Multiple sequence alignment - TraesCS3D01G237400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G237400 chr3D 100.000 2249 0 0 1 2249 328398792 328396544 0.000000e+00 4154.0
1 TraesCS3D01G237400 chr3B 91.939 1042 40 16 584 1622 421612087 421613087 0.000000e+00 1419.0
2 TraesCS3D01G237400 chr3B 93.981 216 12 1 333 548 421610482 421610696 2.150000e-85 326.0
3 TraesCS3D01G237400 chr3B 91.875 160 10 2 1 157 415934281 415934440 1.050000e-53 220.0
4 TraesCS3D01G237400 chr3B 100.000 28 0 0 548 575 421611862 421611889 4.000000e-03 52.8
5 TraesCS3D01G237400 chr3A 93.590 624 30 6 661 1284 442901760 442901147 0.000000e+00 922.0
6 TraesCS3D01G237400 chr3A 93.874 506 29 1 4 507 442911023 442910518 0.000000e+00 761.0
7 TraesCS3D01G237400 chr3A 84.591 318 17 14 1321 1614 442901153 442900844 1.020000e-73 287.0
8 TraesCS3D01G237400 chr3A 92.453 159 9 2 4 159 375018217 375018059 8.080000e-55 224.0
9 TraesCS3D01G237400 chr3A 95.455 66 3 0 584 649 442901885 442901820 3.050000e-19 106.0
10 TraesCS3D01G237400 chr3A 97.959 49 1 0 527 575 442910517 442910469 3.980000e-13 86.1
11 TraesCS3D01G237400 chr7B 92.593 162 9 2 1 159 444462435 444462596 1.740000e-56 230.0
12 TraesCS3D01G237400 chr7B 87.692 65 7 1 509 573 203279351 203279414 8.610000e-10 75.0
13 TraesCS3D01G237400 chr6B 93.082 159 7 3 5 159 475701435 475701593 1.740000e-56 230.0
14 TraesCS3D01G237400 chr5B 93.082 159 8 2 4 159 455170822 455170664 1.740000e-56 230.0
15 TraesCS3D01G237400 chr2D 92.547 161 9 2 1 159 341699375 341699534 6.250000e-56 228.0
16 TraesCS3D01G237400 chr5D 91.975 162 10 2 1 159 386861751 386861912 8.080000e-55 224.0
17 TraesCS3D01G237400 chr4D 91.975 162 10 2 1 159 313574238 313574399 8.080000e-55 224.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G237400 chr3D 328396544 328398792 2248 True 4154.000000 4154 100.000000 1 2249 1 chr3D.!!$R1 2248
1 TraesCS3D01G237400 chr3B 421610482 421613087 2605 False 599.266667 1419 95.306667 333 1622 3 chr3B.!!$F2 1289
2 TraesCS3D01G237400 chr3A 442900844 442901885 1041 True 438.333333 922 91.212000 584 1614 3 chr3A.!!$R2 1030
3 TraesCS3D01G237400 chr3A 442910469 442911023 554 True 423.550000 761 95.916500 4 575 2 chr3A.!!$R3 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
991 2400 0.747852 TGTGTGCGGTGTAGTGAAGA 59.252 50.0 0.0 0.0 0.0 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2025 3460 0.026803 GAACTCATCGCCGCACATTC 59.973 55.0 0.0 0.0 0.0 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 70 2.336945 TCTGGCACATGGATAGCAAG 57.663 50.000 0.00 0.00 38.20 4.01
123 126 4.688021 GTGATACACCAGTCCTTCAGATC 58.312 47.826 0.00 0.00 0.00 2.75
126 129 3.182887 ACACCAGTCCTTCAGATCTCT 57.817 47.619 0.00 0.00 0.00 3.10
127 130 3.515562 ACACCAGTCCTTCAGATCTCTT 58.484 45.455 0.00 0.00 0.00 2.85
184 187 4.929808 ACGTGTGTATGTTTCATCTCCTTC 59.070 41.667 0.00 0.00 0.00 3.46
189 192 6.878923 TGTGTATGTTTCATCTCCTTCGATTT 59.121 34.615 0.00 0.00 0.00 2.17
193 196 5.178797 TGTTTCATCTCCTTCGATTTCCTC 58.821 41.667 0.00 0.00 0.00 3.71
194 197 4.408182 TTCATCTCCTTCGATTTCCTCC 57.592 45.455 0.00 0.00 0.00 4.30
204 207 3.939066 TCGATTTCCTCCTTTCTTGTCC 58.061 45.455 0.00 0.00 0.00 4.02
211 214 2.808543 CCTCCTTTCTTGTCCAAGTTCG 59.191 50.000 6.90 0.00 39.38 3.95
230 233 5.465724 AGTTCGTGTTGTATTCCTTGTCTTC 59.534 40.000 0.00 0.00 0.00 2.87
349 352 6.431234 CCCTTTGTCAAGAAGCAACTTATAGT 59.569 38.462 0.00 0.00 30.57 2.12
383 386 6.062095 TCCTCTTTCTTTTCCGAATCTTGTT 58.938 36.000 0.00 0.00 0.00 2.83
480 483 1.377690 TCACCTGGCCCAAAATCCTA 58.622 50.000 0.00 0.00 0.00 2.94
513 516 5.046950 ACTGAAATCTACTCCCTCTGTTCAC 60.047 44.000 0.00 0.00 0.00 3.18
575 1744 7.915397 ACAATACAAACTGAAATGAGTGAACAC 59.085 33.333 0.00 0.00 0.00 3.32
576 1745 7.807977 ATACAAACTGAAATGAGTGAACACT 57.192 32.000 7.20 7.20 45.84 3.55
577 1746 6.515272 ACAAACTGAAATGAGTGAACACTT 57.485 33.333 8.87 0.00 42.66 3.16
579 1748 7.378181 ACAAACTGAAATGAGTGAACACTTTT 58.622 30.769 8.87 6.62 42.66 2.27
580 1749 7.872483 ACAAACTGAAATGAGTGAACACTTTTT 59.128 29.630 8.87 11.31 42.66 1.94
927 2336 4.521062 CCGGAGCCGAGCAGGAAG 62.521 72.222 11.05 0.00 45.00 3.46
930 2339 2.202864 GAGCCGAGCAGGAAGAGC 60.203 66.667 2.12 0.00 45.00 4.09
991 2400 0.747852 TGTGTGCGGTGTAGTGAAGA 59.252 50.000 0.00 0.00 0.00 2.87
1155 2564 0.842030 TGCAGGACAAGGTGGAGGAT 60.842 55.000 0.00 0.00 0.00 3.24
1261 2670 0.670546 CGCGTGATCTGGGTTCTGTT 60.671 55.000 0.00 0.00 0.00 3.16
1301 2710 3.949348 CGCGTCGCACGATCTTCG 61.949 66.667 18.75 0.00 46.05 3.79
1302 2711 2.576053 GCGTCGCACGATCTTCGA 60.576 61.111 13.44 0.00 46.05 3.71
1303 2712 1.939785 GCGTCGCACGATCTTCGAT 60.940 57.895 13.44 0.00 46.05 3.59
1304 2713 1.857023 GCGTCGCACGATCTTCGATC 61.857 60.000 13.44 0.00 46.05 3.69
1305 2714 0.316278 CGTCGCACGATCTTCGATCT 60.316 55.000 3.62 0.00 46.05 2.75
1306 2715 1.116436 GTCGCACGATCTTCGATCTG 58.884 55.000 3.62 0.00 43.74 2.90
1393 2807 4.107586 CGTGTGAGCTCGCAATAATAAG 57.892 45.455 30.43 12.38 38.19 1.73
1394 2808 3.796717 CGTGTGAGCTCGCAATAATAAGA 59.203 43.478 30.43 2.64 38.19 2.10
1395 2809 4.267690 CGTGTGAGCTCGCAATAATAAGAA 59.732 41.667 30.43 1.85 38.19 2.52
1402 2816 4.966366 GCTCGCAATAATAAGAACTGCTTG 59.034 41.667 0.00 0.00 37.42 4.01
1453 2867 0.317020 GTTCGTGCAAACACTCTGCC 60.317 55.000 0.00 0.00 45.10 4.85
1510 2924 1.215647 GATCAACACGGGCGAGACT 59.784 57.895 0.00 0.00 0.00 3.24
1514 2928 1.079819 AACACGGGCGAGACTGATG 60.080 57.895 0.00 0.00 0.00 3.07
1560 2995 0.598680 GGGACGCACTATGCTAGCTG 60.599 60.000 17.23 6.81 42.25 4.24
1561 2996 0.103208 GGACGCACTATGCTAGCTGT 59.897 55.000 17.23 9.36 42.25 4.40
1582 3017 1.635487 AGCAAAGGCCACTATGGAAGA 59.365 47.619 5.01 0.00 40.96 2.87
1625 3060 8.112016 TGTAGAAATGTAGAATCCTCCTATCG 57.888 38.462 0.00 0.00 0.00 2.92
1626 3061 7.724506 TGTAGAAATGTAGAATCCTCCTATCGT 59.275 37.037 0.00 0.00 0.00 3.73
1627 3062 6.987386 AGAAATGTAGAATCCTCCTATCGTG 58.013 40.000 0.00 0.00 0.00 4.35
1628 3063 5.730296 AATGTAGAATCCTCCTATCGTGG 57.270 43.478 0.00 0.00 0.00 4.94
1629 3064 2.891580 TGTAGAATCCTCCTATCGTGGC 59.108 50.000 0.00 0.00 0.00 5.01
1630 3065 2.088104 AGAATCCTCCTATCGTGGCA 57.912 50.000 0.00 0.00 0.00 4.92
1631 3066 1.689273 AGAATCCTCCTATCGTGGCAC 59.311 52.381 7.79 7.79 0.00 5.01
1632 3067 1.689273 GAATCCTCCTATCGTGGCACT 59.311 52.381 16.72 0.00 0.00 4.40
1633 3068 2.677542 ATCCTCCTATCGTGGCACTA 57.322 50.000 16.72 4.94 0.00 2.74
1634 3069 2.447408 TCCTCCTATCGTGGCACTAA 57.553 50.000 16.72 3.92 0.00 2.24
1635 3070 2.029623 TCCTCCTATCGTGGCACTAAC 58.970 52.381 16.72 0.00 0.00 2.34
1636 3071 1.269102 CCTCCTATCGTGGCACTAACG 60.269 57.143 16.72 2.05 42.36 3.18
1640 3075 3.362262 TCGTGGCACTAACGAGCT 58.638 55.556 16.72 0.00 44.58 4.09
1641 3076 1.080772 TCGTGGCACTAACGAGCTG 60.081 57.895 16.72 0.00 44.58 4.24
1642 3077 2.094659 CGTGGCACTAACGAGCTGG 61.095 63.158 16.72 0.00 43.68 4.85
1643 3078 1.004918 GTGGCACTAACGAGCTGGT 60.005 57.895 11.13 0.00 0.00 4.00
1644 3079 1.005037 TGGCACTAACGAGCTGGTG 60.005 57.895 0.71 0.00 0.00 4.17
1645 3080 1.004918 GGCACTAACGAGCTGGTGT 60.005 57.895 0.71 0.00 32.90 4.16
1646 3081 0.602905 GGCACTAACGAGCTGGTGTT 60.603 55.000 0.71 1.33 32.90 3.32
1647 3082 0.790814 GCACTAACGAGCTGGTGTTC 59.209 55.000 0.71 0.00 32.90 3.18
1648 3083 1.429463 CACTAACGAGCTGGTGTTCC 58.571 55.000 0.71 0.00 0.00 3.62
1649 3084 1.000955 CACTAACGAGCTGGTGTTCCT 59.999 52.381 0.71 0.00 34.23 3.36
1650 3085 1.000955 ACTAACGAGCTGGTGTTCCTG 59.999 52.381 0.71 0.00 36.04 3.86
1651 3086 1.000955 CTAACGAGCTGGTGTTCCTGT 59.999 52.381 0.71 0.00 35.49 4.00
1652 3087 0.249911 AACGAGCTGGTGTTCCTGTC 60.250 55.000 0.71 0.00 35.49 3.51
1653 3088 1.374758 CGAGCTGGTGTTCCTGTCC 60.375 63.158 0.00 0.00 35.49 4.02
1654 3089 1.374758 GAGCTGGTGTTCCTGTCCG 60.375 63.158 0.00 0.00 35.49 4.79
1655 3090 2.358737 GCTGGTGTTCCTGTCCGG 60.359 66.667 0.00 0.00 35.49 5.14
1656 3091 2.358737 CTGGTGTTCCTGTCCGGC 60.359 66.667 0.00 0.00 34.23 6.13
1657 3092 3.164977 TGGTGTTCCTGTCCGGCA 61.165 61.111 0.00 0.00 34.23 5.69
1658 3093 2.668550 GGTGTTCCTGTCCGGCAC 60.669 66.667 0.00 0.00 0.00 5.01
1706 3141 4.883354 GGGGGCTCCTTCATGGCG 62.883 72.222 0.52 0.00 35.26 5.69
1707 3142 3.797353 GGGGCTCCTTCATGGCGA 61.797 66.667 0.00 0.00 35.26 5.54
1708 3143 2.512896 GGGCTCCTTCATGGCGAT 59.487 61.111 0.00 0.00 35.26 4.58
1709 3144 1.599240 GGGCTCCTTCATGGCGATC 60.599 63.158 0.00 0.00 35.26 3.69
1710 3145 1.958205 GGCTCCTTCATGGCGATCG 60.958 63.158 11.69 11.69 35.26 3.69
1711 3146 1.958205 GCTCCTTCATGGCGATCGG 60.958 63.158 18.30 0.00 35.26 4.18
1712 3147 1.301244 CTCCTTCATGGCGATCGGG 60.301 63.158 18.30 7.62 35.26 5.14
1713 3148 2.974698 CCTTCATGGCGATCGGGC 60.975 66.667 18.30 10.50 42.69 6.13
1714 3149 3.341043 CTTCATGGCGATCGGGCG 61.341 66.667 18.30 0.00 46.04 6.13
1715 3150 4.155733 TTCATGGCGATCGGGCGT 62.156 61.111 18.30 8.53 46.04 5.68
1722 3157 4.143333 CGATCGGGCGTGGGAAGT 62.143 66.667 7.38 0.00 0.00 3.01
1723 3158 2.511600 GATCGGGCGTGGGAAGTG 60.512 66.667 0.00 0.00 0.00 3.16
1724 3159 4.778143 ATCGGGCGTGGGAAGTGC 62.778 66.667 0.00 0.00 0.00 4.40
1729 3164 4.980805 GCGTGGGAAGTGCGGTGA 62.981 66.667 0.00 0.00 0.00 4.02
1730 3165 2.047274 CGTGGGAAGTGCGGTGAT 60.047 61.111 0.00 0.00 0.00 3.06
1731 3166 2.390599 CGTGGGAAGTGCGGTGATG 61.391 63.158 0.00 0.00 0.00 3.07
1732 3167 1.302511 GTGGGAAGTGCGGTGATGT 60.303 57.895 0.00 0.00 0.00 3.06
1733 3168 1.003839 TGGGAAGTGCGGTGATGTC 60.004 57.895 0.00 0.00 0.00 3.06
1734 3169 2.100631 GGGAAGTGCGGTGATGTCG 61.101 63.158 0.00 0.00 0.00 4.35
1735 3170 1.374252 GGAAGTGCGGTGATGTCGT 60.374 57.895 0.00 0.00 0.00 4.34
1736 3171 1.626654 GGAAGTGCGGTGATGTCGTG 61.627 60.000 0.00 0.00 0.00 4.35
1737 3172 1.626654 GAAGTGCGGTGATGTCGTGG 61.627 60.000 0.00 0.00 0.00 4.94
1738 3173 2.048597 GTGCGGTGATGTCGTGGA 60.049 61.111 0.00 0.00 0.00 4.02
1739 3174 2.048597 TGCGGTGATGTCGTGGAC 60.049 61.111 0.00 0.00 0.00 4.02
1740 3175 3.179265 GCGGTGATGTCGTGGACG 61.179 66.667 0.00 0.00 41.45 4.79
1741 3176 2.257371 CGGTGATGTCGTGGACGT 59.743 61.111 0.00 0.00 40.80 4.34
1742 3177 1.800315 CGGTGATGTCGTGGACGTC 60.800 63.158 7.13 7.13 45.62 4.34
1745 3180 3.750162 GATGTCGTGGACGTCGTG 58.250 61.111 9.92 1.53 38.54 4.35
1746 3181 1.800315 GATGTCGTGGACGTCGTGG 60.800 63.158 9.92 0.53 38.54 4.94
1747 3182 2.467946 GATGTCGTGGACGTCGTGGT 62.468 60.000 9.92 0.00 38.54 4.16
1748 3183 2.026590 GTCGTGGACGTCGTGGTT 59.973 61.111 9.92 0.00 40.80 3.67
1749 3184 2.026445 TCGTGGACGTCGTGGTTG 59.974 61.111 9.92 0.00 40.80 3.77
1750 3185 3.698463 CGTGGACGTCGTGGTTGC 61.698 66.667 9.92 0.00 34.11 4.17
1751 3186 3.343421 GTGGACGTCGTGGTTGCC 61.343 66.667 9.92 0.00 0.00 4.52
1752 3187 4.953868 TGGACGTCGTGGTTGCCG 62.954 66.667 9.92 0.00 0.00 5.69
1754 3189 4.651008 GACGTCGTGGTTGCCGGA 62.651 66.667 5.05 0.00 0.00 5.14
1755 3190 4.657824 ACGTCGTGGTTGCCGGAG 62.658 66.667 5.05 0.00 0.00 4.63
1774 3209 2.038975 AGCGGGGCTCCTACTTGA 59.961 61.111 0.00 0.00 30.62 3.02
1775 3210 2.187163 GCGGGGCTCCTACTTGAC 59.813 66.667 0.00 0.00 0.00 3.18
1776 3211 2.494918 CGGGGCTCCTACTTGACG 59.505 66.667 0.00 0.00 0.00 4.35
1777 3212 2.348888 CGGGGCTCCTACTTGACGT 61.349 63.158 0.00 0.00 0.00 4.34
1778 3213 1.218316 GGGGCTCCTACTTGACGTG 59.782 63.158 0.00 0.00 0.00 4.49
1779 3214 1.218316 GGGCTCCTACTTGACGTGG 59.782 63.158 0.00 0.00 0.00 4.94
1780 3215 1.542187 GGGCTCCTACTTGACGTGGT 61.542 60.000 0.00 0.00 0.00 4.16
1781 3216 1.180029 GGCTCCTACTTGACGTGGTA 58.820 55.000 0.00 0.00 0.00 3.25
1782 3217 1.135170 GGCTCCTACTTGACGTGGTAC 60.135 57.143 0.00 0.00 0.00 3.34
1792 3227 4.874534 CGTGGTACGGTGGTAGTG 57.125 61.111 0.00 0.00 38.08 2.74
1793 3228 2.256391 CGTGGTACGGTGGTAGTGA 58.744 57.895 0.00 0.00 38.08 3.41
1794 3229 0.169672 CGTGGTACGGTGGTAGTGAG 59.830 60.000 0.00 0.00 38.08 3.51
1795 3230 0.529378 GTGGTACGGTGGTAGTGAGG 59.471 60.000 0.00 0.00 0.00 3.86
1796 3231 0.405198 TGGTACGGTGGTAGTGAGGA 59.595 55.000 0.00 0.00 0.00 3.71
1797 3232 1.101331 GGTACGGTGGTAGTGAGGAG 58.899 60.000 0.00 0.00 0.00 3.69
1798 3233 1.340405 GGTACGGTGGTAGTGAGGAGA 60.340 57.143 0.00 0.00 0.00 3.71
1799 3234 1.742268 GTACGGTGGTAGTGAGGAGAC 59.258 57.143 0.00 0.00 0.00 3.36
1800 3235 0.959372 ACGGTGGTAGTGAGGAGACG 60.959 60.000 0.00 0.00 0.00 4.18
1801 3236 0.675837 CGGTGGTAGTGAGGAGACGA 60.676 60.000 0.00 0.00 0.00 4.20
1802 3237 0.810016 GGTGGTAGTGAGGAGACGAC 59.190 60.000 0.00 0.00 0.00 4.34
1803 3238 0.810016 GTGGTAGTGAGGAGACGACC 59.190 60.000 0.00 0.00 40.88 4.79
1804 3239 0.675837 TGGTAGTGAGGAGACGACCG 60.676 60.000 0.00 0.00 42.78 4.79
1805 3240 0.676151 GGTAGTGAGGAGACGACCGT 60.676 60.000 0.00 0.00 32.76 4.83
1806 3241 0.447011 GTAGTGAGGAGACGACCGTG 59.553 60.000 0.00 0.00 34.73 4.94
1807 3242 0.675837 TAGTGAGGAGACGACCGTGG 60.676 60.000 0.00 0.00 34.73 4.94
1808 3243 3.371063 TGAGGAGACGACCGTGGC 61.371 66.667 0.00 0.00 34.73 5.01
1809 3244 3.063084 GAGGAGACGACCGTGGCT 61.063 66.667 0.00 0.00 34.73 4.75
1810 3245 3.053849 GAGGAGACGACCGTGGCTC 62.054 68.421 0.00 1.35 34.73 4.70
1811 3246 4.131088 GGAGACGACCGTGGCTCC 62.131 72.222 12.46 12.46 40.04 4.70
1812 3247 3.063084 GAGACGACCGTGGCTCCT 61.063 66.667 0.00 0.00 0.00 3.69
1813 3248 3.053849 GAGACGACCGTGGCTCCTC 62.054 68.421 0.00 0.00 0.00 3.71
1814 3249 4.131088 GACGACCGTGGCTCCTCC 62.131 72.222 0.00 0.00 0.00 4.30
1815 3250 4.680537 ACGACCGTGGCTCCTCCT 62.681 66.667 0.00 0.00 35.26 3.69
1816 3251 3.382832 CGACCGTGGCTCCTCCTT 61.383 66.667 0.00 0.00 35.26 3.36
1817 3252 2.579738 GACCGTGGCTCCTCCTTC 59.420 66.667 0.00 0.00 35.26 3.46
1818 3253 2.203788 ACCGTGGCTCCTCCTTCA 60.204 61.111 0.00 0.00 35.26 3.02
1819 3254 2.266055 CCGTGGCTCCTCCTTCAC 59.734 66.667 0.00 0.00 35.26 3.18
1820 3255 2.125912 CGTGGCTCCTCCTTCACG 60.126 66.667 0.00 0.00 44.98 4.35
1821 3256 2.932234 CGTGGCTCCTCCTTCACGT 61.932 63.158 6.55 0.00 45.15 4.49
1822 3257 1.374758 GTGGCTCCTCCTTCACGTG 60.375 63.158 9.94 9.94 35.26 4.49
1823 3258 1.837051 TGGCTCCTCCTTCACGTGT 60.837 57.895 16.51 0.00 35.26 4.49
1824 3259 1.374758 GGCTCCTCCTTCACGTGTG 60.375 63.158 16.51 9.72 0.00 3.82
1825 3260 1.374758 GCTCCTCCTTCACGTGTGG 60.375 63.158 16.51 18.16 0.00 4.17
1826 3261 1.816863 GCTCCTCCTTCACGTGTGGA 61.817 60.000 23.75 23.75 0.00 4.02
1827 3262 0.244994 CTCCTCCTTCACGTGTGGAG 59.755 60.000 33.02 33.02 45.02 3.86
1830 3265 2.351777 TCCTTCACGTGTGGAGAGG 58.648 57.895 22.32 18.03 38.49 3.69
1831 3266 1.374758 CCTTCACGTGTGGAGAGGC 60.375 63.158 16.51 0.00 38.49 4.70
1832 3267 1.734477 CTTCACGTGTGGAGAGGCG 60.734 63.158 16.51 0.00 38.49 5.52
1833 3268 3.220999 TTCACGTGTGGAGAGGCGG 62.221 63.158 16.51 0.00 0.00 6.13
1837 3272 4.803426 GTGTGGAGAGGCGGCGAG 62.803 72.222 12.98 0.00 0.00 5.03
1870 3305 3.827898 CGGTCACGGAGGAGCTCC 61.828 72.222 26.22 26.22 46.44 4.70
1878 3313 2.267324 GAGGAGCTCCAGGTGTGC 59.733 66.667 33.90 10.36 38.89 4.57
1879 3314 2.203907 AGGAGCTCCAGGTGTGCT 60.204 61.111 33.90 8.39 46.06 4.40
1880 3315 2.046507 GGAGCTCCAGGTGTGCTG 60.047 66.667 28.43 0.00 43.56 4.41
1881 3316 2.745492 GAGCTCCAGGTGTGCTGC 60.745 66.667 0.87 0.00 43.56 5.25
1882 3317 4.694233 AGCTCCAGGTGTGCTGCG 62.694 66.667 0.00 0.00 42.02 5.18
1883 3318 4.996434 GCTCCAGGTGTGCTGCGT 62.996 66.667 0.00 0.00 0.00 5.24
1884 3319 2.656646 CTCCAGGTGTGCTGCGTA 59.343 61.111 0.00 0.00 0.00 4.42
1885 3320 1.738099 CTCCAGGTGTGCTGCGTAC 60.738 63.158 0.00 0.00 0.00 3.67
1886 3321 2.159819 CTCCAGGTGTGCTGCGTACT 62.160 60.000 0.00 0.00 0.00 2.73
1887 3322 1.738099 CCAGGTGTGCTGCGTACTC 60.738 63.158 0.00 0.00 0.00 2.59
1888 3323 2.088763 CAGGTGTGCTGCGTACTCG 61.089 63.158 0.00 0.00 40.37 4.18
1898 3333 4.591852 CGTACTCGCTCATCCGTC 57.408 61.111 0.00 0.00 0.00 4.79
1899 3334 2.015382 CGTACTCGCTCATCCGTCT 58.985 57.895 0.00 0.00 0.00 4.18
1900 3335 0.377554 CGTACTCGCTCATCCGTCTT 59.622 55.000 0.00 0.00 0.00 3.01
1901 3336 1.595003 CGTACTCGCTCATCCGTCTTC 60.595 57.143 0.00 0.00 0.00 2.87
1902 3337 0.656259 TACTCGCTCATCCGTCTTCG 59.344 55.000 0.00 0.00 0.00 3.79
1903 3338 1.306642 ACTCGCTCATCCGTCTTCGT 61.307 55.000 0.00 0.00 35.01 3.85
1904 3339 0.863538 CTCGCTCATCCGTCTTCGTG 60.864 60.000 0.00 0.00 35.01 4.35
1905 3340 1.136774 CGCTCATCCGTCTTCGTGA 59.863 57.895 0.00 0.00 35.01 4.35
1906 3341 0.863538 CGCTCATCCGTCTTCGTGAG 60.864 60.000 0.00 0.00 40.62 3.51
1907 3342 0.526524 GCTCATCCGTCTTCGTGAGG 60.527 60.000 0.00 0.00 39.18 3.86
1908 3343 1.095600 CTCATCCGTCTTCGTGAGGA 58.904 55.000 0.00 0.00 36.90 3.71
1909 3344 1.064803 CTCATCCGTCTTCGTGAGGAG 59.935 57.143 0.00 0.00 38.07 3.69
1910 3345 0.101399 CATCCGTCTTCGTGAGGAGG 59.899 60.000 3.33 0.00 37.31 4.30
1911 3346 0.323542 ATCCGTCTTCGTGAGGAGGT 60.324 55.000 1.85 0.00 37.31 3.85
1912 3347 1.213013 CCGTCTTCGTGAGGAGGTG 59.787 63.158 1.85 0.00 37.31 4.00
1913 3348 1.444553 CGTCTTCGTGAGGAGGTGC 60.445 63.158 0.00 0.00 37.31 5.01
1914 3349 1.444553 GTCTTCGTGAGGAGGTGCG 60.445 63.158 0.00 0.00 37.31 5.34
1915 3350 2.125912 CTTCGTGAGGAGGTGCGG 60.126 66.667 0.00 0.00 31.14 5.69
1916 3351 2.915659 TTCGTGAGGAGGTGCGGT 60.916 61.111 0.00 0.00 0.00 5.68
1917 3352 2.436087 CTTCGTGAGGAGGTGCGGTT 62.436 60.000 0.00 0.00 31.14 4.44
1918 3353 2.709125 TTCGTGAGGAGGTGCGGTTG 62.709 60.000 0.00 0.00 0.00 3.77
1919 3354 2.426023 GTGAGGAGGTGCGGTTGT 59.574 61.111 0.00 0.00 0.00 3.32
1920 3355 1.961277 GTGAGGAGGTGCGGTTGTG 60.961 63.158 0.00 0.00 0.00 3.33
1921 3356 2.426023 GAGGAGGTGCGGTTGTGT 59.574 61.111 0.00 0.00 0.00 3.72
1922 3357 1.668151 GAGGAGGTGCGGTTGTGTC 60.668 63.158 0.00 0.00 0.00 3.67
1923 3358 2.668550 GGAGGTGCGGTTGTGTCC 60.669 66.667 0.00 0.00 0.00 4.02
1924 3359 2.426023 GAGGTGCGGTTGTGTCCT 59.574 61.111 0.00 0.00 0.00 3.85
1925 3360 1.668151 GAGGTGCGGTTGTGTCCTC 60.668 63.158 0.00 0.00 37.98 3.71
1926 3361 2.110213 GGTGCGGTTGTGTCCTCA 59.890 61.111 0.00 0.00 0.00 3.86
1927 3362 1.302511 GGTGCGGTTGTGTCCTCAT 60.303 57.895 0.00 0.00 0.00 2.90
1928 3363 0.036765 GGTGCGGTTGTGTCCTCATA 60.037 55.000 0.00 0.00 0.00 2.15
1929 3364 1.359848 GTGCGGTTGTGTCCTCATAG 58.640 55.000 0.00 0.00 0.00 2.23
1930 3365 0.973632 TGCGGTTGTGTCCTCATAGT 59.026 50.000 0.00 0.00 0.00 2.12
1931 3366 1.067142 TGCGGTTGTGTCCTCATAGTC 60.067 52.381 0.00 0.00 0.00 2.59
1932 3367 1.909376 CGGTTGTGTCCTCATAGTCG 58.091 55.000 0.00 0.00 0.00 4.18
1933 3368 1.469251 CGGTTGTGTCCTCATAGTCGG 60.469 57.143 0.00 0.00 0.00 4.79
1934 3369 1.822990 GGTTGTGTCCTCATAGTCGGA 59.177 52.381 0.00 0.00 0.00 4.55
1935 3370 2.159226 GGTTGTGTCCTCATAGTCGGAG 60.159 54.545 0.00 0.00 0.00 4.63
1942 3377 1.974265 CTCATAGTCGGAGGAGAGCA 58.026 55.000 0.00 0.00 28.45 4.26
1943 3378 1.606668 CTCATAGTCGGAGGAGAGCAC 59.393 57.143 0.00 0.00 28.45 4.40
1944 3379 0.309302 CATAGTCGGAGGAGAGCACG 59.691 60.000 0.00 0.00 0.00 5.34
1945 3380 0.180642 ATAGTCGGAGGAGAGCACGA 59.819 55.000 0.00 0.00 0.00 4.35
1946 3381 2.486042 GTCGGAGGAGAGCACGAC 59.514 66.667 0.00 0.00 46.89 4.34
1947 3382 2.750637 TCGGAGGAGAGCACGACC 60.751 66.667 0.00 0.00 0.00 4.79
1948 3383 2.752238 CGGAGGAGAGCACGACCT 60.752 66.667 0.00 3.14 36.68 3.85
1949 3384 2.766400 CGGAGGAGAGCACGACCTC 61.766 68.421 16.96 16.96 46.44 3.85
1952 3387 3.202467 GGAGAGCACGACCTCCTC 58.798 66.667 0.00 0.00 44.23 3.71
1953 3388 2.419739 GGAGAGCACGACCTCCTCC 61.420 68.421 0.00 0.00 44.23 4.30
1954 3389 1.379309 GAGAGCACGACCTCCTCCT 60.379 63.158 0.00 0.00 32.17 3.69
1955 3390 0.968393 GAGAGCACGACCTCCTCCTT 60.968 60.000 0.00 0.00 32.17 3.36
1956 3391 1.216710 GAGCACGACCTCCTCCTTG 59.783 63.158 0.00 0.00 0.00 3.61
1957 3392 1.534235 AGCACGACCTCCTCCTTGT 60.534 57.895 0.00 0.00 0.00 3.16
1958 3393 1.079750 GCACGACCTCCTCCTTGTC 60.080 63.158 0.00 0.00 0.00 3.18
1959 3394 1.536943 GCACGACCTCCTCCTTGTCT 61.537 60.000 0.00 0.00 0.00 3.41
1960 3395 0.244994 CACGACCTCCTCCTTGTCTG 59.755 60.000 0.00 0.00 0.00 3.51
1961 3396 0.178958 ACGACCTCCTCCTTGTCTGT 60.179 55.000 0.00 0.00 0.00 3.41
1962 3397 0.528470 CGACCTCCTCCTTGTCTGTC 59.472 60.000 0.00 0.00 0.00 3.51
1963 3398 1.633774 GACCTCCTCCTTGTCTGTCA 58.366 55.000 0.00 0.00 0.00 3.58
1964 3399 2.183679 GACCTCCTCCTTGTCTGTCAT 58.816 52.381 0.00 0.00 0.00 3.06
1965 3400 1.905215 ACCTCCTCCTTGTCTGTCATG 59.095 52.381 0.00 0.00 0.00 3.07
1966 3401 2.182827 CCTCCTCCTTGTCTGTCATGA 58.817 52.381 0.00 0.00 0.00 3.07
1967 3402 2.093764 CCTCCTCCTTGTCTGTCATGAC 60.094 54.545 19.27 19.27 37.47 3.06
1968 3403 1.546029 TCCTCCTTGTCTGTCATGACG 59.454 52.381 20.54 14.91 39.64 4.35
1969 3404 1.404717 CCTCCTTGTCTGTCATGACGG 60.405 57.143 26.03 26.03 39.64 4.79
1970 3405 0.037326 TCCTTGTCTGTCATGACGGC 60.037 55.000 26.94 21.48 39.64 5.68
1971 3406 1.354337 CCTTGTCTGTCATGACGGCG 61.354 60.000 26.94 14.97 39.64 6.46
1972 3407 1.354337 CTTGTCTGTCATGACGGCGG 61.354 60.000 26.94 14.00 39.64 6.13
1973 3408 1.811645 TTGTCTGTCATGACGGCGGA 61.812 55.000 26.94 15.84 39.64 5.54
1974 3409 1.517257 GTCTGTCATGACGGCGGAG 60.517 63.158 26.94 15.44 37.60 4.63
1975 3410 2.202797 CTGTCATGACGGCGGAGG 60.203 66.667 21.34 0.00 0.00 4.30
1976 3411 2.678580 TGTCATGACGGCGGAGGA 60.679 61.111 20.54 0.90 0.00 3.71
1977 3412 2.105128 GTCATGACGGCGGAGGAG 59.895 66.667 13.24 0.00 0.00 3.69
1978 3413 3.147595 TCATGACGGCGGAGGAGG 61.148 66.667 13.24 0.00 0.00 4.30
1979 3414 3.147595 CATGACGGCGGAGGAGGA 61.148 66.667 13.24 0.00 0.00 3.71
1980 3415 3.148279 ATGACGGCGGAGGAGGAC 61.148 66.667 13.24 0.00 0.00 3.85
1989 3424 4.779733 GAGGAGGACGGCCCAGGA 62.780 72.222 1.76 0.00 37.41 3.86
1990 3425 4.787280 AGGAGGACGGCCCAGGAG 62.787 72.222 1.76 0.00 37.41 3.69
2009 3444 3.706140 GGCAACGCGACTATCCTG 58.294 61.111 15.93 0.00 0.00 3.86
2010 3445 2.526120 GGCAACGCGACTATCCTGC 61.526 63.158 15.93 9.24 0.00 4.85
2011 3446 2.526120 GCAACGCGACTATCCTGCC 61.526 63.158 15.93 0.00 0.00 4.85
2012 3447 2.104331 AACGCGACTATCCTGCCG 59.896 61.111 15.93 0.00 0.00 5.69
2013 3448 2.412323 AACGCGACTATCCTGCCGA 61.412 57.895 15.93 0.00 0.00 5.54
2014 3449 2.050895 CGCGACTATCCTGCCGAG 60.051 66.667 0.00 0.00 0.00 4.63
2015 3450 2.543802 CGCGACTATCCTGCCGAGA 61.544 63.158 0.00 0.00 0.00 4.04
2016 3451 1.284408 GCGACTATCCTGCCGAGAG 59.716 63.158 0.00 0.00 35.82 3.20
2017 3452 1.448922 GCGACTATCCTGCCGAGAGT 61.449 60.000 0.00 0.00 45.80 3.24
2018 3453 1.025812 CGACTATCCTGCCGAGAGTT 58.974 55.000 0.33 0.00 43.15 3.01
2019 3454 1.268794 CGACTATCCTGCCGAGAGTTG 60.269 57.143 0.33 0.20 43.15 3.16
2020 3455 1.067821 GACTATCCTGCCGAGAGTTGG 59.932 57.143 0.33 0.00 43.15 3.77
2021 3456 0.390860 CTATCCTGCCGAGAGTTGGG 59.609 60.000 0.00 0.00 0.00 4.12
2022 3457 0.032515 TATCCTGCCGAGAGTTGGGA 60.033 55.000 0.00 0.00 0.00 4.37
2023 3458 1.333636 ATCCTGCCGAGAGTTGGGAG 61.334 60.000 0.00 0.00 43.92 4.30
2024 3459 1.984570 CCTGCCGAGAGTTGGGAGA 60.985 63.158 3.34 0.00 46.95 3.71
2025 3460 1.515020 CTGCCGAGAGTTGGGAGAG 59.485 63.158 0.00 0.00 46.95 3.20
2026 3461 0.967887 CTGCCGAGAGTTGGGAGAGA 60.968 60.000 0.00 0.00 46.95 3.10
2027 3462 0.541998 TGCCGAGAGTTGGGAGAGAA 60.542 55.000 0.00 0.00 0.00 2.87
2028 3463 0.827368 GCCGAGAGTTGGGAGAGAAT 59.173 55.000 0.00 0.00 0.00 2.40
2029 3464 1.472376 GCCGAGAGTTGGGAGAGAATG 60.472 57.143 0.00 0.00 0.00 2.67
2030 3465 1.827969 CCGAGAGTTGGGAGAGAATGT 59.172 52.381 0.00 0.00 0.00 2.71
2031 3466 2.417924 CCGAGAGTTGGGAGAGAATGTG 60.418 54.545 0.00 0.00 0.00 3.21
2032 3467 2.626840 GAGAGTTGGGAGAGAATGTGC 58.373 52.381 0.00 0.00 0.00 4.57
2033 3468 1.066573 AGAGTTGGGAGAGAATGTGCG 60.067 52.381 0.00 0.00 0.00 5.34
2034 3469 0.036010 AGTTGGGAGAGAATGTGCGG 60.036 55.000 0.00 0.00 0.00 5.69
2035 3470 1.377202 TTGGGAGAGAATGTGCGGC 60.377 57.895 0.00 0.00 0.00 6.53
2036 3471 2.892425 GGGAGAGAATGTGCGGCG 60.892 66.667 0.51 0.51 0.00 6.46
2037 3472 2.184322 GGAGAGAATGTGCGGCGA 59.816 61.111 12.98 0.00 0.00 5.54
2038 3473 1.227380 GGAGAGAATGTGCGGCGAT 60.227 57.895 12.98 0.00 0.00 4.58
2039 3474 1.493950 GGAGAGAATGTGCGGCGATG 61.494 60.000 12.98 0.00 0.00 3.84
2040 3475 0.528466 GAGAGAATGTGCGGCGATGA 60.528 55.000 12.98 0.00 0.00 2.92
2041 3476 0.529337 AGAGAATGTGCGGCGATGAG 60.529 55.000 12.98 0.00 0.00 2.90
2042 3477 0.807667 GAGAATGTGCGGCGATGAGT 60.808 55.000 12.98 0.00 0.00 3.41
2043 3478 0.391661 AGAATGTGCGGCGATGAGTT 60.392 50.000 12.98 0.00 0.00 3.01
2044 3479 0.026803 GAATGTGCGGCGATGAGTTC 59.973 55.000 12.98 3.84 0.00 3.01
2045 3480 0.673333 AATGTGCGGCGATGAGTTCA 60.673 50.000 12.98 0.00 0.00 3.18
2046 3481 1.086067 ATGTGCGGCGATGAGTTCAG 61.086 55.000 12.98 0.00 0.00 3.02
2047 3482 2.125552 TGCGGCGATGAGTTCAGG 60.126 61.111 12.98 0.00 0.00 3.86
2048 3483 2.125512 GCGGCGATGAGTTCAGGT 60.126 61.111 12.98 0.00 0.00 4.00
2049 3484 2.456119 GCGGCGATGAGTTCAGGTG 61.456 63.158 12.98 0.00 0.00 4.00
2050 3485 1.811266 CGGCGATGAGTTCAGGTGG 60.811 63.158 0.00 0.00 0.00 4.61
2051 3486 1.450312 GGCGATGAGTTCAGGTGGG 60.450 63.158 0.00 0.00 0.00 4.61
2052 3487 1.596934 GCGATGAGTTCAGGTGGGA 59.403 57.895 0.00 0.00 0.00 4.37
2053 3488 0.741221 GCGATGAGTTCAGGTGGGAC 60.741 60.000 0.00 0.00 0.00 4.46
2054 3489 0.108138 CGATGAGTTCAGGTGGGACC 60.108 60.000 0.00 0.00 38.99 4.46
2055 3490 0.984230 GATGAGTTCAGGTGGGACCA 59.016 55.000 0.00 0.00 41.95 4.02
2056 3491 1.561542 GATGAGTTCAGGTGGGACCAT 59.438 52.381 0.00 0.00 41.95 3.55
2057 3492 0.692476 TGAGTTCAGGTGGGACCATG 59.308 55.000 0.00 0.00 41.95 3.66
2058 3493 0.984230 GAGTTCAGGTGGGACCATGA 59.016 55.000 0.00 0.00 41.95 3.07
2059 3494 1.351017 GAGTTCAGGTGGGACCATGAA 59.649 52.381 0.00 3.82 41.95 2.57
2060 3495 1.073923 AGTTCAGGTGGGACCATGAAC 59.926 52.381 21.69 21.69 45.76 3.18
2061 3496 0.404040 TTCAGGTGGGACCATGAACC 59.596 55.000 0.00 0.00 41.95 3.62
2062 3497 0.770166 TCAGGTGGGACCATGAACCA 60.770 55.000 0.00 0.00 41.95 3.67
2064 3499 3.981308 GTGGGACCATGAACCACG 58.019 61.111 14.69 0.00 44.41 4.94
2065 3500 1.072505 GTGGGACCATGAACCACGT 59.927 57.895 14.69 0.00 44.41 4.49
2066 3501 0.322322 GTGGGACCATGAACCACGTA 59.678 55.000 14.69 0.00 44.41 3.57
2067 3502 0.611200 TGGGACCATGAACCACGTAG 59.389 55.000 0.00 0.00 0.00 3.51
2068 3503 4.249888 GTGGGACCATGAACCACGTAGT 62.250 54.545 14.69 0.00 44.41 2.73
2069 3504 1.405121 GGGACCATGAACCACGTAGTC 60.405 57.143 0.00 0.00 41.61 2.59
2070 3505 1.549170 GGACCATGAACCACGTAGTCT 59.451 52.381 0.00 0.00 41.61 3.24
2071 3506 2.607187 GACCATGAACCACGTAGTCTG 58.393 52.381 0.00 0.00 41.61 3.51
2072 3507 1.275291 ACCATGAACCACGTAGTCTGG 59.725 52.381 0.00 8.19 41.61 3.86
2073 3508 1.359848 CATGAACCACGTAGTCTGGC 58.640 55.000 0.00 0.00 41.61 4.85
2074 3509 0.973632 ATGAACCACGTAGTCTGGCA 59.026 50.000 0.00 0.00 41.61 4.92
2075 3510 0.032952 TGAACCACGTAGTCTGGCAC 59.967 55.000 0.00 0.00 41.61 5.01
2076 3511 0.032952 GAACCACGTAGTCTGGCACA 59.967 55.000 0.00 0.00 41.61 4.57
2077 3512 0.685097 AACCACGTAGTCTGGCACAT 59.315 50.000 0.00 0.00 41.61 3.21
2078 3513 1.552578 ACCACGTAGTCTGGCACATA 58.447 50.000 0.00 0.00 41.61 2.29
2079 3514 2.108168 ACCACGTAGTCTGGCACATAT 58.892 47.619 0.00 0.00 41.61 1.78
2080 3515 3.293337 ACCACGTAGTCTGGCACATATA 58.707 45.455 0.00 0.00 41.61 0.86
2081 3516 3.067742 ACCACGTAGTCTGGCACATATAC 59.932 47.826 0.00 0.00 41.61 1.47
2082 3517 3.067601 CCACGTAGTCTGGCACATATACA 59.932 47.826 0.00 0.00 41.61 2.29
2083 3518 4.262036 CCACGTAGTCTGGCACATATACAT 60.262 45.833 0.00 0.00 41.61 2.29
2084 3519 4.681483 CACGTAGTCTGGCACATATACATG 59.319 45.833 0.00 0.00 41.61 3.21
2085 3520 4.237724 CGTAGTCTGGCACATATACATGG 58.762 47.826 0.00 0.00 38.20 3.66
2086 3521 4.022329 CGTAGTCTGGCACATATACATGGA 60.022 45.833 0.00 0.00 38.20 3.41
2087 3522 5.508994 CGTAGTCTGGCACATATACATGGAA 60.509 44.000 0.00 0.00 38.20 3.53
2088 3523 4.708177 AGTCTGGCACATATACATGGAAC 58.292 43.478 0.00 0.00 38.20 3.62
2089 3524 4.410228 AGTCTGGCACATATACATGGAACT 59.590 41.667 0.00 0.00 38.20 3.01
2090 3525 5.602561 AGTCTGGCACATATACATGGAACTA 59.397 40.000 0.00 0.00 38.20 2.24
2091 3526 5.928839 GTCTGGCACATATACATGGAACTAG 59.071 44.000 0.00 0.00 38.20 2.57
2092 3527 5.602561 TCTGGCACATATACATGGAACTAGT 59.397 40.000 0.00 0.00 38.20 2.57
2093 3528 5.853936 TGGCACATATACATGGAACTAGTC 58.146 41.667 0.00 0.00 36.39 2.59
2094 3529 7.016277 CTGGCACATATACATGGAACTAGTCC 61.016 46.154 0.00 0.00 42.89 3.85
2105 3540 3.981211 GGAACTAGTCCAAACGTGTACA 58.019 45.455 0.00 0.00 46.97 2.90
2106 3541 4.370917 GGAACTAGTCCAAACGTGTACAA 58.629 43.478 0.00 0.00 46.97 2.41
2107 3542 4.810491 GGAACTAGTCCAAACGTGTACAAA 59.190 41.667 0.00 0.00 46.97 2.83
2108 3543 5.277011 GGAACTAGTCCAAACGTGTACAAAC 60.277 44.000 0.00 0.00 46.97 2.93
2109 3544 4.122046 ACTAGTCCAAACGTGTACAAACC 58.878 43.478 0.00 0.00 0.00 3.27
2110 3545 3.271055 AGTCCAAACGTGTACAAACCT 57.729 42.857 0.00 0.00 0.00 3.50
2111 3546 3.200483 AGTCCAAACGTGTACAAACCTC 58.800 45.455 0.00 0.00 0.00 3.85
2112 3547 2.033492 GTCCAAACGTGTACAAACCTCG 60.033 50.000 0.00 0.00 0.00 4.63
2113 3548 1.333435 CCAAACGTGTACAAACCTCGC 60.333 52.381 0.00 0.00 0.00 5.03
2114 3549 1.595794 CAAACGTGTACAAACCTCGCT 59.404 47.619 0.00 0.00 0.00 4.93
2115 3550 1.214367 AACGTGTACAAACCTCGCTG 58.786 50.000 0.00 0.00 0.00 5.18
2116 3551 0.599204 ACGTGTACAAACCTCGCTGG 60.599 55.000 0.00 0.00 42.93 4.85
2125 3560 3.636231 CCTCGCTGGTTCCCCACA 61.636 66.667 0.00 0.00 35.17 4.17
2126 3561 2.671070 CTCGCTGGTTCCCCACAT 59.329 61.111 0.00 0.00 35.17 3.21
2127 3562 1.002134 CTCGCTGGTTCCCCACATT 60.002 57.895 0.00 0.00 35.17 2.71
2128 3563 0.609131 CTCGCTGGTTCCCCACATTT 60.609 55.000 0.00 0.00 35.17 2.32
2129 3564 0.893270 TCGCTGGTTCCCCACATTTG 60.893 55.000 0.00 0.00 35.17 2.32
2130 3565 1.876497 CGCTGGTTCCCCACATTTGG 61.876 60.000 0.00 0.00 43.50 3.28
2131 3566 0.831711 GCTGGTTCCCCACATTTGGT 60.832 55.000 0.00 0.00 42.10 3.67
2133 3568 1.118356 TGGTTCCCCACATTTGGTGC 61.118 55.000 0.00 0.00 46.50 5.01
2134 3569 1.671166 GTTCCCCACATTTGGTGCC 59.329 57.895 0.00 0.00 46.50 5.01
2135 3570 1.118356 GTTCCCCACATTTGGTGCCA 61.118 55.000 0.00 0.00 46.50 4.92
2136 3571 0.399091 TTCCCCACATTTGGTGCCAA 60.399 50.000 0.00 0.00 46.50 4.52
2137 3572 0.178909 TCCCCACATTTGGTGCCAAT 60.179 50.000 4.32 0.00 46.50 3.16
2138 3573 0.691904 CCCCACATTTGGTGCCAATT 59.308 50.000 4.32 0.00 46.50 2.32
2139 3574 1.073603 CCCCACATTTGGTGCCAATTT 59.926 47.619 4.32 0.00 46.50 1.82
2140 3575 2.304180 CCCCACATTTGGTGCCAATTTA 59.696 45.455 4.32 0.00 46.50 1.40
2141 3576 3.333804 CCCACATTTGGTGCCAATTTAC 58.666 45.455 4.32 0.00 46.50 2.01
2142 3577 3.244353 CCCACATTTGGTGCCAATTTACA 60.244 43.478 4.32 0.00 46.50 2.41
2143 3578 3.995705 CCACATTTGGTGCCAATTTACAG 59.004 43.478 4.32 0.00 46.50 2.74
2144 3579 3.995705 CACATTTGGTGCCAATTTACAGG 59.004 43.478 4.32 0.00 41.36 4.00
2145 3580 3.900601 ACATTTGGTGCCAATTTACAGGA 59.099 39.130 4.32 0.00 35.70 3.86
2146 3581 4.346418 ACATTTGGTGCCAATTTACAGGAA 59.654 37.500 4.32 0.00 35.70 3.36
2147 3582 5.012975 ACATTTGGTGCCAATTTACAGGAAT 59.987 36.000 4.32 0.00 35.70 3.01
2148 3583 5.559148 TTTGGTGCCAATTTACAGGAATT 57.441 34.783 4.32 0.00 35.70 2.17
2149 3584 5.559148 TTGGTGCCAATTTACAGGAATTT 57.441 34.783 0.00 0.00 0.00 1.82
2150 3585 4.892433 TGGTGCCAATTTACAGGAATTTG 58.108 39.130 0.00 0.00 0.00 2.32
2151 3586 4.252878 GGTGCCAATTTACAGGAATTTGG 58.747 43.478 13.03 13.03 45.48 3.28
2152 3587 4.020662 GGTGCCAATTTACAGGAATTTGGA 60.021 41.667 19.50 5.52 45.52 3.53
2153 3588 4.929211 GTGCCAATTTACAGGAATTTGGAC 59.071 41.667 19.50 12.38 45.52 4.02
2154 3589 4.837860 TGCCAATTTACAGGAATTTGGACT 59.162 37.500 19.50 0.00 45.52 3.85
2155 3590 5.047377 TGCCAATTTACAGGAATTTGGACTC 60.047 40.000 19.50 5.92 45.52 3.36
2156 3591 5.640732 CCAATTTACAGGAATTTGGACTCG 58.359 41.667 12.24 0.00 45.52 4.18
2157 3592 4.965119 ATTTACAGGAATTTGGACTCGC 57.035 40.909 0.00 0.00 0.00 5.03
2158 3593 2.004583 TACAGGAATTTGGACTCGCG 57.995 50.000 0.00 0.00 0.00 5.87
2159 3594 0.034896 ACAGGAATTTGGACTCGCGT 59.965 50.000 5.77 0.00 0.00 6.01
2160 3595 0.721718 CAGGAATTTGGACTCGCGTC 59.278 55.000 5.77 0.00 39.49 5.19
2161 3596 0.608640 AGGAATTTGGACTCGCGTCT 59.391 50.000 5.77 0.00 40.10 4.18
2162 3597 1.000145 GGAATTTGGACTCGCGTCTC 59.000 55.000 5.77 1.12 40.10 3.36
2163 3598 1.000145 GAATTTGGACTCGCGTCTCC 59.000 55.000 5.77 11.90 40.10 3.71
2164 3599 0.320374 AATTTGGACTCGCGTCTCCA 59.680 50.000 19.39 19.39 40.10 3.86
2165 3600 0.389948 ATTTGGACTCGCGTCTCCAC 60.390 55.000 21.96 4.58 40.10 4.02
2167 3602 4.477975 GGACTCGCGTCTCCACGG 62.478 72.222 16.75 0.00 46.80 4.94
2168 3603 3.429141 GACTCGCGTCTCCACGGA 61.429 66.667 5.77 0.00 46.80 4.69
2169 3604 3.664223 GACTCGCGTCTCCACGGAC 62.664 68.421 5.77 0.00 46.80 4.79
2170 3605 3.733960 CTCGCGTCTCCACGGACA 61.734 66.667 5.77 0.00 46.80 4.02
2171 3606 3.052620 CTCGCGTCTCCACGGACAT 62.053 63.158 5.77 0.00 46.80 3.06
2172 3607 1.712018 CTCGCGTCTCCACGGACATA 61.712 60.000 5.77 0.00 46.80 2.29
2173 3608 1.099295 TCGCGTCTCCACGGACATAT 61.099 55.000 5.77 0.00 46.80 1.78
2174 3609 0.660595 CGCGTCTCCACGGACATATC 60.661 60.000 0.00 0.00 46.80 1.63
2175 3610 0.669077 GCGTCTCCACGGACATATCT 59.331 55.000 0.00 0.00 46.80 1.98
2176 3611 1.600663 GCGTCTCCACGGACATATCTG 60.601 57.143 0.00 0.00 46.80 2.90
2177 3612 1.947456 CGTCTCCACGGACATATCTGA 59.053 52.381 0.00 0.00 42.73 3.27
2178 3613 2.287069 CGTCTCCACGGACATATCTGAC 60.287 54.545 0.00 0.00 42.73 3.51
2179 3614 2.688446 GTCTCCACGGACATATCTGACA 59.312 50.000 0.00 0.00 36.35 3.58
2180 3615 2.688446 TCTCCACGGACATATCTGACAC 59.312 50.000 0.00 0.00 34.98 3.67
2181 3616 2.690497 CTCCACGGACATATCTGACACT 59.310 50.000 0.00 0.00 34.98 3.55
2182 3617 2.427095 TCCACGGACATATCTGACACTG 59.573 50.000 0.00 0.00 34.98 3.66
2183 3618 2.196749 CACGGACATATCTGACACTGC 58.803 52.381 0.00 0.00 34.98 4.40
2184 3619 1.202302 ACGGACATATCTGACACTGCG 60.202 52.381 0.00 0.00 34.98 5.18
2185 3620 1.202302 CGGACATATCTGACACTGCGT 60.202 52.381 0.00 0.00 32.26 5.24
2186 3621 2.735444 CGGACATATCTGACACTGCGTT 60.735 50.000 0.00 0.00 32.26 4.84
2187 3622 2.860735 GGACATATCTGACACTGCGTTC 59.139 50.000 0.00 0.00 0.00 3.95
2188 3623 3.511699 GACATATCTGACACTGCGTTCA 58.488 45.455 0.00 0.00 0.00 3.18
2189 3624 3.925379 ACATATCTGACACTGCGTTCAA 58.075 40.909 0.00 0.00 0.00 2.69
2190 3625 3.679980 ACATATCTGACACTGCGTTCAAC 59.320 43.478 0.00 0.00 0.00 3.18
2191 3626 1.139989 ATCTGACACTGCGTTCAACG 58.860 50.000 5.28 5.28 45.88 4.10
2192 3627 0.101579 TCTGACACTGCGTTCAACGA 59.898 50.000 15.79 0.00 46.05 3.85
2193 3628 0.229753 CTGACACTGCGTTCAACGAC 59.770 55.000 15.79 5.73 46.05 4.34
2194 3629 0.458716 TGACACTGCGTTCAACGACA 60.459 50.000 15.79 10.39 46.05 4.35
2195 3630 0.648441 GACACTGCGTTCAACGACAA 59.352 50.000 15.79 0.00 46.05 3.18
2196 3631 1.061421 GACACTGCGTTCAACGACAAA 59.939 47.619 15.79 0.00 46.05 2.83
2197 3632 1.465387 ACACTGCGTTCAACGACAAAA 59.535 42.857 15.79 0.00 46.05 2.44
2198 3633 2.096819 ACACTGCGTTCAACGACAAAAT 59.903 40.909 15.79 0.00 46.05 1.82
2199 3634 3.105203 CACTGCGTTCAACGACAAAATT 58.895 40.909 15.79 0.00 46.05 1.82
2200 3635 3.061928 CACTGCGTTCAACGACAAAATTG 60.062 43.478 15.79 1.99 46.05 2.32
2201 3636 3.181505 ACTGCGTTCAACGACAAAATTGA 60.182 39.130 15.79 0.00 46.05 2.57
2202 3637 3.958704 TGCGTTCAACGACAAAATTGAT 58.041 36.364 15.79 0.00 46.05 2.57
2203 3638 3.728221 TGCGTTCAACGACAAAATTGATG 59.272 39.130 15.79 0.00 46.05 3.07
2204 3639 3.971871 GCGTTCAACGACAAAATTGATGA 59.028 39.130 15.79 0.00 46.05 2.92
2205 3640 4.616802 GCGTTCAACGACAAAATTGATGAT 59.383 37.500 15.79 0.00 46.05 2.45
2206 3641 5.792962 GCGTTCAACGACAAAATTGATGATA 59.207 36.000 15.79 0.00 46.05 2.15
2207 3642 6.236941 GCGTTCAACGACAAAATTGATGATAC 60.237 38.462 15.79 0.00 46.05 2.24
2208 3643 6.023333 CGTTCAACGACAAAATTGATGATACG 60.023 38.462 3.01 0.00 46.05 3.06
2209 3644 5.863898 TCAACGACAAAATTGATGATACGG 58.136 37.500 0.00 0.00 29.89 4.02
2210 3645 4.273005 ACGACAAAATTGATGATACGGC 57.727 40.909 0.00 0.00 0.00 5.68
2211 3646 3.064820 ACGACAAAATTGATGATACGGCC 59.935 43.478 0.00 0.00 0.00 6.13
2212 3647 3.617669 GACAAAATTGATGATACGGCCG 58.382 45.455 26.86 26.86 0.00 6.13
2213 3648 3.275143 ACAAAATTGATGATACGGCCGA 58.725 40.909 35.90 16.57 0.00 5.54
2214 3649 3.692101 ACAAAATTGATGATACGGCCGAA 59.308 39.130 35.90 14.64 0.00 4.30
2215 3650 3.963383 AAATTGATGATACGGCCGAAC 57.037 42.857 35.90 21.68 0.00 3.95
2216 3651 1.878953 ATTGATGATACGGCCGAACC 58.121 50.000 35.90 19.56 0.00 3.62
2217 3652 0.537653 TTGATGATACGGCCGAACCA 59.462 50.000 35.90 24.54 39.03 3.67
2218 3653 0.756294 TGATGATACGGCCGAACCAT 59.244 50.000 35.90 27.87 39.03 3.55
2219 3654 1.148310 GATGATACGGCCGAACCATG 58.852 55.000 35.90 0.00 39.03 3.66
2220 3655 0.756294 ATGATACGGCCGAACCATGA 59.244 50.000 35.90 13.52 39.03 3.07
2221 3656 0.537653 TGATACGGCCGAACCATGAA 59.462 50.000 35.90 5.55 39.03 2.57
2222 3657 1.217882 GATACGGCCGAACCATGAAG 58.782 55.000 35.90 0.00 39.03 3.02
2223 3658 0.539986 ATACGGCCGAACCATGAAGT 59.460 50.000 35.90 7.61 39.03 3.01
2224 3659 1.184431 TACGGCCGAACCATGAAGTA 58.816 50.000 35.90 6.39 39.03 2.24
2225 3660 0.322322 ACGGCCGAACCATGAAGTAA 59.678 50.000 35.90 0.00 39.03 2.24
2226 3661 1.270947 ACGGCCGAACCATGAAGTAAA 60.271 47.619 35.90 0.00 39.03 2.01
2227 3662 2.014128 CGGCCGAACCATGAAGTAAAT 58.986 47.619 24.07 0.00 39.03 1.40
2228 3663 2.422127 CGGCCGAACCATGAAGTAAATT 59.578 45.455 24.07 0.00 39.03 1.82
2229 3664 3.730662 CGGCCGAACCATGAAGTAAATTG 60.731 47.826 24.07 0.00 39.03 2.32
2230 3665 3.179048 GCCGAACCATGAAGTAAATTGC 58.821 45.455 0.00 0.00 0.00 3.56
2231 3666 3.366883 GCCGAACCATGAAGTAAATTGCA 60.367 43.478 0.00 0.00 0.00 4.08
2232 3667 4.804108 CCGAACCATGAAGTAAATTGCAA 58.196 39.130 0.00 0.00 0.00 4.08
2233 3668 5.226396 CCGAACCATGAAGTAAATTGCAAA 58.774 37.500 1.71 0.00 0.00 3.68
2234 3669 5.694006 CCGAACCATGAAGTAAATTGCAAAA 59.306 36.000 1.71 0.00 0.00 2.44
2235 3670 6.201806 CCGAACCATGAAGTAAATTGCAAAAA 59.798 34.615 1.71 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.325716 GGTTTCACCTCTAACCTACCACA 59.674 47.826 0.00 0.00 40.50 4.17
1 2 3.307269 GGGTTTCACCTCTAACCTACCAC 60.307 52.174 0.00 0.00 42.72 4.16
2 3 2.908351 GGGTTTCACCTCTAACCTACCA 59.092 50.000 0.00 0.00 42.72 3.25
80 83 4.074970 ACCAAAGAACTAGCCATGAACAG 58.925 43.478 0.00 0.00 0.00 3.16
123 126 2.565834 TGGGAGGAGTCCGTTAAAAGAG 59.434 50.000 2.76 0.00 45.05 2.85
126 129 2.640826 ACATGGGAGGAGTCCGTTAAAA 59.359 45.455 2.76 0.00 45.05 1.52
127 130 2.235402 GACATGGGAGGAGTCCGTTAAA 59.765 50.000 2.76 0.00 45.05 1.52
163 166 5.168569 TCGAAGGAGATGAAACATACACAC 58.831 41.667 0.00 0.00 0.00 3.82
184 187 3.674997 TGGACAAGAAAGGAGGAAATCG 58.325 45.455 0.00 0.00 0.00 3.34
189 192 3.494398 CGAACTTGGACAAGAAAGGAGGA 60.494 47.826 18.15 0.00 40.79 3.71
193 196 2.943033 ACACGAACTTGGACAAGAAAGG 59.057 45.455 18.15 7.19 40.79 3.11
194 197 4.142687 ACAACACGAACTTGGACAAGAAAG 60.143 41.667 18.15 10.38 40.79 2.62
204 207 5.236478 AGACAAGGAATACAACACGAACTTG 59.764 40.000 0.00 0.00 39.76 3.16
211 214 5.552178 AGAGGAAGACAAGGAATACAACAC 58.448 41.667 0.00 0.00 0.00 3.32
230 233 2.256117 ACACTCCGGTTGAAAAGAGG 57.744 50.000 12.06 0.00 0.00 3.69
267 270 7.781056 ACTTGAAAAAGGACATGAAAAGCTAA 58.219 30.769 0.00 0.00 0.00 3.09
269 272 6.225981 ACTTGAAAAAGGACATGAAAAGCT 57.774 33.333 0.00 0.00 0.00 3.74
272 275 9.277783 TGAAAAACTTGAAAAAGGACATGAAAA 57.722 25.926 0.00 0.00 0.00 2.29
277 280 9.317936 GAGATTGAAAAACTTGAAAAAGGACAT 57.682 29.630 0.00 0.00 0.00 3.06
319 322 2.158475 TGCTTCTTGACAAAGGGGTGAT 60.158 45.455 0.00 0.00 33.90 3.06
349 352 6.485648 CGGAAAAGAAAGAGGAAGAGGTTTAA 59.514 38.462 0.00 0.00 0.00 1.52
383 386 4.770531 TCCTCAACTTCCAAGAATCTCGTA 59.229 41.667 0.00 0.00 0.00 3.43
396 399 7.539022 GCAAATAAAAGTAAGCTCCTCAACTTC 59.461 37.037 0.00 0.00 31.15 3.01
480 483 5.046520 GGGAGTAGATTTCAGTGGTGTAGTT 60.047 44.000 0.00 0.00 0.00 2.24
581 1750 2.159310 CCTGTGGTCGTTTCTGCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
592 1950 1.600636 CACATTGGCCTGTGGTCGT 60.601 57.895 15.68 0.00 42.26 4.34
863 2272 4.503910 CGTATAAATATAGCTGGGCTGCA 58.496 43.478 0.50 0.00 40.10 4.41
877 2286 2.667199 GCGGGCCGGCGTATAAAT 60.667 61.111 29.48 0.00 0.00 1.40
878 2287 3.852307 AGCGGGCCGGCGTATAAA 61.852 61.111 29.48 0.00 38.18 1.40
902 2311 2.915659 TCGGCTCCGGTGTTGTCT 60.916 61.111 8.59 0.00 40.25 3.41
906 2315 4.379243 CTGCTCGGCTCCGGTGTT 62.379 66.667 8.59 0.00 40.25 3.32
926 2335 1.515088 CTGATTCGACGTGCGCTCT 60.515 57.895 9.73 0.00 40.61 4.09
927 2336 2.990735 CTGATTCGACGTGCGCTC 59.009 61.111 9.73 3.51 40.61 5.03
930 2339 2.792290 CTGGCTGATTCGACGTGCG 61.792 63.158 0.00 0.00 42.69 5.34
955 2364 4.490319 GCACACACGTATGTATATATGCGC 60.490 45.833 17.41 0.00 39.33 6.09
956 2365 4.258860 CGCACACACGTATGTATATATGCG 60.259 45.833 16.23 16.23 41.10 4.73
991 2400 3.402681 CCCCGACATCCTGCCTGT 61.403 66.667 0.00 0.00 0.00 4.00
1285 2694 1.857023 GATCGAAGATCGTGCGACGC 61.857 60.000 14.19 14.19 45.12 5.19
1289 2698 0.936764 CCCAGATCGAAGATCGTGCG 60.937 60.000 4.60 0.00 45.12 5.34
1296 2705 1.809869 CAGCGACCCAGATCGAAGA 59.190 57.895 0.00 0.00 45.13 2.87
1298 2707 1.960040 ATGCAGCGACCCAGATCGAA 61.960 55.000 0.00 0.00 45.13 3.71
1299 2708 1.960040 AATGCAGCGACCCAGATCGA 61.960 55.000 0.00 0.00 45.13 3.59
1300 2709 1.091771 AAATGCAGCGACCCAGATCG 61.092 55.000 0.00 0.00 45.09 3.69
1301 2710 0.379669 CAAATGCAGCGACCCAGATC 59.620 55.000 0.00 0.00 0.00 2.75
1302 2711 1.660560 GCAAATGCAGCGACCCAGAT 61.661 55.000 0.00 0.00 41.59 2.90
1303 2712 2.334946 GCAAATGCAGCGACCCAGA 61.335 57.895 0.00 0.00 41.59 3.86
1304 2713 2.180017 GCAAATGCAGCGACCCAG 59.820 61.111 0.00 0.00 41.59 4.45
1328 2737 0.984932 CGCTACACAAACACAACGCG 60.985 55.000 3.53 3.53 0.00 6.01
1337 2746 3.308595 CAGAACACAACTCGCTACACAAA 59.691 43.478 0.00 0.00 0.00 2.83
1395 2809 4.243039 TGCTAAGCAAACTGACAAGCAGT 61.243 43.478 0.00 0.00 46.82 4.40
1425 2839 5.053563 GTGTTTGCACGAACAGAAAATTC 57.946 39.130 4.20 0.00 39.97 2.17
1499 2913 1.330655 AATCCATCAGTCTCGCCCGT 61.331 55.000 0.00 0.00 0.00 5.28
1510 2924 3.199727 TCCATTTCCACTCGAATCCATCA 59.800 43.478 0.00 0.00 0.00 3.07
1514 2928 3.243201 GCATTCCATTTCCACTCGAATCC 60.243 47.826 0.00 0.00 0.00 3.01
1561 2996 2.843730 TCTTCCATAGTGGCCTTTGCTA 59.156 45.455 3.32 1.73 37.47 3.49
1582 3017 0.899720 CAATTCATTGGTGCCCAGCT 59.100 50.000 0.00 0.00 33.81 4.24
1601 3036 8.024285 CACGATAGGAGGATTCTACATTTCTAC 58.976 40.741 0.00 0.00 43.77 2.59
1622 3057 0.458543 CAGCTCGTTAGTGCCACGAT 60.459 55.000 0.00 0.00 45.26 3.73
1623 3058 1.080772 CAGCTCGTTAGTGCCACGA 60.081 57.895 0.00 0.00 44.25 4.35
1624 3059 2.094659 CCAGCTCGTTAGTGCCACG 61.095 63.158 0.00 0.00 37.57 4.94
1625 3060 1.004918 ACCAGCTCGTTAGTGCCAC 60.005 57.895 0.00 0.00 37.57 5.01
1626 3061 1.005037 CACCAGCTCGTTAGTGCCA 60.005 57.895 0.00 0.00 37.57 4.92
1627 3062 0.602905 AACACCAGCTCGTTAGTGCC 60.603 55.000 0.00 0.00 37.57 5.01
1628 3063 0.790814 GAACACCAGCTCGTTAGTGC 59.209 55.000 0.00 0.00 37.15 4.40
1629 3064 1.000955 AGGAACACCAGCTCGTTAGTG 59.999 52.381 0.00 0.00 36.30 2.74
1630 3065 1.000955 CAGGAACACCAGCTCGTTAGT 59.999 52.381 0.00 0.00 0.00 2.24
1631 3066 1.000955 ACAGGAACACCAGCTCGTTAG 59.999 52.381 0.00 0.00 0.00 2.34
1632 3067 1.000506 GACAGGAACACCAGCTCGTTA 59.999 52.381 0.00 0.00 0.00 3.18
1633 3068 0.249911 GACAGGAACACCAGCTCGTT 60.250 55.000 0.00 0.00 0.00 3.85
1634 3069 1.367840 GACAGGAACACCAGCTCGT 59.632 57.895 0.00 0.00 0.00 4.18
1635 3070 1.374758 GGACAGGAACACCAGCTCG 60.375 63.158 0.00 0.00 0.00 5.03
1636 3071 1.374758 CGGACAGGAACACCAGCTC 60.375 63.158 0.00 0.00 0.00 4.09
1637 3072 2.743718 CGGACAGGAACACCAGCT 59.256 61.111 0.00 0.00 0.00 4.24
1638 3073 2.358737 CCGGACAGGAACACCAGC 60.359 66.667 0.00 0.00 45.00 4.85
1639 3074 2.358737 GCCGGACAGGAACACCAG 60.359 66.667 5.05 0.00 45.00 4.00
1640 3075 3.164977 TGCCGGACAGGAACACCA 61.165 61.111 5.05 0.00 45.00 4.17
1644 3079 2.737376 GTCGTGCCGGACAGGAAC 60.737 66.667 18.39 11.49 44.32 3.62
1645 3080 4.351938 CGTCGTGCCGGACAGGAA 62.352 66.667 18.39 5.28 44.32 3.36
1689 3124 4.883354 CGCCATGAAGGAGCCCCC 62.883 72.222 0.00 0.00 41.22 5.40
1690 3125 3.125376 ATCGCCATGAAGGAGCCCC 62.125 63.158 0.00 0.00 41.22 5.80
1691 3126 1.599240 GATCGCCATGAAGGAGCCC 60.599 63.158 0.00 0.00 41.22 5.19
1692 3127 1.958205 CGATCGCCATGAAGGAGCC 60.958 63.158 0.26 0.00 41.22 4.70
1693 3128 1.958205 CCGATCGCCATGAAGGAGC 60.958 63.158 10.32 0.00 41.22 4.70
1694 3129 1.301244 CCCGATCGCCATGAAGGAG 60.301 63.158 10.32 0.00 41.22 3.69
1695 3130 2.821685 CCCGATCGCCATGAAGGA 59.178 61.111 10.32 0.00 41.22 3.36
1696 3131 2.974698 GCCCGATCGCCATGAAGG 60.975 66.667 10.32 4.68 41.84 3.46
1697 3132 3.341043 CGCCCGATCGCCATGAAG 61.341 66.667 10.32 0.00 0.00 3.02
1698 3133 4.155733 ACGCCCGATCGCCATGAA 62.156 61.111 10.32 0.00 0.00 2.57
1699 3134 4.889856 CACGCCCGATCGCCATGA 62.890 66.667 10.32 0.00 0.00 3.07
1705 3140 4.143333 ACTTCCCACGCCCGATCG 62.143 66.667 8.51 8.51 0.00 3.69
1706 3141 2.511600 CACTTCCCACGCCCGATC 60.512 66.667 0.00 0.00 0.00 3.69
1707 3142 4.778143 GCACTTCCCACGCCCGAT 62.778 66.667 0.00 0.00 0.00 4.18
1712 3147 4.980805 TCACCGCACTTCCCACGC 62.981 66.667 0.00 0.00 0.00 5.34
1713 3148 2.047274 ATCACCGCACTTCCCACG 60.047 61.111 0.00 0.00 0.00 4.94
1714 3149 1.298859 GACATCACCGCACTTCCCAC 61.299 60.000 0.00 0.00 0.00 4.61
1715 3150 1.003839 GACATCACCGCACTTCCCA 60.004 57.895 0.00 0.00 0.00 4.37
1716 3151 2.100631 CGACATCACCGCACTTCCC 61.101 63.158 0.00 0.00 0.00 3.97
1717 3152 1.374252 ACGACATCACCGCACTTCC 60.374 57.895 0.00 0.00 0.00 3.46
1718 3153 1.626654 CCACGACATCACCGCACTTC 61.627 60.000 0.00 0.00 0.00 3.01
1719 3154 1.667830 CCACGACATCACCGCACTT 60.668 57.895 0.00 0.00 0.00 3.16
1720 3155 2.048222 CCACGACATCACCGCACT 60.048 61.111 0.00 0.00 0.00 4.40
1721 3156 2.048597 TCCACGACATCACCGCAC 60.049 61.111 0.00 0.00 0.00 5.34
1722 3157 2.048597 GTCCACGACATCACCGCA 60.049 61.111 0.00 0.00 32.09 5.69
1723 3158 3.179265 CGTCCACGACATCACCGC 61.179 66.667 0.00 0.00 43.02 5.68
1724 3159 1.800315 GACGTCCACGACATCACCG 60.800 63.158 3.51 0.00 43.02 4.94
1725 3160 1.800315 CGACGTCCACGACATCACC 60.800 63.158 10.58 0.00 43.02 4.02
1726 3161 1.081641 ACGACGTCCACGACATCAC 60.082 57.895 10.58 0.00 43.02 3.06
1727 3162 1.081708 CACGACGTCCACGACATCA 60.082 57.895 10.58 0.00 43.02 3.07
1728 3163 1.800315 CCACGACGTCCACGACATC 60.800 63.158 10.58 0.00 43.02 3.06
1729 3164 2.079020 AACCACGACGTCCACGACAT 62.079 55.000 10.58 0.00 43.02 3.06
1730 3165 2.773745 AACCACGACGTCCACGACA 61.774 57.895 10.58 0.00 43.02 4.35
1731 3166 2.026590 AACCACGACGTCCACGAC 59.973 61.111 10.58 0.00 43.02 4.34
1732 3167 2.026445 CAACCACGACGTCCACGA 59.974 61.111 10.58 0.00 43.02 4.35
1733 3168 3.698463 GCAACCACGACGTCCACG 61.698 66.667 10.58 1.10 46.33 4.94
1734 3169 3.343421 GGCAACCACGACGTCCAC 61.343 66.667 10.58 0.00 0.00 4.02
1735 3170 4.953868 CGGCAACCACGACGTCCA 62.954 66.667 10.58 0.00 0.00 4.02
1737 3172 4.651008 TCCGGCAACCACGACGTC 62.651 66.667 5.18 5.18 0.00 4.34
1738 3173 4.657824 CTCCGGCAACCACGACGT 62.658 66.667 0.00 0.00 0.00 4.34
1740 3175 3.934391 CTCCTCCGGCAACCACGAC 62.934 68.421 0.00 0.00 0.00 4.34
1741 3176 3.691342 CTCCTCCGGCAACCACGA 61.691 66.667 0.00 0.00 0.00 4.35
1757 3192 2.038975 TCAAGTAGGAGCCCCGCT 59.961 61.111 0.00 0.00 43.88 5.52
1758 3193 2.187163 GTCAAGTAGGAGCCCCGC 59.813 66.667 0.00 0.00 37.58 6.13
1759 3194 2.348888 ACGTCAAGTAGGAGCCCCG 61.349 63.158 0.00 0.00 37.58 5.73
1760 3195 1.218316 CACGTCAAGTAGGAGCCCC 59.782 63.158 0.00 0.00 0.00 5.80
1761 3196 1.218316 CCACGTCAAGTAGGAGCCC 59.782 63.158 0.00 0.00 0.00 5.19
1762 3197 1.135170 GTACCACGTCAAGTAGGAGCC 60.135 57.143 0.00 0.00 0.00 4.70
1763 3198 1.467035 CGTACCACGTCAAGTAGGAGC 60.467 57.143 0.00 0.00 36.74 4.70
1764 3199 1.131883 CCGTACCACGTCAAGTAGGAG 59.868 57.143 9.86 0.43 40.58 3.69
1765 3200 1.167851 CCGTACCACGTCAAGTAGGA 58.832 55.000 9.86 0.00 40.58 2.94
1766 3201 0.883833 ACCGTACCACGTCAAGTAGG 59.116 55.000 0.00 0.00 40.58 3.18
1767 3202 1.401931 CCACCGTACCACGTCAAGTAG 60.402 57.143 0.00 0.00 40.58 2.57
1768 3203 0.597568 CCACCGTACCACGTCAAGTA 59.402 55.000 0.00 0.00 40.58 2.24
1769 3204 1.364901 CCACCGTACCACGTCAAGT 59.635 57.895 0.00 0.00 40.58 3.16
1770 3205 0.597568 TACCACCGTACCACGTCAAG 59.402 55.000 0.00 0.00 40.58 3.02
1771 3206 0.597568 CTACCACCGTACCACGTCAA 59.402 55.000 0.00 0.00 40.58 3.18
1772 3207 0.537143 ACTACCACCGTACCACGTCA 60.537 55.000 0.00 0.00 40.58 4.35
1773 3208 0.109597 CACTACCACCGTACCACGTC 60.110 60.000 0.00 0.00 40.58 4.34
1774 3209 0.537143 TCACTACCACCGTACCACGT 60.537 55.000 0.00 0.00 40.58 4.49
1775 3210 0.169672 CTCACTACCACCGTACCACG 59.830 60.000 0.00 0.00 42.11 4.94
1776 3211 0.529378 CCTCACTACCACCGTACCAC 59.471 60.000 0.00 0.00 0.00 4.16
1777 3212 0.405198 TCCTCACTACCACCGTACCA 59.595 55.000 0.00 0.00 0.00 3.25
1778 3213 1.101331 CTCCTCACTACCACCGTACC 58.899 60.000 0.00 0.00 0.00 3.34
1779 3214 1.742268 GTCTCCTCACTACCACCGTAC 59.258 57.143 0.00 0.00 0.00 3.67
1780 3215 1.676916 CGTCTCCTCACTACCACCGTA 60.677 57.143 0.00 0.00 0.00 4.02
1781 3216 0.959372 CGTCTCCTCACTACCACCGT 60.959 60.000 0.00 0.00 0.00 4.83
1782 3217 0.675837 TCGTCTCCTCACTACCACCG 60.676 60.000 0.00 0.00 0.00 4.94
1783 3218 0.810016 GTCGTCTCCTCACTACCACC 59.190 60.000 0.00 0.00 0.00 4.61
1784 3219 0.810016 GGTCGTCTCCTCACTACCAC 59.190 60.000 0.00 0.00 33.27 4.16
1785 3220 0.675837 CGGTCGTCTCCTCACTACCA 60.676 60.000 0.00 0.00 32.71 3.25
1786 3221 0.676151 ACGGTCGTCTCCTCACTACC 60.676 60.000 0.00 0.00 0.00 3.18
1787 3222 0.447011 CACGGTCGTCTCCTCACTAC 59.553 60.000 0.00 0.00 0.00 2.73
1788 3223 0.675837 CCACGGTCGTCTCCTCACTA 60.676 60.000 0.00 0.00 0.00 2.74
1789 3224 1.972223 CCACGGTCGTCTCCTCACT 60.972 63.158 0.00 0.00 0.00 3.41
1790 3225 2.567049 CCACGGTCGTCTCCTCAC 59.433 66.667 0.00 0.00 0.00 3.51
1791 3226 3.371063 GCCACGGTCGTCTCCTCA 61.371 66.667 0.00 0.00 0.00 3.86
1792 3227 3.053849 GAGCCACGGTCGTCTCCTC 62.054 68.421 0.00 0.00 0.00 3.71
1793 3228 3.063084 GAGCCACGGTCGTCTCCT 61.063 66.667 0.00 0.00 0.00 3.69
1794 3229 4.131088 GGAGCCACGGTCGTCTCC 62.131 72.222 13.08 13.08 38.40 3.71
1795 3230 3.053849 GAGGAGCCACGGTCGTCTC 62.054 68.421 6.35 0.00 40.36 3.36
1796 3231 3.063084 GAGGAGCCACGGTCGTCT 61.063 66.667 6.35 0.00 40.36 4.18
1797 3232 4.131088 GGAGGAGCCACGGTCGTC 62.131 72.222 5.26 5.26 41.99 4.20
1798 3233 4.680537 AGGAGGAGCCACGGTCGT 62.681 66.667 0.00 0.00 40.02 4.34
1799 3234 3.358076 GAAGGAGGAGCCACGGTCG 62.358 68.421 0.00 0.00 40.02 4.79
1800 3235 2.283529 TGAAGGAGGAGCCACGGTC 61.284 63.158 0.00 0.00 40.02 4.79
1801 3236 2.203788 TGAAGGAGGAGCCACGGT 60.204 61.111 0.00 0.00 40.02 4.83
1802 3237 2.266055 GTGAAGGAGGAGCCACGG 59.734 66.667 0.00 0.00 40.02 4.94
1803 3238 2.125912 CGTGAAGGAGGAGCCACG 60.126 66.667 0.00 0.00 44.66 4.94
1804 3239 1.374758 CACGTGAAGGAGGAGCCAC 60.375 63.158 10.90 0.00 40.02 5.01
1805 3240 1.837051 ACACGTGAAGGAGGAGCCA 60.837 57.895 25.01 0.00 40.02 4.75
1806 3241 1.374758 CACACGTGAAGGAGGAGCC 60.375 63.158 25.01 0.00 0.00 4.70
1807 3242 1.374758 CCACACGTGAAGGAGGAGC 60.375 63.158 25.01 0.00 0.00 4.70
1808 3243 0.244994 CTCCACACGTGAAGGAGGAG 59.755 60.000 34.15 27.82 44.10 3.69
1809 3244 2.351777 CTCCACACGTGAAGGAGGA 58.648 57.895 34.15 24.66 44.10 3.71
1810 3245 4.996976 CTCCACACGTGAAGGAGG 57.003 61.111 34.15 23.29 44.10 4.30
1812 3247 1.816863 GCCTCTCCACACGTGAAGGA 61.817 60.000 25.01 25.13 30.92 3.36
1813 3248 1.374758 GCCTCTCCACACGTGAAGG 60.375 63.158 25.01 22.39 0.00 3.46
1814 3249 1.734477 CGCCTCTCCACACGTGAAG 60.734 63.158 25.01 15.86 0.00 3.02
1815 3250 2.338620 CGCCTCTCCACACGTGAA 59.661 61.111 25.01 6.21 0.00 3.18
1816 3251 3.680786 CCGCCTCTCCACACGTGA 61.681 66.667 25.01 0.00 0.00 4.35
1820 3255 4.803426 CTCGCCGCCTCTCCACAC 62.803 72.222 0.00 0.00 0.00 3.82
1853 3288 3.827898 GGAGCTCCTCCGTGACCG 61.828 72.222 26.25 0.00 41.08 4.79
1861 3296 2.267324 GCACACCTGGAGCTCCTC 59.733 66.667 32.28 8.73 36.82 3.71
1862 3297 2.203907 AGCACACCTGGAGCTCCT 60.204 61.111 32.28 10.99 32.05 3.69
1863 3298 2.046507 CAGCACACCTGGAGCTCC 60.047 66.667 26.78 26.78 37.93 4.70
1864 3299 2.745492 GCAGCACACCTGGAGCTC 60.745 66.667 4.71 4.71 42.03 4.09
1865 3300 4.694233 CGCAGCACACCTGGAGCT 62.694 66.667 0.00 3.82 42.03 4.09
1866 3301 3.589654 TACGCAGCACACCTGGAGC 62.590 63.158 0.00 1.17 42.03 4.70
1867 3302 1.738099 GTACGCAGCACACCTGGAG 60.738 63.158 0.00 0.00 42.03 3.86
1868 3303 2.154798 GAGTACGCAGCACACCTGGA 62.155 60.000 0.00 0.00 42.03 3.86
1869 3304 1.738099 GAGTACGCAGCACACCTGG 60.738 63.158 0.00 0.00 42.03 4.45
1870 3305 2.088763 CGAGTACGCAGCACACCTG 61.089 63.158 0.00 0.00 44.67 4.00
1871 3306 2.258591 CGAGTACGCAGCACACCT 59.741 61.111 0.00 0.00 0.00 4.00
1881 3316 0.377554 AAGACGGATGAGCGAGTACG 59.622 55.000 0.00 0.00 42.93 3.67
1882 3317 1.595003 CGAAGACGGATGAGCGAGTAC 60.595 57.143 0.00 0.00 35.72 2.73
1883 3318 0.656259 CGAAGACGGATGAGCGAGTA 59.344 55.000 0.00 0.00 35.72 2.59
1884 3319 1.306642 ACGAAGACGGATGAGCGAGT 61.307 55.000 0.00 0.00 44.46 4.18
1885 3320 0.863538 CACGAAGACGGATGAGCGAG 60.864 60.000 0.00 0.00 44.46 5.03
1886 3321 1.136774 CACGAAGACGGATGAGCGA 59.863 57.895 0.00 0.00 44.46 4.93
1887 3322 0.863538 CTCACGAAGACGGATGAGCG 60.864 60.000 0.00 0.00 44.46 5.03
1888 3323 0.526524 CCTCACGAAGACGGATGAGC 60.527 60.000 0.00 0.00 44.46 4.26
1889 3324 1.064803 CTCCTCACGAAGACGGATGAG 59.935 57.143 0.00 0.00 44.46 2.90
1890 3325 1.095600 CTCCTCACGAAGACGGATGA 58.904 55.000 0.00 0.00 44.46 2.92
1891 3326 0.101399 CCTCCTCACGAAGACGGATG 59.899 60.000 0.00 0.00 44.46 3.51
1892 3327 0.323542 ACCTCCTCACGAAGACGGAT 60.324 55.000 0.00 0.00 44.46 4.18
1893 3328 1.074423 ACCTCCTCACGAAGACGGA 59.926 57.895 0.00 0.00 44.46 4.69
1894 3329 1.213013 CACCTCCTCACGAAGACGG 59.787 63.158 0.00 0.00 44.46 4.79
1895 3330 1.444553 GCACCTCCTCACGAAGACG 60.445 63.158 0.00 0.00 45.75 4.18
1896 3331 1.444553 CGCACCTCCTCACGAAGAC 60.445 63.158 0.00 0.00 0.00 3.01
1897 3332 2.636412 CCGCACCTCCTCACGAAGA 61.636 63.158 0.00 0.00 0.00 2.87
1898 3333 2.125912 CCGCACCTCCTCACGAAG 60.126 66.667 0.00 0.00 0.00 3.79
1899 3334 2.504274 AACCGCACCTCCTCACGAA 61.504 57.895 0.00 0.00 0.00 3.85
1900 3335 2.915659 AACCGCACCTCCTCACGA 60.916 61.111 0.00 0.00 0.00 4.35
1901 3336 2.738521 CAACCGCACCTCCTCACG 60.739 66.667 0.00 0.00 0.00 4.35
1902 3337 1.961277 CACAACCGCACCTCCTCAC 60.961 63.158 0.00 0.00 0.00 3.51
1903 3338 2.377628 GACACAACCGCACCTCCTCA 62.378 60.000 0.00 0.00 0.00 3.86
1904 3339 1.668151 GACACAACCGCACCTCCTC 60.668 63.158 0.00 0.00 0.00 3.71
1905 3340 2.426023 GACACAACCGCACCTCCT 59.574 61.111 0.00 0.00 0.00 3.69
1906 3341 2.668550 GGACACAACCGCACCTCC 60.669 66.667 0.00 0.00 0.00 4.30
1907 3342 1.668151 GAGGACACAACCGCACCTC 60.668 63.158 0.00 0.00 39.90 3.85
1908 3343 1.768684 ATGAGGACACAACCGCACCT 61.769 55.000 0.00 0.00 41.93 4.00
1909 3344 0.036765 TATGAGGACACAACCGCACC 60.037 55.000 0.00 0.00 41.93 5.01
1910 3345 1.337823 ACTATGAGGACACAACCGCAC 60.338 52.381 0.00 0.00 41.93 5.34
1911 3346 0.973632 ACTATGAGGACACAACCGCA 59.026 50.000 0.00 0.00 43.13 5.69
1912 3347 1.641577 GACTATGAGGACACAACCGC 58.358 55.000 0.00 0.00 34.73 5.68
1913 3348 1.469251 CCGACTATGAGGACACAACCG 60.469 57.143 0.00 0.00 34.73 4.44
1914 3349 1.822990 TCCGACTATGAGGACACAACC 59.177 52.381 0.00 0.00 0.00 3.77
1915 3350 3.152261 CTCCGACTATGAGGACACAAC 57.848 52.381 0.00 0.00 32.33 3.32
1923 3358 1.606668 GTGCTCTCCTCCGACTATGAG 59.393 57.143 0.00 0.00 0.00 2.90
1924 3359 1.681538 GTGCTCTCCTCCGACTATGA 58.318 55.000 0.00 0.00 0.00 2.15
1925 3360 0.309302 CGTGCTCTCCTCCGACTATG 59.691 60.000 0.00 0.00 0.00 2.23
1926 3361 0.180642 TCGTGCTCTCCTCCGACTAT 59.819 55.000 0.00 0.00 0.00 2.12
1927 3362 0.743701 GTCGTGCTCTCCTCCGACTA 60.744 60.000 0.00 0.00 44.55 2.59
1928 3363 2.041686 GTCGTGCTCTCCTCCGACT 61.042 63.158 0.00 0.00 44.55 4.18
1929 3364 2.486042 GTCGTGCTCTCCTCCGAC 59.514 66.667 0.00 0.00 42.22 4.79
1930 3365 2.750637 GGTCGTGCTCTCCTCCGA 60.751 66.667 0.00 0.00 0.00 4.55
1931 3366 2.752238 AGGTCGTGCTCTCCTCCG 60.752 66.667 0.00 0.00 0.00 4.63
1932 3367 3.202467 GAGGTCGTGCTCTCCTCC 58.798 66.667 12.70 0.00 41.09 4.30
1933 3368 3.202467 GGAGGTCGTGCTCTCCTC 58.798 66.667 14.38 14.38 44.54 3.71
1936 3371 0.968393 AAGGAGGAGGTCGTGCTCTC 60.968 60.000 12.92 4.70 43.16 3.20
1937 3372 1.077625 AAGGAGGAGGTCGTGCTCT 59.922 57.895 12.92 0.00 43.16 4.09
1938 3373 1.216710 CAAGGAGGAGGTCGTGCTC 59.783 63.158 5.56 5.56 42.88 4.26
1939 3374 1.534235 ACAAGGAGGAGGTCGTGCT 60.534 57.895 0.00 0.00 33.90 4.40
1940 3375 1.079750 GACAAGGAGGAGGTCGTGC 60.080 63.158 0.00 0.00 0.00 5.34
1941 3376 0.244994 CAGACAAGGAGGAGGTCGTG 59.755 60.000 0.00 0.00 36.68 4.35
1942 3377 0.178958 ACAGACAAGGAGGAGGTCGT 60.179 55.000 0.00 0.00 36.68 4.34
1943 3378 0.528470 GACAGACAAGGAGGAGGTCG 59.472 60.000 0.00 0.00 36.68 4.79
1944 3379 1.633774 TGACAGACAAGGAGGAGGTC 58.366 55.000 0.00 0.00 0.00 3.85
1945 3380 1.905215 CATGACAGACAAGGAGGAGGT 59.095 52.381 0.00 0.00 0.00 3.85
1946 3381 2.093764 GTCATGACAGACAAGGAGGAGG 60.094 54.545 21.07 0.00 38.40 4.30
1947 3382 2.416566 CGTCATGACAGACAAGGAGGAG 60.417 54.545 24.93 0.63 38.43 3.69
1948 3383 1.546029 CGTCATGACAGACAAGGAGGA 59.454 52.381 24.93 0.00 38.43 3.71
1949 3384 1.404717 CCGTCATGACAGACAAGGAGG 60.405 57.143 24.93 10.93 38.43 4.30
1950 3385 2.001812 CCGTCATGACAGACAAGGAG 57.998 55.000 24.93 5.71 38.43 3.69
1951 3386 0.037326 GCCGTCATGACAGACAAGGA 60.037 55.000 24.93 0.00 38.43 3.36
1952 3387 1.354337 CGCCGTCATGACAGACAAGG 61.354 60.000 24.93 16.97 38.43 3.61
1953 3388 1.354337 CCGCCGTCATGACAGACAAG 61.354 60.000 24.93 7.83 38.43 3.16
1954 3389 1.374125 CCGCCGTCATGACAGACAA 60.374 57.895 24.93 0.00 38.43 3.18
1955 3390 2.212900 CTCCGCCGTCATGACAGACA 62.213 60.000 24.93 4.24 38.43 3.41
1956 3391 1.517257 CTCCGCCGTCATGACAGAC 60.517 63.158 24.93 12.36 35.19 3.51
1957 3392 2.710902 CCTCCGCCGTCATGACAGA 61.711 63.158 24.93 14.06 0.00 3.41
1958 3393 2.202797 CCTCCGCCGTCATGACAG 60.203 66.667 24.93 15.48 0.00 3.51
1959 3394 2.678580 TCCTCCGCCGTCATGACA 60.679 61.111 24.93 4.69 0.00 3.58
1960 3395 2.105128 CTCCTCCGCCGTCATGAC 59.895 66.667 16.21 16.21 0.00 3.06
1961 3396 3.147595 CCTCCTCCGCCGTCATGA 61.148 66.667 0.00 0.00 0.00 3.07
1962 3397 3.147595 TCCTCCTCCGCCGTCATG 61.148 66.667 0.00 0.00 0.00 3.07
1963 3398 3.148279 GTCCTCCTCCGCCGTCAT 61.148 66.667 0.00 0.00 0.00 3.06
1972 3407 4.779733 TCCTGGGCCGTCCTCCTC 62.780 72.222 0.00 0.00 36.20 3.71
1973 3408 4.787280 CTCCTGGGCCGTCCTCCT 62.787 72.222 0.00 0.00 36.20 3.69
1991 3426 2.104331 AGGATAGTCGCGTTGCCG 59.896 61.111 5.77 0.00 37.07 5.69
1992 3427 2.526120 GCAGGATAGTCGCGTTGCC 61.526 63.158 5.77 1.90 0.00 4.52
1993 3428 2.526120 GGCAGGATAGTCGCGTTGC 61.526 63.158 5.77 6.10 0.00 4.17
1994 3429 2.230940 CGGCAGGATAGTCGCGTTG 61.231 63.158 5.77 0.00 0.00 4.10
1995 3430 2.104331 CGGCAGGATAGTCGCGTT 59.896 61.111 5.77 0.00 0.00 4.84
1996 3431 2.827190 TCGGCAGGATAGTCGCGT 60.827 61.111 5.77 0.00 36.38 6.01
1997 3432 2.050895 CTCGGCAGGATAGTCGCG 60.051 66.667 0.00 0.00 36.38 5.87
1998 3433 1.284408 CTCTCGGCAGGATAGTCGC 59.716 63.158 0.00 0.00 36.38 5.19
1999 3434 1.025812 AACTCTCGGCAGGATAGTCG 58.974 55.000 0.00 0.00 38.11 4.18
2000 3435 1.067821 CCAACTCTCGGCAGGATAGTC 59.932 57.143 0.00 0.00 31.45 2.59
2001 3436 1.115467 CCAACTCTCGGCAGGATAGT 58.885 55.000 0.00 0.00 33.86 2.12
2002 3437 0.390860 CCCAACTCTCGGCAGGATAG 59.609 60.000 0.00 0.00 0.00 2.08
2003 3438 0.032515 TCCCAACTCTCGGCAGGATA 60.033 55.000 0.00 0.00 0.00 2.59
2004 3439 1.306141 TCCCAACTCTCGGCAGGAT 60.306 57.895 0.00 0.00 0.00 3.24
2005 3440 1.984570 CTCCCAACTCTCGGCAGGA 60.985 63.158 0.00 0.00 0.00 3.86
2006 3441 1.954362 CTCTCCCAACTCTCGGCAGG 61.954 65.000 0.00 0.00 0.00 4.85
2007 3442 0.967887 TCTCTCCCAACTCTCGGCAG 60.968 60.000 0.00 0.00 0.00 4.85
2008 3443 0.541998 TTCTCTCCCAACTCTCGGCA 60.542 55.000 0.00 0.00 0.00 5.69
2009 3444 0.827368 ATTCTCTCCCAACTCTCGGC 59.173 55.000 0.00 0.00 0.00 5.54
2010 3445 1.827969 ACATTCTCTCCCAACTCTCGG 59.172 52.381 0.00 0.00 0.00 4.63
2011 3446 2.886081 CACATTCTCTCCCAACTCTCG 58.114 52.381 0.00 0.00 0.00 4.04
2012 3447 2.626840 GCACATTCTCTCCCAACTCTC 58.373 52.381 0.00 0.00 0.00 3.20
2013 3448 1.066573 CGCACATTCTCTCCCAACTCT 60.067 52.381 0.00 0.00 0.00 3.24
2014 3449 1.363744 CGCACATTCTCTCCCAACTC 58.636 55.000 0.00 0.00 0.00 3.01
2015 3450 0.036010 CCGCACATTCTCTCCCAACT 60.036 55.000 0.00 0.00 0.00 3.16
2016 3451 1.648467 GCCGCACATTCTCTCCCAAC 61.648 60.000 0.00 0.00 0.00 3.77
2017 3452 1.377202 GCCGCACATTCTCTCCCAA 60.377 57.895 0.00 0.00 0.00 4.12
2018 3453 2.268920 GCCGCACATTCTCTCCCA 59.731 61.111 0.00 0.00 0.00 4.37
2019 3454 2.650813 ATCGCCGCACATTCTCTCCC 62.651 60.000 0.00 0.00 0.00 4.30
2020 3455 1.227380 ATCGCCGCACATTCTCTCC 60.227 57.895 0.00 0.00 0.00 3.71
2021 3456 0.528466 TCATCGCCGCACATTCTCTC 60.528 55.000 0.00 0.00 0.00 3.20
2022 3457 0.529337 CTCATCGCCGCACATTCTCT 60.529 55.000 0.00 0.00 0.00 3.10
2023 3458 0.807667 ACTCATCGCCGCACATTCTC 60.808 55.000 0.00 0.00 0.00 2.87
2024 3459 0.391661 AACTCATCGCCGCACATTCT 60.392 50.000 0.00 0.00 0.00 2.40
2025 3460 0.026803 GAACTCATCGCCGCACATTC 59.973 55.000 0.00 0.00 0.00 2.67
2026 3461 0.673333 TGAACTCATCGCCGCACATT 60.673 50.000 0.00 0.00 0.00 2.71
2027 3462 1.079197 TGAACTCATCGCCGCACAT 60.079 52.632 0.00 0.00 0.00 3.21
2028 3463 1.737735 CTGAACTCATCGCCGCACA 60.738 57.895 0.00 0.00 0.00 4.57
2029 3464 2.456119 CCTGAACTCATCGCCGCAC 61.456 63.158 0.00 0.00 0.00 5.34
2030 3465 2.125552 CCTGAACTCATCGCCGCA 60.126 61.111 0.00 0.00 0.00 5.69
2031 3466 2.125512 ACCTGAACTCATCGCCGC 60.126 61.111 0.00 0.00 0.00 6.53
2032 3467 1.811266 CCACCTGAACTCATCGCCG 60.811 63.158 0.00 0.00 0.00 6.46
2033 3468 1.450312 CCCACCTGAACTCATCGCC 60.450 63.158 0.00 0.00 0.00 5.54
2034 3469 0.741221 GTCCCACCTGAACTCATCGC 60.741 60.000 0.00 0.00 0.00 4.58
2035 3470 0.108138 GGTCCCACCTGAACTCATCG 60.108 60.000 0.00 0.00 34.73 3.84
2036 3471 0.984230 TGGTCCCACCTGAACTCATC 59.016 55.000 0.00 0.00 39.58 2.92
2037 3472 1.283029 CATGGTCCCACCTGAACTCAT 59.717 52.381 0.00 0.00 39.58 2.90
2038 3473 0.692476 CATGGTCCCACCTGAACTCA 59.308 55.000 0.00 0.00 39.58 3.41
2039 3474 0.984230 TCATGGTCCCACCTGAACTC 59.016 55.000 0.00 0.00 39.58 3.01
2040 3475 1.073923 GTTCATGGTCCCACCTGAACT 59.926 52.381 18.88 0.00 44.14 3.01
2041 3476 1.534729 GTTCATGGTCCCACCTGAAC 58.465 55.000 13.98 13.98 42.83 3.18
2042 3477 0.404040 GGTTCATGGTCCCACCTGAA 59.596 55.000 0.00 0.00 39.58 3.02
2043 3478 0.770166 TGGTTCATGGTCCCACCTGA 60.770 55.000 0.00 0.00 39.58 3.86
2044 3479 0.609131 GTGGTTCATGGTCCCACCTG 60.609 60.000 14.70 0.00 42.27 4.00
2045 3480 1.767692 GTGGTTCATGGTCCCACCT 59.232 57.895 14.70 0.00 42.27 4.00
2046 3481 1.674322 CGTGGTTCATGGTCCCACC 60.674 63.158 17.90 7.52 44.66 4.61
2047 3482 0.322322 TACGTGGTTCATGGTCCCAC 59.678 55.000 15.31 15.31 44.16 4.61
2048 3483 0.611200 CTACGTGGTTCATGGTCCCA 59.389 55.000 0.00 0.00 0.00 4.37
2049 3484 0.611714 ACTACGTGGTTCATGGTCCC 59.388 55.000 0.00 0.00 0.00 4.46
2050 3485 1.549170 AGACTACGTGGTTCATGGTCC 59.451 52.381 5.86 0.00 0.00 4.46
2051 3486 2.607187 CAGACTACGTGGTTCATGGTC 58.393 52.381 5.86 0.00 0.00 4.02
2052 3487 1.275291 CCAGACTACGTGGTTCATGGT 59.725 52.381 17.94 0.00 0.00 3.55
2053 3488 2.007049 GCCAGACTACGTGGTTCATGG 61.007 57.143 20.39 20.39 37.40 3.66
2054 3489 1.337728 TGCCAGACTACGTGGTTCATG 60.338 52.381 5.86 5.99 37.40 3.07
2055 3490 0.973632 TGCCAGACTACGTGGTTCAT 59.026 50.000 5.86 0.00 37.40 2.57
2056 3491 0.032952 GTGCCAGACTACGTGGTTCA 59.967 55.000 5.86 0.00 37.40 3.18
2057 3492 0.032952 TGTGCCAGACTACGTGGTTC 59.967 55.000 5.86 0.00 37.40 3.62
2058 3493 0.685097 ATGTGCCAGACTACGTGGTT 59.315 50.000 5.86 0.00 37.40 3.67
2059 3494 1.552578 TATGTGCCAGACTACGTGGT 58.447 50.000 3.40 3.40 37.40 4.16
2060 3495 2.890808 ATATGTGCCAGACTACGTGG 57.109 50.000 0.00 0.00 38.21 4.94
2061 3496 4.301637 TGTATATGTGCCAGACTACGTG 57.698 45.455 0.00 0.00 0.00 4.49
2062 3497 4.262036 CCATGTATATGTGCCAGACTACGT 60.262 45.833 0.00 0.00 32.21 3.57
2063 3498 4.022329 TCCATGTATATGTGCCAGACTACG 60.022 45.833 0.00 0.00 32.21 3.51
2064 3499 5.468540 TCCATGTATATGTGCCAGACTAC 57.531 43.478 0.00 0.00 32.21 2.73
2065 3500 5.602561 AGTTCCATGTATATGTGCCAGACTA 59.397 40.000 0.00 0.00 32.21 2.59
2066 3501 4.410228 AGTTCCATGTATATGTGCCAGACT 59.590 41.667 0.00 0.00 32.21 3.24
2067 3502 4.708177 AGTTCCATGTATATGTGCCAGAC 58.292 43.478 0.00 0.00 32.21 3.51
2068 3503 5.602561 ACTAGTTCCATGTATATGTGCCAGA 59.397 40.000 0.00 0.00 32.21 3.86
2069 3504 5.858381 ACTAGTTCCATGTATATGTGCCAG 58.142 41.667 0.00 0.00 32.21 4.85
2070 3505 5.221641 GGACTAGTTCCATGTATATGTGCCA 60.222 44.000 0.00 0.00 45.10 4.92
2071 3506 5.238583 GGACTAGTTCCATGTATATGTGCC 58.761 45.833 0.00 0.00 45.10 5.01
2084 3519 3.981211 TGTACACGTTTGGACTAGTTCC 58.019 45.455 0.00 1.65 46.13 3.62
2085 3520 5.277011 GGTTTGTACACGTTTGGACTAGTTC 60.277 44.000 0.00 0.00 37.48 3.01
2086 3521 4.571984 GGTTTGTACACGTTTGGACTAGTT 59.428 41.667 0.00 0.00 37.48 2.24
2087 3522 4.122046 GGTTTGTACACGTTTGGACTAGT 58.878 43.478 0.00 0.00 37.48 2.57
2088 3523 4.374399 AGGTTTGTACACGTTTGGACTAG 58.626 43.478 0.00 0.00 37.48 2.57
2089 3524 4.370917 GAGGTTTGTACACGTTTGGACTA 58.629 43.478 0.00 0.00 37.48 2.59
2090 3525 3.200483 GAGGTTTGTACACGTTTGGACT 58.800 45.455 0.00 0.00 37.48 3.85
2091 3526 2.033492 CGAGGTTTGTACACGTTTGGAC 60.033 50.000 0.00 0.00 37.04 4.02
2092 3527 2.203401 CGAGGTTTGTACACGTTTGGA 58.797 47.619 0.00 0.00 0.00 3.53
2093 3528 1.333435 GCGAGGTTTGTACACGTTTGG 60.333 52.381 0.00 0.00 0.00 3.28
2094 3529 1.595794 AGCGAGGTTTGTACACGTTTG 59.404 47.619 0.00 0.00 0.00 2.93
2095 3530 1.595794 CAGCGAGGTTTGTACACGTTT 59.404 47.619 0.00 0.00 0.00 3.60
2096 3531 1.214367 CAGCGAGGTTTGTACACGTT 58.786 50.000 0.00 0.00 0.00 3.99
2097 3532 0.599204 CCAGCGAGGTTTGTACACGT 60.599 55.000 0.00 0.00 0.00 4.49
2098 3533 2.150424 CCAGCGAGGTTTGTACACG 58.850 57.895 0.00 0.00 0.00 4.49
2123 3558 3.900601 TCCTGTAAATTGGCACCAAATGT 59.099 39.130 6.14 0.00 39.55 2.71
2124 3559 4.533919 TCCTGTAAATTGGCACCAAATG 57.466 40.909 6.14 0.00 39.55 2.32
2125 3560 5.760484 ATTCCTGTAAATTGGCACCAAAT 57.240 34.783 6.14 0.00 39.55 2.32
2126 3561 5.559148 AATTCCTGTAAATTGGCACCAAA 57.441 34.783 6.14 0.00 39.55 3.28
2127 3562 5.303971 CAAATTCCTGTAAATTGGCACCAA 58.696 37.500 4.24 4.24 40.47 3.67
2128 3563 4.262808 CCAAATTCCTGTAAATTGGCACCA 60.263 41.667 0.00 0.00 0.00 4.17
2129 3564 4.020662 TCCAAATTCCTGTAAATTGGCACC 60.021 41.667 0.00 0.00 0.00 5.01
2130 3565 4.929211 GTCCAAATTCCTGTAAATTGGCAC 59.071 41.667 0.00 0.00 0.00 5.01
2131 3566 4.837860 AGTCCAAATTCCTGTAAATTGGCA 59.162 37.500 0.00 0.00 0.00 4.92
2132 3567 5.405935 AGTCCAAATTCCTGTAAATTGGC 57.594 39.130 0.00 0.00 0.00 4.52
2133 3568 5.640732 CGAGTCCAAATTCCTGTAAATTGG 58.359 41.667 0.00 0.00 0.00 3.16
2134 3569 5.095490 GCGAGTCCAAATTCCTGTAAATTG 58.905 41.667 0.00 0.00 0.00 2.32
2135 3570 4.142687 CGCGAGTCCAAATTCCTGTAAATT 60.143 41.667 0.00 0.00 0.00 1.82
2136 3571 3.374058 CGCGAGTCCAAATTCCTGTAAAT 59.626 43.478 0.00 0.00 0.00 1.40
2137 3572 2.739913 CGCGAGTCCAAATTCCTGTAAA 59.260 45.455 0.00 0.00 0.00 2.01
2138 3573 2.289195 ACGCGAGTCCAAATTCCTGTAA 60.289 45.455 15.93 0.00 44.19 2.41
2139 3574 1.274167 ACGCGAGTCCAAATTCCTGTA 59.726 47.619 15.93 0.00 44.19 2.74
2140 3575 0.034896 ACGCGAGTCCAAATTCCTGT 59.965 50.000 15.93 0.00 44.19 4.00
2141 3576 2.840974 ACGCGAGTCCAAATTCCTG 58.159 52.632 15.93 0.00 44.19 3.86
2156 3591 0.669077 AGATATGTCCGTGGAGACGC 59.331 55.000 0.00 0.00 44.68 5.19
2157 3592 1.947456 TCAGATATGTCCGTGGAGACG 59.053 52.381 0.00 0.00 45.67 4.18
2158 3593 2.688446 TGTCAGATATGTCCGTGGAGAC 59.312 50.000 0.00 0.00 37.28 3.36
2159 3594 2.688446 GTGTCAGATATGTCCGTGGAGA 59.312 50.000 0.00 0.00 0.00 3.71
2160 3595 2.690497 AGTGTCAGATATGTCCGTGGAG 59.310 50.000 0.00 0.00 0.00 3.86
2161 3596 2.427095 CAGTGTCAGATATGTCCGTGGA 59.573 50.000 0.00 0.00 0.00 4.02
2162 3597 2.814269 CAGTGTCAGATATGTCCGTGG 58.186 52.381 0.00 0.00 0.00 4.94
2163 3598 2.196749 GCAGTGTCAGATATGTCCGTG 58.803 52.381 0.00 0.00 0.00 4.94
2164 3599 1.202302 CGCAGTGTCAGATATGTCCGT 60.202 52.381 0.00 0.00 0.00 4.69
2165 3600 1.202302 ACGCAGTGTCAGATATGTCCG 60.202 52.381 0.00 0.00 42.51 4.79
2166 3601 2.586258 ACGCAGTGTCAGATATGTCC 57.414 50.000 0.00 0.00 42.51 4.02
2167 3602 3.511699 TGAACGCAGTGTCAGATATGTC 58.488 45.455 0.00 0.00 45.00 3.06
2168 3603 3.592898 TGAACGCAGTGTCAGATATGT 57.407 42.857 0.00 0.00 45.00 2.29
2169 3604 3.241773 CGTTGAACGCAGTGTCAGATATG 60.242 47.826 4.26 0.00 45.00 1.78
2170 3605 2.923655 CGTTGAACGCAGTGTCAGATAT 59.076 45.455 4.26 0.00 45.00 1.63
2171 3606 2.030628 TCGTTGAACGCAGTGTCAGATA 60.031 45.455 13.62 0.00 45.00 1.98
2172 3607 1.139989 CGTTGAACGCAGTGTCAGAT 58.860 50.000 4.26 0.00 45.00 2.90
2173 3608 0.101579 TCGTTGAACGCAGTGTCAGA 59.898 50.000 13.62 0.00 45.00 3.27
2174 3609 0.229753 GTCGTTGAACGCAGTGTCAG 59.770 55.000 13.62 0.00 45.00 3.51
2175 3610 0.458716 TGTCGTTGAACGCAGTGTCA 60.459 50.000 13.62 2.68 45.00 3.58
2176 3611 0.648441 TTGTCGTTGAACGCAGTGTC 59.352 50.000 13.62 0.17 45.00 3.67
2177 3612 1.080298 TTTGTCGTTGAACGCAGTGT 58.920 45.000 13.62 0.00 45.00 3.55
2178 3613 2.166741 TTTTGTCGTTGAACGCAGTG 57.833 45.000 13.62 0.00 45.00 3.66
2180 3615 3.358775 TCAATTTTGTCGTTGAACGCAG 58.641 40.909 13.62 2.99 42.21 5.18
2181 3616 3.406728 TCAATTTTGTCGTTGAACGCA 57.593 38.095 13.62 11.49 42.21 5.24
2182 3617 3.971871 TCATCAATTTTGTCGTTGAACGC 59.028 39.130 13.62 8.91 42.21 4.84
2183 3618 6.023333 CGTATCATCAATTTTGTCGTTGAACG 60.023 38.462 12.12 12.12 44.19 3.95
2184 3619 6.248420 CCGTATCATCAATTTTGTCGTTGAAC 59.752 38.462 0.00 0.00 37.82 3.18
2185 3620 6.310960 CCGTATCATCAATTTTGTCGTTGAA 58.689 36.000 0.00 0.00 37.82 2.69
2186 3621 5.672570 GCCGTATCATCAATTTTGTCGTTGA 60.673 40.000 0.00 0.00 38.57 3.18
2187 3622 4.495472 GCCGTATCATCAATTTTGTCGTTG 59.505 41.667 0.00 0.00 0.00 4.10
2188 3623 4.438200 GGCCGTATCATCAATTTTGTCGTT 60.438 41.667 0.00 0.00 0.00 3.85
2189 3624 3.064820 GGCCGTATCATCAATTTTGTCGT 59.935 43.478 0.00 0.00 0.00 4.34
2190 3625 3.617669 GGCCGTATCATCAATTTTGTCG 58.382 45.455 0.00 0.00 0.00 4.35
2191 3626 3.311322 TCGGCCGTATCATCAATTTTGTC 59.689 43.478 27.15 0.00 0.00 3.18
2192 3627 3.275143 TCGGCCGTATCATCAATTTTGT 58.725 40.909 27.15 0.00 0.00 2.83
2193 3628 3.961477 TCGGCCGTATCATCAATTTTG 57.039 42.857 27.15 0.00 0.00 2.44
2194 3629 3.066203 GGTTCGGCCGTATCATCAATTTT 59.934 43.478 27.15 0.00 0.00 1.82
2195 3630 2.616842 GGTTCGGCCGTATCATCAATTT 59.383 45.455 27.15 0.00 0.00 1.82
2196 3631 2.218603 GGTTCGGCCGTATCATCAATT 58.781 47.619 27.15 0.00 0.00 2.32
2197 3632 1.140052 TGGTTCGGCCGTATCATCAAT 59.860 47.619 27.15 0.00 41.21 2.57
2198 3633 0.537653 TGGTTCGGCCGTATCATCAA 59.462 50.000 27.15 7.12 41.21 2.57
2199 3634 0.756294 ATGGTTCGGCCGTATCATCA 59.244 50.000 23.21 13.68 41.21 3.07
2200 3635 1.148310 CATGGTTCGGCCGTATCATC 58.852 55.000 25.64 9.77 41.21 2.92
2201 3636 0.756294 TCATGGTTCGGCCGTATCAT 59.244 50.000 23.21 23.21 41.21 2.45
2202 3637 0.537653 TTCATGGTTCGGCCGTATCA 59.462 50.000 27.15 23.70 41.21 2.15
2203 3638 1.217882 CTTCATGGTTCGGCCGTATC 58.782 55.000 27.15 17.75 41.21 2.24
2204 3639 0.539986 ACTTCATGGTTCGGCCGTAT 59.460 50.000 27.15 12.72 41.21 3.06
2205 3640 1.184431 TACTTCATGGTTCGGCCGTA 58.816 50.000 27.15 14.12 41.21 4.02
2206 3641 0.322322 TTACTTCATGGTTCGGCCGT 59.678 50.000 27.15 1.01 41.21 5.68
2207 3642 1.444836 TTTACTTCATGGTTCGGCCG 58.555 50.000 22.12 22.12 41.21 6.13
2208 3643 3.769536 CAATTTACTTCATGGTTCGGCC 58.230 45.455 0.00 0.00 37.90 6.13
2209 3644 3.179048 GCAATTTACTTCATGGTTCGGC 58.821 45.455 0.00 0.00 0.00 5.54
2210 3645 4.433186 TGCAATTTACTTCATGGTTCGG 57.567 40.909 0.00 0.00 0.00 4.30
2211 3646 6.761731 TTTTGCAATTTACTTCATGGTTCG 57.238 33.333 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.