Multiple sequence alignment - TraesCS3D01G249600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G249600 chr3D 100.000 4325 0 0 1 4325 349670044 349665720 0.000000e+00 7987.0
1 TraesCS3D01G249600 chr3B 92.364 2606 138 34 861 3435 448589986 448587411 0.000000e+00 3653.0
2 TraesCS3D01G249600 chr3B 92.650 517 26 6 1 514 448590849 448590342 0.000000e+00 734.0
3 TraesCS3D01G249600 chr3B 93.333 60 3 1 780 838 448590047 448589988 2.140000e-13 87.9
4 TraesCS3D01G249600 chr3A 79.310 754 114 26 102 835 467901436 467900705 1.400000e-134 490.0
5 TraesCS3D01G249600 chr1D 78.931 636 122 12 3525 4154 483140892 483140263 5.170000e-114 422.0
6 TraesCS3D01G249600 chr7B 90.654 107 10 0 1 107 682925389 682925283 4.510000e-30 143.0
7 TraesCS3D01G249600 chr2B 91.579 95 8 0 1 95 117787298 117787392 9.760000e-27 132.0
8 TraesCS3D01G249600 chr2B 97.727 44 1 0 1 44 5807775 5807818 4.640000e-10 76.8
9 TraesCS3D01G249600 chr5D 82.456 114 11 6 2952 3065 41037974 41037870 1.660000e-14 91.6
10 TraesCS3D01G249600 chr1B 84.783 92 11 2 418 508 187212639 187212550 5.960000e-14 89.8
11 TraesCS3D01G249600 chr4A 100.000 28 0 0 4285 4312 471710929 471710902 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G249600 chr3D 349665720 349670044 4324 True 7987.000000 7987 100.000000 1 4325 1 chr3D.!!$R1 4324
1 TraesCS3D01G249600 chr3B 448587411 448590849 3438 True 1491.633333 3653 92.782333 1 3435 3 chr3B.!!$R1 3434
2 TraesCS3D01G249600 chr3A 467900705 467901436 731 True 490.000000 490 79.310000 102 835 1 chr3A.!!$R1 733
3 TraesCS3D01G249600 chr1D 483140263 483140892 629 True 422.000000 422 78.931000 3525 4154 1 chr1D.!!$R1 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 726 0.036952 CAGGCACTCGTGATTGGAGT 60.037 55.0 0.39 0.00 45.26 3.85 F
1772 2050 0.031585 CATTGCCATTCATGAGCCCG 59.968 55.0 0.00 0.00 0.00 6.13 F
2673 2962 0.106769 TGCGAGGTATACCCGTGGTA 60.107 55.0 24.45 5.42 42.80 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2680 2969 0.106868 CCTGAGGCTGCCATTGATGA 60.107 55.0 22.65 0.0 0.00 2.92 R
2914 3203 0.319383 ATGATCATCGCAGCCGTCTC 60.319 55.0 1.18 0.0 35.54 3.36 R
3808 4105 0.035458 CTTCCACTCTTGAACCCGCT 59.965 55.0 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 5.642919 GCATGATGAGAAGATGATCTTACCC 59.357 44.000 7.82 1.30 36.73 3.69
45 46 6.743490 GCATGATGAGAAGATGATCTTACCCA 60.743 42.308 7.82 6.85 36.73 4.51
50 51 6.409704 TGAGAAGATGATCTTACCCAAACTG 58.590 40.000 7.82 0.00 36.73 3.16
70 71 1.153168 CCCGCAGAATCATTCCGGT 60.153 57.895 12.46 0.00 37.37 5.28
95 96 4.473520 ATTCCGGTGGAGGCGCAG 62.474 66.667 10.83 0.00 31.21 5.18
143 144 6.753180 ACATAGTATGCTTGTATGTCTGAGG 58.247 40.000 10.16 0.00 33.04 3.86
173 174 9.863650 TTACCTCTACTGCTACTTAGTTATCAT 57.136 33.333 0.00 0.00 0.00 2.45
202 203 4.624882 GCTTCGGTGCTGATAGATATCTTG 59.375 45.833 11.25 0.89 33.88 3.02
253 254 9.220767 CTAAGTCAATTCCTTGCTTAGTTACTT 57.779 33.333 14.51 0.00 40.10 2.24
315 329 7.827819 TGTGTTCAGAGATTTACTATTTCCG 57.172 36.000 0.00 0.00 0.00 4.30
522 538 3.899531 CGGTTTGCGAAAAATTTGAATGC 59.100 39.130 0.00 0.00 0.00 3.56
523 539 3.899531 GGTTTGCGAAAAATTTGAATGCG 59.100 39.130 0.00 0.00 0.00 4.73
524 540 2.852322 TGCGAAAAATTTGAATGCGC 57.148 40.000 0.00 0.00 42.87 6.09
525 541 2.402305 TGCGAAAAATTTGAATGCGCT 58.598 38.095 9.73 0.00 42.97 5.92
552 568 1.275657 CACAGACGTTTGCGACACC 59.724 57.895 5.91 0.00 42.00 4.16
555 571 0.935831 CAGACGTTTGCGACACCGTA 60.936 55.000 0.00 0.00 42.00 4.02
556 572 0.248990 AGACGTTTGCGACACCGTAA 60.249 50.000 0.00 0.00 42.00 3.18
563 579 0.461163 TGCGACACCGTAATGGATGG 60.461 55.000 0.00 0.00 42.00 3.51
566 582 2.739287 GCGACACCGTAATGGATGGTAA 60.739 50.000 0.00 0.00 46.56 2.85
569 585 4.033587 CGACACCGTAATGGATGGTAAAAG 59.966 45.833 0.00 0.00 46.56 2.27
572 588 6.184789 ACACCGTAATGGATGGTAAAAGAAT 58.815 36.000 0.00 0.00 46.56 2.40
578 594 9.677567 CGTAATGGATGGTAAAAGAATATTTGG 57.322 33.333 0.00 0.00 0.00 3.28
591 607 3.691049 ATATTTGGATGCGTTGGTTCG 57.309 42.857 0.00 0.00 0.00 3.95
592 608 0.525761 ATTTGGATGCGTTGGTTCGG 59.474 50.000 0.00 0.00 0.00 4.30
595 611 1.669760 GGATGCGTTGGTTCGGACA 60.670 57.895 0.00 0.00 33.59 4.02
602 618 1.600013 CGTTGGTTCGGACATTTGTGA 59.400 47.619 0.00 0.00 0.00 3.58
610 626 5.640357 GGTTCGGACATTTGTGAGTGTTATA 59.360 40.000 0.00 0.00 0.00 0.98
611 627 6.148150 GGTTCGGACATTTGTGAGTGTTATAA 59.852 38.462 0.00 0.00 0.00 0.98
618 634 6.093495 ACATTTGTGAGTGTTATAATGGACGG 59.907 38.462 0.00 0.00 0.00 4.79
623 639 6.101332 GTGAGTGTTATAATGGACGGTGTTA 58.899 40.000 0.00 0.00 0.00 2.41
625 641 6.153170 TGAGTGTTATAATGGACGGTGTTAGA 59.847 38.462 0.00 0.00 0.00 2.10
649 665 2.760634 CCCTTAAATTGGTGGGCAAC 57.239 50.000 0.00 0.00 32.49 4.17
670 689 2.185608 GGAGAGCTCCCGCAAGTC 59.814 66.667 10.93 0.00 43.94 3.01
686 705 2.281484 TCTGACCCACTTTGGCGC 60.281 61.111 0.00 0.00 35.79 6.53
690 709 2.281761 ACCCACTTTGGCGCTCAG 60.282 61.111 7.64 3.17 35.79 3.35
700 719 4.724602 GCGCTCAGGCACTCGTGA 62.725 66.667 0.00 0.00 34.60 4.35
701 720 2.182791 CGCTCAGGCACTCGTGAT 59.817 61.111 0.39 0.00 34.60 3.06
702 721 1.446792 CGCTCAGGCACTCGTGATT 60.447 57.895 0.39 0.00 34.60 2.57
703 722 1.690283 CGCTCAGGCACTCGTGATTG 61.690 60.000 0.39 0.00 34.60 2.67
704 723 1.364626 GCTCAGGCACTCGTGATTGG 61.365 60.000 0.39 0.00 34.60 3.16
705 724 0.247460 CTCAGGCACTCGTGATTGGA 59.753 55.000 0.39 0.00 34.60 3.53
706 725 0.247460 TCAGGCACTCGTGATTGGAG 59.753 55.000 0.39 0.00 34.60 3.86
707 726 0.036952 CAGGCACTCGTGATTGGAGT 60.037 55.000 0.39 0.00 45.26 3.85
708 727 1.204704 CAGGCACTCGTGATTGGAGTA 59.795 52.381 0.39 0.00 42.63 2.59
709 728 1.899814 AGGCACTCGTGATTGGAGTAA 59.100 47.619 0.39 0.00 42.63 2.24
710 729 2.501723 AGGCACTCGTGATTGGAGTAAT 59.498 45.455 0.39 0.00 42.63 1.89
711 730 3.055094 AGGCACTCGTGATTGGAGTAATT 60.055 43.478 0.39 0.00 42.63 1.40
712 731 3.689649 GGCACTCGTGATTGGAGTAATTT 59.310 43.478 0.39 0.00 42.63 1.82
713 732 4.156008 GGCACTCGTGATTGGAGTAATTTT 59.844 41.667 0.39 0.00 42.63 1.82
714 733 5.324697 GCACTCGTGATTGGAGTAATTTTC 58.675 41.667 0.39 0.00 42.63 2.29
715 734 5.122396 GCACTCGTGATTGGAGTAATTTTCT 59.878 40.000 0.39 0.00 42.63 2.52
716 735 6.348540 GCACTCGTGATTGGAGTAATTTTCTT 60.349 38.462 0.39 0.00 42.63 2.52
717 736 7.237173 CACTCGTGATTGGAGTAATTTTCTTC 58.763 38.462 0.00 0.00 42.63 2.87
718 737 7.118390 CACTCGTGATTGGAGTAATTTTCTTCT 59.882 37.037 0.00 0.00 42.63 2.85
719 738 7.661847 ACTCGTGATTGGAGTAATTTTCTTCTT 59.338 33.333 0.00 0.00 42.69 2.52
720 739 8.029642 TCGTGATTGGAGTAATTTTCTTCTTC 57.970 34.615 0.00 0.00 0.00 2.87
721 740 7.878127 TCGTGATTGGAGTAATTTTCTTCTTCT 59.122 33.333 0.00 0.00 0.00 2.85
722 741 8.507249 CGTGATTGGAGTAATTTTCTTCTTCTT 58.493 33.333 0.00 0.00 0.00 2.52
723 742 9.833182 GTGATTGGAGTAATTTTCTTCTTCTTC 57.167 33.333 0.00 0.00 0.00 2.87
757 777 8.311109 TCTTCTTCTTGTTTTTAGCAGGTTTTT 58.689 29.630 0.00 0.00 0.00 1.94
868 1129 7.538303 ACACACACACACACACATATATATG 57.462 36.000 19.21 19.21 39.55 1.78
870 1131 7.277760 ACACACACACACACACATATATATGAC 59.722 37.037 26.05 0.00 37.15 3.06
1051 1313 6.640499 TGTTCATGAATTTCGAAAATGTCCAC 59.360 34.615 15.66 12.19 0.00 4.02
1065 1327 7.518689 CGAAAATGTCCACGAACTAAAAAGGTA 60.519 37.037 0.00 0.00 0.00 3.08
1154 1423 9.893305 AAAATAGATTAGAAAACCGTGAAAGTG 57.107 29.630 0.00 0.00 0.00 3.16
1155 1424 5.941948 AGATTAGAAAACCGTGAAAGTGG 57.058 39.130 0.00 0.00 0.00 4.00
1156 1425 4.760204 AGATTAGAAAACCGTGAAAGTGGG 59.240 41.667 0.00 0.00 0.00 4.61
1157 1426 2.430248 AGAAAACCGTGAAAGTGGGT 57.570 45.000 0.00 0.00 34.99 4.51
1158 1427 2.294979 AGAAAACCGTGAAAGTGGGTC 58.705 47.619 0.00 0.00 32.47 4.46
1159 1428 2.018515 GAAAACCGTGAAAGTGGGTCA 58.981 47.619 0.00 0.00 32.47 4.02
1160 1429 1.385528 AAACCGTGAAAGTGGGTCAC 58.614 50.000 0.00 0.00 41.66 3.67
1161 1430 0.253610 AACCGTGAAAGTGGGTCACA 59.746 50.000 5.50 0.00 44.66 3.58
1172 1441 3.802948 GTGGGTCACACTAGTCCATAG 57.197 52.381 0.00 0.00 46.72 2.23
1173 1442 3.362706 GTGGGTCACACTAGTCCATAGA 58.637 50.000 0.00 0.00 46.72 1.98
1190 1459 6.581166 GTCCATAGAAAACCGCTAAAACAAAG 59.419 38.462 0.00 0.00 0.00 2.77
1200 1469 5.105675 ACCGCTAAAACAAAGAGAAAAACCA 60.106 36.000 0.00 0.00 0.00 3.67
1246 1515 6.058183 AGAGAACAAAATTGCTCACACTAGT 58.942 36.000 0.00 0.00 0.00 2.57
1298 1567 1.016627 GTGCTCGCCTATGCAATTGA 58.983 50.000 10.34 0.00 41.10 2.57
1315 1584 2.515057 ACCGTCAACTTGCCGCAA 60.515 55.556 5.52 5.52 0.00 4.85
1327 1596 2.945984 CCGCAATGAGCAACGTGT 59.054 55.556 0.00 0.00 46.13 4.49
1334 1603 4.578601 GCAATGAGCAACGTGTATAGAAC 58.421 43.478 0.00 0.00 44.79 3.01
1339 1608 6.795098 TGAGCAACGTGTATAGAACATTTT 57.205 33.333 0.00 0.00 41.10 1.82
1488 1758 9.619316 TTTTCATTACAGGTATGTGAAATTTCG 57.381 29.630 13.34 0.00 40.79 3.46
1548 1818 2.183679 AGAAACTGGCCCAACAACAAA 58.816 42.857 0.00 0.00 0.00 2.83
1549 1819 2.569404 AGAAACTGGCCCAACAACAAAA 59.431 40.909 0.00 0.00 0.00 2.44
1550 1820 3.008485 AGAAACTGGCCCAACAACAAAAA 59.992 39.130 0.00 0.00 0.00 1.94
1769 2047 1.852942 CAGCATTGCCATTCATGAGC 58.147 50.000 4.70 0.00 0.00 4.26
1772 2050 0.031585 CATTGCCATTCATGAGCCCG 59.968 55.000 0.00 0.00 0.00 6.13
1827 2105 1.673665 GGCACTGTTCAGGAGCCAG 60.674 63.158 23.47 0.00 44.59 4.85
1830 2108 2.045536 CTGTTCAGGAGCCAGCCC 60.046 66.667 0.00 0.00 0.00 5.19
1833 2111 0.913934 TGTTCAGGAGCCAGCCCATA 60.914 55.000 0.00 0.00 0.00 2.74
1834 2112 0.179034 GTTCAGGAGCCAGCCCATAG 60.179 60.000 0.00 0.00 0.00 2.23
1835 2113 0.621571 TTCAGGAGCCAGCCCATAGT 60.622 55.000 0.00 0.00 0.00 2.12
1836 2114 0.264657 TCAGGAGCCAGCCCATAGTA 59.735 55.000 0.00 0.00 0.00 1.82
1837 2115 1.131638 CAGGAGCCAGCCCATAGTAA 58.868 55.000 0.00 0.00 0.00 2.24
2014 2298 1.488957 CGAAGTGCAGCACGAAGAC 59.511 57.895 19.96 9.56 39.64 3.01
2033 2317 1.625818 ACCAACGAGGAGATCTTTGCT 59.374 47.619 0.00 0.00 41.22 3.91
2042 2326 4.339748 AGGAGATCTTTGCTTCCTTTTCC 58.660 43.478 0.00 0.00 0.00 3.13
2050 2334 4.272511 TTCCTTTTCCCGCCGCCA 62.273 61.111 0.00 0.00 0.00 5.69
2105 2389 2.990479 GGACGCACCCTCCTTCAT 59.010 61.111 0.00 0.00 0.00 2.57
2155 2439 1.399440 CCTCATCCTGTTCAACGCATG 59.601 52.381 0.00 0.00 0.00 4.06
2167 2451 2.741985 CGCATGCGTTGGGTCTGA 60.742 61.111 31.33 0.00 33.74 3.27
2169 2453 1.723870 GCATGCGTTGGGTCTGATC 59.276 57.895 0.00 0.00 0.00 2.92
2213 2500 1.172175 GGGACTTCTTCGTCTACCGT 58.828 55.000 0.00 0.00 37.94 4.83
2269 2556 3.499737 CCCGCACACTCCGATTGC 61.500 66.667 0.00 0.00 0.00 3.56
2285 2572 0.535335 TTGCCAGTATCCACGAGGTC 59.465 55.000 0.00 0.00 35.89 3.85
2296 2583 3.771491 CGAGGTCGTCGTCGTCGT 61.771 66.667 20.84 0.00 44.20 4.34
2345 2632 2.357760 GCGCTTGTTCCCCACGTA 60.358 61.111 0.00 0.00 0.00 3.57
2349 2636 1.562575 GCTTGTTCCCCACGTACACG 61.563 60.000 0.00 0.00 46.33 4.49
2374 2663 0.550914 AGCAGTTTTGTCCTCCACCA 59.449 50.000 0.00 0.00 0.00 4.17
2379 2668 1.602377 GTTTTGTCCTCCACCAGTTCG 59.398 52.381 0.00 0.00 0.00 3.95
2380 2669 1.124780 TTTGTCCTCCACCAGTTCGA 58.875 50.000 0.00 0.00 0.00 3.71
2453 2742 2.121538 GCCTTTCCCGGAGCCAATC 61.122 63.158 0.73 0.00 0.00 2.67
2474 2763 1.427809 CCATGGACCTCAGCCAGATA 58.572 55.000 5.56 0.00 39.11 1.98
2497 2786 1.292061 TACCACACGACAAACTGTGC 58.708 50.000 0.00 0.00 39.71 4.57
2540 2829 2.362503 TGGGTCGATCTCTGGCGT 60.363 61.111 0.00 0.00 0.00 5.68
2589 2878 1.289066 GAGCGTACACTCACTGGCA 59.711 57.895 6.02 0.00 36.65 4.92
2672 2961 0.757935 ATGCGAGGTATACCCGTGGT 60.758 55.000 24.45 7.34 40.16 4.16
2673 2962 0.106769 TGCGAGGTATACCCGTGGTA 60.107 55.000 24.45 5.42 42.80 3.25
2678 2967 3.305608 CGAGGTATACCCGTGGTATTTCC 60.306 52.174 18.65 17.81 45.54 3.13
2680 2969 4.301205 AGGTATACCCGTGGTATTTCCTT 58.699 43.478 18.65 9.78 45.54 3.36
2691 2980 4.402155 GTGGTATTTCCTTCATCAATGGCA 59.598 41.667 0.00 0.00 37.07 4.92
2705 2994 0.610232 ATGGCAGCCTCAGGTTTGTC 60.610 55.000 14.15 0.00 0.00 3.18
2724 3013 1.806542 TCGAGCTGCAATTTGAAGTCC 59.193 47.619 6.26 0.00 0.00 3.85
2776 3065 1.814169 GGTGGCCGATCTCCGAAAC 60.814 63.158 0.00 0.00 41.76 2.78
2803 3092 0.980423 TGGACGATCACCACATGGAA 59.020 50.000 4.53 0.00 38.94 3.53
2808 3097 7.318278 TGGACGATCACCACATGGAACAATA 62.318 44.000 4.53 0.00 35.22 1.90
2822 3111 4.125703 GGAACAATAGAGGCATGAGTGAG 58.874 47.826 0.00 0.00 0.00 3.51
2826 3115 3.749665 ATAGAGGCATGAGTGAGCTTC 57.250 47.619 0.00 0.00 37.15 3.86
2876 3165 1.201965 CGAGCTTCCGAAATTGCTGTC 60.202 52.381 0.00 0.00 35.76 3.51
2912 3201 1.545136 TCTGAGCTCTCACTTCTGCTG 59.455 52.381 16.19 0.00 35.76 4.41
2914 3203 1.077645 GAGCTCTCACTTCTGCTGCG 61.078 60.000 6.43 0.00 35.76 5.18
2966 3255 1.968540 GCGAGGCTTGCAGAACCTT 60.969 57.895 21.86 0.00 32.67 3.50
3083 3372 7.040494 AGTCATGGATTCTCGCTATTGATATG 58.960 38.462 0.00 0.00 0.00 1.78
3096 3385 5.471456 GCTATTGATATGAAGAACCACAGGG 59.529 44.000 0.00 0.00 41.29 4.45
3140 3429 3.046374 TCCTCTACCTAAAGGATTGCCC 58.954 50.000 2.23 0.00 36.75 5.36
3185 3474 6.404623 GCACTTGCATTATCTCCAAATGTACA 60.405 38.462 0.00 0.00 41.59 2.90
3207 3496 6.010219 ACAAATTAACACTCCAGCAGGTAAT 58.990 36.000 0.00 0.00 35.89 1.89
3209 3498 7.668052 ACAAATTAACACTCCAGCAGGTAATTA 59.332 33.333 0.00 0.00 35.89 1.40
3214 3503 5.918608 ACACTCCAGCAGGTAATTATACTG 58.081 41.667 13.04 13.04 35.89 2.74
3217 3506 5.215252 TCCAGCAGGTAATTATACTGCTC 57.785 43.478 29.62 13.35 40.92 4.26
3246 3535 1.085091 CCAGCACACATCTGCTTCTC 58.915 55.000 0.00 0.00 45.64 2.87
3267 3556 5.819379 TCTCTGATGCTTACATTGCTTAAGG 59.181 40.000 4.29 0.00 36.35 2.69
3270 3559 4.398988 TGATGCTTACATTGCTTAAGGGTG 59.601 41.667 4.29 0.00 36.35 4.61
3272 3561 2.159240 GCTTACATTGCTTAAGGGTGCC 60.159 50.000 4.29 0.00 0.00 5.01
3416 3713 7.779754 TTAGTACATACCACTGTTCCTGTAA 57.220 36.000 0.00 0.00 0.00 2.41
3427 3724 8.989131 ACCACTGTTCCTGTAACATATACTTAT 58.011 33.333 0.00 0.00 46.81 1.73
3442 3739 9.122779 ACATATACTTATTATCTCCTACCGAGC 57.877 37.037 0.00 0.00 38.62 5.03
3443 3740 9.344772 CATATACTTATTATCTCCTACCGAGCT 57.655 37.037 0.00 0.00 38.62 4.09
3444 3741 9.924010 ATATACTTATTATCTCCTACCGAGCTT 57.076 33.333 0.00 0.00 38.62 3.74
3446 3743 7.690952 ACTTATTATCTCCTACCGAGCTTAG 57.309 40.000 0.00 0.00 38.62 2.18
3447 3744 7.460071 ACTTATTATCTCCTACCGAGCTTAGA 58.540 38.462 0.00 0.00 38.62 2.10
3448 3745 8.110908 ACTTATTATCTCCTACCGAGCTTAGAT 58.889 37.037 0.00 0.00 38.62 1.98
3449 3746 8.880991 TTATTATCTCCTACCGAGCTTAGATT 57.119 34.615 0.00 0.00 38.62 2.40
3450 3747 7.784470 ATTATCTCCTACCGAGCTTAGATTT 57.216 36.000 0.00 0.00 38.62 2.17
3451 3748 8.880991 ATTATCTCCTACCGAGCTTAGATTTA 57.119 34.615 0.00 0.00 38.62 1.40
3452 3749 8.880991 TTATCTCCTACCGAGCTTAGATTTAT 57.119 34.615 0.00 0.00 38.62 1.40
3453 3750 6.576662 TCTCCTACCGAGCTTAGATTTATG 57.423 41.667 0.00 0.00 38.62 1.90
3454 3751 6.304624 TCTCCTACCGAGCTTAGATTTATGA 58.695 40.000 0.00 0.00 38.62 2.15
3455 3752 6.776116 TCTCCTACCGAGCTTAGATTTATGAA 59.224 38.462 0.00 0.00 38.62 2.57
3456 3753 7.451877 TCTCCTACCGAGCTTAGATTTATGAAT 59.548 37.037 0.00 0.00 38.62 2.57
3457 3754 7.963532 TCCTACCGAGCTTAGATTTATGAATT 58.036 34.615 0.00 0.00 0.00 2.17
3458 3755 9.085645 TCCTACCGAGCTTAGATTTATGAATTA 57.914 33.333 0.00 0.00 0.00 1.40
3459 3756 9.141400 CCTACCGAGCTTAGATTTATGAATTAC 57.859 37.037 0.00 0.00 0.00 1.89
3460 3757 9.915629 CTACCGAGCTTAGATTTATGAATTACT 57.084 33.333 0.00 0.00 0.00 2.24
3462 3759 9.046296 ACCGAGCTTAGATTTATGAATTACTTG 57.954 33.333 0.00 0.00 0.00 3.16
3463 3760 9.261180 CCGAGCTTAGATTTATGAATTACTTGA 57.739 33.333 0.00 0.00 0.00 3.02
3516 3813 3.140814 GGGACAATTGCCCCGCTC 61.141 66.667 14.68 0.00 39.81 5.03
3517 3814 3.140814 GGACAATTGCCCCGCTCC 61.141 66.667 5.05 0.00 0.00 4.70
3518 3815 3.140814 GACAATTGCCCCGCTCCC 61.141 66.667 5.05 0.00 0.00 4.30
3519 3816 4.759205 ACAATTGCCCCGCTCCCC 62.759 66.667 5.05 0.00 0.00 4.81
3540 3837 2.737376 GACGGCGACTCCACAACC 60.737 66.667 16.62 0.00 34.01 3.77
3541 3838 3.509137 GACGGCGACTCCACAACCA 62.509 63.158 16.62 0.00 34.01 3.67
3546 3843 2.110213 GACTCCACAACCACCGCA 59.890 61.111 0.00 0.00 0.00 5.69
3577 3874 2.126812 GCCGTAGATCTAGCCGCG 60.127 66.667 1.64 0.00 0.00 6.46
3579 3876 2.499944 CGTAGATCTAGCCGCGCG 60.500 66.667 25.67 25.67 0.00 6.86
3580 3877 2.801579 GTAGATCTAGCCGCGCGC 60.802 66.667 27.36 23.91 37.98 6.86
3581 3878 4.385093 TAGATCTAGCCGCGCGCG 62.385 66.667 43.73 43.73 44.76 6.86
3648 3945 4.371231 CCACTCCCCCTCCCCCTT 62.371 72.222 0.00 0.00 0.00 3.95
3656 3953 1.543896 CCCTCCCCCTTCCCTTTCA 60.544 63.158 0.00 0.00 0.00 2.69
3660 3957 2.167037 CCCCCTTCCCTTTCACCCA 61.167 63.158 0.00 0.00 0.00 4.51
3667 3964 2.241281 TCCCTTTCACCCACTCGATA 57.759 50.000 0.00 0.00 0.00 2.92
3668 3965 2.759355 TCCCTTTCACCCACTCGATAT 58.241 47.619 0.00 0.00 0.00 1.63
3671 3968 2.224305 CCTTTCACCCACTCGATATCCC 60.224 54.545 0.00 0.00 0.00 3.85
3674 3971 1.533273 ACCCACTCGATATCCCCCG 60.533 63.158 0.00 0.00 0.00 5.73
3676 3973 1.908793 CCACTCGATATCCCCCGCT 60.909 63.158 0.00 0.00 0.00 5.52
3677 3974 0.611062 CCACTCGATATCCCCCGCTA 60.611 60.000 0.00 0.00 0.00 4.26
3678 3975 0.811915 CACTCGATATCCCCCGCTAG 59.188 60.000 0.00 0.00 0.00 3.42
3686 3983 3.528370 CCCCCGCTAGTCCACGAG 61.528 72.222 0.00 0.00 0.00 4.18
3687 3984 4.208686 CCCCGCTAGTCCACGAGC 62.209 72.222 1.95 1.95 40.52 5.03
3688 3985 3.449227 CCCGCTAGTCCACGAGCA 61.449 66.667 11.69 0.00 43.45 4.26
3693 3990 0.528470 GCTAGTCCACGAGCACTTCT 59.472 55.000 6.92 0.00 42.91 2.85
3707 4004 2.095461 CACTTCTCGGAGATGGTGAGA 58.905 52.381 24.60 4.92 37.00 3.27
3726 4023 0.808755 ATTGATTTCACCGGTTCCGC 59.191 50.000 2.97 0.00 0.00 5.54
3749 4046 4.451150 GTGCTCATGGCGGTCGGA 62.451 66.667 0.00 0.00 45.43 4.55
3751 4048 3.838271 GCTCATGGCGGTCGGAGA 61.838 66.667 5.42 0.00 0.00 3.71
3767 4064 0.976073 GAGATCGGAGGTGGGTGGAA 60.976 60.000 0.00 0.00 0.00 3.53
3768 4065 0.546747 AGATCGGAGGTGGGTGGAAA 60.547 55.000 0.00 0.00 0.00 3.13
3770 4067 1.562672 ATCGGAGGTGGGTGGAAAGG 61.563 60.000 0.00 0.00 0.00 3.11
3789 4086 2.758327 CGACCAGGATCCGGGACA 60.758 66.667 34.48 0.00 35.27 4.02
3791 4088 1.686110 GACCAGGATCCGGGACACT 60.686 63.158 34.48 14.47 35.27 3.55
3792 4089 0.396695 GACCAGGATCCGGGACACTA 60.397 60.000 34.48 0.00 35.27 2.74
3794 4091 1.400530 CCAGGATCCGGGACACTACC 61.401 65.000 25.48 0.00 32.98 3.18
3795 4092 0.397254 CAGGATCCGGGACACTACCT 60.397 60.000 5.98 0.84 0.00 3.08
3796 4093 0.338814 AGGATCCGGGACACTACCTT 59.661 55.000 5.98 0.00 0.00 3.50
3797 4094 0.751452 GGATCCGGGACACTACCTTC 59.249 60.000 0.00 0.00 0.00 3.46
3799 4096 0.324091 ATCCGGGACACTACCTTCGT 60.324 55.000 0.00 0.00 0.00 3.85
3806 4103 2.416972 GGACACTACCTTCGTGTGGATC 60.417 54.545 0.00 0.00 44.95 3.36
3808 4105 1.548719 CACTACCTTCGTGTGGATCCA 59.451 52.381 11.44 11.44 0.00 3.41
3811 4108 1.811266 CCTTCGTGTGGATCCAGCG 60.811 63.158 24.75 24.75 0.00 5.18
3812 4109 1.811266 CTTCGTGTGGATCCAGCGG 60.811 63.158 27.91 16.04 0.00 5.52
3818 4115 1.002624 GTGGATCCAGCGGGTTCAA 60.003 57.895 16.81 1.74 35.03 2.69
3847 4144 4.101448 GGCAGATCAGGCGGTGGT 62.101 66.667 0.00 0.00 0.00 4.16
3862 4159 2.514824 GGTGGCGGCAAGAGATCC 60.515 66.667 15.50 5.63 0.00 3.36
3863 4160 2.268920 GTGGCGGCAAGAGATCCA 59.731 61.111 15.50 0.00 0.00 3.41
3866 4163 1.227497 GGCGGCAAGAGATCCAGAG 60.227 63.158 3.07 0.00 0.00 3.35
3869 4166 0.248825 CGGCAAGAGATCCAGAGACG 60.249 60.000 0.00 0.00 0.00 4.18
3875 4172 1.444119 GAGATCCAGAGACGCGAGCT 61.444 60.000 15.93 9.97 0.00 4.09
3902 4199 2.290323 GGTCAGGTATGCAGAGGTTTGT 60.290 50.000 0.00 0.00 0.00 2.83
3904 4201 2.002586 CAGGTATGCAGAGGTTTGTCG 58.997 52.381 0.00 0.00 0.00 4.35
3905 4202 1.623811 AGGTATGCAGAGGTTTGTCGT 59.376 47.619 0.00 0.00 0.00 4.34
3906 4203 2.038557 AGGTATGCAGAGGTTTGTCGTT 59.961 45.455 0.00 0.00 0.00 3.85
3907 4204 2.812011 GGTATGCAGAGGTTTGTCGTTT 59.188 45.455 0.00 0.00 0.00 3.60
3911 4208 1.264288 GCAGAGGTTTGTCGTTTGAGG 59.736 52.381 0.00 0.00 0.00 3.86
3919 4216 1.371558 GTCGTTTGAGGGCAGAGGT 59.628 57.895 0.00 0.00 0.00 3.85
3932 4229 2.038659 GCAGAGGTAGAGCAGAGGATT 58.961 52.381 0.00 0.00 0.00 3.01
3933 4230 2.433970 GCAGAGGTAGAGCAGAGGATTT 59.566 50.000 0.00 0.00 0.00 2.17
3942 4239 1.003580 AGCAGAGGATTTTGGCGAAGA 59.996 47.619 0.00 0.00 0.00 2.87
3943 4240 1.399791 GCAGAGGATTTTGGCGAAGAG 59.600 52.381 0.00 0.00 0.00 2.85
3960 4257 1.310904 GAGGATCTACGACGAAGCCT 58.689 55.000 0.00 3.86 0.00 4.58
3962 4259 1.134037 AGGATCTACGACGAAGCCTCT 60.134 52.381 0.00 0.00 0.00 3.69
3964 4261 1.671845 GATCTACGACGAAGCCTCTGT 59.328 52.381 0.00 0.00 0.00 3.41
3975 4272 2.888863 CCTCTGTGGCGGAGAGAC 59.111 66.667 12.81 0.00 39.05 3.36
3976 4273 2.487428 CTCTGTGGCGGAGAGACG 59.513 66.667 6.73 0.00 39.05 4.18
3977 4274 2.033602 TCTGTGGCGGAGAGACGA 59.966 61.111 0.00 0.00 35.47 4.20
3985 4282 1.066587 CGGAGAGACGAAGGATGCC 59.933 63.158 0.00 0.00 35.47 4.40
3997 4294 2.626510 GGATGCCTTCCTTCCCTCT 58.373 57.895 0.00 0.00 41.78 3.69
4002 4299 1.341913 GCCTTCCTTCCCTCTCTCCC 61.342 65.000 0.00 0.00 0.00 4.30
4003 4300 0.043334 CCTTCCTTCCCTCTCTCCCA 59.957 60.000 0.00 0.00 0.00 4.37
4007 4304 0.041833 CCTTCCCTCTCTCCCAGTCA 59.958 60.000 0.00 0.00 0.00 3.41
4012 4309 1.379176 CTCTCTCCCAGTCAGCCGA 60.379 63.158 0.00 0.00 0.00 5.54
4013 4310 0.754957 CTCTCTCCCAGTCAGCCGAT 60.755 60.000 0.00 0.00 0.00 4.18
4017 4314 0.250234 CTCCCAGTCAGCCGATTTCA 59.750 55.000 0.00 0.00 0.00 2.69
4019 4316 1.134401 TCCCAGTCAGCCGATTTCATC 60.134 52.381 0.00 0.00 0.00 2.92
4020 4317 1.303309 CCAGTCAGCCGATTTCATCC 58.697 55.000 0.00 0.00 0.00 3.51
4021 4318 1.407299 CCAGTCAGCCGATTTCATCCA 60.407 52.381 0.00 0.00 0.00 3.41
4032 4329 1.198094 TTTCATCCAGTGGGCGAGGA 61.198 55.000 9.92 0.00 35.59 3.71
4043 4340 4.430765 GCGAGGACGGAGGCGAAA 62.431 66.667 0.00 0.00 40.15 3.46
4046 4343 1.227292 GAGGACGGAGGCGAAATCC 60.227 63.158 0.00 0.00 0.00 3.01
4056 4353 0.179056 GGCGAAATCCGAAGATCCCA 60.179 55.000 0.00 0.00 41.76 4.37
4077 4374 2.190578 GGGCGTTGAGATGGGAGG 59.809 66.667 0.00 0.00 0.00 4.30
4079 4376 2.367202 GGCGTTGAGATGGGAGGGA 61.367 63.158 0.00 0.00 0.00 4.20
4082 4379 1.416401 GCGTTGAGATGGGAGGGATTA 59.584 52.381 0.00 0.00 0.00 1.75
4083 4380 2.039084 GCGTTGAGATGGGAGGGATTAT 59.961 50.000 0.00 0.00 0.00 1.28
4088 4385 2.310052 GAGATGGGAGGGATTATTGGGG 59.690 54.545 0.00 0.00 0.00 4.96
4092 4389 0.178961 GGAGGGATTATTGGGGGTGC 60.179 60.000 0.00 0.00 0.00 5.01
4094 4391 0.557729 AGGGATTATTGGGGGTGCTG 59.442 55.000 0.00 0.00 0.00 4.41
4095 4392 1.115326 GGGATTATTGGGGGTGCTGC 61.115 60.000 0.00 0.00 0.00 5.25
4097 4394 0.106015 GATTATTGGGGGTGCTGCCT 60.106 55.000 0.00 0.00 37.43 4.75
4098 4395 1.144913 GATTATTGGGGGTGCTGCCTA 59.855 52.381 0.00 0.00 37.43 3.93
4100 4397 1.641552 TATTGGGGGTGCTGCCTACC 61.642 60.000 0.00 0.00 37.43 3.18
4119 4416 3.350612 GTGCGCCGCTAAACACCA 61.351 61.111 11.67 0.00 0.00 4.17
4121 4418 4.439472 GCGCCGCTAAACACCACG 62.439 66.667 0.00 0.00 0.00 4.94
4131 4428 2.351924 AAACACCACGTCCTGGCCAT 62.352 55.000 5.51 0.00 45.32 4.40
4154 4451 3.001514 TCCCTGCTGGATTGAGCC 58.998 61.111 11.88 0.00 38.61 4.70
4155 4452 2.123982 CCCTGCTGGATTGAGCCC 60.124 66.667 11.88 0.00 38.28 5.19
4156 4453 2.679092 CCTGCTGGATTGAGCCCA 59.321 61.111 2.92 0.00 38.28 5.36
4161 4458 2.877975 CTGGATTGAGCCCAGTTGG 58.122 57.895 0.00 0.00 44.66 3.77
4162 4459 0.329261 CTGGATTGAGCCCAGTTGGA 59.671 55.000 0.00 0.00 44.66 3.53
4163 4460 1.002069 TGGATTGAGCCCAGTTGGAT 58.998 50.000 0.00 0.00 37.39 3.41
4164 4461 1.358787 TGGATTGAGCCCAGTTGGATT 59.641 47.619 0.00 0.00 37.39 3.01
4165 4462 2.225343 TGGATTGAGCCCAGTTGGATTT 60.225 45.455 0.00 0.00 37.39 2.17
4166 4463 2.167075 GGATTGAGCCCAGTTGGATTTG 59.833 50.000 0.00 0.00 37.39 2.32
4167 4464 0.968405 TTGAGCCCAGTTGGATTTGC 59.032 50.000 0.00 0.00 37.39 3.68
4168 4465 0.112995 TGAGCCCAGTTGGATTTGCT 59.887 50.000 0.00 0.00 37.39 3.91
4169 4466 1.354031 TGAGCCCAGTTGGATTTGCTA 59.646 47.619 0.00 0.00 37.39 3.49
4170 4467 1.745653 GAGCCCAGTTGGATTTGCTAC 59.254 52.381 0.00 0.00 37.39 3.58
4171 4468 0.451783 GCCCAGTTGGATTTGCTACG 59.548 55.000 0.00 0.00 37.39 3.51
4172 4469 0.451783 CCCAGTTGGATTTGCTACGC 59.548 55.000 0.00 0.00 37.39 4.42
4173 4470 0.451783 CCAGTTGGATTTGCTACGCC 59.548 55.000 0.00 0.00 37.39 5.68
4174 4471 0.451783 CAGTTGGATTTGCTACGCCC 59.548 55.000 0.00 0.00 0.00 6.13
4175 4472 0.679960 AGTTGGATTTGCTACGCCCC 60.680 55.000 0.00 0.00 0.00 5.80
4176 4473 1.379309 TTGGATTTGCTACGCCCCC 60.379 57.895 0.00 0.00 0.00 5.40
4177 4474 2.143575 TTGGATTTGCTACGCCCCCA 62.144 55.000 0.00 0.00 0.00 4.96
4178 4475 1.823899 GGATTTGCTACGCCCCCAG 60.824 63.158 0.00 0.00 0.00 4.45
4179 4476 1.223487 GATTTGCTACGCCCCCAGA 59.777 57.895 0.00 0.00 0.00 3.86
4180 4477 0.179018 GATTTGCTACGCCCCCAGAT 60.179 55.000 0.00 0.00 0.00 2.90
4181 4478 0.258774 ATTTGCTACGCCCCCAGATT 59.741 50.000 0.00 0.00 0.00 2.40
4182 4479 0.393808 TTTGCTACGCCCCCAGATTC 60.394 55.000 0.00 0.00 0.00 2.52
4183 4480 2.111251 GCTACGCCCCCAGATTCC 59.889 66.667 0.00 0.00 0.00 3.01
4184 4481 2.829592 CTACGCCCCCAGATTCCC 59.170 66.667 0.00 0.00 0.00 3.97
4185 4482 2.770904 TACGCCCCCAGATTCCCC 60.771 66.667 0.00 0.00 0.00 4.81
4186 4483 3.644465 TACGCCCCCAGATTCCCCA 62.644 63.158 0.00 0.00 0.00 4.96
4187 4484 4.195334 CGCCCCCAGATTCCCCAG 62.195 72.222 0.00 0.00 0.00 4.45
4188 4485 3.023735 GCCCCCAGATTCCCCAGT 61.024 66.667 0.00 0.00 0.00 4.00
4189 4486 2.626467 GCCCCCAGATTCCCCAGTT 61.626 63.158 0.00 0.00 0.00 3.16
4190 4487 1.615262 CCCCCAGATTCCCCAGTTC 59.385 63.158 0.00 0.00 0.00 3.01
4191 4488 1.615262 CCCCAGATTCCCCAGTTCC 59.385 63.158 0.00 0.00 0.00 3.62
4192 4489 1.224592 CCCAGATTCCCCAGTTCCG 59.775 63.158 0.00 0.00 0.00 4.30
4193 4490 1.562672 CCCAGATTCCCCAGTTCCGT 61.563 60.000 0.00 0.00 0.00 4.69
4194 4491 0.392998 CCAGATTCCCCAGTTCCGTG 60.393 60.000 0.00 0.00 0.00 4.94
4195 4492 1.026718 CAGATTCCCCAGTTCCGTGC 61.027 60.000 0.00 0.00 0.00 5.34
4196 4493 2.046314 ATTCCCCAGTTCCGTGCG 60.046 61.111 0.00 0.00 0.00 5.34
4197 4494 3.622060 ATTCCCCAGTTCCGTGCGG 62.622 63.158 3.94 3.94 0.00 5.69
4199 4496 4.760047 CCCCAGTTCCGTGCGGAG 62.760 72.222 13.25 2.67 46.06 4.63
4200 4497 4.760047 CCCAGTTCCGTGCGGAGG 62.760 72.222 13.25 11.21 46.06 4.30
4201 4498 3.691342 CCAGTTCCGTGCGGAGGA 61.691 66.667 13.25 0.00 46.06 3.71
4202 4499 2.125912 CAGTTCCGTGCGGAGGAG 60.126 66.667 13.25 4.02 46.06 3.69
4203 4500 3.382832 AGTTCCGTGCGGAGGAGG 61.383 66.667 13.25 0.00 46.06 4.30
4204 4501 3.379445 GTTCCGTGCGGAGGAGGA 61.379 66.667 13.25 0.00 46.06 3.71
4205 4502 3.068691 TTCCGTGCGGAGGAGGAG 61.069 66.667 13.25 0.00 46.06 3.69
4206 4503 3.578968 TTCCGTGCGGAGGAGGAGA 62.579 63.158 13.25 0.00 46.06 3.71
4207 4504 2.835431 CCGTGCGGAGGAGGAGAT 60.835 66.667 4.35 0.00 35.20 2.75
4208 4505 2.415010 CGTGCGGAGGAGGAGATG 59.585 66.667 0.00 0.00 35.20 2.90
4209 4506 2.107953 GTGCGGAGGAGGAGATGC 59.892 66.667 0.00 0.00 0.00 3.91
4210 4507 2.042537 TGCGGAGGAGGAGATGCT 60.043 61.111 0.00 0.00 0.00 3.79
4211 4508 1.109920 GTGCGGAGGAGGAGATGCTA 61.110 60.000 0.00 0.00 0.00 3.49
4212 4509 0.397114 TGCGGAGGAGGAGATGCTAA 60.397 55.000 0.00 0.00 0.00 3.09
4213 4510 0.316841 GCGGAGGAGGAGATGCTAAG 59.683 60.000 0.00 0.00 0.00 2.18
4214 4511 1.988293 CGGAGGAGGAGATGCTAAGA 58.012 55.000 0.00 0.00 0.00 2.10
4215 4512 1.885887 CGGAGGAGGAGATGCTAAGAG 59.114 57.143 0.00 0.00 0.00 2.85
4216 4513 2.247358 GGAGGAGGAGATGCTAAGAGG 58.753 57.143 0.00 0.00 0.00 3.69
4217 4514 1.618343 GAGGAGGAGATGCTAAGAGGC 59.382 57.143 0.00 0.00 0.00 4.70
4218 4515 1.062581 AGGAGGAGATGCTAAGAGGCA 60.063 52.381 0.00 0.00 46.63 4.75
4219 4516 1.765314 GGAGGAGATGCTAAGAGGCAA 59.235 52.381 0.00 0.00 45.68 4.52
4220 4517 2.224257 GGAGGAGATGCTAAGAGGCAAG 60.224 54.545 0.00 0.00 45.68 4.01
4221 4518 2.433970 GAGGAGATGCTAAGAGGCAAGT 59.566 50.000 0.00 0.00 45.68 3.16
4222 4519 2.433970 AGGAGATGCTAAGAGGCAAGTC 59.566 50.000 0.00 0.00 45.68 3.01
4223 4520 2.433970 GGAGATGCTAAGAGGCAAGTCT 59.566 50.000 0.00 0.00 45.68 3.24
4224 4521 3.492482 GGAGATGCTAAGAGGCAAGTCTC 60.492 52.174 10.00 10.00 45.68 3.36
4225 4522 2.100584 AGATGCTAAGAGGCAAGTCTCG 59.899 50.000 0.00 0.00 45.68 4.04
4226 4523 0.108615 TGCTAAGAGGCAAGTCTCGC 60.109 55.000 0.00 0.00 39.43 5.03
4243 4540 4.160635 CCGGCGCCATTGTCGTTC 62.161 66.667 28.98 0.00 0.00 3.95
4244 4541 4.499023 CGGCGCCATTGTCGTTCG 62.499 66.667 28.98 3.82 0.00 3.95
4245 4542 4.160635 GGCGCCATTGTCGTTCGG 62.161 66.667 24.80 0.00 0.00 4.30
4246 4543 4.160635 GCGCCATTGTCGTTCGGG 62.161 66.667 0.00 0.00 0.00 5.14
4247 4544 2.740826 CGCCATTGTCGTTCGGGT 60.741 61.111 0.00 0.00 0.00 5.28
4248 4545 2.736682 CGCCATTGTCGTTCGGGTC 61.737 63.158 0.00 0.00 0.00 4.46
4249 4546 1.375523 GCCATTGTCGTTCGGGTCT 60.376 57.895 0.00 0.00 0.00 3.85
4250 4547 1.359459 GCCATTGTCGTTCGGGTCTC 61.359 60.000 0.00 0.00 0.00 3.36
4251 4548 0.739813 CCATTGTCGTTCGGGTCTCC 60.740 60.000 0.00 0.00 0.00 3.71
4252 4549 0.037697 CATTGTCGTTCGGGTCTCCA 60.038 55.000 0.00 0.00 0.00 3.86
4253 4550 0.246635 ATTGTCGTTCGGGTCTCCAG 59.753 55.000 0.00 0.00 0.00 3.86
4254 4551 1.111116 TTGTCGTTCGGGTCTCCAGT 61.111 55.000 0.00 0.00 0.00 4.00
4255 4552 1.080705 GTCGTTCGGGTCTCCAGTG 60.081 63.158 0.00 0.00 0.00 3.66
4256 4553 1.228337 TCGTTCGGGTCTCCAGTGA 60.228 57.895 0.00 0.00 0.00 3.41
4257 4554 1.213013 CGTTCGGGTCTCCAGTGAG 59.787 63.158 0.00 0.00 40.17 3.51
4258 4555 1.241990 CGTTCGGGTCTCCAGTGAGA 61.242 60.000 0.00 0.00 45.39 3.27
4266 4563 2.300956 TCTCCAGTGAGAAGAGCTGT 57.699 50.000 0.00 0.00 44.62 4.40
4267 4564 1.891811 TCTCCAGTGAGAAGAGCTGTG 59.108 52.381 0.00 0.00 44.62 3.66
4268 4565 0.972134 TCCAGTGAGAAGAGCTGTGG 59.028 55.000 0.00 0.00 0.00 4.17
4269 4566 0.036577 CCAGTGAGAAGAGCTGTGGG 60.037 60.000 0.00 0.00 0.00 4.61
4270 4567 0.036577 CAGTGAGAAGAGCTGTGGGG 60.037 60.000 0.00 0.00 0.00 4.96
4271 4568 1.376553 GTGAGAAGAGCTGTGGGGC 60.377 63.158 0.00 0.00 0.00 5.80
4272 4569 2.125350 GAGAAGAGCTGTGGGGCG 60.125 66.667 0.00 0.00 37.29 6.13
4273 4570 3.672295 GAGAAGAGCTGTGGGGCGG 62.672 68.421 0.00 0.00 37.29 6.13
4274 4571 3.706373 GAAGAGCTGTGGGGCGGA 61.706 66.667 0.00 0.00 37.29 5.54
4275 4572 3.249189 AAGAGCTGTGGGGCGGAA 61.249 61.111 0.00 0.00 37.29 4.30
4276 4573 3.553095 AAGAGCTGTGGGGCGGAAC 62.553 63.158 0.00 0.00 37.29 3.62
4277 4574 4.329545 GAGCTGTGGGGCGGAACA 62.330 66.667 0.00 0.00 37.29 3.18
4278 4575 4.335647 AGCTGTGGGGCGGAACAG 62.336 66.667 8.09 8.09 45.37 3.16
4279 4576 4.329545 GCTGTGGGGCGGAACAGA 62.330 66.667 14.65 0.00 45.43 3.41
4280 4577 2.046892 CTGTGGGGCGGAACAGAG 60.047 66.667 6.94 0.00 45.43 3.35
4281 4578 2.847234 TGTGGGGCGGAACAGAGT 60.847 61.111 0.00 0.00 0.00 3.24
4282 4579 2.047179 GTGGGGCGGAACAGAGTC 60.047 66.667 0.00 0.00 0.00 3.36
4283 4580 3.691342 TGGGGCGGAACAGAGTCG 61.691 66.667 0.00 0.00 0.00 4.18
4293 4590 2.183811 CAGAGTCGCTGCCAGGAG 59.816 66.667 0.00 0.00 37.90 3.69
4294 4591 3.073735 AGAGTCGCTGCCAGGAGG 61.074 66.667 0.00 0.00 38.23 4.30
4295 4592 4.154347 GAGTCGCTGCCAGGAGGG 62.154 72.222 0.00 0.00 40.85 4.30
4306 4603 2.369001 AGGAGGGCCCTACTGGTC 59.631 66.667 37.46 17.33 45.48 4.02
4307 4604 2.040606 GGAGGGCCCTACTGGTCA 59.959 66.667 28.63 0.00 42.20 4.02
4308 4605 2.066999 GGAGGGCCCTACTGGTCAG 61.067 68.421 28.63 0.00 42.20 3.51
4309 4606 2.689034 AGGGCCCTACTGGTCAGC 60.689 66.667 27.42 0.00 42.20 4.26
4310 4607 4.162690 GGGCCCTACTGGTCAGCG 62.163 72.222 17.04 0.00 42.20 5.18
4311 4608 3.075005 GGCCCTACTGGTCAGCGA 61.075 66.667 0.00 0.00 39.18 4.93
4312 4609 2.496817 GCCCTACTGGTCAGCGAG 59.503 66.667 0.00 0.00 36.04 5.03
4313 4610 2.496817 CCCTACTGGTCAGCGAGC 59.503 66.667 0.00 1.60 0.00 5.03
4314 4611 2.351244 CCCTACTGGTCAGCGAGCA 61.351 63.158 9.44 9.44 37.74 4.26
4319 4616 3.233980 TGGTCAGCGAGCAGTGGT 61.234 61.111 0.00 0.00 35.04 4.16
4320 4617 2.433318 GGTCAGCGAGCAGTGGTC 60.433 66.667 12.41 12.41 0.00 4.02
4321 4618 2.340078 GTCAGCGAGCAGTGGTCA 59.660 61.111 21.46 0.00 0.00 4.02
4322 4619 2.024319 GTCAGCGAGCAGTGGTCAC 61.024 63.158 21.46 12.46 0.00 3.67
4323 4620 2.740055 CAGCGAGCAGTGGTCACC 60.740 66.667 21.46 11.71 0.00 4.02
4324 4621 4.363990 AGCGAGCAGTGGTCACCG 62.364 66.667 21.46 10.03 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.455990 TCTTCTCATCATGCAGAGAGC 57.544 47.619 14.05 0.00 41.49 4.09
50 51 1.160329 CCGGAATGATTCTGCGGGAC 61.160 60.000 13.01 0.00 32.89 4.46
78 79 4.473520 CTGCGCCTCCACCGGAAT 62.474 66.667 9.46 0.00 0.00 3.01
82 83 2.892425 GATTCTGCGCCTCCACCG 60.892 66.667 4.18 0.00 0.00 4.94
143 144 7.167924 ACTAAGTAGCAGTAGAGGTAAAACC 57.832 40.000 0.00 0.00 38.99 3.27
173 174 1.317613 ATCAGCACCGAAGCAACAAA 58.682 45.000 2.02 0.00 36.85 2.83
202 203 5.992729 TGAAAAACTAAATCACACTACCGC 58.007 37.500 0.00 0.00 0.00 5.68
253 254 5.899547 TGAGTAAGGCAATTCTATGGAGAGA 59.100 40.000 0.00 0.00 31.77 3.10
289 290 9.529325 CGGAAATAGTAAATCTCTGAACACATA 57.471 33.333 0.00 0.00 0.00 2.29
290 291 8.258007 TCGGAAATAGTAAATCTCTGAACACAT 58.742 33.333 0.00 0.00 0.00 3.21
401 417 0.036010 CTCCGAGCAACCACTCCAAT 60.036 55.000 0.00 0.00 32.79 3.16
523 539 3.106407 GTCTGTGGACGCGTCAGC 61.106 66.667 37.26 28.19 40.74 4.26
534 550 1.275657 GGTGTCGCAAACGTCTGTG 59.724 57.895 0.00 0.00 41.18 3.66
535 551 2.235016 CGGTGTCGCAAACGTCTGT 61.235 57.895 0.00 0.00 41.18 3.41
537 553 0.248990 TTACGGTGTCGCAAACGTCT 60.249 50.000 3.46 0.00 40.38 4.18
538 554 0.785979 ATTACGGTGTCGCAAACGTC 59.214 50.000 3.46 0.00 40.38 4.34
552 568 9.677567 CCAAATATTCTTTTACCATCCATTACG 57.322 33.333 0.00 0.00 0.00 3.18
556 572 8.370182 GCATCCAAATATTCTTTTACCATCCAT 58.630 33.333 0.00 0.00 0.00 3.41
563 579 7.033185 ACCAACGCATCCAAATATTCTTTTAC 58.967 34.615 0.00 0.00 0.00 2.01
566 582 5.659440 ACCAACGCATCCAAATATTCTTT 57.341 34.783 0.00 0.00 0.00 2.52
569 585 4.035017 CGAACCAACGCATCCAAATATTC 58.965 43.478 0.00 0.00 0.00 1.75
572 588 1.740585 CCGAACCAACGCATCCAAATA 59.259 47.619 0.00 0.00 0.00 1.40
578 594 0.802494 AATGTCCGAACCAACGCATC 59.198 50.000 0.00 0.00 0.00 3.91
580 596 0.309302 CAAATGTCCGAACCAACGCA 59.691 50.000 0.00 0.00 0.00 5.24
591 607 7.472543 GTCCATTATAACACTCACAAATGTCC 58.527 38.462 0.00 0.00 0.00 4.02
592 608 7.180079 CGTCCATTATAACACTCACAAATGTC 58.820 38.462 0.00 0.00 0.00 3.06
595 611 6.093495 CACCGTCCATTATAACACTCACAAAT 59.907 38.462 0.00 0.00 0.00 2.32
602 618 6.379133 TCTCTAACACCGTCCATTATAACACT 59.621 38.462 0.00 0.00 0.00 3.55
610 626 2.420129 GGCATCTCTAACACCGTCCATT 60.420 50.000 0.00 0.00 0.00 3.16
611 627 1.139058 GGCATCTCTAACACCGTCCAT 59.861 52.381 0.00 0.00 0.00 3.41
618 634 5.652452 ACCAATTTAAGGGCATCTCTAACAC 59.348 40.000 0.00 0.00 0.00 3.32
623 639 3.628257 CCCACCAATTTAAGGGCATCTCT 60.628 47.826 0.00 0.00 33.91 3.10
625 641 2.750814 CCCACCAATTTAAGGGCATCT 58.249 47.619 0.00 0.00 33.91 2.90
660 676 2.525629 TGGGTCAGACTTGCGGGA 60.526 61.111 0.00 0.00 0.00 5.14
663 679 0.588252 CAAAGTGGGTCAGACTTGCG 59.412 55.000 0.00 0.00 33.85 4.85
664 680 0.954452 CCAAAGTGGGTCAGACTTGC 59.046 55.000 0.00 0.00 33.85 4.01
666 682 0.535102 CGCCAAAGTGGGTCAGACTT 60.535 55.000 0.00 0.00 38.19 3.01
670 689 2.281761 AGCGCCAAAGTGGGTCAG 60.282 61.111 2.29 0.00 38.19 3.51
686 705 0.247460 TCCAATCACGAGTGCCTGAG 59.753 55.000 0.00 0.00 0.00 3.35
690 709 2.380084 TTACTCCAATCACGAGTGCC 57.620 50.000 0.00 0.00 40.75 5.01
697 716 9.833182 GAAGAAGAAGAAAATTACTCCAATCAC 57.167 33.333 0.00 0.00 0.00 3.06
698 717 9.799106 AGAAGAAGAAGAAAATTACTCCAATCA 57.201 29.630 0.00 0.00 0.00 2.57
701 720 9.853177 AGAAGAAGAAGAAGAAAATTACTCCAA 57.147 29.630 0.00 0.00 0.00 3.53
702 721 9.853177 AAGAAGAAGAAGAAGAAAATTACTCCA 57.147 29.630 0.00 0.00 0.00 3.86
710 729 9.898152 AGAAGAAGAAGAAGAAGAAGAAGAAAA 57.102 29.630 0.00 0.00 0.00 2.29
711 730 9.898152 AAGAAGAAGAAGAAGAAGAAGAAGAAA 57.102 29.630 0.00 0.00 0.00 2.52
712 731 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
713 732 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
714 733 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
715 734 9.323985 CAAGAAGAAGAAGAAGAAGAAGAAGAA 57.676 33.333 0.00 0.00 0.00 2.52
716 735 8.482128 ACAAGAAGAAGAAGAAGAAGAAGAAGA 58.518 33.333 0.00 0.00 0.00 2.87
717 736 8.661352 ACAAGAAGAAGAAGAAGAAGAAGAAG 57.339 34.615 0.00 0.00 0.00 2.85
718 737 9.454859 AAACAAGAAGAAGAAGAAGAAGAAGAA 57.545 29.630 0.00 0.00 0.00 2.52
719 738 9.454859 AAAACAAGAAGAAGAAGAAGAAGAAGA 57.545 29.630 0.00 0.00 0.00 2.87
723 742 9.444534 GCTAAAAACAAGAAGAAGAAGAAGAAG 57.555 33.333 0.00 0.00 0.00 2.85
757 777 7.197017 ACAAATTCCGCGCATGTATTTATTAA 58.803 30.769 8.75 0.00 0.00 1.40
771 791 9.710979 TTTCTTAAATCTATAACAAATTCCGCG 57.289 29.630 0.00 0.00 0.00 6.46
842 1103 9.260002 CATATATATGTGTGTGTGTGTGTGTAT 57.740 33.333 13.69 0.00 0.00 2.29
843 1104 8.470805 TCATATATATGTGTGTGTGTGTGTGTA 58.529 33.333 19.78 0.00 35.26 2.90
844 1105 7.277760 GTCATATATATGTGTGTGTGTGTGTGT 59.722 37.037 19.78 0.00 35.26 3.72
845 1106 7.515059 CGTCATATATATGTGTGTGTGTGTGTG 60.515 40.741 19.78 0.00 35.26 3.82
846 1107 6.475402 CGTCATATATATGTGTGTGTGTGTGT 59.525 38.462 19.78 0.00 35.26 3.72
847 1108 6.475402 ACGTCATATATATGTGTGTGTGTGTG 59.525 38.462 19.78 0.00 35.26 3.82
848 1109 6.475402 CACGTCATATATATGTGTGTGTGTGT 59.525 38.462 25.88 12.12 36.90 3.72
849 1110 6.475402 ACACGTCATATATATGTGTGTGTGTG 59.525 38.462 32.05 24.39 43.62 3.82
850 1111 6.569780 ACACGTCATATATATGTGTGTGTGT 58.430 36.000 32.05 26.66 43.62 3.72
851 1112 7.463469 AACACGTCATATATATGTGTGTGTG 57.537 36.000 32.61 26.58 44.30 3.82
852 1113 8.487313 AAAACACGTCATATATATGTGTGTGT 57.513 30.769 32.61 29.51 44.30 3.72
953 1214 9.007901 AGACCTCTTTTAGATTCAACATTTCTG 57.992 33.333 0.00 0.00 0.00 3.02
1024 1286 7.708322 TGGACATTTTCGAAATTCATGAACAAA 59.292 29.630 21.88 4.11 0.00 2.83
1031 1293 5.621197 TCGTGGACATTTTCGAAATTCAT 57.379 34.783 12.12 0.00 0.00 2.57
1128 1397 9.893305 CACTTTCACGGTTTTCTAATCTATTTT 57.107 29.630 0.00 0.00 0.00 1.82
1152 1421 3.362706 TCTATGGACTAGTGTGACCCAC 58.637 50.000 0.00 0.00 44.89 4.61
1153 1422 3.750501 TCTATGGACTAGTGTGACCCA 57.249 47.619 0.00 0.49 0.00 4.51
1154 1423 5.176592 GTTTTCTATGGACTAGTGTGACCC 58.823 45.833 0.00 0.00 0.00 4.46
1155 1424 5.176592 GGTTTTCTATGGACTAGTGTGACC 58.823 45.833 0.00 0.00 0.00 4.02
1156 1425 4.863131 CGGTTTTCTATGGACTAGTGTGAC 59.137 45.833 0.00 0.00 0.00 3.67
1157 1426 4.619863 GCGGTTTTCTATGGACTAGTGTGA 60.620 45.833 0.00 0.00 0.00 3.58
1158 1427 3.617263 GCGGTTTTCTATGGACTAGTGTG 59.383 47.826 0.00 0.00 0.00 3.82
1159 1428 3.514309 AGCGGTTTTCTATGGACTAGTGT 59.486 43.478 0.00 0.00 0.00 3.55
1160 1429 4.124851 AGCGGTTTTCTATGGACTAGTG 57.875 45.455 0.00 0.00 0.00 2.74
1161 1430 5.927281 TTAGCGGTTTTCTATGGACTAGT 57.073 39.130 0.00 0.00 0.00 2.57
1162 1431 6.592607 TGTTTTAGCGGTTTTCTATGGACTAG 59.407 38.462 0.00 0.00 0.00 2.57
1163 1432 6.465948 TGTTTTAGCGGTTTTCTATGGACTA 58.534 36.000 0.00 0.00 0.00 2.59
1164 1433 5.310451 TGTTTTAGCGGTTTTCTATGGACT 58.690 37.500 0.00 0.00 0.00 3.85
1165 1434 5.616488 TGTTTTAGCGGTTTTCTATGGAC 57.384 39.130 0.00 0.00 0.00 4.02
1166 1435 6.487331 TCTTTGTTTTAGCGGTTTTCTATGGA 59.513 34.615 0.00 0.00 0.00 3.41
1167 1436 6.674066 TCTTTGTTTTAGCGGTTTTCTATGG 58.326 36.000 0.00 0.00 0.00 2.74
1168 1437 7.581476 TCTCTTTGTTTTAGCGGTTTTCTATG 58.419 34.615 0.00 0.00 0.00 2.23
1169 1438 7.739498 TCTCTTTGTTTTAGCGGTTTTCTAT 57.261 32.000 0.00 0.00 0.00 1.98
1170 1439 7.556733 TTCTCTTTGTTTTAGCGGTTTTCTA 57.443 32.000 0.00 0.00 0.00 2.10
1171 1440 6.445357 TTCTCTTTGTTTTAGCGGTTTTCT 57.555 33.333 0.00 0.00 0.00 2.52
1172 1441 7.514573 TTTTCTCTTTGTTTTAGCGGTTTTC 57.485 32.000 0.00 0.00 0.00 2.29
1173 1442 7.148540 GGTTTTTCTCTTTGTTTTAGCGGTTTT 60.149 33.333 0.00 0.00 0.00 2.43
1215 1484 6.698766 GTGAGCAATTTTGTTCTCTTTCATGT 59.301 34.615 8.33 0.00 38.92 3.21
1246 1515 1.301401 CCAACTGGAACGAGCGGAA 60.301 57.895 0.00 0.00 37.39 4.30
1287 1556 4.406069 CAAGTTGACGGTCAATTGCATAG 58.594 43.478 24.81 8.83 38.79 2.23
1315 1584 6.985188 AAATGTTCTATACACGTTGCTCAT 57.015 33.333 0.00 0.00 40.19 2.90
1327 1596 4.519213 CACCCACGGGAAAATGTTCTATA 58.481 43.478 9.72 0.00 38.96 1.31
1334 1603 2.566010 CGCACCCACGGGAAAATG 59.434 61.111 9.72 0.00 38.96 2.32
1466 1736 8.233868 TGAACGAAATTTCACATACCTGTAATG 58.766 33.333 17.99 0.00 33.14 1.90
1783 2061 3.266240 GACTTAACCAGGCCCCAAG 57.734 57.895 0.00 0.00 0.00 3.61
1827 2105 3.439129 GTGACAACTGGTTTACTATGGGC 59.561 47.826 0.00 0.00 0.00 5.36
1830 2108 4.647611 TGGGTGACAACTGGTTTACTATG 58.352 43.478 0.00 0.00 0.00 2.23
1833 2111 3.497942 GGATGGGTGACAACTGGTTTACT 60.498 47.826 0.00 0.00 0.00 2.24
1834 2112 2.817844 GGATGGGTGACAACTGGTTTAC 59.182 50.000 0.00 0.00 0.00 2.01
1835 2113 2.714250 AGGATGGGTGACAACTGGTTTA 59.286 45.455 0.00 0.00 0.00 2.01
1836 2114 1.499007 AGGATGGGTGACAACTGGTTT 59.501 47.619 0.00 0.00 0.00 3.27
1837 2115 1.073923 GAGGATGGGTGACAACTGGTT 59.926 52.381 0.00 0.00 0.00 3.67
1872 2150 0.885196 GCTGTTTTGGGTAATGGCGA 59.115 50.000 0.00 0.00 0.00 5.54
1982 2266 2.995450 CTTCGCGGTGGTTTCGTCG 61.995 63.158 6.13 0.00 0.00 5.12
1997 2281 0.880278 TGGTCTTCGTGCTGCACTTC 60.880 55.000 28.04 13.95 31.34 3.01
2009 2293 3.878160 AAGATCTCCTCGTTGGTCTTC 57.122 47.619 0.00 0.00 37.07 2.87
2014 2298 2.393271 AGCAAAGATCTCCTCGTTGG 57.607 50.000 0.00 0.00 41.82 3.77
2033 2317 4.272511 TGGCGGCGGGAAAAGGAA 62.273 61.111 9.78 0.00 0.00 3.36
2111 2395 4.899239 GCCATGGAGAGGACGCCG 62.899 72.222 18.40 0.00 38.83 6.46
2155 2439 3.195698 GGCGATCAGACCCAACGC 61.196 66.667 0.00 0.00 46.79 4.84
2224 2511 1.933247 CATCTTGAGAGAAGGCGGTC 58.067 55.000 0.00 0.00 35.07 4.79
2310 2597 2.585247 GGCGATGGCGTAGTGGTC 60.585 66.667 0.00 0.00 41.24 4.02
2333 2620 0.822944 TCTCGTGTACGTGGGGAACA 60.823 55.000 0.00 0.00 40.80 3.18
2342 2629 1.767289 AACTGCTGTTCTCGTGTACG 58.233 50.000 2.72 0.00 41.45 3.67
2345 2632 2.351726 GACAAAACTGCTGTTCTCGTGT 59.648 45.455 9.60 11.04 34.96 4.49
2349 2636 2.550180 GGAGGACAAAACTGCTGTTCTC 59.450 50.000 9.60 10.69 45.30 2.87
2453 2742 3.016971 TGGCTGAGGTCCATGGGG 61.017 66.667 13.02 0.00 0.00 4.96
2474 2763 4.732355 GCACAGTTTGTCGTGTGGTAAAAT 60.732 41.667 4.75 0.00 43.62 1.82
2497 2786 2.949678 CGCTTCCGACCGTGATCG 60.950 66.667 0.00 0.00 41.89 3.69
2540 2829 0.621280 TGTCCCAGAGGATGATGCCA 60.621 55.000 0.00 0.00 46.41 4.92
2575 2864 1.361668 CGGCATGCCAGTGAGTGTAC 61.362 60.000 34.93 4.81 35.37 2.90
2576 2865 1.079197 CGGCATGCCAGTGAGTGTA 60.079 57.895 34.93 0.00 35.37 2.90
2579 2868 3.196207 AACCGGCATGCCAGTGAGT 62.196 57.895 34.93 20.22 35.37 3.41
2638 2927 1.451936 GCATGGCCTAATCTCCGGT 59.548 57.895 3.32 0.00 0.00 5.28
2642 2931 0.394565 ACCTCGCATGGCCTAATCTC 59.605 55.000 3.32 0.00 0.00 2.75
2672 2961 3.638160 GGCTGCCATTGATGAAGGAAATA 59.362 43.478 15.17 0.00 0.00 1.40
2673 2962 2.433239 GGCTGCCATTGATGAAGGAAAT 59.567 45.455 15.17 0.00 0.00 2.17
2678 2967 1.676529 CTGAGGCTGCCATTGATGAAG 59.323 52.381 22.65 2.30 0.00 3.02
2680 2969 0.106868 CCTGAGGCTGCCATTGATGA 60.107 55.000 22.65 0.00 0.00 2.92
2691 2980 1.004440 GCTCGACAAACCTGAGGCT 60.004 57.895 0.00 0.00 0.00 4.58
2705 2994 1.808945 AGGACTTCAAATTGCAGCTCG 59.191 47.619 0.00 0.00 0.00 5.03
2771 3060 0.856641 TCGTCCAGCTTTTCGTTTCG 59.143 50.000 0.00 0.00 0.00 3.46
2776 3065 0.721718 GGTGATCGTCCAGCTTTTCG 59.278 55.000 2.43 0.00 0.00 3.46
2803 3092 2.770802 AGCTCACTCATGCCTCTATTGT 59.229 45.455 0.00 0.00 0.00 2.71
2808 3097 1.273759 TGAAGCTCACTCATGCCTCT 58.726 50.000 0.00 0.00 0.00 3.69
2813 3102 5.236695 CCAATCACTATGAAGCTCACTCATG 59.763 44.000 9.24 3.24 0.00 3.07
2822 3111 3.126831 CTCGTCCCAATCACTATGAAGC 58.873 50.000 0.00 0.00 0.00 3.86
2826 3115 2.695666 AGTCCTCGTCCCAATCACTATG 59.304 50.000 0.00 0.00 0.00 2.23
2876 3165 1.736645 AGATTTGGTGTCGTCGCCG 60.737 57.895 7.73 0.00 46.30 6.46
2912 3201 4.854784 TCATCGCAGCCGTCTCGC 62.855 66.667 0.00 0.00 35.54 5.03
2914 3203 0.319383 ATGATCATCGCAGCCGTCTC 60.319 55.000 1.18 0.00 35.54 3.36
3043 3332 2.270352 TGACTTCGGGTGCAAGAATT 57.730 45.000 0.00 0.00 0.00 2.17
3083 3372 1.338020 CTTTGCACCCTGTGGTTCTTC 59.662 52.381 0.00 0.00 44.75 2.87
3096 3385 2.095567 CAGACATAGCCACACTTTGCAC 60.096 50.000 0.00 0.00 31.06 4.57
3140 3429 5.082059 GTGCAATAGTTTGAATCGACACAG 58.918 41.667 0.00 0.00 34.60 3.66
3185 3474 8.823220 ATAATTACCTGCTGGAGTGTTAATTT 57.177 30.769 17.64 4.72 37.04 1.82
3207 3496 7.390996 GTGCTGGTATAGAGTAGAGCAGTATAA 59.609 40.741 8.95 0.00 44.71 0.98
3209 3498 5.708230 GTGCTGGTATAGAGTAGAGCAGTAT 59.292 44.000 8.95 0.00 44.71 2.12
3214 3503 3.632604 TGTGTGCTGGTATAGAGTAGAGC 59.367 47.826 0.00 0.00 0.00 4.09
3217 3506 5.767269 CAGATGTGTGCTGGTATAGAGTAG 58.233 45.833 0.00 0.00 0.00 2.57
3246 3535 4.641989 ACCCTTAAGCAATGTAAGCATCAG 59.358 41.667 0.00 0.00 33.50 2.90
3272 3561 5.851177 CACACAAAACTAAGTGCCTTAATCG 59.149 40.000 0.00 0.00 39.30 3.34
3293 3583 4.006780 TCTTAGCACAGATTGAAGCACA 57.993 40.909 0.00 0.00 0.00 4.57
3302 3592 9.948964 TTATTATGCATGTATCTTAGCACAGAT 57.051 29.630 10.16 3.39 40.14 2.90
3330 3623 9.371136 GATTGAAAGTAGTACATCTGTGATCAA 57.629 33.333 0.00 0.00 0.00 2.57
3416 3713 9.122779 GCTCGGTAGGAGATAATAAGTATATGT 57.877 37.037 0.00 0.00 46.23 2.29
3427 3724 8.740906 CATAAATCTAAGCTCGGTAGGAGATAA 58.259 37.037 0.00 0.00 46.23 1.75
3429 3726 6.948886 TCATAAATCTAAGCTCGGTAGGAGAT 59.051 38.462 0.00 0.00 46.23 2.75
3436 3733 9.046296 CAAGTAATTCATAAATCTAAGCTCGGT 57.954 33.333 0.00 0.00 0.00 4.69
3437 3734 9.261180 TCAAGTAATTCATAAATCTAAGCTCGG 57.739 33.333 0.00 0.00 0.00 4.63
3485 3782 5.532779 GCAATTGTCCCCATGGTTTTAAAAA 59.467 36.000 11.73 0.00 0.00 1.94
3486 3783 5.066593 GCAATTGTCCCCATGGTTTTAAAA 58.933 37.500 11.73 0.00 0.00 1.52
3487 3784 4.505742 GGCAATTGTCCCCATGGTTTTAAA 60.506 41.667 11.73 0.00 0.00 1.52
3488 3785 3.008485 GGCAATTGTCCCCATGGTTTTAA 59.992 43.478 11.73 1.06 0.00 1.52
3489 3786 2.569404 GGCAATTGTCCCCATGGTTTTA 59.431 45.455 11.73 0.00 0.00 1.52
3490 3787 1.350684 GGCAATTGTCCCCATGGTTTT 59.649 47.619 11.73 0.00 0.00 2.43
3491 3788 0.983467 GGCAATTGTCCCCATGGTTT 59.017 50.000 11.73 0.00 0.00 3.27
3492 3789 0.909133 GGGCAATTGTCCCCATGGTT 60.909 55.000 18.83 0.00 41.13 3.67
3493 3790 1.306056 GGGCAATTGTCCCCATGGT 60.306 57.895 18.83 0.00 41.13 3.55
3494 3791 3.632896 GGGCAATTGTCCCCATGG 58.367 61.111 18.83 4.14 41.13 3.66
3500 3797 3.140814 GGAGCGGGGCAATTGTCC 61.141 66.667 21.32 21.32 39.63 4.02
3501 3798 3.140814 GGGAGCGGGGCAATTGTC 61.141 66.667 7.40 3.95 0.00 3.18
3502 3799 4.759205 GGGGAGCGGGGCAATTGT 62.759 66.667 7.40 0.00 0.00 2.71
3522 3819 3.103911 GTTGTGGAGTCGCCGTCG 61.104 66.667 0.00 0.00 40.66 5.12
3523 3820 2.737376 GGTTGTGGAGTCGCCGTC 60.737 66.667 0.00 0.00 40.66 4.79
3537 3834 3.669344 CAATGGCGTGCGGTGGTT 61.669 61.111 0.00 0.00 0.00 3.67
3560 3857 2.126812 CGCGGCTAGATCTACGGC 60.127 66.667 12.95 15.38 0.00 5.68
3564 3861 4.385093 CGCGCGCGGCTAGATCTA 62.385 66.667 43.28 1.69 40.44 1.98
3633 3930 4.040198 GGAAGGGGGAGGGGGAGT 62.040 72.222 0.00 0.00 0.00 3.85
3648 3945 2.241281 TATCGAGTGGGTGAAAGGGA 57.759 50.000 0.00 0.00 0.00 4.20
3652 3949 1.766496 GGGGATATCGAGTGGGTGAAA 59.234 52.381 0.00 0.00 0.00 2.69
3656 3953 1.533273 CGGGGGATATCGAGTGGGT 60.533 63.158 0.00 0.00 0.00 4.51
3660 3957 0.404812 ACTAGCGGGGGATATCGAGT 59.595 55.000 0.00 0.00 0.00 4.18
3667 3964 2.838225 CGTGGACTAGCGGGGGAT 60.838 66.667 0.00 0.00 0.00 3.85
3668 3965 4.051167 TCGTGGACTAGCGGGGGA 62.051 66.667 0.00 0.00 0.00 4.81
3671 3968 3.449227 TGCTCGTGGACTAGCGGG 61.449 66.667 0.00 0.00 41.77 6.13
3674 3971 0.528470 AGAAGTGCTCGTGGACTAGC 59.472 55.000 12.13 7.76 44.18 3.42
3686 3983 0.532573 TCACCATCTCCGAGAAGTGC 59.467 55.000 19.91 0.00 34.46 4.40
3687 3984 2.095461 TCTCACCATCTCCGAGAAGTG 58.905 52.381 19.13 19.13 35.26 3.16
3688 3985 2.516227 TCTCACCATCTCCGAGAAGT 57.484 50.000 1.27 0.39 32.96 3.01
3693 3990 4.162131 TGAAATCAATCTCACCATCTCCGA 59.838 41.667 0.00 0.00 0.00 4.55
3707 4004 0.808755 GCGGAACCGGTGAAATCAAT 59.191 50.000 8.52 0.00 40.19 2.57
3734 4031 3.157217 ATCTCCGACCGCCATGAGC 62.157 63.158 0.00 0.00 38.52 4.26
3744 4041 2.491022 CCCACCTCCGATCTCCGAC 61.491 68.421 0.00 0.00 41.76 4.79
3745 4042 2.123854 CCCACCTCCGATCTCCGA 60.124 66.667 0.00 0.00 41.76 4.55
3746 4043 2.442272 ACCCACCTCCGATCTCCG 60.442 66.667 0.00 0.00 38.18 4.63
3749 4046 0.546747 TTTCCACCCACCTCCGATCT 60.547 55.000 0.00 0.00 0.00 2.75
3751 4048 1.562672 CCTTTCCACCCACCTCCGAT 61.563 60.000 0.00 0.00 0.00 4.18
3754 4051 2.763902 CCCTTTCCACCCACCTCC 59.236 66.667 0.00 0.00 0.00 4.30
3756 4053 3.966543 CGCCCTTTCCACCCACCT 61.967 66.667 0.00 0.00 0.00 4.00
3767 4064 3.470888 CGGATCCTGGTCGCCCTT 61.471 66.667 10.75 0.00 0.00 3.95
3782 4079 1.214589 CACGAAGGTAGTGTCCCGG 59.785 63.158 0.00 0.00 35.08 5.73
3789 4086 1.825474 CTGGATCCACACGAAGGTAGT 59.175 52.381 11.44 0.00 0.00 2.73
3791 4088 0.535335 GCTGGATCCACACGAAGGTA 59.465 55.000 11.44 0.00 0.00 3.08
3792 4089 1.296715 GCTGGATCCACACGAAGGT 59.703 57.895 11.44 0.00 0.00 3.50
3794 4091 1.811266 CCGCTGGATCCACACGAAG 60.811 63.158 26.54 12.03 0.00 3.79
3795 4092 2.264480 CCGCTGGATCCACACGAA 59.736 61.111 26.54 0.81 0.00 3.85
3796 4093 3.770040 CCCGCTGGATCCACACGA 61.770 66.667 26.54 1.52 0.00 4.35
3797 4094 3.605749 AACCCGCTGGATCCACACG 62.606 63.158 20.65 20.65 34.81 4.49
3799 4096 1.773856 TTGAACCCGCTGGATCCACA 61.774 55.000 11.44 2.14 32.60 4.17
3806 4103 1.672356 CCACTCTTGAACCCGCTGG 60.672 63.158 0.00 0.00 37.80 4.85
3808 4105 0.035458 CTTCCACTCTTGAACCCGCT 59.965 55.000 0.00 0.00 0.00 5.52
3811 4108 1.545651 CCACCTTCCACTCTTGAACCC 60.546 57.143 0.00 0.00 0.00 4.11
3812 4109 1.897560 CCACCTTCCACTCTTGAACC 58.102 55.000 0.00 0.00 0.00 3.62
3818 4115 0.908198 GATCTGCCACCTTCCACTCT 59.092 55.000 0.00 0.00 0.00 3.24
3847 4144 1.964608 CTCTGGATCTCTTGCCGCCA 61.965 60.000 0.00 0.00 0.00 5.69
3854 4151 1.021202 CTCGCGTCTCTGGATCTCTT 58.979 55.000 5.77 0.00 0.00 2.85
3857 4154 1.453015 AGCTCGCGTCTCTGGATCT 60.453 57.895 5.77 0.00 0.00 2.75
3875 4172 4.830765 GCATACCTGACCGCCGCA 62.831 66.667 0.00 0.00 0.00 5.69
3883 4180 2.353704 CGACAAACCTCTGCATACCTGA 60.354 50.000 0.00 0.00 0.00 3.86
3902 4199 0.895530 CTACCTCTGCCCTCAAACGA 59.104 55.000 0.00 0.00 0.00 3.85
3904 4201 1.406205 GCTCTACCTCTGCCCTCAAAC 60.406 57.143 0.00 0.00 0.00 2.93
3905 4202 0.905357 GCTCTACCTCTGCCCTCAAA 59.095 55.000 0.00 0.00 0.00 2.69
3906 4203 0.252239 TGCTCTACCTCTGCCCTCAA 60.252 55.000 0.00 0.00 0.00 3.02
3907 4204 0.685785 CTGCTCTACCTCTGCCCTCA 60.686 60.000 0.00 0.00 0.00 3.86
3911 4208 0.396417 TCCTCTGCTCTACCTCTGCC 60.396 60.000 0.00 0.00 0.00 4.85
3919 4216 1.831106 TCGCCAAAATCCTCTGCTCTA 59.169 47.619 0.00 0.00 0.00 2.43
3932 4229 2.097036 TCGTAGATCCTCTTCGCCAAA 58.903 47.619 0.00 0.00 37.23 3.28
3933 4230 1.404391 GTCGTAGATCCTCTTCGCCAA 59.596 52.381 0.00 0.00 40.67 4.52
3942 4239 1.134037 AGAGGCTTCGTCGTAGATCCT 60.134 52.381 2.72 0.62 40.67 3.24
3943 4240 1.002251 CAGAGGCTTCGTCGTAGATCC 60.002 57.143 2.72 0.00 40.67 3.36
3960 4257 1.587043 CTTCGTCTCTCCGCCACAGA 61.587 60.000 0.00 0.00 0.00 3.41
3962 4259 2.636412 CCTTCGTCTCTCCGCCACA 61.636 63.158 0.00 0.00 0.00 4.17
3964 4261 1.379977 ATCCTTCGTCTCTCCGCCA 60.380 57.895 0.00 0.00 0.00 5.69
3967 4264 1.066587 GGCATCCTTCGTCTCTCCG 59.933 63.158 0.00 0.00 0.00 4.63
3985 4282 1.273552 ACTGGGAGAGAGGGAAGGAAG 60.274 57.143 0.00 0.00 0.00 3.46
3987 4284 0.336737 GACTGGGAGAGAGGGAAGGA 59.663 60.000 0.00 0.00 0.00 3.36
3992 4289 2.063378 GGCTGACTGGGAGAGAGGG 61.063 68.421 0.00 0.00 0.00 4.30
3997 4294 0.537188 GAAATCGGCTGACTGGGAGA 59.463 55.000 0.00 0.00 0.00 3.71
4002 4299 1.938577 CTGGATGAAATCGGCTGACTG 59.061 52.381 0.00 0.00 46.86 3.51
4003 4300 1.556911 ACTGGATGAAATCGGCTGACT 59.443 47.619 0.00 0.00 46.86 3.41
4007 4304 0.107017 CCCACTGGATGAAATCGGCT 60.107 55.000 0.00 0.00 46.86 5.52
4012 4309 0.107017 CCTCGCCCACTGGATGAAAT 60.107 55.000 0.00 0.00 0.00 2.17
4013 4310 1.198094 TCCTCGCCCACTGGATGAAA 61.198 55.000 0.00 0.00 0.00 2.69
4017 4314 3.461773 CGTCCTCGCCCACTGGAT 61.462 66.667 0.00 0.00 32.03 3.41
4020 4317 4.135153 CTCCGTCCTCGCCCACTG 62.135 72.222 0.00 0.00 35.54 3.66
4040 4337 2.224402 CCTCCTGGGATCTTCGGATTTC 60.224 54.545 0.00 0.00 37.23 2.17
4043 4340 3.155897 CCTCCTGGGATCTTCGGAT 57.844 57.895 0.00 0.00 37.23 4.18
4056 4353 2.370445 CCCATCTCAACGCCCTCCT 61.370 63.158 0.00 0.00 0.00 3.69
4065 4362 3.398967 CCCAATAATCCCTCCCATCTCAA 59.601 47.826 0.00 0.00 0.00 3.02
4068 4365 2.362208 CCCCAATAATCCCTCCCATCT 58.638 52.381 0.00 0.00 0.00 2.90
4077 4374 1.115326 GGCAGCACCCCCAATAATCC 61.115 60.000 0.00 0.00 0.00 3.01
4079 4376 1.133482 GTAGGCAGCACCCCCAATAAT 60.133 52.381 0.00 0.00 40.58 1.28
4082 4379 2.683475 GTAGGCAGCACCCCCAAT 59.317 61.111 0.00 0.00 40.58 3.16
4083 4380 3.657350 GGTAGGCAGCACCCCCAA 61.657 66.667 0.00 0.00 40.58 4.12
4140 4437 4.237445 CTGGGCTCAATCCAGCAG 57.763 61.111 0.00 0.00 44.29 4.24
4144 4441 1.002069 ATCCAACTGGGCTCAATCCA 58.998 50.000 0.00 0.00 36.21 3.41
4167 4464 2.819284 GGGGAATCTGGGGGCGTAG 61.819 68.421 0.00 0.00 0.00 3.51
4168 4465 2.770904 GGGGAATCTGGGGGCGTA 60.771 66.667 0.00 0.00 0.00 4.42
4170 4467 4.195334 CTGGGGAATCTGGGGGCG 62.195 72.222 0.00 0.00 0.00 6.13
4171 4468 2.573893 GAACTGGGGAATCTGGGGGC 62.574 65.000 0.00 0.00 0.00 5.80
4172 4469 1.615262 GAACTGGGGAATCTGGGGG 59.385 63.158 0.00 0.00 0.00 5.40
4173 4470 1.615262 GGAACTGGGGAATCTGGGG 59.385 63.158 0.00 0.00 0.00 4.96
4174 4471 1.224592 CGGAACTGGGGAATCTGGG 59.775 63.158 0.00 0.00 0.00 4.45
4175 4472 0.392998 CACGGAACTGGGGAATCTGG 60.393 60.000 0.00 0.00 0.00 3.86
4176 4473 1.026718 GCACGGAACTGGGGAATCTG 61.027 60.000 0.00 0.00 0.00 2.90
4177 4474 1.299976 GCACGGAACTGGGGAATCT 59.700 57.895 0.00 0.00 0.00 2.40
4178 4475 2.106683 CGCACGGAACTGGGGAATC 61.107 63.158 0.00 0.00 0.00 2.52
4179 4476 2.046314 CGCACGGAACTGGGGAAT 60.046 61.111 0.00 0.00 0.00 3.01
4180 4477 4.323477 CCGCACGGAACTGGGGAA 62.323 66.667 2.01 0.00 45.17 3.97
4182 4479 4.760047 CTCCGCACGGAACTGGGG 62.760 72.222 13.55 0.00 44.66 4.96
4183 4480 4.760047 CCTCCGCACGGAACTGGG 62.760 72.222 13.55 6.96 44.66 4.45
4184 4481 3.649277 CTCCTCCGCACGGAACTGG 62.649 68.421 13.55 11.05 44.66 4.00
4185 4482 2.125912 CTCCTCCGCACGGAACTG 60.126 66.667 13.55 5.04 44.66 3.16
4186 4483 3.382832 CCTCCTCCGCACGGAACT 61.383 66.667 13.55 0.00 44.66 3.01
4187 4484 3.358076 CTCCTCCTCCGCACGGAAC 62.358 68.421 13.55 0.00 44.66 3.62
4188 4485 2.856039 ATCTCCTCCTCCGCACGGAA 62.856 60.000 13.55 0.00 44.66 4.30
4189 4486 3.360423 ATCTCCTCCTCCGCACGGA 62.360 63.158 11.90 11.90 42.90 4.69
4190 4487 2.835431 ATCTCCTCCTCCGCACGG 60.835 66.667 1.73 1.73 0.00 4.94
4191 4488 2.415010 CATCTCCTCCTCCGCACG 59.585 66.667 0.00 0.00 0.00 5.34
4192 4489 1.109920 TAGCATCTCCTCCTCCGCAC 61.110 60.000 0.00 0.00 0.00 5.34
4193 4490 0.397114 TTAGCATCTCCTCCTCCGCA 60.397 55.000 0.00 0.00 0.00 5.69
4194 4491 0.316841 CTTAGCATCTCCTCCTCCGC 59.683 60.000 0.00 0.00 0.00 5.54
4195 4492 1.885887 CTCTTAGCATCTCCTCCTCCG 59.114 57.143 0.00 0.00 0.00 4.63
4196 4493 2.247358 CCTCTTAGCATCTCCTCCTCC 58.753 57.143 0.00 0.00 0.00 4.30
4197 4494 1.618343 GCCTCTTAGCATCTCCTCCTC 59.382 57.143 0.00 0.00 0.00 3.71
4198 4495 1.062581 TGCCTCTTAGCATCTCCTCCT 60.063 52.381 0.00 0.00 38.00 3.69
4199 4496 1.418334 TGCCTCTTAGCATCTCCTCC 58.582 55.000 0.00 0.00 38.00 4.30
4200 4497 2.433970 ACTTGCCTCTTAGCATCTCCTC 59.566 50.000 0.00 0.00 43.64 3.71
4201 4498 2.433970 GACTTGCCTCTTAGCATCTCCT 59.566 50.000 0.00 0.00 43.64 3.69
4202 4499 2.433970 AGACTTGCCTCTTAGCATCTCC 59.566 50.000 0.00 0.00 43.64 3.71
4203 4500 3.716601 GAGACTTGCCTCTTAGCATCTC 58.283 50.000 2.43 2.43 43.64 2.75
4204 4501 2.100584 CGAGACTTGCCTCTTAGCATCT 59.899 50.000 0.00 0.00 43.64 2.90
4205 4502 2.468831 CGAGACTTGCCTCTTAGCATC 58.531 52.381 0.00 0.00 43.64 3.91
4206 4503 1.472376 GCGAGACTTGCCTCTTAGCAT 60.472 52.381 2.95 0.00 43.64 3.79
4207 4504 0.108615 GCGAGACTTGCCTCTTAGCA 60.109 55.000 2.95 0.00 42.17 3.49
4208 4505 2.671854 GCGAGACTTGCCTCTTAGC 58.328 57.895 2.95 0.00 0.00 3.09
4226 4523 4.160635 GAACGACAATGGCGCCGG 62.161 66.667 23.90 16.53 0.00 6.13
4227 4524 4.499023 CGAACGACAATGGCGCCG 62.499 66.667 23.90 9.16 0.00 6.46
4228 4525 4.160635 CCGAACGACAATGGCGCC 62.161 66.667 22.73 22.73 0.00 6.53
4229 4526 4.160635 CCCGAACGACAATGGCGC 62.161 66.667 9.06 0.00 0.00 6.53
4230 4527 2.736682 GACCCGAACGACAATGGCG 61.737 63.158 7.07 7.07 0.00 5.69
4231 4528 1.359459 GAGACCCGAACGACAATGGC 61.359 60.000 0.00 0.00 0.00 4.40
4232 4529 0.739813 GGAGACCCGAACGACAATGG 60.740 60.000 0.00 0.00 0.00 3.16
4233 4530 0.037697 TGGAGACCCGAACGACAATG 60.038 55.000 0.00 0.00 34.29 2.82
4234 4531 0.246635 CTGGAGACCCGAACGACAAT 59.753 55.000 0.00 0.00 34.29 2.71
4235 4532 1.111116 ACTGGAGACCCGAACGACAA 61.111 55.000 0.00 0.00 34.29 3.18
4236 4533 1.529948 ACTGGAGACCCGAACGACA 60.530 57.895 0.00 0.00 34.29 4.35
4237 4534 1.080705 CACTGGAGACCCGAACGAC 60.081 63.158 0.00 0.00 34.29 4.34
4238 4535 1.228337 TCACTGGAGACCCGAACGA 60.228 57.895 0.00 0.00 34.29 3.85
4239 4536 1.213013 CTCACTGGAGACCCGAACG 59.787 63.158 0.00 0.00 44.26 3.95
4240 4537 2.654802 TCTCACTGGAGACCCGAAC 58.345 57.895 0.00 0.00 45.12 3.95
4248 4545 1.067000 CCACAGCTCTTCTCACTGGAG 60.067 57.143 0.00 0.00 42.80 3.86
4249 4546 0.972134 CCACAGCTCTTCTCACTGGA 59.028 55.000 0.00 0.00 35.70 3.86
4250 4547 0.036577 CCCACAGCTCTTCTCACTGG 60.037 60.000 0.00 0.00 35.70 4.00
4251 4548 0.036577 CCCCACAGCTCTTCTCACTG 60.037 60.000 0.00 0.00 37.45 3.66
4252 4549 1.835927 GCCCCACAGCTCTTCTCACT 61.836 60.000 0.00 0.00 0.00 3.41
4253 4550 1.376553 GCCCCACAGCTCTTCTCAC 60.377 63.158 0.00 0.00 0.00 3.51
4254 4551 2.947532 CGCCCCACAGCTCTTCTCA 61.948 63.158 0.00 0.00 0.00 3.27
4255 4552 2.125350 CGCCCCACAGCTCTTCTC 60.125 66.667 0.00 0.00 0.00 2.87
4256 4553 3.710722 CCGCCCCACAGCTCTTCT 61.711 66.667 0.00 0.00 0.00 2.85
4257 4554 3.254024 TTCCGCCCCACAGCTCTTC 62.254 63.158 0.00 0.00 0.00 2.87
4258 4555 3.249189 TTCCGCCCCACAGCTCTT 61.249 61.111 0.00 0.00 0.00 2.85
4259 4556 4.021925 GTTCCGCCCCACAGCTCT 62.022 66.667 0.00 0.00 0.00 4.09
4260 4557 4.329545 TGTTCCGCCCCACAGCTC 62.330 66.667 0.00 0.00 0.00 4.09
4261 4558 4.335647 CTGTTCCGCCCCACAGCT 62.336 66.667 0.00 0.00 34.33 4.24
4262 4559 4.329545 TCTGTTCCGCCCCACAGC 62.330 66.667 0.00 0.00 40.33 4.40
4263 4560 2.046892 CTCTGTTCCGCCCCACAG 60.047 66.667 0.00 0.00 41.65 3.66
4264 4561 2.847234 ACTCTGTTCCGCCCCACA 60.847 61.111 0.00 0.00 0.00 4.17
4265 4562 2.047179 GACTCTGTTCCGCCCCAC 60.047 66.667 0.00 0.00 0.00 4.61
4266 4563 3.691342 CGACTCTGTTCCGCCCCA 61.691 66.667 0.00 0.00 0.00 4.96
4271 4568 2.811317 GGCAGCGACTCTGTTCCG 60.811 66.667 0.00 0.00 44.66 4.30
4272 4569 1.739562 CTGGCAGCGACTCTGTTCC 60.740 63.158 0.00 0.00 44.66 3.62
4273 4570 1.739562 CCTGGCAGCGACTCTGTTC 60.740 63.158 9.56 0.00 44.66 3.18
4274 4571 2.164865 CTCCTGGCAGCGACTCTGTT 62.165 60.000 9.56 0.00 44.66 3.16
4275 4572 2.601666 TCCTGGCAGCGACTCTGT 60.602 61.111 9.56 0.00 44.66 3.41
4276 4573 2.183811 CTCCTGGCAGCGACTCTG 59.816 66.667 9.56 0.00 45.62 3.35
4277 4574 3.073735 CCTCCTGGCAGCGACTCT 61.074 66.667 9.56 0.00 0.00 3.24
4278 4575 4.154347 CCCTCCTGGCAGCGACTC 62.154 72.222 9.56 0.00 0.00 3.36
4288 4585 2.822643 TGACCAGTAGGGCCCTCCTG 62.823 65.000 32.50 32.50 45.14 3.86
4289 4586 2.537714 CTGACCAGTAGGGCCCTCCT 62.538 65.000 32.80 22.23 45.14 3.69
4290 4587 2.040606 TGACCAGTAGGGCCCTCC 59.959 66.667 32.80 19.60 45.14 4.30
4291 4588 2.736826 GCTGACCAGTAGGGCCCTC 61.737 68.421 32.80 20.32 45.14 4.30
4292 4589 2.689034 GCTGACCAGTAGGGCCCT 60.689 66.667 31.35 31.35 45.14 5.19
4293 4590 4.162690 CGCTGACCAGTAGGGCCC 62.163 72.222 16.46 16.46 45.14 5.80
4294 4591 3.075005 TCGCTGACCAGTAGGGCC 61.075 66.667 0.00 0.00 45.14 5.80
4295 4592 2.496817 CTCGCTGACCAGTAGGGC 59.503 66.667 0.00 0.00 46.36 5.19
4296 4593 2.290122 CTGCTCGCTGACCAGTAGGG 62.290 65.000 0.00 0.00 44.81 3.53
4297 4594 1.140589 CTGCTCGCTGACCAGTAGG 59.859 63.158 0.00 0.00 42.21 3.18
4298 4595 0.457509 CACTGCTCGCTGACCAGTAG 60.458 60.000 2.72 0.00 37.70 2.57
4299 4596 1.586541 CACTGCTCGCTGACCAGTA 59.413 57.895 2.72 0.00 37.70 2.74
4300 4597 2.341543 CACTGCTCGCTGACCAGT 59.658 61.111 2.72 2.09 40.22 4.00
4301 4598 2.433838 CCACTGCTCGCTGACCAG 60.434 66.667 2.72 0.00 0.00 4.00
4302 4599 3.226429 GACCACTGCTCGCTGACCA 62.226 63.158 2.72 0.00 0.00 4.02
4303 4600 2.433318 GACCACTGCTCGCTGACC 60.433 66.667 2.72 0.00 0.00 4.02
4304 4601 2.024319 GTGACCACTGCTCGCTGAC 61.024 63.158 2.72 0.00 0.00 3.51
4305 4602 2.340078 GTGACCACTGCTCGCTGA 59.660 61.111 2.72 0.00 0.00 4.26
4306 4603 2.740055 GGTGACCACTGCTCGCTG 60.740 66.667 0.00 0.00 0.00 5.18
4307 4604 4.363990 CGGTGACCACTGCTCGCT 62.364 66.667 1.11 0.00 0.00 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.