Multiple sequence alignment - TraesCS3D01G251300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G251300 chr3D 100.000 8923 0 0 1 8923 352118379 352109457 0.000000e+00 16478.0
1 TraesCS3D01G251300 chr3D 90.323 62 4 2 7604 7663 451374041 451373980 7.430000e-11 80.5
2 TraesCS3D01G251300 chr3D 86.667 75 4 5 7622 7694 240671608 240671538 2.670000e-10 78.7
3 TraesCS3D01G251300 chr3D 100.000 31 0 0 5212 5242 369416433 369416403 3.480000e-04 58.4
4 TraesCS3D01G251300 chr3B 94.329 3562 110 22 725 4272 450383901 450380418 0.000000e+00 5374.0
5 TraesCS3D01G251300 chr3B 95.285 912 25 9 6810 7704 450377526 450376616 0.000000e+00 1430.0
6 TraesCS3D01G251300 chr3B 98.262 748 9 4 4504 5247 450380184 450379437 0.000000e+00 1306.0
7 TraesCS3D01G251300 chr3B 94.125 834 39 4 7705 8530 450376582 450375751 0.000000e+00 1260.0
8 TraesCS3D01G251300 chr3B 93.590 858 30 7 5977 6813 450378467 450377614 0.000000e+00 1256.0
9 TraesCS3D01G251300 chr3B 90.239 461 30 5 5640 6086 450378922 450378463 9.980000e-164 588.0
10 TraesCS3D01G251300 chr3B 92.929 396 21 3 5248 5641 450379389 450378999 3.610000e-158 569.0
11 TraesCS3D01G251300 chr3B 91.135 282 17 2 8631 8905 450372285 450372005 8.460000e-100 375.0
12 TraesCS3D01G251300 chr3B 88.176 296 23 7 2528 2813 793296340 793296633 8.580000e-90 342.0
13 TraesCS3D01G251300 chr3B 96.154 130 4 1 4297 4426 450380422 450380294 2.520000e-50 211.0
14 TraesCS3D01G251300 chr3B 89.062 64 5 2 7622 7684 312161340 312161278 2.670000e-10 78.7
15 TraesCS3D01G251300 chr3B 84.416 77 5 6 7593 7667 768672119 768672190 1.610000e-07 69.4
16 TraesCS3D01G251300 chr3A 93.147 2977 128 41 630 3572 469842483 469839549 0.000000e+00 4298.0
17 TraesCS3D01G251300 chr3A 91.944 2433 116 29 4425 6813 469838858 469836462 0.000000e+00 3334.0
18 TraesCS3D01G251300 chr3A 91.810 757 53 7 3670 4426 469839554 469838807 0.000000e+00 1046.0
19 TraesCS3D01G251300 chr3A 93.939 561 18 10 7637 8193 469835513 469834965 0.000000e+00 833.0
20 TraesCS3D01G251300 chr3A 91.256 629 23 16 6956 7577 469836199 469835596 0.000000e+00 828.0
21 TraesCS3D01G251300 chr3A 92.937 269 18 1 8599 8867 469833581 469833314 3.020000e-104 390.0
22 TraesCS3D01G251300 chr3A 85.232 237 22 7 478 704 469842672 469842439 1.940000e-56 231.0
23 TraesCS3D01G251300 chr3A 89.691 97 7 2 6810 6903 469836309 469836213 4.380000e-23 121.0
24 TraesCS3D01G251300 chr3A 100.000 31 0 0 5212 5242 490626549 490626519 3.480000e-04 58.4
25 TraesCS3D01G251300 chr4D 86.555 357 39 4 2222 2571 96641631 96641985 1.410000e-102 385.0
26 TraesCS3D01G251300 chr4D 88.571 70 3 3 7604 7669 84987941 84988009 7.430000e-11 80.5
27 TraesCS3D01G251300 chr4D 100.000 28 0 0 5216 5243 43061908 43061881 1.600000e-02 52.8
28 TraesCS3D01G251300 chr4D 100.000 28 0 0 5216 5243 268071260 268071233 1.600000e-02 52.8
29 TraesCS3D01G251300 chr6B 85.405 370 35 11 2222 2575 714958531 714958165 5.090000e-97 366.0
30 TraesCS3D01G251300 chr6B 85.965 228 22 3 1963 2182 714958761 714958536 1.500000e-57 235.0
31 TraesCS3D01G251300 chr6B 92.188 64 4 1 7604 7667 135867642 135867580 1.230000e-13 89.8
32 TraesCS3D01G251300 chr6B 89.041 73 3 4 7600 7670 310357743 310357674 1.600000e-12 86.1
33 TraesCS3D01G251300 chr4B 84.433 379 35 10 1586 1943 488676288 488676663 1.430000e-92 351.0
34 TraesCS3D01G251300 chr1B 88.396 293 25 7 2528 2813 577974926 577974636 2.390000e-90 344.0
35 TraesCS3D01G251300 chr1B 80.531 113 17 4 5975 6085 151084567 151084676 2.060000e-11 82.4
36 TraesCS3D01G251300 chr1B 100.000 30 0 0 5215 5244 336070442 336070471 1.000000e-03 56.5
37 TraesCS3D01G251300 chr6A 83.641 379 38 11 1586 1943 598150305 598149930 1.440000e-87 335.0
38 TraesCS3D01G251300 chr7B 84.270 356 37 10 2222 2575 702683385 702683047 6.680000e-86 329.0
39 TraesCS3D01G251300 chr7B 83.235 340 39 12 2222 2552 364760013 364760343 6.770000e-76 296.0
40 TraesCS3D01G251300 chr7B 86.730 211 27 1 1972 2182 364759799 364760008 5.390000e-57 233.0
41 TraesCS3D01G251300 chr7B 87.879 66 5 3 7604 7667 713303780 713303716 3.460000e-09 75.0
42 TraesCS3D01G251300 chr5D 83.158 380 37 10 1586 1943 386603997 386603623 1.120000e-83 322.0
43 TraesCS3D01G251300 chr5D 82.632 380 40 11 1586 1943 406451476 406451851 6.730000e-81 313.0
44 TraesCS3D01G251300 chr5D 89.140 221 22 2 1962 2182 231639845 231640063 3.170000e-69 274.0
45 TraesCS3D01G251300 chr5D 83.929 56 8 1 7678 7732 527572724 527572669 1.600000e-02 52.8
46 TraesCS3D01G251300 chr5D 83.929 56 8 1 7678 7732 527602287 527602232 1.600000e-02 52.8
47 TraesCS3D01G251300 chr1D 82.940 381 37 14 1586 1943 448384765 448384390 1.450000e-82 318.0
48 TraesCS3D01G251300 chr1D 90.816 98 8 1 2644 2740 4547502 4547405 7.270000e-26 130.0
49 TraesCS3D01G251300 chr2B 87.500 248 25 6 2329 2572 686036165 686036410 1.900000e-71 281.0
50 TraesCS3D01G251300 chr2B 88.953 172 18 1 1970 2141 686004440 686004610 2.520000e-50 211.0
51 TraesCS3D01G251300 chr2B 92.857 98 6 1 2644 2740 73979054 73979151 3.360000e-29 141.0
52 TraesCS3D01G251300 chr2B 83.505 97 16 0 5972 6068 245139504 245139600 3.430000e-14 91.6
53 TraesCS3D01G251300 chr2B 88.333 60 4 2 7678 7734 508960929 508960988 1.610000e-07 69.4
54 TraesCS3D01G251300 chr5B 86.087 115 14 2 5973 6086 664025403 664025290 1.220000e-23 122.0
55 TraesCS3D01G251300 chr5B 90.476 42 4 0 7705 7746 602247081 602247040 1.000000e-03 56.5
56 TraesCS3D01G251300 chr5A 84.211 114 15 1 5973 6086 654621145 654621035 3.410000e-19 108.0
57 TraesCS3D01G251300 chr5A 90.698 43 2 2 7705 7746 526875340 526875299 1.000000e-03 56.5
58 TraesCS3D01G251300 chr7A 83.186 113 19 0 5974 6086 577458997 577459109 4.410000e-18 104.0
59 TraesCS3D01G251300 chr6D 81.481 108 16 2 5979 6084 448904461 448904566 1.600000e-12 86.1
60 TraesCS3D01G251300 chr6D 90.000 50 2 1 7686 7732 13905986 13905937 2.690000e-05 62.1
61 TraesCS3D01G251300 chr4A 89.552 67 3 4 7604 7668 552149466 552149402 2.060000e-11 82.4
62 TraesCS3D01G251300 chr2D 90.323 62 5 1 7604 7664 24981408 24981469 7.430000e-11 80.5
63 TraesCS3D01G251300 chr2A 85.714 56 8 0 7677 7732 209261142 209261087 9.670000e-05 60.2
64 TraesCS3D01G251300 chr7D 83.333 66 6 4 7677 7737 20064756 20064691 1.000000e-03 56.5
65 TraesCS3D01G251300 chrUn 100.000 28 0 0 5216 5243 300901236 300901209 1.600000e-02 52.8
66 TraesCS3D01G251300 chr1A 96.774 31 1 0 5213 5243 307036736 307036766 1.600000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G251300 chr3D 352109457 352118379 8922 True 16478.000000 16478 100.000000 1 8923 1 chr3D.!!$R2 8922
1 TraesCS3D01G251300 chr3B 450372005 450383901 11896 True 1374.333333 5374 94.005333 725 8905 9 chr3B.!!$R2 8180
2 TraesCS3D01G251300 chr3A 469833314 469842672 9358 True 1385.125000 4298 91.244500 478 8867 8 chr3A.!!$R2 8389
3 TraesCS3D01G251300 chr6B 714958165 714958761 596 True 300.500000 366 85.685000 1963 2575 2 chr6B.!!$R3 612
4 TraesCS3D01G251300 chr7B 364759799 364760343 544 False 264.500000 296 84.982500 1972 2552 2 chr7B.!!$F1 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.597568 ACCATGCGGTGAACACAATG 59.402 50.000 7.25 7.22 46.79 2.82 F
1068 1122 0.179073 AATGGAAGTCGCTCATCCCG 60.179 55.000 0.00 0.00 33.43 5.14 F
1270 1324 0.317519 GGGTTTTGCCTTCACGAACG 60.318 55.000 0.00 0.00 37.43 3.95 F
1271 1325 0.379316 GGTTTTGCCTTCACGAACGT 59.621 50.000 0.00 0.00 0.00 3.99 F
1632 1690 1.153289 ATCGGCTCTGTGGTGCATC 60.153 57.895 0.00 0.00 34.07 3.91 F
1637 1695 1.373570 GCTCTGTGGTGCATCCTTAC 58.626 55.000 0.00 0.00 37.07 2.34 F
2237 2305 1.881973 TGTTTCCTGCATGCAGTTCTC 59.118 47.619 38.22 26.71 42.15 2.87 F
2839 2938 2.101582 ACAGAACAGTAGGATCATCGCC 59.898 50.000 0.00 0.00 0.00 5.54 F
4064 4176 0.870393 ACTGCAATGTCAGACGCAAG 59.130 50.000 10.68 1.69 39.54 4.01 F
4844 5070 0.527817 CTCGAGGTGTATTCCACGGC 60.528 60.000 3.91 0.00 45.52 5.68 F
4883 5109 1.003580 GATGTCCAGTTCTGCCCTTCA 59.996 52.381 0.00 0.00 0.00 3.02 F
5442 5727 1.053424 AAGGCGAGTTAAGTGTGGGA 58.947 50.000 0.00 0.00 0.00 4.37 F
7035 7711 2.159099 TGAGATCTTATGCACCCGTGAC 60.159 50.000 0.00 0.00 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1251 1305 0.317519 CGTTCGTGAAGGCAAAACCC 60.318 55.000 0.00 0.00 40.58 4.11 R
2836 2935 0.525668 GACTGTCCGTATGAGTGGCG 60.526 60.000 0.00 0.00 0.00 5.69 R
2839 2938 2.092323 TCTGGACTGTCCGTATGAGTG 58.908 52.381 21.15 4.87 40.17 3.51 R
2906 3005 4.101585 ACCGGAATGCTCAAGAGATTATCA 59.898 41.667 9.46 0.00 0.00 2.15 R
3516 3628 2.299326 AAATCCCTATCCATGCTGCC 57.701 50.000 0.00 0.00 0.00 4.85 R
3517 3629 4.829492 AGTAAAAATCCCTATCCATGCTGC 59.171 41.667 0.00 0.00 0.00 5.25 R
3915 4027 1.180907 TTCAGCAACCACAAACTGCA 58.819 45.000 0.00 0.00 38.58 4.41 R
4299 4411 0.038599 TGGCTCACACATGCTCCAAT 59.961 50.000 0.00 0.00 0.00 3.16 R
5395 5680 2.025699 GGTCAAGGGGGCATGTTTAGTA 60.026 50.000 0.00 0.00 0.00 1.82 R
6529 7039 0.036010 AAGTGAACTCCCATCGCCAG 60.036 55.000 0.00 0.00 0.00 4.85 R
6737 7248 1.618343 ACCATTCAAGAAAAAGCCGGG 59.382 47.619 2.18 0.00 0.00 5.73 R
7109 7787 0.394352 AAGCCCTCATTAAGCCCGTG 60.394 55.000 0.00 0.00 0.00 4.94 R
8495 9959 0.236449 CCCGCTTTGTACCACGAAAC 59.764 55.000 0.00 0.00 0.00 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.918630 GCTATGTGAATTAAATAGGCATTTGAT 57.081 29.630 5.52 1.35 35.88 2.57
42 43 6.652245 GCATTTGATTAATTGCCATGTAAGC 58.348 36.000 5.95 0.00 37.26 3.09
43 44 6.480981 GCATTTGATTAATTGCCATGTAAGCT 59.519 34.615 5.95 0.00 37.26 3.74
44 45 7.306983 GCATTTGATTAATTGCCATGTAAGCTC 60.307 37.037 5.95 0.00 37.26 4.09
45 46 6.772360 TTGATTAATTGCCATGTAAGCTCA 57.228 33.333 0.00 0.00 0.00 4.26
46 47 6.381481 TGATTAATTGCCATGTAAGCTCAG 57.619 37.500 0.00 0.00 0.00 3.35
47 48 5.887598 TGATTAATTGCCATGTAAGCTCAGT 59.112 36.000 0.00 0.00 0.00 3.41
48 49 6.377996 TGATTAATTGCCATGTAAGCTCAGTT 59.622 34.615 0.00 0.00 0.00 3.16
49 50 4.445452 AATTGCCATGTAAGCTCAGTTG 57.555 40.909 0.00 0.00 0.00 3.16
50 51 2.566833 TGCCATGTAAGCTCAGTTGT 57.433 45.000 0.00 0.00 0.00 3.32
51 52 2.153645 TGCCATGTAAGCTCAGTTGTG 58.846 47.619 0.00 0.00 0.00 3.33
52 53 2.224499 TGCCATGTAAGCTCAGTTGTGA 60.224 45.455 0.00 0.00 0.00 3.58
53 54 2.160417 GCCATGTAAGCTCAGTTGTGAC 59.840 50.000 0.00 0.00 0.00 3.67
54 55 2.413112 CCATGTAAGCTCAGTTGTGACG 59.587 50.000 0.00 0.00 0.00 4.35
55 56 3.317150 CATGTAAGCTCAGTTGTGACGA 58.683 45.455 0.00 0.00 0.00 4.20
56 57 3.660501 TGTAAGCTCAGTTGTGACGAT 57.339 42.857 0.00 0.00 0.00 3.73
57 58 3.990092 TGTAAGCTCAGTTGTGACGATT 58.010 40.909 0.00 0.00 0.00 3.34
58 59 4.377021 TGTAAGCTCAGTTGTGACGATTT 58.623 39.130 0.00 0.00 0.00 2.17
59 60 4.814234 TGTAAGCTCAGTTGTGACGATTTT 59.186 37.500 0.00 0.00 0.00 1.82
60 61 4.900635 AAGCTCAGTTGTGACGATTTTT 57.099 36.364 0.00 0.00 0.00 1.94
88 89 4.569279 ACCATGCGGTGAACACAA 57.431 50.000 7.25 0.00 46.79 3.33
89 90 3.034924 ACCATGCGGTGAACACAAT 57.965 47.368 7.25 0.00 46.79 2.71
90 91 0.597568 ACCATGCGGTGAACACAATG 59.402 50.000 7.25 7.22 46.79 2.82
91 92 0.880441 CCATGCGGTGAACACAATGA 59.120 50.000 7.25 0.00 0.00 2.57
92 93 1.269174 CCATGCGGTGAACACAATGAA 59.731 47.619 7.25 0.00 0.00 2.57
93 94 2.587956 CATGCGGTGAACACAATGAAG 58.412 47.619 7.25 0.00 0.00 3.02
94 95 1.960417 TGCGGTGAACACAATGAAGA 58.040 45.000 7.25 0.00 0.00 2.87
95 96 2.293170 TGCGGTGAACACAATGAAGAA 58.707 42.857 7.25 0.00 0.00 2.52
96 97 2.685388 TGCGGTGAACACAATGAAGAAA 59.315 40.909 7.25 0.00 0.00 2.52
97 98 3.042887 GCGGTGAACACAATGAAGAAAC 58.957 45.455 7.25 0.00 0.00 2.78
98 99 3.488384 GCGGTGAACACAATGAAGAAACA 60.488 43.478 7.25 0.00 0.00 2.83
99 100 4.667262 CGGTGAACACAATGAAGAAACAA 58.333 39.130 7.25 0.00 0.00 2.83
100 101 5.098893 CGGTGAACACAATGAAGAAACAAA 58.901 37.500 7.25 0.00 0.00 2.83
101 102 5.574830 CGGTGAACACAATGAAGAAACAAAA 59.425 36.000 7.25 0.00 0.00 2.44
102 103 6.237542 CGGTGAACACAATGAAGAAACAAAAG 60.238 38.462 7.25 0.00 0.00 2.27
103 104 6.035975 GGTGAACACAATGAAGAAACAAAAGG 59.964 38.462 7.25 0.00 0.00 3.11
104 105 6.811170 GTGAACACAATGAAGAAACAAAAGGA 59.189 34.615 0.00 0.00 0.00 3.36
105 106 7.330700 GTGAACACAATGAAGAAACAAAAGGAA 59.669 33.333 0.00 0.00 0.00 3.36
106 107 7.875041 TGAACACAATGAAGAAACAAAAGGAAA 59.125 29.630 0.00 0.00 0.00 3.13
107 108 8.614469 AACACAATGAAGAAACAAAAGGAAAA 57.386 26.923 0.00 0.00 0.00 2.29
108 109 8.028540 ACACAATGAAGAAACAAAAGGAAAAC 57.971 30.769 0.00 0.00 0.00 2.43
109 110 7.659390 ACACAATGAAGAAACAAAAGGAAAACA 59.341 29.630 0.00 0.00 0.00 2.83
110 111 8.667463 CACAATGAAGAAACAAAAGGAAAACAT 58.333 29.630 0.00 0.00 0.00 2.71
111 112 9.230122 ACAATGAAGAAACAAAAGGAAAACATT 57.770 25.926 0.00 0.00 0.00 2.71
131 132 9.793252 AAACATTTATGATGATTACTTCACTGC 57.207 29.630 0.00 0.00 37.11 4.40
132 133 8.510243 ACATTTATGATGATTACTTCACTGCA 57.490 30.769 0.00 0.00 37.11 4.41
133 134 9.128404 ACATTTATGATGATTACTTCACTGCAT 57.872 29.630 0.00 0.00 37.11 3.96
134 135 9.608617 CATTTATGATGATTACTTCACTGCATC 57.391 33.333 0.00 0.00 37.11 3.91
135 136 8.969260 TTTATGATGATTACTTCACTGCATCT 57.031 30.769 0.00 0.00 37.11 2.90
136 137 8.969260 TTATGATGATTACTTCACTGCATCTT 57.031 30.769 0.00 0.00 37.11 2.40
137 138 7.876936 ATGATGATTACTTCACTGCATCTTT 57.123 32.000 0.00 0.00 37.11 2.52
138 139 7.692460 TGATGATTACTTCACTGCATCTTTT 57.308 32.000 0.00 0.00 37.11 2.27
139 140 7.532571 TGATGATTACTTCACTGCATCTTTTG 58.467 34.615 0.00 0.00 37.11 2.44
140 141 6.882610 TGATTACTTCACTGCATCTTTTGT 57.117 33.333 0.00 0.00 0.00 2.83
141 142 7.275888 TGATTACTTCACTGCATCTTTTGTT 57.724 32.000 0.00 0.00 0.00 2.83
142 143 7.715657 TGATTACTTCACTGCATCTTTTGTTT 58.284 30.769 0.00 0.00 0.00 2.83
143 144 8.845227 TGATTACTTCACTGCATCTTTTGTTTA 58.155 29.630 0.00 0.00 0.00 2.01
144 145 9.334693 GATTACTTCACTGCATCTTTTGTTTAG 57.665 33.333 0.00 0.00 0.00 1.85
145 146 6.699575 ACTTCACTGCATCTTTTGTTTAGT 57.300 33.333 0.00 0.00 0.00 2.24
146 147 7.100458 ACTTCACTGCATCTTTTGTTTAGTT 57.900 32.000 0.00 0.00 0.00 2.24
147 148 7.196331 ACTTCACTGCATCTTTTGTTTAGTTC 58.804 34.615 0.00 0.00 0.00 3.01
148 149 6.691754 TCACTGCATCTTTTGTTTAGTTCA 57.308 33.333 0.00 0.00 0.00 3.18
149 150 6.728200 TCACTGCATCTTTTGTTTAGTTCAG 58.272 36.000 0.00 0.00 0.00 3.02
150 151 6.318648 TCACTGCATCTTTTGTTTAGTTCAGT 59.681 34.615 0.00 0.00 0.00 3.41
151 152 7.497579 TCACTGCATCTTTTGTTTAGTTCAGTA 59.502 33.333 0.00 0.00 30.91 2.74
152 153 8.128582 CACTGCATCTTTTGTTTAGTTCAGTAA 58.871 33.333 0.00 0.00 30.91 2.24
153 154 8.850156 ACTGCATCTTTTGTTTAGTTCAGTAAT 58.150 29.630 0.00 0.00 30.38 1.89
169 170 9.847224 AGTTCAGTAATATCATATTTCGGGTTT 57.153 29.630 0.00 0.00 0.00 3.27
195 196 9.491675 TTTTAATTATACGTGTGTCCAGAAAGA 57.508 29.630 0.00 0.00 0.00 2.52
196 197 9.661563 TTTAATTATACGTGTGTCCAGAAAGAT 57.338 29.630 0.00 0.00 0.00 2.40
197 198 7.772332 AATTATACGTGTGTCCAGAAAGATC 57.228 36.000 0.00 0.00 0.00 2.75
198 199 2.457366 ACGTGTGTCCAGAAAGATCC 57.543 50.000 0.00 0.00 0.00 3.36
199 200 1.002087 ACGTGTGTCCAGAAAGATCCC 59.998 52.381 0.00 0.00 0.00 3.85
200 201 1.001974 CGTGTGTCCAGAAAGATCCCA 59.998 52.381 0.00 0.00 0.00 4.37
201 202 2.355108 CGTGTGTCCAGAAAGATCCCAT 60.355 50.000 0.00 0.00 0.00 4.00
202 203 3.118775 CGTGTGTCCAGAAAGATCCCATA 60.119 47.826 0.00 0.00 0.00 2.74
203 204 4.443457 CGTGTGTCCAGAAAGATCCCATAT 60.443 45.833 0.00 0.00 0.00 1.78
204 205 5.440610 GTGTGTCCAGAAAGATCCCATATT 58.559 41.667 0.00 0.00 0.00 1.28
205 206 6.591935 GTGTGTCCAGAAAGATCCCATATTA 58.408 40.000 0.00 0.00 0.00 0.98
206 207 7.054124 GTGTGTCCAGAAAGATCCCATATTAA 58.946 38.462 0.00 0.00 0.00 1.40
207 208 7.556275 GTGTGTCCAGAAAGATCCCATATTAAA 59.444 37.037 0.00 0.00 0.00 1.52
208 209 7.775093 TGTGTCCAGAAAGATCCCATATTAAAG 59.225 37.037 0.00 0.00 0.00 1.85
209 210 7.775561 GTGTCCAGAAAGATCCCATATTAAAGT 59.224 37.037 0.00 0.00 0.00 2.66
210 211 8.336235 TGTCCAGAAAGATCCCATATTAAAGTT 58.664 33.333 0.00 0.00 0.00 2.66
211 212 9.847224 GTCCAGAAAGATCCCATATTAAAGTTA 57.153 33.333 0.00 0.00 0.00 2.24
249 250 7.700022 ATATCATGACTCTGAAGATCGATGA 57.300 36.000 0.54 0.00 0.00 2.92
250 251 5.841957 TCATGACTCTGAAGATCGATGAA 57.158 39.130 0.54 0.00 0.00 2.57
251 252 5.829829 TCATGACTCTGAAGATCGATGAAG 58.170 41.667 0.54 0.00 0.00 3.02
252 253 5.359292 TCATGACTCTGAAGATCGATGAAGT 59.641 40.000 0.54 0.00 0.00 3.01
253 254 5.651387 TGACTCTGAAGATCGATGAAGTT 57.349 39.130 0.54 0.00 0.00 2.66
254 255 6.759497 TGACTCTGAAGATCGATGAAGTTA 57.241 37.500 0.54 0.00 0.00 2.24
255 256 7.340122 TGACTCTGAAGATCGATGAAGTTAT 57.660 36.000 0.54 0.00 0.00 1.89
256 257 8.451908 TGACTCTGAAGATCGATGAAGTTATA 57.548 34.615 0.54 0.00 0.00 0.98
257 258 8.563732 TGACTCTGAAGATCGATGAAGTTATAG 58.436 37.037 0.54 0.00 0.00 1.31
258 259 7.881142 ACTCTGAAGATCGATGAAGTTATAGG 58.119 38.462 0.54 0.00 0.00 2.57
259 260 7.504238 ACTCTGAAGATCGATGAAGTTATAGGT 59.496 37.037 0.54 0.00 0.00 3.08
260 261 8.239038 TCTGAAGATCGATGAAGTTATAGGTT 57.761 34.615 0.54 0.00 0.00 3.50
261 262 8.696374 TCTGAAGATCGATGAAGTTATAGGTTT 58.304 33.333 0.54 0.00 0.00 3.27
262 263 9.319143 CTGAAGATCGATGAAGTTATAGGTTTT 57.681 33.333 0.54 0.00 0.00 2.43
263 264 9.314321 TGAAGATCGATGAAGTTATAGGTTTTC 57.686 33.333 0.54 0.00 0.00 2.29
264 265 9.535878 GAAGATCGATGAAGTTATAGGTTTTCT 57.464 33.333 0.54 0.00 0.00 2.52
265 266 9.892130 AAGATCGATGAAGTTATAGGTTTTCTT 57.108 29.630 0.54 0.00 0.00 2.52
266 267 9.319143 AGATCGATGAAGTTATAGGTTTTCTTG 57.681 33.333 0.54 0.00 0.00 3.02
267 268 9.314321 GATCGATGAAGTTATAGGTTTTCTTGA 57.686 33.333 0.54 0.00 0.00 3.02
268 269 8.475331 TCGATGAAGTTATAGGTTTTCTTGAC 57.525 34.615 0.00 0.00 0.00 3.18
269 270 7.548075 TCGATGAAGTTATAGGTTTTCTTGACC 59.452 37.037 0.00 0.00 37.44 4.02
279 280 5.077564 AGGTTTTCTTGACCTAATTCCACC 58.922 41.667 0.00 0.00 45.50 4.61
280 281 4.830600 GGTTTTCTTGACCTAATTCCACCA 59.169 41.667 0.00 0.00 34.27 4.17
281 282 5.278808 GGTTTTCTTGACCTAATTCCACCAC 60.279 44.000 0.00 0.00 34.27 4.16
282 283 4.715534 TTCTTGACCTAATTCCACCACA 57.284 40.909 0.00 0.00 0.00 4.17
283 284 4.015872 TCTTGACCTAATTCCACCACAC 57.984 45.455 0.00 0.00 0.00 3.82
284 285 3.650942 TCTTGACCTAATTCCACCACACT 59.349 43.478 0.00 0.00 0.00 3.55
285 286 3.417069 TGACCTAATTCCACCACACTG 57.583 47.619 0.00 0.00 0.00 3.66
286 287 2.084546 GACCTAATTCCACCACACTGC 58.915 52.381 0.00 0.00 0.00 4.40
287 288 1.705186 ACCTAATTCCACCACACTGCT 59.295 47.619 0.00 0.00 0.00 4.24
288 289 2.910319 ACCTAATTCCACCACACTGCTA 59.090 45.455 0.00 0.00 0.00 3.49
289 290 3.329520 ACCTAATTCCACCACACTGCTAA 59.670 43.478 0.00 0.00 0.00 3.09
290 291 3.689649 CCTAATTCCACCACACTGCTAAC 59.310 47.826 0.00 0.00 0.00 2.34
291 292 3.508845 AATTCCACCACACTGCTAACT 57.491 42.857 0.00 0.00 0.00 2.24
292 293 2.254546 TTCCACCACACTGCTAACTG 57.745 50.000 0.00 0.00 0.00 3.16
293 294 1.128200 TCCACCACACTGCTAACTGT 58.872 50.000 0.00 0.00 0.00 3.55
294 295 1.488812 TCCACCACACTGCTAACTGTT 59.511 47.619 0.00 0.00 0.00 3.16
295 296 2.092646 TCCACCACACTGCTAACTGTTT 60.093 45.455 0.00 0.00 0.00 2.83
296 297 2.033299 CCACCACACTGCTAACTGTTTG 59.967 50.000 0.00 0.00 0.00 2.93
297 298 2.033299 CACCACACTGCTAACTGTTTGG 59.967 50.000 0.00 6.75 45.88 3.28
298 299 2.297701 CCACACTGCTAACTGTTTGGT 58.702 47.619 0.00 0.00 39.47 3.67
299 300 2.033299 CCACACTGCTAACTGTTTGGTG 59.967 50.000 0.00 4.33 39.47 4.17
300 301 1.676006 ACACTGCTAACTGTTTGGTGC 59.324 47.619 0.00 0.00 0.00 5.01
301 302 1.675483 CACTGCTAACTGTTTGGTGCA 59.325 47.619 0.00 4.46 0.00 4.57
302 303 2.294233 CACTGCTAACTGTTTGGTGCAT 59.706 45.455 0.00 0.00 0.00 3.96
303 304 2.958355 ACTGCTAACTGTTTGGTGCATT 59.042 40.909 0.00 0.00 0.00 3.56
304 305 4.023279 CACTGCTAACTGTTTGGTGCATTA 60.023 41.667 0.00 0.00 0.00 1.90
305 306 4.582656 ACTGCTAACTGTTTGGTGCATTAA 59.417 37.500 0.00 0.00 0.00 1.40
306 307 4.865776 TGCTAACTGTTTGGTGCATTAAC 58.134 39.130 0.00 0.00 0.00 2.01
307 308 4.339530 TGCTAACTGTTTGGTGCATTAACA 59.660 37.500 0.00 9.80 0.00 2.41
308 309 5.010516 TGCTAACTGTTTGGTGCATTAACAT 59.989 36.000 0.00 2.40 31.96 2.71
309 310 5.345741 GCTAACTGTTTGGTGCATTAACATG 59.654 40.000 0.00 0.00 31.96 3.21
348 349 7.770801 TCCAATAAAATCACTAGACATGTCG 57.229 36.000 19.85 9.54 34.09 4.35
349 350 7.327975 TCCAATAAAATCACTAGACATGTCGT 58.672 34.615 19.85 10.20 34.09 4.34
350 351 7.822334 TCCAATAAAATCACTAGACATGTCGTT 59.178 33.333 19.85 6.52 34.09 3.85
351 352 8.116753 CCAATAAAATCACTAGACATGTCGTTC 58.883 37.037 19.85 0.00 34.09 3.95
352 353 8.873830 CAATAAAATCACTAGACATGTCGTTCT 58.126 33.333 19.85 5.40 34.09 3.01
354 355 9.737427 ATAAAATCACTAGACATGTCGTTCTAG 57.263 33.333 19.85 17.02 38.40 2.43
355 356 5.759506 ATCACTAGACATGTCGTTCTAGG 57.240 43.478 19.85 9.99 37.18 3.02
356 357 4.586884 TCACTAGACATGTCGTTCTAGGT 58.413 43.478 19.85 9.23 37.18 3.08
357 358 5.737860 TCACTAGACATGTCGTTCTAGGTA 58.262 41.667 19.85 3.84 37.18 3.08
358 359 6.354938 TCACTAGACATGTCGTTCTAGGTAT 58.645 40.000 19.85 1.32 37.18 2.73
359 360 7.503549 TCACTAGACATGTCGTTCTAGGTATA 58.496 38.462 19.85 2.46 37.18 1.47
360 361 7.440556 TCACTAGACATGTCGTTCTAGGTATAC 59.559 40.741 19.85 0.00 37.18 1.47
361 362 7.441760 CACTAGACATGTCGTTCTAGGTATACT 59.558 40.741 19.85 0.16 37.18 2.12
362 363 7.992033 ACTAGACATGTCGTTCTAGGTATACTT 59.008 37.037 19.85 0.00 37.18 2.24
363 364 7.261829 AGACATGTCGTTCTAGGTATACTTC 57.738 40.000 19.85 0.00 34.09 3.01
364 365 6.827251 AGACATGTCGTTCTAGGTATACTTCA 59.173 38.462 19.85 0.00 34.09 3.02
365 366 7.502895 AGACATGTCGTTCTAGGTATACTTCAT 59.497 37.037 19.85 0.00 34.09 2.57
366 367 8.687292 ACATGTCGTTCTAGGTATACTTCATA 57.313 34.615 2.25 0.00 0.00 2.15
367 368 9.298250 ACATGTCGTTCTAGGTATACTTCATAT 57.702 33.333 2.25 0.00 0.00 1.78
370 371 8.080417 TGTCGTTCTAGGTATACTTCATATTGC 58.920 37.037 2.25 0.00 0.00 3.56
371 372 8.298140 GTCGTTCTAGGTATACTTCATATTGCT 58.702 37.037 2.25 0.00 0.00 3.91
372 373 8.857098 TCGTTCTAGGTATACTTCATATTGCTT 58.143 33.333 2.25 0.00 0.00 3.91
373 374 9.477484 CGTTCTAGGTATACTTCATATTGCTTT 57.523 33.333 2.25 0.00 0.00 3.51
397 398 7.800015 TTTTCTTCTTTTGTGTACCGTTTTC 57.200 32.000 0.00 0.00 0.00 2.29
398 399 6.746745 TTCTTCTTTTGTGTACCGTTTTCT 57.253 33.333 0.00 0.00 0.00 2.52
399 400 6.746745 TCTTCTTTTGTGTACCGTTTTCTT 57.253 33.333 0.00 0.00 0.00 2.52
400 401 7.148355 TCTTCTTTTGTGTACCGTTTTCTTT 57.852 32.000 0.00 0.00 0.00 2.52
401 402 7.595604 TCTTCTTTTGTGTACCGTTTTCTTTT 58.404 30.769 0.00 0.00 0.00 2.27
402 403 7.751793 TCTTCTTTTGTGTACCGTTTTCTTTTC 59.248 33.333 0.00 0.00 0.00 2.29
403 404 6.324042 TCTTTTGTGTACCGTTTTCTTTTCC 58.676 36.000 0.00 0.00 0.00 3.13
404 405 4.635833 TTGTGTACCGTTTTCTTTTCCC 57.364 40.909 0.00 0.00 0.00 3.97
405 406 2.613133 TGTGTACCGTTTTCTTTTCCCG 59.387 45.455 0.00 0.00 0.00 5.14
406 407 1.603326 TGTACCGTTTTCTTTTCCCGC 59.397 47.619 0.00 0.00 0.00 6.13
407 408 1.875514 GTACCGTTTTCTTTTCCCGCT 59.124 47.619 0.00 0.00 0.00 5.52
408 409 1.395635 ACCGTTTTCTTTTCCCGCTT 58.604 45.000 0.00 0.00 0.00 4.68
409 410 1.752498 ACCGTTTTCTTTTCCCGCTTT 59.248 42.857 0.00 0.00 0.00 3.51
410 411 2.166870 ACCGTTTTCTTTTCCCGCTTTT 59.833 40.909 0.00 0.00 0.00 2.27
411 412 3.380954 ACCGTTTTCTTTTCCCGCTTTTA 59.619 39.130 0.00 0.00 0.00 1.52
412 413 4.038282 ACCGTTTTCTTTTCCCGCTTTTAT 59.962 37.500 0.00 0.00 0.00 1.40
413 414 4.619760 CCGTTTTCTTTTCCCGCTTTTATC 59.380 41.667 0.00 0.00 0.00 1.75
414 415 5.458015 CGTTTTCTTTTCCCGCTTTTATCT 58.542 37.500 0.00 0.00 0.00 1.98
415 416 5.342259 CGTTTTCTTTTCCCGCTTTTATCTG 59.658 40.000 0.00 0.00 0.00 2.90
416 417 6.213677 GTTTTCTTTTCCCGCTTTTATCTGT 58.786 36.000 0.00 0.00 0.00 3.41
417 418 7.364970 GTTTTCTTTTCCCGCTTTTATCTGTA 58.635 34.615 0.00 0.00 0.00 2.74
418 419 7.696992 TTTCTTTTCCCGCTTTTATCTGTAT 57.303 32.000 0.00 0.00 0.00 2.29
419 420 7.696992 TTCTTTTCCCGCTTTTATCTGTATT 57.303 32.000 0.00 0.00 0.00 1.89
420 421 7.696992 TCTTTTCCCGCTTTTATCTGTATTT 57.303 32.000 0.00 0.00 0.00 1.40
421 422 8.117813 TCTTTTCCCGCTTTTATCTGTATTTT 57.882 30.769 0.00 0.00 0.00 1.82
422 423 8.581578 TCTTTTCCCGCTTTTATCTGTATTTTT 58.418 29.630 0.00 0.00 0.00 1.94
423 424 9.849166 CTTTTCCCGCTTTTATCTGTATTTTTA 57.151 29.630 0.00 0.00 0.00 1.52
424 425 9.628746 TTTTCCCGCTTTTATCTGTATTTTTAC 57.371 29.630 0.00 0.00 0.00 2.01
425 426 7.925043 TCCCGCTTTTATCTGTATTTTTACA 57.075 32.000 0.00 0.00 0.00 2.41
426 427 8.338072 TCCCGCTTTTATCTGTATTTTTACAA 57.662 30.769 0.00 0.00 0.00 2.41
427 428 8.962679 TCCCGCTTTTATCTGTATTTTTACAAT 58.037 29.630 0.00 0.00 0.00 2.71
428 429 9.233232 CCCGCTTTTATCTGTATTTTTACAATC 57.767 33.333 0.00 0.00 0.00 2.67
429 430 9.781834 CCGCTTTTATCTGTATTTTTACAATCA 57.218 29.630 0.00 0.00 0.00 2.57
464 465 9.013229 TCAATATCTCACATTTAAGTTTGCTGT 57.987 29.630 0.00 0.00 0.00 4.40
465 466 9.630098 CAATATCTCACATTTAAGTTTGCTGTT 57.370 29.630 0.00 0.00 0.00 3.16
467 468 9.846248 ATATCTCACATTTAAGTTTGCTGTTTC 57.154 29.630 0.00 0.00 0.00 2.78
468 469 7.094508 TCTCACATTTAAGTTTGCTGTTTCA 57.905 32.000 0.00 0.00 0.00 2.69
469 470 7.715657 TCTCACATTTAAGTTTGCTGTTTCAT 58.284 30.769 0.00 0.00 0.00 2.57
470 471 7.648908 TCTCACATTTAAGTTTGCTGTTTCATG 59.351 33.333 0.00 0.00 0.00 3.07
471 472 6.700960 TCACATTTAAGTTTGCTGTTTCATGG 59.299 34.615 0.00 0.00 0.00 3.66
472 473 5.466393 ACATTTAAGTTTGCTGTTTCATGGC 59.534 36.000 0.00 0.00 0.00 4.40
473 474 4.662468 TTAAGTTTGCTGTTTCATGGCA 57.338 36.364 0.00 0.00 0.00 4.92
474 475 3.540314 AAGTTTGCTGTTTCATGGCAA 57.460 38.095 2.64 2.64 42.97 4.52
475 476 2.825205 AGTTTGCTGTTTCATGGCAAC 58.175 42.857 5.90 4.19 44.08 4.17
579 583 8.587952 AGGAATAACAAATTTCCTCAAAAACG 57.412 30.769 0.00 0.00 47.00 3.60
600 604 8.647143 AAACGAAAAATCATCAAATGAGTGTT 57.353 26.923 0.00 0.00 43.53 3.32
780 834 2.030958 GTACCCACGAGCCCAAACG 61.031 63.158 0.00 0.00 0.00 3.60
783 837 3.726517 CCACGAGCCCAAACGCAG 61.727 66.667 0.00 0.00 0.00 5.18
862 916 4.753662 TACTCCTCCGCGCCTGGT 62.754 66.667 0.00 0.00 0.00 4.00
915 969 2.049185 TCCAGACTCCAGAGAGCGC 61.049 63.158 0.00 0.00 44.65 5.92
958 1012 3.051803 AGAGGGAGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
959 1013 3.312890 AGGGAGAGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
960 1014 2.370189 GGGAGAGAGAGAGAGAGAGAGG 59.630 59.091 0.00 0.00 0.00 3.69
961 1015 2.224402 GGAGAGAGAGAGAGAGAGAGGC 60.224 59.091 0.00 0.00 0.00 4.70
1017 1071 0.260230 AGATGAAGGAGAGAGGCGGA 59.740 55.000 0.00 0.00 0.00 5.54
1068 1122 0.179073 AATGGAAGTCGCTCATCCCG 60.179 55.000 0.00 0.00 33.43 5.14
1253 1307 2.380102 CGTCACGAACGTATCTAGGG 57.620 55.000 0.00 0.00 46.42 3.53
1254 1308 1.667724 CGTCACGAACGTATCTAGGGT 59.332 52.381 0.00 0.00 46.42 4.34
1255 1309 2.096496 CGTCACGAACGTATCTAGGGTT 59.904 50.000 0.00 0.00 46.42 4.11
1256 1310 3.426695 CGTCACGAACGTATCTAGGGTTT 60.427 47.826 0.00 0.00 46.42 3.27
1257 1311 4.488879 GTCACGAACGTATCTAGGGTTTT 58.511 43.478 0.00 0.00 0.00 2.43
1258 1312 4.325472 GTCACGAACGTATCTAGGGTTTTG 59.675 45.833 0.00 0.00 0.00 2.44
1259 1313 3.061697 CACGAACGTATCTAGGGTTTTGC 59.938 47.826 0.00 0.00 0.00 3.68
1260 1314 2.606272 CGAACGTATCTAGGGTTTTGCC 59.394 50.000 0.00 0.00 0.00 4.52
1261 1315 3.677976 CGAACGTATCTAGGGTTTTGCCT 60.678 47.826 0.00 0.00 37.43 4.75
1262 1316 3.994931 ACGTATCTAGGGTTTTGCCTT 57.005 42.857 0.00 0.00 37.43 4.35
1263 1317 3.870274 ACGTATCTAGGGTTTTGCCTTC 58.130 45.455 0.00 0.00 37.43 3.46
1264 1318 3.262405 ACGTATCTAGGGTTTTGCCTTCA 59.738 43.478 0.00 0.00 37.43 3.02
1265 1319 3.621715 CGTATCTAGGGTTTTGCCTTCAC 59.378 47.826 0.00 0.00 37.43 3.18
1266 1320 2.178912 TCTAGGGTTTTGCCTTCACG 57.821 50.000 0.00 0.00 37.43 4.35
1267 1321 1.695242 TCTAGGGTTTTGCCTTCACGA 59.305 47.619 0.00 0.00 37.43 4.35
1268 1322 2.105134 TCTAGGGTTTTGCCTTCACGAA 59.895 45.455 0.00 0.00 37.43 3.85
1269 1323 1.029681 AGGGTTTTGCCTTCACGAAC 58.970 50.000 0.00 0.00 37.43 3.95
1270 1324 0.317519 GGGTTTTGCCTTCACGAACG 60.318 55.000 0.00 0.00 37.43 3.95
1271 1325 0.379316 GGTTTTGCCTTCACGAACGT 59.621 50.000 0.00 0.00 0.00 3.99
1272 1326 1.598601 GGTTTTGCCTTCACGAACGTA 59.401 47.619 0.00 0.00 0.00 3.57
1273 1327 2.224784 GGTTTTGCCTTCACGAACGTAT 59.775 45.455 0.00 0.00 0.00 3.06
1287 1341 3.677976 CGAACGTATCTAGGGTTTTGCCT 60.678 47.826 0.00 0.00 37.43 4.75
1288 1342 3.994931 ACGTATCTAGGGTTTTGCCTT 57.005 42.857 0.00 0.00 37.43 4.35
1359 1413 1.153745 GTCTCCAGATCTGCGCGTT 60.154 57.895 17.76 0.00 0.00 4.84
1559 1617 6.302313 GTGTCGACCGTTTTATCTTTTCAATG 59.698 38.462 14.12 0.00 0.00 2.82
1632 1690 1.153289 ATCGGCTCTGTGGTGCATC 60.153 57.895 0.00 0.00 34.07 3.91
1637 1695 1.373570 GCTCTGTGGTGCATCCTTAC 58.626 55.000 0.00 0.00 37.07 2.34
1666 1724 6.093633 CCACCTGGTACTTTGAAGCTAATAAC 59.906 42.308 0.00 0.00 0.00 1.89
1669 1727 7.888546 ACCTGGTACTTTGAAGCTAATAACATT 59.111 33.333 0.00 0.00 0.00 2.71
1670 1728 8.184192 CCTGGTACTTTGAAGCTAATAACATTG 58.816 37.037 0.00 0.00 0.00 2.82
1703 1761 3.508762 CATTCTGTTTGGAAGCATGCTC 58.491 45.455 22.93 14.19 0.00 4.26
1730 1788 1.919918 TTTGCAGCGTTTTTGACCTG 58.080 45.000 0.00 0.00 32.78 4.00
1746 1804 3.650942 TGACCTGAAATAGTGGGTTCTGT 59.349 43.478 0.00 0.00 31.60 3.41
1871 1929 2.106684 AGGTGACCTTCAAAAGTCCTCC 59.893 50.000 0.00 0.00 0.00 4.30
1907 1965 6.913170 TCCACAAACAGATTTTTAGCATCTC 58.087 36.000 0.00 0.00 0.00 2.75
2021 2079 3.591527 AGATGGAAGTGTCCCAAATACCA 59.408 43.478 0.00 0.00 44.23 3.25
2237 2305 1.881973 TGTTTCCTGCATGCAGTTCTC 59.118 47.619 38.22 26.71 42.15 2.87
2276 2358 5.997746 GCCAGTTTCTTATGCCTGTATATGA 59.002 40.000 0.00 0.00 0.00 2.15
2277 2359 6.656693 GCCAGTTTCTTATGCCTGTATATGAT 59.343 38.462 0.00 0.00 0.00 2.45
2278 2360 7.175641 GCCAGTTTCTTATGCCTGTATATGATT 59.824 37.037 0.00 0.00 0.00 2.57
2279 2361 8.509690 CCAGTTTCTTATGCCTGTATATGATTG 58.490 37.037 0.00 0.00 0.00 2.67
2280 2362 9.060347 CAGTTTCTTATGCCTGTATATGATTGT 57.940 33.333 0.00 0.00 0.00 2.71
2338 2427 6.658816 TGTGGAGTATTCTTGCATTAACATGT 59.341 34.615 0.00 0.00 32.28 3.21
2703 2801 5.043248 GTGTTCTTGTGTTTAGCTTGCATT 58.957 37.500 0.00 0.00 0.00 3.56
2728 2827 5.126061 CCTAGCAGTTTACTTTTCATGCCAT 59.874 40.000 0.00 0.00 34.24 4.40
2836 2935 5.344743 TTCCACAGAACAGTAGGATCATC 57.655 43.478 0.00 0.00 0.00 2.92
2839 2938 2.101582 ACAGAACAGTAGGATCATCGCC 59.898 50.000 0.00 0.00 0.00 5.54
2906 3005 6.017109 TGCTGCTTAATTCTTTCGAAAGAGTT 60.017 34.615 35.67 35.67 45.01 3.01
3062 3161 7.443575 CCCTGATTTGGTATGTTCTCTTATCTG 59.556 40.741 0.00 0.00 0.00 2.90
3111 3210 6.152932 AGATGTTGAAAGTTGCATTTCTGT 57.847 33.333 12.67 0.00 39.45 3.41
3253 3357 7.776618 TCTGAAAAGTTCTAGTAGGATGTCA 57.223 36.000 0.00 0.00 0.00 3.58
3590 3702 5.597813 TTTTCAGAACTCTCGCTGATTTC 57.402 39.130 0.00 1.98 40.51 2.17
3602 3714 3.932710 TCGCTGATTTCGAGTTTGCTATT 59.067 39.130 0.00 0.00 0.00 1.73
3604 3716 4.201714 CGCTGATTTCGAGTTTGCTATTCA 60.202 41.667 0.00 0.00 0.00 2.57
3653 3765 7.391833 CCAGCTCCTCAGTAACTATTTTTCTTT 59.608 37.037 0.00 0.00 0.00 2.52
3747 3859 8.854614 ATATTTTCCCTTCATACATAGTGCTC 57.145 34.615 0.00 0.00 0.00 4.26
3753 3865 5.509840 CCCTTCATACATAGTGCTCACTACC 60.510 48.000 11.50 0.00 45.61 3.18
3982 4094 6.604795 AGAAATAACTGCAATAGCTGGAACAT 59.395 34.615 0.00 0.00 43.24 2.71
4012 4124 2.100087 ACCAAACGGTAAAACAGGCAAG 59.900 45.455 0.00 0.00 33.92 4.01
4063 4175 2.068519 CTACTGCAATGTCAGACGCAA 58.931 47.619 10.68 0.00 37.51 4.85
4064 4176 0.870393 ACTGCAATGTCAGACGCAAG 59.130 50.000 10.68 1.69 39.54 4.01
4086 4198 4.472833 AGCTAAATGTGTCTCTTCCAGGAT 59.527 41.667 0.00 0.00 0.00 3.24
4225 4337 7.027760 TCTGACTTGATATCACAGTTTACGTC 58.972 38.462 16.97 9.55 0.00 4.34
4271 4383 4.213270 CACGATTGTGTTACTTGTGTCCAT 59.787 41.667 4.78 0.00 41.34 3.41
4272 4384 4.213270 ACGATTGTGTTACTTGTGTCCATG 59.787 41.667 0.00 0.00 0.00 3.66
4273 4385 4.450757 CGATTGTGTTACTTGTGTCCATGA 59.549 41.667 0.00 0.00 0.00 3.07
4274 4386 5.049749 CGATTGTGTTACTTGTGTCCATGAA 60.050 40.000 0.00 0.00 0.00 2.57
4275 4387 5.493133 TTGTGTTACTTGTGTCCATGAAC 57.507 39.130 0.00 0.00 0.00 3.18
4276 4388 3.880490 TGTGTTACTTGTGTCCATGAACC 59.120 43.478 0.00 0.00 0.00 3.62
4277 4389 4.134563 GTGTTACTTGTGTCCATGAACCT 58.865 43.478 0.00 0.00 0.00 3.50
4278 4390 4.213482 GTGTTACTTGTGTCCATGAACCTC 59.787 45.833 0.00 0.00 0.00 3.85
4279 4391 4.141597 TGTTACTTGTGTCCATGAACCTCA 60.142 41.667 0.00 0.00 0.00 3.86
4280 4392 3.131709 ACTTGTGTCCATGAACCTCAG 57.868 47.619 0.00 0.00 0.00 3.35
4281 4393 2.705658 ACTTGTGTCCATGAACCTCAGA 59.294 45.455 0.00 0.00 0.00 3.27
4282 4394 3.136443 ACTTGTGTCCATGAACCTCAGAA 59.864 43.478 0.00 0.00 0.00 3.02
4283 4395 3.126001 TGTGTCCATGAACCTCAGAAC 57.874 47.619 0.00 0.00 0.00 3.01
4284 4396 2.069273 GTGTCCATGAACCTCAGAACG 58.931 52.381 0.00 0.00 0.00 3.95
4285 4397 1.001974 TGTCCATGAACCTCAGAACGG 59.998 52.381 0.00 0.00 0.00 4.44
4286 4398 1.275291 GTCCATGAACCTCAGAACGGA 59.725 52.381 0.00 0.00 0.00 4.69
4287 4399 1.974957 TCCATGAACCTCAGAACGGAA 59.025 47.619 0.00 0.00 0.00 4.30
4288 4400 2.076863 CCATGAACCTCAGAACGGAAC 58.923 52.381 0.00 0.00 0.00 3.62
4289 4401 2.289694 CCATGAACCTCAGAACGGAACT 60.290 50.000 0.00 0.00 0.00 3.01
4290 4402 3.403038 CATGAACCTCAGAACGGAACTT 58.597 45.455 0.00 0.00 0.00 2.66
4291 4403 3.107642 TGAACCTCAGAACGGAACTTC 57.892 47.619 0.00 0.00 0.00 3.01
4292 4404 2.224209 TGAACCTCAGAACGGAACTTCC 60.224 50.000 0.00 0.00 0.00 3.46
4380 4521 4.155826 GGCATGACAGCACTAACACATAAA 59.844 41.667 0.00 0.00 35.83 1.40
4422 4563 9.696917 AAAAATTAGAACTAATCACCAAAGCTG 57.303 29.630 7.41 0.00 34.90 4.24
4423 4564 5.880054 TTAGAACTAATCACCAAAGCTGC 57.120 39.130 0.00 0.00 0.00 5.25
4424 4565 3.084786 AGAACTAATCACCAAAGCTGCC 58.915 45.455 0.00 0.00 0.00 4.85
4425 4566 2.584835 ACTAATCACCAAAGCTGCCA 57.415 45.000 0.00 0.00 0.00 4.92
4426 4567 2.162681 ACTAATCACCAAAGCTGCCAC 58.837 47.619 0.00 0.00 0.00 5.01
4427 4568 2.161855 CTAATCACCAAAGCTGCCACA 58.838 47.619 0.00 0.00 0.00 4.17
4428 4569 1.636148 AATCACCAAAGCTGCCACAT 58.364 45.000 0.00 0.00 0.00 3.21
4429 4570 2.512692 ATCACCAAAGCTGCCACATA 57.487 45.000 0.00 0.00 0.00 2.29
4430 4571 2.284754 TCACCAAAGCTGCCACATAA 57.715 45.000 0.00 0.00 0.00 1.90
4431 4572 2.591923 TCACCAAAGCTGCCACATAAA 58.408 42.857 0.00 0.00 0.00 1.40
4432 4573 2.557924 TCACCAAAGCTGCCACATAAAG 59.442 45.455 0.00 0.00 0.00 1.85
4433 4574 1.273327 ACCAAAGCTGCCACATAAAGC 59.727 47.619 0.00 0.00 37.20 3.51
4434 4575 1.273048 CCAAAGCTGCCACATAAAGCA 59.727 47.619 0.00 0.00 39.47 3.91
4435 4576 2.288948 CCAAAGCTGCCACATAAAGCAA 60.289 45.455 0.00 0.00 38.82 3.91
4436 4577 3.391965 CAAAGCTGCCACATAAAGCAAA 58.608 40.909 0.00 0.00 38.82 3.68
4437 4578 3.749665 AAGCTGCCACATAAAGCAAAA 57.250 38.095 0.00 0.00 38.82 2.44
4438 4579 3.749665 AGCTGCCACATAAAGCAAAAA 57.250 38.095 0.00 0.00 38.82 1.94
4439 4580 4.276058 AGCTGCCACATAAAGCAAAAAT 57.724 36.364 0.00 0.00 38.82 1.82
4440 4581 3.998341 AGCTGCCACATAAAGCAAAAATG 59.002 39.130 0.00 0.00 38.82 2.32
4441 4582 3.995705 GCTGCCACATAAAGCAAAAATGA 59.004 39.130 0.00 0.00 38.82 2.57
4442 4583 4.451774 GCTGCCACATAAAGCAAAAATGAA 59.548 37.500 0.00 0.00 38.82 2.57
4443 4584 5.390145 GCTGCCACATAAAGCAAAAATGAAG 60.390 40.000 0.00 0.00 38.82 3.02
4444 4585 5.851720 TGCCACATAAAGCAAAAATGAAGA 58.148 33.333 0.00 0.00 35.69 2.87
4445 4586 6.286758 TGCCACATAAAGCAAAAATGAAGAA 58.713 32.000 0.00 0.00 35.69 2.52
4446 4587 6.765036 TGCCACATAAAGCAAAAATGAAGAAA 59.235 30.769 0.00 0.00 35.69 2.52
4447 4588 7.281774 TGCCACATAAAGCAAAAATGAAGAAAA 59.718 29.630 0.00 0.00 35.69 2.29
4448 4589 8.127954 GCCACATAAAGCAAAAATGAAGAAAAA 58.872 29.630 0.00 0.00 0.00 1.94
4497 4638 4.577693 CCAATGTGATAACTGGACCATCTG 59.422 45.833 0.00 0.00 0.00 2.90
4682 4908 7.095910 TGTTCACATGCAAAATGTAAATAGGG 58.904 34.615 0.00 0.00 0.00 3.53
4844 5070 0.527817 CTCGAGGTGTATTCCACGGC 60.528 60.000 3.91 0.00 45.52 5.68
4883 5109 1.003580 GATGTCCAGTTCTGCCCTTCA 59.996 52.381 0.00 0.00 0.00 3.02
5020 5248 7.356540 TGTTTGTACGTTTGATCTTTATGGTG 58.643 34.615 0.00 0.00 0.00 4.17
5110 5338 2.504519 GATGCCCGGACTGGTACC 59.495 66.667 0.73 4.43 35.15 3.34
5151 5379 7.147983 GGTGACACTCTTCTCTATCTTATGTGT 60.148 40.741 5.39 0.00 38.57 3.72
5152 5380 8.894731 GTGACACTCTTCTCTATCTTATGTGTA 58.105 37.037 0.00 0.00 36.45 2.90
5394 5679 2.032681 GCTCTTTGGTGCCGAGGT 59.967 61.111 0.00 0.00 0.00 3.85
5395 5680 1.600916 GCTCTTTGGTGCCGAGGTT 60.601 57.895 0.00 0.00 0.00 3.50
5442 5727 1.053424 AAGGCGAGTTAAGTGTGGGA 58.947 50.000 0.00 0.00 0.00 4.37
5447 5732 2.288886 GCGAGTTAAGTGTGGGAAGAGT 60.289 50.000 0.00 0.00 0.00 3.24
5487 5772 7.199541 AGTCACATGAGCTTGATATATTTGC 57.800 36.000 0.00 0.00 0.00 3.68
5525 5811 6.042143 TCTTTTGTTGTTTCATTCTGCTTCC 58.958 36.000 0.00 0.00 0.00 3.46
5583 5869 5.182487 ACATACATTATCTGCGGTTGAACA 58.818 37.500 0.00 0.00 0.00 3.18
5958 6333 6.567959 TCTATGTTTGTCAATTGTTTGCACA 58.432 32.000 5.13 0.00 32.61 4.57
5990 6480 5.075493 TCCATATTTAGTACTCCCTCCGAC 58.925 45.833 0.00 0.00 0.00 4.79
6014 6504 6.826741 ACCCATATTACTTGTCGCTAAAACAT 59.173 34.615 0.00 0.00 0.00 2.71
6063 6553 9.716531 TCTAGATACATCCATTTCAGCAATAAG 57.283 33.333 0.00 0.00 0.00 1.73
6310 6801 5.163322 TGCTGGTTCTCCAATTCACAAATTT 60.163 36.000 0.00 0.00 43.81 1.82
6351 6842 3.568007 GTCCTTTGTGTTCAGGCATGTAA 59.432 43.478 0.00 0.00 0.00 2.41
6370 6861 2.452600 AAGAGAACCTTTTGGCCACA 57.547 45.000 3.88 0.00 45.59 4.17
6374 6865 3.074538 AGAGAACCTTTTGGCCACATACT 59.925 43.478 3.88 0.00 45.59 2.12
6413 6904 6.119536 GGATATGGACATTTGGTTACTGTCA 58.880 40.000 5.15 0.00 40.80 3.58
6414 6905 6.260936 GGATATGGACATTTGGTTACTGTCAG 59.739 42.308 0.00 0.00 40.80 3.51
6525 7035 4.347876 TGTGGGACCATGAGAAGGTATATG 59.652 45.833 0.00 0.00 40.09 1.78
6529 7039 2.289694 ACCATGAGAAGGTATATGCCGC 60.290 50.000 3.99 1.14 37.67 6.53
6731 7242 9.952030 TTACTTCTTCATGTGGTATATGAAACA 57.048 29.630 0.00 0.00 42.21 2.83
6737 7248 9.128107 CTTCATGTGGTATATGAAACACAAAAC 57.872 33.333 0.58 0.00 45.65 2.43
6796 7308 4.296690 GCATTTTCTCTGCCATATTGCTC 58.703 43.478 0.00 0.00 33.44 4.26
6797 7309 4.202080 GCATTTTCTCTGCCATATTGCTCA 60.202 41.667 0.00 0.00 33.44 4.26
6813 7325 9.582431 CATATTGCTCACAGAATTGAAGAAATT 57.418 29.630 0.00 0.00 41.33 1.82
6930 7602 2.978978 TCTGAGAAACCTGGACATGGAA 59.021 45.455 0.00 0.00 0.00 3.53
7035 7711 2.159099 TGAGATCTTATGCACCCGTGAC 60.159 50.000 0.00 0.00 0.00 3.67
7109 7787 6.410540 AGTTCCATTCTACTGTGATTCCTTC 58.589 40.000 0.00 0.00 0.00 3.46
7367 8048 0.107312 ATGATGGTGAGAGCACTGGC 60.107 55.000 0.00 0.00 44.52 4.85
7551 8234 8.055181 ACTCCCATCTCAAAATAGCTTGAATAA 58.945 33.333 0.00 0.00 34.96 1.40
7553 8236 8.274322 TCCCATCTCAAAATAGCTTGAATAAGA 58.726 33.333 0.00 0.00 34.96 2.10
7590 8318 3.703001 TCATCAGTTTCCTTCTGACCC 57.297 47.619 0.00 0.00 43.32 4.46
7628 8360 6.607019 TCCTTCCCAAAATAAGTGTTGTACT 58.393 36.000 0.00 0.00 42.89 2.73
7675 8407 7.318893 GGACGGAGGGAGTATATTAATAACAC 58.681 42.308 0.00 1.32 0.00 3.32
7684 8416 8.246871 GGAGTATATTAATAACACGTACTCCCC 58.753 40.741 25.66 13.40 45.48 4.81
7704 8436 6.779860 TCCCCCTGTAAAGAAATATATGAGC 58.220 40.000 0.00 0.00 0.00 4.26
7705 8437 6.562608 TCCCCCTGTAAAGAAATATATGAGCT 59.437 38.462 0.00 0.00 0.00 4.09
7829 8596 5.304357 TCTTTTACTGATCCAGATATGGCGA 59.696 40.000 0.00 0.00 35.18 5.54
7923 8690 2.125350 GCACTCCGAGGGCTTGAG 60.125 66.667 15.79 0.00 42.59 3.02
7988 8755 2.501723 TCCTCTGATGCTAGAACAACCC 59.498 50.000 0.00 0.00 0.00 4.11
8137 8904 3.181478 ACATTGTACCGGTAGCTTCTAGC 60.181 47.826 16.41 0.60 42.84 3.42
8249 9677 3.832490 TGAGCCTGTCTAGTTGCTTCTTA 59.168 43.478 0.00 0.00 33.41 2.10
8253 9681 5.480772 AGCCTGTCTAGTTGCTTCTTACTTA 59.519 40.000 0.00 0.00 0.00 2.24
8336 9764 1.282570 CCGTCGCTGTGCAATTTGT 59.717 52.632 0.00 0.00 0.00 2.83
8351 9779 4.355437 CAATTTGTGCTTTGGTCACGTTA 58.645 39.130 0.00 0.00 37.26 3.18
8459 9918 3.249799 TGTGACGGCAAATGTAGTTTCAG 59.750 43.478 0.00 0.00 0.00 3.02
8504 9968 5.086104 AGCTAATAGATGTGTTTCGTGGT 57.914 39.130 0.00 0.00 0.00 4.16
8516 9980 3.428282 CGTGGTACAAAGCGGGCC 61.428 66.667 0.00 0.00 44.16 5.80
8572 10101 6.506500 AGATCTGTGCTGTTAAAATCCTTG 57.493 37.500 0.00 0.00 0.00 3.61
8573 10102 6.006449 AGATCTGTGCTGTTAAAATCCTTGT 58.994 36.000 0.00 0.00 0.00 3.16
8575 10104 3.976169 TGTGCTGTTAAAATCCTTGTGC 58.024 40.909 0.00 0.00 0.00 4.57
8578 10107 4.622740 GTGCTGTTAAAATCCTTGTGCATC 59.377 41.667 0.00 0.00 0.00 3.91
8583 10112 7.230849 TGTTAAAATCCTTGTGCATCAGATT 57.769 32.000 0.00 0.00 0.00 2.40
8584 10113 8.347004 TGTTAAAATCCTTGTGCATCAGATTA 57.653 30.769 0.00 0.00 0.00 1.75
8585 10114 8.801299 TGTTAAAATCCTTGTGCATCAGATTAA 58.199 29.630 0.00 0.00 0.00 1.40
8586 10115 9.294030 GTTAAAATCCTTGTGCATCAGATTAAG 57.706 33.333 0.00 0.00 0.00 1.85
8588 10117 6.939132 AATCCTTGTGCATCAGATTAAGAG 57.061 37.500 0.00 0.00 0.00 2.85
8589 10118 4.774124 TCCTTGTGCATCAGATTAAGAGG 58.226 43.478 0.00 0.00 0.00 3.69
8591 10120 5.425217 TCCTTGTGCATCAGATTAAGAGGTA 59.575 40.000 0.00 0.00 0.00 3.08
8593 10122 6.204301 CCTTGTGCATCAGATTAAGAGGTATG 59.796 42.308 0.00 0.00 0.00 2.39
8595 10124 6.051074 TGTGCATCAGATTAAGAGGTATGTG 58.949 40.000 0.00 0.00 0.00 3.21
8596 10125 6.051717 GTGCATCAGATTAAGAGGTATGTGT 58.948 40.000 0.00 0.00 0.00 3.72
8638 13513 7.800380 CCGCATCTTACTGAATAATTGATTGAC 59.200 37.037 0.00 0.00 0.00 3.18
8665 13540 2.374504 AGGGCATCTATCTTGTCCATGG 59.625 50.000 4.97 4.97 41.47 3.66
8674 13549 7.437713 TCTATCTTGTCCATGGTAAAGATGT 57.562 36.000 32.55 21.60 39.20 3.06
8774 13649 2.990479 GGTTCCGATCTGGCCACT 59.010 61.111 0.00 0.00 37.80 4.00
8876 13758 3.961414 TTCCTTCACCCACCCGGC 61.961 66.667 0.00 0.00 33.26 6.13
8886 13768 1.529152 CCCACCCGGCTGTTAAAACC 61.529 60.000 0.00 0.00 0.00 3.27
8901 13783 7.581213 TGTTAAAACCTGGATGGCATATTAG 57.419 36.000 0.00 0.00 40.22 1.73
8902 13784 6.040391 TGTTAAAACCTGGATGGCATATTAGC 59.960 38.462 0.00 0.00 40.22 3.09
8904 13786 4.459852 AACCTGGATGGCATATTAGCTT 57.540 40.909 0.00 0.00 40.22 3.74
8905 13787 3.759581 ACCTGGATGGCATATTAGCTTG 58.240 45.455 0.00 0.00 40.22 4.01
8906 13788 2.490903 CCTGGATGGCATATTAGCTTGC 59.509 50.000 0.00 0.00 38.14 4.01
8907 13789 3.418995 CTGGATGGCATATTAGCTTGCT 58.581 45.455 0.00 0.00 38.88 3.91
8908 13790 3.151554 TGGATGGCATATTAGCTTGCTG 58.848 45.455 0.00 0.00 38.88 4.41
8909 13791 2.094854 GGATGGCATATTAGCTTGCTGC 60.095 50.000 0.00 5.12 38.88 5.25
8910 13792 2.055684 TGGCATATTAGCTTGCTGCA 57.944 45.000 7.97 0.00 45.94 4.41
8911 13793 2.589720 TGGCATATTAGCTTGCTGCAT 58.410 42.857 1.84 0.00 45.94 3.96
8912 13794 2.555325 TGGCATATTAGCTTGCTGCATC 59.445 45.455 1.84 0.00 45.94 3.91
8913 13795 2.413765 GGCATATTAGCTTGCTGCATCG 60.414 50.000 1.84 0.00 45.94 3.84
8914 13796 2.413765 GCATATTAGCTTGCTGCATCGG 60.414 50.000 1.84 0.00 45.94 4.18
8915 13797 2.908688 TATTAGCTTGCTGCATCGGA 57.091 45.000 1.84 0.00 45.94 4.55
8916 13798 2.042686 ATTAGCTTGCTGCATCGGAA 57.957 45.000 1.84 0.00 45.94 4.30
8917 13799 2.042686 TTAGCTTGCTGCATCGGAAT 57.957 45.000 1.84 0.00 45.94 3.01
8918 13800 1.302366 TAGCTTGCTGCATCGGAATG 58.698 50.000 1.84 0.00 45.94 2.67
8919 13801 0.393402 AGCTTGCTGCATCGGAATGA 60.393 50.000 1.84 0.00 45.94 2.57
8920 13802 0.666913 GCTTGCTGCATCGGAATGAT 59.333 50.000 1.84 0.00 42.31 2.45
8921 13803 1.875514 GCTTGCTGCATCGGAATGATA 59.124 47.619 1.84 0.00 42.31 2.15
8922 13804 2.291465 GCTTGCTGCATCGGAATGATAA 59.709 45.455 1.84 0.00 42.31 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.918630 ATCAAATGCCTATTTAATTCACATAGC 57.081 29.630 0.00 0.00 34.81 2.97
11 12 9.491675 CATGGCAATTAATCAAATGCCTATTTA 57.508 29.630 23.07 8.66 40.02 1.40
12 13 7.994334 ACATGGCAATTAATCAAATGCCTATTT 59.006 29.630 23.07 10.30 40.02 1.40
13 14 7.511268 ACATGGCAATTAATCAAATGCCTATT 58.489 30.769 23.07 10.37 40.02 1.73
14 15 7.069877 ACATGGCAATTAATCAAATGCCTAT 57.930 32.000 23.07 14.80 40.02 2.57
15 16 6.482898 ACATGGCAATTAATCAAATGCCTA 57.517 33.333 23.07 13.59 40.02 3.93
16 17 5.362105 ACATGGCAATTAATCAAATGCCT 57.638 34.783 23.07 10.85 40.02 4.75
17 18 6.293027 GCTTACATGGCAATTAATCAAATGCC 60.293 38.462 18.22 18.22 39.89 4.40
18 19 6.480981 AGCTTACATGGCAATTAATCAAATGC 59.519 34.615 0.00 1.87 0.00 3.56
19 20 7.707464 TGAGCTTACATGGCAATTAATCAAATG 59.293 33.333 0.00 0.00 0.00 2.32
20 21 7.784037 TGAGCTTACATGGCAATTAATCAAAT 58.216 30.769 0.00 0.00 0.00 2.32
21 22 7.093814 ACTGAGCTTACATGGCAATTAATCAAA 60.094 33.333 0.00 0.00 0.00 2.69
22 23 6.377996 ACTGAGCTTACATGGCAATTAATCAA 59.622 34.615 0.00 0.00 0.00 2.57
23 24 5.887598 ACTGAGCTTACATGGCAATTAATCA 59.112 36.000 0.00 0.00 0.00 2.57
24 25 6.382869 ACTGAGCTTACATGGCAATTAATC 57.617 37.500 0.00 0.00 0.00 1.75
25 26 6.153340 ACAACTGAGCTTACATGGCAATTAAT 59.847 34.615 0.00 0.00 0.00 1.40
26 27 5.476599 ACAACTGAGCTTACATGGCAATTAA 59.523 36.000 0.00 0.00 0.00 1.40
27 28 5.009631 ACAACTGAGCTTACATGGCAATTA 58.990 37.500 0.00 0.00 0.00 1.40
28 29 3.828451 ACAACTGAGCTTACATGGCAATT 59.172 39.130 0.00 0.00 0.00 2.32
29 30 3.192001 CACAACTGAGCTTACATGGCAAT 59.808 43.478 0.00 0.00 0.00 3.56
30 31 2.553602 CACAACTGAGCTTACATGGCAA 59.446 45.455 0.00 0.00 0.00 4.52
31 32 2.153645 CACAACTGAGCTTACATGGCA 58.846 47.619 0.00 0.00 0.00 4.92
32 33 2.160417 GTCACAACTGAGCTTACATGGC 59.840 50.000 0.00 0.00 0.00 4.40
33 34 2.413112 CGTCACAACTGAGCTTACATGG 59.587 50.000 0.00 0.00 0.00 3.66
34 35 3.317150 TCGTCACAACTGAGCTTACATG 58.683 45.455 0.00 0.00 0.00 3.21
35 36 3.660501 TCGTCACAACTGAGCTTACAT 57.339 42.857 0.00 0.00 0.00 2.29
36 37 3.660501 ATCGTCACAACTGAGCTTACA 57.339 42.857 0.00 0.00 0.00 2.41
37 38 4.992381 AAATCGTCACAACTGAGCTTAC 57.008 40.909 0.00 0.00 0.00 2.34
39 40 4.900635 AAAAATCGTCACAACTGAGCTT 57.099 36.364 0.00 0.00 0.00 3.74
72 73 0.880441 TCATTGTGTTCACCGCATGG 59.120 50.000 0.00 0.00 42.84 3.66
73 74 2.226200 TCTTCATTGTGTTCACCGCATG 59.774 45.455 0.37 0.00 32.58 4.06
74 75 2.503331 TCTTCATTGTGTTCACCGCAT 58.497 42.857 0.37 0.00 32.58 4.73
75 76 1.960417 TCTTCATTGTGTTCACCGCA 58.040 45.000 0.37 0.00 0.00 5.69
76 77 3.042887 GTTTCTTCATTGTGTTCACCGC 58.957 45.455 0.37 0.00 0.00 5.68
77 78 4.285807 TGTTTCTTCATTGTGTTCACCG 57.714 40.909 0.37 0.00 0.00 4.94
78 79 6.035975 CCTTTTGTTTCTTCATTGTGTTCACC 59.964 38.462 0.37 0.00 0.00 4.02
79 80 6.811170 TCCTTTTGTTTCTTCATTGTGTTCAC 59.189 34.615 0.00 0.00 0.00 3.18
80 81 6.929625 TCCTTTTGTTTCTTCATTGTGTTCA 58.070 32.000 0.00 0.00 0.00 3.18
81 82 7.826260 TTCCTTTTGTTTCTTCATTGTGTTC 57.174 32.000 0.00 0.00 0.00 3.18
82 83 8.503196 GTTTTCCTTTTGTTTCTTCATTGTGTT 58.497 29.630 0.00 0.00 0.00 3.32
83 84 7.659390 TGTTTTCCTTTTGTTTCTTCATTGTGT 59.341 29.630 0.00 0.00 0.00 3.72
84 85 8.027440 TGTTTTCCTTTTGTTTCTTCATTGTG 57.973 30.769 0.00 0.00 0.00 3.33
85 86 8.791327 ATGTTTTCCTTTTGTTTCTTCATTGT 57.209 26.923 0.00 0.00 0.00 2.71
105 106 9.793252 GCAGTGAAGTAATCATCATAAATGTTT 57.207 29.630 0.00 0.00 40.97 2.83
106 107 8.959548 TGCAGTGAAGTAATCATCATAAATGTT 58.040 29.630 0.00 0.00 40.97 2.71
107 108 8.510243 TGCAGTGAAGTAATCATCATAAATGT 57.490 30.769 0.00 0.00 40.97 2.71
108 109 9.608617 GATGCAGTGAAGTAATCATCATAAATG 57.391 33.333 0.00 0.00 40.97 2.32
109 110 9.570468 AGATGCAGTGAAGTAATCATCATAAAT 57.430 29.630 0.00 0.00 40.97 1.40
110 111 8.969260 AGATGCAGTGAAGTAATCATCATAAA 57.031 30.769 0.00 0.00 40.97 1.40
111 112 8.969260 AAGATGCAGTGAAGTAATCATCATAA 57.031 30.769 0.00 0.00 40.97 1.90
112 113 8.969260 AAAGATGCAGTGAAGTAATCATCATA 57.031 30.769 0.00 0.00 40.97 2.15
113 114 7.876936 AAAGATGCAGTGAAGTAATCATCAT 57.123 32.000 0.00 0.00 40.97 2.45
114 115 7.175467 ACAAAAGATGCAGTGAAGTAATCATCA 59.825 33.333 0.00 0.00 40.97 3.07
115 116 7.533426 ACAAAAGATGCAGTGAAGTAATCATC 58.467 34.615 0.00 0.00 40.97 2.92
116 117 7.458409 ACAAAAGATGCAGTGAAGTAATCAT 57.542 32.000 0.00 0.00 40.97 2.45
117 118 6.882610 ACAAAAGATGCAGTGAAGTAATCA 57.117 33.333 0.00 0.00 35.05 2.57
118 119 9.334693 CTAAACAAAAGATGCAGTGAAGTAATC 57.665 33.333 0.00 0.00 0.00 1.75
119 120 8.850156 ACTAAACAAAAGATGCAGTGAAGTAAT 58.150 29.630 0.00 0.00 0.00 1.89
120 121 8.220755 ACTAAACAAAAGATGCAGTGAAGTAA 57.779 30.769 0.00 0.00 0.00 2.24
121 122 7.801716 ACTAAACAAAAGATGCAGTGAAGTA 57.198 32.000 0.00 0.00 0.00 2.24
122 123 6.699575 ACTAAACAAAAGATGCAGTGAAGT 57.300 33.333 0.00 0.00 0.00 3.01
123 124 7.195646 TGAACTAAACAAAAGATGCAGTGAAG 58.804 34.615 0.00 0.00 0.00 3.02
124 125 7.094508 TGAACTAAACAAAAGATGCAGTGAA 57.905 32.000 0.00 0.00 0.00 3.18
125 126 6.318648 ACTGAACTAAACAAAAGATGCAGTGA 59.681 34.615 0.00 0.00 32.30 3.41
126 127 6.498304 ACTGAACTAAACAAAAGATGCAGTG 58.502 36.000 0.00 0.00 32.30 3.66
127 128 6.699575 ACTGAACTAAACAAAAGATGCAGT 57.300 33.333 0.00 0.00 0.00 4.40
143 144 9.847224 AAACCCGAAATATGATATTACTGAACT 57.153 29.630 0.00 0.00 0.00 3.01
169 170 9.491675 TCTTTCTGGACACACGTATAATTAAAA 57.508 29.630 0.00 0.00 0.00 1.52
170 171 9.661563 ATCTTTCTGGACACACGTATAATTAAA 57.338 29.630 0.00 0.00 0.00 1.52
171 172 9.309516 GATCTTTCTGGACACACGTATAATTAA 57.690 33.333 0.00 0.00 0.00 1.40
172 173 7.924412 GGATCTTTCTGGACACACGTATAATTA 59.076 37.037 0.00 0.00 0.00 1.40
173 174 6.761714 GGATCTTTCTGGACACACGTATAATT 59.238 38.462 0.00 0.00 0.00 1.40
174 175 6.281405 GGATCTTTCTGGACACACGTATAAT 58.719 40.000 0.00 0.00 0.00 1.28
175 176 5.394883 GGGATCTTTCTGGACACACGTATAA 60.395 44.000 0.00 0.00 0.00 0.98
176 177 4.098960 GGGATCTTTCTGGACACACGTATA 59.901 45.833 0.00 0.00 0.00 1.47
177 178 3.118738 GGGATCTTTCTGGACACACGTAT 60.119 47.826 0.00 0.00 0.00 3.06
178 179 2.232941 GGGATCTTTCTGGACACACGTA 59.767 50.000 0.00 0.00 0.00 3.57
179 180 1.002087 GGGATCTTTCTGGACACACGT 59.998 52.381 0.00 0.00 0.00 4.49
180 181 1.001974 TGGGATCTTTCTGGACACACG 59.998 52.381 0.00 0.00 0.00 4.49
181 182 2.859165 TGGGATCTTTCTGGACACAC 57.141 50.000 0.00 0.00 0.00 3.82
182 183 5.715439 AATATGGGATCTTTCTGGACACA 57.285 39.130 0.00 0.00 0.00 3.72
183 184 7.775561 ACTTTAATATGGGATCTTTCTGGACAC 59.224 37.037 0.00 0.00 0.00 3.67
184 185 7.872138 ACTTTAATATGGGATCTTTCTGGACA 58.128 34.615 0.00 0.00 0.00 4.02
185 186 8.753497 AACTTTAATATGGGATCTTTCTGGAC 57.247 34.615 0.00 0.00 0.00 4.02
223 224 9.406113 TCATCGATCTTCAGAGTCATGATATAT 57.594 33.333 0.00 0.00 0.00 0.86
224 225 8.798859 TCATCGATCTTCAGAGTCATGATATA 57.201 34.615 0.00 0.00 0.00 0.86
225 226 7.700022 TCATCGATCTTCAGAGTCATGATAT 57.300 36.000 0.00 0.00 0.00 1.63
226 227 7.230309 ACTTCATCGATCTTCAGAGTCATGATA 59.770 37.037 0.00 0.00 0.00 2.15
227 228 6.040729 ACTTCATCGATCTTCAGAGTCATGAT 59.959 38.462 0.00 0.00 0.00 2.45
228 229 5.359292 ACTTCATCGATCTTCAGAGTCATGA 59.641 40.000 0.00 0.00 0.00 3.07
229 230 5.590145 ACTTCATCGATCTTCAGAGTCATG 58.410 41.667 0.00 0.00 0.00 3.07
230 231 5.850557 ACTTCATCGATCTTCAGAGTCAT 57.149 39.130 0.00 0.00 0.00 3.06
231 232 5.651387 AACTTCATCGATCTTCAGAGTCA 57.349 39.130 0.00 0.00 0.00 3.41
232 233 8.020819 CCTATAACTTCATCGATCTTCAGAGTC 58.979 40.741 0.00 0.00 0.00 3.36
233 234 7.504238 ACCTATAACTTCATCGATCTTCAGAGT 59.496 37.037 0.00 0.00 0.00 3.24
234 235 7.881142 ACCTATAACTTCATCGATCTTCAGAG 58.119 38.462 0.00 0.00 0.00 3.35
235 236 7.825331 ACCTATAACTTCATCGATCTTCAGA 57.175 36.000 0.00 0.00 0.00 3.27
236 237 8.879342 AAACCTATAACTTCATCGATCTTCAG 57.121 34.615 0.00 0.00 0.00 3.02
237 238 9.314321 GAAAACCTATAACTTCATCGATCTTCA 57.686 33.333 0.00 0.00 0.00 3.02
238 239 9.535878 AGAAAACCTATAACTTCATCGATCTTC 57.464 33.333 0.00 0.00 0.00 2.87
239 240 9.892130 AAGAAAACCTATAACTTCATCGATCTT 57.108 29.630 0.00 0.00 0.00 2.40
240 241 9.319143 CAAGAAAACCTATAACTTCATCGATCT 57.681 33.333 0.00 0.00 0.00 2.75
241 242 9.314321 TCAAGAAAACCTATAACTTCATCGATC 57.686 33.333 0.00 0.00 0.00 3.69
242 243 9.099454 GTCAAGAAAACCTATAACTTCATCGAT 57.901 33.333 0.00 0.00 0.00 3.59
243 244 7.548075 GGTCAAGAAAACCTATAACTTCATCGA 59.452 37.037 0.00 0.00 33.78 3.59
244 245 7.549488 AGGTCAAGAAAACCTATAACTTCATCG 59.451 37.037 0.00 0.00 45.40 3.84
245 246 8.794335 AGGTCAAGAAAACCTATAACTTCATC 57.206 34.615 0.00 0.00 45.40 2.92
250 251 9.682465 GGAATTAGGTCAAGAAAACCTATAACT 57.318 33.333 3.03 0.00 46.21 2.24
251 252 9.457436 TGGAATTAGGTCAAGAAAACCTATAAC 57.543 33.333 3.03 0.00 46.21 1.89
252 253 9.457436 GTGGAATTAGGTCAAGAAAACCTATAA 57.543 33.333 3.03 0.00 46.21 0.98
253 254 8.050930 GGTGGAATTAGGTCAAGAAAACCTATA 58.949 37.037 3.03 0.00 46.21 1.31
254 255 6.890268 GGTGGAATTAGGTCAAGAAAACCTAT 59.110 38.462 3.03 0.00 46.21 2.57
255 256 6.183361 TGGTGGAATTAGGTCAAGAAAACCTA 60.183 38.462 0.00 0.00 45.40 3.08
257 258 4.830600 TGGTGGAATTAGGTCAAGAAAACC 59.169 41.667 0.00 0.00 37.03 3.27
258 259 5.300792 TGTGGTGGAATTAGGTCAAGAAAAC 59.699 40.000 0.00 0.00 0.00 2.43
259 260 5.300792 GTGTGGTGGAATTAGGTCAAGAAAA 59.699 40.000 0.00 0.00 0.00 2.29
260 261 4.825085 GTGTGGTGGAATTAGGTCAAGAAA 59.175 41.667 0.00 0.00 0.00 2.52
261 262 4.104102 AGTGTGGTGGAATTAGGTCAAGAA 59.896 41.667 0.00 0.00 0.00 2.52
262 263 3.650942 AGTGTGGTGGAATTAGGTCAAGA 59.349 43.478 0.00 0.00 0.00 3.02
263 264 3.753272 CAGTGTGGTGGAATTAGGTCAAG 59.247 47.826 0.00 0.00 0.00 3.02
264 265 3.750371 CAGTGTGGTGGAATTAGGTCAA 58.250 45.455 0.00 0.00 0.00 3.18
265 266 2.552155 GCAGTGTGGTGGAATTAGGTCA 60.552 50.000 0.00 0.00 0.00 4.02
266 267 2.084546 GCAGTGTGGTGGAATTAGGTC 58.915 52.381 0.00 0.00 0.00 3.85
267 268 1.705186 AGCAGTGTGGTGGAATTAGGT 59.295 47.619 0.00 0.00 0.00 3.08
268 269 2.496899 AGCAGTGTGGTGGAATTAGG 57.503 50.000 0.00 0.00 0.00 2.69
269 270 4.393062 CAGTTAGCAGTGTGGTGGAATTAG 59.607 45.833 0.00 0.00 0.00 1.73
270 271 4.202419 ACAGTTAGCAGTGTGGTGGAATTA 60.202 41.667 0.00 0.00 35.05 1.40
271 272 3.149196 CAGTTAGCAGTGTGGTGGAATT 58.851 45.455 0.00 0.00 0.00 2.17
272 273 2.106511 ACAGTTAGCAGTGTGGTGGAAT 59.893 45.455 0.00 0.00 35.05 3.01
273 274 1.488812 ACAGTTAGCAGTGTGGTGGAA 59.511 47.619 0.00 0.00 35.05 3.53
274 275 1.128200 ACAGTTAGCAGTGTGGTGGA 58.872 50.000 0.00 0.00 35.05 4.02
275 276 1.967319 AACAGTTAGCAGTGTGGTGG 58.033 50.000 0.00 0.00 36.62 4.61
276 277 2.033299 CCAAACAGTTAGCAGTGTGGTG 59.967 50.000 3.45 0.00 38.16 4.17
277 278 2.297701 CCAAACAGTTAGCAGTGTGGT 58.702 47.619 3.45 0.00 38.16 4.16
278 279 2.033299 CACCAAACAGTTAGCAGTGTGG 59.967 50.000 9.43 9.43 46.48 4.17
279 280 2.541588 GCACCAAACAGTTAGCAGTGTG 60.542 50.000 0.00 0.00 36.62 3.82
280 281 1.676006 GCACCAAACAGTTAGCAGTGT 59.324 47.619 0.00 0.00 38.30 3.55
281 282 1.675483 TGCACCAAACAGTTAGCAGTG 59.325 47.619 0.00 0.00 0.00 3.66
282 283 2.051334 TGCACCAAACAGTTAGCAGT 57.949 45.000 0.00 0.00 0.00 4.40
283 284 3.648339 AATGCACCAAACAGTTAGCAG 57.352 42.857 0.00 0.00 35.26 4.24
284 285 4.339530 TGTTAATGCACCAAACAGTTAGCA 59.660 37.500 6.31 5.45 36.34 3.49
285 286 4.865776 TGTTAATGCACCAAACAGTTAGC 58.134 39.130 6.31 0.00 0.00 3.09
286 287 6.932901 CATGTTAATGCACCAAACAGTTAG 57.067 37.500 13.69 3.58 36.62 2.34
322 323 8.830580 CGACATGTCTAGTGATTTTATTGGAAT 58.169 33.333 22.95 0.00 0.00 3.01
323 324 7.822334 ACGACATGTCTAGTGATTTTATTGGAA 59.178 33.333 22.95 0.00 0.00 3.53
324 325 7.327975 ACGACATGTCTAGTGATTTTATTGGA 58.672 34.615 22.95 0.00 0.00 3.53
325 326 7.539712 ACGACATGTCTAGTGATTTTATTGG 57.460 36.000 22.95 4.69 0.00 3.16
326 327 8.873830 AGAACGACATGTCTAGTGATTTTATTG 58.126 33.333 22.95 5.31 0.00 1.90
328 329 9.737427 CTAGAACGACATGTCTAGTGATTTTAT 57.263 33.333 22.95 0.00 0.00 1.40
329 330 8.188799 CCTAGAACGACATGTCTAGTGATTTTA 58.811 37.037 22.95 6.97 31.68 1.52
330 331 7.036220 CCTAGAACGACATGTCTAGTGATTTT 58.964 38.462 22.95 6.29 31.68 1.82
331 332 6.153000 ACCTAGAACGACATGTCTAGTGATTT 59.847 38.462 22.95 5.20 31.68 2.17
332 333 5.652891 ACCTAGAACGACATGTCTAGTGATT 59.347 40.000 22.95 7.91 31.68 2.57
333 334 5.194432 ACCTAGAACGACATGTCTAGTGAT 58.806 41.667 22.95 9.53 31.68 3.06
334 335 4.586884 ACCTAGAACGACATGTCTAGTGA 58.413 43.478 22.95 5.51 31.68 3.41
335 336 4.966965 ACCTAGAACGACATGTCTAGTG 57.033 45.455 22.95 10.28 31.68 2.74
336 337 7.507829 AGTATACCTAGAACGACATGTCTAGT 58.492 38.462 22.95 12.00 31.68 2.57
337 338 7.966246 AGTATACCTAGAACGACATGTCTAG 57.034 40.000 22.95 16.40 32.58 2.43
338 339 7.989170 TGAAGTATACCTAGAACGACATGTCTA 59.011 37.037 22.95 8.16 0.00 2.59
339 340 6.827251 TGAAGTATACCTAGAACGACATGTCT 59.173 38.462 22.95 5.76 0.00 3.41
340 341 7.024340 TGAAGTATACCTAGAACGACATGTC 57.976 40.000 16.21 16.21 0.00 3.06
341 342 7.584122 ATGAAGTATACCTAGAACGACATGT 57.416 36.000 0.00 0.00 0.00 3.21
344 345 8.080417 GCAATATGAAGTATACCTAGAACGACA 58.920 37.037 0.00 0.00 0.00 4.35
345 346 8.298140 AGCAATATGAAGTATACCTAGAACGAC 58.702 37.037 0.00 0.00 0.00 4.34
346 347 8.405418 AGCAATATGAAGTATACCTAGAACGA 57.595 34.615 0.00 0.00 0.00 3.85
347 348 9.477484 AAAGCAATATGAAGTATACCTAGAACG 57.523 33.333 0.00 0.00 0.00 3.95
372 373 8.083462 AGAAAACGGTACACAAAAGAAGAAAAA 58.917 29.630 0.00 0.00 0.00 1.94
373 374 7.595604 AGAAAACGGTACACAAAAGAAGAAAA 58.404 30.769 0.00 0.00 0.00 2.29
374 375 7.148355 AGAAAACGGTACACAAAAGAAGAAA 57.852 32.000 0.00 0.00 0.00 2.52
375 376 6.746745 AGAAAACGGTACACAAAAGAAGAA 57.253 33.333 0.00 0.00 0.00 2.52
376 377 6.746745 AAGAAAACGGTACACAAAAGAAGA 57.253 33.333 0.00 0.00 0.00 2.87
377 378 7.008901 GGAAAAGAAAACGGTACACAAAAGAAG 59.991 37.037 0.00 0.00 0.00 2.85
378 379 6.807720 GGAAAAGAAAACGGTACACAAAAGAA 59.192 34.615 0.00 0.00 0.00 2.52
379 380 6.324042 GGAAAAGAAAACGGTACACAAAAGA 58.676 36.000 0.00 0.00 0.00 2.52
380 381 5.517411 GGGAAAAGAAAACGGTACACAAAAG 59.483 40.000 0.00 0.00 0.00 2.27
381 382 5.409211 GGGAAAAGAAAACGGTACACAAAA 58.591 37.500 0.00 0.00 0.00 2.44
382 383 4.438472 CGGGAAAAGAAAACGGTACACAAA 60.438 41.667 0.00 0.00 0.00 2.83
383 384 3.065095 CGGGAAAAGAAAACGGTACACAA 59.935 43.478 0.00 0.00 0.00 3.33
384 385 2.613133 CGGGAAAAGAAAACGGTACACA 59.387 45.455 0.00 0.00 0.00 3.72
385 386 2.602933 GCGGGAAAAGAAAACGGTACAC 60.603 50.000 0.00 0.00 0.00 2.90
386 387 1.603326 GCGGGAAAAGAAAACGGTACA 59.397 47.619 0.00 0.00 0.00 2.90
387 388 1.875514 AGCGGGAAAAGAAAACGGTAC 59.124 47.619 0.00 0.00 33.21 3.34
388 389 2.259266 AGCGGGAAAAGAAAACGGTA 57.741 45.000 0.00 0.00 33.21 4.02
389 390 1.395635 AAGCGGGAAAAGAAAACGGT 58.604 45.000 0.00 0.00 36.80 4.83
390 391 2.502213 AAAGCGGGAAAAGAAAACGG 57.498 45.000 0.00 0.00 0.00 4.44
391 392 5.342259 CAGATAAAAGCGGGAAAAGAAAACG 59.658 40.000 0.00 0.00 0.00 3.60
392 393 6.213677 ACAGATAAAAGCGGGAAAAGAAAAC 58.786 36.000 0.00 0.00 0.00 2.43
393 394 6.399639 ACAGATAAAAGCGGGAAAAGAAAA 57.600 33.333 0.00 0.00 0.00 2.29
394 395 7.696992 ATACAGATAAAAGCGGGAAAAGAAA 57.303 32.000 0.00 0.00 0.00 2.52
395 396 7.696992 AATACAGATAAAAGCGGGAAAAGAA 57.303 32.000 0.00 0.00 0.00 2.52
396 397 7.696992 AAATACAGATAAAAGCGGGAAAAGA 57.303 32.000 0.00 0.00 0.00 2.52
397 398 8.757164 AAAAATACAGATAAAAGCGGGAAAAG 57.243 30.769 0.00 0.00 0.00 2.27
398 399 9.628746 GTAAAAATACAGATAAAAGCGGGAAAA 57.371 29.630 0.00 0.00 0.00 2.29
399 400 8.794553 TGTAAAAATACAGATAAAAGCGGGAAA 58.205 29.630 0.00 0.00 0.00 3.13
400 401 8.338072 TGTAAAAATACAGATAAAAGCGGGAA 57.662 30.769 0.00 0.00 0.00 3.97
401 402 7.925043 TGTAAAAATACAGATAAAAGCGGGA 57.075 32.000 0.00 0.00 0.00 5.14
402 403 9.233232 GATTGTAAAAATACAGATAAAAGCGGG 57.767 33.333 0.00 0.00 0.00 6.13
403 404 9.781834 TGATTGTAAAAATACAGATAAAAGCGG 57.218 29.630 0.00 0.00 0.00 5.52
438 439 9.013229 ACAGCAAACTTAAATGTGAGATATTGA 57.987 29.630 0.00 0.00 0.00 2.57
439 440 9.630098 AACAGCAAACTTAAATGTGAGATATTG 57.370 29.630 0.00 0.00 0.00 1.90
441 442 9.846248 GAAACAGCAAACTTAAATGTGAGATAT 57.154 29.630 0.00 0.00 0.00 1.63
442 443 8.845227 TGAAACAGCAAACTTAAATGTGAGATA 58.155 29.630 0.00 0.00 0.00 1.98
443 444 7.715657 TGAAACAGCAAACTTAAATGTGAGAT 58.284 30.769 0.00 0.00 0.00 2.75
444 445 7.094508 TGAAACAGCAAACTTAAATGTGAGA 57.905 32.000 0.00 0.00 0.00 3.27
445 446 7.095940 CCATGAAACAGCAAACTTAAATGTGAG 60.096 37.037 0.00 0.00 0.00 3.51
446 447 6.700960 CCATGAAACAGCAAACTTAAATGTGA 59.299 34.615 0.00 0.00 0.00 3.58
447 448 6.564499 GCCATGAAACAGCAAACTTAAATGTG 60.564 38.462 0.00 0.00 0.00 3.21
448 449 5.466393 GCCATGAAACAGCAAACTTAAATGT 59.534 36.000 0.00 0.00 0.00 2.71
449 450 5.466058 TGCCATGAAACAGCAAACTTAAATG 59.534 36.000 0.00 0.00 32.56 2.32
450 451 5.609423 TGCCATGAAACAGCAAACTTAAAT 58.391 33.333 0.00 0.00 32.56 1.40
451 452 5.016051 TGCCATGAAACAGCAAACTTAAA 57.984 34.783 0.00 0.00 32.56 1.52
452 453 4.662468 TGCCATGAAACAGCAAACTTAA 57.338 36.364 0.00 0.00 32.56 1.85
453 454 4.662468 TTGCCATGAAACAGCAAACTTA 57.338 36.364 4.14 0.00 43.14 2.24
454 455 3.540314 TTGCCATGAAACAGCAAACTT 57.460 38.095 4.14 0.00 43.14 2.66
458 459 1.479730 TGTGTTGCCATGAAACAGCAA 59.520 42.857 12.53 7.94 43.83 3.91
459 460 1.109609 TGTGTTGCCATGAAACAGCA 58.890 45.000 12.53 11.00 38.17 4.41
460 461 1.202394 TGTGTGTTGCCATGAAACAGC 60.202 47.619 12.53 9.89 38.17 4.40
461 462 2.867287 TGTGTGTTGCCATGAAACAG 57.133 45.000 12.53 0.00 38.17 3.16
462 463 3.257393 GTTTGTGTGTTGCCATGAAACA 58.743 40.909 9.17 9.17 35.22 2.83
463 464 3.257393 TGTTTGTGTGTTGCCATGAAAC 58.743 40.909 0.00 0.00 0.00 2.78
464 465 3.599730 TGTTTGTGTGTTGCCATGAAA 57.400 38.095 0.00 0.00 0.00 2.69
465 466 3.815856 ATGTTTGTGTGTTGCCATGAA 57.184 38.095 0.00 0.00 0.00 2.57
466 467 3.815856 AATGTTTGTGTGTTGCCATGA 57.184 38.095 0.00 0.00 0.00 3.07
467 468 6.542574 AAATAATGTTTGTGTGTTGCCATG 57.457 33.333 0.00 0.00 0.00 3.66
468 469 7.565323 AAAAATAATGTTTGTGTGTTGCCAT 57.435 28.000 0.00 0.00 0.00 4.40
469 470 6.992063 AAAAATAATGTTTGTGTGTTGCCA 57.008 29.167 0.00 0.00 0.00 4.92
562 566 9.934190 ATGATTTTTCGTTTTTGAGGAAATTTG 57.066 25.926 0.00 0.00 40.60 2.32
570 574 9.787626 CTCATTTGATGATTTTTCGTTTTTGAG 57.212 29.630 0.00 0.00 38.85 3.02
718 757 3.306780 GCTTCAGTAAGTAGGGCAGACAA 60.307 47.826 0.00 0.00 34.99 3.18
1068 1122 0.450983 CGAACCAGTCGTAGAGGACC 59.549 60.000 0.00 0.00 45.09 4.46
1248 1302 2.178912 TCGTGAAGGCAAAACCCTAG 57.821 50.000 0.00 0.00 40.58 3.02
1249 1303 2.223745 GTTCGTGAAGGCAAAACCCTA 58.776 47.619 0.00 0.00 40.58 3.53
1250 1304 1.029681 GTTCGTGAAGGCAAAACCCT 58.970 50.000 0.00 0.00 40.58 4.34
1251 1305 0.317519 CGTTCGTGAAGGCAAAACCC 60.318 55.000 0.00 0.00 40.58 4.11
1252 1306 0.379316 ACGTTCGTGAAGGCAAAACC 59.621 50.000 0.00 0.00 39.61 3.27
1253 1307 3.185797 AGATACGTTCGTGAAGGCAAAAC 59.814 43.478 8.14 0.00 0.00 2.43
1254 1308 3.395639 AGATACGTTCGTGAAGGCAAAA 58.604 40.909 8.14 0.00 0.00 2.44
1255 1309 3.034721 AGATACGTTCGTGAAGGCAAA 57.965 42.857 8.14 0.00 0.00 3.68
1256 1310 2.736144 AGATACGTTCGTGAAGGCAA 57.264 45.000 8.14 0.00 0.00 4.52
1257 1311 2.098607 CCTAGATACGTTCGTGAAGGCA 59.901 50.000 8.14 0.00 0.00 4.75
1258 1312 2.543238 CCCTAGATACGTTCGTGAAGGC 60.543 54.545 8.14 0.00 0.00 4.35
1259 1313 2.686915 ACCCTAGATACGTTCGTGAAGG 59.313 50.000 8.14 8.56 0.00 3.46
1260 1314 4.367386 AACCCTAGATACGTTCGTGAAG 57.633 45.455 8.14 0.76 0.00 3.02
1261 1315 4.789012 AAACCCTAGATACGTTCGTGAA 57.211 40.909 8.14 0.00 0.00 3.18
1262 1316 4.487948 CAAAACCCTAGATACGTTCGTGA 58.512 43.478 8.14 0.00 0.00 4.35
1263 1317 3.061697 GCAAAACCCTAGATACGTTCGTG 59.938 47.826 8.14 0.00 0.00 4.35
1264 1318 3.256558 GCAAAACCCTAGATACGTTCGT 58.743 45.455 0.00 2.91 0.00 3.85
1265 1319 2.606272 GGCAAAACCCTAGATACGTTCG 59.394 50.000 0.00 0.00 0.00 3.95
1266 1320 3.870274 AGGCAAAACCCTAGATACGTTC 58.130 45.455 0.00 0.00 40.58 3.95
1267 1321 3.994931 AGGCAAAACCCTAGATACGTT 57.005 42.857 0.00 0.00 40.58 3.99
1268 1322 3.262405 TGAAGGCAAAACCCTAGATACGT 59.738 43.478 0.00 0.00 40.58 3.57
1269 1323 3.621715 GTGAAGGCAAAACCCTAGATACG 59.378 47.826 0.00 0.00 40.58 3.06
1270 1324 3.621715 CGTGAAGGCAAAACCCTAGATAC 59.378 47.826 0.00 0.00 40.58 2.24
1271 1325 3.516300 TCGTGAAGGCAAAACCCTAGATA 59.484 43.478 0.00 0.00 40.58 1.98
1272 1326 2.304761 TCGTGAAGGCAAAACCCTAGAT 59.695 45.455 0.00 0.00 40.58 1.98
1273 1327 1.695242 TCGTGAAGGCAAAACCCTAGA 59.305 47.619 0.00 0.00 40.58 2.43
1287 1341 4.789012 AAACCCTAGATACGTTCGTGAA 57.211 40.909 8.14 0.00 0.00 3.18
1288 1342 4.487948 CAAAACCCTAGATACGTTCGTGA 58.512 43.478 8.14 0.00 0.00 4.35
1335 1389 1.226802 CAGATCTGGAGACACCGCG 60.227 63.158 15.38 0.00 42.61 6.46
1359 1413 1.198094 TAGCAGCCCAGGCACTAACA 61.198 55.000 12.03 0.00 44.88 2.41
1539 1597 8.638565 CAATCACATTGAAAAGATAAAACGGTC 58.361 33.333 0.00 0.00 42.83 4.79
1559 1617 5.178996 CACTCTATAGATGGCAAGCAATCAC 59.821 44.000 11.73 0.00 0.00 3.06
1666 1724 4.097437 ACAGAATGCCACTAATCTGCAATG 59.903 41.667 1.77 0.00 42.34 2.82
1669 1727 3.354948 ACAGAATGCCACTAATCTGCA 57.645 42.857 1.77 0.00 42.34 4.41
1670 1728 4.418392 CAAACAGAATGCCACTAATCTGC 58.582 43.478 1.77 0.00 42.34 4.26
1703 1761 3.567670 AAAACGCTGCAAAAATGAACG 57.432 38.095 0.00 0.00 0.00 3.95
1746 1804 8.402472 CCAACAGATCGGCAAATAAATTAGTTA 58.598 33.333 0.00 0.00 0.00 2.24
1871 1929 2.159448 TGTTTGTGGAAGCACTCAAACG 60.159 45.455 19.28 0.00 46.84 3.60
2021 2079 3.638160 ACTTCACAGTTTGCAATGACCAT 59.362 39.130 7.04 0.00 0.00 3.55
2237 2305 3.409026 ACTGGCAGAGAAGGTTAACTG 57.591 47.619 23.66 0.00 0.00 3.16
2276 2358 7.060421 CCAAGGAACCACCATAAGTATACAAT 58.940 38.462 5.50 0.00 42.04 2.71
2277 2359 6.012333 ACCAAGGAACCACCATAAGTATACAA 60.012 38.462 5.50 0.00 42.04 2.41
2278 2360 5.489637 ACCAAGGAACCACCATAAGTATACA 59.510 40.000 5.50 0.00 42.04 2.29
2279 2361 5.997843 ACCAAGGAACCACCATAAGTATAC 58.002 41.667 0.00 0.00 42.04 1.47
2280 2362 6.645884 AACCAAGGAACCACCATAAGTATA 57.354 37.500 0.00 0.00 42.04 1.47
2281 2363 5.530176 AACCAAGGAACCACCATAAGTAT 57.470 39.130 0.00 0.00 42.04 2.12
2282 2364 5.327737 AAACCAAGGAACCACCATAAGTA 57.672 39.130 0.00 0.00 42.04 2.24
2283 2365 3.895704 AACCAAGGAACCACCATAAGT 57.104 42.857 0.00 0.00 42.04 2.24
2284 2366 5.545063 AAAAACCAAGGAACCACCATAAG 57.455 39.130 0.00 0.00 42.04 1.73
2285 2367 6.555360 ACATAAAAACCAAGGAACCACCATAA 59.445 34.615 0.00 0.00 42.04 1.90
2286 2368 6.078664 ACATAAAAACCAAGGAACCACCATA 58.921 36.000 0.00 0.00 42.04 2.74
2287 2369 4.904853 ACATAAAAACCAAGGAACCACCAT 59.095 37.500 0.00 0.00 42.04 3.55
2288 2370 4.290942 ACATAAAAACCAAGGAACCACCA 58.709 39.130 0.00 0.00 42.04 4.17
2289 2371 4.948341 ACATAAAAACCAAGGAACCACC 57.052 40.909 0.00 0.00 39.35 4.61
2338 2427 2.024655 TCCTAGTTTAGGCCCTCTCGAA 60.025 50.000 0.00 0.00 45.82 3.71
2420 2509 1.135859 GTGCTTCCTCATTGAACTGCG 60.136 52.381 0.00 0.00 0.00 5.18
2552 2650 9.233232 AGAAAATTAAAAACAGAGTAAGCAACG 57.767 29.630 0.00 0.00 0.00 4.10
2703 2801 4.700213 GGCATGAAAAGTAAACTGCTAGGA 59.300 41.667 0.00 0.00 0.00 2.94
2728 2827 8.463930 ACTGACTTCCAACTCATAAATCAAAA 57.536 30.769 0.00 0.00 0.00 2.44
2790 2889 3.112263 TCCCTGATTCGGTTTACCTGAT 58.888 45.455 0.00 0.00 0.00 2.90
2791 2890 2.500098 CTCCCTGATTCGGTTTACCTGA 59.500 50.000 0.00 0.00 0.00 3.86
2797 2896 1.340114 GGAAGCTCCCTGATTCGGTTT 60.340 52.381 0.00 0.00 41.59 3.27
2836 2935 0.525668 GACTGTCCGTATGAGTGGCG 60.526 60.000 0.00 0.00 0.00 5.69
2839 2938 2.092323 TCTGGACTGTCCGTATGAGTG 58.908 52.381 21.15 4.87 40.17 3.51
2906 3005 4.101585 ACCGGAATGCTCAAGAGATTATCA 59.898 41.667 9.46 0.00 0.00 2.15
3076 3175 7.099266 ACTTTCAACATCTCAAAATGACACA 57.901 32.000 0.00 0.00 0.00 3.72
3111 3210 9.964354 CCTATATGATTTTTCCAGTCCATCATA 57.036 33.333 0.00 0.00 39.81 2.15
3340 3444 5.560722 TCCACAGAGTTTTCACCATTAGA 57.439 39.130 0.00 0.00 0.00 2.10
3386 3496 5.986741 CGCCTACACATGGTGTATACATAAA 59.013 40.000 9.18 0.00 46.01 1.40
3445 3555 8.422973 TTTAGATGGCAAATGCAATTATGTTC 57.577 30.769 7.80 0.00 44.36 3.18
3516 3628 2.299326 AAATCCCTATCCATGCTGCC 57.701 50.000 0.00 0.00 0.00 4.85
3517 3629 4.829492 AGTAAAAATCCCTATCCATGCTGC 59.171 41.667 0.00 0.00 0.00 5.25
3518 3630 5.829924 ACAGTAAAAATCCCTATCCATGCTG 59.170 40.000 0.00 0.00 0.00 4.41
3747 3859 3.854286 GACAAACAGTCAACGGTAGTG 57.146 47.619 0.00 0.00 46.77 2.74
3915 4027 1.180907 TTCAGCAACCACAAACTGCA 58.819 45.000 0.00 0.00 38.58 4.41
3964 4076 3.077484 ACATGTTCCAGCTATTGCAGT 57.923 42.857 1.12 0.00 42.74 4.40
3966 4078 3.419943 TCAACATGTTCCAGCTATTGCA 58.580 40.909 8.48 0.00 42.74 4.08
4044 4156 2.068519 CTTGCGTCTGACATTGCAGTA 58.931 47.619 8.73 0.00 38.75 2.74
4063 4175 3.840666 TCCTGGAAGAGACACATTTAGCT 59.159 43.478 0.00 0.00 34.07 3.32
4064 4176 4.207891 TCCTGGAAGAGACACATTTAGC 57.792 45.455 0.00 0.00 34.07 3.09
4091 4203 9.667107 ACGAGAGATATTTAATTTTCAGTGGAA 57.333 29.630 0.00 0.00 0.00 3.53
4225 4337 9.679596 CGTGTATTACAAAGAAAAAGTATACGG 57.320 33.333 0.00 0.00 0.00 4.02
4271 4383 2.224209 GGAAGTTCCGTTCTGAGGTTCA 60.224 50.000 6.06 0.00 0.00 3.18
4272 4384 2.414806 GGAAGTTCCGTTCTGAGGTTC 58.585 52.381 6.06 0.00 0.00 3.62
4273 4385 2.545537 GGAAGTTCCGTTCTGAGGTT 57.454 50.000 6.06 0.00 0.00 3.50
4284 4396 2.945668 CTCCAATGGAATCGGAAGTTCC 59.054 50.000 12.27 12.27 44.32 3.62
4285 4397 2.356069 GCTCCAATGGAATCGGAAGTTC 59.644 50.000 2.61 0.00 0.00 3.01
4286 4398 2.290896 TGCTCCAATGGAATCGGAAGTT 60.291 45.455 2.61 0.00 0.00 2.66
4287 4399 1.281867 TGCTCCAATGGAATCGGAAGT 59.718 47.619 2.61 0.00 0.00 3.01
4288 4400 2.042686 TGCTCCAATGGAATCGGAAG 57.957 50.000 2.61 0.00 0.00 3.46
4289 4401 2.300433 CATGCTCCAATGGAATCGGAA 58.700 47.619 2.61 0.00 0.00 4.30
4290 4402 1.212688 ACATGCTCCAATGGAATCGGA 59.787 47.619 2.61 0.00 31.46 4.55
4291 4403 1.335810 CACATGCTCCAATGGAATCGG 59.664 52.381 2.61 0.00 31.46 4.18
4292 4404 2.019249 ACACATGCTCCAATGGAATCG 58.981 47.619 2.61 0.00 31.46 3.34
4293 4405 3.018856 TCACACATGCTCCAATGGAATC 58.981 45.455 2.61 0.00 31.46 2.52
4294 4406 3.021695 CTCACACATGCTCCAATGGAAT 58.978 45.455 2.61 0.00 31.46 3.01
4295 4407 2.439409 CTCACACATGCTCCAATGGAA 58.561 47.619 2.61 0.00 31.46 3.53
4296 4408 1.951895 GCTCACACATGCTCCAATGGA 60.952 52.381 0.48 0.48 31.46 3.41
4297 4409 0.454600 GCTCACACATGCTCCAATGG 59.545 55.000 0.00 0.00 31.46 3.16
4298 4410 0.454600 GGCTCACACATGCTCCAATG 59.545 55.000 0.00 0.00 0.00 2.82
4299 4411 0.038599 TGGCTCACACATGCTCCAAT 59.961 50.000 0.00 0.00 0.00 3.16
4397 4538 7.814587 GCAGCTTTGGTGATTAGTTCTAATTTT 59.185 33.333 6.54 0.00 32.22 1.82
4401 4542 4.700213 GGCAGCTTTGGTGATTAGTTCTAA 59.300 41.667 0.66 0.00 32.22 2.10
4402 4543 4.261801 GGCAGCTTTGGTGATTAGTTCTA 58.738 43.478 0.66 0.00 32.22 2.10
4403 4544 3.084786 GGCAGCTTTGGTGATTAGTTCT 58.915 45.455 0.66 0.00 32.22 3.01
4404 4545 2.819608 TGGCAGCTTTGGTGATTAGTTC 59.180 45.455 0.66 0.00 32.22 3.01
4405 4546 2.558359 GTGGCAGCTTTGGTGATTAGTT 59.442 45.455 0.66 0.00 32.22 2.24
4406 4547 2.162681 GTGGCAGCTTTGGTGATTAGT 58.837 47.619 0.66 0.00 32.22 2.24
4407 4548 2.161855 TGTGGCAGCTTTGGTGATTAG 58.838 47.619 0.66 0.00 32.22 1.73
4408 4549 2.284754 TGTGGCAGCTTTGGTGATTA 57.715 45.000 0.66 0.00 32.22 1.75
4409 4550 1.636148 ATGTGGCAGCTTTGGTGATT 58.364 45.000 0.66 0.00 32.22 2.57
4410 4551 2.512692 TATGTGGCAGCTTTGGTGAT 57.487 45.000 0.66 0.00 32.22 3.06
4411 4552 2.284754 TTATGTGGCAGCTTTGGTGA 57.715 45.000 0.66 0.00 32.22 4.02
4412 4553 2.927871 GCTTTATGTGGCAGCTTTGGTG 60.928 50.000 0.00 0.00 0.00 4.17
4413 4554 1.273327 GCTTTATGTGGCAGCTTTGGT 59.727 47.619 0.00 0.00 0.00 3.67
4414 4555 1.273048 TGCTTTATGTGGCAGCTTTGG 59.727 47.619 0.00 0.00 34.42 3.28
4415 4556 2.728690 TGCTTTATGTGGCAGCTTTG 57.271 45.000 0.00 0.00 34.42 2.77
4416 4557 3.749665 TTTGCTTTATGTGGCAGCTTT 57.250 38.095 0.00 0.00 39.68 3.51
4417 4558 3.749665 TTTTGCTTTATGTGGCAGCTT 57.250 38.095 0.00 0.00 39.68 3.74
4418 4559 3.749665 TTTTTGCTTTATGTGGCAGCT 57.250 38.095 0.00 0.00 39.68 4.24
4419 4560 3.995705 TCATTTTTGCTTTATGTGGCAGC 59.004 39.130 0.00 0.00 39.68 5.25
4420 4561 5.927689 TCTTCATTTTTGCTTTATGTGGCAG 59.072 36.000 0.00 0.00 39.68 4.85
4421 4562 5.851720 TCTTCATTTTTGCTTTATGTGGCA 58.148 33.333 0.00 0.00 36.62 4.92
4422 4563 6.783892 TTCTTCATTTTTGCTTTATGTGGC 57.216 33.333 0.00 0.00 0.00 5.01
4447 4588 9.696917 CAGCTTTGGTGATTAGTTCTAAATTTT 57.303 29.630 0.00 0.00 32.22 1.82
4448 4589 7.814587 GCAGCTTTGGTGATTAGTTCTAAATTT 59.185 33.333 0.00 0.00 32.22 1.82
4449 4590 7.315890 GCAGCTTTGGTGATTAGTTCTAAATT 58.684 34.615 0.66 0.00 32.22 1.82
4450 4591 6.127619 GGCAGCTTTGGTGATTAGTTCTAAAT 60.128 38.462 0.66 0.00 32.22 1.40
4451 4592 5.183140 GGCAGCTTTGGTGATTAGTTCTAAA 59.817 40.000 0.66 0.00 32.22 1.85
4452 4593 4.700213 GGCAGCTTTGGTGATTAGTTCTAA 59.300 41.667 0.66 0.00 32.22 2.10
4472 4613 2.040947 TGGTCCAGTTATCACATTGGCA 59.959 45.455 0.00 0.00 0.00 4.92
4497 4638 4.446051 GGTCGATCAGATAAGCTAGCAAAC 59.554 45.833 18.83 3.31 0.00 2.93
4682 4908 2.618709 CCAAACCACAGACTTGTCCTTC 59.381 50.000 0.00 0.00 34.62 3.46
4844 5070 4.880120 ACATCTTCAACAGTGCTATCATGG 59.120 41.667 0.00 0.00 0.00 3.66
5151 5379 7.715657 ACTTCTTGCAAGAAACAATGTTGATA 58.284 30.769 34.71 14.28 43.84 2.15
5152 5380 6.576185 ACTTCTTGCAAGAAACAATGTTGAT 58.424 32.000 34.71 13.69 43.84 2.57
5394 5679 3.562609 GGTCAAGGGGGCATGTTTAGTAA 60.563 47.826 0.00 0.00 0.00 2.24
5395 5680 2.025699 GGTCAAGGGGGCATGTTTAGTA 60.026 50.000 0.00 0.00 0.00 1.82
5442 5727 6.209589 TGACTAAGAGCATGTTCAGTACTCTT 59.790 38.462 12.41 12.33 46.50 2.85
5447 5732 5.722021 TGTGACTAAGAGCATGTTCAGTA 57.278 39.130 12.41 2.96 0.00 2.74
5486 5771 2.681344 CAAAAGAACCATACTACCCGGC 59.319 50.000 0.00 0.00 0.00 6.13
5487 5772 3.946606 ACAAAAGAACCATACTACCCGG 58.053 45.455 0.00 0.00 0.00 5.73
5619 5905 5.084519 TCTAGTTGACTGTAATCCCAGTGT 58.915 41.667 0.00 0.00 45.46 3.55
5620 5906 5.661056 TCTAGTTGACTGTAATCCCAGTG 57.339 43.478 0.00 0.00 45.46 3.66
5663 6027 4.023707 CAGCCTCTTTACACCAAGACAAAG 60.024 45.833 0.00 0.00 0.00 2.77
5924 6299 6.647334 TTGACAAACATAGATGAAAAGCCA 57.353 33.333 0.00 0.00 0.00 4.75
5990 6480 6.671614 TGTTTTAGCGACAAGTAATATGGG 57.328 37.500 0.00 0.00 0.00 4.00
6060 6550 6.652205 ACTCCCTCCAATCCAAATTACTTA 57.348 37.500 0.00 0.00 0.00 2.24
6063 6553 4.814771 CGTACTCCCTCCAATCCAAATTAC 59.185 45.833 0.00 0.00 0.00 1.89
6193 6683 8.153550 AGAAACCACCATAATTAAATGTGCAAA 58.846 29.630 0.00 0.00 0.00 3.68
6310 6801 1.076777 GGCAGCTTTATGGCCCTCA 60.077 57.895 0.00 0.00 41.90 3.86
6351 6842 2.452600 TGTGGCCAAAAGGTTCTCTT 57.547 45.000 7.24 0.00 37.28 2.85
6370 6861 8.906867 CCATATCCACATGAAAAGAACAAGTAT 58.093 33.333 0.00 0.00 0.00 2.12
6374 6865 6.718912 TGTCCATATCCACATGAAAAGAACAA 59.281 34.615 0.00 0.00 0.00 2.83
6413 6904 7.944729 AGCACAAGGTATGAATTATTGAACT 57.055 32.000 0.00 0.00 0.00 3.01
6414 6905 8.986477 AAAGCACAAGGTATGAATTATTGAAC 57.014 30.769 0.00 0.00 0.00 3.18
6529 7039 0.036010 AAGTGAACTCCCATCGCCAG 60.036 55.000 0.00 0.00 0.00 4.85
6731 7242 2.498078 TCAAGAAAAAGCCGGGTTTTGT 59.502 40.909 37.14 27.45 29.93 2.83
6737 7248 1.618343 ACCATTCAAGAAAAAGCCGGG 59.382 47.619 2.18 0.00 0.00 5.73
6813 7325 8.896320 TGTTTACTAAATTAGTCTGCTTGTGA 57.104 30.769 9.17 0.00 40.14 3.58
6815 7327 9.502091 TCATGTTTACTAAATTAGTCTGCTTGT 57.498 29.630 9.17 0.00 40.14 3.16
6816 7328 9.979270 CTCATGTTTACTAAATTAGTCTGCTTG 57.021 33.333 9.17 8.87 40.14 4.01
6817 7329 9.944376 TCTCATGTTTACTAAATTAGTCTGCTT 57.056 29.630 9.17 0.00 40.14 3.91
6930 7602 9.632638 AATATGGTGTAGACTGAAATAATGCTT 57.367 29.630 0.00 0.00 0.00 3.91
7035 7711 5.530519 ACGTGCACAAGTAGACATAAATG 57.469 39.130 18.64 0.00 0.00 2.32
7109 7787 0.394352 AAGCCCTCATTAAGCCCGTG 60.394 55.000 0.00 0.00 0.00 4.94
7191 7869 3.270877 GTTTTATCGTCCCTGCACATCT 58.729 45.455 0.00 0.00 0.00 2.90
7367 8048 1.237285 CCTGCAAAGTTCCACCTCCG 61.237 60.000 0.00 0.00 0.00 4.63
7551 8234 7.410120 TGATGATACAGTGCCGATATATTCT 57.590 36.000 0.00 0.00 0.00 2.40
7590 8318 9.853177 ATTTTGGGAAGGAGTACTATTAAGATG 57.147 33.333 0.00 0.00 0.00 2.90
7628 8360 6.203338 GTCCCAAAATAAGTGTCGTTGACTTA 59.797 38.462 0.00 0.00 39.60 2.24
7675 8407 3.967332 TTTCTTTACAGGGGGAGTACG 57.033 47.619 0.00 0.00 0.00 3.67
7704 8436 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
7705 8437 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
7709 8476 7.672122 ATAAGTACTCCCTCCGTAAAGAAAT 57.328 36.000 0.00 0.00 0.00 2.17
7829 8596 4.130118 GGCGGTAGATCAAATCACTCATT 58.870 43.478 0.00 0.00 0.00 2.57
7923 8690 8.397575 TGGACAGATAACTACTATCTCATGAC 57.602 38.462 0.00 0.00 44.23 3.06
8137 8904 3.535561 ACAAGCAATCTCATAAGGTCCG 58.464 45.455 0.00 0.00 0.00 4.79
8222 9650 3.817647 AGCAACTAGACAGGCTCAAAAAG 59.182 43.478 0.00 0.00 28.71 2.27
8233 9661 9.555727 AATTGTTAAGTAAGAAGCAACTAGACA 57.444 29.630 0.00 0.00 0.00 3.41
8253 9681 9.881529 GCAACAACATGATCAATAAAAATTGTT 57.118 25.926 0.00 0.00 38.04 2.83
8336 9764 2.634600 ACAGTTAACGTGACCAAAGCA 58.365 42.857 10.71 0.00 0.00 3.91
8351 9779 3.569701 CCCATACAAACTCAGCAACAGTT 59.430 43.478 0.00 0.00 35.51 3.16
8388 9847 3.716006 CCACGGCACAGTGAAGCG 61.716 66.667 4.15 0.44 44.43 4.68
8392 9851 2.290008 ACAATATTCCACGGCACAGTGA 60.290 45.455 4.15 0.00 44.43 3.41
8421 9880 6.426633 TGCCGTCACATTAACCATATTAGATG 59.573 38.462 0.00 0.00 0.00 2.90
8426 9885 5.906113 TTTGCCGTCACATTAACCATATT 57.094 34.783 0.00 0.00 0.00 1.28
8489 9953 3.250040 GCTTTGTACCACGAAACACATCT 59.750 43.478 0.00 0.00 0.00 2.90
8495 9959 0.236449 CCCGCTTTGTACCACGAAAC 59.764 55.000 0.00 0.00 0.00 2.78
8522 9986 1.813753 CTCACCCCGCACATTACCG 60.814 63.158 0.00 0.00 0.00 4.02
8527 9991 3.637911 TTTTATACTCACCCCGCACAT 57.362 42.857 0.00 0.00 0.00 3.21
8528 9992 3.637911 ATTTTATACTCACCCCGCACA 57.362 42.857 0.00 0.00 0.00 4.57
8531 9995 5.869888 CAGATCTATTTTATACTCACCCCGC 59.130 44.000 0.00 0.00 0.00 6.13
8533 9997 6.651225 GCACAGATCTATTTTATACTCACCCC 59.349 42.308 0.00 0.00 0.00 4.95
8534 9998 7.386299 CAGCACAGATCTATTTTATACTCACCC 59.614 40.741 0.00 0.00 0.00 4.61
8535 9999 7.928706 ACAGCACAGATCTATTTTATACTCACC 59.071 37.037 0.00 0.00 0.00 4.02
8536 10000 8.879342 ACAGCACAGATCTATTTTATACTCAC 57.121 34.615 0.00 0.00 0.00 3.51
8563 10092 7.147949 CCTCTTAATCTGATGCACAAGGATTTT 60.148 37.037 9.99 0.00 30.04 1.82
8565 10094 5.826737 CCTCTTAATCTGATGCACAAGGATT 59.173 40.000 0.00 0.00 31.49 3.01
8566 10095 5.104193 ACCTCTTAATCTGATGCACAAGGAT 60.104 40.000 11.17 0.00 0.00 3.24
8567 10096 4.225942 ACCTCTTAATCTGATGCACAAGGA 59.774 41.667 11.17 0.00 0.00 3.36
8569 10098 6.765036 ACATACCTCTTAATCTGATGCACAAG 59.235 38.462 0.00 0.00 0.00 3.16
8572 10101 6.051717 ACACATACCTCTTAATCTGATGCAC 58.948 40.000 0.00 0.00 0.00 4.57
8573 10102 6.239217 ACACATACCTCTTAATCTGATGCA 57.761 37.500 0.00 0.00 0.00 3.96
8583 10112 7.703621 GCACGAATTTACTACACATACCTCTTA 59.296 37.037 0.00 0.00 0.00 2.10
8584 10113 6.534079 GCACGAATTTACTACACATACCTCTT 59.466 38.462 0.00 0.00 0.00 2.85
8585 10114 6.040878 GCACGAATTTACTACACATACCTCT 58.959 40.000 0.00 0.00 0.00 3.69
8586 10115 6.040878 AGCACGAATTTACTACACATACCTC 58.959 40.000 0.00 0.00 0.00 3.85
8588 10117 6.238022 GGAAGCACGAATTTACTACACATACC 60.238 42.308 0.00 0.00 0.00 2.73
8589 10118 6.507456 CGGAAGCACGAATTTACTACACATAC 60.507 42.308 0.00 0.00 35.47 2.39
8591 10120 4.328983 CGGAAGCACGAATTTACTACACAT 59.671 41.667 0.00 0.00 35.47 3.21
8593 10122 4.240883 CGGAAGCACGAATTTACTACAC 57.759 45.455 0.00 0.00 35.47 2.90
8638 13513 4.518211 GGACAAGATAGATGCCCTTCAATG 59.482 45.833 0.00 0.00 0.00 2.82
8774 13649 3.075005 GTGCCTCGACCTGCCCTA 61.075 66.667 0.00 0.00 0.00 3.53
8876 13758 6.469782 AATATGCCATCCAGGTTTTAACAG 57.530 37.500 0.00 0.00 40.61 3.16
8886 13768 3.190744 CAGCAAGCTAATATGCCATCCAG 59.809 47.826 4.49 0.00 43.57 3.86
8901 13783 0.666913 ATCATTCCGATGCAGCAAGC 59.333 50.000 1.53 0.00 45.96 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.