - TraesCS3D01G252900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G252900 chr3D 100.000 7006 0 0 1 7006 354268091 354275096 0.000000e+00 12938.0
1 TraesCS3D01G252900 chr3D 96.402 528 19 0 1 528 33314083 33314610 0.000000e+00 870.0
2 TraesCS3D01G252900 chr3A 96.587 3838 78 14 2484 6298 472902014 472905821 0.000000e+00 6312.0
3 TraesCS3D01G252900 chr3A 89.341 1867 78 36 640 2487 472899988 472901752 0.000000e+00 2233.0
4 TraesCS3D01G252900 chr3A 95.992 524 21 0 1 524 552326379 552326902 0.000000e+00 852.0
5 TraesCS3D01G252900 chr3A 87.445 685 41 14 6337 7006 472905822 472906476 0.000000e+00 747.0
6 TraesCS3D01G252900 chr3B 88.495 2425 130 60 530 2874 454871061 454873416 0.000000e+00 2795.0
7 TraesCS3D01G252900 chr3B 93.733 1484 62 17 4837 6298 454874796 454876270 0.000000e+00 2196.0
8 TraesCS3D01G252900 chr3B 88.725 1357 107 24 3029 4355 454873412 454874752 0.000000e+00 1616.0
9 TraesCS3D01G252900 chr3B 96.023 528 21 0 1 528 40285999 40285472 0.000000e+00 859.0
10 TraesCS3D01G252900 chr3B 89.583 672 41 15 6337 7006 454876271 454876915 0.000000e+00 826.0
11 TraesCS3D01G252900 chr3B 87.470 423 38 10 4356 4769 55108567 55108151 2.290000e-129 473.0
12 TraesCS3D01G252900 chr3B 86.957 69 9 0 3247 3315 40851603 40851535 2.100000e-10 78.7
13 TraesCS3D01G252900 chr7D 97.148 526 15 0 1 526 219904349 219904874 0.000000e+00 889.0
14 TraesCS3D01G252900 chr7D 96.226 530 19 1 1 529 174806038 174805509 0.000000e+00 867.0
15 TraesCS3D01G252900 chr7D 87.468 391 43 4 4385 4772 621657916 621658303 4.990000e-121 446.0
16 TraesCS3D01G252900 chr2A 95.992 524 20 1 1 524 377044483 377043961 0.000000e+00 850.0
17 TraesCS3D01G252900 chr2A 89.737 419 32 4 4356 4766 757931587 757932002 6.230000e-145 525.0
18 TraesCS3D01G252900 chr2A 87.156 109 13 1 3240 3347 35581680 35581572 9.540000e-24 122.0
19 TraesCS3D01G252900 chr2A 100.000 29 0 0 3375 3403 689639385 689639413 4.000000e-03 54.7
20 TraesCS3D01G252900 chr7B 95.652 529 22 1 1 529 726809602 726809075 0.000000e+00 848.0
21 TraesCS3D01G252900 chr7B 87.500 424 43 5 4354 4769 611494283 611493862 1.370000e-131 481.0
22 TraesCS3D01G252900 chr5A 95.310 533 25 0 1 533 5655405 5654873 0.000000e+00 846.0
23 TraesCS3D01G252900 chr5A 95.619 525 23 0 1 525 379117512 379116988 0.000000e+00 843.0
24 TraesCS3D01G252900 chr5A 87.248 149 9 4 4628 4769 565381007 565380862 2.020000e-35 161.0
25 TraesCS3D01G252900 chr1D 88.416 423 38 7 4356 4769 356281820 356282240 3.770000e-137 499.0
26 TraesCS3D01G252900 chr1D 89.446 379 33 7 4356 4729 460919524 460919148 8.230000e-129 472.0
27 TraesCS3D01G252900 chr1D 83.077 65 7 4 3373 3436 118806412 118806351 1.000000e-03 56.5
28 TraesCS3D01G252900 chr6A 87.864 412 44 6 4356 4766 549433604 549434010 4.920000e-131 479.0
29 TraesCS3D01G252900 chr6A 83.333 414 58 10 4354 4766 489361282 489361685 8.580000e-99 372.0
30 TraesCS3D01G252900 chr6A 90.566 53 5 0 3375 3427 604847942 604847994 3.510000e-08 71.3
31 TraesCS3D01G252900 chr6B 86.874 419 52 3 4356 4774 18392677 18392262 3.830000e-127 466.0
32 TraesCS3D01G252900 chr6B 93.478 46 2 1 3238 3283 676680095 676680139 4.540000e-07 67.6
33 TraesCS3D01G252900 chr6B 94.444 36 1 1 4320 4355 643169954 643169988 4.000000e-03 54.7
34 TraesCS3D01G252900 chr1A 89.005 191 13 2 4587 4770 562031407 562031596 5.470000e-56 230.0
35 TraesCS3D01G252900 chr4D 79.032 186 29 9 3174 3352 496936957 496937139 1.230000e-22 119.0
36 TraesCS3D01G252900 chr5B 86.735 98 13 0 1555 1652 680768961 680769058 7.430000e-20 110.0
37 TraesCS3D01G252900 chr1B 72.559 379 81 18 3054 3415 605023787 605023415 1.240000e-17 102.0
38 TraesCS3D01G252900 chr7A 77.660 188 27 13 3173 3349 712084702 712084519 4.470000e-17 100.0
39 TraesCS3D01G252900 chr7A 82.143 84 15 0 3872 3955 666977759 666977842 9.750000e-09 73.1
40 TraesCS3D01G252900 chr4B 75.532 188 35 9 2749 2934 115535583 115535761 1.620000e-11 82.4
41 TraesCS3D01G252900 chr6D 77.344 128 25 3 3871 3996 409164139 409164264 9.750000e-09 73.1
42 TraesCS3D01G252900 chr2D 78.226 124 16 7 3330 3444 546928002 546927881 1.260000e-07 69.4
43 TraesCS3D01G252900 chr5D 82.609 69 11 1 3245 3312 406173917 406173849 7.590000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G252900 chr3D 354268091 354275096 7005 False 12938.000000 12938 100.000000 1 7006 1 chr3D.!!$F2 7005
1 TraesCS3D01G252900 chr3D 33314083 33314610 527 False 870.000000 870 96.402000 1 528 1 chr3D.!!$F1 527
2 TraesCS3D01G252900 chr3A 472899988 472906476 6488 False 3097.333333 6312 91.124333 640 7006 3 chr3A.!!$F2 6366
3 TraesCS3D01G252900 chr3A 552326379 552326902 523 False 852.000000 852 95.992000 1 524 1 chr3A.!!$F1 523
4 TraesCS3D01G252900 chr3B 454871061 454876915 5854 False 1858.250000 2795 90.134000 530 7006 4 chr3B.!!$F1 6476
5 TraesCS3D01G252900 chr3B 40285472 40285999 527 True 859.000000 859 96.023000 1 528 1 chr3B.!!$R1 527
6 TraesCS3D01G252900 chr7D 219904349 219904874 525 False 889.000000 889 97.148000 1 526 1 chr7D.!!$F1 525
7 TraesCS3D01G252900 chr7D 174805509 174806038 529 True 867.000000 867 96.226000 1 529 1 chr7D.!!$R1 528
8 TraesCS3D01G252900 chr2A 377043961 377044483 522 True 850.000000 850 95.992000 1 524 1 chr2A.!!$R2 523
9 TraesCS3D01G252900 chr7B 726809075 726809602 527 True 848.000000 848 95.652000 1 529 1 chr7B.!!$R2 528
10 TraesCS3D01G252900 chr5A 5654873 5655405 532 True 846.000000 846 95.310000 1 533 1 chr5A.!!$R1 532
11 TraesCS3D01G252900 chr5A 379116988 379117512 524 True 843.000000 843 95.619000 1 525 1 chr5A.!!$R2 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
651 653 0.026803 GCGAACGATGTCATCAAGCC 59.973 55.0 13.22 0.0 0.00 4.35 F
1495 1540 0.032130 AACAAGAGTTCGCGCTCAGA 59.968 50.0 14.82 0.0 37.94 3.27 F
2722 3072 0.039256 TTGGCTTTTCTGCGACATGC 60.039 50.0 0.00 0.0 46.70 4.06 F
4363 5160 0.748450 ACTTGTTGGACGAGAACGGA 59.252 50.0 2.45 0.0 44.46 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2373 2432 0.322997 CTCCTCGACCCACAGACTCT 60.323 60.000 0.00 0.0 0.00 3.24 R
2882 3245 1.606601 CCAGACCAGGTCCTGTCGA 60.607 63.158 16.72 0.0 32.18 4.20 R
4366 5163 0.250234 CATGGAGACCGAGAGCCAAA 59.750 55.000 0.00 0.0 33.51 3.28 R
6315 7135 0.105964 CCGTTCCGGGCATCTAATCA 59.894 55.000 0.00 0.0 44.15 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 1.936547 GATCAATGTGGACGCCTCTTC 59.063 52.381 0.00 0.00 0.00 2.87
175 176 4.641989 ACAGTGTTGTTTCAGCAGAGATTT 59.358 37.500 0.00 0.00 32.28 2.17
286 288 6.989759 AGCGGTGGAAAAATTTGAAAGTTATT 59.010 30.769 0.00 0.00 0.00 1.40
288 290 8.766151 GCGGTGGAAAAATTTGAAAGTTATTTA 58.234 29.630 0.00 0.00 0.00 1.40
644 646 2.355244 TGCGTGCGAACGATGTCA 60.355 55.556 22.89 4.76 34.64 3.58
651 653 0.026803 GCGAACGATGTCATCAAGCC 59.973 55.000 13.22 0.00 0.00 4.35
724 730 1.267806 CCCTCACACATGTGCTGTTTC 59.732 52.381 25.68 0.00 45.25 2.78
725 731 1.069703 CCTCACACATGTGCTGTTTCG 60.070 52.381 25.68 7.23 45.25 3.46
726 732 0.307453 TCACACATGTGCTGTTTCGC 59.693 50.000 25.68 0.00 45.25 4.70
987 1005 4.429212 CGACCGATCGCCACACCA 62.429 66.667 10.32 0.00 42.43 4.17
1395 1418 1.523154 TTTTCGCGCCCATGCTCTTT 61.523 50.000 0.00 0.00 34.43 2.52
1409 1432 3.013921 TGCTCTTTCCACGTTTTCTTGT 58.986 40.909 0.00 0.00 0.00 3.16
1410 1433 3.442273 TGCTCTTTCCACGTTTTCTTGTT 59.558 39.130 0.00 0.00 0.00 2.83
1415 1438 3.553828 TCCACGTTTTCTTGTTCCTCT 57.446 42.857 0.00 0.00 0.00 3.69
1427 1450 1.336887 TGTTCCTCTACGTGCTTCTGC 60.337 52.381 0.00 0.00 40.20 4.26
1439 1476 3.815856 TGCTTCTGCATTCCAAAACAA 57.184 38.095 0.00 0.00 45.31 2.83
1484 1529 0.235665 CGCATCAACGCAACAAGAGT 59.764 50.000 0.00 0.00 0.00 3.24
1485 1530 1.334059 CGCATCAACGCAACAAGAGTT 60.334 47.619 0.00 0.00 41.14 3.01
1486 1531 2.310577 GCATCAACGCAACAAGAGTTC 58.689 47.619 0.00 0.00 38.23 3.01
1487 1532 2.563976 CATCAACGCAACAAGAGTTCG 58.436 47.619 0.00 0.00 38.23 3.95
1488 1533 0.303493 TCAACGCAACAAGAGTTCGC 59.697 50.000 0.00 0.00 38.23 4.70
1490 1535 2.497628 CGCAACAAGAGTTCGCGC 60.498 61.111 0.00 0.00 39.43 6.86
1491 1536 2.939022 GCAACAAGAGTTCGCGCT 59.061 55.556 5.56 0.00 35.28 5.92
1492 1537 1.154580 GCAACAAGAGTTCGCGCTC 60.155 57.895 5.56 2.88 35.28 5.03
1493 1538 1.831389 GCAACAAGAGTTCGCGCTCA 61.831 55.000 14.82 0.00 37.94 4.26
1494 1539 0.162507 CAACAAGAGTTCGCGCTCAG 59.837 55.000 14.82 9.65 37.94 3.35
1495 1540 0.032130 AACAAGAGTTCGCGCTCAGA 59.968 50.000 14.82 0.00 37.94 3.27
1496 1541 0.032130 ACAAGAGTTCGCGCTCAGAA 59.968 50.000 14.82 0.00 37.94 3.02
1497 1542 0.712775 CAAGAGTTCGCGCTCAGAAG 59.287 55.000 14.82 0.00 37.94 2.85
1507 1552 1.451028 GCTCAGAAGCGGCATTCCT 60.451 57.895 1.45 0.00 39.10 3.36
1695 1740 2.041405 CTGTCCCTCCCTCCTCCC 60.041 72.222 0.00 0.00 0.00 4.30
1699 1747 4.806339 CCCTCCCTCCTCCCGCTT 62.806 72.222 0.00 0.00 0.00 4.68
1722 1770 4.515191 TCTTGACTACCATGAACAAACTGC 59.485 41.667 0.00 0.00 0.00 4.40
1723 1771 3.814625 TGACTACCATGAACAAACTGCA 58.185 40.909 0.00 0.00 0.00 4.41
1724 1772 3.563808 TGACTACCATGAACAAACTGCAC 59.436 43.478 0.00 0.00 0.00 4.57
1725 1773 3.815401 GACTACCATGAACAAACTGCACT 59.185 43.478 0.00 0.00 0.00 4.40
1726 1774 3.565482 ACTACCATGAACAAACTGCACTG 59.435 43.478 0.00 0.00 0.00 3.66
1727 1775 2.378038 ACCATGAACAAACTGCACTGT 58.622 42.857 0.00 0.00 0.00 3.55
1728 1776 2.099592 ACCATGAACAAACTGCACTGTG 59.900 45.455 2.76 2.76 0.00 3.66
1729 1777 2.121786 CATGAACAAACTGCACTGTGC 58.878 47.619 25.15 25.15 45.29 4.57
1751 1799 1.540146 CGTGTCACCAACTCACCATGA 60.540 52.381 0.00 0.00 0.00 3.07
1791 1839 0.541296 AGCTGCCAACTGCCTGATTT 60.541 50.000 0.00 0.00 41.37 2.17
1850 1898 0.744414 ACAGATTTCGCACGATGGGG 60.744 55.000 0.00 0.00 0.00 4.96
1851 1899 1.153168 AGATTTCGCACGATGGGGG 60.153 57.895 0.00 0.00 0.00 5.40
1852 1900 2.828549 ATTTCGCACGATGGGGGC 60.829 61.111 0.00 0.00 0.00 5.80
1912 1960 2.432206 GCGGTAGCACCATTTGTTTT 57.568 45.000 6.21 0.00 44.35 2.43
1984 2032 1.427592 GCTGAGGCAAGATCACTCGC 61.428 60.000 0.00 2.49 38.54 5.03
1985 2033 0.175302 CTGAGGCAAGATCACTCGCT 59.825 55.000 0.00 0.00 34.03 4.93
1986 2034 0.174389 TGAGGCAAGATCACTCGCTC 59.826 55.000 0.00 0.00 34.03 5.03
1987 2035 0.459489 GAGGCAAGATCACTCGCTCT 59.541 55.000 0.00 0.00 0.00 4.09
1988 2036 0.459489 AGGCAAGATCACTCGCTCTC 59.541 55.000 0.00 0.00 0.00 3.20
1989 2037 0.174389 GGCAAGATCACTCGCTCTCA 59.826 55.000 0.00 0.00 0.00 3.27
2098 2146 9.512588 AGAAACAAAAGATGATCTAGTGTCAAT 57.487 29.630 10.31 2.74 30.57 2.57
2112 2160 5.886960 AGTGTCAATATCTGCTTTTGTCC 57.113 39.130 0.00 0.00 0.00 4.02
2113 2161 5.564550 AGTGTCAATATCTGCTTTTGTCCT 58.435 37.500 0.00 0.00 0.00 3.85
2128 2176 0.386226 GTCCTATCGAGCAGCGCTAC 60.386 60.000 10.99 3.74 39.88 3.58
2142 2195 1.702299 GCTACTTGTACTGTGCGCG 59.298 57.895 0.00 0.00 0.00 6.86
2168 2223 2.358957 GCCTTTTGAATTCCCAATGGC 58.641 47.619 20.00 20.00 38.15 4.40
2176 2231 2.250921 ATTCCCAATGGCAATGGACA 57.749 45.000 23.14 9.02 40.56 4.02
2190 2245 5.827797 GGCAATGGACAGGATGATTTAGTAA 59.172 40.000 0.00 0.00 39.69 2.24
2191 2246 6.491403 GGCAATGGACAGGATGATTTAGTAAT 59.509 38.462 0.00 0.00 39.69 1.89
2279 2338 1.004918 AGCACACTTGGTAGACCGC 60.005 57.895 0.00 0.00 39.43 5.68
2295 2354 0.734889 CCGCCAGGTAGCATTTTCAG 59.265 55.000 0.00 0.00 0.00 3.02
2373 2432 1.144969 GTTTGTCAATGGCGTCGAGA 58.855 50.000 0.00 0.00 0.00 4.04
2439 2512 3.423154 CGGCTTCGGGCAGTGTTC 61.423 66.667 0.00 0.00 44.01 3.18
2552 2890 3.368948 CCAGAGGTTTTGTCTCTCCTAGC 60.369 52.174 0.00 0.00 39.36 3.42
2553 2891 3.259374 CAGAGGTTTTGTCTCTCCTAGCA 59.741 47.826 0.00 0.00 39.36 3.49
2554 2892 3.513515 AGAGGTTTTGTCTCTCCTAGCAG 59.486 47.826 0.00 0.00 36.99 4.24
2555 2893 3.243724 AGGTTTTGTCTCTCCTAGCAGT 58.756 45.455 0.00 0.00 0.00 4.40
2556 2894 3.007398 AGGTTTTGTCTCTCCTAGCAGTG 59.993 47.826 0.00 0.00 0.00 3.66
2557 2895 3.006967 GGTTTTGTCTCTCCTAGCAGTGA 59.993 47.826 0.00 0.00 0.00 3.41
2559 2897 4.955811 TTTGTCTCTCCTAGCAGTGAAA 57.044 40.909 0.00 0.00 0.00 2.69
2560 2898 3.944055 TGTCTCTCCTAGCAGTGAAAC 57.056 47.619 0.00 0.00 0.00 2.78
2561 2899 3.230976 TGTCTCTCCTAGCAGTGAAACA 58.769 45.455 0.00 0.00 41.43 2.83
2562 2900 3.256879 TGTCTCTCCTAGCAGTGAAACAG 59.743 47.826 0.00 0.00 41.43 3.16
2563 2901 3.508012 GTCTCTCCTAGCAGTGAAACAGA 59.492 47.826 0.00 0.00 41.43 3.41
2571 2921 2.954318 AGCAGTGAAACAGAGTTGCATT 59.046 40.909 0.00 0.00 41.43 3.56
2679 3029 2.065799 ACCCACTTGATCCTTTCCACT 58.934 47.619 0.00 0.00 0.00 4.00
2722 3072 0.039256 TTGGCTTTTCTGCGACATGC 60.039 50.000 0.00 0.00 46.70 4.06
2723 3073 1.153958 GGCTTTTCTGCGACATGCC 60.154 57.895 0.00 6.09 45.60 4.40
2724 3074 1.153958 GCTTTTCTGCGACATGCCC 60.154 57.895 0.00 0.00 45.60 5.36
2743 3096 4.080582 TGCCCCGATAACTGATATTATGGG 60.081 45.833 0.00 0.00 39.12 4.00
2746 3099 6.717289 CCCCGATAACTGATATTATGGGAAA 58.283 40.000 7.82 0.00 40.87 3.13
2882 3245 5.085920 TCATGATGGGTTGGACTGAATTTT 58.914 37.500 0.00 0.00 0.00 1.82
2959 3322 4.660352 TCTGTTGCTTGTTTTTGTTTGC 57.340 36.364 0.00 0.00 0.00 3.68
3289 3673 7.076842 ACAATATGTGTGTGAATTCTACTGC 57.923 36.000 7.05 4.83 39.72 4.40
3302 3686 7.324616 GTGAATTCTACTGCAGTGTGAAAATTC 59.675 37.037 29.57 27.53 0.00 2.17
4318 4711 8.712285 TCAAAATCGACTAATTATTCGGTCTT 57.288 30.769 20.83 8.04 35.89 3.01
4362 5159 0.859232 CACTTGTTGGACGAGAACGG 59.141 55.000 2.45 0.00 44.46 4.44
4363 5160 0.748450 ACTTGTTGGACGAGAACGGA 59.252 50.000 2.45 0.00 44.46 4.69
4364 5161 1.137513 CTTGTTGGACGAGAACGGAC 58.862 55.000 0.00 0.00 44.46 4.79
4365 5162 0.595567 TTGTTGGACGAGAACGGACG 60.596 55.000 0.00 0.00 44.46 4.79
4366 5163 1.008079 GTTGGACGAGAACGGACGT 60.008 57.895 0.00 0.00 45.32 4.34
4367 5164 0.595825 GTTGGACGAGAACGGACGTT 60.596 55.000 10.13 10.13 42.74 3.99
4368 5165 0.102844 TTGGACGAGAACGGACGTTT 59.897 50.000 11.67 2.17 42.74 3.60
4369 5166 0.595567 TGGACGAGAACGGACGTTTG 60.596 55.000 11.67 7.55 42.74 2.93
4370 5167 1.280206 GGACGAGAACGGACGTTTGG 61.280 60.000 11.67 6.72 42.74 3.28
4371 5168 1.883725 GACGAGAACGGACGTTTGGC 61.884 60.000 11.67 3.80 42.74 4.52
4372 5169 1.663702 CGAGAACGGACGTTTGGCT 60.664 57.895 11.67 4.38 38.60 4.75
4373 5170 1.615107 CGAGAACGGACGTTTGGCTC 61.615 60.000 11.67 11.96 38.60 4.70
4374 5171 0.319641 GAGAACGGACGTTTGGCTCT 60.320 55.000 11.67 3.69 38.60 4.09
4375 5172 0.319641 AGAACGGACGTTTGGCTCTC 60.320 55.000 11.67 0.00 38.60 3.20
4376 5173 1.615107 GAACGGACGTTTGGCTCTCG 61.615 60.000 11.67 0.00 38.60 4.04
4377 5174 2.809601 CGGACGTTTGGCTCTCGG 60.810 66.667 0.00 0.00 0.00 4.63
4378 5175 2.342648 GGACGTTTGGCTCTCGGT 59.657 61.111 0.00 0.00 0.00 4.69
4379 5176 1.737008 GGACGTTTGGCTCTCGGTC 60.737 63.158 0.00 0.00 0.00 4.79
4380 5177 1.289380 GACGTTTGGCTCTCGGTCT 59.711 57.895 0.00 0.00 0.00 3.85
4381 5178 0.733223 GACGTTTGGCTCTCGGTCTC 60.733 60.000 0.00 0.00 0.00 3.36
4382 5179 1.446272 CGTTTGGCTCTCGGTCTCC 60.446 63.158 0.00 0.00 0.00 3.71
4383 5180 1.671742 GTTTGGCTCTCGGTCTCCA 59.328 57.895 0.00 0.00 0.00 3.86
4384 5181 0.250513 GTTTGGCTCTCGGTCTCCAT 59.749 55.000 0.00 0.00 0.00 3.41
4385 5182 0.250234 TTTGGCTCTCGGTCTCCATG 59.750 55.000 0.00 0.00 0.00 3.66
4386 5183 1.617018 TTGGCTCTCGGTCTCCATGG 61.617 60.000 4.97 4.97 0.00 3.66
4387 5184 1.758514 GGCTCTCGGTCTCCATGGA 60.759 63.158 15.27 15.27 0.00 3.41
4388 5185 1.739049 GCTCTCGGTCTCCATGGAG 59.261 63.158 32.60 32.60 43.21 3.86
4389 5186 1.743321 GCTCTCGGTCTCCATGGAGG 61.743 65.000 35.95 22.78 42.20 4.30
4390 5187 1.743321 CTCTCGGTCTCCATGGAGGC 61.743 65.000 35.95 35.11 45.35 4.70
4395 5192 3.911719 GTCTCCATGGAGGCCATTT 57.088 52.632 35.95 0.00 42.23 2.32
4396 5193 2.149973 GTCTCCATGGAGGCCATTTT 57.850 50.000 35.95 0.00 42.23 1.82
4397 5194 2.460669 GTCTCCATGGAGGCCATTTTT 58.539 47.619 35.95 0.00 42.23 1.94
4459 5256 8.496707 AAAAATCTGAAAAGAATTGTGCAAGT 57.503 26.923 0.00 0.00 0.00 3.16
4460 5257 9.598517 AAAAATCTGAAAAGAATTGTGCAAGTA 57.401 25.926 0.00 0.00 0.00 2.24
4461 5258 9.598517 AAAATCTGAAAAGAATTGTGCAAGTAA 57.401 25.926 0.00 0.00 0.00 2.24
4462 5259 9.598517 AAATCTGAAAAGAATTGTGCAAGTAAA 57.401 25.926 0.00 0.00 0.00 2.01
4463 5260 7.985634 TCTGAAAAGAATTGTGCAAGTAAAC 57.014 32.000 0.00 0.00 0.00 2.01
4464 5261 7.542890 TCTGAAAAGAATTGTGCAAGTAAACA 58.457 30.769 0.00 0.00 0.00 2.83
4465 5262 8.031864 TCTGAAAAGAATTGTGCAAGTAAACAA 58.968 29.630 0.00 0.00 40.36 2.83
4466 5263 8.539770 TGAAAAGAATTGTGCAAGTAAACAAA 57.460 26.923 0.00 0.00 39.57 2.83
4467 5264 9.160496 TGAAAAGAATTGTGCAAGTAAACAAAT 57.840 25.926 0.00 0.00 39.57 2.32
4471 5268 9.762933 AAGAATTGTGCAAGTAAACAAATATGT 57.237 25.926 0.00 0.00 43.14 2.29
4498 5295 7.809546 TGTGTATGTGTGTAAAAATTCAGGA 57.190 32.000 0.00 0.00 0.00 3.86
4499 5296 8.402798 TGTGTATGTGTGTAAAAATTCAGGAT 57.597 30.769 0.00 0.00 0.00 3.24
4500 5297 8.296000 TGTGTATGTGTGTAAAAATTCAGGATG 58.704 33.333 0.00 0.00 37.54 3.51
4516 5313 5.879237 TCAGGATGAAATACGTTGAAATGC 58.121 37.500 0.00 0.00 45.97 3.56
4517 5314 4.730042 CAGGATGAAATACGTTGAAATGCG 59.270 41.667 0.00 0.00 39.69 4.73
4518 5315 4.634004 AGGATGAAATACGTTGAAATGCGA 59.366 37.500 0.00 0.00 26.49 5.10
4519 5316 4.728608 GGATGAAATACGTTGAAATGCGAC 59.271 41.667 0.00 0.00 0.00 5.19
4520 5317 4.073169 TGAAATACGTTGAAATGCGACC 57.927 40.909 0.00 0.00 0.00 4.79
4521 5318 3.749088 TGAAATACGTTGAAATGCGACCT 59.251 39.130 0.00 0.00 0.00 3.85
4522 5319 3.740044 AATACGTTGAAATGCGACCTG 57.260 42.857 0.00 0.00 0.00 4.00
4523 5320 2.157834 TACGTTGAAATGCGACCTGT 57.842 45.000 0.00 0.00 0.00 4.00
4524 5321 2.157834 ACGTTGAAATGCGACCTGTA 57.842 45.000 0.00 0.00 0.00 2.74
4525 5322 1.796459 ACGTTGAAATGCGACCTGTAC 59.204 47.619 0.00 0.00 0.00 2.90
4526 5323 1.795872 CGTTGAAATGCGACCTGTACA 59.204 47.619 0.00 0.00 0.00 2.90
4527 5324 2.222213 CGTTGAAATGCGACCTGTACAA 59.778 45.455 0.00 0.00 0.00 2.41
4528 5325 3.303461 CGTTGAAATGCGACCTGTACAAA 60.303 43.478 0.00 0.00 0.00 2.83
4529 5326 4.602995 GTTGAAATGCGACCTGTACAAAA 58.397 39.130 0.00 0.00 0.00 2.44
4530 5327 4.902443 TGAAATGCGACCTGTACAAAAA 57.098 36.364 0.00 0.00 0.00 1.94
4531 5328 4.854399 TGAAATGCGACCTGTACAAAAAG 58.146 39.130 0.00 0.00 0.00 2.27
4532 5329 3.915437 AATGCGACCTGTACAAAAAGG 57.085 42.857 0.00 0.00 39.65 3.11
4533 5330 2.623878 TGCGACCTGTACAAAAAGGA 57.376 45.000 5.91 0.00 37.01 3.36
4534 5331 2.215196 TGCGACCTGTACAAAAAGGAC 58.785 47.619 5.91 0.00 37.01 3.85
4535 5332 2.215196 GCGACCTGTACAAAAAGGACA 58.785 47.619 5.91 0.00 37.01 4.02
4536 5333 2.614983 GCGACCTGTACAAAAAGGACAA 59.385 45.455 5.91 0.00 37.01 3.18
4537 5334 3.065648 GCGACCTGTACAAAAAGGACAAA 59.934 43.478 5.91 0.00 37.01 2.83
4538 5335 4.261447 GCGACCTGTACAAAAAGGACAAAT 60.261 41.667 5.91 0.00 37.01 2.32
4539 5336 5.449304 CGACCTGTACAAAAAGGACAAATC 58.551 41.667 5.91 0.00 37.01 2.17
4540 5337 5.562113 CGACCTGTACAAAAAGGACAAATCC 60.562 44.000 5.91 0.00 46.69 3.01
4551 5348 3.297134 GGACAAATCCATGGGCTAAGA 57.703 47.619 13.02 0.00 45.47 2.10
4552 5349 3.217626 GGACAAATCCATGGGCTAAGAG 58.782 50.000 13.02 0.00 45.47 2.85
4553 5350 3.217626 GACAAATCCATGGGCTAAGAGG 58.782 50.000 13.02 0.00 0.00 3.69
4554 5351 2.852449 ACAAATCCATGGGCTAAGAGGA 59.148 45.455 13.02 0.00 0.00 3.71
4555 5352 3.464833 ACAAATCCATGGGCTAAGAGGAT 59.535 43.478 13.02 0.00 40.66 3.24
4556 5353 3.803186 AATCCATGGGCTAAGAGGATG 57.197 47.619 13.02 0.00 38.98 3.51
4557 5354 2.494888 TCCATGGGCTAAGAGGATGA 57.505 50.000 13.02 0.00 0.00 2.92
4558 5355 2.775418 TCCATGGGCTAAGAGGATGAA 58.225 47.619 13.02 0.00 0.00 2.57
4559 5356 3.330198 TCCATGGGCTAAGAGGATGAAT 58.670 45.455 13.02 0.00 0.00 2.57
4560 5357 4.502415 TCCATGGGCTAAGAGGATGAATA 58.498 43.478 13.02 0.00 0.00 1.75
4561 5358 4.533707 TCCATGGGCTAAGAGGATGAATAG 59.466 45.833 13.02 0.00 0.00 1.73
4562 5359 4.288105 CCATGGGCTAAGAGGATGAATAGT 59.712 45.833 2.85 0.00 0.00 2.12
4563 5360 5.485353 CCATGGGCTAAGAGGATGAATAGTA 59.515 44.000 2.85 0.00 0.00 1.82
4564 5361 6.157645 CCATGGGCTAAGAGGATGAATAGTAT 59.842 42.308 2.85 0.00 0.00 2.12
4565 5362 6.859112 TGGGCTAAGAGGATGAATAGTATC 57.141 41.667 0.00 0.00 0.00 2.24
4566 5363 6.565974 TGGGCTAAGAGGATGAATAGTATCT 58.434 40.000 0.00 0.00 0.00 1.98
4567 5364 7.019388 TGGGCTAAGAGGATGAATAGTATCTT 58.981 38.462 0.00 0.00 0.00 2.40
4568 5365 8.177456 TGGGCTAAGAGGATGAATAGTATCTTA 58.823 37.037 0.00 0.00 0.00 2.10
4569 5366 9.036980 GGGCTAAGAGGATGAATAGTATCTTAA 57.963 37.037 0.00 0.00 31.05 1.85
4583 5380 9.984590 AATAGTATCTTAAGTTAAAAAGCCCCA 57.015 29.630 1.63 0.00 0.00 4.96
4584 5381 7.939784 AGTATCTTAAGTTAAAAAGCCCCAG 57.060 36.000 1.63 0.00 0.00 4.45
4585 5382 7.696017 AGTATCTTAAGTTAAAAAGCCCCAGA 58.304 34.615 1.63 0.00 0.00 3.86
4586 5383 8.336987 AGTATCTTAAGTTAAAAAGCCCCAGAT 58.663 33.333 1.63 0.00 0.00 2.90
4587 5384 8.967918 GTATCTTAAGTTAAAAAGCCCCAGATT 58.032 33.333 1.63 0.00 0.00 2.40
4588 5385 7.849322 TCTTAAGTTAAAAAGCCCCAGATTT 57.151 32.000 1.63 0.00 31.52 2.17
4589 5386 7.666623 TCTTAAGTTAAAAAGCCCCAGATTTG 58.333 34.615 1.63 0.00 30.45 2.32
4590 5387 5.887214 AAGTTAAAAAGCCCCAGATTTGT 57.113 34.783 0.00 0.00 30.45 2.83
4591 5388 5.468540 AGTTAAAAAGCCCCAGATTTGTC 57.531 39.130 0.00 0.00 30.45 3.18
4592 5389 5.147767 AGTTAAAAAGCCCCAGATTTGTCT 58.852 37.500 0.00 0.00 30.45 3.41
4593 5390 5.602561 AGTTAAAAAGCCCCAGATTTGTCTT 59.397 36.000 0.00 0.00 30.45 3.01
4594 5391 6.099701 AGTTAAAAAGCCCCAGATTTGTCTTT 59.900 34.615 0.00 0.00 30.45 2.52
4595 5392 5.372343 AAAAAGCCCCAGATTTGTCTTTT 57.628 34.783 0.00 0.00 35.89 2.27
4596 5393 5.372343 AAAAGCCCCAGATTTGTCTTTTT 57.628 34.783 0.00 0.00 31.97 1.94
4614 5411 4.478206 TTTTTGCACAACCCTCATTTCA 57.522 36.364 0.00 0.00 0.00 2.69
4615 5412 4.478206 TTTTGCACAACCCTCATTTCAA 57.522 36.364 0.00 0.00 0.00 2.69
4616 5413 3.451141 TTGCACAACCCTCATTTCAAC 57.549 42.857 0.00 0.00 0.00 3.18
4617 5414 2.382882 TGCACAACCCTCATTTCAACA 58.617 42.857 0.00 0.00 0.00 3.33
4618 5415 2.100584 TGCACAACCCTCATTTCAACAC 59.899 45.455 0.00 0.00 0.00 3.32
4619 5416 2.100584 GCACAACCCTCATTTCAACACA 59.899 45.455 0.00 0.00 0.00 3.72
4620 5417 3.243839 GCACAACCCTCATTTCAACACAT 60.244 43.478 0.00 0.00 0.00 3.21
4621 5418 4.740334 GCACAACCCTCATTTCAACACATT 60.740 41.667 0.00 0.00 0.00 2.71
4622 5419 5.358922 CACAACCCTCATTTCAACACATTT 58.641 37.500 0.00 0.00 0.00 2.32
4623 5420 5.816777 CACAACCCTCATTTCAACACATTTT 59.183 36.000 0.00 0.00 0.00 1.82
4624 5421 5.816777 ACAACCCTCATTTCAACACATTTTG 59.183 36.000 0.00 0.00 0.00 2.44
4625 5422 4.379652 ACCCTCATTTCAACACATTTTGC 58.620 39.130 0.00 0.00 0.00 3.68
4626 5423 3.747529 CCCTCATTTCAACACATTTTGCC 59.252 43.478 0.00 0.00 0.00 4.52
4627 5424 3.747529 CCTCATTTCAACACATTTTGCCC 59.252 43.478 0.00 0.00 0.00 5.36
4628 5425 4.503643 CCTCATTTCAACACATTTTGCCCT 60.504 41.667 0.00 0.00 0.00 5.19
4629 5426 4.378774 TCATTTCAACACATTTTGCCCTG 58.621 39.130 0.00 0.00 0.00 4.45
4630 5427 4.100653 TCATTTCAACACATTTTGCCCTGA 59.899 37.500 0.00 0.00 0.00 3.86
4631 5428 4.478206 TTTCAACACATTTTGCCCTGAA 57.522 36.364 0.00 0.00 0.00 3.02
4632 5429 4.478206 TTCAACACATTTTGCCCTGAAA 57.522 36.364 0.00 0.00 0.00 2.69
4633 5430 4.478206 TCAACACATTTTGCCCTGAAAA 57.522 36.364 0.00 0.00 0.00 2.29
4634 5431 4.440880 TCAACACATTTTGCCCTGAAAAG 58.559 39.130 0.00 0.00 0.00 2.27
4635 5432 4.081198 TCAACACATTTTGCCCTGAAAAGT 60.081 37.500 0.00 0.00 0.00 2.66
4636 5433 4.486125 ACACATTTTGCCCTGAAAAGTT 57.514 36.364 0.00 0.00 0.00 2.66
4637 5434 5.606348 ACACATTTTGCCCTGAAAAGTTA 57.394 34.783 0.00 0.00 0.00 2.24
4638 5435 6.173427 ACACATTTTGCCCTGAAAAGTTAT 57.827 33.333 0.00 0.00 0.00 1.89
4639 5436 7.296628 ACACATTTTGCCCTGAAAAGTTATA 57.703 32.000 0.00 0.00 0.00 0.98
4640 5437 7.151976 ACACATTTTGCCCTGAAAAGTTATAC 58.848 34.615 0.00 0.00 0.00 1.47
4641 5438 7.151308 CACATTTTGCCCTGAAAAGTTATACA 58.849 34.615 0.00 0.00 0.00 2.29
4642 5439 7.116233 CACATTTTGCCCTGAAAAGTTATACAC 59.884 37.037 0.00 0.00 0.00 2.90
4643 5440 6.716934 TTTTGCCCTGAAAAGTTATACACA 57.283 33.333 0.00 0.00 0.00 3.72
4644 5441 6.909550 TTTGCCCTGAAAAGTTATACACAT 57.090 33.333 0.00 0.00 0.00 3.21
4645 5442 5.895636 TGCCCTGAAAAGTTATACACATG 57.104 39.130 0.00 0.00 0.00 3.21
4646 5443 5.321102 TGCCCTGAAAAGTTATACACATGT 58.679 37.500 0.00 0.00 0.00 3.21
4647 5444 5.182950 TGCCCTGAAAAGTTATACACATGTG 59.817 40.000 24.25 24.25 0.00 3.21
4648 5445 5.183140 GCCCTGAAAAGTTATACACATGTGT 59.817 40.000 32.47 32.47 46.87 3.72
4661 5458 4.707030 CACATGTGTGTTATGCCTTCAT 57.293 40.909 18.03 0.00 40.96 2.57
4662 5459 4.417506 CACATGTGTGTTATGCCTTCATG 58.582 43.478 18.03 0.00 40.96 3.07
4663 5460 4.081406 ACATGTGTGTTATGCCTTCATGT 58.919 39.130 0.00 0.00 39.25 3.21
4664 5461 5.123661 CACATGTGTGTTATGCCTTCATGTA 59.876 40.000 18.03 0.00 41.14 2.29
4665 5462 5.887598 ACATGTGTGTTATGCCTTCATGTAT 59.112 36.000 0.00 0.00 41.23 2.29
4666 5463 7.012232 CACATGTGTGTTATGCCTTCATGTATA 59.988 37.037 18.03 0.00 41.14 1.47
4667 5464 7.720957 ACATGTGTGTTATGCCTTCATGTATAT 59.279 33.333 0.00 0.00 41.23 0.86
4668 5465 7.728847 TGTGTGTTATGCCTTCATGTATATC 57.271 36.000 0.00 0.00 34.22 1.63
4669 5466 7.508687 TGTGTGTTATGCCTTCATGTATATCT 58.491 34.615 0.00 0.00 34.22 1.98
4670 5467 8.646900 TGTGTGTTATGCCTTCATGTATATCTA 58.353 33.333 0.00 0.00 34.22 1.98
4671 5468 9.658799 GTGTGTTATGCCTTCATGTATATCTAT 57.341 33.333 0.00 0.00 34.22 1.98
4735 5532 8.606040 TTTGATGAAATTTGAATTTGGAGTCC 57.394 30.769 0.73 0.73 38.64 3.85
4736 5533 7.543359 TGATGAAATTTGAATTTGGAGTCCT 57.457 32.000 11.33 0.00 38.64 3.85
4737 5534 7.605449 TGATGAAATTTGAATTTGGAGTCCTC 58.395 34.615 11.33 0.00 38.64 3.71
4752 5549 3.160047 CTCCATGGAGGCCGAGCT 61.160 66.667 31.14 0.00 38.51 4.09
4753 5550 3.157252 TCCATGGAGGCCGAGCTC 61.157 66.667 11.44 2.73 37.29 4.09
4754 5551 4.247380 CCATGGAGGCCGAGCTCC 62.247 72.222 5.56 0.00 40.05 4.70
4757 5554 2.927856 TGGAGGCCGAGCTCCAAA 60.928 61.111 8.96 0.00 45.68 3.28
4758 5555 2.124942 GGAGGCCGAGCTCCAAAG 60.125 66.667 8.47 0.00 39.45 2.77
4759 5556 2.124942 GAGGCCGAGCTCCAAAGG 60.125 66.667 8.47 4.44 0.00 3.11
4763 5560 4.326255 CCGAGCTCCAAAGGCAAT 57.674 55.556 8.47 0.00 0.00 3.56
4764 5561 2.571548 CCGAGCTCCAAAGGCAATT 58.428 52.632 8.47 0.00 0.00 2.32
4765 5562 0.890683 CCGAGCTCCAAAGGCAATTT 59.109 50.000 8.47 0.00 0.00 1.82
4766 5563 1.135286 CCGAGCTCCAAAGGCAATTTC 60.135 52.381 8.47 0.00 0.00 2.17
4767 5564 1.135286 CGAGCTCCAAAGGCAATTTCC 60.135 52.381 8.47 0.00 0.00 3.13
4768 5565 0.890683 AGCTCCAAAGGCAATTTCCG 59.109 50.000 0.00 0.00 0.00 4.30
4769 5566 0.603065 GCTCCAAAGGCAATTTCCGT 59.397 50.000 0.00 0.00 0.00 4.69
4770 5567 1.000843 GCTCCAAAGGCAATTTCCGTT 59.999 47.619 0.00 0.00 0.00 4.44
4771 5568 2.676076 CTCCAAAGGCAATTTCCGTTG 58.324 47.619 14.13 14.13 42.63 4.10
4772 5569 2.035632 TCCAAAGGCAATTTCCGTTGT 58.964 42.857 18.17 0.00 41.82 3.32
4773 5570 2.432510 TCCAAAGGCAATTTCCGTTGTT 59.567 40.909 18.17 0.00 41.82 2.83
4774 5571 2.543430 CCAAAGGCAATTTCCGTTGTTG 59.457 45.455 18.17 8.35 41.82 3.33
4775 5572 3.452474 CAAAGGCAATTTCCGTTGTTGA 58.548 40.909 13.14 0.00 39.62 3.18
4776 5573 3.810310 AAGGCAATTTCCGTTGTTGAA 57.190 38.095 0.00 0.00 0.00 2.69
4777 5574 3.092334 AGGCAATTTCCGTTGTTGAAC 57.908 42.857 0.00 0.00 0.00 3.18
5252 6049 1.153901 CGGCTTCTTCGAAGCGGTA 60.154 57.895 20.56 0.00 43.89 4.02
5492 6290 2.725641 CAGGTCGTGACGGTGACA 59.274 61.111 4.70 0.00 36.83 3.58
6195 7015 2.490903 GCTGAGTGGATGATTTTGCTGT 59.509 45.455 0.00 0.00 0.00 4.40
6215 7035 2.824041 AGCGCGCCCGATGAAAAT 60.824 55.556 30.33 0.79 36.29 1.82
6222 7042 0.657840 GCCCGATGAAAATCTGGTCG 59.342 55.000 0.00 0.00 0.00 4.79
6265 7085 5.500931 GCGAGAAAAGAAGGTGTCGATAATG 60.501 44.000 0.00 0.00 0.00 1.90
6273 7093 5.875359 AGAAGGTGTCGATAATGGTTTCTTC 59.125 40.000 0.00 0.00 0.00 2.87
6279 7099 7.308348 GGTGTCGATAATGGTTTCTTCTGAAAA 60.308 37.037 0.00 0.00 42.94 2.29
6325 7145 8.391106 ACACTAAAAGAAATCGTGATTAGATGC 58.609 33.333 0.00 0.00 0.00 3.91
6326 7146 7.852945 CACTAAAAGAAATCGTGATTAGATGCC 59.147 37.037 0.00 0.00 0.00 4.40
6327 7147 5.757850 AAAGAAATCGTGATTAGATGCCC 57.242 39.130 0.00 0.00 0.00 5.36
6328 7148 3.393800 AGAAATCGTGATTAGATGCCCG 58.606 45.455 0.00 0.00 0.00 6.13
6329 7149 2.169832 AATCGTGATTAGATGCCCGG 57.830 50.000 0.00 0.00 0.00 5.73
6330 7150 1.338107 ATCGTGATTAGATGCCCGGA 58.662 50.000 0.73 0.00 0.00 5.14
6331 7151 1.116308 TCGTGATTAGATGCCCGGAA 58.884 50.000 0.73 0.00 0.00 4.30
6332 7152 1.202486 TCGTGATTAGATGCCCGGAAC 60.202 52.381 0.73 0.00 0.00 3.62
6420 7240 8.994170 CGATACAGAGAACATGATTAGTAGAGA 58.006 37.037 0.00 0.00 0.00 3.10
6489 7310 4.249661 TGAAAAGAAAAACACAGCCAACC 58.750 39.130 0.00 0.00 0.00 3.77
6540 7361 5.551760 AAAAACTGCATCGACTATCAAGG 57.448 39.130 0.00 0.00 0.00 3.61
6542 7363 3.724508 ACTGCATCGACTATCAAGGAG 57.275 47.619 0.00 0.00 0.00 3.69
6546 7367 3.318275 TGCATCGACTATCAAGGAGGTAC 59.682 47.826 0.00 0.00 0.00 3.34
6549 7370 5.335035 GCATCGACTATCAAGGAGGTACTAC 60.335 48.000 0.00 0.00 41.55 2.73
6550 7371 5.363562 TCGACTATCAAGGAGGTACTACA 57.636 43.478 0.00 0.00 46.07 2.74
6552 7373 6.182627 TCGACTATCAAGGAGGTACTACAAA 58.817 40.000 0.00 0.00 46.07 2.83
6553 7374 6.094603 TCGACTATCAAGGAGGTACTACAAAC 59.905 42.308 0.00 0.00 46.07 2.93
6554 7375 6.205101 ACTATCAAGGAGGTACTACAAACG 57.795 41.667 0.00 0.00 46.07 3.60
6556 7377 6.886459 ACTATCAAGGAGGTACTACAAACGTA 59.114 38.462 0.00 0.00 46.07 3.57
6557 7378 6.786967 ATCAAGGAGGTACTACAAACGTAT 57.213 37.500 0.00 0.00 46.07 3.06
6560 7381 7.765307 TCAAGGAGGTACTACAAACGTATAAG 58.235 38.462 0.00 0.00 46.07 1.73
6561 7382 6.705863 AGGAGGTACTACAAACGTATAAGG 57.294 41.667 0.00 0.00 46.07 2.69
6562 7383 5.068329 AGGAGGTACTACAAACGTATAAGGC 59.932 44.000 0.00 0.00 46.07 4.35
6563 7384 4.925068 AGGTACTACAAACGTATAAGGCG 58.075 43.478 0.00 0.00 36.02 5.52
6564 7385 3.487207 GGTACTACAAACGTATAAGGCGC 59.513 47.826 0.00 0.00 0.00 6.53
6565 7386 3.235157 ACTACAAACGTATAAGGCGCA 57.765 42.857 10.83 0.00 0.00 6.09
6566 7387 3.587923 ACTACAAACGTATAAGGCGCAA 58.412 40.909 10.83 0.00 0.00 4.85
6567 7388 3.995705 ACTACAAACGTATAAGGCGCAAA 59.004 39.130 10.83 0.00 0.00 3.68
6568 7389 3.900388 ACAAACGTATAAGGCGCAAAA 57.100 38.095 10.83 0.00 0.00 2.44
6569 7390 4.226113 ACAAACGTATAAGGCGCAAAAA 57.774 36.364 10.83 0.00 0.00 1.94
6595 7430 1.131126 CGAACAAGGCGCAAAGATCAT 59.869 47.619 10.83 0.00 0.00 2.45
6603 7438 2.182825 GCGCAAAGATCATGCAAGAAG 58.817 47.619 19.54 7.38 44.01 2.85
6612 7447 1.077212 ATGCAAGAAGAGCGCCCAT 60.077 52.632 2.29 0.00 33.85 4.00
6613 7448 1.099879 ATGCAAGAAGAGCGCCCATC 61.100 55.000 2.29 0.00 33.85 3.51
6626 7463 1.886222 CGCCCATCTTCACCCTGAAAA 60.886 52.381 0.00 0.00 35.73 2.29
6679 7516 4.379243 CTGCGACCTCGGCCAACT 62.379 66.667 2.24 0.00 40.23 3.16
6823 7660 3.702048 CCCCGGCGAAGGAAGACA 61.702 66.667 9.30 0.00 0.00 3.41
6914 7757 2.177531 GCAGATGCGGCTGTGTTG 59.822 61.111 0.00 0.00 38.17 3.33
6915 7758 2.872557 CAGATGCGGCTGTGTTGG 59.127 61.111 0.00 0.00 0.00 3.77
6916 7759 1.968017 CAGATGCGGCTGTGTTGGT 60.968 57.895 0.00 0.00 0.00 3.67
6917 7760 1.228245 AGATGCGGCTGTGTTGGTT 60.228 52.632 0.00 0.00 0.00 3.67
6918 7761 0.036164 AGATGCGGCTGTGTTGGTTA 59.964 50.000 0.00 0.00 0.00 2.85
6919 7762 0.447801 GATGCGGCTGTGTTGGTTAG 59.552 55.000 0.00 0.00 0.00 2.34
6920 7763 0.250727 ATGCGGCTGTGTTGGTTAGT 60.251 50.000 0.00 0.00 0.00 2.24
6921 7764 1.163420 TGCGGCTGTGTTGGTTAGTG 61.163 55.000 0.00 0.00 0.00 2.74
6922 7765 1.852067 GCGGCTGTGTTGGTTAGTGG 61.852 60.000 0.00 0.00 0.00 4.00
6923 7766 0.534203 CGGCTGTGTTGGTTAGTGGT 60.534 55.000 0.00 0.00 0.00 4.16
6928 7771 3.250040 GCTGTGTTGGTTAGTGGTTACAG 59.750 47.826 0.00 0.00 37.82 2.74
6976 7819 1.336240 TGAGTGAGTGTGTGCGAGATG 60.336 52.381 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 3.505680 CCCTGAGAGAATATCCTCGTGAG 59.494 52.174 0.00 0.00 38.19 3.51
175 176 8.967664 AAGTATAAACCATTCCGTATAGCAAA 57.032 30.769 0.00 0.00 0.00 3.68
259 261 5.182487 ACTTTCAAATTTTTCCACCGCTTT 58.818 33.333 0.00 0.00 0.00 3.51
286 288 1.626356 ATCGCTGCTTCCTGGCCTAA 61.626 55.000 3.32 0.00 0.00 2.69
288 290 2.976490 AATCGCTGCTTCCTGGCCT 61.976 57.895 3.32 0.00 0.00 5.19
424 426 2.438021 GGGTAGCATCCCACATAGAACA 59.562 50.000 10.75 0.00 46.30 3.18
625 627 2.355837 ACATCGTTCGCACGCACT 60.356 55.556 1.72 0.00 46.70 4.40
632 634 0.026803 GGCTTGATGACATCGTTCGC 59.973 55.000 10.79 9.53 0.00 4.70
651 653 3.827898 GTCGTCGGAGGCTCAGGG 61.828 72.222 17.69 8.42 0.00 4.45
1230 1248 4.203076 GCGACCGGGTGCTCGTAT 62.203 66.667 3.30 0.00 32.30 3.06
1365 1388 2.556287 GCGAAAAGTCCAGTGGCG 59.444 61.111 3.51 1.88 0.00 5.69
1395 1418 3.553828 AGAGGAACAAGAAAACGTGGA 57.446 42.857 0.00 0.00 0.00 4.02
1409 1432 3.814577 GCAGAAGCACGTAGAGGAA 57.185 52.632 0.00 0.00 41.58 3.36
1427 1450 1.139163 GCGCCACTTGTTTTGGAATG 58.861 50.000 0.00 0.00 36.02 2.67
1428 1451 1.039856 AGCGCCACTTGTTTTGGAAT 58.960 45.000 2.29 0.00 36.02 3.01
1429 1452 0.820871 AAGCGCCACTTGTTTTGGAA 59.179 45.000 2.29 0.00 37.17 3.53
1431 1454 0.102120 TGAAGCGCCACTTGTTTTGG 59.898 50.000 2.29 0.00 39.29 3.28
1432 1455 1.202290 ACTGAAGCGCCACTTGTTTTG 60.202 47.619 2.29 0.00 39.29 2.44
1439 1476 1.202651 AGTGTAAACTGAAGCGCCACT 60.203 47.619 2.29 3.78 0.00 4.00
1481 1526 3.076851 GCTTCTGAGCGCGAACTC 58.923 61.111 12.10 8.79 39.48 3.01
1489 1534 1.451028 AGGAATGCCGCTTCTGAGC 60.451 57.895 0.00 0.00 45.65 4.26
1490 1535 1.712977 GCAGGAATGCCGCTTCTGAG 61.713 60.000 0.00 0.00 39.96 3.35
1491 1536 1.746615 GCAGGAATGCCGCTTCTGA 60.747 57.895 0.00 0.00 39.96 3.27
1492 1537 2.042259 TGCAGGAATGCCGCTTCTG 61.042 57.895 7.87 0.00 39.96 3.02
1493 1538 2.042831 GTGCAGGAATGCCGCTTCT 61.043 57.895 7.87 0.00 39.96 2.85
1494 1539 2.486966 GTGCAGGAATGCCGCTTC 59.513 61.111 7.87 0.00 39.96 3.86
1495 1540 3.064324 GGTGCAGGAATGCCGCTT 61.064 61.111 7.87 0.00 39.96 4.68
1507 1552 2.112297 GGGGTTTCACTCGGTGCA 59.888 61.111 0.00 0.00 32.98 4.57
1582 1627 4.473520 AGGCGTGCATCTTCCCGG 62.474 66.667 0.00 0.00 0.00 5.73
1695 1740 3.325870 TGTTCATGGTAGTCAAGAAGCG 58.674 45.455 0.00 0.00 34.29 4.68
1699 1747 4.515191 GCAGTTTGTTCATGGTAGTCAAGA 59.485 41.667 0.00 0.00 0.00 3.02
1722 1770 4.000557 GGTGACACGCGCACAGTG 62.001 66.667 5.73 10.51 44.57 3.66
1723 1771 4.522689 TGGTGACACGCGCACAGT 62.523 61.111 5.73 1.26 37.99 3.55
1724 1772 3.268603 TTGGTGACACGCGCACAG 61.269 61.111 5.73 0.00 42.67 3.66
1725 1773 3.568743 GTTGGTGACACGCGCACA 61.569 61.111 5.73 0.24 42.67 4.57
1726 1774 3.223435 GAGTTGGTGACACGCGCAC 62.223 63.158 5.73 6.38 42.67 5.34
1727 1775 2.964925 GAGTTGGTGACACGCGCA 60.965 61.111 5.73 0.00 42.67 6.09
1728 1776 2.964925 TGAGTTGGTGACACGCGC 60.965 61.111 5.73 0.00 42.67 6.86
1729 1777 2.594962 GGTGAGTTGGTGACACGCG 61.595 63.158 3.53 3.53 42.67 6.01
1730 1778 0.884704 ATGGTGAGTTGGTGACACGC 60.885 55.000 0.00 0.00 42.67 5.34
1731 1779 0.867746 CATGGTGAGTTGGTGACACG 59.132 55.000 0.00 0.00 42.67 4.49
1732 1780 2.254546 TCATGGTGAGTTGGTGACAC 57.745 50.000 0.00 0.00 42.67 3.67
1733 1781 2.849942 CTTCATGGTGAGTTGGTGACA 58.150 47.619 0.00 0.00 39.83 3.58
1734 1782 1.537202 GCTTCATGGTGAGTTGGTGAC 59.463 52.381 0.00 0.00 0.00 3.67
1791 1839 3.876914 CGCTAGCTGATTAATGGTTTCCA 59.123 43.478 13.93 0.00 38.19 3.53
1866 1914 3.570638 CTGAATGGAGCCGCGCAG 61.571 66.667 8.75 0.00 0.00 5.18
1877 1925 4.201724 GCTACCGCTAACTGTTTCTGAATG 60.202 45.833 0.00 0.00 0.00 2.67
1912 1960 1.658686 AAAGGACGGCGCAACAAACA 61.659 50.000 10.83 0.00 0.00 2.83
1984 2032 3.688673 GGCCTTTGAAATGAGAGTGAGAG 59.311 47.826 0.00 0.00 0.00 3.20
1985 2033 3.560025 GGGCCTTTGAAATGAGAGTGAGA 60.560 47.826 0.84 0.00 0.00 3.27
1986 2034 2.751806 GGGCCTTTGAAATGAGAGTGAG 59.248 50.000 0.84 0.00 0.00 3.51
1987 2035 2.555227 GGGGCCTTTGAAATGAGAGTGA 60.555 50.000 0.84 0.00 0.00 3.41
1988 2036 1.821136 GGGGCCTTTGAAATGAGAGTG 59.179 52.381 0.84 0.00 0.00 3.51
1989 2037 1.272704 GGGGGCCTTTGAAATGAGAGT 60.273 52.381 0.84 0.00 0.00 3.24
2098 2146 4.099419 TGCTCGATAGGACAAAAGCAGATA 59.901 41.667 0.00 0.00 35.02 1.98
2102 2150 2.621338 CTGCTCGATAGGACAAAAGCA 58.379 47.619 0.00 0.00 37.41 3.91
2112 2160 1.268794 ACAAGTAGCGCTGCTCGATAG 60.269 52.381 28.48 17.04 39.96 2.08
2113 2161 0.738975 ACAAGTAGCGCTGCTCGATA 59.261 50.000 28.48 0.00 40.44 2.92
2128 2176 2.014554 ACGACGCGCACAGTACAAG 61.015 57.895 5.73 0.00 0.00 3.16
2142 2195 1.067846 GGGAATTCAAAAGGCCACGAC 60.068 52.381 5.01 0.00 0.00 4.34
2190 2245 5.768164 GGATGGTCCACGGTAAATGATTAAT 59.232 40.000 0.00 0.00 36.28 1.40
2191 2246 5.104277 AGGATGGTCCACGGTAAATGATTAA 60.104 40.000 0.00 0.00 39.61 1.40
2237 2292 3.914364 CGTCAAGGTTTTAAATCAGCAGC 59.086 43.478 0.00 0.00 0.00 5.25
2279 2338 2.094675 CCCACTGAAAATGCTACCTGG 58.905 52.381 0.00 0.00 0.00 4.45
2347 2406 1.228737 CCATTGACAAACCCCCGGT 60.229 57.895 0.00 0.00 37.65 5.28
2348 2407 2.645192 GCCATTGACAAACCCCCGG 61.645 63.158 0.00 0.00 0.00 5.73
2349 2408 2.969827 GCCATTGACAAACCCCCG 59.030 61.111 0.00 0.00 0.00 5.73
2350 2409 1.873270 GACGCCATTGACAAACCCCC 61.873 60.000 0.00 0.00 0.00 5.40
2373 2432 0.322997 CTCCTCGACCCACAGACTCT 60.323 60.000 0.00 0.00 0.00 3.24
2439 2512 3.577649 ATATATCCAGTTGGTCGAGCG 57.422 47.619 10.46 0.00 36.34 5.03
2552 2890 5.008019 ACACTAATGCAACTCTGTTTCACTG 59.992 40.000 0.00 0.00 0.00 3.66
2553 2891 5.126067 ACACTAATGCAACTCTGTTTCACT 58.874 37.500 0.00 0.00 0.00 3.41
2554 2892 5.007626 TGACACTAATGCAACTCTGTTTCAC 59.992 40.000 0.00 0.00 0.00 3.18
2555 2893 5.007626 GTGACACTAATGCAACTCTGTTTCA 59.992 40.000 0.00 0.00 0.00 2.69
2556 2894 5.237344 AGTGACACTAATGCAACTCTGTTTC 59.763 40.000 6.24 0.00 0.00 2.78
2557 2895 5.126067 AGTGACACTAATGCAACTCTGTTT 58.874 37.500 6.24 0.00 0.00 2.83
2559 2897 4.342862 AGTGACACTAATGCAACTCTGT 57.657 40.909 6.24 0.00 0.00 3.41
2560 2898 4.867047 CCTAGTGACACTAATGCAACTCTG 59.133 45.833 15.96 1.25 29.00 3.35
2561 2899 4.772624 TCCTAGTGACACTAATGCAACTCT 59.227 41.667 15.96 0.00 29.00 3.24
2562 2900 5.073311 TCCTAGTGACACTAATGCAACTC 57.927 43.478 15.96 0.00 29.00 3.01
2563 2901 5.683876 ATCCTAGTGACACTAATGCAACT 57.316 39.130 15.96 0.00 29.00 3.16
2571 2921 6.546403 GGTGAATCAGTATCCTAGTGACACTA 59.454 42.308 14.53 14.53 40.64 2.74
2722 3072 5.950544 TCCCATAATATCAGTTATCGGGG 57.049 43.478 0.00 0.00 35.43 5.73
2723 3073 7.165485 TGTTTCCCATAATATCAGTTATCGGG 58.835 38.462 0.00 0.00 35.71 5.14
2724 3074 8.792830 ATGTTTCCCATAATATCAGTTATCGG 57.207 34.615 0.00 0.00 29.82 4.18
2882 3245 1.606601 CCAGACCAGGTCCTGTCGA 60.607 63.158 16.72 0.00 32.18 4.20
2959 3322 3.189287 AGAAAGGCGAGCACACATAAAAG 59.811 43.478 0.00 0.00 0.00 2.27
3011 3374 9.331282 CAACAACCAAAAATACCCATAAAGAAA 57.669 29.630 0.00 0.00 0.00 2.52
3018 3381 3.977326 ACCCAACAACCAAAAATACCCAT 59.023 39.130 0.00 0.00 0.00 4.00
4355 5152 0.319641 AGAGCCAAACGTCCGTTCTC 60.320 55.000 5.44 8.31 37.35 2.87
4356 5153 0.319641 GAGAGCCAAACGTCCGTTCT 60.320 55.000 5.44 0.00 37.35 3.01
4357 5154 1.615107 CGAGAGCCAAACGTCCGTTC 61.615 60.000 5.44 0.00 37.35 3.95
4358 5155 1.663702 CGAGAGCCAAACGTCCGTT 60.664 57.895 0.00 0.00 40.45 4.44
4359 5156 2.049433 CGAGAGCCAAACGTCCGT 60.049 61.111 0.00 0.00 0.00 4.69
4360 5157 2.809601 CCGAGAGCCAAACGTCCG 60.810 66.667 0.00 0.00 0.00 4.79
4361 5158 1.737008 GACCGAGAGCCAAACGTCC 60.737 63.158 0.00 0.00 0.00 4.79
4362 5159 0.733223 GAGACCGAGAGCCAAACGTC 60.733 60.000 0.00 0.00 0.00 4.34
4363 5160 1.289380 GAGACCGAGAGCCAAACGT 59.711 57.895 0.00 0.00 0.00 3.99
4364 5161 1.446272 GGAGACCGAGAGCCAAACG 60.446 63.158 0.00 0.00 0.00 3.60
4365 5162 0.250513 ATGGAGACCGAGAGCCAAAC 59.749 55.000 0.00 0.00 33.51 2.93
4366 5163 0.250234 CATGGAGACCGAGAGCCAAA 59.750 55.000 0.00 0.00 33.51 3.28
4367 5164 1.617018 CCATGGAGACCGAGAGCCAA 61.617 60.000 5.56 0.00 33.51 4.52
4368 5165 2.060383 CCATGGAGACCGAGAGCCA 61.060 63.158 5.56 0.00 34.45 4.75
4369 5166 1.743321 CTCCATGGAGACCGAGAGCC 61.743 65.000 34.54 0.00 44.53 4.70
4370 5167 1.739049 CTCCATGGAGACCGAGAGC 59.261 63.158 34.54 0.00 44.53 4.09
4371 5168 1.743321 GCCTCCATGGAGACCGAGAG 61.743 65.000 38.37 22.32 44.53 3.20
4372 5169 1.758514 GCCTCCATGGAGACCGAGA 60.759 63.158 38.37 4.21 44.53 4.04
4373 5170 2.801631 GGCCTCCATGGAGACCGAG 61.802 68.421 38.37 23.66 44.53 4.63
4374 5171 2.764128 GGCCTCCATGGAGACCGA 60.764 66.667 38.37 5.81 44.53 4.69
4375 5172 1.987807 AATGGCCTCCATGGAGACCG 61.988 60.000 38.37 24.35 45.99 4.79
4376 5173 0.259938 AAATGGCCTCCATGGAGACC 59.740 55.000 38.37 36.12 44.40 3.85
4377 5174 2.149973 AAAATGGCCTCCATGGAGAC 57.850 50.000 38.37 29.35 44.40 3.36
4378 5175 2.925966 AAAAATGGCCTCCATGGAGA 57.074 45.000 38.37 22.09 44.40 3.71
4434 5231 8.496707 ACTTGCACAATTCTTTTCAGATTTTT 57.503 26.923 0.00 0.00 0.00 1.94
4435 5232 9.598517 TTACTTGCACAATTCTTTTCAGATTTT 57.401 25.926 0.00 0.00 0.00 1.82
4436 5233 9.598517 TTTACTTGCACAATTCTTTTCAGATTT 57.401 25.926 0.00 0.00 0.00 2.17
4437 5234 9.034544 GTTTACTTGCACAATTCTTTTCAGATT 57.965 29.630 0.00 0.00 0.00 2.40
4438 5235 8.196771 TGTTTACTTGCACAATTCTTTTCAGAT 58.803 29.630 0.00 0.00 0.00 2.90
4439 5236 7.542890 TGTTTACTTGCACAATTCTTTTCAGA 58.457 30.769 0.00 0.00 0.00 3.27
4440 5237 7.754069 TGTTTACTTGCACAATTCTTTTCAG 57.246 32.000 0.00 0.00 0.00 3.02
4441 5238 8.539770 TTTGTTTACTTGCACAATTCTTTTCA 57.460 26.923 0.00 0.00 32.96 2.69
4445 5242 9.762933 ACATATTTGTTTACTTGCACAATTCTT 57.237 25.926 0.00 0.00 32.96 2.52
4446 5243 9.762933 AACATATTTGTTTACTTGCACAATTCT 57.237 25.926 0.00 0.00 43.57 2.40
4450 5247 9.973450 ACATAACATATTTGTTTACTTGCACAA 57.027 25.926 6.85 0.00 43.57 3.33
4451 5248 9.404348 CACATAACATATTTGTTTACTTGCACA 57.596 29.630 6.85 0.00 43.57 4.57
4452 5249 9.405587 ACACATAACATATTTGTTTACTTGCAC 57.594 29.630 6.85 0.00 43.57 4.57
4472 5269 9.508642 TCCTGAATTTTTACACACATACACATA 57.491 29.630 0.00 0.00 0.00 2.29
4473 5270 8.402798 TCCTGAATTTTTACACACATACACAT 57.597 30.769 0.00 0.00 0.00 3.21
4474 5271 7.809546 TCCTGAATTTTTACACACATACACA 57.190 32.000 0.00 0.00 0.00 3.72
4475 5272 8.511321 TCATCCTGAATTTTTACACACATACAC 58.489 33.333 0.00 0.00 0.00 2.90
4476 5273 8.628630 TCATCCTGAATTTTTACACACATACA 57.371 30.769 0.00 0.00 0.00 2.29
4477 5274 9.906660 TTTCATCCTGAATTTTTACACACATAC 57.093 29.630 0.00 0.00 36.11 2.39
4480 5277 9.906660 GTATTTCATCCTGAATTTTTACACACA 57.093 29.630 0.00 0.00 36.11 3.72
4481 5278 9.061610 CGTATTTCATCCTGAATTTTTACACAC 57.938 33.333 0.00 0.00 36.11 3.82
4482 5279 8.788806 ACGTATTTCATCCTGAATTTTTACACA 58.211 29.630 0.00 0.00 36.11 3.72
4483 5280 9.620660 AACGTATTTCATCCTGAATTTTTACAC 57.379 29.630 0.00 0.00 36.11 2.90
4484 5281 9.619316 CAACGTATTTCATCCTGAATTTTTACA 57.381 29.630 0.00 0.00 36.11 2.41
4485 5282 9.834628 TCAACGTATTTCATCCTGAATTTTTAC 57.165 29.630 0.00 0.00 36.11 2.01
4487 5284 9.757227 TTTCAACGTATTTCATCCTGAATTTTT 57.243 25.926 0.00 0.00 36.11 1.94
4488 5285 9.927668 ATTTCAACGTATTTCATCCTGAATTTT 57.072 25.926 0.00 0.00 36.11 1.82
4489 5286 9.357652 CATTTCAACGTATTTCATCCTGAATTT 57.642 29.630 0.00 0.00 36.11 1.82
4490 5287 7.489113 GCATTTCAACGTATTTCATCCTGAATT 59.511 33.333 0.00 0.00 36.11 2.17
4491 5288 6.974622 GCATTTCAACGTATTTCATCCTGAAT 59.025 34.615 0.00 0.00 36.11 2.57
4492 5289 6.321717 GCATTTCAACGTATTTCATCCTGAA 58.678 36.000 0.00 0.00 34.03 3.02
4493 5290 5.447144 CGCATTTCAACGTATTTCATCCTGA 60.447 40.000 0.00 0.00 0.00 3.86
4494 5291 4.730042 CGCATTTCAACGTATTTCATCCTG 59.270 41.667 0.00 0.00 0.00 3.86
4495 5292 4.634004 TCGCATTTCAACGTATTTCATCCT 59.366 37.500 0.00 0.00 0.00 3.24
4496 5293 4.728608 GTCGCATTTCAACGTATTTCATCC 59.271 41.667 0.00 0.00 0.00 3.51
4497 5294 4.728608 GGTCGCATTTCAACGTATTTCATC 59.271 41.667 0.00 0.00 0.00 2.92
4498 5295 4.394920 AGGTCGCATTTCAACGTATTTCAT 59.605 37.500 0.00 0.00 0.00 2.57
4499 5296 3.749088 AGGTCGCATTTCAACGTATTTCA 59.251 39.130 0.00 0.00 0.00 2.69
4500 5297 4.088648 CAGGTCGCATTTCAACGTATTTC 58.911 43.478 0.00 0.00 0.00 2.17
4501 5298 3.500680 ACAGGTCGCATTTCAACGTATTT 59.499 39.130 0.00 0.00 0.00 1.40
4502 5299 3.071479 ACAGGTCGCATTTCAACGTATT 58.929 40.909 0.00 0.00 0.00 1.89
4503 5300 2.695359 ACAGGTCGCATTTCAACGTAT 58.305 42.857 0.00 0.00 0.00 3.06
4504 5301 2.157834 ACAGGTCGCATTTCAACGTA 57.842 45.000 0.00 0.00 0.00 3.57
4505 5302 1.796459 GTACAGGTCGCATTTCAACGT 59.204 47.619 0.00 0.00 0.00 3.99
4506 5303 1.795872 TGTACAGGTCGCATTTCAACG 59.204 47.619 0.00 0.00 0.00 4.10
4507 5304 3.889196 TTGTACAGGTCGCATTTCAAC 57.111 42.857 0.00 0.00 0.00 3.18
4508 5305 4.902443 TTTTGTACAGGTCGCATTTCAA 57.098 36.364 0.00 0.00 0.00 2.69
4509 5306 4.261405 CCTTTTTGTACAGGTCGCATTTCA 60.261 41.667 0.00 0.00 0.00 2.69
4510 5307 4.023536 TCCTTTTTGTACAGGTCGCATTTC 60.024 41.667 0.00 0.00 0.00 2.17
4511 5308 3.886505 TCCTTTTTGTACAGGTCGCATTT 59.113 39.130 0.00 0.00 0.00 2.32
4512 5309 3.252458 GTCCTTTTTGTACAGGTCGCATT 59.748 43.478 0.00 0.00 0.00 3.56
4513 5310 2.812011 GTCCTTTTTGTACAGGTCGCAT 59.188 45.455 0.00 0.00 0.00 4.73
4514 5311 2.215196 GTCCTTTTTGTACAGGTCGCA 58.785 47.619 0.00 0.00 0.00 5.10
4515 5312 2.215196 TGTCCTTTTTGTACAGGTCGC 58.785 47.619 0.00 0.00 0.00 5.19
4516 5313 4.886247 TTTGTCCTTTTTGTACAGGTCG 57.114 40.909 0.00 0.00 0.00 4.79
4517 5314 5.300792 TGGATTTGTCCTTTTTGTACAGGTC 59.699 40.000 0.00 0.00 0.00 3.85
4518 5315 5.205056 TGGATTTGTCCTTTTTGTACAGGT 58.795 37.500 0.00 0.00 0.00 4.00
4519 5316 5.782893 TGGATTTGTCCTTTTTGTACAGG 57.217 39.130 0.00 0.00 0.00 4.00
4520 5317 6.158598 CCATGGATTTGTCCTTTTTGTACAG 58.841 40.000 5.56 0.00 0.00 2.74
4521 5318 5.011533 CCCATGGATTTGTCCTTTTTGTACA 59.988 40.000 15.22 0.00 0.00 2.90
4522 5319 5.478407 CCCATGGATTTGTCCTTTTTGTAC 58.522 41.667 15.22 0.00 0.00 2.90
4523 5320 4.020662 GCCCATGGATTTGTCCTTTTTGTA 60.021 41.667 15.22 0.00 0.00 2.41
4524 5321 3.244526 GCCCATGGATTTGTCCTTTTTGT 60.245 43.478 15.22 0.00 0.00 2.83
4525 5322 3.008266 AGCCCATGGATTTGTCCTTTTTG 59.992 43.478 15.22 0.00 0.00 2.44
4526 5323 3.250617 AGCCCATGGATTTGTCCTTTTT 58.749 40.909 15.22 0.00 0.00 1.94
4527 5324 2.906568 AGCCCATGGATTTGTCCTTTT 58.093 42.857 15.22 0.00 0.00 2.27
4528 5325 2.629017 AGCCCATGGATTTGTCCTTT 57.371 45.000 15.22 0.00 0.00 3.11
4529 5326 3.269381 TCTTAGCCCATGGATTTGTCCTT 59.731 43.478 15.22 0.00 0.00 3.36
4530 5327 2.852449 TCTTAGCCCATGGATTTGTCCT 59.148 45.455 15.22 0.20 0.00 3.85
4531 5328 3.217626 CTCTTAGCCCATGGATTTGTCC 58.782 50.000 15.22 0.00 0.00 4.02
4532 5329 3.117888 TCCTCTTAGCCCATGGATTTGTC 60.118 47.826 15.22 0.00 0.00 3.18
4533 5330 2.852449 TCCTCTTAGCCCATGGATTTGT 59.148 45.455 15.22 0.00 0.00 2.83
4534 5331 3.582998 TCCTCTTAGCCCATGGATTTG 57.417 47.619 15.22 0.00 0.00 2.32
4535 5332 3.723681 TCATCCTCTTAGCCCATGGATTT 59.276 43.478 15.22 0.06 35.57 2.17
4536 5333 3.330198 TCATCCTCTTAGCCCATGGATT 58.670 45.455 15.22 2.93 35.57 3.01
4537 5334 2.995746 TCATCCTCTTAGCCCATGGAT 58.004 47.619 15.22 3.69 37.96 3.41
4538 5335 2.494888 TCATCCTCTTAGCCCATGGA 57.505 50.000 15.22 0.00 0.00 3.41
4539 5336 3.803186 ATTCATCCTCTTAGCCCATGG 57.197 47.619 4.14 4.14 0.00 3.66
4540 5337 5.495926 ACTATTCATCCTCTTAGCCCATG 57.504 43.478 0.00 0.00 0.00 3.66
4541 5338 7.195474 AGATACTATTCATCCTCTTAGCCCAT 58.805 38.462 0.00 0.00 0.00 4.00
4542 5339 6.565974 AGATACTATTCATCCTCTTAGCCCA 58.434 40.000 0.00 0.00 0.00 5.36
4543 5340 7.489239 AAGATACTATTCATCCTCTTAGCCC 57.511 40.000 0.00 0.00 0.00 5.19
4557 5354 9.984590 TGGGGCTTTTTAACTTAAGATACTATT 57.015 29.630 10.09 0.00 0.00 1.73
4558 5355 9.628500 CTGGGGCTTTTTAACTTAAGATACTAT 57.372 33.333 10.09 0.00 0.00 2.12
4559 5356 8.828751 TCTGGGGCTTTTTAACTTAAGATACTA 58.171 33.333 10.09 0.00 0.00 1.82
4560 5357 7.696017 TCTGGGGCTTTTTAACTTAAGATACT 58.304 34.615 10.09 0.00 0.00 2.12
4561 5358 7.933215 TCTGGGGCTTTTTAACTTAAGATAC 57.067 36.000 10.09 0.00 0.00 2.24
4562 5359 9.541884 AAATCTGGGGCTTTTTAACTTAAGATA 57.458 29.630 10.09 0.00 0.00 1.98
4563 5360 8.314021 CAAATCTGGGGCTTTTTAACTTAAGAT 58.686 33.333 10.09 0.00 0.00 2.40
4564 5361 7.289084 ACAAATCTGGGGCTTTTTAACTTAAGA 59.711 33.333 10.09 0.00 0.00 2.10
4565 5362 7.441836 ACAAATCTGGGGCTTTTTAACTTAAG 58.558 34.615 0.00 0.00 0.00 1.85
4566 5363 7.289084 AGACAAATCTGGGGCTTTTTAACTTAA 59.711 33.333 0.00 0.00 32.29 1.85
4567 5364 6.780522 AGACAAATCTGGGGCTTTTTAACTTA 59.219 34.615 0.00 0.00 32.29 2.24
4568 5365 5.602561 AGACAAATCTGGGGCTTTTTAACTT 59.397 36.000 0.00 0.00 32.29 2.66
4569 5366 5.147767 AGACAAATCTGGGGCTTTTTAACT 58.852 37.500 0.00 0.00 32.29 2.24
4570 5367 5.468540 AGACAAATCTGGGGCTTTTTAAC 57.531 39.130 0.00 0.00 32.29 2.01
4571 5368 6.493189 AAAGACAAATCTGGGGCTTTTTAA 57.507 33.333 0.00 0.00 34.48 1.52
4572 5369 6.493189 AAAAGACAAATCTGGGGCTTTTTA 57.507 33.333 0.00 0.00 34.48 1.52
4573 5370 5.372343 AAAAGACAAATCTGGGGCTTTTT 57.628 34.783 0.00 0.00 34.48 1.94
4574 5371 5.372343 AAAAAGACAAATCTGGGGCTTTT 57.628 34.783 0.00 0.00 35.69 2.27
4593 5390 4.478206 TGAAATGAGGGTTGTGCAAAAA 57.522 36.364 0.00 0.00 0.00 1.94
4594 5391 4.187694 GTTGAAATGAGGGTTGTGCAAAA 58.812 39.130 0.00 0.00 0.00 2.44
4595 5392 3.196469 TGTTGAAATGAGGGTTGTGCAAA 59.804 39.130 0.00 0.00 0.00 3.68
4596 5393 2.762887 TGTTGAAATGAGGGTTGTGCAA 59.237 40.909 0.00 0.00 0.00 4.08
4597 5394 2.100584 GTGTTGAAATGAGGGTTGTGCA 59.899 45.455 0.00 0.00 0.00 4.57
4598 5395 2.100584 TGTGTTGAAATGAGGGTTGTGC 59.899 45.455 0.00 0.00 0.00 4.57
4599 5396 4.589216 ATGTGTTGAAATGAGGGTTGTG 57.411 40.909 0.00 0.00 0.00 3.33
4600 5397 5.612725 AAATGTGTTGAAATGAGGGTTGT 57.387 34.783 0.00 0.00 0.00 3.32
4601 5398 5.277442 GCAAAATGTGTTGAAATGAGGGTTG 60.277 40.000 0.00 0.00 0.00 3.77
4602 5399 4.815846 GCAAAATGTGTTGAAATGAGGGTT 59.184 37.500 0.00 0.00 0.00 4.11
4603 5400 4.379652 GCAAAATGTGTTGAAATGAGGGT 58.620 39.130 0.00 0.00 0.00 4.34
4604 5401 3.747529 GGCAAAATGTGTTGAAATGAGGG 59.252 43.478 0.00 0.00 0.00 4.30
4605 5402 3.747529 GGGCAAAATGTGTTGAAATGAGG 59.252 43.478 0.00 0.00 0.00 3.86
4606 5403 4.449743 CAGGGCAAAATGTGTTGAAATGAG 59.550 41.667 0.00 0.00 0.00 2.90
4607 5404 4.100653 TCAGGGCAAAATGTGTTGAAATGA 59.899 37.500 0.00 0.00 0.00 2.57
4608 5405 4.378774 TCAGGGCAAAATGTGTTGAAATG 58.621 39.130 0.00 0.00 0.00 2.32
4609 5406 4.686191 TCAGGGCAAAATGTGTTGAAAT 57.314 36.364 0.00 0.00 0.00 2.17
4610 5407 4.478206 TTCAGGGCAAAATGTGTTGAAA 57.522 36.364 0.00 0.00 0.00 2.69
4611 5408 4.478206 TTTCAGGGCAAAATGTGTTGAA 57.522 36.364 0.00 0.00 0.00 2.69
4612 5409 4.081198 ACTTTTCAGGGCAAAATGTGTTGA 60.081 37.500 0.00 0.00 0.00 3.18
4613 5410 4.190772 ACTTTTCAGGGCAAAATGTGTTG 58.809 39.130 0.00 0.00 0.00 3.33
4614 5411 4.486125 ACTTTTCAGGGCAAAATGTGTT 57.514 36.364 0.00 0.00 0.00 3.32
4615 5412 4.486125 AACTTTTCAGGGCAAAATGTGT 57.514 36.364 0.00 0.00 0.00 3.72
4616 5413 7.116233 GTGTATAACTTTTCAGGGCAAAATGTG 59.884 37.037 0.00 0.00 0.00 3.21
4617 5414 7.151976 GTGTATAACTTTTCAGGGCAAAATGT 58.848 34.615 0.00 0.00 0.00 2.71
4618 5415 7.151308 TGTGTATAACTTTTCAGGGCAAAATG 58.849 34.615 0.00 0.00 0.00 2.32
4619 5416 7.296628 TGTGTATAACTTTTCAGGGCAAAAT 57.703 32.000 0.00 0.00 0.00 1.82
4620 5417 6.716934 TGTGTATAACTTTTCAGGGCAAAA 57.283 33.333 0.00 0.00 0.00 2.44
4621 5418 6.266558 ACATGTGTATAACTTTTCAGGGCAAA 59.733 34.615 0.00 0.00 0.00 3.68
4622 5419 5.772672 ACATGTGTATAACTTTTCAGGGCAA 59.227 36.000 0.00 0.00 0.00 4.52
4623 5420 5.182950 CACATGTGTATAACTTTTCAGGGCA 59.817 40.000 18.03 0.00 0.00 5.36
4624 5421 5.183140 ACACATGTGTATAACTTTTCAGGGC 59.817 40.000 29.66 0.00 42.90 5.19
4625 5422 6.611381 CACACATGTGTATAACTTTTCAGGG 58.389 40.000 30.11 9.71 42.83 4.45
4636 5433 7.012232 CATGAAGGCATAACACACATGTGTATA 59.988 37.037 30.11 24.19 44.88 1.47
4637 5434 6.183360 CATGAAGGCATAACACACATGTGTAT 60.183 38.462 30.11 22.94 44.88 2.29
4638 5435 5.123661 CATGAAGGCATAACACACATGTGTA 59.876 40.000 30.11 16.40 44.88 2.90
4639 5436 4.082625 CATGAAGGCATAACACACATGTGT 60.083 41.667 25.76 25.76 46.35 3.72
4640 5437 4.082625 ACATGAAGGCATAACACACATGTG 60.083 41.667 24.25 24.25 42.90 3.21
4641 5438 4.081406 ACATGAAGGCATAACACACATGT 58.919 39.130 0.00 0.00 40.84 3.21
4642 5439 4.707030 ACATGAAGGCATAACACACATG 57.293 40.909 0.00 0.00 39.27 3.21
4643 5440 8.159447 AGATATACATGAAGGCATAACACACAT 58.841 33.333 0.00 0.00 32.27 3.21
4644 5441 7.508687 AGATATACATGAAGGCATAACACACA 58.491 34.615 0.00 0.00 32.27 3.72
4645 5442 7.969536 AGATATACATGAAGGCATAACACAC 57.030 36.000 0.00 0.00 32.27 3.82
4709 5506 9.223099 GGACTCCAAATTCAAATTTCATCAAAT 57.777 29.630 0.00 0.00 36.52 2.32
4710 5507 8.431222 AGGACTCCAAATTCAAATTTCATCAAA 58.569 29.630 0.00 0.00 36.52 2.69
4711 5508 7.965718 AGGACTCCAAATTCAAATTTCATCAA 58.034 30.769 0.00 0.00 36.52 2.57
4712 5509 7.543359 AGGACTCCAAATTCAAATTTCATCA 57.457 32.000 0.00 0.00 36.52 3.07
4735 5532 3.160047 AGCTCGGCCTCCATGGAG 61.160 66.667 31.69 31.69 41.63 3.86
4736 5533 3.157252 GAGCTCGGCCTCCATGGA 61.157 66.667 15.27 15.27 38.35 3.41
4742 5539 2.124942 CCTTTGGAGCTCGGCCTC 60.125 66.667 7.83 0.00 0.00 4.70
4743 5540 4.416738 GCCTTTGGAGCTCGGCCT 62.417 66.667 16.99 0.00 36.56 5.19
4744 5541 4.722700 TGCCTTTGGAGCTCGGCC 62.723 66.667 22.74 5.51 41.80 6.13
4745 5542 1.598701 AATTGCCTTTGGAGCTCGGC 61.599 55.000 19.97 19.97 42.78 5.54
4746 5543 0.890683 AAATTGCCTTTGGAGCTCGG 59.109 50.000 7.83 4.19 0.00 4.63
4747 5544 1.135286 GGAAATTGCCTTTGGAGCTCG 60.135 52.381 7.83 0.00 0.00 5.03
4748 5545 1.135286 CGGAAATTGCCTTTGGAGCTC 60.135 52.381 4.71 4.71 0.00 4.09
4749 5546 0.890683 CGGAAATTGCCTTTGGAGCT 59.109 50.000 0.00 0.00 0.00 4.09
4750 5547 0.603065 ACGGAAATTGCCTTTGGAGC 59.397 50.000 0.00 0.00 0.00 4.70
4751 5548 2.035832 ACAACGGAAATTGCCTTTGGAG 59.964 45.455 22.34 1.96 40.41 3.86
4752 5549 2.035632 ACAACGGAAATTGCCTTTGGA 58.964 42.857 22.34 0.00 40.41 3.53
4753 5550 2.524569 ACAACGGAAATTGCCTTTGG 57.475 45.000 22.34 7.78 40.41 3.28
4754 5551 3.452474 TCAACAACGGAAATTGCCTTTG 58.548 40.909 18.10 18.10 41.47 2.77
4755 5552 3.810310 TCAACAACGGAAATTGCCTTT 57.190 38.095 0.00 0.00 32.47 3.11
4756 5553 3.118956 TGTTCAACAACGGAAATTGCCTT 60.119 39.130 0.00 0.00 34.95 4.35
4757 5554 2.428890 TGTTCAACAACGGAAATTGCCT 59.571 40.909 0.00 0.00 34.95 4.75
4758 5555 2.538037 GTGTTCAACAACGGAAATTGCC 59.462 45.455 0.00 0.00 34.95 4.52
4759 5556 2.215363 CGTGTTCAACAACGGAAATTGC 59.785 45.455 0.00 0.00 34.95 3.56
4760 5557 2.215363 GCGTGTTCAACAACGGAAATTG 59.785 45.455 12.42 0.00 34.95 2.32
4761 5558 2.098443 AGCGTGTTCAACAACGGAAATT 59.902 40.909 12.42 0.00 34.95 1.82
4762 5559 1.673920 AGCGTGTTCAACAACGGAAAT 59.326 42.857 12.42 0.00 34.95 2.17
4763 5560 1.088306 AGCGTGTTCAACAACGGAAA 58.912 45.000 12.42 0.00 34.95 3.13
4764 5561 1.937278 TAGCGTGTTCAACAACGGAA 58.063 45.000 12.42 0.00 34.95 4.30
4765 5562 2.157834 ATAGCGTGTTCAACAACGGA 57.842 45.000 12.42 0.00 34.95 4.69
4766 5563 4.392619 TTTATAGCGTGTTCAACAACGG 57.607 40.909 12.42 0.00 34.95 4.44
5150 5947 1.153147 GAACCCGAAGATGGCCTCC 60.153 63.158 3.32 0.00 0.00 4.30
5252 6049 4.109675 CCGCCCTTCCCGGTGATT 62.110 66.667 0.00 0.00 40.84 2.57
5725 6523 4.129737 CCATCTCCGTGGCGACGT 62.130 66.667 20.00 0.00 44.54 4.34
6082 6897 1.164041 CGGCAACTTGGGTTCTTCGT 61.164 55.000 0.00 0.00 32.73 3.85
6215 7035 1.170290 TCTGCACGAAGTCGACCAGA 61.170 55.000 13.01 13.43 41.61 3.86
6222 7042 2.778659 GCATCATTTCTGCACGAAGTC 58.221 47.619 0.00 0.00 41.61 3.01
6265 7085 5.182190 GGACCTCAGATTTTCAGAAGAAACC 59.818 44.000 0.00 0.00 43.09 3.27
6299 7119 8.391106 GCATCTAATCACGATTTCTTTTAGTGT 58.609 33.333 0.00 0.00 34.71 3.55
6300 7120 7.852945 GGCATCTAATCACGATTTCTTTTAGTG 59.147 37.037 0.00 0.00 32.50 2.74
6301 7121 7.012421 GGGCATCTAATCACGATTTCTTTTAGT 59.988 37.037 0.00 0.00 32.50 2.24
6302 7122 7.355778 GGGCATCTAATCACGATTTCTTTTAG 58.644 38.462 0.00 0.00 32.50 1.85
6303 7123 6.018262 CGGGCATCTAATCACGATTTCTTTTA 60.018 38.462 0.00 0.00 32.50 1.52
6304 7124 5.220854 CGGGCATCTAATCACGATTTCTTTT 60.221 40.000 0.00 0.00 32.50 2.27
6305 7125 4.273480 CGGGCATCTAATCACGATTTCTTT 59.727 41.667 0.00 0.00 32.50 2.52
6306 7126 3.809832 CGGGCATCTAATCACGATTTCTT 59.190 43.478 0.00 0.00 32.50 2.52
6307 7127 3.393800 CGGGCATCTAATCACGATTTCT 58.606 45.455 0.00 0.00 32.50 2.52
6308 7128 2.480419 CCGGGCATCTAATCACGATTTC 59.520 50.000 0.00 0.00 32.50 2.17
6309 7129 2.104111 TCCGGGCATCTAATCACGATTT 59.896 45.455 0.00 0.00 32.50 2.17
6310 7130 1.691976 TCCGGGCATCTAATCACGATT 59.308 47.619 0.00 0.00 34.93 3.34
6311 7131 1.338107 TCCGGGCATCTAATCACGAT 58.662 50.000 0.00 0.00 0.00 3.73
6312 7132 1.116308 TTCCGGGCATCTAATCACGA 58.884 50.000 0.00 0.00 0.00 4.35
6313 7133 1.217882 GTTCCGGGCATCTAATCACG 58.782 55.000 0.00 0.00 0.00 4.35
6314 7134 1.217882 CGTTCCGGGCATCTAATCAC 58.782 55.000 0.00 0.00 0.00 3.06
6315 7135 0.105964 CCGTTCCGGGCATCTAATCA 59.894 55.000 0.00 0.00 44.15 2.57
6316 7136 2.914379 CCGTTCCGGGCATCTAATC 58.086 57.895 0.00 0.00 44.15 1.75
6327 7147 2.558554 ATCTCGTGAAGCCCGTTCCG 62.559 60.000 0.00 0.00 33.75 4.30
6328 7148 0.391263 AATCTCGTGAAGCCCGTTCC 60.391 55.000 0.00 0.00 33.75 3.62
6329 7149 0.721718 CAATCTCGTGAAGCCCGTTC 59.278 55.000 0.00 0.00 35.48 3.95
6330 7150 0.320374 TCAATCTCGTGAAGCCCGTT 59.680 50.000 0.00 0.00 0.00 4.44
6331 7151 0.389948 GTCAATCTCGTGAAGCCCGT 60.390 55.000 0.00 0.00 0.00 5.28
6332 7152 0.389817 TGTCAATCTCGTGAAGCCCG 60.390 55.000 0.00 0.00 0.00 6.13
6333 7153 1.808411 TTGTCAATCTCGTGAAGCCC 58.192 50.000 0.00 0.00 0.00 5.19
6334 7154 2.808543 ACTTTGTCAATCTCGTGAAGCC 59.191 45.455 0.00 0.00 0.00 4.35
6335 7155 3.120511 GGACTTTGTCAATCTCGTGAAGC 60.121 47.826 0.00 0.00 33.68 3.86
6391 7211 7.113658 ACTAATCATGTTCTCTGTATCGGTT 57.886 36.000 0.00 0.00 0.00 4.44
6465 7286 6.045955 GGTTGGCTGTGTTTTTCTTTTCATA 58.954 36.000 0.00 0.00 0.00 2.15
6489 7310 1.324736 GCGAAAGTCGATGCTGTTAGG 59.675 52.381 1.05 0.00 43.74 2.69
6521 7342 3.181471 CCTCCTTGATAGTCGATGCAGTT 60.181 47.826 0.00 0.00 0.00 3.16
6522 7343 2.363680 CCTCCTTGATAGTCGATGCAGT 59.636 50.000 0.00 0.00 0.00 4.40
6523 7344 2.363680 ACCTCCTTGATAGTCGATGCAG 59.636 50.000 0.00 0.00 0.00 4.41
6524 7345 2.388735 ACCTCCTTGATAGTCGATGCA 58.611 47.619 0.00 0.00 0.00 3.96
6525 7346 3.570550 AGTACCTCCTTGATAGTCGATGC 59.429 47.826 0.00 0.00 0.00 3.91
6526 7347 5.763698 TGTAGTACCTCCTTGATAGTCGATG 59.236 44.000 0.00 0.00 0.00 3.84
6527 7348 5.938279 TGTAGTACCTCCTTGATAGTCGAT 58.062 41.667 0.00 0.00 0.00 3.59
6528 7349 5.363562 TGTAGTACCTCCTTGATAGTCGA 57.636 43.478 0.00 0.00 0.00 4.20
6529 7350 6.264088 GTTTGTAGTACCTCCTTGATAGTCG 58.736 44.000 0.00 0.00 0.00 4.18
6530 7351 6.127786 ACGTTTGTAGTACCTCCTTGATAGTC 60.128 42.308 0.00 0.00 0.00 2.59
6531 7352 5.713861 ACGTTTGTAGTACCTCCTTGATAGT 59.286 40.000 0.00 0.00 0.00 2.12
6532 7353 6.205101 ACGTTTGTAGTACCTCCTTGATAG 57.795 41.667 0.00 0.00 0.00 2.08
6533 7354 7.886629 ATACGTTTGTAGTACCTCCTTGATA 57.113 36.000 0.00 0.00 33.17 2.15
6534 7355 6.786967 ATACGTTTGTAGTACCTCCTTGAT 57.213 37.500 0.00 0.00 33.17 2.57
6535 7356 7.148018 CCTTATACGTTTGTAGTACCTCCTTGA 60.148 40.741 0.00 0.00 33.17 3.02
6536 7357 6.976925 CCTTATACGTTTGTAGTACCTCCTTG 59.023 42.308 0.00 0.00 33.17 3.61
6537 7358 6.406288 GCCTTATACGTTTGTAGTACCTCCTT 60.406 42.308 0.00 0.00 33.17 3.36
6538 7359 5.068329 GCCTTATACGTTTGTAGTACCTCCT 59.932 44.000 0.00 0.00 33.17 3.69
6539 7360 5.284864 GCCTTATACGTTTGTAGTACCTCC 58.715 45.833 0.00 0.00 33.17 4.30
6540 7361 4.972440 CGCCTTATACGTTTGTAGTACCTC 59.028 45.833 0.00 0.00 33.17 3.85
6542 7363 3.487207 GCGCCTTATACGTTTGTAGTACC 59.513 47.826 0.00 0.00 33.17 3.34
6546 7367 4.587211 TTTGCGCCTTATACGTTTGTAG 57.413 40.909 4.18 0.00 33.17 2.74
6547 7368 5.354054 TTTTTGCGCCTTATACGTTTGTA 57.646 34.783 4.18 0.00 34.45 2.41
6570 7391 1.923864 CTTTGCGCCTTGTTCGTTTTT 59.076 42.857 4.18 0.00 0.00 1.94
6571 7392 1.133407 TCTTTGCGCCTTGTTCGTTTT 59.867 42.857 4.18 0.00 0.00 2.43
6572 7393 0.736053 TCTTTGCGCCTTGTTCGTTT 59.264 45.000 4.18 0.00 0.00 3.60
6575 7396 0.516877 TGATCTTTGCGCCTTGTTCG 59.483 50.000 4.18 0.00 0.00 3.95
6595 7430 1.746615 GATGGGCGCTCTTCTTGCA 60.747 57.895 15.51 0.00 0.00 4.08
6603 7438 2.514824 GGGTGAAGATGGGCGCTC 60.515 66.667 7.64 2.47 0.00 5.03
6612 7447 0.536460 GCCGGTTTTCAGGGTGAAGA 60.536 55.000 1.90 0.00 37.70 2.87
6613 7448 0.821711 TGCCGGTTTTCAGGGTGAAG 60.822 55.000 1.90 0.00 37.70 3.02
6678 7515 2.125229 AGCATGCGCCACTGAGAG 60.125 61.111 13.01 0.00 39.83 3.20
6679 7516 2.435410 CAGCATGCGCCACTGAGA 60.435 61.111 13.01 0.00 39.83 3.27
6737 7574 2.401592 CTGTCTCCTCGTCGCTCG 59.598 66.667 0.00 0.00 41.41 5.03
6912 7755 2.105821 AGCAGCTGTAACCACTAACCAA 59.894 45.455 16.64 0.00 0.00 3.67
6913 7756 1.697432 AGCAGCTGTAACCACTAACCA 59.303 47.619 16.64 0.00 0.00 3.67
6914 7757 2.347731 GAGCAGCTGTAACCACTAACC 58.652 52.381 16.64 0.00 0.00 2.85
6915 7758 1.993370 CGAGCAGCTGTAACCACTAAC 59.007 52.381 16.64 0.00 0.00 2.34
6916 7759 1.890489 TCGAGCAGCTGTAACCACTAA 59.110 47.619 16.64 0.00 0.00 2.24
6917 7760 1.472878 CTCGAGCAGCTGTAACCACTA 59.527 52.381 16.64 0.00 0.00 2.74
6918 7761 0.244994 CTCGAGCAGCTGTAACCACT 59.755 55.000 16.64 1.80 0.00 4.00
6919 7762 1.355066 GCTCGAGCAGCTGTAACCAC 61.355 60.000 31.91 0.00 45.83 4.16
6920 7763 1.079819 GCTCGAGCAGCTGTAACCA 60.080 57.895 31.91 0.00 45.83 3.67
6921 7764 3.787458 GCTCGAGCAGCTGTAACC 58.213 61.111 31.91 0.00 45.83 2.85
6956 7799 0.961753 ATCTCGCACACACTCACTCA 59.038 50.000 0.00 0.00 0.00 3.41
6976 7819 1.072159 CCTGATTCCCTCCGGCATC 59.928 63.158 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.