Multiple sequence alignment - TraesCS3D01G235800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G235800 chr3D 100.000 2927 0 0 871 3797 326131762 326128836 0.000000e+00 5406
1 TraesCS3D01G235800 chr3D 100.000 457 0 0 1 457 326132632 326132176 0.000000e+00 845
2 TraesCS3D01G235800 chr3B 96.909 2912 80 5 889 3797 423540573 423537669 0.000000e+00 4870
3 TraesCS3D01G235800 chr3A 96.831 2840 70 10 908 3730 438775937 438778773 0.000000e+00 4728
4 TraesCS3D01G235800 chr3A 86.207 435 50 7 1 430 479073689 479073260 2.670000e-126 462
5 TraesCS3D01G235800 chr3A 93.000 100 7 0 3698 3797 438778775 438778874 3.060000e-31 147
6 TraesCS3D01G235800 chr2D 89.474 456 41 5 1 453 394125538 394125087 1.530000e-158 569
7 TraesCS3D01G235800 chr1B 85.498 462 58 6 1 457 394402623 394402166 1.230000e-129 473
8 TraesCS3D01G235800 chr5B 85.714 378 46 6 65 438 66275230 66275603 3.560000e-105 392
9 TraesCS3D01G235800 chr5D 80.387 413 70 9 5 411 438463236 438462829 1.710000e-78 303
10 TraesCS3D01G235800 chr7B 78.554 415 82 6 5 415 337469572 337469161 2.250000e-67 267
11 TraesCS3D01G235800 chr4D 95.789 95 3 1 3687 3781 300488819 300488912 6.570000e-33 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G235800 chr3D 326128836 326132632 3796 True 3125.5 5406 100.0000 1 3797 2 chr3D.!!$R1 3796
1 TraesCS3D01G235800 chr3B 423537669 423540573 2904 True 4870.0 4870 96.9090 889 3797 1 chr3B.!!$R1 2908
2 TraesCS3D01G235800 chr3A 438775937 438778874 2937 False 2437.5 4728 94.9155 908 3797 2 chr3A.!!$F1 2889

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
169 170 0.250467 TCACAAGCTCTGCCAACCTC 60.250 55.0 0.00 0.0 0.0 3.85 F
289 290 0.322975 AGCATGCTGAGAAACGACCT 59.677 50.0 21.98 0.0 0.0 3.85 F
944 947 0.682852 CACTACCCTTTCCGTCCACA 59.317 55.0 0.00 0.0 0.0 4.17 F
1003 1015 1.939974 TGAACTCGAGCCACATATGC 58.060 50.0 13.61 0.0 0.0 3.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1854 1866 0.034476 TTCTCTCAGGTGCTGCACTG 59.966 55.000 29.54 23.79 34.40 3.66 R
1995 2007 3.751175 GGCTACATGCTGTGAGTAAACAA 59.249 43.478 0.00 0.00 42.39 2.83 R
2765 2777 1.174712 CCCACAAGAGCACAACCCAG 61.175 60.000 0.00 0.00 0.00 4.45 R
2897 2916 5.065704 TCAGCTTCTGAGTTCACATAGAC 57.934 43.478 0.00 0.00 35.39 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.957798 ACCATCATACAATTGTGCTCTTTG 58.042 37.500 21.42 10.37 0.00 2.77
24 25 5.477984 ACCATCATACAATTGTGCTCTTTGT 59.522 36.000 21.42 7.34 37.37 2.83
25 26 6.658816 ACCATCATACAATTGTGCTCTTTGTA 59.341 34.615 21.42 13.43 39.41 2.41
26 27 6.968904 CCATCATACAATTGTGCTCTTTGTAC 59.031 38.462 21.42 0.00 38.31 2.90
27 28 6.494893 TCATACAATTGTGCTCTTTGTACC 57.505 37.500 21.42 0.00 38.31 3.34
28 29 6.237901 TCATACAATTGTGCTCTTTGTACCT 58.762 36.000 21.42 0.00 38.31 3.08
29 30 6.371548 TCATACAATTGTGCTCTTTGTACCTC 59.628 38.462 21.42 0.00 38.31 3.85
30 31 3.821033 ACAATTGTGCTCTTTGTACCTCC 59.179 43.478 11.07 0.00 32.09 4.30
31 32 3.788227 ATTGTGCTCTTTGTACCTCCA 57.212 42.857 0.00 0.00 0.00 3.86
32 33 3.569194 TTGTGCTCTTTGTACCTCCAA 57.431 42.857 0.00 0.00 0.00 3.53
33 34 2.846193 TGTGCTCTTTGTACCTCCAAC 58.154 47.619 0.00 0.00 0.00 3.77
34 35 2.171659 TGTGCTCTTTGTACCTCCAACA 59.828 45.455 0.00 0.00 0.00 3.33
35 36 2.548480 GTGCTCTTTGTACCTCCAACAC 59.452 50.000 0.00 0.00 0.00 3.32
36 37 2.438021 TGCTCTTTGTACCTCCAACACT 59.562 45.455 0.00 0.00 0.00 3.55
37 38 2.808543 GCTCTTTGTACCTCCAACACTG 59.191 50.000 0.00 0.00 0.00 3.66
38 39 3.494398 GCTCTTTGTACCTCCAACACTGA 60.494 47.826 0.00 0.00 0.00 3.41
39 40 4.703897 CTCTTTGTACCTCCAACACTGAA 58.296 43.478 0.00 0.00 0.00 3.02
40 41 4.703897 TCTTTGTACCTCCAACACTGAAG 58.296 43.478 0.00 0.00 0.00 3.02
41 42 4.407621 TCTTTGTACCTCCAACACTGAAGA 59.592 41.667 0.00 0.00 0.00 2.87
42 43 4.764050 TTGTACCTCCAACACTGAAGAA 57.236 40.909 0.00 0.00 0.00 2.52
43 44 4.764050 TGTACCTCCAACACTGAAGAAA 57.236 40.909 0.00 0.00 0.00 2.52
44 45 4.448210 TGTACCTCCAACACTGAAGAAAC 58.552 43.478 0.00 0.00 0.00 2.78
45 46 3.644966 ACCTCCAACACTGAAGAAACA 57.355 42.857 0.00 0.00 0.00 2.83
46 47 3.963129 ACCTCCAACACTGAAGAAACAA 58.037 40.909 0.00 0.00 0.00 2.83
47 48 3.694566 ACCTCCAACACTGAAGAAACAAC 59.305 43.478 0.00 0.00 0.00 3.32
48 49 3.066760 CCTCCAACACTGAAGAAACAACC 59.933 47.826 0.00 0.00 0.00 3.77
49 50 3.691575 TCCAACACTGAAGAAACAACCA 58.308 40.909 0.00 0.00 0.00 3.67
50 51 4.277476 TCCAACACTGAAGAAACAACCAT 58.723 39.130 0.00 0.00 0.00 3.55
51 52 4.097741 TCCAACACTGAAGAAACAACCATG 59.902 41.667 0.00 0.00 0.00 3.66
52 53 4.142182 CCAACACTGAAGAAACAACCATGT 60.142 41.667 0.00 0.00 43.14 3.21
53 54 5.067153 CCAACACTGAAGAAACAACCATGTA 59.933 40.000 0.00 0.00 39.40 2.29
54 55 6.239008 CCAACACTGAAGAAACAACCATGTAT 60.239 38.462 0.00 0.00 39.40 2.29
55 56 6.959639 ACACTGAAGAAACAACCATGTATT 57.040 33.333 0.00 0.00 39.40 1.89
56 57 7.346751 ACACTGAAGAAACAACCATGTATTT 57.653 32.000 0.00 0.00 39.40 1.40
57 58 7.202526 ACACTGAAGAAACAACCATGTATTTG 58.797 34.615 0.00 0.00 39.40 2.32
58 59 7.147915 ACACTGAAGAAACAACCATGTATTTGT 60.148 33.333 0.00 0.00 39.40 2.83
59 60 7.706179 CACTGAAGAAACAACCATGTATTTGTT 59.294 33.333 10.14 10.14 45.68 2.83
60 61 7.920682 ACTGAAGAAACAACCATGTATTTGTTC 59.079 33.333 14.33 11.68 43.53 3.18
61 62 8.006298 TGAAGAAACAACCATGTATTTGTTCT 57.994 30.769 14.33 11.28 43.53 3.01
62 63 7.920151 TGAAGAAACAACCATGTATTTGTTCTG 59.080 33.333 14.33 0.00 43.53 3.02
63 64 6.748132 AGAAACAACCATGTATTTGTTCTGG 58.252 36.000 14.33 0.00 43.53 3.86
64 65 5.467035 AACAACCATGTATTTGTTCTGGG 57.533 39.130 10.14 0.00 41.09 4.45
65 66 4.735369 ACAACCATGTATTTGTTCTGGGA 58.265 39.130 0.00 0.00 38.24 4.37
66 67 4.522789 ACAACCATGTATTTGTTCTGGGAC 59.477 41.667 0.00 0.00 38.24 4.46
67 68 4.657814 ACCATGTATTTGTTCTGGGACT 57.342 40.909 0.00 0.00 0.00 3.85
68 69 4.335416 ACCATGTATTTGTTCTGGGACTG 58.665 43.478 0.00 0.00 0.00 3.51
69 70 3.129287 CCATGTATTTGTTCTGGGACTGC 59.871 47.826 0.00 0.00 0.00 4.40
70 71 3.500448 TGTATTTGTTCTGGGACTGCA 57.500 42.857 0.00 0.00 0.00 4.41
71 72 3.826524 TGTATTTGTTCTGGGACTGCAA 58.173 40.909 0.00 0.00 0.00 4.08
72 73 3.568007 TGTATTTGTTCTGGGACTGCAAC 59.432 43.478 0.00 0.00 0.00 4.17
73 74 2.435372 TTTGTTCTGGGACTGCAACT 57.565 45.000 0.00 0.00 0.00 3.16
74 75 2.435372 TTGTTCTGGGACTGCAACTT 57.565 45.000 0.00 0.00 0.00 2.66
75 76 2.435372 TGTTCTGGGACTGCAACTTT 57.565 45.000 0.00 0.00 0.00 2.66
76 77 2.023673 TGTTCTGGGACTGCAACTTTG 58.976 47.619 0.00 0.00 0.00 2.77
86 87 3.354678 CAACTTTGCCCTCACCCG 58.645 61.111 0.00 0.00 0.00 5.28
87 88 2.597510 AACTTTGCCCTCACCCGC 60.598 61.111 0.00 0.00 0.00 6.13
88 89 3.133365 AACTTTGCCCTCACCCGCT 62.133 57.895 0.00 0.00 0.00 5.52
89 90 3.058160 CTTTGCCCTCACCCGCTG 61.058 66.667 0.00 0.00 0.00 5.18
90 91 4.659172 TTTGCCCTCACCCGCTGG 62.659 66.667 0.00 0.00 37.80 4.85
101 102 2.677228 CCGCTGGGACCCAATTCT 59.323 61.111 15.87 0.00 30.80 2.40
102 103 1.750399 CCGCTGGGACCCAATTCTG 60.750 63.158 15.87 3.23 30.80 3.02
103 104 1.299648 CGCTGGGACCCAATTCTGA 59.700 57.895 15.87 0.00 30.80 3.27
104 105 0.745845 CGCTGGGACCCAATTCTGAG 60.746 60.000 15.87 1.61 30.80 3.35
105 106 0.620556 GCTGGGACCCAATTCTGAGA 59.379 55.000 15.87 0.00 30.80 3.27
106 107 1.004745 GCTGGGACCCAATTCTGAGAA 59.995 52.381 15.87 0.00 30.80 2.87
107 108 2.555227 GCTGGGACCCAATTCTGAGAAA 60.555 50.000 15.87 0.00 30.80 2.52
108 109 3.879321 GCTGGGACCCAATTCTGAGAAAT 60.879 47.826 15.87 0.00 30.80 2.17
109 110 4.628715 GCTGGGACCCAATTCTGAGAAATA 60.629 45.833 15.87 0.00 30.80 1.40
110 111 5.699143 CTGGGACCCAATTCTGAGAAATAT 58.301 41.667 15.87 0.00 30.80 1.28
111 112 6.691491 GCTGGGACCCAATTCTGAGAAATATA 60.691 42.308 15.87 0.00 30.80 0.86
112 113 6.841601 TGGGACCCAATTCTGAGAAATATAG 58.158 40.000 12.05 0.00 0.00 1.31
113 114 6.619437 TGGGACCCAATTCTGAGAAATATAGA 59.381 38.462 12.05 0.00 0.00 1.98
114 115 6.937465 GGGACCCAATTCTGAGAAATATAGAC 59.063 42.308 5.33 0.00 0.00 2.59
115 116 7.420214 GGGACCCAATTCTGAGAAATATAGACA 60.420 40.741 5.33 0.00 0.00 3.41
116 117 7.442666 GGACCCAATTCTGAGAAATATAGACAC 59.557 40.741 0.00 0.00 0.00 3.67
117 118 7.861629 ACCCAATTCTGAGAAATATAGACACA 58.138 34.615 0.00 0.00 0.00 3.72
118 119 7.989741 ACCCAATTCTGAGAAATATAGACACAG 59.010 37.037 0.00 0.00 0.00 3.66
119 120 8.206867 CCCAATTCTGAGAAATATAGACACAGA 58.793 37.037 0.00 0.00 31.75 3.41
120 121 9.258826 CCAATTCTGAGAAATATAGACACAGAG 57.741 37.037 0.00 0.00 34.19 3.35
121 122 9.258826 CAATTCTGAGAAATATAGACACAGAGG 57.741 37.037 0.00 0.00 34.19 3.69
122 123 7.962995 TTCTGAGAAATATAGACACAGAGGT 57.037 36.000 0.00 0.00 34.19 3.85
123 124 9.647918 ATTCTGAGAAATATAGACACAGAGGTA 57.352 33.333 0.00 0.00 34.19 3.08
124 125 8.453238 TCTGAGAAATATAGACACAGAGGTAC 57.547 38.462 0.00 0.00 30.60 3.34
126 127 8.824756 TGAGAAATATAGACACAGAGGTACTT 57.175 34.615 0.00 0.00 41.55 2.24
127 128 8.904834 TGAGAAATATAGACACAGAGGTACTTC 58.095 37.037 0.00 0.00 41.55 3.01
128 129 9.127277 GAGAAATATAGACACAGAGGTACTTCT 57.873 37.037 0.82 0.82 41.55 2.85
141 142 9.693739 ACAGAGGTACTTCTATATATGATGAGG 57.306 37.037 7.25 0.00 41.55 3.86
142 143 9.693739 CAGAGGTACTTCTATATATGATGAGGT 57.306 37.037 7.25 1.21 41.55 3.85
155 156 9.797642 ATATATGATGAGGTTTTGCTATCACAA 57.202 29.630 0.00 0.00 31.34 3.33
156 157 5.885230 TGATGAGGTTTTGCTATCACAAG 57.115 39.130 0.00 0.00 0.00 3.16
157 158 4.156556 TGATGAGGTTTTGCTATCACAAGC 59.843 41.667 0.00 0.00 43.08 4.01
158 159 3.754965 TGAGGTTTTGCTATCACAAGCT 58.245 40.909 0.00 0.00 41.68 3.74
159 160 4.348198 GAGGTTTTGCTATCACAAGCTC 57.652 45.455 8.42 8.42 44.75 4.09
160 161 4.006319 GAGGTTTTGCTATCACAAGCTCT 58.994 43.478 14.34 0.00 46.16 4.09
161 162 3.755378 AGGTTTTGCTATCACAAGCTCTG 59.245 43.478 0.00 0.00 43.19 3.35
162 163 3.496155 GTTTTGCTATCACAAGCTCTGC 58.504 45.455 0.00 0.00 43.19 4.26
163 164 1.742761 TTGCTATCACAAGCTCTGCC 58.257 50.000 0.00 0.00 43.19 4.85
164 165 0.614812 TGCTATCACAAGCTCTGCCA 59.385 50.000 0.00 0.00 43.19 4.92
165 166 1.003464 TGCTATCACAAGCTCTGCCAA 59.997 47.619 0.00 0.00 43.19 4.52
166 167 1.399791 GCTATCACAAGCTCTGCCAAC 59.600 52.381 0.00 0.00 39.50 3.77
167 168 2.012673 CTATCACAAGCTCTGCCAACC 58.987 52.381 0.00 0.00 0.00 3.77
168 169 0.403271 ATCACAAGCTCTGCCAACCT 59.597 50.000 0.00 0.00 0.00 3.50
169 170 0.250467 TCACAAGCTCTGCCAACCTC 60.250 55.000 0.00 0.00 0.00 3.85
170 171 1.073897 ACAAGCTCTGCCAACCTCC 59.926 57.895 0.00 0.00 0.00 4.30
171 172 1.073722 CAAGCTCTGCCAACCTCCA 59.926 57.895 0.00 0.00 0.00 3.86
172 173 0.323178 CAAGCTCTGCCAACCTCCAT 60.323 55.000 0.00 0.00 0.00 3.41
173 174 0.407139 AAGCTCTGCCAACCTCCATT 59.593 50.000 0.00 0.00 0.00 3.16
174 175 0.323178 AGCTCTGCCAACCTCCATTG 60.323 55.000 0.00 0.00 0.00 2.82
175 176 1.941999 GCTCTGCCAACCTCCATTGC 61.942 60.000 0.00 0.00 0.00 3.56
176 177 1.304381 TCTGCCAACCTCCATTGCC 60.304 57.895 0.00 0.00 0.00 4.52
177 178 1.607178 CTGCCAACCTCCATTGCCA 60.607 57.895 0.00 0.00 0.00 4.92
178 179 0.974010 CTGCCAACCTCCATTGCCAT 60.974 55.000 0.00 0.00 0.00 4.40
179 180 1.259142 TGCCAACCTCCATTGCCATG 61.259 55.000 0.00 0.00 0.00 3.66
194 195 7.571089 CATTGCCATGGAAATCGTAATTATG 57.429 36.000 15.76 0.00 0.00 1.90
195 196 6.951062 TTGCCATGGAAATCGTAATTATGA 57.049 33.333 18.40 9.78 0.00 2.15
196 197 6.558771 TGCCATGGAAATCGTAATTATGAG 57.441 37.500 18.40 0.00 0.00 2.90
197 198 6.295249 TGCCATGGAAATCGTAATTATGAGA 58.705 36.000 18.40 2.72 0.00 3.27
198 199 6.942005 TGCCATGGAAATCGTAATTATGAGAT 59.058 34.615 18.40 4.47 0.00 2.75
199 200 7.094677 TGCCATGGAAATCGTAATTATGAGATG 60.095 37.037 18.40 8.97 0.00 2.90
200 201 7.246311 CCATGGAAATCGTAATTATGAGATGC 58.754 38.462 5.56 9.45 0.00 3.91
201 202 7.120285 CCATGGAAATCGTAATTATGAGATGCT 59.880 37.037 5.56 0.00 0.00 3.79
202 203 7.425577 TGGAAATCGTAATTATGAGATGCTG 57.574 36.000 12.72 0.00 0.00 4.41
203 204 6.427853 TGGAAATCGTAATTATGAGATGCTGG 59.572 38.462 12.72 0.00 0.00 4.85
204 205 6.650807 GGAAATCGTAATTATGAGATGCTGGA 59.349 38.462 12.72 0.00 0.00 3.86
205 206 7.173218 GGAAATCGTAATTATGAGATGCTGGAA 59.827 37.037 12.72 0.00 0.00 3.53
206 207 8.627208 AAATCGTAATTATGAGATGCTGGAAT 57.373 30.769 12.72 0.00 0.00 3.01
207 208 9.725019 AAATCGTAATTATGAGATGCTGGAATA 57.275 29.630 12.72 0.00 0.00 1.75
208 209 9.896645 AATCGTAATTATGAGATGCTGGAATAT 57.103 29.630 12.72 0.00 0.00 1.28
209 210 9.896645 ATCGTAATTATGAGATGCTGGAATATT 57.103 29.630 12.72 0.00 0.00 1.28
210 211 9.725019 TCGTAATTATGAGATGCTGGAATATTT 57.275 29.630 3.14 0.00 0.00 1.40
211 212 9.764870 CGTAATTATGAGATGCTGGAATATTTG 57.235 33.333 0.00 0.00 0.00 2.32
213 214 8.945195 AATTATGAGATGCTGGAATATTTGGA 57.055 30.769 0.00 0.00 0.00 3.53
214 215 9.543231 AATTATGAGATGCTGGAATATTTGGAT 57.457 29.630 0.00 0.00 0.00 3.41
215 216 8.571461 TTATGAGATGCTGGAATATTTGGATC 57.429 34.615 9.07 9.07 0.00 3.36
216 217 5.319453 TGAGATGCTGGAATATTTGGATCC 58.681 41.667 4.20 4.20 0.00 3.36
217 218 5.163066 TGAGATGCTGGAATATTTGGATCCA 60.163 40.000 11.44 11.44 40.84 3.41
218 219 5.708544 AGATGCTGGAATATTTGGATCCAA 58.291 37.500 23.63 23.63 42.41 3.53
219 220 5.773680 AGATGCTGGAATATTTGGATCCAAG 59.226 40.000 25.69 13.62 42.41 3.61
220 221 4.870636 TGCTGGAATATTTGGATCCAAGT 58.129 39.130 25.69 24.87 42.41 3.16
221 222 6.012337 TGCTGGAATATTTGGATCCAAGTA 57.988 37.500 26.47 26.47 42.41 2.24
222 223 6.430864 TGCTGGAATATTTGGATCCAAGTAA 58.569 36.000 27.59 15.47 42.41 2.24
223 224 6.894654 TGCTGGAATATTTGGATCCAAGTAAA 59.105 34.615 27.59 15.13 42.41 2.01
224 225 7.564660 TGCTGGAATATTTGGATCCAAGTAAAT 59.435 33.333 27.59 20.70 42.41 1.40
225 226 7.869429 GCTGGAATATTTGGATCCAAGTAAATG 59.131 37.037 27.59 18.08 42.41 2.32
226 227 9.135189 CTGGAATATTTGGATCCAAGTAAATGA 57.865 33.333 27.59 13.43 42.41 2.57
227 228 9.486123 TGGAATATTTGGATCCAAGTAAATGAA 57.514 29.630 27.59 12.75 40.19 2.57
234 235 8.884124 TTGGATCCAAGTAAATGAAAAGATCT 57.116 30.769 23.63 0.00 31.66 2.75
235 236 8.884124 TGGATCCAAGTAAATGAAAAGATCTT 57.116 30.769 13.46 0.88 31.66 2.40
236 237 8.742777 TGGATCCAAGTAAATGAAAAGATCTTG 58.257 33.333 13.46 0.00 31.66 3.02
237 238 8.960591 GGATCCAAGTAAATGAAAAGATCTTGA 58.039 33.333 9.17 0.00 34.62 3.02
240 241 9.354673 TCCAAGTAAATGAAAAGATCTTGAACT 57.645 29.630 9.17 2.76 34.62 3.01
241 242 9.617975 CCAAGTAAATGAAAAGATCTTGAACTC 57.382 33.333 9.17 4.64 34.62 3.01
242 243 9.617975 CAAGTAAATGAAAAGATCTTGAACTCC 57.382 33.333 9.17 0.00 34.62 3.85
243 244 8.924511 AGTAAATGAAAAGATCTTGAACTCCA 57.075 30.769 9.17 1.93 0.00 3.86
244 245 9.354673 AGTAAATGAAAAGATCTTGAACTCCAA 57.645 29.630 9.17 0.00 0.00 3.53
245 246 9.965824 GTAAATGAAAAGATCTTGAACTCCAAA 57.034 29.630 9.17 0.00 33.76 3.28
246 247 8.877808 AAATGAAAAGATCTTGAACTCCAAAC 57.122 30.769 9.17 0.00 33.76 2.93
247 248 6.391227 TGAAAAGATCTTGAACTCCAAACC 57.609 37.500 9.17 0.00 33.76 3.27
248 249 5.890985 TGAAAAGATCTTGAACTCCAAACCA 59.109 36.000 9.17 0.00 33.76 3.67
249 250 6.550854 TGAAAAGATCTTGAACTCCAAACCAT 59.449 34.615 9.17 0.00 33.76 3.55
250 251 6.983906 AAAGATCTTGAACTCCAAACCATT 57.016 33.333 9.17 0.00 33.76 3.16
251 252 6.581171 AAGATCTTGAACTCCAAACCATTC 57.419 37.500 7.30 0.00 33.76 2.67
252 253 5.012893 AGATCTTGAACTCCAAACCATTCC 58.987 41.667 0.00 0.00 33.76 3.01
253 254 3.496331 TCTTGAACTCCAAACCATTCCC 58.504 45.455 0.00 0.00 33.76 3.97
254 255 3.117322 TCTTGAACTCCAAACCATTCCCA 60.117 43.478 0.00 0.00 33.76 4.37
255 256 2.593026 TGAACTCCAAACCATTCCCAC 58.407 47.619 0.00 0.00 0.00 4.61
256 257 2.176798 TGAACTCCAAACCATTCCCACT 59.823 45.455 0.00 0.00 0.00 4.00
257 258 3.230976 GAACTCCAAACCATTCCCACTT 58.769 45.455 0.00 0.00 0.00 3.16
258 259 2.876581 ACTCCAAACCATTCCCACTTC 58.123 47.619 0.00 0.00 0.00 3.01
259 260 2.176798 ACTCCAAACCATTCCCACTTCA 59.823 45.455 0.00 0.00 0.00 3.02
260 261 2.558359 CTCCAAACCATTCCCACTTCAC 59.442 50.000 0.00 0.00 0.00 3.18
261 262 2.176798 TCCAAACCATTCCCACTTCACT 59.823 45.455 0.00 0.00 0.00 3.41
262 263 2.558359 CCAAACCATTCCCACTTCACTC 59.442 50.000 0.00 0.00 0.00 3.51
263 264 3.221771 CAAACCATTCCCACTTCACTCA 58.778 45.455 0.00 0.00 0.00 3.41
264 265 3.814504 AACCATTCCCACTTCACTCAT 57.185 42.857 0.00 0.00 0.00 2.90
265 266 3.077484 ACCATTCCCACTTCACTCATG 57.923 47.619 0.00 0.00 0.00 3.07
266 267 2.291153 ACCATTCCCACTTCACTCATGG 60.291 50.000 0.00 0.00 36.54 3.66
267 268 2.025981 CCATTCCCACTTCACTCATGGA 60.026 50.000 0.00 0.00 35.33 3.41
268 269 3.561960 CCATTCCCACTTCACTCATGGAA 60.562 47.826 0.00 0.00 35.33 3.53
269 270 3.874383 TTCCCACTTCACTCATGGAAA 57.126 42.857 0.00 0.00 35.33 3.13
270 271 3.874383 TCCCACTTCACTCATGGAAAA 57.126 42.857 0.00 0.00 35.33 2.29
271 272 3.754965 TCCCACTTCACTCATGGAAAAG 58.245 45.455 0.00 0.00 35.33 2.27
272 273 2.229784 CCCACTTCACTCATGGAAAAGC 59.770 50.000 0.00 0.00 35.33 3.51
273 274 2.886523 CCACTTCACTCATGGAAAAGCA 59.113 45.455 0.00 0.00 35.33 3.91
274 275 3.508793 CCACTTCACTCATGGAAAAGCAT 59.491 43.478 0.00 0.00 35.33 3.79
275 276 4.482386 CACTTCACTCATGGAAAAGCATG 58.518 43.478 0.00 0.00 0.00 4.06
276 277 3.057033 ACTTCACTCATGGAAAAGCATGC 60.057 43.478 10.51 10.51 0.00 4.06
277 278 2.799017 TCACTCATGGAAAAGCATGCT 58.201 42.857 16.30 16.30 0.00 3.79
278 279 2.490509 TCACTCATGGAAAAGCATGCTG 59.509 45.455 23.48 7.82 0.00 4.41
279 280 2.490509 CACTCATGGAAAAGCATGCTGA 59.509 45.455 23.48 12.12 0.00 4.26
280 281 2.753452 ACTCATGGAAAAGCATGCTGAG 59.247 45.455 23.48 22.75 35.82 3.35
281 282 3.014623 CTCATGGAAAAGCATGCTGAGA 58.985 45.455 23.48 10.35 32.36 3.27
282 283 3.423749 TCATGGAAAAGCATGCTGAGAA 58.576 40.909 23.48 6.90 0.00 2.87
283 284 3.827876 TCATGGAAAAGCATGCTGAGAAA 59.172 39.130 23.48 8.07 0.00 2.52
284 285 3.648339 TGGAAAAGCATGCTGAGAAAC 57.352 42.857 23.48 10.45 0.00 2.78
285 286 2.030893 TGGAAAAGCATGCTGAGAAACG 60.031 45.455 23.48 0.00 0.00 3.60
286 287 2.226437 GGAAAAGCATGCTGAGAAACGA 59.774 45.455 23.48 0.00 0.00 3.85
287 288 2.977405 AAAGCATGCTGAGAAACGAC 57.023 45.000 23.48 0.00 0.00 4.34
288 289 1.160137 AAGCATGCTGAGAAACGACC 58.840 50.000 23.48 0.00 0.00 4.79
289 290 0.322975 AGCATGCTGAGAAACGACCT 59.677 50.000 21.98 0.00 0.00 3.85
290 291 1.550524 AGCATGCTGAGAAACGACCTA 59.449 47.619 21.98 0.00 0.00 3.08
291 292 1.661112 GCATGCTGAGAAACGACCTAC 59.339 52.381 11.37 0.00 0.00 3.18
292 293 2.675317 GCATGCTGAGAAACGACCTACT 60.675 50.000 11.37 0.00 0.00 2.57
293 294 2.724977 TGCTGAGAAACGACCTACTG 57.275 50.000 0.00 0.00 0.00 2.74
294 295 1.336887 TGCTGAGAAACGACCTACTGC 60.337 52.381 0.00 0.00 0.00 4.40
295 296 1.067495 GCTGAGAAACGACCTACTGCT 60.067 52.381 0.00 0.00 0.00 4.24
296 297 2.163815 GCTGAGAAACGACCTACTGCTA 59.836 50.000 0.00 0.00 0.00 3.49
297 298 3.367087 GCTGAGAAACGACCTACTGCTAA 60.367 47.826 0.00 0.00 0.00 3.09
298 299 4.678309 GCTGAGAAACGACCTACTGCTAAT 60.678 45.833 0.00 0.00 0.00 1.73
299 300 4.995124 TGAGAAACGACCTACTGCTAATC 58.005 43.478 0.00 0.00 0.00 1.75
300 301 4.461431 TGAGAAACGACCTACTGCTAATCA 59.539 41.667 0.00 0.00 0.00 2.57
301 302 5.047590 TGAGAAACGACCTACTGCTAATCAA 60.048 40.000 0.00 0.00 0.00 2.57
302 303 5.411781 AGAAACGACCTACTGCTAATCAAG 58.588 41.667 0.00 0.00 0.00 3.02
317 318 6.116680 CTAATCAAGCACAGAATCAAGGAC 57.883 41.667 0.00 0.00 0.00 3.85
318 319 3.490439 TCAAGCACAGAATCAAGGACA 57.510 42.857 0.00 0.00 0.00 4.02
319 320 3.819368 TCAAGCACAGAATCAAGGACAA 58.181 40.909 0.00 0.00 0.00 3.18
320 321 4.206375 TCAAGCACAGAATCAAGGACAAA 58.794 39.130 0.00 0.00 0.00 2.83
321 322 4.828939 TCAAGCACAGAATCAAGGACAAAT 59.171 37.500 0.00 0.00 0.00 2.32
322 323 6.003326 TCAAGCACAGAATCAAGGACAAATA 58.997 36.000 0.00 0.00 0.00 1.40
323 324 6.660521 TCAAGCACAGAATCAAGGACAAATAT 59.339 34.615 0.00 0.00 0.00 1.28
324 325 6.446781 AGCACAGAATCAAGGACAAATATG 57.553 37.500 0.00 0.00 0.00 1.78
325 326 6.182627 AGCACAGAATCAAGGACAAATATGA 58.817 36.000 0.00 0.00 0.00 2.15
326 327 6.660521 AGCACAGAATCAAGGACAAATATGAA 59.339 34.615 0.00 0.00 0.00 2.57
327 328 6.971184 GCACAGAATCAAGGACAAATATGAAG 59.029 38.462 0.00 0.00 0.00 3.02
328 329 6.971184 CACAGAATCAAGGACAAATATGAAGC 59.029 38.462 0.00 0.00 0.00 3.86
329 330 6.888632 ACAGAATCAAGGACAAATATGAAGCT 59.111 34.615 0.00 0.00 0.00 3.74
330 331 7.066766 ACAGAATCAAGGACAAATATGAAGCTC 59.933 37.037 0.00 0.00 0.00 4.09
331 332 7.282675 CAGAATCAAGGACAAATATGAAGCTCT 59.717 37.037 0.00 0.00 0.00 4.09
332 333 7.833183 AGAATCAAGGACAAATATGAAGCTCTT 59.167 33.333 0.00 0.00 0.00 2.85
333 334 6.992063 TCAAGGACAAATATGAAGCTCTTC 57.008 37.500 2.80 2.80 39.91 2.87
334 335 6.715280 TCAAGGACAAATATGAAGCTCTTCT 58.285 36.000 10.56 0.47 40.14 2.85
335 336 6.820656 TCAAGGACAAATATGAAGCTCTTCTC 59.179 38.462 10.56 0.00 40.14 2.87
336 337 6.558488 AGGACAAATATGAAGCTCTTCTCT 57.442 37.500 10.56 1.97 40.14 3.10
337 338 6.581712 AGGACAAATATGAAGCTCTTCTCTC 58.418 40.000 10.56 0.00 40.14 3.20
338 339 6.155910 AGGACAAATATGAAGCTCTTCTCTCA 59.844 38.462 10.56 0.00 40.14 3.27
339 340 6.820656 GGACAAATATGAAGCTCTTCTCTCAA 59.179 38.462 10.56 0.00 40.14 3.02
340 341 7.011295 GGACAAATATGAAGCTCTTCTCTCAAG 59.989 40.741 10.56 1.25 40.14 3.02
341 342 7.393216 ACAAATATGAAGCTCTTCTCTCAAGT 58.607 34.615 10.56 1.76 40.14 3.16
342 343 7.882271 ACAAATATGAAGCTCTTCTCTCAAGTT 59.118 33.333 10.56 0.00 40.14 2.66
343 344 7.846644 AATATGAAGCTCTTCTCTCAAGTTG 57.153 36.000 10.56 0.00 40.14 3.16
344 345 4.000331 TGAAGCTCTTCTCTCAAGTTGG 58.000 45.455 10.56 0.00 40.14 3.77
345 346 3.643320 TGAAGCTCTTCTCTCAAGTTGGA 59.357 43.478 10.56 0.00 40.14 3.53
346 347 4.285517 TGAAGCTCTTCTCTCAAGTTGGAT 59.714 41.667 10.56 0.00 40.14 3.41
347 348 4.906747 AGCTCTTCTCTCAAGTTGGATT 57.093 40.909 2.34 0.00 0.00 3.01
348 349 4.577875 AGCTCTTCTCTCAAGTTGGATTG 58.422 43.478 2.34 0.00 0.00 2.67
349 350 4.285517 AGCTCTTCTCTCAAGTTGGATTGA 59.714 41.667 2.34 0.00 37.60 2.57
350 351 5.045724 AGCTCTTCTCTCAAGTTGGATTGAT 60.046 40.000 2.34 0.00 38.47 2.57
351 352 5.294060 GCTCTTCTCTCAAGTTGGATTGATC 59.706 44.000 2.34 0.00 38.47 2.92
352 353 6.364568 TCTTCTCTCAAGTTGGATTGATCA 57.635 37.500 2.34 0.00 38.47 2.92
353 354 6.772605 TCTTCTCTCAAGTTGGATTGATCAA 58.227 36.000 11.26 11.26 38.47 2.57
354 355 6.877855 TCTTCTCTCAAGTTGGATTGATCAAG 59.122 38.462 14.54 0.00 38.47 3.02
355 356 6.119240 TCTCTCAAGTTGGATTGATCAAGT 57.881 37.500 14.54 2.33 38.47 3.16
356 357 6.169094 TCTCTCAAGTTGGATTGATCAAGTC 58.831 40.000 14.54 10.95 38.47 3.01
357 358 5.248640 TCTCAAGTTGGATTGATCAAGTCC 58.751 41.667 20.99 20.99 38.47 3.85
358 359 5.013495 TCTCAAGTTGGATTGATCAAGTCCT 59.987 40.000 24.80 8.28 38.47 3.85
359 360 6.213397 TCTCAAGTTGGATTGATCAAGTCCTA 59.787 38.462 24.80 19.20 38.47 2.94
360 361 6.409704 TCAAGTTGGATTGATCAAGTCCTAG 58.590 40.000 24.80 15.58 34.31 3.02
361 362 6.213397 TCAAGTTGGATTGATCAAGTCCTAGA 59.787 38.462 24.80 16.78 34.31 2.43
362 363 6.821616 AGTTGGATTGATCAAGTCCTAGAT 57.178 37.500 24.80 13.83 33.15 1.98
363 364 7.205515 AGTTGGATTGATCAAGTCCTAGATT 57.794 36.000 24.80 12.96 33.15 2.40
364 365 7.052873 AGTTGGATTGATCAAGTCCTAGATTG 58.947 38.462 24.80 0.00 33.15 2.67
365 366 5.371526 TGGATTGATCAAGTCCTAGATTGC 58.628 41.667 24.80 10.04 33.15 3.56
366 367 5.104402 TGGATTGATCAAGTCCTAGATTGCA 60.104 40.000 24.80 11.96 33.15 4.08
367 368 5.824624 GGATTGATCAAGTCCTAGATTGCAA 59.175 40.000 20.71 0.00 0.00 4.08
368 369 6.238593 GGATTGATCAAGTCCTAGATTGCAAC 60.239 42.308 20.71 0.00 0.00 4.17
369 370 5.426689 TGATCAAGTCCTAGATTGCAACT 57.573 39.130 0.00 3.93 0.00 3.16
370 371 5.181009 TGATCAAGTCCTAGATTGCAACTG 58.819 41.667 0.00 0.00 0.00 3.16
371 372 4.890158 TCAAGTCCTAGATTGCAACTGA 57.110 40.909 0.00 0.00 0.00 3.41
372 373 5.426689 TCAAGTCCTAGATTGCAACTGAT 57.573 39.130 0.00 0.00 0.00 2.90
373 374 5.423015 TCAAGTCCTAGATTGCAACTGATC 58.577 41.667 0.00 0.00 0.00 2.92
374 375 5.188555 TCAAGTCCTAGATTGCAACTGATCT 59.811 40.000 0.00 3.03 36.61 2.75
375 376 6.381133 TCAAGTCCTAGATTGCAACTGATCTA 59.619 38.462 0.00 4.21 34.60 1.98
376 377 6.798427 AGTCCTAGATTGCAACTGATCTAA 57.202 37.500 0.00 0.00 35.19 2.10
377 378 6.578023 AGTCCTAGATTGCAACTGATCTAAC 58.422 40.000 0.00 1.68 35.19 2.34
378 379 6.155221 AGTCCTAGATTGCAACTGATCTAACA 59.845 38.462 0.00 0.00 35.19 2.41
379 380 6.989169 GTCCTAGATTGCAACTGATCTAACAT 59.011 38.462 0.00 0.00 35.19 2.71
380 381 6.988580 TCCTAGATTGCAACTGATCTAACATG 59.011 38.462 0.00 0.00 35.19 3.21
381 382 6.765036 CCTAGATTGCAACTGATCTAACATGT 59.235 38.462 0.00 0.00 35.19 3.21
382 383 7.281774 CCTAGATTGCAACTGATCTAACATGTT 59.718 37.037 16.68 16.68 35.19 2.71
383 384 7.081526 AGATTGCAACTGATCTAACATGTTC 57.918 36.000 15.85 0.70 31.09 3.18
384 385 4.926860 TGCAACTGATCTAACATGTTCG 57.073 40.909 15.85 9.28 0.00 3.95
385 386 3.684305 TGCAACTGATCTAACATGTTCGG 59.316 43.478 15.85 8.46 0.00 4.30
386 387 3.684788 GCAACTGATCTAACATGTTCGGT 59.315 43.478 15.85 9.16 0.00 4.69
387 388 4.154195 GCAACTGATCTAACATGTTCGGTT 59.846 41.667 15.85 14.80 36.34 4.44
388 389 5.334879 GCAACTGATCTAACATGTTCGGTTT 60.335 40.000 15.85 0.00 34.74 3.27
389 390 6.668323 CAACTGATCTAACATGTTCGGTTTT 58.332 36.000 15.85 0.00 34.74 2.43
390 391 6.241207 ACTGATCTAACATGTTCGGTTTTG 57.759 37.500 15.85 4.28 0.00 2.44
391 392 5.041951 TGATCTAACATGTTCGGTTTTGC 57.958 39.130 15.85 0.00 0.00 3.68
392 393 4.759693 TGATCTAACATGTTCGGTTTTGCT 59.240 37.500 15.85 0.00 0.00 3.91
393 394 5.935206 TGATCTAACATGTTCGGTTTTGCTA 59.065 36.000 15.85 0.00 0.00 3.49
394 395 5.856126 TCTAACATGTTCGGTTTTGCTAG 57.144 39.130 15.85 2.80 0.00 3.42
395 396 5.543714 TCTAACATGTTCGGTTTTGCTAGA 58.456 37.500 15.85 5.33 0.00 2.43
396 397 4.749245 AACATGTTCGGTTTTGCTAGAG 57.251 40.909 4.92 0.00 0.00 2.43
397 398 2.484264 ACATGTTCGGTTTTGCTAGAGC 59.516 45.455 0.00 0.00 42.50 4.09
398 399 2.543777 TGTTCGGTTTTGCTAGAGCT 57.456 45.000 2.72 0.00 42.66 4.09
399 400 2.143122 TGTTCGGTTTTGCTAGAGCTG 58.857 47.619 2.72 0.00 42.66 4.24
400 401 1.464997 GTTCGGTTTTGCTAGAGCTGG 59.535 52.381 2.72 0.00 42.66 4.85
401 402 0.973632 TCGGTTTTGCTAGAGCTGGA 59.026 50.000 2.72 0.00 42.66 3.86
402 403 1.346395 TCGGTTTTGCTAGAGCTGGAA 59.654 47.619 2.72 0.00 42.66 3.53
403 404 2.027192 TCGGTTTTGCTAGAGCTGGAAT 60.027 45.455 2.72 0.00 42.66 3.01
404 405 2.749621 CGGTTTTGCTAGAGCTGGAATT 59.250 45.455 2.72 0.00 42.66 2.17
405 406 3.426695 CGGTTTTGCTAGAGCTGGAATTG 60.427 47.826 2.72 0.00 42.66 2.32
406 407 3.119352 GGTTTTGCTAGAGCTGGAATTGG 60.119 47.826 2.72 0.00 42.66 3.16
407 408 3.719268 TTTGCTAGAGCTGGAATTGGA 57.281 42.857 2.72 0.00 42.66 3.53
408 409 3.939740 TTGCTAGAGCTGGAATTGGAT 57.060 42.857 2.72 0.00 42.66 3.41
409 410 5.372343 TTTGCTAGAGCTGGAATTGGATA 57.628 39.130 2.72 0.00 42.66 2.59
410 411 4.613925 TGCTAGAGCTGGAATTGGATAG 57.386 45.455 2.72 0.00 42.66 2.08
411 412 4.226384 TGCTAGAGCTGGAATTGGATAGA 58.774 43.478 2.72 0.00 42.66 1.98
412 413 4.842948 TGCTAGAGCTGGAATTGGATAGAT 59.157 41.667 2.72 0.00 42.66 1.98
413 414 5.177326 GCTAGAGCTGGAATTGGATAGATG 58.823 45.833 0.00 0.00 38.21 2.90
414 415 5.279910 GCTAGAGCTGGAATTGGATAGATGT 60.280 44.000 0.00 0.00 38.21 3.06
415 416 5.643421 AGAGCTGGAATTGGATAGATGTT 57.357 39.130 0.00 0.00 0.00 2.71
416 417 6.011122 AGAGCTGGAATTGGATAGATGTTT 57.989 37.500 0.00 0.00 0.00 2.83
417 418 5.826737 AGAGCTGGAATTGGATAGATGTTTG 59.173 40.000 0.00 0.00 0.00 2.93
418 419 4.340381 AGCTGGAATTGGATAGATGTTTGC 59.660 41.667 0.00 0.00 0.00 3.68
419 420 4.340381 GCTGGAATTGGATAGATGTTTGCT 59.660 41.667 0.00 0.00 0.00 3.91
420 421 5.163478 GCTGGAATTGGATAGATGTTTGCTT 60.163 40.000 0.00 0.00 0.00 3.91
421 422 6.628844 GCTGGAATTGGATAGATGTTTGCTTT 60.629 38.462 0.00 0.00 0.00 3.51
422 423 6.866480 TGGAATTGGATAGATGTTTGCTTTC 58.134 36.000 0.00 0.00 0.00 2.62
423 424 6.664816 TGGAATTGGATAGATGTTTGCTTTCT 59.335 34.615 0.00 0.00 0.00 2.52
424 425 7.178983 TGGAATTGGATAGATGTTTGCTTTCTT 59.821 33.333 0.00 0.00 0.00 2.52
425 426 8.037166 GGAATTGGATAGATGTTTGCTTTCTTT 58.963 33.333 0.00 0.00 0.00 2.52
426 427 8.767478 AATTGGATAGATGTTTGCTTTCTTTG 57.233 30.769 0.00 0.00 0.00 2.77
427 428 6.899393 TGGATAGATGTTTGCTTTCTTTGT 57.101 33.333 0.00 0.00 0.00 2.83
428 429 7.288810 TGGATAGATGTTTGCTTTCTTTGTT 57.711 32.000 0.00 0.00 0.00 2.83
429 430 7.725251 TGGATAGATGTTTGCTTTCTTTGTTT 58.275 30.769 0.00 0.00 0.00 2.83
430 431 8.203485 TGGATAGATGTTTGCTTTCTTTGTTTT 58.797 29.630 0.00 0.00 0.00 2.43
431 432 9.045223 GGATAGATGTTTGCTTTCTTTGTTTTT 57.955 29.630 0.00 0.00 0.00 1.94
433 434 9.822185 ATAGATGTTTGCTTTCTTTGTTTTTCT 57.178 25.926 0.00 0.00 0.00 2.52
434 435 8.189709 AGATGTTTGCTTTCTTTGTTTTTCTC 57.810 30.769 0.00 0.00 0.00 2.87
435 436 8.037166 AGATGTTTGCTTTCTTTGTTTTTCTCT 58.963 29.630 0.00 0.00 0.00 3.10
436 437 7.961325 TGTTTGCTTTCTTTGTTTTTCTCTT 57.039 28.000 0.00 0.00 0.00 2.85
437 438 9.651913 ATGTTTGCTTTCTTTGTTTTTCTCTTA 57.348 25.926 0.00 0.00 0.00 2.10
438 439 8.921670 TGTTTGCTTTCTTTGTTTTTCTCTTAC 58.078 29.630 0.00 0.00 0.00 2.34
439 440 8.921670 GTTTGCTTTCTTTGTTTTTCTCTTACA 58.078 29.630 0.00 0.00 0.00 2.41
440 441 8.460831 TTGCTTTCTTTGTTTTTCTCTTACAC 57.539 30.769 0.00 0.00 0.00 2.90
441 442 7.033185 TGCTTTCTTTGTTTTTCTCTTACACC 58.967 34.615 0.00 0.00 0.00 4.16
442 443 7.093945 TGCTTTCTTTGTTTTTCTCTTACACCT 60.094 33.333 0.00 0.00 0.00 4.00
443 444 7.220875 GCTTTCTTTGTTTTTCTCTTACACCTG 59.779 37.037 0.00 0.00 0.00 4.00
444 445 7.696992 TTCTTTGTTTTTCTCTTACACCTGT 57.303 32.000 0.00 0.00 0.00 4.00
445 446 8.795842 TTCTTTGTTTTTCTCTTACACCTGTA 57.204 30.769 0.00 0.00 0.00 2.74
446 447 8.205131 TCTTTGTTTTTCTCTTACACCTGTAC 57.795 34.615 0.00 0.00 0.00 2.90
447 448 7.825270 TCTTTGTTTTTCTCTTACACCTGTACA 59.175 33.333 0.00 0.00 0.00 2.90
448 449 7.925043 TTGTTTTTCTCTTACACCTGTACAA 57.075 32.000 0.00 0.00 0.00 2.41
449 450 7.925043 TGTTTTTCTCTTACACCTGTACAAA 57.075 32.000 0.00 0.00 0.00 2.83
450 451 8.338072 TGTTTTTCTCTTACACCTGTACAAAA 57.662 30.769 0.00 0.00 0.00 2.44
451 452 8.794553 TGTTTTTCTCTTACACCTGTACAAAAA 58.205 29.630 0.00 0.00 0.00 1.94
452 453 9.069078 GTTTTTCTCTTACACCTGTACAAAAAC 57.931 33.333 0.00 3.01 34.05 2.43
453 454 8.570068 TTTTCTCTTACACCTGTACAAAAACT 57.430 30.769 0.00 0.00 0.00 2.66
454 455 8.570068 TTTCTCTTACACCTGTACAAAAACTT 57.430 30.769 0.00 0.00 0.00 2.66
455 456 9.669887 TTTCTCTTACACCTGTACAAAAACTTA 57.330 29.630 0.00 0.00 0.00 2.24
456 457 9.841295 TTCTCTTACACCTGTACAAAAACTTAT 57.159 29.630 0.00 0.00 0.00 1.73
944 947 0.682852 CACTACCCTTTCCGTCCACA 59.317 55.000 0.00 0.00 0.00 4.17
982 992 3.659092 CAAGCGGCGGCAGTCAAA 61.659 61.111 19.21 0.00 43.41 2.69
984 996 2.268076 AAGCGGCGGCAGTCAAATT 61.268 52.632 19.21 0.00 43.41 1.82
995 1007 2.413371 GCAGTCAAATTGAACTCGAGCC 60.413 50.000 13.61 5.33 0.00 4.70
996 1008 2.807967 CAGTCAAATTGAACTCGAGCCA 59.192 45.455 13.61 8.25 0.00 4.75
1003 1015 1.939974 TGAACTCGAGCCACATATGC 58.060 50.000 13.61 0.00 0.00 3.14
1249 1261 4.816984 TCCTCGACCTCCCCGCTC 62.817 72.222 0.00 0.00 0.00 5.03
1707 1719 2.867368 AGTTTCGTGCATTGTTCGTGTA 59.133 40.909 0.00 0.00 0.00 2.90
1755 1767 2.731571 GGCTCAGGTACATGCCCGA 61.732 63.158 1.79 0.00 39.49 5.14
1818 1830 2.911723 CTCGCTTGTTTCTCTGTACTCG 59.088 50.000 0.00 0.00 0.00 4.18
1854 1866 2.488153 GGATTGTGCTTACCAGGTGTTC 59.512 50.000 0.76 0.00 0.00 3.18
1995 2007 5.338137 CCGTCCTAACTTCATTACCTTCCTT 60.338 44.000 0.00 0.00 0.00 3.36
2418 2430 4.355720 TGGCTTGAGGCTGCAGGG 62.356 66.667 17.12 0.00 41.69 4.45
2765 2777 0.168128 CGATTCCACCGGTTTGAAGC 59.832 55.000 17.73 17.73 0.00 3.86
2947 2966 8.303876 ACGAGTCATAAAGTTTATTTTGGCATT 58.696 29.630 5.34 0.00 0.00 3.56
3041 3060 8.689061 TGAAACAATTCTTGGATATGGAAGATG 58.311 33.333 0.00 0.00 36.48 2.90
3055 3074 2.104792 GGAAGATGGCCACATAGTGCTA 59.895 50.000 8.16 0.00 37.47 3.49
3070 3089 9.190317 CACATAGTGCTACTATATATTCAGGGA 57.810 37.037 8.03 0.00 39.26 4.20
3072 3091 6.761099 AGTGCTACTATATATTCAGGGACG 57.239 41.667 0.00 0.00 0.00 4.79
3130 3149 3.889815 ACAATGTACCATGGATCCACTG 58.110 45.455 21.47 15.83 0.00 3.66
3324 3345 1.909700 ATGGGCCACTAAACACACTG 58.090 50.000 9.28 0.00 0.00 3.66
3386 3407 1.331214 CTTTGGCAGACCCATGTGTT 58.669 50.000 0.00 0.00 44.89 3.32
3455 3476 0.531657 TTTCATTCCAATGCCCTGCG 59.468 50.000 0.00 0.00 36.36 5.18
3468 3489 1.338769 GCCCTGCGAGTCCTAAAAGAA 60.339 52.381 0.00 0.00 0.00 2.52
3473 3494 1.732809 GCGAGTCCTAAAAGAACTGCC 59.267 52.381 0.00 0.00 0.00 4.85
3536 3557 4.949856 GGATTGGATGTTGTCACCTGTATT 59.050 41.667 0.00 0.00 0.00 1.89
3561 3582 2.887151 ACTGAAACTGCTGGGCTTAT 57.113 45.000 0.00 0.00 0.00 1.73
3571 3592 2.224378 TGCTGGGCTTATACATGCTCTC 60.224 50.000 0.00 0.00 0.00 3.20
3581 3602 1.539157 ACATGCTCTCGTGAGACAGA 58.461 50.000 18.27 0.00 42.73 3.41
3640 3661 4.870426 TCAATGATTTGACGCTACTTCCTC 59.130 41.667 0.00 0.00 36.94 3.71
3683 3704 9.444600 CTGAGGTATTTAACAAGCTACCTAAAA 57.555 33.333 0.51 0.00 43.07 1.52
3684 3705 9.796180 TGAGGTATTTAACAAGCTACCTAAAAA 57.204 29.630 0.51 0.00 43.07 1.94
3740 3795 3.069300 AGTGATGCAGCATGGTAGAGTAG 59.931 47.826 14.22 0.00 35.86 2.57
3743 3798 3.808466 TGCAGCATGGTAGAGTAGAAG 57.192 47.619 0.00 0.00 35.86 2.85
3755 3810 7.365741 TGGTAGAGTAGAAGTTCTTTACGTTG 58.634 38.462 11.40 0.00 0.00 4.10
3788 3843 5.416271 ACCGTATCTAACACTGTGGAATT 57.584 39.130 13.09 0.03 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.477984 ACAAAGAGCACAATTGTATGATGGT 59.522 36.000 11.53 3.97 35.63 3.55
1 2 5.957798 ACAAAGAGCACAATTGTATGATGG 58.042 37.500 11.53 0.00 35.63 3.51
2 3 6.968904 GGTACAAAGAGCACAATTGTATGATG 59.031 38.462 11.53 8.45 40.47 3.07
3 4 6.886459 AGGTACAAAGAGCACAATTGTATGAT 59.114 34.615 11.53 0.00 40.47 2.45
4 5 6.237901 AGGTACAAAGAGCACAATTGTATGA 58.762 36.000 11.53 0.00 40.47 2.15
5 6 6.403636 GGAGGTACAAAGAGCACAATTGTATG 60.404 42.308 11.53 0.78 40.47 2.39
6 7 5.648092 GGAGGTACAAAGAGCACAATTGTAT 59.352 40.000 11.53 2.69 40.47 2.29
7 8 5.001232 GGAGGTACAAAGAGCACAATTGTA 58.999 41.667 11.53 7.94 38.22 2.41
8 9 3.821033 GGAGGTACAAAGAGCACAATTGT 59.179 43.478 4.92 4.92 40.22 2.71
9 10 3.820467 TGGAGGTACAAAGAGCACAATTG 59.180 43.478 3.24 3.24 0.00 2.32
10 11 4.098914 TGGAGGTACAAAGAGCACAATT 57.901 40.909 0.00 0.00 0.00 2.32
11 12 3.788227 TGGAGGTACAAAGAGCACAAT 57.212 42.857 0.00 0.00 0.00 2.71
12 13 3.211045 GTTGGAGGTACAAAGAGCACAA 58.789 45.455 0.00 0.00 31.17 3.33
13 14 2.171659 TGTTGGAGGTACAAAGAGCACA 59.828 45.455 0.00 0.00 31.17 4.57
14 15 2.548480 GTGTTGGAGGTACAAAGAGCAC 59.452 50.000 0.00 0.00 31.17 4.40
15 16 2.438021 AGTGTTGGAGGTACAAAGAGCA 59.562 45.455 0.00 0.00 31.17 4.26
16 17 2.808543 CAGTGTTGGAGGTACAAAGAGC 59.191 50.000 0.00 0.00 31.17 4.09
17 18 4.336889 TCAGTGTTGGAGGTACAAAGAG 57.663 45.455 0.00 0.00 31.17 2.85
18 19 4.407621 TCTTCAGTGTTGGAGGTACAAAGA 59.592 41.667 0.00 0.00 30.21 2.52
19 20 4.703897 TCTTCAGTGTTGGAGGTACAAAG 58.296 43.478 0.00 0.00 30.21 2.77
20 21 4.764050 TCTTCAGTGTTGGAGGTACAAA 57.236 40.909 0.00 0.00 30.21 2.83
21 22 4.764050 TTCTTCAGTGTTGGAGGTACAA 57.236 40.909 0.00 0.00 30.21 2.41
22 23 4.080807 TGTTTCTTCAGTGTTGGAGGTACA 60.081 41.667 0.00 0.00 30.21 2.90
23 24 4.448210 TGTTTCTTCAGTGTTGGAGGTAC 58.552 43.478 0.00 0.00 30.21 3.34
24 25 4.764050 TGTTTCTTCAGTGTTGGAGGTA 57.236 40.909 0.00 0.00 30.21 3.08
25 26 3.644966 TGTTTCTTCAGTGTTGGAGGT 57.355 42.857 0.00 0.00 30.21 3.85
26 27 3.066760 GGTTGTTTCTTCAGTGTTGGAGG 59.933 47.826 0.00 0.00 30.21 4.30
27 28 3.694072 TGGTTGTTTCTTCAGTGTTGGAG 59.306 43.478 0.00 0.00 0.00 3.86
28 29 3.691575 TGGTTGTTTCTTCAGTGTTGGA 58.308 40.909 0.00 0.00 0.00 3.53
29 30 4.142182 ACATGGTTGTTTCTTCAGTGTTGG 60.142 41.667 0.00 0.00 29.55 3.77
30 31 4.997565 ACATGGTTGTTTCTTCAGTGTTG 58.002 39.130 0.00 0.00 29.55 3.33
31 32 6.959639 ATACATGGTTGTTTCTTCAGTGTT 57.040 33.333 0.00 0.00 37.28 3.32
32 33 6.959639 AATACATGGTTGTTTCTTCAGTGT 57.040 33.333 0.00 0.00 37.28 3.55
33 34 7.202526 ACAAATACATGGTTGTTTCTTCAGTG 58.797 34.615 0.00 0.00 34.29 3.66
34 35 7.346751 ACAAATACATGGTTGTTTCTTCAGT 57.653 32.000 0.00 0.00 34.29 3.41
35 36 8.137437 AGAACAAATACATGGTTGTTTCTTCAG 58.863 33.333 19.25 0.00 45.53 3.02
36 37 7.920151 CAGAACAAATACATGGTTGTTTCTTCA 59.080 33.333 19.25 0.00 45.53 3.02
37 38 7.382218 CCAGAACAAATACATGGTTGTTTCTTC 59.618 37.037 19.25 10.87 45.53 2.87
38 39 7.209475 CCAGAACAAATACATGGTTGTTTCTT 58.791 34.615 19.25 10.11 45.53 2.52
39 40 6.239289 CCCAGAACAAATACATGGTTGTTTCT 60.239 38.462 19.25 15.51 45.53 2.52
40 41 5.925969 CCCAGAACAAATACATGGTTGTTTC 59.074 40.000 19.25 14.20 45.53 2.78
41 42 5.600484 TCCCAGAACAAATACATGGTTGTTT 59.400 36.000 19.25 10.72 45.53 2.83
43 44 4.522789 GTCCCAGAACAAATACATGGTTGT 59.477 41.667 0.00 1.64 39.63 3.32
44 45 4.766891 AGTCCCAGAACAAATACATGGTTG 59.233 41.667 0.00 0.96 0.00 3.77
45 46 4.766891 CAGTCCCAGAACAAATACATGGTT 59.233 41.667 0.00 0.00 0.00 3.67
46 47 4.335416 CAGTCCCAGAACAAATACATGGT 58.665 43.478 0.00 0.00 0.00 3.55
47 48 3.129287 GCAGTCCCAGAACAAATACATGG 59.871 47.826 0.00 0.00 0.00 3.66
48 49 3.758023 TGCAGTCCCAGAACAAATACATG 59.242 43.478 0.00 0.00 0.00 3.21
49 50 4.032960 TGCAGTCCCAGAACAAATACAT 57.967 40.909 0.00 0.00 0.00 2.29
50 51 3.500448 TGCAGTCCCAGAACAAATACA 57.500 42.857 0.00 0.00 0.00 2.29
51 52 3.821033 AGTTGCAGTCCCAGAACAAATAC 59.179 43.478 0.00 0.00 0.00 1.89
52 53 4.098914 AGTTGCAGTCCCAGAACAAATA 57.901 40.909 0.00 0.00 0.00 1.40
53 54 2.949447 AGTTGCAGTCCCAGAACAAAT 58.051 42.857 0.00 0.00 0.00 2.32
54 55 2.435372 AGTTGCAGTCCCAGAACAAA 57.565 45.000 0.00 0.00 0.00 2.83
55 56 2.426738 CAAAGTTGCAGTCCCAGAACAA 59.573 45.455 0.00 0.00 0.00 2.83
56 57 2.023673 CAAAGTTGCAGTCCCAGAACA 58.976 47.619 0.00 0.00 0.00 3.18
57 58 2.781945 CAAAGTTGCAGTCCCAGAAC 57.218 50.000 0.00 0.00 0.00 3.01
69 70 2.919494 GCGGGTGAGGGCAAAGTTG 61.919 63.158 0.00 0.00 0.00 3.16
70 71 2.597510 GCGGGTGAGGGCAAAGTT 60.598 61.111 0.00 0.00 0.00 2.66
71 72 3.570212 AGCGGGTGAGGGCAAAGT 61.570 61.111 0.00 0.00 0.00 2.66
72 73 3.058160 CAGCGGGTGAGGGCAAAG 61.058 66.667 0.00 0.00 0.00 2.77
73 74 4.659172 CCAGCGGGTGAGGGCAAA 62.659 66.667 9.09 0.00 0.00 3.68
81 82 3.583882 AATTGGGTCCCAGCGGGTG 62.584 63.158 11.40 0.00 44.74 4.61
82 83 3.264845 AATTGGGTCCCAGCGGGT 61.265 61.111 11.40 0.00 44.74 5.28
83 84 2.440247 GAATTGGGTCCCAGCGGG 60.440 66.667 11.40 7.24 46.11 6.13
84 85 1.750399 CAGAATTGGGTCCCAGCGG 60.750 63.158 11.40 2.15 33.81 5.52
85 86 0.745845 CTCAGAATTGGGTCCCAGCG 60.746 60.000 11.40 0.00 33.81 5.18
86 87 0.620556 TCTCAGAATTGGGTCCCAGC 59.379 55.000 11.40 5.07 33.81 4.85
87 88 3.439857 TTTCTCAGAATTGGGTCCCAG 57.560 47.619 11.40 0.00 33.81 4.45
88 89 5.732331 ATATTTCTCAGAATTGGGTCCCA 57.268 39.130 6.47 6.47 0.00 4.37
89 90 6.937465 GTCTATATTTCTCAGAATTGGGTCCC 59.063 42.308 0.00 0.00 0.00 4.46
90 91 7.442666 GTGTCTATATTTCTCAGAATTGGGTCC 59.557 40.741 0.00 0.00 0.00 4.46
91 92 7.987458 TGTGTCTATATTTCTCAGAATTGGGTC 59.013 37.037 0.00 0.00 0.00 4.46
92 93 7.861629 TGTGTCTATATTTCTCAGAATTGGGT 58.138 34.615 0.00 0.00 0.00 4.51
93 94 8.206867 TCTGTGTCTATATTTCTCAGAATTGGG 58.793 37.037 0.00 0.00 31.75 4.12
94 95 9.258826 CTCTGTGTCTATATTTCTCAGAATTGG 57.741 37.037 0.00 0.00 33.47 3.16
95 96 9.258826 CCTCTGTGTCTATATTTCTCAGAATTG 57.741 37.037 0.00 0.00 33.47 2.32
96 97 8.986991 ACCTCTGTGTCTATATTTCTCAGAATT 58.013 33.333 0.00 0.00 33.47 2.17
97 98 8.546083 ACCTCTGTGTCTATATTTCTCAGAAT 57.454 34.615 0.00 0.00 33.47 2.40
98 99 7.962995 ACCTCTGTGTCTATATTTCTCAGAA 57.037 36.000 0.00 0.00 33.47 3.02
99 100 8.275758 AGTACCTCTGTGTCTATATTTCTCAGA 58.724 37.037 0.00 0.00 33.06 3.27
100 101 8.458573 AGTACCTCTGTGTCTATATTTCTCAG 57.541 38.462 0.00 0.00 0.00 3.35
101 102 8.824756 AAGTACCTCTGTGTCTATATTTCTCA 57.175 34.615 0.00 0.00 0.00 3.27
102 103 9.127277 AGAAGTACCTCTGTGTCTATATTTCTC 57.873 37.037 0.00 0.00 0.00 2.87
115 116 9.693739 CCTCATCATATATAGAAGTACCTCTGT 57.306 37.037 4.14 0.02 0.00 3.41
116 117 9.693739 ACCTCATCATATATAGAAGTACCTCTG 57.306 37.037 4.14 0.00 0.00 3.35
129 130 9.797642 TTGTGATAGCAAAACCTCATCATATAT 57.202 29.630 0.00 0.00 0.00 0.86
130 131 9.276590 CTTGTGATAGCAAAACCTCATCATATA 57.723 33.333 0.00 0.00 0.00 0.86
131 132 7.255381 GCTTGTGATAGCAAAACCTCATCATAT 60.255 37.037 0.00 0.00 40.89 1.78
132 133 6.038603 GCTTGTGATAGCAAAACCTCATCATA 59.961 38.462 0.00 0.00 40.89 2.15
133 134 5.163581 GCTTGTGATAGCAAAACCTCATCAT 60.164 40.000 0.00 0.00 40.89 2.45
134 135 4.156556 GCTTGTGATAGCAAAACCTCATCA 59.843 41.667 0.00 0.00 40.89 3.07
135 136 4.397417 AGCTTGTGATAGCAAAACCTCATC 59.603 41.667 0.00 0.00 43.68 2.92
136 137 4.338879 AGCTTGTGATAGCAAAACCTCAT 58.661 39.130 0.00 0.00 43.68 2.90
137 138 3.753272 GAGCTTGTGATAGCAAAACCTCA 59.247 43.478 2.00 0.00 43.68 3.86
138 139 4.006319 AGAGCTTGTGATAGCAAAACCTC 58.994 43.478 0.00 0.00 43.68 3.85
139 140 3.755378 CAGAGCTTGTGATAGCAAAACCT 59.245 43.478 0.00 0.00 43.68 3.50
140 141 3.671702 GCAGAGCTTGTGATAGCAAAACC 60.672 47.826 1.31 0.00 43.68 3.27
141 142 3.496155 GCAGAGCTTGTGATAGCAAAAC 58.504 45.455 1.31 0.00 43.68 2.43
142 143 2.489329 GGCAGAGCTTGTGATAGCAAAA 59.511 45.455 1.31 0.00 43.68 2.44
143 144 2.086869 GGCAGAGCTTGTGATAGCAAA 58.913 47.619 1.31 0.00 43.68 3.68
144 145 1.003464 TGGCAGAGCTTGTGATAGCAA 59.997 47.619 1.31 0.00 43.68 3.91
145 146 0.614812 TGGCAGAGCTTGTGATAGCA 59.385 50.000 1.31 0.00 43.68 3.49
146 147 1.399791 GTTGGCAGAGCTTGTGATAGC 59.600 52.381 1.31 0.00 41.53 2.97
147 148 2.012673 GGTTGGCAGAGCTTGTGATAG 58.987 52.381 1.31 0.00 0.00 2.08
148 149 1.630369 AGGTTGGCAGAGCTTGTGATA 59.370 47.619 1.31 0.00 0.00 2.15
149 150 0.403271 AGGTTGGCAGAGCTTGTGAT 59.597 50.000 1.31 0.00 0.00 3.06
150 151 0.250467 GAGGTTGGCAGAGCTTGTGA 60.250 55.000 1.31 0.00 0.00 3.58
151 152 1.239968 GGAGGTTGGCAGAGCTTGTG 61.240 60.000 0.00 0.00 0.00 3.33
152 153 1.073897 GGAGGTTGGCAGAGCTTGT 59.926 57.895 0.00 0.00 0.00 3.16
153 154 0.323178 ATGGAGGTTGGCAGAGCTTG 60.323 55.000 0.00 0.00 0.00 4.01
154 155 0.407139 AATGGAGGTTGGCAGAGCTT 59.593 50.000 0.00 0.00 0.00 3.74
155 156 0.323178 CAATGGAGGTTGGCAGAGCT 60.323 55.000 0.00 0.00 0.00 4.09
156 157 1.941999 GCAATGGAGGTTGGCAGAGC 61.942 60.000 0.00 0.00 0.00 4.09
157 158 2.187073 GCAATGGAGGTTGGCAGAG 58.813 57.895 0.00 0.00 0.00 3.35
158 159 4.421365 GCAATGGAGGTTGGCAGA 57.579 55.556 0.00 0.00 0.00 4.26
170 171 7.369607 TCATAATTACGATTTCCATGGCAATG 58.630 34.615 14.75 9.20 0.00 2.82
171 172 7.448161 TCTCATAATTACGATTTCCATGGCAAT 59.552 33.333 9.56 9.56 0.00 3.56
172 173 6.770303 TCTCATAATTACGATTTCCATGGCAA 59.230 34.615 6.96 2.04 0.00 4.52
173 174 6.295249 TCTCATAATTACGATTTCCATGGCA 58.705 36.000 6.96 0.00 0.00 4.92
174 175 6.801539 TCTCATAATTACGATTTCCATGGC 57.198 37.500 6.96 0.00 0.00 4.40
175 176 7.120285 AGCATCTCATAATTACGATTTCCATGG 59.880 37.037 4.97 4.97 0.00 3.66
176 177 7.961283 CAGCATCTCATAATTACGATTTCCATG 59.039 37.037 0.00 0.00 0.00 3.66
177 178 7.120285 CCAGCATCTCATAATTACGATTTCCAT 59.880 37.037 0.00 0.00 0.00 3.41
178 179 6.427853 CCAGCATCTCATAATTACGATTTCCA 59.572 38.462 0.00 0.00 0.00 3.53
179 180 6.650807 TCCAGCATCTCATAATTACGATTTCC 59.349 38.462 0.00 0.00 0.00 3.13
180 181 7.658179 TCCAGCATCTCATAATTACGATTTC 57.342 36.000 0.00 0.00 0.00 2.17
181 182 8.627208 ATTCCAGCATCTCATAATTACGATTT 57.373 30.769 0.00 0.00 0.00 2.17
182 183 9.896645 ATATTCCAGCATCTCATAATTACGATT 57.103 29.630 0.00 0.00 0.00 3.34
183 184 9.896645 AATATTCCAGCATCTCATAATTACGAT 57.103 29.630 0.00 0.00 0.00 3.73
184 185 9.725019 AAATATTCCAGCATCTCATAATTACGA 57.275 29.630 0.00 0.00 0.00 3.43
185 186 9.764870 CAAATATTCCAGCATCTCATAATTACG 57.235 33.333 0.00 0.00 0.00 3.18
188 189 8.945195 TCCAAATATTCCAGCATCTCATAATT 57.055 30.769 0.00 0.00 0.00 1.40
189 190 9.186837 GATCCAAATATTCCAGCATCTCATAAT 57.813 33.333 0.00 0.00 0.00 1.28
190 191 7.613022 GGATCCAAATATTCCAGCATCTCATAA 59.387 37.037 6.95 0.00 0.00 1.90
191 192 7.114754 GGATCCAAATATTCCAGCATCTCATA 58.885 38.462 6.95 0.00 0.00 2.15
192 193 5.950549 GGATCCAAATATTCCAGCATCTCAT 59.049 40.000 6.95 0.00 0.00 2.90
193 194 5.163066 TGGATCCAAATATTCCAGCATCTCA 60.163 40.000 13.46 0.00 34.65 3.27
194 195 5.319453 TGGATCCAAATATTCCAGCATCTC 58.681 41.667 13.46 0.00 34.65 2.75
195 196 5.329191 TGGATCCAAATATTCCAGCATCT 57.671 39.130 13.46 0.00 34.65 2.90
196 197 5.537674 ACTTGGATCCAAATATTCCAGCATC 59.462 40.000 26.87 0.00 40.48 3.91
197 198 5.461327 ACTTGGATCCAAATATTCCAGCAT 58.539 37.500 26.87 0.00 40.48 3.79
198 199 4.870636 ACTTGGATCCAAATATTCCAGCA 58.129 39.130 26.87 1.36 40.48 4.41
199 200 6.959639 TTACTTGGATCCAAATATTCCAGC 57.040 37.500 26.87 0.00 40.48 4.85
200 201 9.135189 TCATTTACTTGGATCCAAATATTCCAG 57.865 33.333 26.87 15.38 40.48 3.86
201 202 9.486123 TTCATTTACTTGGATCCAAATATTCCA 57.514 29.630 26.87 4.86 37.76 3.53
208 209 9.312904 AGATCTTTTCATTTACTTGGATCCAAA 57.687 29.630 26.87 13.51 35.33 3.28
209 210 8.884124 AGATCTTTTCATTTACTTGGATCCAA 57.116 30.769 25.53 25.53 31.66 3.53
210 211 8.742777 CAAGATCTTTTCATTTACTTGGATCCA 58.257 33.333 11.44 11.44 32.53 3.41
211 212 8.960591 TCAAGATCTTTTCATTTACTTGGATCC 58.039 33.333 4.86 4.20 35.49 3.36
214 215 9.354673 AGTTCAAGATCTTTTCATTTACTTGGA 57.645 29.630 4.86 0.00 35.49 3.53
215 216 9.617975 GAGTTCAAGATCTTTTCATTTACTTGG 57.382 33.333 4.86 0.00 35.49 3.61
216 217 9.617975 GGAGTTCAAGATCTTTTCATTTACTTG 57.382 33.333 4.86 0.00 35.90 3.16
217 218 9.354673 TGGAGTTCAAGATCTTTTCATTTACTT 57.645 29.630 4.86 0.00 0.00 2.24
218 219 8.924511 TGGAGTTCAAGATCTTTTCATTTACT 57.075 30.769 4.86 1.92 0.00 2.24
219 220 9.965824 TTTGGAGTTCAAGATCTTTTCATTTAC 57.034 29.630 4.86 0.00 36.62 2.01
220 221 9.965824 GTTTGGAGTTCAAGATCTTTTCATTTA 57.034 29.630 4.86 0.00 36.62 1.40
221 222 7.928167 GGTTTGGAGTTCAAGATCTTTTCATTT 59.072 33.333 4.86 0.00 36.62 2.32
222 223 7.069826 TGGTTTGGAGTTCAAGATCTTTTCATT 59.930 33.333 4.86 0.00 36.62 2.57
223 224 6.550854 TGGTTTGGAGTTCAAGATCTTTTCAT 59.449 34.615 4.86 0.00 36.62 2.57
224 225 5.890985 TGGTTTGGAGTTCAAGATCTTTTCA 59.109 36.000 4.86 0.00 36.62 2.69
225 226 6.391227 TGGTTTGGAGTTCAAGATCTTTTC 57.609 37.500 4.86 1.69 36.62 2.29
226 227 6.983906 ATGGTTTGGAGTTCAAGATCTTTT 57.016 33.333 4.86 0.00 36.62 2.27
227 228 6.015095 GGAATGGTTTGGAGTTCAAGATCTTT 60.015 38.462 4.86 0.00 36.62 2.52
228 229 5.478332 GGAATGGTTTGGAGTTCAAGATCTT 59.522 40.000 0.88 0.88 36.62 2.40
229 230 5.012893 GGAATGGTTTGGAGTTCAAGATCT 58.987 41.667 0.00 0.00 36.62 2.75
230 231 4.158579 GGGAATGGTTTGGAGTTCAAGATC 59.841 45.833 0.00 0.00 36.62 2.75
231 232 4.089361 GGGAATGGTTTGGAGTTCAAGAT 58.911 43.478 0.00 0.00 36.62 2.40
232 233 3.117322 TGGGAATGGTTTGGAGTTCAAGA 60.117 43.478 0.00 0.00 36.62 3.02
233 234 3.005791 GTGGGAATGGTTTGGAGTTCAAG 59.994 47.826 0.00 0.00 36.62 3.02
234 235 2.962421 GTGGGAATGGTTTGGAGTTCAA 59.038 45.455 0.00 0.00 0.00 2.69
235 236 2.176798 AGTGGGAATGGTTTGGAGTTCA 59.823 45.455 0.00 0.00 0.00 3.18
236 237 2.876581 AGTGGGAATGGTTTGGAGTTC 58.123 47.619 0.00 0.00 0.00 3.01
237 238 3.230976 GAAGTGGGAATGGTTTGGAGTT 58.769 45.455 0.00 0.00 0.00 3.01
238 239 2.176798 TGAAGTGGGAATGGTTTGGAGT 59.823 45.455 0.00 0.00 0.00 3.85
239 240 2.558359 GTGAAGTGGGAATGGTTTGGAG 59.442 50.000 0.00 0.00 0.00 3.86
240 241 2.176798 AGTGAAGTGGGAATGGTTTGGA 59.823 45.455 0.00 0.00 0.00 3.53
241 242 2.558359 GAGTGAAGTGGGAATGGTTTGG 59.442 50.000 0.00 0.00 0.00 3.28
242 243 3.221771 TGAGTGAAGTGGGAATGGTTTG 58.778 45.455 0.00 0.00 0.00 2.93
243 244 3.593442 TGAGTGAAGTGGGAATGGTTT 57.407 42.857 0.00 0.00 0.00 3.27
244 245 3.424703 CATGAGTGAAGTGGGAATGGTT 58.575 45.455 0.00 0.00 0.00 3.67
245 246 2.291153 CCATGAGTGAAGTGGGAATGGT 60.291 50.000 0.00 0.00 0.00 3.55
246 247 2.025981 TCCATGAGTGAAGTGGGAATGG 60.026 50.000 0.00 0.00 35.47 3.16
247 248 3.354948 TCCATGAGTGAAGTGGGAATG 57.645 47.619 0.00 0.00 33.78 2.67
248 249 4.387026 TTTCCATGAGTGAAGTGGGAAT 57.613 40.909 0.00 0.00 34.65 3.01
249 250 3.874383 TTTCCATGAGTGAAGTGGGAA 57.126 42.857 0.00 0.00 33.78 3.97
250 251 3.754965 CTTTTCCATGAGTGAAGTGGGA 58.245 45.455 0.00 0.00 33.78 4.37
251 252 2.229784 GCTTTTCCATGAGTGAAGTGGG 59.770 50.000 0.00 0.00 33.78 4.61
252 253 2.886523 TGCTTTTCCATGAGTGAAGTGG 59.113 45.455 0.00 0.00 0.00 4.00
253 254 4.482386 CATGCTTTTCCATGAGTGAAGTG 58.518 43.478 0.00 0.00 44.12 3.16
254 255 3.057033 GCATGCTTTTCCATGAGTGAAGT 60.057 43.478 11.37 0.00 44.12 3.01
255 256 3.192844 AGCATGCTTTTCCATGAGTGAAG 59.807 43.478 16.30 0.00 44.12 3.02
256 257 3.057104 CAGCATGCTTTTCCATGAGTGAA 60.057 43.478 19.98 0.00 44.12 3.18
257 258 2.490509 CAGCATGCTTTTCCATGAGTGA 59.509 45.455 19.98 0.00 44.12 3.41
258 259 2.490509 TCAGCATGCTTTTCCATGAGTG 59.509 45.455 19.98 2.86 44.12 3.51
259 260 2.753452 CTCAGCATGCTTTTCCATGAGT 59.247 45.455 19.98 0.00 44.12 3.41
260 261 3.014623 TCTCAGCATGCTTTTCCATGAG 58.985 45.455 19.98 19.66 44.12 2.90
261 262 3.076079 TCTCAGCATGCTTTTCCATGA 57.924 42.857 19.98 10.46 44.12 3.07
262 263 3.861276 TTCTCAGCATGCTTTTCCATG 57.139 42.857 19.98 5.93 44.18 3.66
263 264 3.366679 CGTTTCTCAGCATGCTTTTCCAT 60.367 43.478 19.98 0.00 34.76 3.41
264 265 2.030893 CGTTTCTCAGCATGCTTTTCCA 60.031 45.455 19.98 0.00 34.76 3.53
265 266 2.226437 TCGTTTCTCAGCATGCTTTTCC 59.774 45.455 19.98 3.14 34.76 3.13
266 267 3.229552 GTCGTTTCTCAGCATGCTTTTC 58.770 45.455 19.98 4.85 34.76 2.29
267 268 2.030805 GGTCGTTTCTCAGCATGCTTTT 60.031 45.455 19.98 0.00 34.76 2.27
268 269 1.537202 GGTCGTTTCTCAGCATGCTTT 59.463 47.619 19.98 0.00 34.76 3.51
269 270 1.160137 GGTCGTTTCTCAGCATGCTT 58.840 50.000 19.98 0.00 34.76 3.91
270 271 0.322975 AGGTCGTTTCTCAGCATGCT 59.677 50.000 16.30 16.30 34.76 3.79
271 272 1.661112 GTAGGTCGTTTCTCAGCATGC 59.339 52.381 10.51 10.51 34.76 4.06
272 273 2.926200 CAGTAGGTCGTTTCTCAGCATG 59.074 50.000 0.00 0.00 37.54 4.06
273 274 2.675317 GCAGTAGGTCGTTTCTCAGCAT 60.675 50.000 0.00 0.00 0.00 3.79
274 275 1.336887 GCAGTAGGTCGTTTCTCAGCA 60.337 52.381 0.00 0.00 0.00 4.41
275 276 1.067495 AGCAGTAGGTCGTTTCTCAGC 60.067 52.381 0.00 0.00 0.00 4.26
276 277 4.436242 TTAGCAGTAGGTCGTTTCTCAG 57.564 45.455 0.00 0.00 0.00 3.35
277 278 4.461431 TGATTAGCAGTAGGTCGTTTCTCA 59.539 41.667 0.00 0.00 0.00 3.27
278 279 4.995124 TGATTAGCAGTAGGTCGTTTCTC 58.005 43.478 0.00 0.00 0.00 2.87
279 280 5.401531 TTGATTAGCAGTAGGTCGTTTCT 57.598 39.130 0.00 0.00 0.00 2.52
280 281 5.704217 CTTGATTAGCAGTAGGTCGTTTC 57.296 43.478 0.00 0.00 0.00 2.78
294 295 5.645067 TGTCCTTGATTCTGTGCTTGATTAG 59.355 40.000 0.00 0.00 0.00 1.73
295 296 5.559770 TGTCCTTGATTCTGTGCTTGATTA 58.440 37.500 0.00 0.00 0.00 1.75
296 297 4.401022 TGTCCTTGATTCTGTGCTTGATT 58.599 39.130 0.00 0.00 0.00 2.57
297 298 4.025040 TGTCCTTGATTCTGTGCTTGAT 57.975 40.909 0.00 0.00 0.00 2.57
298 299 3.490439 TGTCCTTGATTCTGTGCTTGA 57.510 42.857 0.00 0.00 0.00 3.02
299 300 4.572985 TTTGTCCTTGATTCTGTGCTTG 57.427 40.909 0.00 0.00 0.00 4.01
300 301 6.660521 TCATATTTGTCCTTGATTCTGTGCTT 59.339 34.615 0.00 0.00 0.00 3.91
301 302 6.182627 TCATATTTGTCCTTGATTCTGTGCT 58.817 36.000 0.00 0.00 0.00 4.40
302 303 6.441093 TCATATTTGTCCTTGATTCTGTGC 57.559 37.500 0.00 0.00 0.00 4.57
303 304 6.971184 GCTTCATATTTGTCCTTGATTCTGTG 59.029 38.462 0.00 0.00 0.00 3.66
304 305 6.888632 AGCTTCATATTTGTCCTTGATTCTGT 59.111 34.615 0.00 0.00 0.00 3.41
305 306 7.282675 AGAGCTTCATATTTGTCCTTGATTCTG 59.717 37.037 0.00 0.00 0.00 3.02
306 307 7.344913 AGAGCTTCATATTTGTCCTTGATTCT 58.655 34.615 0.00 0.00 0.00 2.40
307 308 7.565323 AGAGCTTCATATTTGTCCTTGATTC 57.435 36.000 0.00 0.00 0.00 2.52
308 309 7.833183 AGAAGAGCTTCATATTTGTCCTTGATT 59.167 33.333 12.32 0.00 41.84 2.57
309 310 7.344913 AGAAGAGCTTCATATTTGTCCTTGAT 58.655 34.615 12.32 0.00 41.84 2.57
310 311 6.715280 AGAAGAGCTTCATATTTGTCCTTGA 58.285 36.000 12.32 0.00 41.84 3.02
311 312 6.822676 AGAGAAGAGCTTCATATTTGTCCTTG 59.177 38.462 12.32 0.00 41.84 3.61
312 313 6.956497 AGAGAAGAGCTTCATATTTGTCCTT 58.044 36.000 12.32 0.00 41.84 3.36
313 314 6.155910 TGAGAGAAGAGCTTCATATTTGTCCT 59.844 38.462 12.32 0.00 41.84 3.85
314 315 6.344500 TGAGAGAAGAGCTTCATATTTGTCC 58.656 40.000 12.32 0.00 41.84 4.02
315 316 7.548780 ACTTGAGAGAAGAGCTTCATATTTGTC 59.451 37.037 12.32 0.99 41.84 3.18
316 317 7.393216 ACTTGAGAGAAGAGCTTCATATTTGT 58.607 34.615 12.32 2.61 41.84 2.83
317 318 7.846644 ACTTGAGAGAAGAGCTTCATATTTG 57.153 36.000 12.32 2.08 41.84 2.32
318 319 7.336427 CCAACTTGAGAGAAGAGCTTCATATTT 59.664 37.037 12.32 0.00 41.84 1.40
319 320 6.822676 CCAACTTGAGAGAAGAGCTTCATATT 59.177 38.462 12.32 0.00 41.84 1.28
320 321 6.155910 TCCAACTTGAGAGAAGAGCTTCATAT 59.844 38.462 12.32 0.00 41.84 1.78
321 322 5.481824 TCCAACTTGAGAGAAGAGCTTCATA 59.518 40.000 12.32 0.00 41.84 2.15
322 323 4.285517 TCCAACTTGAGAGAAGAGCTTCAT 59.714 41.667 12.32 0.94 41.84 2.57
323 324 3.643320 TCCAACTTGAGAGAAGAGCTTCA 59.357 43.478 12.32 0.00 41.84 3.02
324 325 4.264460 TCCAACTTGAGAGAAGAGCTTC 57.736 45.455 2.03 2.03 39.78 3.86
325 326 4.906747 ATCCAACTTGAGAGAAGAGCTT 57.093 40.909 0.00 0.00 0.00 3.74
326 327 4.285517 TCAATCCAACTTGAGAGAAGAGCT 59.714 41.667 0.00 0.00 31.65 4.09
327 328 4.573900 TCAATCCAACTTGAGAGAAGAGC 58.426 43.478 0.00 0.00 31.65 4.09
328 329 6.404708 TGATCAATCCAACTTGAGAGAAGAG 58.595 40.000 0.00 0.00 38.47 2.85
329 330 6.364568 TGATCAATCCAACTTGAGAGAAGA 57.635 37.500 0.00 0.00 38.47 2.87
330 331 6.654161 ACTTGATCAATCCAACTTGAGAGAAG 59.346 38.462 8.96 0.00 38.47 2.85
331 332 6.537355 ACTTGATCAATCCAACTTGAGAGAA 58.463 36.000 8.96 0.00 38.47 2.87
332 333 6.119240 ACTTGATCAATCCAACTTGAGAGA 57.881 37.500 8.96 0.00 38.47 3.10
333 334 5.353678 GGACTTGATCAATCCAACTTGAGAG 59.646 44.000 22.04 6.41 38.47 3.20
334 335 5.013495 AGGACTTGATCAATCCAACTTGAGA 59.987 40.000 25.70 0.00 38.47 3.27
335 336 5.251764 AGGACTTGATCAATCCAACTTGAG 58.748 41.667 25.70 9.78 38.47 3.02
336 337 5.246981 AGGACTTGATCAATCCAACTTGA 57.753 39.130 25.70 0.00 39.35 3.02
337 338 6.409704 TCTAGGACTTGATCAATCCAACTTG 58.590 40.000 25.70 14.86 34.73 3.16
338 339 6.627087 TCTAGGACTTGATCAATCCAACTT 57.373 37.500 25.70 14.91 34.73 2.66
339 340 6.821616 ATCTAGGACTTGATCAATCCAACT 57.178 37.500 25.70 16.03 34.73 3.16
340 341 6.238593 GCAATCTAGGACTTGATCAATCCAAC 60.239 42.308 25.70 11.36 34.73 3.77
341 342 5.824624 GCAATCTAGGACTTGATCAATCCAA 59.175 40.000 25.70 16.73 34.73 3.53
342 343 5.104402 TGCAATCTAGGACTTGATCAATCCA 60.104 40.000 25.70 16.43 34.73 3.41
343 344 5.371526 TGCAATCTAGGACTTGATCAATCC 58.628 41.667 20.55 20.55 0.00 3.01
344 345 6.541641 AGTTGCAATCTAGGACTTGATCAATC 59.458 38.462 8.96 8.68 0.00 2.67
345 346 6.318144 CAGTTGCAATCTAGGACTTGATCAAT 59.682 38.462 8.96 0.00 0.00 2.57
346 347 5.645067 CAGTTGCAATCTAGGACTTGATCAA 59.355 40.000 8.12 8.12 0.00 2.57
347 348 5.046376 TCAGTTGCAATCTAGGACTTGATCA 60.046 40.000 0.59 0.00 0.00 2.92
348 349 5.423015 TCAGTTGCAATCTAGGACTTGATC 58.577 41.667 0.59 0.00 0.00 2.92
349 350 5.426689 TCAGTTGCAATCTAGGACTTGAT 57.573 39.130 0.59 0.00 0.00 2.57
350 351 4.890158 TCAGTTGCAATCTAGGACTTGA 57.110 40.909 0.59 0.00 0.00 3.02
351 352 5.426504 AGATCAGTTGCAATCTAGGACTTG 58.573 41.667 0.59 0.00 30.50 3.16
352 353 5.690464 AGATCAGTTGCAATCTAGGACTT 57.310 39.130 0.59 0.00 30.50 3.01
353 354 6.155221 TGTTAGATCAGTTGCAATCTAGGACT 59.845 38.462 0.59 0.00 36.22 3.85
354 355 6.341316 TGTTAGATCAGTTGCAATCTAGGAC 58.659 40.000 0.59 2.90 36.22 3.85
355 356 6.544928 TGTTAGATCAGTTGCAATCTAGGA 57.455 37.500 0.59 0.00 36.22 2.94
356 357 6.765036 ACATGTTAGATCAGTTGCAATCTAGG 59.235 38.462 0.59 0.44 36.22 3.02
357 358 7.783090 ACATGTTAGATCAGTTGCAATCTAG 57.217 36.000 0.59 0.00 36.22 2.43
358 359 7.010460 CGAACATGTTAGATCAGTTGCAATCTA 59.990 37.037 11.95 2.62 34.21 1.98
359 360 6.183360 CGAACATGTTAGATCAGTTGCAATCT 60.183 38.462 11.95 3.73 36.28 2.40
360 361 5.961843 CGAACATGTTAGATCAGTTGCAATC 59.038 40.000 11.95 0.00 0.00 2.67
361 362 5.163723 CCGAACATGTTAGATCAGTTGCAAT 60.164 40.000 18.97 0.00 0.00 3.56
362 363 4.154015 CCGAACATGTTAGATCAGTTGCAA 59.846 41.667 18.97 0.00 0.00 4.08
363 364 3.684305 CCGAACATGTTAGATCAGTTGCA 59.316 43.478 18.97 0.00 0.00 4.08
364 365 3.684788 ACCGAACATGTTAGATCAGTTGC 59.315 43.478 18.97 0.00 0.00 4.17
365 366 5.862924 AACCGAACATGTTAGATCAGTTG 57.137 39.130 18.97 4.18 0.00 3.16
366 367 6.668323 CAAAACCGAACATGTTAGATCAGTT 58.332 36.000 18.97 11.54 0.00 3.16
367 368 5.334879 GCAAAACCGAACATGTTAGATCAGT 60.335 40.000 18.97 6.41 0.00 3.41
368 369 5.088739 GCAAAACCGAACATGTTAGATCAG 58.911 41.667 18.97 5.82 0.00 2.90
369 370 4.759693 AGCAAAACCGAACATGTTAGATCA 59.240 37.500 18.97 0.00 0.00 2.92
370 371 5.296813 AGCAAAACCGAACATGTTAGATC 57.703 39.130 18.97 2.80 0.00 2.75
371 372 6.170506 TCTAGCAAAACCGAACATGTTAGAT 58.829 36.000 18.97 0.00 32.82 1.98
372 373 5.543714 TCTAGCAAAACCGAACATGTTAGA 58.456 37.500 18.97 8.07 34.56 2.10
373 374 5.671329 GCTCTAGCAAAACCGAACATGTTAG 60.671 44.000 11.95 11.63 41.59 2.34
374 375 4.153475 GCTCTAGCAAAACCGAACATGTTA 59.847 41.667 11.95 0.00 41.59 2.41
375 376 3.058224 GCTCTAGCAAAACCGAACATGTT 60.058 43.478 11.78 11.78 41.59 2.71
376 377 2.484264 GCTCTAGCAAAACCGAACATGT 59.516 45.455 0.00 0.00 41.59 3.21
377 378 2.744202 AGCTCTAGCAAAACCGAACATG 59.256 45.455 4.54 0.00 45.16 3.21
378 379 2.744202 CAGCTCTAGCAAAACCGAACAT 59.256 45.455 4.54 0.00 45.16 2.71
379 380 2.143122 CAGCTCTAGCAAAACCGAACA 58.857 47.619 4.54 0.00 45.16 3.18
380 381 1.464997 CCAGCTCTAGCAAAACCGAAC 59.535 52.381 4.54 0.00 45.16 3.95
381 382 1.346395 TCCAGCTCTAGCAAAACCGAA 59.654 47.619 4.54 0.00 45.16 4.30
382 383 0.973632 TCCAGCTCTAGCAAAACCGA 59.026 50.000 4.54 0.00 45.16 4.69
383 384 1.808411 TTCCAGCTCTAGCAAAACCG 58.192 50.000 4.54 0.00 45.16 4.44
384 385 3.119352 CCAATTCCAGCTCTAGCAAAACC 60.119 47.826 4.54 0.00 45.16 3.27
385 386 3.758554 TCCAATTCCAGCTCTAGCAAAAC 59.241 43.478 4.54 0.00 45.16 2.43
386 387 4.032960 TCCAATTCCAGCTCTAGCAAAA 57.967 40.909 4.54 0.00 45.16 2.44
387 388 3.719268 TCCAATTCCAGCTCTAGCAAA 57.281 42.857 4.54 0.00 45.16 3.68
388 389 3.939740 ATCCAATTCCAGCTCTAGCAA 57.060 42.857 4.54 0.00 45.16 3.91
389 390 4.226384 TCTATCCAATTCCAGCTCTAGCA 58.774 43.478 4.54 0.00 45.16 3.49
390 391 4.881019 TCTATCCAATTCCAGCTCTAGC 57.119 45.455 0.00 0.00 42.49 3.42
391 392 6.357579 ACATCTATCCAATTCCAGCTCTAG 57.642 41.667 0.00 0.00 0.00 2.43
392 393 6.753913 AACATCTATCCAATTCCAGCTCTA 57.246 37.500 0.00 0.00 0.00 2.43
393 394 5.643421 AACATCTATCCAATTCCAGCTCT 57.357 39.130 0.00 0.00 0.00 4.09
394 395 5.506982 GCAAACATCTATCCAATTCCAGCTC 60.507 44.000 0.00 0.00 0.00 4.09
395 396 4.340381 GCAAACATCTATCCAATTCCAGCT 59.660 41.667 0.00 0.00 0.00 4.24
396 397 4.340381 AGCAAACATCTATCCAATTCCAGC 59.660 41.667 0.00 0.00 0.00 4.85
397 398 6.461110 AAGCAAACATCTATCCAATTCCAG 57.539 37.500 0.00 0.00 0.00 3.86
398 399 6.664816 AGAAAGCAAACATCTATCCAATTCCA 59.335 34.615 0.00 0.00 0.00 3.53
399 400 7.105241 AGAAAGCAAACATCTATCCAATTCC 57.895 36.000 0.00 0.00 0.00 3.01
400 401 8.866956 CAAAGAAAGCAAACATCTATCCAATTC 58.133 33.333 0.00 0.00 0.00 2.17
401 402 8.370182 ACAAAGAAAGCAAACATCTATCCAATT 58.630 29.630 0.00 0.00 0.00 2.32
402 403 7.899973 ACAAAGAAAGCAAACATCTATCCAAT 58.100 30.769 0.00 0.00 0.00 3.16
403 404 7.288810 ACAAAGAAAGCAAACATCTATCCAA 57.711 32.000 0.00 0.00 0.00 3.53
404 405 6.899393 ACAAAGAAAGCAAACATCTATCCA 57.101 33.333 0.00 0.00 0.00 3.41
405 406 8.593492 AAAACAAAGAAAGCAAACATCTATCC 57.407 30.769 0.00 0.00 0.00 2.59
407 408 9.822185 AGAAAAACAAAGAAAGCAAACATCTAT 57.178 25.926 0.00 0.00 0.00 1.98
408 409 9.301153 GAGAAAAACAAAGAAAGCAAACATCTA 57.699 29.630 0.00 0.00 0.00 1.98
409 410 8.037166 AGAGAAAAACAAAGAAAGCAAACATCT 58.963 29.630 0.00 0.00 0.00 2.90
410 411 8.189709 AGAGAAAAACAAAGAAAGCAAACATC 57.810 30.769 0.00 0.00 0.00 3.06
411 412 8.552083 AAGAGAAAAACAAAGAAAGCAAACAT 57.448 26.923 0.00 0.00 0.00 2.71
412 413 7.961325 AAGAGAAAAACAAAGAAAGCAAACA 57.039 28.000 0.00 0.00 0.00 2.83
413 414 8.921670 TGTAAGAGAAAAACAAAGAAAGCAAAC 58.078 29.630 0.00 0.00 0.00 2.93
414 415 8.921670 GTGTAAGAGAAAAACAAAGAAAGCAAA 58.078 29.630 0.00 0.00 0.00 3.68
415 416 7.544217 GGTGTAAGAGAAAAACAAAGAAAGCAA 59.456 33.333 0.00 0.00 0.00 3.91
416 417 7.033185 GGTGTAAGAGAAAAACAAAGAAAGCA 58.967 34.615 0.00 0.00 0.00 3.91
417 418 7.220875 CAGGTGTAAGAGAAAAACAAAGAAAGC 59.779 37.037 0.00 0.00 0.00 3.51
418 419 8.244113 ACAGGTGTAAGAGAAAAACAAAGAAAG 58.756 33.333 0.00 0.00 0.00 2.62
419 420 8.117813 ACAGGTGTAAGAGAAAAACAAAGAAA 57.882 30.769 0.00 0.00 0.00 2.52
420 421 7.696992 ACAGGTGTAAGAGAAAAACAAAGAA 57.303 32.000 0.00 0.00 0.00 2.52
421 422 7.825270 TGTACAGGTGTAAGAGAAAAACAAAGA 59.175 33.333 0.00 0.00 31.52 2.52
422 423 7.981142 TGTACAGGTGTAAGAGAAAAACAAAG 58.019 34.615 0.00 0.00 31.52 2.77
423 424 7.925043 TGTACAGGTGTAAGAGAAAAACAAA 57.075 32.000 0.00 0.00 31.52 2.83
424 425 7.925043 TTGTACAGGTGTAAGAGAAAAACAA 57.075 32.000 0.00 0.00 31.52 2.83
425 426 7.925043 TTTGTACAGGTGTAAGAGAAAAACA 57.075 32.000 0.00 0.00 31.52 2.83
426 427 9.069078 GTTTTTGTACAGGTGTAAGAGAAAAAC 57.931 33.333 15.84 15.84 34.72 2.43
427 428 9.016438 AGTTTTTGTACAGGTGTAAGAGAAAAA 57.984 29.630 0.00 0.00 31.52 1.94
428 429 8.570068 AGTTTTTGTACAGGTGTAAGAGAAAA 57.430 30.769 0.00 0.00 31.52 2.29
429 430 8.570068 AAGTTTTTGTACAGGTGTAAGAGAAA 57.430 30.769 0.00 0.00 31.52 2.52
430 431 9.841295 ATAAGTTTTTGTACAGGTGTAAGAGAA 57.159 29.630 0.00 0.00 31.52 2.87
894 895 2.017049 GCCGGCATGATTGTTACTCTT 58.983 47.619 24.80 0.00 0.00 2.85
944 947 4.523083 TGAACTTTTTGTGTCTAGGCTGT 58.477 39.130 0.00 0.00 0.00 4.40
982 992 2.874701 GCATATGTGGCTCGAGTTCAAT 59.125 45.455 15.13 6.21 0.00 2.57
984 996 1.473257 GGCATATGTGGCTCGAGTTCA 60.473 52.381 15.13 10.25 46.64 3.18
995 1007 4.562425 ACGGCGGGGGCATATGTG 62.562 66.667 13.24 0.00 0.00 3.21
996 1008 3.804329 AACGGCGGGGGCATATGT 61.804 61.111 13.24 0.00 0.00 2.29
1489 1501 2.029964 GTCAAGAACCGCCGACCA 59.970 61.111 0.00 0.00 0.00 4.02
1707 1719 1.970114 GAGTGTGGCTGCAGCACAT 60.970 57.895 37.63 24.94 44.36 3.21
1746 1758 4.800914 GCTGTCTTTATAGATCGGGCATGT 60.801 45.833 0.00 0.00 31.86 3.21
1818 1830 1.270550 CAATCCACAAGGCCACACTTC 59.729 52.381 5.01 0.00 33.74 3.01
1854 1866 0.034476 TTCTCTCAGGTGCTGCACTG 59.966 55.000 29.54 23.79 34.40 3.66
1995 2007 3.751175 GGCTACATGCTGTGAGTAAACAA 59.249 43.478 0.00 0.00 42.39 2.83
2466 2478 9.023962 ACTTTCTCCAGCACATTATAAATTTCA 57.976 29.630 0.00 0.00 0.00 2.69
2541 2553 4.162320 TCATCTCTGTCCACATCCTTAACC 59.838 45.833 0.00 0.00 0.00 2.85
2765 2777 1.174712 CCCACAAGAGCACAACCCAG 61.175 60.000 0.00 0.00 0.00 4.45
2897 2916 5.065704 TCAGCTTCTGAGTTCACATAGAC 57.934 43.478 0.00 0.00 35.39 2.59
2947 2966 5.651612 ATTGAATCCATCACCTCACCATA 57.348 39.130 0.00 0.00 37.92 2.74
2950 2969 5.665916 AAAATTGAATCCATCACCTCACC 57.334 39.130 0.00 0.00 37.92 4.02
3041 3060 7.782049 TGAATATATAGTAGCACTATGTGGCC 58.218 38.462 15.05 0.00 41.23 5.36
3055 3074 6.948886 AGTCATGTCGTCCCTGAATATATAGT 59.051 38.462 0.00 0.00 0.00 2.12
3070 3089 1.188219 AGGCCACAGAGTCATGTCGT 61.188 55.000 5.01 0.00 0.00 4.34
3072 3091 1.277557 AGAAGGCCACAGAGTCATGTC 59.722 52.381 5.01 0.00 0.00 3.06
3324 3345 3.866651 ACAGTGGAGAGATATGCACAAC 58.133 45.455 2.00 0.00 43.34 3.32
3455 3476 4.500127 GAGAGGCAGTTCTTTTAGGACTC 58.500 47.826 0.00 0.00 0.00 3.36
3468 3489 0.036022 GCTGAAACTGGAGAGGCAGT 59.964 55.000 0.00 0.00 0.00 4.40
3486 3507 7.281991 AGAAATCAATATTTTGCAGTTTCGC 57.718 32.000 11.50 0.00 35.41 4.70
3500 3521 8.814931 ACAACATCCAATCCAAAGAAATCAATA 58.185 29.630 0.00 0.00 0.00 1.90
3536 3557 3.009033 AGCCCAGCAGTTTCAGTATACAA 59.991 43.478 5.50 0.00 0.00 2.41
3561 3582 2.711542 TCTGTCTCACGAGAGCATGTA 58.288 47.619 4.83 0.00 41.81 2.29
3571 3592 3.249091 CTGTTGAAGGATCTGTCTCACG 58.751 50.000 0.00 0.00 0.00 4.35
3603 3624 3.140325 TCATTGAACTGAGGTTGACCC 57.860 47.619 0.00 0.00 35.58 4.46
3640 3661 3.001414 CTCAGTCATTCTTCTGTGCAGG 58.999 50.000 0.00 0.00 33.89 4.85
3683 3704 8.519799 TCACTCAAACTAGTCCAAAGAAATTT 57.480 30.769 0.00 0.00 0.00 1.82
3684 3705 8.697507 ATCACTCAAACTAGTCCAAAGAAATT 57.302 30.769 0.00 0.00 0.00 1.82
3685 3706 7.391833 GGATCACTCAAACTAGTCCAAAGAAAT 59.608 37.037 0.00 0.00 0.00 2.17
3743 3798 8.054236 CGGTTATATCATGACAACGTAAAGAAC 58.946 37.037 0.00 0.00 0.00 3.01
3755 3810 9.343103 CAGTGTTAGATACGGTTATATCATGAC 57.657 37.037 0.00 0.00 34.50 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.