Multiple sequence alignment - TraesCS3D01G238200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G238200 chr3D 100.000 3830 0 0 1 3830 329521592 329517763 0.000000e+00 7073.0
1 TraesCS3D01G238200 chr3B 93.327 1019 48 8 1566 2572 427007497 427006487 0.000000e+00 1487.0
2 TraesCS3D01G238200 chr3B 83.377 764 71 33 2572 3302 427006406 427005666 0.000000e+00 656.0
3 TraesCS3D01G238200 chr3B 89.316 468 33 8 3369 3830 427005577 427005121 4.290000e-159 571.0
4 TraesCS3D01G238200 chr3A 92.560 1035 48 12 1568 2582 444546961 444545936 0.000000e+00 1458.0
5 TraesCS3D01G238200 chr3A 94.962 397 17 2 2572 2967 444545864 444545470 1.510000e-173 619.0
6 TraesCS3D01G238200 chr3A 93.220 413 25 3 3369 3779 444545088 444544677 4.230000e-169 604.0
7 TraesCS3D01G238200 chr3A 89.562 297 22 3 3006 3302 444545463 444545176 6.040000e-98 368.0
8 TraesCS3D01G238200 chr6A 81.528 877 145 11 11 884 176302513 176303375 0.000000e+00 706.0
9 TraesCS3D01G238200 chr4B 74.931 363 79 10 105 464 98951263 98951616 5.120000e-34 156.0
10 TraesCS3D01G238200 chr4B 74.091 220 53 4 14 231 445640588 445640371 1.900000e-13 87.9
11 TraesCS3D01G238200 chr6D 78.676 136 19 8 577 707 104828823 104828953 8.820000e-12 82.4
12 TraesCS3D01G238200 chr6D 84.416 77 10 2 577 652 104824593 104824668 1.480000e-09 75.0
13 TraesCS3D01G238200 chr2D 77.863 131 25 2 577 705 406254219 406254347 1.140000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G238200 chr3D 329517763 329521592 3829 True 7073.000000 7073 100.000000 1 3830 1 chr3D.!!$R1 3829
1 TraesCS3D01G238200 chr3B 427005121 427007497 2376 True 904.666667 1487 88.673333 1566 3830 3 chr3B.!!$R1 2264
2 TraesCS3D01G238200 chr3A 444544677 444546961 2284 True 762.250000 1458 92.576000 1568 3779 4 chr3A.!!$R1 2211
3 TraesCS3D01G238200 chr6A 176302513 176303375 862 False 706.000000 706 81.528000 11 884 1 chr6A.!!$F1 873

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 908 0.101399 CCGACGTCCTGAATCTCCAG 59.899 60.0 10.58 0.0 0.00 3.86 F
1174 1175 0.038343 TTGGCATTGGCGAAGAAAGC 60.038 50.0 5.68 0.0 42.47 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2578 2607 0.107993 CTGCGAATGCCCAGAGAAGA 60.108 55.0 0.00 0.00 41.78 2.87 R
2843 2972 0.250234 CGCCCCTTCAATCAGTCTGA 59.750 55.0 4.68 4.68 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.738480 CACGTCCGGGTTCCAGAA 59.262 61.111 0.00 0.00 0.00 3.02
36 37 1.517832 CGGGTTCCAGAAGATCGCT 59.482 57.895 0.00 0.00 0.00 4.93
46 47 2.552315 CAGAAGATCGCTACTCCTCCTC 59.448 54.545 0.00 0.00 0.00 3.71
51 52 0.394488 TCGCTACTCCTCCTCTGGTG 60.394 60.000 0.00 0.00 0.00 4.17
53 54 1.681486 GCTACTCCTCCTCTGGTGCC 61.681 65.000 0.00 0.00 0.00 5.01
57 58 0.468214 CTCCTCCTCTGGTGCCGATA 60.468 60.000 0.00 0.00 0.00 2.92
79 80 0.880278 CGGTAGGACAATGCATCCCG 60.880 60.000 0.00 0.00 36.86 5.14
81 82 1.541233 GGTAGGACAATGCATCCCGAG 60.541 57.143 0.00 0.00 36.86 4.63
102 103 2.639286 CTTGCGCCGCCAATATCC 59.361 61.111 6.63 0.00 0.00 2.59
113 114 4.315803 CCGCCAATATCCCTAACTAGTTG 58.684 47.826 18.56 8.05 0.00 3.16
117 118 4.039973 CCAATATCCCTAACTAGTTGCGGA 59.960 45.833 21.30 21.30 0.00 5.54
118 119 5.230942 CAATATCCCTAACTAGTTGCGGAG 58.769 45.833 22.61 12.06 0.00 4.63
119 120 2.226962 TCCCTAACTAGTTGCGGAGT 57.773 50.000 18.56 0.00 0.00 3.85
124 125 2.922740 AACTAGTTGCGGAGTCCAAA 57.077 45.000 7.48 0.00 0.00 3.28
135 136 1.993370 GGAGTCCAAACGTCGATCTTG 59.007 52.381 3.60 0.00 0.00 3.02
143 144 0.811915 ACGTCGATCTTGGTCTCCTG 59.188 55.000 0.00 0.00 0.00 3.86
159 160 4.056805 TGGAGACAGAGGATGGCC 57.943 61.111 0.00 0.00 37.86 5.36
164 165 0.904865 AGACAGAGGATGGCCGTTCA 60.905 55.000 5.89 0.00 37.86 3.18
165 166 0.460987 GACAGAGGATGGCCGTTCAG 60.461 60.000 5.89 0.00 39.96 3.02
168 169 0.324738 AGAGGATGGCCGTTCAGAGA 60.325 55.000 5.89 0.00 39.96 3.10
171 172 0.537188 GGATGGCCGTTCAGAGAGAA 59.463 55.000 0.00 0.00 0.00 2.87
172 173 1.066143 GGATGGCCGTTCAGAGAGAAA 60.066 52.381 0.00 0.00 38.13 2.52
182 183 5.402867 CCGTTCAGAGAGAAACAACTACTTC 59.597 44.000 0.00 0.00 38.13 3.01
185 186 4.278669 TCAGAGAGAAACAACTACTTCGCT 59.721 41.667 0.00 0.00 34.85 4.93
192 193 3.380479 ACAACTACTTCGCTTACTGCA 57.620 42.857 0.00 0.00 43.06 4.41
200 201 0.248661 TCGCTTACTGCAGATCGCTC 60.249 55.000 23.35 3.17 43.06 5.03
204 205 1.667154 TTACTGCAGATCGCTCCGCT 61.667 55.000 23.35 0.00 43.06 5.52
205 206 2.341807 TACTGCAGATCGCTCCGCTG 62.342 60.000 23.35 0.49 43.06 5.18
206 207 4.519437 TGCAGATCGCTCCGCTGG 62.519 66.667 10.16 0.00 43.06 4.85
213 214 2.172483 ATCGCTCCGCTGGTGAGTTT 62.172 55.000 1.66 0.00 32.31 2.66
220 221 2.399356 GCTGGTGAGTTTAGGCCGC 61.399 63.158 0.00 0.00 0.00 6.53
225 226 2.263540 GAGTTTAGGCCGCGGACA 59.736 61.111 36.60 17.28 0.00 4.02
234 235 2.406616 GCCGCGGACATTCCAACAT 61.407 57.895 33.48 0.00 35.91 2.71
279 280 1.202580 GGGACACAGATGATTCCTCCG 60.203 57.143 5.03 0.00 0.00 4.63
296 297 8.651589 ATTCCTCCGATGACTATCATTACTAA 57.348 34.615 0.00 0.00 37.20 2.24
303 304 7.044181 CGATGACTATCATTACTAATGGGCAT 58.956 38.462 8.62 6.72 37.20 4.40
325 326 4.622260 AAAGCCAAGCAAATACACCATT 57.378 36.364 0.00 0.00 0.00 3.16
328 329 3.770933 AGCCAAGCAAATACACCATTCAT 59.229 39.130 0.00 0.00 0.00 2.57
341 342 2.224719 ACCATTCATCTAGCATGGGAGC 60.225 50.000 12.19 0.00 44.28 4.70
364 365 1.076995 GTGACCACCAATAGGCCCC 60.077 63.158 0.00 0.00 39.06 5.80
367 368 1.543896 ACCACCAATAGGCCCCAGT 60.544 57.895 0.00 0.00 39.06 4.00
369 370 0.923358 CCACCAATAGGCCCCAGTAA 59.077 55.000 0.00 0.00 39.06 2.24
377 378 1.228337 GGCCCCAGTAAACACCGTT 60.228 57.895 0.00 0.00 0.00 4.44
387 388 0.321298 AAACACCGTTGCCGAGCTAT 60.321 50.000 0.00 0.00 35.63 2.97
389 390 1.883084 CACCGTTGCCGAGCTATCC 60.883 63.158 0.00 0.00 35.63 2.59
392 393 1.437573 CGTTGCCGAGCTATCCTCA 59.562 57.895 0.00 0.00 40.78 3.86
393 394 0.872021 CGTTGCCGAGCTATCCTCAC 60.872 60.000 0.00 0.00 40.78 3.51
406 407 6.769512 AGCTATCCTCACAACTAAAACTGAA 58.230 36.000 0.00 0.00 0.00 3.02
408 409 7.335422 AGCTATCCTCACAACTAAAACTGAATG 59.665 37.037 0.00 0.00 0.00 2.67
413 414 8.836413 TCCTCACAACTAAAACTGAATGTAAAG 58.164 33.333 0.00 0.00 0.00 1.85
426 427 7.324178 ACTGAATGTAAAGCTACTGAACCTAG 58.676 38.462 0.00 0.00 0.00 3.02
467 468 2.959275 CGCCATCGGAGACTACAAC 58.041 57.895 0.00 0.00 42.51 3.32
468 469 0.172578 CGCCATCGGAGACTACAACA 59.827 55.000 0.00 0.00 42.51 3.33
469 470 1.403647 CGCCATCGGAGACTACAACAA 60.404 52.381 0.00 0.00 42.51 2.83
470 471 2.695359 GCCATCGGAGACTACAACAAA 58.305 47.619 0.00 0.00 42.51 2.83
471 472 2.673368 GCCATCGGAGACTACAACAAAG 59.327 50.000 0.00 0.00 42.51 2.77
472 473 3.616560 GCCATCGGAGACTACAACAAAGA 60.617 47.826 0.00 0.00 42.51 2.52
473 474 3.927142 CCATCGGAGACTACAACAAAGAC 59.073 47.826 0.00 0.00 42.51 3.01
474 475 4.322049 CCATCGGAGACTACAACAAAGACT 60.322 45.833 0.00 0.00 42.51 3.24
475 476 5.105877 CCATCGGAGACTACAACAAAGACTA 60.106 44.000 0.00 0.00 42.51 2.59
490 491 8.398665 CAACAAAGACTAATACAATAGAAGGGC 58.601 37.037 0.00 0.00 0.00 5.19
492 493 7.092399 ACAAAGACTAATACAATAGAAGGGCCT 60.092 37.037 0.00 0.00 0.00 5.19
493 494 7.453141 AAGACTAATACAATAGAAGGGCCTT 57.547 36.000 21.09 21.09 0.00 4.35
494 495 7.068686 AGACTAATACAATAGAAGGGCCTTC 57.931 40.000 34.20 34.20 40.45 3.46
510 511 3.067833 GCCTTCCTATCATCGCTAAACC 58.932 50.000 0.00 0.00 0.00 3.27
541 542 4.479993 CAGCTCCTTCTGGCCCCG 62.480 72.222 0.00 0.00 0.00 5.73
574 575 3.741476 CCAGCAGGGCGTCTTTGC 61.741 66.667 8.65 8.65 38.09 3.68
576 577 2.670934 AGCAGGGCGTCTTTGCTG 60.671 61.111 16.61 2.94 45.75 4.41
617 618 0.807667 GCGATGATGTCCGCTTCAGT 60.808 55.000 0.00 0.00 46.96 3.41
621 622 0.247460 TGATGTCCGCTTCAGTGAGG 59.753 55.000 0.00 0.00 0.00 3.86
635 636 4.856607 GAGGGGCTCGTCGAAGCG 62.857 72.222 3.13 0.00 43.45 4.68
651 652 3.257561 CGCTTGATCAGGGCGTCG 61.258 66.667 26.19 11.20 43.28 5.12
655 656 0.803768 CTTGATCAGGGCGTCGACAG 60.804 60.000 17.16 9.59 0.00 3.51
670 671 2.300152 TCGACAGCTTTCTTGGTCATCT 59.700 45.455 0.00 0.00 0.00 2.90
675 676 4.070716 CAGCTTTCTTGGTCATCTTGTCT 58.929 43.478 0.00 0.00 0.00 3.41
676 677 4.153835 CAGCTTTCTTGGTCATCTTGTCTC 59.846 45.833 0.00 0.00 0.00 3.36
677 678 3.438434 GCTTTCTTGGTCATCTTGTCTCC 59.562 47.826 0.00 0.00 0.00 3.71
681 682 0.615331 TGGTCATCTTGTCTCCTGGC 59.385 55.000 0.00 0.00 0.00 4.85
689 690 3.474570 GTCTCCTGGCCCGAGCAT 61.475 66.667 11.31 0.00 42.56 3.79
707 708 1.630126 ATGCCCAGCTCCTTGACGAT 61.630 55.000 0.00 0.00 0.00 3.73
708 709 1.522580 GCCCAGCTCCTTGACGATC 60.523 63.158 0.00 0.00 0.00 3.69
711 712 1.513158 CAGCTCCTTGACGATCCGT 59.487 57.895 0.00 0.00 45.10 4.69
714 715 0.595310 GCTCCTTGACGATCCGTAGC 60.595 60.000 0.00 0.00 41.37 3.58
720 721 4.570663 ACGATCCGTAGCGCAGCC 62.571 66.667 11.47 0.00 45.19 4.85
762 763 2.347490 GAGTTCTTGGCCTGGCGA 59.653 61.111 13.40 5.79 0.00 5.54
799 800 0.460987 CACGGAGGTTGCTCTGGATC 60.461 60.000 0.00 0.00 34.19 3.36
800 801 1.227089 CGGAGGTTGCTCTGGATCG 60.227 63.158 0.00 0.00 0.00 3.69
804 805 2.109126 GGTTGCTCTGGATCGTGGC 61.109 63.158 0.00 0.00 0.00 5.01
808 809 3.842923 CTCTGGATCGTGGCGGCT 61.843 66.667 11.43 0.00 0.00 5.52
813 814 2.419198 GATCGTGGCGGCTCTGAT 59.581 61.111 11.43 13.41 0.00 2.90
814 815 1.660355 GATCGTGGCGGCTCTGATA 59.340 57.895 11.43 0.00 0.00 2.15
822 823 2.844839 GGCTCTGATAGGCGGGGT 60.845 66.667 0.00 0.00 41.50 4.95
823 824 2.423446 GCTCTGATAGGCGGGGTG 59.577 66.667 0.00 0.00 0.00 4.61
825 826 1.457643 CTCTGATAGGCGGGGTGGA 60.458 63.158 0.00 0.00 0.00 4.02
826 827 1.457643 TCTGATAGGCGGGGTGGAG 60.458 63.158 0.00 0.00 0.00 3.86
873 874 4.082523 TCCTTGAAGAGGCGGCGG 62.083 66.667 9.78 0.00 45.87 6.13
900 901 4.717629 CAGCGCCGACGTCCTGAA 62.718 66.667 10.58 0.00 42.83 3.02
901 902 3.760035 AGCGCCGACGTCCTGAAT 61.760 61.111 10.58 0.00 42.83 2.57
902 903 3.255379 GCGCCGACGTCCTGAATC 61.255 66.667 10.58 0.00 42.83 2.52
903 904 2.490217 CGCCGACGTCCTGAATCT 59.510 61.111 10.58 0.00 33.53 2.40
904 905 1.586564 CGCCGACGTCCTGAATCTC 60.587 63.158 10.58 0.00 33.53 2.75
905 906 1.227002 GCCGACGTCCTGAATCTCC 60.227 63.158 10.58 0.00 0.00 3.71
906 907 1.945354 GCCGACGTCCTGAATCTCCA 61.945 60.000 10.58 0.00 0.00 3.86
907 908 0.101399 CCGACGTCCTGAATCTCCAG 59.899 60.000 10.58 0.00 0.00 3.86
908 909 1.095600 CGACGTCCTGAATCTCCAGA 58.904 55.000 10.58 0.00 36.29 3.86
909 910 1.064803 CGACGTCCTGAATCTCCAGAG 59.935 57.143 10.58 0.00 36.29 3.35
910 911 2.096248 GACGTCCTGAATCTCCAGAGT 58.904 52.381 3.51 0.00 36.29 3.24
911 912 1.821753 ACGTCCTGAATCTCCAGAGTG 59.178 52.381 0.00 0.00 36.29 3.51
912 913 1.470632 CGTCCTGAATCTCCAGAGTGC 60.471 57.143 0.00 0.00 36.29 4.40
913 914 0.820226 TCCTGAATCTCCAGAGTGCG 59.180 55.000 0.00 0.00 36.29 5.34
914 915 0.534412 CCTGAATCTCCAGAGTGCGT 59.466 55.000 0.00 0.00 36.29 5.24
915 916 1.751351 CCTGAATCTCCAGAGTGCGTA 59.249 52.381 0.00 0.00 36.29 4.42
916 917 2.480416 CCTGAATCTCCAGAGTGCGTAC 60.480 54.545 0.00 0.00 36.29 3.67
917 918 1.476891 TGAATCTCCAGAGTGCGTACC 59.523 52.381 0.00 0.00 0.00 3.34
918 919 1.751924 GAATCTCCAGAGTGCGTACCT 59.248 52.381 0.00 0.00 0.00 3.08
919 920 1.107114 ATCTCCAGAGTGCGTACCTG 58.893 55.000 12.77 12.77 0.00 4.00
920 921 1.153745 CTCCAGAGTGCGTACCTGC 60.154 63.158 13.82 0.00 0.00 4.85
921 922 1.599606 CTCCAGAGTGCGTACCTGCT 61.600 60.000 13.82 1.95 35.36 4.24
922 923 1.446792 CCAGAGTGCGTACCTGCTG 60.447 63.158 13.82 12.12 35.36 4.41
923 924 2.097038 CAGAGTGCGTACCTGCTGC 61.097 63.158 0.00 0.00 35.36 5.25
924 925 3.181967 GAGTGCGTACCTGCTGCG 61.182 66.667 0.00 0.00 35.36 5.18
925 926 3.916392 GAGTGCGTACCTGCTGCGT 62.916 63.158 0.00 0.00 35.36 5.24
926 927 3.041940 GTGCGTACCTGCTGCGTT 61.042 61.111 0.00 0.00 35.36 4.84
927 928 1.735198 GTGCGTACCTGCTGCGTTA 60.735 57.895 0.00 0.00 35.36 3.18
928 929 1.735198 TGCGTACCTGCTGCGTTAC 60.735 57.895 0.00 0.00 35.36 2.50
929 930 2.450345 GCGTACCTGCTGCGTTACC 61.450 63.158 0.00 0.00 0.00 2.85
930 931 2.156446 CGTACCTGCTGCGTTACCG 61.156 63.158 0.00 0.00 37.07 4.02
940 941 3.474806 CGTTACCGCTCCAAGCTG 58.525 61.111 0.00 0.00 39.60 4.24
941 942 2.100631 CGTTACCGCTCCAAGCTGG 61.101 63.158 0.00 7.84 39.60 4.85
942 943 1.295423 GTTACCGCTCCAAGCTGGA 59.705 57.895 13.94 2.11 45.98 3.86
943 944 1.019805 GTTACCGCTCCAAGCTGGAC 61.020 60.000 13.94 1.72 42.67 4.02
944 945 2.180159 TTACCGCTCCAAGCTGGACC 62.180 60.000 13.94 0.00 42.67 4.46
945 946 3.710722 CCGCTCCAAGCTGGACCT 61.711 66.667 0.00 0.00 42.67 3.85
946 947 2.125350 CGCTCCAAGCTGGACCTC 60.125 66.667 0.00 0.00 42.67 3.85
947 948 2.270527 GCTCCAAGCTGGACCTCC 59.729 66.667 0.00 0.00 42.67 4.30
948 949 2.596851 GCTCCAAGCTGGACCTCCA 61.597 63.158 0.00 0.00 42.67 3.86
949 950 1.298014 CTCCAAGCTGGACCTCCAC 59.702 63.158 0.00 0.00 42.67 4.02
950 951 2.190488 CTCCAAGCTGGACCTCCACC 62.190 65.000 0.00 0.00 42.67 4.61
951 952 2.046892 CAAGCTGGACCTCCACCG 60.047 66.667 0.00 0.00 42.01 4.94
952 953 2.526873 AAGCTGGACCTCCACCGT 60.527 61.111 0.00 0.00 42.01 4.83
953 954 2.883828 AAGCTGGACCTCCACCGTG 61.884 63.158 0.00 0.00 42.01 4.94
954 955 3.626924 GCTGGACCTCCACCGTGT 61.627 66.667 0.00 0.00 42.01 4.49
955 956 2.343758 CTGGACCTCCACCGTGTG 59.656 66.667 0.00 0.00 42.01 3.82
981 982 4.947147 GCGGGGTGTGGCAGTTGA 62.947 66.667 0.00 0.00 0.00 3.18
982 983 2.203280 CGGGGTGTGGCAGTTGAA 60.203 61.111 0.00 0.00 0.00 2.69
983 984 2.551912 CGGGGTGTGGCAGTTGAAC 61.552 63.158 0.00 0.00 0.00 3.18
984 985 1.152756 GGGGTGTGGCAGTTGAACT 60.153 57.895 0.00 0.00 0.00 3.01
986 987 1.455383 GGGTGTGGCAGTTGAACTGG 61.455 60.000 25.00 8.65 46.01 4.00
991 992 3.359002 GCAGTTGAACTGGCCTGG 58.641 61.111 25.00 4.64 46.01 4.45
992 993 2.270986 GCAGTTGAACTGGCCTGGG 61.271 63.158 25.00 0.00 46.01 4.45
993 994 2.116125 AGTTGAACTGGCCTGGGC 59.884 61.111 14.23 14.23 41.06 5.36
994 995 2.116125 GTTGAACTGGCCTGGGCT 59.884 61.111 21.72 0.22 41.60 5.19
995 996 2.115910 TTGAACTGGCCTGGGCTG 59.884 61.111 22.70 22.70 41.60 4.85
996 997 3.512154 TTGAACTGGCCTGGGCTGG 62.512 63.158 26.60 18.65 41.60 4.85
997 998 3.650950 GAACTGGCCTGGGCTGGA 61.651 66.667 26.60 5.41 41.60 3.86
998 999 3.185203 AACTGGCCTGGGCTGGAA 61.185 61.111 26.60 5.06 41.60 3.53
999 1000 3.215587 AACTGGCCTGGGCTGGAAG 62.216 63.158 26.60 16.05 41.60 3.46
1000 1001 3.333219 CTGGCCTGGGCTGGAAGA 61.333 66.667 21.72 0.00 41.60 2.87
1001 1002 2.614969 TGGCCTGGGCTGGAAGAT 60.615 61.111 21.72 0.00 41.60 2.40
1002 1003 2.123982 GGCCTGGGCTGGAAGATG 60.124 66.667 13.80 0.00 41.60 2.90
1003 1004 2.123982 GCCTGGGCTGGAAGATGG 60.124 66.667 4.12 0.00 38.26 3.51
1004 1005 2.599597 CCTGGGCTGGAAGATGGG 59.400 66.667 0.00 0.00 34.07 4.00
1005 1006 2.123982 CTGGGCTGGAAGATGGGC 60.124 66.667 0.00 0.00 34.07 5.36
1006 1007 3.728292 CTGGGCTGGAAGATGGGCC 62.728 68.421 0.00 0.00 44.50 5.80
1007 1008 3.743017 GGGCTGGAAGATGGGCCA 61.743 66.667 9.61 9.61 45.68 5.36
1010 1011 2.123982 CTGGAAGATGGGCCAGCC 60.124 66.667 19.93 13.90 44.53 4.85
1011 1012 2.940467 TGGAAGATGGGCCAGCCA 60.940 61.111 19.93 16.40 37.98 4.75
1012 1013 2.123982 GGAAGATGGGCCAGCCAG 60.124 66.667 19.93 0.00 37.98 4.85
1013 1014 2.683465 GGAAGATGGGCCAGCCAGA 61.683 63.158 19.93 0.00 37.98 3.86
1014 1015 1.153005 GAAGATGGGCCAGCCAGAG 60.153 63.158 19.93 0.00 37.98 3.35
1015 1016 1.919600 GAAGATGGGCCAGCCAGAGT 61.920 60.000 19.93 0.00 37.98 3.24
1016 1017 1.504275 AAGATGGGCCAGCCAGAGTT 61.504 55.000 19.93 2.26 37.98 3.01
1017 1018 1.751927 GATGGGCCAGCCAGAGTTG 60.752 63.158 11.60 0.00 37.98 3.16
1018 1019 3.292481 ATGGGCCAGCCAGAGTTGG 62.292 63.158 13.78 0.00 46.67 3.77
1027 1028 3.986970 CCAGAGTTGGCCCAAAAAC 57.013 52.632 0.00 0.00 37.73 2.43
1028 1029 1.118838 CCAGAGTTGGCCCAAAAACA 58.881 50.000 0.00 0.00 37.73 2.83
1029 1030 1.693606 CCAGAGTTGGCCCAAAAACAT 59.306 47.619 0.00 0.00 37.73 2.71
1030 1031 2.289010 CCAGAGTTGGCCCAAAAACATC 60.289 50.000 0.00 0.00 37.73 3.06
1031 1032 2.364970 CAGAGTTGGCCCAAAAACATCA 59.635 45.455 0.00 0.00 0.00 3.07
1032 1033 2.629617 AGAGTTGGCCCAAAAACATCAG 59.370 45.455 0.00 0.00 0.00 2.90
1033 1034 1.070601 AGTTGGCCCAAAAACATCAGC 59.929 47.619 0.00 0.00 0.00 4.26
1034 1035 0.396060 TTGGCCCAAAAACATCAGCC 59.604 50.000 0.00 0.00 40.87 4.85
1035 1036 1.079888 GGCCCAAAAACATCAGCCG 60.080 57.895 0.00 0.00 0.00 5.52
1036 1037 1.079888 GCCCAAAAACATCAGCCGG 60.080 57.895 0.00 0.00 0.00 6.13
1037 1038 1.079888 CCCAAAAACATCAGCCGGC 60.080 57.895 21.89 21.89 0.00 6.13
1038 1039 1.079888 CCAAAAACATCAGCCGGCC 60.080 57.895 26.15 5.07 0.00 6.13
1039 1040 1.079888 CAAAAACATCAGCCGGCCC 60.080 57.895 26.15 0.00 0.00 5.80
1040 1041 1.532794 AAAAACATCAGCCGGCCCA 60.533 52.632 26.15 10.76 0.00 5.36
1041 1042 1.535204 AAAAACATCAGCCGGCCCAG 61.535 55.000 26.15 14.33 0.00 4.45
1042 1043 2.713531 AAAACATCAGCCGGCCCAGT 62.714 55.000 26.15 14.49 0.00 4.00
1043 1044 2.713531 AAACATCAGCCGGCCCAGTT 62.714 55.000 26.15 19.76 0.00 3.16
1044 1045 3.136123 CATCAGCCGGCCCAGTTG 61.136 66.667 26.15 15.25 0.00 3.16
1053 1054 2.919328 GCCCAGTTGCCTTGGCTT 60.919 61.111 13.18 0.00 44.30 4.35
1054 1055 3.053828 CCCAGTTGCCTTGGCTTG 58.946 61.111 13.18 8.43 34.26 4.01
1055 1056 2.341176 CCAGTTGCCTTGGCTTGC 59.659 61.111 13.18 3.30 0.00 4.01
1056 1057 2.500714 CCAGTTGCCTTGGCTTGCA 61.501 57.895 13.18 0.00 35.27 4.08
1057 1058 1.669440 CAGTTGCCTTGGCTTGCAT 59.331 52.632 13.18 0.00 37.33 3.96
1058 1059 0.389426 CAGTTGCCTTGGCTTGCATC 60.389 55.000 13.18 0.00 37.33 3.91
1059 1060 0.541296 AGTTGCCTTGGCTTGCATCT 60.541 50.000 13.18 0.00 37.33 2.90
1060 1061 0.319405 GTTGCCTTGGCTTGCATCTT 59.681 50.000 13.18 0.00 37.33 2.40
1061 1062 0.604578 TTGCCTTGGCTTGCATCTTC 59.395 50.000 13.18 0.00 37.33 2.87
1062 1063 1.138247 GCCTTGGCTTGCATCTTCG 59.862 57.895 4.11 0.00 0.00 3.79
1063 1064 1.308069 GCCTTGGCTTGCATCTTCGA 61.308 55.000 4.11 0.00 0.00 3.71
1064 1065 0.731417 CCTTGGCTTGCATCTTCGAG 59.269 55.000 0.00 0.00 0.00 4.04
1065 1066 1.676916 CCTTGGCTTGCATCTTCGAGA 60.677 52.381 0.00 0.00 0.00 4.04
1066 1067 2.079158 CTTGGCTTGCATCTTCGAGAA 58.921 47.619 0.00 0.00 0.00 2.87
1067 1068 1.442769 TGGCTTGCATCTTCGAGAAC 58.557 50.000 0.00 0.00 0.00 3.01
1068 1069 1.002430 TGGCTTGCATCTTCGAGAACT 59.998 47.619 0.00 0.00 0.00 3.01
1069 1070 1.396301 GGCTTGCATCTTCGAGAACTG 59.604 52.381 0.00 0.00 0.00 3.16
1070 1071 1.396301 GCTTGCATCTTCGAGAACTGG 59.604 52.381 0.00 0.00 0.00 4.00
1071 1072 2.932622 GCTTGCATCTTCGAGAACTGGA 60.933 50.000 0.00 0.00 0.00 3.86
1072 1073 2.662006 TGCATCTTCGAGAACTGGAG 57.338 50.000 0.00 0.00 0.00 3.86
1073 1074 1.205655 TGCATCTTCGAGAACTGGAGG 59.794 52.381 0.00 0.00 0.00 4.30
1074 1075 1.472376 GCATCTTCGAGAACTGGAGGG 60.472 57.143 0.00 0.00 0.00 4.30
1075 1076 1.137872 CATCTTCGAGAACTGGAGGGG 59.862 57.143 0.00 0.00 0.00 4.79
1076 1077 0.614979 TCTTCGAGAACTGGAGGGGG 60.615 60.000 0.00 0.00 0.00 5.40
1077 1078 2.245438 CTTCGAGAACTGGAGGGGGC 62.245 65.000 0.00 0.00 0.00 5.80
1078 1079 2.685380 CGAGAACTGGAGGGGGCT 60.685 66.667 0.00 0.00 0.00 5.19
1079 1080 2.993853 GAGAACTGGAGGGGGCTG 59.006 66.667 0.00 0.00 0.00 4.85
1080 1081 2.612115 AGAACTGGAGGGGGCTGG 60.612 66.667 0.00 0.00 0.00 4.85
1081 1082 2.610859 GAACTGGAGGGGGCTGGA 60.611 66.667 0.00 0.00 0.00 3.86
1082 1083 2.612115 AACTGGAGGGGGCTGGAG 60.612 66.667 0.00 0.00 0.00 3.86
1083 1084 3.194025 AACTGGAGGGGGCTGGAGA 62.194 63.158 0.00 0.00 0.00 3.71
1084 1085 3.086600 CTGGAGGGGGCTGGAGAC 61.087 72.222 0.00 0.00 0.00 3.36
1085 1086 4.741239 TGGAGGGGGCTGGAGACC 62.741 72.222 0.00 0.00 44.61 3.85
1094 1095 2.888863 CTGGAGACCAGCTCGTCC 59.111 66.667 7.95 0.70 45.13 4.79
1095 1096 1.979155 CTGGAGACCAGCTCGTCCA 60.979 63.158 7.95 5.39 45.13 4.02
1096 1097 2.219325 CTGGAGACCAGCTCGTCCAC 62.219 65.000 7.95 2.14 45.13 4.02
1097 1098 2.574399 GAGACCAGCTCGTCCACC 59.426 66.667 7.95 0.00 33.17 4.61
1098 1099 3.343788 GAGACCAGCTCGTCCACCG 62.344 68.421 7.95 0.00 33.17 4.94
1099 1100 3.681835 GACCAGCTCGTCCACCGT 61.682 66.667 0.00 0.00 37.94 4.83
1100 1101 3.916392 GACCAGCTCGTCCACCGTG 62.916 68.421 0.00 0.00 37.94 4.94
1101 1102 4.742201 CCAGCTCGTCCACCGTGG 62.742 72.222 11.73 11.73 39.43 4.94
1105 1106 4.436998 CTCGTCCACCGTGGCCTC 62.437 72.222 13.19 0.00 37.47 4.70
1108 1109 4.394712 GTCCACCGTGGCCTCCAG 62.395 72.222 13.19 0.00 37.47 3.86
1111 1112 4.767255 CACCGTGGCCTCCAGCTC 62.767 72.222 3.32 0.00 43.05 4.09
1113 1114 4.463879 CCGTGGCCTCCAGCTCAG 62.464 72.222 3.32 0.00 43.05 3.35
1115 1116 4.792804 GTGGCCTCCAGCTCAGCC 62.793 72.222 3.32 5.99 45.96 4.85
1120 1121 4.172512 CTCCAGCTCAGCCGCCAT 62.173 66.667 0.00 0.00 0.00 4.40
1121 1122 4.478371 TCCAGCTCAGCCGCCATG 62.478 66.667 0.00 0.00 0.00 3.66
1126 1127 3.200593 CTCAGCCGCCATGCAGTC 61.201 66.667 0.00 0.00 0.00 3.51
1127 1128 3.963687 CTCAGCCGCCATGCAGTCA 62.964 63.158 0.00 0.00 0.00 3.41
1128 1129 3.057548 CAGCCGCCATGCAGTCAA 61.058 61.111 0.00 0.00 0.00 3.18
1129 1130 3.058160 AGCCGCCATGCAGTCAAC 61.058 61.111 0.00 0.00 0.00 3.18
1130 1131 4.465512 GCCGCCATGCAGTCAACG 62.466 66.667 0.00 0.00 0.00 4.10
1131 1132 4.465512 CCGCCATGCAGTCAACGC 62.466 66.667 0.00 0.00 0.00 4.84
1132 1133 4.799473 CGCCATGCAGTCAACGCG 62.799 66.667 3.53 3.53 37.42 6.01
1133 1134 4.465512 GCCATGCAGTCAACGCGG 62.466 66.667 12.47 0.00 0.00 6.46
1134 1135 3.049674 CCATGCAGTCAACGCGGT 61.050 61.111 12.47 0.00 0.00 5.68
1135 1136 2.476051 CATGCAGTCAACGCGGTC 59.524 61.111 12.47 0.00 0.00 4.79
1136 1137 3.112075 ATGCAGTCAACGCGGTCG 61.112 61.111 12.47 0.00 42.43 4.79
1139 1140 3.112075 CAGTCAACGCGGTCGCAT 61.112 61.111 12.47 0.00 42.06 4.73
1140 1141 3.112075 AGTCAACGCGGTCGCATG 61.112 61.111 12.47 12.82 42.06 4.06
1141 1142 4.147322 GTCAACGCGGTCGCATGG 62.147 66.667 12.47 0.00 42.06 3.66
1148 1149 3.055719 CGGTCGCATGGCTTGGTT 61.056 61.111 2.33 0.00 0.00 3.67
1149 1150 2.568090 GGTCGCATGGCTTGGTTG 59.432 61.111 2.33 0.00 0.00 3.77
1150 1151 2.568090 GTCGCATGGCTTGGTTGG 59.432 61.111 2.33 0.00 0.00 3.77
1151 1152 1.971167 GTCGCATGGCTTGGTTGGA 60.971 57.895 2.33 0.00 0.00 3.53
1152 1153 1.971167 TCGCATGGCTTGGTTGGAC 60.971 57.895 2.33 0.00 0.00 4.02
1153 1154 2.568090 GCATGGCTTGGTTGGACG 59.432 61.111 2.33 0.00 0.00 4.79
1154 1155 2.568090 CATGGCTTGGTTGGACGC 59.432 61.111 0.00 0.00 0.00 5.19
1155 1156 1.973281 CATGGCTTGGTTGGACGCT 60.973 57.895 0.00 0.00 0.00 5.07
1156 1157 1.228552 ATGGCTTGGTTGGACGCTT 60.229 52.632 0.00 0.00 0.00 4.68
1157 1158 1.526575 ATGGCTTGGTTGGACGCTTG 61.527 55.000 0.00 0.00 0.00 4.01
1158 1159 2.644992 GCTTGGTTGGACGCTTGG 59.355 61.111 0.00 0.00 0.00 3.61
1159 1160 2.644992 CTTGGTTGGACGCTTGGC 59.355 61.111 0.00 0.00 0.00 4.52
1160 1161 2.124109 TTGGTTGGACGCTTGGCA 60.124 55.556 0.00 0.00 0.00 4.92
1161 1162 1.526575 CTTGGTTGGACGCTTGGCAT 61.527 55.000 0.00 0.00 0.00 4.40
1162 1163 1.112315 TTGGTTGGACGCTTGGCATT 61.112 50.000 0.00 0.00 0.00 3.56
1163 1164 1.080569 GGTTGGACGCTTGGCATTG 60.081 57.895 0.00 0.00 0.00 2.82
1164 1165 1.080569 GTTGGACGCTTGGCATTGG 60.081 57.895 0.00 0.00 0.00 3.16
1165 1166 2.929903 TTGGACGCTTGGCATTGGC 61.930 57.895 2.73 2.73 40.13 4.52
1174 1175 0.038343 TTGGCATTGGCGAAGAAAGC 60.038 50.000 5.68 0.00 42.47 3.51
1175 1176 1.514873 GGCATTGGCGAAGAAAGCG 60.515 57.895 0.00 0.00 42.47 4.68
1176 1177 1.210155 GCATTGGCGAAGAAAGCGT 59.790 52.632 0.00 0.00 35.00 5.07
1177 1178 0.794605 GCATTGGCGAAGAAAGCGTC 60.795 55.000 0.00 0.00 35.00 5.19
1178 1179 0.179189 CATTGGCGAAGAAAGCGTCC 60.179 55.000 0.00 0.00 35.00 4.79
1179 1180 0.605319 ATTGGCGAAGAAAGCGTCCA 60.605 50.000 0.00 0.00 34.72 4.02
1180 1181 1.503818 TTGGCGAAGAAAGCGTCCAC 61.504 55.000 0.00 0.00 35.69 4.02
1181 1182 2.470286 GCGAAGAAAGCGTCCACG 59.530 61.111 0.00 0.00 43.27 4.94
1182 1183 3.011760 GCGAAGAAAGCGTCCACGG 62.012 63.158 0.55 0.00 40.23 4.94
1183 1184 2.380410 CGAAGAAAGCGTCCACGGG 61.380 63.158 0.55 0.00 40.23 5.28
1184 1185 2.032071 AAGAAAGCGTCCACGGGG 59.968 61.111 0.00 0.00 40.23 5.73
1185 1186 2.726822 GAAGAAAGCGTCCACGGGGT 62.727 60.000 2.12 0.00 40.23 4.95
1186 1187 2.726822 AAGAAAGCGTCCACGGGGTC 62.727 60.000 2.12 0.00 40.23 4.46
1187 1188 4.675029 AAAGCGTCCACGGGGTCG 62.675 66.667 19.36 19.36 46.49 4.79
1225 1226 4.748144 CCTGGGGCCTTGCTGGTC 62.748 72.222 0.84 0.00 40.45 4.02
1248 1249 3.710722 CAGGGACAGGAGCGGCTT 61.711 66.667 2.97 0.00 0.00 4.35
1249 1250 3.394836 AGGGACAGGAGCGGCTTC 61.395 66.667 2.97 0.48 0.00 3.86
1250 1251 4.475135 GGGACAGGAGCGGCTTCC 62.475 72.222 2.97 6.94 37.52 3.46
1252 1253 2.665603 GACAGGAGCGGCTTCCTT 59.334 61.111 15.44 9.30 45.35 3.36
1253 1254 1.743252 GACAGGAGCGGCTTCCTTG 60.743 63.158 15.44 8.36 45.35 3.61
1254 1255 3.130160 CAGGAGCGGCTTCCTTGC 61.130 66.667 15.44 0.00 45.35 4.01
1255 1256 3.325753 AGGAGCGGCTTCCTTGCT 61.326 61.111 2.97 0.00 45.35 3.91
1256 1257 3.130160 GGAGCGGCTTCCTTGCTG 61.130 66.667 2.97 0.00 39.49 4.41
1257 1258 3.130160 GAGCGGCTTCCTTGCTGG 61.130 66.667 2.97 0.00 39.49 4.85
1258 1259 3.612247 GAGCGGCTTCCTTGCTGGA 62.612 63.158 2.97 0.00 44.51 3.86
1265 1266 2.935481 TCCTTGCTGGAGTGGGGG 60.935 66.667 0.00 0.00 40.56 5.40
1266 1267 4.748144 CCTTGCTGGAGTGGGGGC 62.748 72.222 0.00 0.00 38.35 5.80
1267 1268 3.655211 CTTGCTGGAGTGGGGGCT 61.655 66.667 0.00 0.00 0.00 5.19
1268 1269 3.185203 TTGCTGGAGTGGGGGCTT 61.185 61.111 0.00 0.00 0.00 4.35
1269 1270 3.210012 TTGCTGGAGTGGGGGCTTC 62.210 63.158 0.00 0.00 0.00 3.86
1270 1271 3.334054 GCTGGAGTGGGGGCTTCT 61.334 66.667 0.00 0.00 0.00 2.85
1271 1272 2.673523 CTGGAGTGGGGGCTTCTG 59.326 66.667 0.00 0.00 0.00 3.02
1272 1273 3.635268 CTGGAGTGGGGGCTTCTGC 62.635 68.421 0.00 0.00 38.76 4.26
1273 1274 3.650950 GGAGTGGGGGCTTCTGCA 61.651 66.667 0.00 0.00 41.91 4.41
1274 1275 2.679716 GAGTGGGGGCTTCTGCAT 59.320 61.111 0.00 0.00 41.91 3.96
1275 1276 1.452833 GAGTGGGGGCTTCTGCATC 60.453 63.158 0.00 0.00 41.91 3.91
1276 1277 1.919600 GAGTGGGGGCTTCTGCATCT 61.920 60.000 0.00 0.00 41.91 2.90
1277 1278 1.751927 GTGGGGGCTTCTGCATCTG 60.752 63.158 0.00 0.00 41.91 2.90
1278 1279 2.832201 GGGGGCTTCTGCATCTGC 60.832 66.667 0.00 0.00 41.91 4.26
1279 1280 2.274760 GGGGCTTCTGCATCTGCT 59.725 61.111 3.53 0.00 42.66 4.24
1280 1281 2.119655 GGGGCTTCTGCATCTGCTG 61.120 63.158 3.53 3.22 42.66 4.41
1288 1289 4.881057 GCATCTGCTGCCATCTCT 57.119 55.556 0.00 0.00 45.66 3.10
1289 1290 2.619362 GCATCTGCTGCCATCTCTC 58.381 57.895 0.00 0.00 45.66 3.20
1290 1291 0.885596 GCATCTGCTGCCATCTCTCC 60.886 60.000 0.00 0.00 45.66 3.71
1291 1292 0.759959 CATCTGCTGCCATCTCTCCT 59.240 55.000 0.00 0.00 0.00 3.69
1292 1293 0.759959 ATCTGCTGCCATCTCTCCTG 59.240 55.000 0.00 0.00 0.00 3.86
1293 1294 0.616964 TCTGCTGCCATCTCTCCTGT 60.617 55.000 0.00 0.00 0.00 4.00
1294 1295 0.462225 CTGCTGCCATCTCTCCTGTG 60.462 60.000 0.00 0.00 0.00 3.66
1295 1296 1.153208 GCTGCCATCTCTCCTGTGG 60.153 63.158 0.00 0.00 36.09 4.17
1298 1299 2.202987 CCATCTCTCCTGTGGCGC 60.203 66.667 0.00 0.00 0.00 6.53
1299 1300 2.202987 CATCTCTCCTGTGGCGCC 60.203 66.667 22.73 22.73 0.00 6.53
1300 1301 2.364842 ATCTCTCCTGTGGCGCCT 60.365 61.111 29.70 0.00 0.00 5.52
1301 1302 1.992277 ATCTCTCCTGTGGCGCCTT 60.992 57.895 29.70 0.00 0.00 4.35
1302 1303 1.965754 ATCTCTCCTGTGGCGCCTTC 61.966 60.000 29.70 20.58 0.00 3.46
1303 1304 3.672295 CTCTCCTGTGGCGCCTTCC 62.672 68.421 29.70 15.93 0.00 3.46
1304 1305 4.020617 CTCCTGTGGCGCCTTCCA 62.021 66.667 29.70 19.70 0.00 3.53
1305 1306 3.965539 CTCCTGTGGCGCCTTCCAG 62.966 68.421 29.70 26.86 36.67 3.86
1333 1334 3.182312 GCTCCGCTGCCTTTCTTC 58.818 61.111 0.00 0.00 0.00 2.87
1334 1335 2.402572 GCTCCGCTGCCTTTCTTCC 61.403 63.158 0.00 0.00 0.00 3.46
1335 1336 2.047274 TCCGCTGCCTTTCTTCCG 60.047 61.111 0.00 0.00 0.00 4.30
1336 1337 3.127533 CCGCTGCCTTTCTTCCGG 61.128 66.667 0.00 0.00 0.00 5.14
1337 1338 3.127533 CGCTGCCTTTCTTCCGGG 61.128 66.667 0.00 0.00 0.00 5.73
1338 1339 2.751837 GCTGCCTTTCTTCCGGGG 60.752 66.667 0.00 0.00 0.00 5.73
1339 1340 2.751837 CTGCCTTTCTTCCGGGGC 60.752 66.667 9.96 9.96 44.31 5.80
1340 1341 4.360405 TGCCTTTCTTCCGGGGCC 62.360 66.667 13.72 0.00 43.50 5.80
1341 1342 4.048470 GCCTTTCTTCCGGGGCCT 62.048 66.667 0.84 0.00 38.77 5.19
1342 1343 2.763902 CCTTTCTTCCGGGGCCTT 59.236 61.111 0.84 0.00 0.00 4.35
1343 1344 1.996086 CCTTTCTTCCGGGGCCTTA 59.004 57.895 0.84 0.00 0.00 2.69
1344 1345 0.551396 CCTTTCTTCCGGGGCCTTAT 59.449 55.000 0.84 0.00 0.00 1.73
1345 1346 1.063942 CCTTTCTTCCGGGGCCTTATT 60.064 52.381 0.84 0.00 0.00 1.40
1346 1347 2.298610 CTTTCTTCCGGGGCCTTATTC 58.701 52.381 0.84 0.00 0.00 1.75
1347 1348 1.591768 TTCTTCCGGGGCCTTATTCT 58.408 50.000 0.84 0.00 0.00 2.40
1348 1349 1.591768 TCTTCCGGGGCCTTATTCTT 58.408 50.000 0.84 0.00 0.00 2.52
1349 1350 1.211949 TCTTCCGGGGCCTTATTCTTG 59.788 52.381 0.84 0.00 0.00 3.02
1350 1351 0.395173 TTCCGGGGCCTTATTCTTGC 60.395 55.000 0.84 0.00 0.00 4.01
1351 1352 1.828224 CCGGGGCCTTATTCTTGCC 60.828 63.158 0.84 0.00 44.59 4.52
1354 1355 4.657952 GGCCTTATTCTTGCCCGT 57.342 55.556 0.00 0.00 39.30 5.28
1355 1356 2.882170 GGCCTTATTCTTGCCCGTT 58.118 52.632 0.00 0.00 39.30 4.44
1356 1357 1.182667 GGCCTTATTCTTGCCCGTTT 58.817 50.000 0.00 0.00 39.30 3.60
1357 1358 1.134367 GGCCTTATTCTTGCCCGTTTC 59.866 52.381 0.00 0.00 39.30 2.78
1358 1359 1.134367 GCCTTATTCTTGCCCGTTTCC 59.866 52.381 0.00 0.00 0.00 3.13
1359 1360 2.723273 CCTTATTCTTGCCCGTTTCCT 58.277 47.619 0.00 0.00 0.00 3.36
1360 1361 3.089284 CCTTATTCTTGCCCGTTTCCTT 58.911 45.455 0.00 0.00 0.00 3.36
1361 1362 3.119495 CCTTATTCTTGCCCGTTTCCTTG 60.119 47.826 0.00 0.00 0.00 3.61
1362 1363 1.256812 ATTCTTGCCCGTTTCCTTGG 58.743 50.000 0.00 0.00 0.00 3.61
1363 1364 1.460273 TTCTTGCCCGTTTCCTTGGC 61.460 55.000 0.00 0.00 45.56 4.52
1364 1365 1.903404 CTTGCCCGTTTCCTTGGCT 60.903 57.895 0.00 0.00 45.56 4.75
1365 1366 2.146073 CTTGCCCGTTTCCTTGGCTG 62.146 60.000 0.00 0.00 45.56 4.85
1366 1367 3.373565 GCCCGTTTCCTTGGCTGG 61.374 66.667 0.00 0.00 42.01 4.85
1367 1368 2.434331 CCCGTTTCCTTGGCTGGA 59.566 61.111 0.00 0.00 0.00 3.86
1368 1369 1.675641 CCCGTTTCCTTGGCTGGAG 60.676 63.158 0.66 0.00 37.43 3.86
1369 1370 2.335712 CCGTTTCCTTGGCTGGAGC 61.336 63.158 0.00 0.00 37.43 4.70
1370 1371 1.600636 CGTTTCCTTGGCTGGAGCA 60.601 57.895 0.20 0.00 44.36 4.26
1371 1372 0.962356 CGTTTCCTTGGCTGGAGCAT 60.962 55.000 0.20 0.00 44.36 3.79
1372 1373 0.529378 GTTTCCTTGGCTGGAGCATG 59.471 55.000 0.20 0.00 44.36 4.06
1373 1374 0.612732 TTTCCTTGGCTGGAGCATGG 60.613 55.000 0.20 0.00 44.36 3.66
1374 1375 3.145551 CCTTGGCTGGAGCATGGC 61.146 66.667 0.20 0.00 44.36 4.40
1375 1376 2.361992 CTTGGCTGGAGCATGGCA 60.362 61.111 0.20 0.00 44.36 4.92
1376 1377 2.677524 TTGGCTGGAGCATGGCAC 60.678 61.111 0.20 0.00 44.36 5.01
1380 1381 4.415150 CTGGAGCATGGCACGGGT 62.415 66.667 0.00 0.00 0.00 5.28
1381 1382 3.925630 CTGGAGCATGGCACGGGTT 62.926 63.158 0.00 0.00 0.00 4.11
1382 1383 3.443045 GGAGCATGGCACGGGTTG 61.443 66.667 0.00 0.00 0.00 3.77
1403 1404 4.063967 CCACGTCCCAGCAGCGTA 62.064 66.667 0.00 0.00 37.07 4.42
1404 1405 2.184322 CACGTCCCAGCAGCGTAT 59.816 61.111 0.00 0.00 37.07 3.06
1405 1406 1.878522 CACGTCCCAGCAGCGTATC 60.879 63.158 0.00 0.00 37.07 2.24
1406 1407 2.279517 CGTCCCAGCAGCGTATCC 60.280 66.667 0.00 0.00 0.00 2.59
1407 1408 2.109181 GTCCCAGCAGCGTATCCC 59.891 66.667 0.00 0.00 0.00 3.85
1408 1409 2.041922 TCCCAGCAGCGTATCCCT 60.042 61.111 0.00 0.00 0.00 4.20
1409 1410 2.134287 TCCCAGCAGCGTATCCCTC 61.134 63.158 0.00 0.00 0.00 4.30
1410 1411 2.423446 CCAGCAGCGTATCCCTCC 59.577 66.667 0.00 0.00 0.00 4.30
1411 1412 2.434843 CCAGCAGCGTATCCCTCCA 61.435 63.158 0.00 0.00 0.00 3.86
1412 1413 1.068753 CAGCAGCGTATCCCTCCAG 59.931 63.158 0.00 0.00 0.00 3.86
1413 1414 2.136878 AGCAGCGTATCCCTCCAGG 61.137 63.158 0.00 0.00 0.00 4.45
1438 1439 4.222847 GCCGGACCCGTCTCCATC 62.223 72.222 5.05 0.00 37.81 3.51
1439 1440 2.442272 CCGGACCCGTCTCCATCT 60.442 66.667 0.00 0.00 37.81 2.90
1440 1441 2.058595 CCGGACCCGTCTCCATCTT 61.059 63.158 0.00 0.00 37.81 2.40
1441 1442 1.141881 CGGACCCGTCTCCATCTTG 59.858 63.158 0.00 0.00 34.35 3.02
1442 1443 1.522569 GGACCCGTCTCCATCTTGG 59.477 63.158 0.00 0.00 39.43 3.61
1443 1444 1.265454 GGACCCGTCTCCATCTTGGT 61.265 60.000 0.00 0.00 39.03 3.67
1444 1445 0.175989 GACCCGTCTCCATCTTGGTC 59.824 60.000 0.00 0.00 39.03 4.02
1445 1446 1.141881 CCCGTCTCCATCTTGGTCG 59.858 63.158 0.00 0.00 39.03 4.79
1446 1447 1.519455 CCGTCTCCATCTTGGTCGC 60.519 63.158 0.00 0.00 39.03 5.19
1447 1448 1.874019 CGTCTCCATCTTGGTCGCG 60.874 63.158 0.00 0.00 39.03 5.87
1448 1449 1.519455 GTCTCCATCTTGGTCGCGG 60.519 63.158 6.13 0.00 39.03 6.46
1449 1450 1.680989 TCTCCATCTTGGTCGCGGA 60.681 57.895 6.13 0.00 39.03 5.54
1450 1451 1.227089 CTCCATCTTGGTCGCGGAG 60.227 63.158 6.13 0.00 39.03 4.63
1451 1452 2.892425 CCATCTTGGTCGCGGAGC 60.892 66.667 6.13 3.32 41.47 4.70
1495 1496 4.767255 GCCCGAGCTCACCACAGG 62.767 72.222 15.40 5.28 35.50 4.00
1496 1497 3.314331 CCCGAGCTCACCACAGGT 61.314 66.667 15.40 0.00 35.62 4.00
1506 1507 4.655647 CCACAGGTGGCTGCTGCT 62.656 66.667 15.64 0.00 44.73 4.24
1507 1508 3.362797 CACAGGTGGCTGCTGCTG 61.363 66.667 15.64 8.16 39.59 4.41
1508 1509 4.655647 ACAGGTGGCTGCTGCTGG 62.656 66.667 15.64 3.68 39.59 4.85
1542 1543 2.669569 GCTGCTGCCCGTCTTCAA 60.670 61.111 3.85 0.00 0.00 2.69
1543 1544 2.970974 GCTGCTGCCCGTCTTCAAC 61.971 63.158 3.85 0.00 0.00 3.18
1544 1545 2.281484 TGCTGCCCGTCTTCAACC 60.281 61.111 0.00 0.00 0.00 3.77
1545 1546 2.032681 GCTGCCCGTCTTCAACCT 59.967 61.111 0.00 0.00 0.00 3.50
1546 1547 1.600916 GCTGCCCGTCTTCAACCTT 60.601 57.895 0.00 0.00 0.00 3.50
1547 1548 1.578206 GCTGCCCGTCTTCAACCTTC 61.578 60.000 0.00 0.00 0.00 3.46
1548 1549 0.250295 CTGCCCGTCTTCAACCTTCA 60.250 55.000 0.00 0.00 0.00 3.02
1549 1550 0.400213 TGCCCGTCTTCAACCTTCAT 59.600 50.000 0.00 0.00 0.00 2.57
1550 1551 0.804989 GCCCGTCTTCAACCTTCATG 59.195 55.000 0.00 0.00 0.00 3.07
1551 1552 1.453155 CCCGTCTTCAACCTTCATGG 58.547 55.000 0.00 0.00 42.93 3.66
1560 1561 4.326255 CCTTCATGGTCCAGGTGC 57.674 61.111 2.95 0.00 0.00 5.01
1561 1562 1.379044 CCTTCATGGTCCAGGTGCC 60.379 63.158 2.95 0.00 0.00 5.01
1562 1563 1.379044 CTTCATGGTCCAGGTGCCC 60.379 63.158 2.95 0.00 0.00 5.36
1563 1564 3.266686 TTCATGGTCCAGGTGCCCG 62.267 63.158 2.95 0.00 0.00 6.13
1564 1565 4.802051 CATGGTCCAGGTGCCCGG 62.802 72.222 0.00 0.00 0.00 5.73
1606 1607 5.984695 ATGTACATCGTGCCATAGTATCT 57.015 39.130 1.41 0.00 0.00 1.98
1608 1609 5.769367 TGTACATCGTGCCATAGTATCTTC 58.231 41.667 0.00 0.00 0.00 2.87
1630 1631 5.107133 TCGGAATTACTTCACGGATCTTTC 58.893 41.667 0.00 0.00 32.70 2.62
1721 1722 1.539065 CGAAGCCCTGCGAGTTCATAT 60.539 52.381 0.00 0.00 0.00 1.78
1723 1724 2.821991 AGCCCTGCGAGTTCATATAC 57.178 50.000 0.00 0.00 0.00 1.47
1890 1898 2.504026 CGCTACGTTGAGCTCGCA 60.504 61.111 9.64 0.00 40.51 5.10
2108 2116 4.778143 GATGGCGCCCCTGTTCGT 62.778 66.667 26.77 0.00 0.00 3.85
2115 2123 3.047877 CCCCTGTTCGTTGCCGTC 61.048 66.667 0.00 0.00 35.01 4.79
2125 2133 4.243008 TTGCCGTCGCCCTTGACA 62.243 61.111 0.00 0.00 38.84 3.58
2225 2239 0.953960 GAGACCGGCGTTGTGGAATT 60.954 55.000 6.01 0.00 0.00 2.17
2228 2242 2.566010 CGGCGTTGTGGAATTGGG 59.434 61.111 0.00 0.00 0.00 4.12
2233 2247 0.887933 CGTTGTGGAATTGGGGAAGG 59.112 55.000 0.00 0.00 0.00 3.46
2234 2248 0.608130 GTTGTGGAATTGGGGAAGGC 59.392 55.000 0.00 0.00 0.00 4.35
2236 2250 2.052104 GTGGAATTGGGGAAGGCGG 61.052 63.158 0.00 0.00 0.00 6.13
2237 2251 2.235028 TGGAATTGGGGAAGGCGGA 61.235 57.895 0.00 0.00 0.00 5.54
2370 2390 2.137177 TTTCCCCGGGGCTTCTTCAG 62.137 60.000 36.68 8.12 34.68 3.02
2475 2498 3.769844 TCCTAGCAAGGGAAGTTAGTGAG 59.230 47.826 0.00 0.00 43.84 3.51
2529 2552 4.079615 ACATCAAGGGTGGAATCATCATCA 60.080 41.667 0.00 0.00 0.00 3.07
2548 2571 2.672874 TCAACATGTGCGAGCAAGATAC 59.327 45.455 0.00 0.00 0.00 2.24
2562 2591 3.433598 GCAAGATACCTGGGACTGCAATA 60.434 47.826 0.00 0.00 0.00 1.90
2578 2607 3.762779 GCAATAAAAGAGTGCGCATCTT 58.237 40.909 15.91 19.78 39.73 2.40
2716 2829 4.806640 TTGATGAAGAAAGGAAATGGCC 57.193 40.909 0.00 0.00 0.00 5.36
2744 2858 2.056906 AACTGCAGGGTGTGTCCTCC 62.057 60.000 19.93 0.00 34.31 4.30
2823 2952 8.227791 ACTAATTGTTACACAAATGTTAGCTCG 58.772 33.333 0.00 0.00 41.96 5.03
2835 2964 2.159421 TGTTAGCTCGGAGTAAAGCTCG 60.159 50.000 6.90 0.00 45.57 5.03
2843 2972 5.335035 GCTCGGAGTAAAGCTCGTATCTATT 60.335 44.000 6.90 0.00 45.03 1.73
2882 3011 4.933400 GGCGAGGTTCATTCTTTGTAGTTA 59.067 41.667 0.00 0.00 0.00 2.24
2885 3014 6.402226 GCGAGGTTCATTCTTTGTAGTTAAGG 60.402 42.308 0.00 0.00 0.00 2.69
2960 3089 0.176680 ACGGCTGCTGATGGAACTAG 59.823 55.000 16.72 0.00 0.00 2.57
2961 3090 0.176680 CGGCTGCTGATGGAACTAGT 59.823 55.000 1.17 0.00 0.00 2.57
2962 3091 1.804372 CGGCTGCTGATGGAACTAGTC 60.804 57.143 1.17 0.00 0.00 2.59
2963 3092 1.484240 GGCTGCTGATGGAACTAGTCT 59.516 52.381 0.00 0.00 0.00 3.24
2964 3093 2.548875 GCTGCTGATGGAACTAGTCTG 58.451 52.381 0.00 0.00 0.00 3.51
2965 3094 2.741228 GCTGCTGATGGAACTAGTCTGG 60.741 54.545 0.00 0.00 0.00 3.86
2966 3095 2.499289 CTGCTGATGGAACTAGTCTGGT 59.501 50.000 0.00 0.00 0.00 4.00
2967 3096 2.497675 TGCTGATGGAACTAGTCTGGTC 59.502 50.000 0.00 0.00 0.00 4.02
2976 3105 3.080300 ACTAGTCTGGTCTCTGGTGAG 57.920 52.381 0.00 0.00 41.51 3.51
2989 3118 0.249120 TGGTGAGTCAGTATTGGGCG 59.751 55.000 0.00 0.00 0.00 6.13
3029 3158 6.848562 ACCTCCTCTGGAACCATTATTAAT 57.151 37.500 0.00 0.00 0.00 1.40
3030 3159 7.947782 ACCTCCTCTGGAACCATTATTAATA 57.052 36.000 0.00 0.00 0.00 0.98
3032 3161 8.787818 ACCTCCTCTGGAACCATTATTAATAAA 58.212 33.333 11.80 0.00 0.00 1.40
3033 3162 9.067986 CCTCCTCTGGAACCATTATTAATAAAC 57.932 37.037 11.80 2.70 0.00 2.01
3034 3163 9.627123 CTCCTCTGGAACCATTATTAATAAACA 57.373 33.333 11.80 4.60 0.00 2.83
3066 3195 5.415415 AACAATGATTCGAAGCATAGCTC 57.585 39.130 27.49 7.49 38.25 4.09
3140 3299 7.011016 TCACTGAGTACCATTATGCAAAATACG 59.989 37.037 0.00 0.00 0.00 3.06
3184 3343 6.827727 ACATTATTACGCTCCAGGTATTCTT 58.172 36.000 0.00 0.00 0.00 2.52
3210 3369 6.707440 TGTGTTCTTTTTCTAGGAATGCAA 57.293 33.333 0.00 0.00 0.00 4.08
3267 3426 6.873605 TGCGTAGGATCAATTAGACATAATGG 59.126 38.462 0.00 0.00 31.81 3.16
3345 3555 3.264947 TCGATCAAGATGGTGCTCTTTG 58.735 45.455 0.00 0.00 33.18 2.77
3346 3556 2.353889 CGATCAAGATGGTGCTCTTTGG 59.646 50.000 0.00 0.00 33.18 3.28
3347 3557 1.538047 TCAAGATGGTGCTCTTTGGC 58.462 50.000 0.00 0.00 33.18 4.52
3348 3558 1.074405 TCAAGATGGTGCTCTTTGGCT 59.926 47.619 0.00 0.00 33.18 4.75
3349 3559 1.471684 CAAGATGGTGCTCTTTGGCTC 59.528 52.381 0.00 0.00 33.18 4.70
3350 3560 0.990374 AGATGGTGCTCTTTGGCTCT 59.010 50.000 0.00 0.00 0.00 4.09
3351 3561 1.065564 AGATGGTGCTCTTTGGCTCTC 60.066 52.381 0.00 0.00 0.00 3.20
3352 3562 0.990374 ATGGTGCTCTTTGGCTCTCT 59.010 50.000 0.00 0.00 0.00 3.10
3353 3563 0.767375 TGGTGCTCTTTGGCTCTCTT 59.233 50.000 0.00 0.00 0.00 2.85
3354 3564 1.143684 TGGTGCTCTTTGGCTCTCTTT 59.856 47.619 0.00 0.00 0.00 2.52
3355 3565 2.234143 GGTGCTCTTTGGCTCTCTTTT 58.766 47.619 0.00 0.00 0.00 2.27
3356 3566 2.625314 GGTGCTCTTTGGCTCTCTTTTT 59.375 45.455 0.00 0.00 0.00 1.94
3383 3593 4.968719 TGGGAATACTCTTTGGCTCTATCA 59.031 41.667 0.00 0.00 0.00 2.15
3470 3685 5.367945 TGTCTCCCTTTTGAACACTACTT 57.632 39.130 0.00 0.00 0.00 2.24
3506 3721 6.421377 TGATTGTTCCATGTTCTCGTATTG 57.579 37.500 0.00 0.00 0.00 1.90
3507 3722 5.353956 TGATTGTTCCATGTTCTCGTATTGG 59.646 40.000 0.00 0.00 0.00 3.16
3511 3726 2.159156 TCCATGTTCTCGTATTGGACCG 60.159 50.000 0.00 0.00 31.67 4.79
3522 3737 3.546020 CGTATTGGACCGCAAAGCTTATG 60.546 47.826 0.00 1.67 0.00 1.90
3525 3740 0.179163 GGACCGCAAAGCTTATGTGC 60.179 55.000 10.91 10.91 34.87 4.57
3530 3745 1.887320 GCAAAGCTTATGTGCGAGTG 58.113 50.000 0.00 0.00 38.13 3.51
3537 3752 3.815401 AGCTTATGTGCGAGTGAAGTTTT 59.185 39.130 0.00 0.00 38.13 2.43
3538 3753 3.908382 GCTTATGTGCGAGTGAAGTTTTG 59.092 43.478 0.00 0.00 0.00 2.44
3595 3810 8.598916 TGGTAACTCTTTTAGGACACATAATCA 58.401 33.333 0.00 0.00 37.61 2.57
3794 4009 1.815003 CCATTCTCTTTGGTGTCAGCC 59.185 52.381 0.00 0.00 0.00 4.85
3805 4020 1.003839 TGTCAGCCAACGATGACCC 60.004 57.895 6.09 0.00 44.19 4.46
3806 4021 1.745489 GTCAGCCAACGATGACCCC 60.745 63.158 0.00 0.00 39.94 4.95
3811 4026 0.966179 GCCAACGATGACCCCTTTTT 59.034 50.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.048127 GACGTGGCCACTCACCTC 60.048 66.667 32.28 14.90 34.36 3.85
1 2 3.626924 GGACGTGGCCACTCACCT 61.627 66.667 32.28 10.20 34.36 4.00
15 16 0.179108 CGATCTTCTGGAACCCGGAC 60.179 60.000 0.73 0.00 38.83 4.79
19 20 1.757699 AGTAGCGATCTTCTGGAACCC 59.242 52.381 0.00 0.00 0.00 4.11
25 26 2.552315 GAGGAGGAGTAGCGATCTTCTG 59.448 54.545 0.00 0.00 0.00 3.02
29 30 1.202879 CCAGAGGAGGAGTAGCGATCT 60.203 57.143 0.00 0.00 0.00 2.75
36 37 1.379977 CGGCACCAGAGGAGGAGTA 60.380 63.158 0.00 0.00 0.00 2.59
53 54 1.935300 GCATTGTCCTACCGGCTATCG 60.935 57.143 0.00 0.00 38.88 2.92
57 58 0.179045 GATGCATTGTCCTACCGGCT 60.179 55.000 0.00 0.00 0.00 5.52
63 64 1.688735 CTCTCGGGATGCATTGTCCTA 59.311 52.381 0.00 0.00 36.00 2.94
68 69 0.465097 AAGCCTCTCGGGATGCATTG 60.465 55.000 15.26 0.00 35.92 2.82
69 70 0.465097 CAAGCCTCTCGGGATGCATT 60.465 55.000 15.26 3.70 35.92 3.56
85 86 2.639286 GGATATTGGCGGCGCAAG 59.361 61.111 34.36 3.20 43.44 4.01
93 94 3.746492 CGCAACTAGTTAGGGATATTGGC 59.254 47.826 8.04 2.60 0.00 4.52
95 96 5.209818 TCCGCAACTAGTTAGGGATATTG 57.790 43.478 21.97 5.50 0.00 1.90
96 97 4.900054 ACTCCGCAACTAGTTAGGGATATT 59.100 41.667 20.95 10.34 0.00 1.28
99 100 2.694109 GACTCCGCAACTAGTTAGGGAT 59.306 50.000 20.95 13.35 0.00 3.85
102 103 1.822990 TGGACTCCGCAACTAGTTAGG 59.177 52.381 18.36 18.36 0.00 2.69
113 114 1.411493 GATCGACGTTTGGACTCCGC 61.411 60.000 0.00 0.00 0.00 5.54
117 118 1.343465 ACCAAGATCGACGTTTGGACT 59.657 47.619 23.58 6.58 43.15 3.85
118 119 1.725164 GACCAAGATCGACGTTTGGAC 59.275 52.381 23.58 16.66 43.15 4.02
119 120 1.616865 AGACCAAGATCGACGTTTGGA 59.383 47.619 23.58 5.29 43.15 3.53
124 125 0.811915 CAGGAGACCAAGATCGACGT 59.188 55.000 0.00 0.00 0.00 4.34
143 144 1.617947 AACGGCCATCCTCTGTCTCC 61.618 60.000 2.24 0.00 0.00 3.71
153 154 2.003301 GTTTCTCTCTGAACGGCCATC 58.997 52.381 2.24 0.03 33.88 3.51
156 157 1.531578 GTTGTTTCTCTCTGAACGGCC 59.468 52.381 0.00 0.00 33.88 6.13
158 159 4.872664 AGTAGTTGTTTCTCTCTGAACGG 58.127 43.478 0.00 0.00 33.88 4.44
159 160 5.115773 CGAAGTAGTTGTTTCTCTCTGAACG 59.884 44.000 0.00 0.00 33.88 3.95
164 165 4.857509 AGCGAAGTAGTTGTTTCTCTCT 57.142 40.909 0.00 0.00 0.00 3.10
165 166 6.088350 CAGTAAGCGAAGTAGTTGTTTCTCTC 59.912 42.308 0.00 0.00 0.00 3.20
168 169 4.448060 GCAGTAAGCGAAGTAGTTGTTTCT 59.552 41.667 0.00 0.00 0.00 2.52
200 201 1.745489 GGCCTAAACTCACCAGCGG 60.745 63.158 0.00 0.00 0.00 5.52
204 205 2.047655 CGCGGCCTAAACTCACCA 60.048 61.111 0.00 0.00 0.00 4.17
205 206 2.818274 CCGCGGCCTAAACTCACC 60.818 66.667 14.67 0.00 0.00 4.02
206 207 2.098831 GTCCGCGGCCTAAACTCAC 61.099 63.158 23.51 6.11 0.00 3.51
213 214 2.661066 TTGGAATGTCCGCGGCCTA 61.661 57.895 23.51 9.74 40.17 3.93
234 235 4.991776 TGAATGACAACCCACCAATTCTA 58.008 39.130 0.00 0.00 0.00 2.10
267 268 5.651387 TGATAGTCATCGGAGGAATCATC 57.349 43.478 0.00 0.00 33.51 2.92
274 275 7.261325 CCATTAGTAATGATAGTCATCGGAGG 58.739 42.308 22.03 0.00 41.46 4.30
279 280 9.890629 TTATGCCCATTAGTAATGATAGTCATC 57.109 33.333 22.03 4.74 41.46 2.92
303 304 5.244851 TGAATGGTGTATTTGCTTGGCTTTA 59.755 36.000 0.00 0.00 0.00 1.85
306 307 3.164268 TGAATGGTGTATTTGCTTGGCT 58.836 40.909 0.00 0.00 0.00 4.75
309 310 6.183360 TGCTAGATGAATGGTGTATTTGCTTG 60.183 38.462 0.00 0.00 0.00 4.01
311 312 5.439721 TGCTAGATGAATGGTGTATTTGCT 58.560 37.500 0.00 0.00 0.00 3.91
313 314 6.675026 CCATGCTAGATGAATGGTGTATTTG 58.325 40.000 0.00 0.00 45.16 2.32
325 326 0.395686 GCTGCTCCCATGCTAGATGA 59.604 55.000 0.00 0.00 0.00 2.92
328 329 2.800541 CCGCTGCTCCCATGCTAGA 61.801 63.158 0.00 0.00 0.00 2.43
377 378 0.175760 GTTGTGAGGATAGCTCGGCA 59.824 55.000 0.00 0.00 0.00 5.69
387 388 8.740123 TTTACATTCAGTTTTAGTTGTGAGGA 57.260 30.769 0.00 0.00 0.00 3.71
389 390 8.345565 AGCTTTACATTCAGTTTTAGTTGTGAG 58.654 33.333 0.00 0.00 0.00 3.51
392 393 9.338622 AGTAGCTTTACATTCAGTTTTAGTTGT 57.661 29.630 0.00 0.00 0.00 3.32
393 394 9.599322 CAGTAGCTTTACATTCAGTTTTAGTTG 57.401 33.333 0.00 0.00 0.00 3.16
413 414 2.545731 GCTTGAGCTAGGTTCAGTAGC 58.454 52.381 0.00 0.00 42.85 3.58
426 427 1.805910 GCCTTAAGCTGGCTTGAGC 59.194 57.895 17.84 13.31 46.38 4.26
449 450 0.172578 TGTTGTAGTCTCCGATGGCG 59.827 55.000 0.00 0.00 37.24 5.69
464 465 8.398665 GCCCTTCTATTGTATTAGTCTTTGTTG 58.601 37.037 0.00 0.00 0.00 3.33
465 466 7.556635 GGCCCTTCTATTGTATTAGTCTTTGTT 59.443 37.037 0.00 0.00 0.00 2.83
466 467 7.054751 GGCCCTTCTATTGTATTAGTCTTTGT 58.945 38.462 0.00 0.00 0.00 2.83
467 468 7.283329 AGGCCCTTCTATTGTATTAGTCTTTG 58.717 38.462 0.00 0.00 0.00 2.77
468 469 7.453141 AGGCCCTTCTATTGTATTAGTCTTT 57.547 36.000 0.00 0.00 0.00 2.52
469 470 7.420330 GGAAGGCCCTTCTATTGTATTAGTCTT 60.420 40.741 22.35 0.00 40.07 3.01
470 471 6.043358 GGAAGGCCCTTCTATTGTATTAGTCT 59.957 42.308 22.35 0.00 40.07 3.24
471 472 6.043358 AGGAAGGCCCTTCTATTGTATTAGTC 59.957 42.308 22.35 1.76 44.85 2.59
472 473 5.911766 AGGAAGGCCCTTCTATTGTATTAGT 59.088 40.000 22.35 0.00 44.85 2.24
473 474 6.441088 AGGAAGGCCCTTCTATTGTATTAG 57.559 41.667 22.35 0.00 44.85 1.73
474 475 7.737607 TGATAGGAAGGCCCTTCTATTGTATTA 59.262 37.037 22.35 6.97 44.85 0.98
475 476 6.562608 TGATAGGAAGGCCCTTCTATTGTATT 59.437 38.462 22.35 0.51 44.85 1.89
483 484 1.974236 CGATGATAGGAAGGCCCTTCT 59.026 52.381 22.35 11.30 44.85 2.85
485 486 0.398318 GCGATGATAGGAAGGCCCTT 59.602 55.000 0.00 0.00 44.85 3.95
490 491 4.608948 AGGTTTAGCGATGATAGGAAGG 57.391 45.455 0.00 0.00 0.00 3.46
492 493 4.703897 CCAAGGTTTAGCGATGATAGGAA 58.296 43.478 0.00 0.00 0.00 3.36
493 494 3.494398 GCCAAGGTTTAGCGATGATAGGA 60.494 47.826 0.00 0.00 0.00 2.94
494 495 2.808543 GCCAAGGTTTAGCGATGATAGG 59.191 50.000 0.00 0.00 0.00 2.57
503 504 1.017387 CGATGAGGCCAAGGTTTAGC 58.983 55.000 5.01 0.00 0.00 3.09
563 564 3.567473 GTCTCAGCAAAGACGCCC 58.433 61.111 3.13 0.00 36.61 6.13
574 575 2.505777 CAGGCTCACGCGTCTCAG 60.506 66.667 9.86 6.93 36.88 3.35
590 591 1.595109 GACATCATCGCCATCGCCA 60.595 57.895 0.00 0.00 35.26 5.69
592 593 2.661566 CGGACATCATCGCCATCGC 61.662 63.158 0.00 0.00 35.26 4.58
594 595 3.248029 GCGGACATCATCGCCATC 58.752 61.111 0.00 0.00 45.42 3.51
600 601 2.200067 CTCACTGAAGCGGACATCATC 58.800 52.381 0.00 0.00 0.00 2.92
601 602 1.134580 CCTCACTGAAGCGGACATCAT 60.135 52.381 0.00 0.00 0.00 2.45
617 618 3.760035 GCTTCGACGAGCCCCTCA 61.760 66.667 0.00 0.00 36.66 3.86
635 636 2.167861 GTCGACGCCCTGATCAAGC 61.168 63.158 0.00 7.22 0.00 4.01
651 652 3.817647 ACAAGATGACCAAGAAAGCTGTC 59.182 43.478 0.00 0.00 0.00 3.51
655 656 3.438434 GGAGACAAGATGACCAAGAAAGC 59.562 47.826 0.00 0.00 0.00 3.51
670 671 3.706373 GCTCGGGCCAGGAGACAA 61.706 66.667 23.11 0.00 33.27 3.18
689 690 2.244117 GATCGTCAAGGAGCTGGGCA 62.244 60.000 0.00 0.00 0.00 5.36
693 694 0.738975 TACGGATCGTCAAGGAGCTG 59.261 55.000 0.00 0.00 41.54 4.24
726 727 4.838152 CACCTGGGATCGGTGGCG 62.838 72.222 9.71 0.00 46.38 5.69
744 745 2.747855 CGCCAGGCCAAGAACTCC 60.748 66.667 5.01 0.00 0.00 3.85
746 747 2.348998 CTCGCCAGGCCAAGAACT 59.651 61.111 5.01 0.00 0.00 3.01
747 748 3.435186 GCTCGCCAGGCCAAGAAC 61.435 66.667 5.01 0.00 0.00 3.01
762 763 2.356313 CCAACACGTCAGAGCGCT 60.356 61.111 11.27 11.27 34.88 5.92
765 766 2.939022 GTGCCAACACGTCAGAGC 59.061 61.111 0.00 0.00 36.98 4.09
775 776 2.594592 AGCAACCTCCGTGCCAAC 60.595 61.111 0.00 0.00 43.27 3.77
776 777 2.281484 GAGCAACCTCCGTGCCAA 60.281 61.111 0.00 0.00 43.27 4.52
783 784 0.460987 CACGATCCAGAGCAACCTCC 60.461 60.000 0.00 0.00 38.96 4.30
784 785 0.460987 CCACGATCCAGAGCAACCTC 60.461 60.000 0.00 0.00 38.42 3.85
788 789 2.125552 CGCCACGATCCAGAGCAA 60.126 61.111 0.00 0.00 0.00 3.91
789 790 4.147449 CCGCCACGATCCAGAGCA 62.147 66.667 0.00 0.00 0.00 4.26
799 800 2.028190 CCTATCAGAGCCGCCACG 59.972 66.667 0.00 0.00 0.00 4.94
800 801 2.280457 GCCTATCAGAGCCGCCAC 60.280 66.667 0.00 0.00 0.00 5.01
804 805 3.996124 CCCCGCCTATCAGAGCCG 61.996 72.222 0.00 0.00 0.00 5.52
807 808 1.457643 TCCACCCCGCCTATCAGAG 60.458 63.158 0.00 0.00 0.00 3.35
808 809 1.457643 CTCCACCCCGCCTATCAGA 60.458 63.158 0.00 0.00 0.00 3.27
831 832 3.741476 CCTCCGTTGCTTGCAGCC 61.741 66.667 4.00 0.00 41.51 4.85
834 835 2.192861 CCAACCTCCGTTGCTTGCA 61.193 57.895 0.00 0.00 46.76 4.08
837 838 1.597027 CGTCCAACCTCCGTTGCTT 60.597 57.895 0.00 0.00 46.76 3.91
842 843 1.835712 AAGGACGTCCAACCTCCGT 60.836 57.895 35.00 10.24 38.89 4.69
843 844 1.374252 CAAGGACGTCCAACCTCCG 60.374 63.158 35.00 11.75 38.89 4.63
846 847 1.344763 CTCTTCAAGGACGTCCAACCT 59.655 52.381 35.00 13.07 38.89 3.50
883 884 3.989698 ATTCAGGACGTCGGCGCTG 62.990 63.158 10.50 10.86 42.83 5.18
884 885 3.701604 GATTCAGGACGTCGGCGCT 62.702 63.158 10.50 0.00 42.83 5.92
885 886 3.255379 GATTCAGGACGTCGGCGC 61.255 66.667 10.50 0.00 42.83 6.53
886 887 1.586564 GAGATTCAGGACGTCGGCG 60.587 63.158 8.42 8.42 44.93 6.46
887 888 1.227002 GGAGATTCAGGACGTCGGC 60.227 63.158 9.92 0.00 0.00 5.54
888 889 0.101399 CTGGAGATTCAGGACGTCGG 59.899 60.000 9.92 4.39 0.00 4.79
889 890 1.064803 CTCTGGAGATTCAGGACGTCG 59.935 57.143 9.92 0.00 35.58 5.12
890 891 2.096248 ACTCTGGAGATTCAGGACGTC 58.904 52.381 7.13 7.13 35.58 4.34
891 892 1.821753 CACTCTGGAGATTCAGGACGT 59.178 52.381 4.49 0.00 35.58 4.34
892 893 1.470632 GCACTCTGGAGATTCAGGACG 60.471 57.143 4.49 0.00 35.58 4.79
893 894 1.470632 CGCACTCTGGAGATTCAGGAC 60.471 57.143 4.49 0.00 35.58 3.85
894 895 0.820226 CGCACTCTGGAGATTCAGGA 59.180 55.000 4.49 0.00 35.58 3.86
895 896 0.534412 ACGCACTCTGGAGATTCAGG 59.466 55.000 4.49 0.00 35.58 3.86
896 897 2.480416 GGTACGCACTCTGGAGATTCAG 60.480 54.545 4.49 0.00 36.17 3.02
897 898 1.476891 GGTACGCACTCTGGAGATTCA 59.523 52.381 4.49 0.00 0.00 2.57
898 899 1.751924 AGGTACGCACTCTGGAGATTC 59.248 52.381 4.49 0.00 0.00 2.52
899 900 1.478510 CAGGTACGCACTCTGGAGATT 59.521 52.381 4.49 0.00 0.00 2.40
900 901 1.107114 CAGGTACGCACTCTGGAGAT 58.893 55.000 4.49 0.00 0.00 2.75
901 902 1.595993 GCAGGTACGCACTCTGGAGA 61.596 60.000 4.49 0.00 0.00 3.71
902 903 1.153745 GCAGGTACGCACTCTGGAG 60.154 63.158 6.45 0.00 0.00 3.86
903 904 1.606601 AGCAGGTACGCACTCTGGA 60.607 57.895 6.45 0.00 0.00 3.86
904 905 1.446792 CAGCAGGTACGCACTCTGG 60.447 63.158 6.45 0.00 0.00 3.86
905 906 2.097038 GCAGCAGGTACGCACTCTG 61.097 63.158 0.00 1.22 0.00 3.35
906 907 2.262915 GCAGCAGGTACGCACTCT 59.737 61.111 0.00 0.00 0.00 3.24
907 908 3.181967 CGCAGCAGGTACGCACTC 61.182 66.667 0.00 0.00 0.00 3.51
908 909 2.149803 TAACGCAGCAGGTACGCACT 62.150 55.000 0.00 0.00 0.00 4.40
909 910 1.735198 TAACGCAGCAGGTACGCAC 60.735 57.895 0.00 0.00 0.00 5.34
910 911 1.735198 GTAACGCAGCAGGTACGCA 60.735 57.895 0.00 0.00 0.00 5.24
911 912 2.450345 GGTAACGCAGCAGGTACGC 61.450 63.158 0.00 0.00 35.24 4.42
912 913 3.776656 GGTAACGCAGCAGGTACG 58.223 61.111 0.00 0.00 35.24 3.67
964 965 4.947147 TCAACTGCCACACCCCGC 62.947 66.667 0.00 0.00 0.00 6.13
965 966 2.203280 TTCAACTGCCACACCCCG 60.203 61.111 0.00 0.00 0.00 5.73
966 967 1.152756 AGTTCAACTGCCACACCCC 60.153 57.895 0.00 0.00 0.00 4.95
967 968 1.455383 CCAGTTCAACTGCCACACCC 61.455 60.000 12.49 0.00 44.63 4.61
968 969 2.032981 CCAGTTCAACTGCCACACC 58.967 57.895 12.49 0.00 44.63 4.16
969 970 1.360192 GCCAGTTCAACTGCCACAC 59.640 57.895 12.49 0.00 44.63 3.82
970 971 1.827789 GGCCAGTTCAACTGCCACA 60.828 57.895 20.09 0.00 44.63 4.17
971 972 1.529244 AGGCCAGTTCAACTGCCAC 60.529 57.895 24.34 12.74 44.63 5.01
972 973 1.529010 CAGGCCAGTTCAACTGCCA 60.529 57.895 24.34 0.00 44.63 4.92
973 974 2.270986 CCAGGCCAGTTCAACTGCC 61.271 63.158 12.49 15.99 44.63 4.85
974 975 2.270986 CCCAGGCCAGTTCAACTGC 61.271 63.158 12.49 7.65 44.63 4.40
975 976 2.270986 GCCCAGGCCAGTTCAACTG 61.271 63.158 10.91 10.91 45.53 3.16
976 977 2.116125 GCCCAGGCCAGTTCAACT 59.884 61.111 5.01 0.00 34.56 3.16
977 978 2.116125 AGCCCAGGCCAGTTCAAC 59.884 61.111 5.01 0.00 43.17 3.18
978 979 2.115910 CAGCCCAGGCCAGTTCAA 59.884 61.111 5.01 0.00 43.17 2.69
979 980 3.970410 CCAGCCCAGGCCAGTTCA 61.970 66.667 5.01 0.00 43.17 3.18
980 981 3.210012 TTCCAGCCCAGGCCAGTTC 62.210 63.158 5.01 0.00 43.17 3.01
981 982 3.185203 TTCCAGCCCAGGCCAGTT 61.185 61.111 5.01 0.00 43.17 3.16
982 983 3.655211 CTTCCAGCCCAGGCCAGT 61.655 66.667 5.01 0.00 43.17 4.00
983 984 2.687610 ATCTTCCAGCCCAGGCCAG 61.688 63.158 5.01 0.00 43.17 4.85
984 985 2.614969 ATCTTCCAGCCCAGGCCA 60.615 61.111 5.01 0.00 43.17 5.36
985 986 2.123982 CATCTTCCAGCCCAGGCC 60.124 66.667 4.70 0.00 43.17 5.19
986 987 2.123982 CCATCTTCCAGCCCAGGC 60.124 66.667 0.00 0.00 42.33 4.85
987 988 2.599597 CCCATCTTCCAGCCCAGG 59.400 66.667 0.00 0.00 0.00 4.45
988 989 2.123982 GCCCATCTTCCAGCCCAG 60.124 66.667 0.00 0.00 0.00 4.45
989 990 3.743017 GGCCCATCTTCCAGCCCA 61.743 66.667 0.00 0.00 39.60 5.36
990 991 3.728292 CTGGCCCATCTTCCAGCCC 62.728 68.421 0.00 0.00 45.14 5.19
991 992 2.123982 CTGGCCCATCTTCCAGCC 60.124 66.667 0.00 0.00 42.79 4.85
994 995 2.940467 TGGCTGGCCCATCTTCCA 60.940 61.111 9.28 0.00 39.18 3.53
995 996 2.123982 CTGGCTGGCCCATCTTCC 60.124 66.667 9.28 0.00 44.33 3.46
996 997 1.153005 CTCTGGCTGGCCCATCTTC 60.153 63.158 9.28 0.00 44.33 2.87
997 998 1.504275 AACTCTGGCTGGCCCATCTT 61.504 55.000 9.28 0.00 44.33 2.40
998 999 1.927527 AACTCTGGCTGGCCCATCT 60.928 57.895 9.28 0.00 44.33 2.90
999 1000 1.751927 CAACTCTGGCTGGCCCATC 60.752 63.158 9.28 0.00 44.33 3.51
1000 1001 2.357836 CAACTCTGGCTGGCCCAT 59.642 61.111 9.28 0.00 44.33 4.00
1001 1002 3.970410 CCAACTCTGGCTGGCCCA 61.970 66.667 9.28 0.00 42.79 5.36
1009 1010 1.118838 TGTTTTTGGGCCAACTCTGG 58.881 50.000 20.79 0.00 46.65 3.86
1010 1011 2.364970 TGATGTTTTTGGGCCAACTCTG 59.635 45.455 20.79 0.00 0.00 3.35
1011 1012 2.629617 CTGATGTTTTTGGGCCAACTCT 59.370 45.455 20.79 1.83 0.00 3.24
1012 1013 2.867647 GCTGATGTTTTTGGGCCAACTC 60.868 50.000 20.79 12.57 0.00 3.01
1013 1014 1.070601 GCTGATGTTTTTGGGCCAACT 59.929 47.619 20.79 1.03 0.00 3.16
1014 1015 1.511850 GCTGATGTTTTTGGGCCAAC 58.488 50.000 20.79 9.45 0.00 3.77
1015 1016 0.396060 GGCTGATGTTTTTGGGCCAA 59.604 50.000 16.66 16.66 39.38 4.52
1016 1017 1.814772 CGGCTGATGTTTTTGGGCCA 61.815 55.000 0.00 0.00 39.53 5.36
1017 1018 1.079888 CGGCTGATGTTTTTGGGCC 60.080 57.895 0.00 0.00 36.60 5.80
1018 1019 1.079888 CCGGCTGATGTTTTTGGGC 60.080 57.895 0.00 0.00 0.00 5.36
1019 1020 1.079888 GCCGGCTGATGTTTTTGGG 60.080 57.895 22.15 0.00 0.00 4.12
1020 1021 1.079888 GGCCGGCTGATGTTTTTGG 60.080 57.895 28.56 0.00 0.00 3.28
1021 1022 1.079888 GGGCCGGCTGATGTTTTTG 60.080 57.895 28.56 0.00 0.00 2.44
1022 1023 1.532794 TGGGCCGGCTGATGTTTTT 60.533 52.632 28.56 0.00 0.00 1.94
1023 1024 1.978617 CTGGGCCGGCTGATGTTTT 60.979 57.895 28.56 0.00 0.00 2.43
1024 1025 2.361610 CTGGGCCGGCTGATGTTT 60.362 61.111 28.56 0.00 0.00 2.83
1025 1026 3.210012 AACTGGGCCGGCTGATGTT 62.210 57.895 28.56 21.47 0.00 2.71
1026 1027 3.650950 AACTGGGCCGGCTGATGT 61.651 61.111 28.56 16.91 0.00 3.06
1027 1028 3.136123 CAACTGGGCCGGCTGATG 61.136 66.667 28.56 17.00 0.00 3.07
1041 1042 0.319405 AAGATGCAAGCCAAGGCAAC 59.681 50.000 14.40 2.52 44.20 4.17
1042 1043 0.604578 GAAGATGCAAGCCAAGGCAA 59.395 50.000 14.40 0.00 44.20 4.52
1043 1044 1.588824 CGAAGATGCAAGCCAAGGCA 61.589 55.000 14.40 0.00 45.23 4.75
1044 1045 1.138247 CGAAGATGCAAGCCAAGGC 59.862 57.895 2.02 2.02 42.33 4.35
1045 1046 0.731417 CTCGAAGATGCAAGCCAAGG 59.269 55.000 0.00 0.00 33.89 3.61
1046 1047 1.730501 TCTCGAAGATGCAAGCCAAG 58.269 50.000 0.00 0.00 33.89 3.61
1047 1048 1.806542 GTTCTCGAAGATGCAAGCCAA 59.193 47.619 0.00 0.00 33.89 4.52
1048 1049 1.002430 AGTTCTCGAAGATGCAAGCCA 59.998 47.619 0.00 0.00 33.89 4.75
1049 1050 1.396301 CAGTTCTCGAAGATGCAAGCC 59.604 52.381 0.00 0.00 33.89 4.35
1050 1051 1.396301 CCAGTTCTCGAAGATGCAAGC 59.604 52.381 0.00 0.00 33.89 4.01
1051 1052 2.928757 CTCCAGTTCTCGAAGATGCAAG 59.071 50.000 0.00 0.00 33.89 4.01
1052 1053 2.354103 CCTCCAGTTCTCGAAGATGCAA 60.354 50.000 0.00 0.00 33.89 4.08
1053 1054 1.205655 CCTCCAGTTCTCGAAGATGCA 59.794 52.381 0.00 0.00 33.89 3.96
1054 1055 1.472376 CCCTCCAGTTCTCGAAGATGC 60.472 57.143 0.00 0.00 33.89 3.91
1055 1056 1.137872 CCCCTCCAGTTCTCGAAGATG 59.862 57.143 0.00 0.00 33.89 2.90
1056 1057 1.490574 CCCCTCCAGTTCTCGAAGAT 58.509 55.000 0.00 0.00 33.89 2.40
1057 1058 0.614979 CCCCCTCCAGTTCTCGAAGA 60.615 60.000 0.00 0.00 0.00 2.87
1058 1059 1.901085 CCCCCTCCAGTTCTCGAAG 59.099 63.158 0.00 0.00 0.00 3.79
1059 1060 2.291043 GCCCCCTCCAGTTCTCGAA 61.291 63.158 0.00 0.00 0.00 3.71
1060 1061 2.683933 GCCCCCTCCAGTTCTCGA 60.684 66.667 0.00 0.00 0.00 4.04
1061 1062 2.685380 AGCCCCCTCCAGTTCTCG 60.685 66.667 0.00 0.00 0.00 4.04
1062 1063 2.674220 CCAGCCCCCTCCAGTTCTC 61.674 68.421 0.00 0.00 0.00 2.87
1063 1064 2.612115 CCAGCCCCCTCCAGTTCT 60.612 66.667 0.00 0.00 0.00 3.01
1064 1065 2.610859 TCCAGCCCCCTCCAGTTC 60.611 66.667 0.00 0.00 0.00 3.01
1065 1066 2.612115 CTCCAGCCCCCTCCAGTT 60.612 66.667 0.00 0.00 0.00 3.16
1066 1067 3.615811 TCTCCAGCCCCCTCCAGT 61.616 66.667 0.00 0.00 0.00 4.00
1067 1068 3.086600 GTCTCCAGCCCCCTCCAG 61.087 72.222 0.00 0.00 0.00 3.86
1068 1069 4.741239 GGTCTCCAGCCCCCTCCA 62.741 72.222 0.00 0.00 0.00 3.86
1069 1070 4.741239 TGGTCTCCAGCCCCCTCC 62.741 72.222 0.00 0.00 0.00 4.30
1070 1071 3.086600 CTGGTCTCCAGCCCCCTC 61.087 72.222 2.77 0.00 45.13 4.30
1078 1079 2.117423 TGGACGAGCTGGTCTCCA 59.883 61.111 25.43 15.70 38.62 3.86
1079 1080 2.574399 GTGGACGAGCTGGTCTCC 59.426 66.667 25.43 13.35 38.62 3.71
1080 1081 2.574399 GGTGGACGAGCTGGTCTC 59.426 66.667 25.43 18.45 37.12 3.36
1094 1095 4.767255 GAGCTGGAGGCCACGGTG 62.767 72.222 5.01 0.00 43.05 4.94
1096 1097 4.463879 CTGAGCTGGAGGCCACGG 62.464 72.222 5.01 3.25 43.05 4.94
1098 1099 4.792804 GGCTGAGCTGGAGGCCAC 62.793 72.222 5.01 0.00 43.59 5.01
1103 1104 4.172512 ATGGCGGCTGAGCTGGAG 62.173 66.667 16.04 0.47 35.15 3.86
1104 1105 4.478371 CATGGCGGCTGAGCTGGA 62.478 66.667 16.04 0.00 35.15 3.86
1109 1110 3.200593 GACTGCATGGCGGCTGAG 61.201 66.667 11.43 3.08 38.71 3.35
1110 1111 3.549900 TTGACTGCATGGCGGCTGA 62.550 57.895 11.43 0.00 38.71 4.26
1111 1112 3.057548 TTGACTGCATGGCGGCTG 61.058 61.111 11.43 7.30 38.71 4.85
1112 1113 3.058160 GTTGACTGCATGGCGGCT 61.058 61.111 11.43 0.00 38.71 5.52
1113 1114 4.465512 CGTTGACTGCATGGCGGC 62.466 66.667 0.00 0.00 38.71 6.53
1114 1115 4.465512 GCGTTGACTGCATGGCGG 62.466 66.667 0.00 0.00 41.29 6.13
1115 1116 4.799473 CGCGTTGACTGCATGGCG 62.799 66.667 0.00 0.00 38.86 5.69
1116 1117 4.465512 CCGCGTTGACTGCATGGC 62.466 66.667 4.92 0.00 0.00 4.40
1117 1118 3.027170 GACCGCGTTGACTGCATGG 62.027 63.158 4.92 0.00 0.00 3.66
1118 1119 2.476051 GACCGCGTTGACTGCATG 59.524 61.111 4.92 0.00 0.00 4.06
1119 1120 3.112075 CGACCGCGTTGACTGCAT 61.112 61.111 4.92 0.00 0.00 3.96
1122 1123 3.112075 ATGCGACCGCGTTGACTG 61.112 61.111 4.92 0.00 45.51 3.51
1123 1124 3.112075 CATGCGACCGCGTTGACT 61.112 61.111 4.92 0.00 45.51 3.41
1124 1125 4.147322 CCATGCGACCGCGTTGAC 62.147 66.667 4.92 0.00 45.51 3.18
1131 1132 3.055719 AACCAAGCCATGCGACCG 61.056 61.111 0.00 0.00 0.00 4.79
1132 1133 2.568090 CAACCAAGCCATGCGACC 59.432 61.111 0.00 0.00 0.00 4.79
1133 1134 1.971167 TCCAACCAAGCCATGCGAC 60.971 57.895 0.00 0.00 0.00 5.19
1134 1135 1.971167 GTCCAACCAAGCCATGCGA 60.971 57.895 0.00 0.00 0.00 5.10
1135 1136 2.568090 GTCCAACCAAGCCATGCG 59.432 61.111 0.00 0.00 0.00 4.73
1136 1137 2.568090 CGTCCAACCAAGCCATGC 59.432 61.111 0.00 0.00 0.00 4.06
1137 1138 1.526575 AAGCGTCCAACCAAGCCATG 61.527 55.000 0.00 0.00 0.00 3.66
1138 1139 1.228552 AAGCGTCCAACCAAGCCAT 60.229 52.632 0.00 0.00 0.00 4.40
1139 1140 2.192861 CAAGCGTCCAACCAAGCCA 61.193 57.895 0.00 0.00 0.00 4.75
1140 1141 2.644992 CAAGCGTCCAACCAAGCC 59.355 61.111 0.00 0.00 0.00 4.35
1141 1142 2.644992 CCAAGCGTCCAACCAAGC 59.355 61.111 0.00 0.00 0.00 4.01
1142 1143 1.526575 ATGCCAAGCGTCCAACCAAG 61.527 55.000 0.00 0.00 0.00 3.61
1143 1144 1.112315 AATGCCAAGCGTCCAACCAA 61.112 50.000 0.00 0.00 0.00 3.67
1144 1145 1.530419 AATGCCAAGCGTCCAACCA 60.530 52.632 0.00 0.00 0.00 3.67
1145 1146 1.080569 CAATGCCAAGCGTCCAACC 60.081 57.895 0.00 0.00 0.00 3.77
1146 1147 1.080569 CCAATGCCAAGCGTCCAAC 60.081 57.895 0.00 0.00 0.00 3.77
1147 1148 2.929903 GCCAATGCCAAGCGTCCAA 61.930 57.895 0.00 0.00 0.00 3.53
1148 1149 3.372730 GCCAATGCCAAGCGTCCA 61.373 61.111 0.00 0.00 0.00 4.02
1149 1150 4.481112 CGCCAATGCCAAGCGTCC 62.481 66.667 0.00 0.00 44.65 4.79
1153 1154 0.038343 TTTCTTCGCCAATGCCAAGC 60.038 50.000 0.00 0.00 35.88 4.01
1154 1155 1.986698 CTTTCTTCGCCAATGCCAAG 58.013 50.000 0.00 0.00 37.08 3.61
1155 1156 0.038343 GCTTTCTTCGCCAATGCCAA 60.038 50.000 0.00 0.00 0.00 4.52
1156 1157 1.586028 GCTTTCTTCGCCAATGCCA 59.414 52.632 0.00 0.00 0.00 4.92
1157 1158 1.514873 CGCTTTCTTCGCCAATGCC 60.515 57.895 0.00 0.00 0.00 4.40
1158 1159 0.794605 GACGCTTTCTTCGCCAATGC 60.795 55.000 0.00 0.00 0.00 3.56
1159 1160 0.179189 GGACGCTTTCTTCGCCAATG 60.179 55.000 0.00 0.00 0.00 2.82
1160 1161 0.605319 TGGACGCTTTCTTCGCCAAT 60.605 50.000 0.00 0.00 32.97 3.16
1161 1162 1.227704 TGGACGCTTTCTTCGCCAA 60.228 52.632 0.00 0.00 32.97 4.52
1162 1163 1.959226 GTGGACGCTTTCTTCGCCA 60.959 57.895 0.00 0.00 33.29 5.69
1163 1164 2.861006 GTGGACGCTTTCTTCGCC 59.139 61.111 0.00 0.00 0.00 5.54
1164 1165 2.470286 CGTGGACGCTTTCTTCGC 59.530 61.111 0.00 0.00 0.00 4.70
1165 1166 2.380410 CCCGTGGACGCTTTCTTCG 61.380 63.158 0.00 0.00 38.18 3.79
1166 1167 2.033194 CCCCGTGGACGCTTTCTTC 61.033 63.158 0.00 0.00 38.18 2.87
1167 1168 2.032071 CCCCGTGGACGCTTTCTT 59.968 61.111 0.00 0.00 38.18 2.52
1168 1169 3.236003 GACCCCGTGGACGCTTTCT 62.236 63.158 0.00 0.00 38.18 2.52
1169 1170 2.741211 GACCCCGTGGACGCTTTC 60.741 66.667 0.00 0.00 38.18 2.62
1170 1171 4.675029 CGACCCCGTGGACGCTTT 62.675 66.667 0.00 0.00 42.48 3.51
1208 1209 4.748144 GACCAGCAAGGCCCCAGG 62.748 72.222 0.00 0.00 43.14 4.45
1231 1232 3.672295 GAAGCCGCTCCTGTCCCTG 62.672 68.421 0.00 0.00 0.00 4.45
1232 1233 3.394836 GAAGCCGCTCCTGTCCCT 61.395 66.667 0.00 0.00 0.00 4.20
1233 1234 4.475135 GGAAGCCGCTCCTGTCCC 62.475 72.222 0.00 0.00 32.21 4.46
1234 1235 2.960688 AAGGAAGCCGCTCCTGTCC 61.961 63.158 10.91 6.46 45.59 4.02
1235 1236 1.743252 CAAGGAAGCCGCTCCTGTC 60.743 63.158 10.91 0.00 45.59 3.51
1236 1237 2.348998 CAAGGAAGCCGCTCCTGT 59.651 61.111 10.91 1.90 45.59 4.00
1237 1238 3.130160 GCAAGGAAGCCGCTCCTG 61.130 66.667 10.91 7.57 45.59 3.86
1239 1240 3.130160 CAGCAAGGAAGCCGCTCC 61.130 66.667 0.00 0.00 32.48 4.70
1240 1241 3.130160 CCAGCAAGGAAGCCGCTC 61.130 66.667 0.00 0.00 41.22 5.03
1241 1242 3.640407 TCCAGCAAGGAAGCCGCT 61.640 61.111 0.00 0.00 45.65 5.52
1248 1249 2.935481 CCCCCACTCCAGCAAGGA 60.935 66.667 0.00 0.00 46.75 3.36
1249 1250 4.748144 GCCCCCACTCCAGCAAGG 62.748 72.222 0.00 0.00 39.47 3.61
1250 1251 3.215587 AAGCCCCCACTCCAGCAAG 62.216 63.158 0.00 0.00 0.00 4.01
1251 1252 3.185203 AAGCCCCCACTCCAGCAA 61.185 61.111 0.00 0.00 0.00 3.91
1252 1253 3.650950 GAAGCCCCCACTCCAGCA 61.651 66.667 0.00 0.00 0.00 4.41
1253 1254 3.334054 AGAAGCCCCCACTCCAGC 61.334 66.667 0.00 0.00 0.00 4.85
1254 1255 2.673523 CAGAAGCCCCCACTCCAG 59.326 66.667 0.00 0.00 0.00 3.86
1255 1256 3.650950 GCAGAAGCCCCCACTCCA 61.651 66.667 0.00 0.00 33.58 3.86
1256 1257 2.900671 GATGCAGAAGCCCCCACTCC 62.901 65.000 0.00 0.00 41.13 3.85
1257 1258 1.452833 GATGCAGAAGCCCCCACTC 60.453 63.158 0.00 0.00 41.13 3.51
1258 1259 1.927527 AGATGCAGAAGCCCCCACT 60.928 57.895 0.00 0.00 41.13 4.00
1259 1260 1.751927 CAGATGCAGAAGCCCCCAC 60.752 63.158 0.00 0.00 41.13 4.61
1260 1261 2.679092 CAGATGCAGAAGCCCCCA 59.321 61.111 0.00 0.00 41.13 4.96
1261 1262 2.832201 GCAGATGCAGAAGCCCCC 60.832 66.667 0.00 0.00 41.13 5.40
1262 1263 2.119655 CAGCAGATGCAGAAGCCCC 61.120 63.158 7.68 0.00 45.16 5.80
1263 1264 3.510846 CAGCAGATGCAGAAGCCC 58.489 61.111 7.68 0.00 45.16 5.19
1272 1273 0.759959 AGGAGAGATGGCAGCAGATG 59.240 55.000 5.19 0.00 0.00 2.90
1273 1274 0.759959 CAGGAGAGATGGCAGCAGAT 59.240 55.000 5.19 0.00 0.00 2.90
1274 1275 0.616964 ACAGGAGAGATGGCAGCAGA 60.617 55.000 5.19 0.00 0.00 4.26
1275 1276 0.462225 CACAGGAGAGATGGCAGCAG 60.462 60.000 5.19 0.00 0.00 4.24
1276 1277 1.600638 CACAGGAGAGATGGCAGCA 59.399 57.895 5.19 0.00 0.00 4.41
1277 1278 1.153208 CCACAGGAGAGATGGCAGC 60.153 63.158 0.00 0.00 0.00 5.25
1281 1282 2.202987 GCGCCACAGGAGAGATGG 60.203 66.667 0.00 0.00 36.51 3.51
1282 1283 2.202987 GGCGCCACAGGAGAGATG 60.203 66.667 24.80 0.00 0.00 2.90
1283 1284 1.965754 GAAGGCGCCACAGGAGAGAT 61.966 60.000 31.54 0.00 0.00 2.75
1284 1285 2.604686 AAGGCGCCACAGGAGAGA 60.605 61.111 31.54 0.00 0.00 3.10
1285 1286 2.125350 GAAGGCGCCACAGGAGAG 60.125 66.667 31.54 0.00 0.00 3.20
1286 1287 3.706373 GGAAGGCGCCACAGGAGA 61.706 66.667 31.54 0.00 0.00 3.71
1287 1288 3.965539 CTGGAAGGCGCCACAGGAG 62.966 68.421 31.54 13.54 33.52 3.69
1288 1289 4.020617 CTGGAAGGCGCCACAGGA 62.021 66.667 31.54 7.14 33.52 3.86
1317 1318 2.103042 CGGAAGAAAGGCAGCGGAG 61.103 63.158 0.00 0.00 0.00 4.63
1318 1319 2.047274 CGGAAGAAAGGCAGCGGA 60.047 61.111 0.00 0.00 0.00 5.54
1319 1320 3.127533 CCGGAAGAAAGGCAGCGG 61.128 66.667 0.00 0.00 0.00 5.52
1320 1321 3.127533 CCCGGAAGAAAGGCAGCG 61.128 66.667 0.73 0.00 0.00 5.18
1321 1322 2.751837 CCCCGGAAGAAAGGCAGC 60.752 66.667 0.73 0.00 0.00 5.25
1322 1323 2.751837 GCCCCGGAAGAAAGGCAG 60.752 66.667 0.73 0.00 45.07 4.85
1324 1325 2.206182 TAAGGCCCCGGAAGAAAGGC 62.206 60.000 0.73 5.65 44.99 4.35
1325 1326 0.551396 ATAAGGCCCCGGAAGAAAGG 59.449 55.000 0.73 0.00 0.00 3.11
1326 1327 2.092375 AGAATAAGGCCCCGGAAGAAAG 60.092 50.000 0.73 0.00 0.00 2.62
1327 1328 1.920351 AGAATAAGGCCCCGGAAGAAA 59.080 47.619 0.73 0.00 0.00 2.52
1328 1329 1.591768 AGAATAAGGCCCCGGAAGAA 58.408 50.000 0.73 0.00 0.00 2.52
1329 1330 1.211949 CAAGAATAAGGCCCCGGAAGA 59.788 52.381 0.73 0.00 0.00 2.87
1330 1331 1.680338 CAAGAATAAGGCCCCGGAAG 58.320 55.000 0.73 0.00 0.00 3.46
1331 1332 0.395173 GCAAGAATAAGGCCCCGGAA 60.395 55.000 0.73 0.00 0.00 4.30
1332 1333 1.226262 GCAAGAATAAGGCCCCGGA 59.774 57.895 0.73 0.00 0.00 5.14
1333 1334 1.828224 GGCAAGAATAAGGCCCCGG 60.828 63.158 0.00 0.00 41.90 5.73
1334 1335 3.841870 GGCAAGAATAAGGCCCCG 58.158 61.111 0.00 0.00 41.90 5.73
1337 1338 1.134367 GAAACGGGCAAGAATAAGGCC 59.866 52.381 0.00 0.00 46.99 5.19
1338 1339 1.134367 GGAAACGGGCAAGAATAAGGC 59.866 52.381 0.00 0.00 0.00 4.35
1339 1340 2.723273 AGGAAACGGGCAAGAATAAGG 58.277 47.619 0.00 0.00 0.00 2.69
1340 1341 3.119495 CCAAGGAAACGGGCAAGAATAAG 60.119 47.826 0.00 0.00 0.00 1.73
1341 1342 2.823154 CCAAGGAAACGGGCAAGAATAA 59.177 45.455 0.00 0.00 0.00 1.40
1342 1343 2.442413 CCAAGGAAACGGGCAAGAATA 58.558 47.619 0.00 0.00 0.00 1.75
1343 1344 1.256812 CCAAGGAAACGGGCAAGAAT 58.743 50.000 0.00 0.00 0.00 2.40
1344 1345 2.727103 CCAAGGAAACGGGCAAGAA 58.273 52.632 0.00 0.00 0.00 2.52
1345 1346 4.492604 CCAAGGAAACGGGCAAGA 57.507 55.556 0.00 0.00 0.00 3.02
1350 1351 1.675641 CTCCAGCCAAGGAAACGGG 60.676 63.158 0.00 0.00 37.20 5.28
1351 1352 2.335712 GCTCCAGCCAAGGAAACGG 61.336 63.158 0.00 0.00 37.20 4.44
1352 1353 0.962356 ATGCTCCAGCCAAGGAAACG 60.962 55.000 0.00 0.00 41.18 3.60
1353 1354 0.529378 CATGCTCCAGCCAAGGAAAC 59.471 55.000 0.00 0.00 41.18 2.78
1354 1355 0.612732 CCATGCTCCAGCCAAGGAAA 60.613 55.000 0.00 0.00 41.18 3.13
1355 1356 1.000521 CCATGCTCCAGCCAAGGAA 60.001 57.895 0.00 0.00 41.18 3.36
1356 1357 2.679092 CCATGCTCCAGCCAAGGA 59.321 61.111 0.00 0.00 41.18 3.36
1357 1358 3.145551 GCCATGCTCCAGCCAAGG 61.146 66.667 0.00 0.00 41.18 3.61
1358 1359 2.361992 TGCCATGCTCCAGCCAAG 60.362 61.111 0.00 0.00 41.18 3.61
1359 1360 2.677524 GTGCCATGCTCCAGCCAA 60.678 61.111 0.00 0.00 41.18 4.52
1363 1364 3.925630 AACCCGTGCCATGCTCCAG 62.926 63.158 0.00 0.00 0.00 3.86
1364 1365 3.965258 AACCCGTGCCATGCTCCA 61.965 61.111 0.00 0.00 0.00 3.86
1365 1366 3.443045 CAACCCGTGCCATGCTCC 61.443 66.667 0.00 0.00 0.00 4.70
1386 1387 3.371097 ATACGCTGCTGGGACGTGG 62.371 63.158 14.63 0.00 40.78 4.94
1387 1388 1.878522 GATACGCTGCTGGGACGTG 60.879 63.158 14.63 0.00 40.78 4.49
1388 1389 2.494918 GATACGCTGCTGGGACGT 59.505 61.111 14.63 7.25 43.45 4.34
1389 1390 2.279517 GGATACGCTGCTGGGACG 60.280 66.667 14.63 1.19 0.00 4.79
1390 1391 2.109181 GGGATACGCTGCTGGGAC 59.891 66.667 14.63 5.43 37.60 4.46
1391 1392 2.041922 AGGGATACGCTGCTGGGA 60.042 61.111 14.63 0.00 37.60 4.37
1392 1393 2.423446 GAGGGATACGCTGCTGGG 59.577 66.667 6.09 6.09 37.60 4.45
1393 1394 2.374830 CTGGAGGGATACGCTGCTGG 62.375 65.000 0.00 0.00 35.92 4.85
1394 1395 1.068753 CTGGAGGGATACGCTGCTG 59.931 63.158 0.00 4.81 35.92 4.41
1395 1396 2.136878 CCTGGAGGGATACGCTGCT 61.137 63.158 0.00 0.00 35.92 4.24
1396 1397 2.134287 TCCTGGAGGGATACGCTGC 61.134 63.158 0.00 0.00 39.58 5.25
1397 1398 4.277552 TCCTGGAGGGATACGCTG 57.722 61.111 0.00 0.00 39.58 5.18
1422 1423 2.058595 AAGATGGAGACGGGTCCGG 61.059 63.158 14.25 0.00 44.69 5.14
1423 1424 1.141881 CAAGATGGAGACGGGTCCG 59.858 63.158 7.97 7.97 39.81 4.79
1424 1425 1.265454 ACCAAGATGGAGACGGGTCC 61.265 60.000 2.85 0.00 40.96 4.46
1425 1426 0.175989 GACCAAGATGGAGACGGGTC 59.824 60.000 2.85 0.00 40.96 4.46
1426 1427 1.605058 CGACCAAGATGGAGACGGGT 61.605 60.000 2.85 0.00 40.96 5.28
1427 1428 1.141881 CGACCAAGATGGAGACGGG 59.858 63.158 2.85 0.00 40.96 5.28
1428 1429 1.519455 GCGACCAAGATGGAGACGG 60.519 63.158 2.85 0.00 40.96 4.79
1429 1430 1.874019 CGCGACCAAGATGGAGACG 60.874 63.158 0.00 7.11 40.96 4.18
1430 1431 1.519455 CCGCGACCAAGATGGAGAC 60.519 63.158 8.23 0.00 40.96 3.36
1431 1432 1.680989 TCCGCGACCAAGATGGAGA 60.681 57.895 8.23 0.00 40.96 3.71
1432 1433 1.227089 CTCCGCGACCAAGATGGAG 60.227 63.158 8.23 0.00 40.96 3.86
1433 1434 2.892640 CTCCGCGACCAAGATGGA 59.107 61.111 8.23 0.00 40.96 3.41
1434 1435 2.892425 GCTCCGCGACCAAGATGG 60.892 66.667 8.23 0.00 45.02 3.51
1478 1479 4.767255 CCTGTGGTGAGCTCGGGC 62.767 72.222 9.64 0.00 39.06 6.13
1479 1480 3.314331 ACCTGTGGTGAGCTCGGG 61.314 66.667 9.64 9.79 32.98 5.14
1490 1491 3.362797 CAGCAGCAGCCACCTGTG 61.363 66.667 0.00 0.00 43.56 3.66
1491 1492 4.655647 CCAGCAGCAGCCACCTGT 62.656 66.667 0.00 0.00 43.56 4.00
1525 1526 2.669569 TTGAAGACGGGCAGCAGC 60.670 61.111 0.00 0.00 41.10 5.25
1526 1527 2.328099 GGTTGAAGACGGGCAGCAG 61.328 63.158 0.00 0.00 0.00 4.24
1527 1528 2.281484 GGTTGAAGACGGGCAGCA 60.281 61.111 0.00 0.00 0.00 4.41
1528 1529 1.578206 GAAGGTTGAAGACGGGCAGC 61.578 60.000 0.00 0.00 0.00 5.25
1529 1530 0.250295 TGAAGGTTGAAGACGGGCAG 60.250 55.000 0.00 0.00 0.00 4.85
1530 1531 0.400213 ATGAAGGTTGAAGACGGGCA 59.600 50.000 0.00 0.00 0.00 5.36
1531 1532 0.804989 CATGAAGGTTGAAGACGGGC 59.195 55.000 0.00 0.00 0.00 6.13
1532 1533 1.453155 CCATGAAGGTTGAAGACGGG 58.547 55.000 0.00 0.00 0.00 5.28
1543 1544 1.379044 GGCACCTGGACCATGAAGG 60.379 63.158 0.00 0.00 45.67 3.46
1544 1545 4.326255 GGCACCTGGACCATGAAG 57.674 61.111 0.00 0.00 0.00 3.02
1557 1558 0.394352 AGTGATGAATTCCCGGGCAC 60.394 55.000 18.49 16.39 0.00 5.01
1558 1559 1.134220 GTAGTGATGAATTCCCGGGCA 60.134 52.381 18.49 4.91 0.00 5.36
1559 1560 1.141053 AGTAGTGATGAATTCCCGGGC 59.859 52.381 18.49 1.20 0.00 6.13
1560 1561 3.386726 TGTAGTAGTGATGAATTCCCGGG 59.613 47.826 16.85 16.85 0.00 5.73
1561 1562 4.665833 TGTAGTAGTGATGAATTCCCGG 57.334 45.455 2.27 0.00 0.00 5.73
1562 1563 7.378966 ACATATGTAGTAGTGATGAATTCCCG 58.621 38.462 6.56 0.00 0.00 5.14
1563 1564 9.640963 GTACATATGTAGTAGTGATGAATTCCC 57.359 37.037 15.93 0.00 0.00 3.97
1606 1607 4.730949 AGATCCGTGAAGTAATTCCGAA 57.269 40.909 13.04 0.00 0.00 4.30
1608 1609 4.026804 CGAAAGATCCGTGAAGTAATTCCG 60.027 45.833 0.00 3.92 0.00 4.30
1667 1668 5.147330 TCTCACGATACAACAAAGACCAT 57.853 39.130 0.00 0.00 0.00 3.55
1890 1898 1.760086 CTGCTCACCGGAGAGGGAT 60.760 63.158 27.22 0.00 46.96 3.85
2108 2116 3.758973 TTGTCAAGGGCGACGGCAA 62.759 57.895 23.66 4.58 42.47 4.52
2212 2226 1.182385 TTCCCCAATTCCACAACGCC 61.182 55.000 0.00 0.00 0.00 5.68
2225 2239 3.407967 GTCCATCCGCCTTCCCCA 61.408 66.667 0.00 0.00 0.00 4.96
2228 2242 2.190578 CCTGTCCATCCGCCTTCC 59.809 66.667 0.00 0.00 0.00 3.46
2233 2247 4.864334 CTGCCCCTGTCCATCCGC 62.864 72.222 0.00 0.00 0.00 5.54
2234 2248 3.083349 TCTGCCCCTGTCCATCCG 61.083 66.667 0.00 0.00 0.00 4.18
2236 2250 2.191641 GCTCTGCCCCTGTCCATC 59.808 66.667 0.00 0.00 0.00 3.51
2237 2251 2.207501 CTTGCTCTGCCCCTGTCCAT 62.208 60.000 0.00 0.00 0.00 3.41
2348 2368 1.853250 AAGAAGCCCCGGGGAAAGAG 61.853 60.000 44.86 16.59 37.50 2.85
2370 2390 4.353383 AACCTTTGGTAGAACACTCCTC 57.647 45.455 0.00 0.00 33.12 3.71
2529 2552 2.009774 GGTATCTTGCTCGCACATGTT 58.990 47.619 0.00 0.00 0.00 2.71
2548 2571 3.441572 CACTCTTTTATTGCAGTCCCAGG 59.558 47.826 0.00 0.00 0.00 4.45
2562 2591 3.406764 AGAAGAAGATGCGCACTCTTTT 58.593 40.909 25.44 20.35 33.18 2.27
2572 2601 2.345124 ATGCCCAGAGAAGAAGATGC 57.655 50.000 0.00 0.00 0.00 3.91
2578 2607 0.107993 CTGCGAATGCCCAGAGAAGA 60.108 55.000 0.00 0.00 41.78 2.87
2744 2858 4.280677 TCTCCACCCAGCAGTTTATTTTTG 59.719 41.667 0.00 0.00 0.00 2.44
2820 2949 5.866335 ATAGATACGAGCTTTACTCCGAG 57.134 43.478 0.00 0.00 43.01 4.63
2823 2952 7.040961 AGTCTGAATAGATACGAGCTTTACTCC 60.041 40.741 0.00 0.00 37.41 3.85
2835 2964 7.158021 CCCCTTCAATCAGTCTGAATAGATAC 58.842 42.308 6.64 0.00 34.94 2.24
2843 2972 0.250234 CGCCCCTTCAATCAGTCTGA 59.750 55.000 4.68 4.68 0.00 3.27
2911 3040 7.201617 GCAAAACAGACATAGTAACCCATCTAC 60.202 40.741 0.00 0.00 0.00 2.59
2912 3041 6.821665 GCAAAACAGACATAGTAACCCATCTA 59.178 38.462 0.00 0.00 0.00 1.98
2915 3044 5.570320 AGCAAAACAGACATAGTAACCCAT 58.430 37.500 0.00 0.00 0.00 4.00
2916 3045 4.980573 AGCAAAACAGACATAGTAACCCA 58.019 39.130 0.00 0.00 0.00 4.51
2919 3048 5.389516 CGTGGAGCAAAACAGACATAGTAAC 60.390 44.000 0.00 0.00 0.00 2.50
2960 3089 1.543802 CTGACTCACCAGAGACCAGAC 59.456 57.143 0.00 0.00 44.98 3.51
2961 3090 1.145945 ACTGACTCACCAGAGACCAGA 59.854 52.381 18.53 0.00 44.98 3.86
2962 3091 1.626686 ACTGACTCACCAGAGACCAG 58.373 55.000 13.59 13.59 44.98 4.00
2963 3092 2.971901 TACTGACTCACCAGAGACCA 57.028 50.000 0.00 0.00 44.98 4.02
2964 3093 3.118956 CCAATACTGACTCACCAGAGACC 60.119 52.174 0.00 0.00 44.98 3.85
2965 3094 3.118956 CCCAATACTGACTCACCAGAGAC 60.119 52.174 0.00 0.00 44.98 3.36
2966 3095 3.099905 CCCAATACTGACTCACCAGAGA 58.900 50.000 0.00 0.00 44.98 3.10
2976 3105 2.973694 TTACTCCGCCCAATACTGAC 57.026 50.000 0.00 0.00 0.00 3.51
2989 3118 4.162509 AGGAGGTAGAGTGCAAATTACTCC 59.837 45.833 13.65 13.65 44.35 3.85
3038 3167 7.645340 GCTATGCTTCGAATCATTGTTATTGTT 59.355 33.333 18.66 0.00 0.00 2.83
3039 3168 7.012704 AGCTATGCTTCGAATCATTGTTATTGT 59.987 33.333 18.66 0.00 33.89 2.71
3040 3169 7.358066 AGCTATGCTTCGAATCATTGTTATTG 58.642 34.615 18.66 0.00 33.89 1.90
3041 3170 7.502120 AGCTATGCTTCGAATCATTGTTATT 57.498 32.000 18.66 0.00 33.89 1.40
3151 3310 7.220683 CCTGGAGCGTAATAATGTTCAAATTTG 59.779 37.037 12.15 12.15 0.00 2.32
3184 3343 8.402798 TGCATTCCTAGAAAAAGAACACATTA 57.597 30.769 0.00 0.00 0.00 1.90
3216 3375 6.542370 GGAGCACAAGGAATAGCTTTTACATA 59.458 38.462 1.74 0.00 37.48 2.29
3217 3376 5.358160 GGAGCACAAGGAATAGCTTTTACAT 59.642 40.000 1.74 0.00 37.48 2.29
3267 3426 4.508662 AGTGCAGTAGCTTCAGGATTTAC 58.491 43.478 0.00 0.00 42.74 2.01
3302 3461 4.475051 TTTGAGGTGGCGCTATAAACTA 57.525 40.909 7.64 0.00 0.00 2.24
3303 3462 3.343941 TTTGAGGTGGCGCTATAAACT 57.656 42.857 7.64 0.00 0.00 2.66
3304 3463 3.303132 CGATTTGAGGTGGCGCTATAAAC 60.303 47.826 7.64 0.00 0.00 2.01
3305 3464 2.869801 CGATTTGAGGTGGCGCTATAAA 59.130 45.455 7.64 2.68 0.00 1.40
3307 3466 1.684450 TCGATTTGAGGTGGCGCTATA 59.316 47.619 7.64 0.00 0.00 1.31
3356 3566 5.393866 AGAGCCAAAGAGTATTCCCAAAAA 58.606 37.500 0.00 0.00 0.00 1.94
3357 3567 4.998051 AGAGCCAAAGAGTATTCCCAAAA 58.002 39.130 0.00 0.00 0.00 2.44
3358 3568 4.657814 AGAGCCAAAGAGTATTCCCAAA 57.342 40.909 0.00 0.00 0.00 3.28
3359 3569 5.428457 TGATAGAGCCAAAGAGTATTCCCAA 59.572 40.000 0.00 0.00 0.00 4.12
3360 3570 4.968719 TGATAGAGCCAAAGAGTATTCCCA 59.031 41.667 0.00 0.00 0.00 4.37
3361 3571 5.552870 TGATAGAGCCAAAGAGTATTCCC 57.447 43.478 0.00 0.00 0.00 3.97
3362 3572 5.936956 CCATGATAGAGCCAAAGAGTATTCC 59.063 44.000 0.00 0.00 0.00 3.01
3363 3573 6.529220 ACCATGATAGAGCCAAAGAGTATTC 58.471 40.000 0.00 0.00 0.00 1.75
3364 3574 6.506538 ACCATGATAGAGCCAAAGAGTATT 57.493 37.500 0.00 0.00 0.00 1.89
3365 3575 6.506538 AACCATGATAGAGCCAAAGAGTAT 57.493 37.500 0.00 0.00 0.00 2.12
3366 3576 5.957771 AACCATGATAGAGCCAAAGAGTA 57.042 39.130 0.00 0.00 0.00 2.59
3367 3577 4.851639 AACCATGATAGAGCCAAAGAGT 57.148 40.909 0.00 0.00 0.00 3.24
3368 3578 5.188434 TCAAACCATGATAGAGCCAAAGAG 58.812 41.667 0.00 0.00 31.50 2.85
3369 3579 5.178096 TCAAACCATGATAGAGCCAAAGA 57.822 39.130 0.00 0.00 31.50 2.52
3370 3580 5.649395 TCTTCAAACCATGATAGAGCCAAAG 59.351 40.000 0.00 0.00 38.03 2.77
3371 3581 5.569355 TCTTCAAACCATGATAGAGCCAAA 58.431 37.500 0.00 0.00 38.03 3.28
3372 3582 5.178096 TCTTCAAACCATGATAGAGCCAA 57.822 39.130 0.00 0.00 38.03 4.52
3383 3593 6.239120 CCAACTTGAACTCATCTTCAAACCAT 60.239 38.462 0.00 0.00 39.19 3.55
3442 3657 6.601332 AGTGTTCAAAAGGGAGACATCTAAA 58.399 36.000 0.00 0.00 0.00 1.85
3470 3685 4.082190 TGGAACAATCAACCAAACGAACAA 60.082 37.500 0.00 0.00 31.92 2.83
3506 3721 0.179163 GCACATAAGCTTTGCGGTCC 60.179 55.000 3.20 0.00 0.00 4.46
3507 3722 3.312709 GCACATAAGCTTTGCGGTC 57.687 52.632 3.20 0.00 0.00 4.79
3511 3726 1.464608 TCACTCGCACATAAGCTTTGC 59.535 47.619 3.20 8.03 0.00 3.68
3522 3737 4.909880 GGAAATACAAAACTTCACTCGCAC 59.090 41.667 0.00 0.00 0.00 5.34
3525 3740 6.149474 AGGATGGAAATACAAAACTTCACTCG 59.851 38.462 0.00 0.00 0.00 4.18
3794 4009 3.568007 TCTTGAAAAAGGGGTCATCGTTG 59.432 43.478 0.00 0.00 0.00 4.10
3805 4020 6.455647 GGGGTTATCACTTTCTTGAAAAAGG 58.544 40.000 1.90 0.00 39.96 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.