Multiple sequence alignment - TraesCS3D01G233400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G233400 chr3D 100.000 4433 0 0 1 4433 321889401 321884969 0.000000e+00 8187.0
1 TraesCS3D01G233400 chr3D 100.000 2337 0 0 4702 7038 321884700 321882364 0.000000e+00 4316.0
2 TraesCS3D01G233400 chr3D 94.872 312 15 1 378 688 240219079 240219390 2.950000e-133 486.0
3 TraesCS3D01G233400 chr3D 94.000 250 14 1 3 252 113269114 113268866 1.850000e-100 377.0
4 TraesCS3D01G233400 chr3D 93.200 250 16 1 3 252 97882696 97882944 4.010000e-97 366.0
5 TraesCS3D01G233400 chr3D 97.596 208 5 0 3157 3364 351837961 351838168 2.410000e-94 357.0
6 TraesCS3D01G233400 chr3B 94.402 2501 95 21 695 3163 397662138 397664625 0.000000e+00 3801.0
7 TraesCS3D01G233400 chr3B 95.652 2300 58 16 4757 7038 397665906 397668181 0.000000e+00 3655.0
8 TraesCS3D01G233400 chr3B 96.262 1070 28 2 3364 4433 397664623 397665680 0.000000e+00 1744.0
9 TraesCS3D01G233400 chr3B 79.268 246 39 7 3860 4097 42700087 42700328 2.030000e-35 161.0
10 TraesCS3D01G233400 chr3A 93.823 2477 87 25 718 3161 402080900 402083343 0.000000e+00 3666.0
11 TraesCS3D01G233400 chr3A 96.325 1959 46 11 4702 6642 402084457 402086407 0.000000e+00 3195.0
12 TraesCS3D01G233400 chr3A 96.723 1068 30 4 3366 4433 402083345 402084407 0.000000e+00 1773.0
13 TraesCS3D01G233400 chr3A 95.082 244 12 0 6611 6854 402086432 402086675 1.110000e-102 385.0
14 TraesCS3D01G233400 chr3A 99.005 201 2 0 3163 3363 82101636 82101436 1.870000e-95 361.0
15 TraesCS3D01G233400 chr3A 89.474 190 14 4 6849 7038 402087107 402087290 1.180000e-57 235.0
16 TraesCS3D01G233400 chr3A 97.561 41 1 0 330 370 402080764 402080804 3.520000e-08 71.3
17 TraesCS3D01G233400 chr4D 97.097 310 9 0 379 688 363632304 363632613 2.250000e-144 523.0
18 TraesCS3D01G233400 chr4D 93.930 313 18 1 377 688 418889007 418889319 8.260000e-129 472.0
19 TraesCS3D01G233400 chr4D 98.387 62 1 0 271 332 358956957 358957018 7.460000e-20 110.0
20 TraesCS3D01G233400 chr7D 96.774 310 10 0 379 688 100765780 100765471 1.050000e-142 518.0
21 TraesCS3D01G233400 chr7D 96.463 311 11 0 378 688 122645500 122645190 1.350000e-141 514.0
22 TraesCS3D01G233400 chr7D 99.500 200 1 0 3164 3363 219839706 219839507 1.440000e-96 364.0
23 TraesCS3D01G233400 chr7D 98.500 200 3 0 3164 3363 528406982 528407181 3.120000e-93 353.0
24 TraesCS3D01G233400 chr5D 96.463 311 10 1 379 688 417262373 417262683 4.870000e-141 512.0
25 TraesCS3D01G233400 chr5D 99.000 200 2 0 3164 3363 159820456 159820655 6.710000e-95 359.0
26 TraesCS3D01G233400 chr5D 95.522 67 2 1 268 334 413671511 413671576 9.660000e-19 106.0
27 TraesCS3D01G233400 chr5D 96.875 64 1 1 269 332 524501673 524501735 9.660000e-19 106.0
28 TraesCS3D01G233400 chr5D 95.455 66 2 1 267 332 489809784 489809848 3.470000e-18 104.0
29 TraesCS3D01G233400 chr7B 94.969 318 14 2 372 688 178720987 178720671 1.360000e-136 497.0
30 TraesCS3D01G233400 chr4B 94.340 318 16 2 372 688 513872778 513872462 2.950000e-133 486.0
31 TraesCS3D01G233400 chr1B 94.340 318 15 3 372 688 359532645 359532330 1.060000e-132 484.0
32 TraesCS3D01G233400 chr5B 93.976 249 14 1 3 251 430730782 430731029 6.670000e-100 375.0
33 TraesCS3D01G233400 chr4A 94.262 244 13 1 3 246 209758633 209758875 8.620000e-99 372.0
34 TraesCS3D01G233400 chr4A 82.234 197 23 5 3860 4046 683500760 683500954 7.310000e-35 159.0
35 TraesCS3D01G233400 chr6A 93.200 250 16 1 3 252 410378194 410377946 4.010000e-97 366.0
36 TraesCS3D01G233400 chr6A 93.200 250 16 1 3 252 506061204 506060956 4.010000e-97 366.0
37 TraesCS3D01G233400 chr6A 93.200 250 16 1 3 252 542791867 542792115 4.010000e-97 366.0
38 TraesCS3D01G233400 chr5A 93.200 250 16 1 3 252 574986917 574986669 4.010000e-97 366.0
39 TraesCS3D01G233400 chr2D 93.200 250 16 1 3 252 516417049 516416801 4.010000e-97 366.0
40 TraesCS3D01G233400 chr2D 99.500 200 1 0 3164 3363 536454544 536454345 1.440000e-96 364.0
41 TraesCS3D01G233400 chr2D 99.005 201 2 0 3163 3363 9925096 9924896 1.870000e-95 361.0
42 TraesCS3D01G233400 chr2D 86.503 163 8 5 3940 4100 152095894 152095744 4.370000e-37 167.0
43 TraesCS3D01G233400 chr2D 91.139 79 2 3 270 344 623473733 623473656 1.250000e-17 102.0
44 TraesCS3D01G233400 chr1D 98.010 201 3 1 3164 3364 76590661 76590860 1.450000e-91 348.0
45 TraesCS3D01G233400 chr1D 98.010 201 3 1 3164 3364 76600728 76600927 1.450000e-91 348.0
46 TraesCS3D01G233400 chr2B 87.037 162 8 3 3940 4100 210455080 210454931 3.380000e-38 171.0
47 TraesCS3D01G233400 chr6D 96.923 65 1 1 270 333 322457511 322457575 2.680000e-19 108.0
48 TraesCS3D01G233400 chr6D 96.825 63 2 0 270 332 376102277 376102339 9.660000e-19 106.0
49 TraesCS3D01G233400 chr1A 96.875 64 2 0 269 332 582878599 582878662 2.680000e-19 108.0
50 TraesCS3D01G233400 chrUn 96.825 63 2 0 270 332 208673218 208673156 9.660000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G233400 chr3D 321882364 321889401 7037 True 6251.500000 8187 100.000000 1 7038 2 chr3D.!!$R2 7037
1 TraesCS3D01G233400 chr3B 397662138 397668181 6043 False 3066.666667 3801 95.438667 695 7038 3 chr3B.!!$F2 6343
2 TraesCS3D01G233400 chr3A 402080764 402087290 6526 False 1554.216667 3666 94.831333 330 7038 6 chr3A.!!$F1 6708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
377 378 0.036732 TGCCACAAGTTCCTGCTAGG 59.963 55.000 0.00 0.0 36.46 3.02 F
378 379 0.036875 GCCACAAGTTCCTGCTAGGT 59.963 55.000 0.00 0.0 36.53 3.08 F
394 395 0.325390 AGGTACTCCCTCCTTTCCGG 60.325 60.000 0.00 0.0 40.71 5.14 F
1186 1198 0.460987 CCAGATCTCGTTGTCCTGGC 60.461 60.000 0.00 0.0 38.07 4.85 F
2980 3055 0.039618 GCCCCTGGGTTTTCTCATGA 59.960 55.000 12.71 0.0 37.65 3.07 F
3184 3260 0.037139 GCATGATTGGTTTGCTGCCA 60.037 50.000 0.00 0.0 33.61 4.92 F
3286 3362 1.154197 GGCAAGACAACTCGGTAACC 58.846 55.000 0.00 0.0 0.00 2.85 F
4810 4886 1.138671 GAGGCTGCGTGAGAGAGAC 59.861 63.158 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1212 1224 0.521291 GCTGCAGAAACACGCCAATA 59.479 50.000 20.43 0.0 0.00 1.90 R
2323 2367 1.664151 GGGGAGTGAAAGCGAAATACG 59.336 52.381 0.00 0.0 45.66 3.06 R
2386 2431 0.754957 AGAGGGAGAGATCTGTGGCG 60.755 60.000 0.00 0.0 0.00 5.69 R
3165 3241 0.037139 TGGCAGCAAACCAATCATGC 60.037 50.000 0.00 0.0 40.34 4.06 R
4154 4230 1.064017 TGTAATTGGGTCATCAGCCCC 60.064 52.381 0.00 0.0 45.49 5.80 R
4774 4850 1.328680 CTCCGTTCGATTCCATTGCTG 59.671 52.381 0.00 0.0 0.00 4.41 R
5158 5253 3.264193 TGGAAGGTGTCTGAATATGCACT 59.736 43.478 0.00 0.0 32.90 4.40 R
6658 6804 0.318955 GCAAACCTCGCACTGCAAAT 60.319 50.000 1.11 0.0 34.87 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.330271 GTAGTAACATAGCGCATTCCAAG 57.670 43.478 11.47 0.00 0.00 3.61
23 24 4.137116 AGTAACATAGCGCATTCCAAGA 57.863 40.909 11.47 0.00 0.00 3.02
24 25 3.871594 AGTAACATAGCGCATTCCAAGAC 59.128 43.478 11.47 0.00 0.00 3.01
25 26 2.401583 ACATAGCGCATTCCAAGACA 57.598 45.000 11.47 0.00 0.00 3.41
26 27 2.710377 ACATAGCGCATTCCAAGACAA 58.290 42.857 11.47 0.00 0.00 3.18
27 28 2.679837 ACATAGCGCATTCCAAGACAAG 59.320 45.455 11.47 0.00 0.00 3.16
28 29 2.472695 TAGCGCATTCCAAGACAAGT 57.527 45.000 11.47 0.00 0.00 3.16
29 30 1.609208 AGCGCATTCCAAGACAAGTT 58.391 45.000 11.47 0.00 0.00 2.66
30 31 1.956477 AGCGCATTCCAAGACAAGTTT 59.044 42.857 11.47 0.00 0.00 2.66
31 32 2.053627 GCGCATTCCAAGACAAGTTTG 58.946 47.619 0.30 0.00 0.00 2.93
32 33 2.053627 CGCATTCCAAGACAAGTTTGC 58.946 47.619 0.00 0.00 0.00 3.68
33 34 2.287788 CGCATTCCAAGACAAGTTTGCT 60.288 45.455 0.00 0.00 0.00 3.91
34 35 3.721035 GCATTCCAAGACAAGTTTGCTT 58.279 40.909 0.00 0.00 34.82 3.91
35 36 4.556501 CGCATTCCAAGACAAGTTTGCTTA 60.557 41.667 0.00 0.00 32.87 3.09
36 37 5.473039 GCATTCCAAGACAAGTTTGCTTAT 58.527 37.500 0.00 0.00 32.87 1.73
37 38 5.346822 GCATTCCAAGACAAGTTTGCTTATG 59.653 40.000 0.00 0.00 32.87 1.90
38 39 6.449698 CATTCCAAGACAAGTTTGCTTATGT 58.550 36.000 0.00 0.00 32.87 2.29
39 40 5.437289 TCCAAGACAAGTTTGCTTATGTG 57.563 39.130 0.00 0.00 32.87 3.21
40 41 4.278170 TCCAAGACAAGTTTGCTTATGTGG 59.722 41.667 0.00 0.00 32.87 4.17
41 42 3.923017 AGACAAGTTTGCTTATGTGGC 57.077 42.857 0.00 0.00 32.87 5.01
42 43 3.221771 AGACAAGTTTGCTTATGTGGCA 58.778 40.909 0.00 0.00 37.97 4.92
43 44 3.828451 AGACAAGTTTGCTTATGTGGCAT 59.172 39.130 0.00 0.00 39.54 4.40
44 45 5.009631 AGACAAGTTTGCTTATGTGGCATA 58.990 37.500 0.00 0.00 39.54 3.14
45 46 5.653769 AGACAAGTTTGCTTATGTGGCATAT 59.346 36.000 1.41 1.41 39.54 1.78
46 47 6.828273 AGACAAGTTTGCTTATGTGGCATATA 59.172 34.615 0.00 0.00 39.54 0.86
47 48 7.503566 AGACAAGTTTGCTTATGTGGCATATAT 59.496 33.333 4.71 0.00 39.54 0.86
48 49 8.010733 ACAAGTTTGCTTATGTGGCATATATT 57.989 30.769 4.71 0.00 39.54 1.28
49 50 8.477256 ACAAGTTTGCTTATGTGGCATATATTT 58.523 29.630 4.71 0.00 39.54 1.40
50 51 9.964303 CAAGTTTGCTTATGTGGCATATATTTA 57.036 29.630 4.71 0.00 39.54 1.40
56 57 8.959548 TGCTTATGTGGCATATATTTAATGAGG 58.040 33.333 4.71 0.00 34.56 3.86
57 58 9.177608 GCTTATGTGGCATATATTTAATGAGGA 57.822 33.333 4.71 0.00 0.00 3.71
61 62 8.206126 TGTGGCATATATTTAATGAGGAGAGA 57.794 34.615 0.00 0.00 0.00 3.10
62 63 8.316946 TGTGGCATATATTTAATGAGGAGAGAG 58.683 37.037 0.00 0.00 0.00 3.20
63 64 7.768120 GTGGCATATATTTAATGAGGAGAGAGG 59.232 40.741 0.00 0.00 0.00 3.69
64 65 7.459125 TGGCATATATTTAATGAGGAGAGAGGT 59.541 37.037 0.00 0.00 0.00 3.85
65 66 7.768120 GGCATATATTTAATGAGGAGAGAGGTG 59.232 40.741 0.00 0.00 0.00 4.00
66 67 8.317679 GCATATATTTAATGAGGAGAGAGGTGT 58.682 37.037 0.00 0.00 0.00 4.16
69 70 8.970859 ATATTTAATGAGGAGAGAGGTGTTTG 57.029 34.615 0.00 0.00 0.00 2.93
70 71 3.710209 AATGAGGAGAGAGGTGTTTGG 57.290 47.619 0.00 0.00 0.00 3.28
71 72 2.398754 TGAGGAGAGAGGTGTTTGGA 57.601 50.000 0.00 0.00 0.00 3.53
72 73 2.251818 TGAGGAGAGAGGTGTTTGGAG 58.748 52.381 0.00 0.00 0.00 3.86
73 74 2.252714 GAGGAGAGAGGTGTTTGGAGT 58.747 52.381 0.00 0.00 0.00 3.85
74 75 3.181422 TGAGGAGAGAGGTGTTTGGAGTA 60.181 47.826 0.00 0.00 0.00 2.59
75 76 3.833070 GAGGAGAGAGGTGTTTGGAGTAA 59.167 47.826 0.00 0.00 0.00 2.24
76 77 3.579151 AGGAGAGAGGTGTTTGGAGTAAC 59.421 47.826 0.00 0.00 0.00 2.50
77 78 3.323979 GGAGAGAGGTGTTTGGAGTAACA 59.676 47.826 0.00 0.00 35.75 2.41
78 79 4.020128 GGAGAGAGGTGTTTGGAGTAACAT 60.020 45.833 0.00 0.00 39.93 2.71
79 80 5.187186 GGAGAGAGGTGTTTGGAGTAACATA 59.813 44.000 0.00 0.00 39.93 2.29
80 81 6.295688 GGAGAGAGGTGTTTGGAGTAACATAA 60.296 42.308 0.00 0.00 39.93 1.90
81 82 7.259088 AGAGAGGTGTTTGGAGTAACATAAT 57.741 36.000 0.00 0.00 39.93 1.28
82 83 8.375493 AGAGAGGTGTTTGGAGTAACATAATA 57.625 34.615 0.00 0.00 39.93 0.98
83 84 8.993424 AGAGAGGTGTTTGGAGTAACATAATAT 58.007 33.333 0.00 0.00 39.93 1.28
84 85 8.964476 AGAGGTGTTTGGAGTAACATAATATG 57.036 34.615 0.00 0.00 39.93 1.78
105 106 5.594724 TGTTACTGTAACATAACGCAACC 57.405 39.130 25.14 0.31 43.23 3.77
106 107 4.451774 TGTTACTGTAACATAACGCAACCC 59.548 41.667 25.14 0.13 43.23 4.11
107 108 3.128852 ACTGTAACATAACGCAACCCA 57.871 42.857 0.00 0.00 0.00 4.51
108 109 3.478509 ACTGTAACATAACGCAACCCAA 58.521 40.909 0.00 0.00 0.00 4.12
109 110 3.884091 ACTGTAACATAACGCAACCCAAA 59.116 39.130 0.00 0.00 0.00 3.28
110 111 4.338682 ACTGTAACATAACGCAACCCAAAA 59.661 37.500 0.00 0.00 0.00 2.44
111 112 4.608951 TGTAACATAACGCAACCCAAAAC 58.391 39.130 0.00 0.00 0.00 2.43
112 113 3.802948 AACATAACGCAACCCAAAACA 57.197 38.095 0.00 0.00 0.00 2.83
113 114 3.802948 ACATAACGCAACCCAAAACAA 57.197 38.095 0.00 0.00 0.00 2.83
114 115 4.124851 ACATAACGCAACCCAAAACAAA 57.875 36.364 0.00 0.00 0.00 2.83
115 116 4.504858 ACATAACGCAACCCAAAACAAAA 58.495 34.783 0.00 0.00 0.00 2.44
116 117 4.935808 ACATAACGCAACCCAAAACAAAAA 59.064 33.333 0.00 0.00 0.00 1.94
117 118 5.586643 ACATAACGCAACCCAAAACAAAAAT 59.413 32.000 0.00 0.00 0.00 1.82
118 119 4.348198 AACGCAACCCAAAACAAAAATG 57.652 36.364 0.00 0.00 0.00 2.32
119 120 3.600388 ACGCAACCCAAAACAAAAATGA 58.400 36.364 0.00 0.00 0.00 2.57
120 121 3.620821 ACGCAACCCAAAACAAAAATGAG 59.379 39.130 0.00 0.00 0.00 2.90
121 122 3.620821 CGCAACCCAAAACAAAAATGAGT 59.379 39.130 0.00 0.00 0.00 3.41
122 123 4.260172 CGCAACCCAAAACAAAAATGAGTC 60.260 41.667 0.00 0.00 0.00 3.36
123 124 4.875536 GCAACCCAAAACAAAAATGAGTCT 59.124 37.500 0.00 0.00 0.00 3.24
124 125 6.045955 GCAACCCAAAACAAAAATGAGTCTA 58.954 36.000 0.00 0.00 0.00 2.59
125 126 6.705825 GCAACCCAAAACAAAAATGAGTCTAT 59.294 34.615 0.00 0.00 0.00 1.98
126 127 7.870445 GCAACCCAAAACAAAAATGAGTCTATA 59.130 33.333 0.00 0.00 0.00 1.31
127 128 9.757227 CAACCCAAAACAAAAATGAGTCTATAA 57.243 29.630 0.00 0.00 0.00 0.98
160 161 9.445878 AAATGCCATCATCTATGATACTACTTG 57.554 33.333 5.16 0.00 45.23 3.16
161 162 7.544804 TGCCATCATCTATGATACTACTTGT 57.455 36.000 5.16 0.00 45.23 3.16
162 163 8.650143 TGCCATCATCTATGATACTACTTGTA 57.350 34.615 5.16 0.00 45.23 2.41
163 164 9.259832 TGCCATCATCTATGATACTACTTGTAT 57.740 33.333 5.16 0.00 45.23 2.29
193 194 9.502091 ACTTTGCACTATGAAGATAGTAACAAA 57.498 29.630 15.10 15.10 42.55 2.83
194 195 9.979270 CTTTGCACTATGAAGATAGTAACAAAG 57.021 33.333 21.11 21.11 46.53 2.77
195 196 9.719355 TTTGCACTATGAAGATAGTAACAAAGA 57.281 29.630 13.39 1.33 42.55 2.52
196 197 8.703604 TGCACTATGAAGATAGTAACAAAGAC 57.296 34.615 0.00 0.00 42.55 3.01
197 198 8.531982 TGCACTATGAAGATAGTAACAAAGACT 58.468 33.333 0.00 0.00 42.55 3.24
204 205 9.074576 TGAAGATAGTAACAAAGACTAGTGTCA 57.925 33.333 0.00 0.00 45.20 3.58
226 227 7.898014 TCATATGTATGACACTGGTCTAAGT 57.102 36.000 1.90 0.00 44.61 2.24
227 228 8.306313 TCATATGTATGACACTGGTCTAAGTT 57.694 34.615 1.90 0.00 44.61 2.66
228 229 9.416284 TCATATGTATGACACTGGTCTAAGTTA 57.584 33.333 1.90 0.00 44.61 2.24
229 230 9.464714 CATATGTATGACACTGGTCTAAGTTAC 57.535 37.037 0.00 0.00 44.61 2.50
230 231 7.719871 ATGTATGACACTGGTCTAAGTTACT 57.280 36.000 0.00 0.00 44.61 2.24
231 232 7.534723 TGTATGACACTGGTCTAAGTTACTT 57.465 36.000 2.32 2.32 44.61 2.24
232 233 7.600065 TGTATGACACTGGTCTAAGTTACTTC 58.400 38.462 0.00 0.00 44.61 3.01
233 234 5.464030 TGACACTGGTCTAAGTTACTTCC 57.536 43.478 0.00 0.00 44.61 3.46
234 235 4.282703 TGACACTGGTCTAAGTTACTTCCC 59.717 45.833 0.00 1.28 44.61 3.97
235 236 4.228824 ACACTGGTCTAAGTTACTTCCCA 58.771 43.478 0.00 5.95 0.00 4.37
236 237 4.040095 ACACTGGTCTAAGTTACTTCCCAC 59.960 45.833 0.00 0.00 0.00 4.61
237 238 4.283722 CACTGGTCTAAGTTACTTCCCACT 59.716 45.833 0.00 0.00 0.00 4.00
238 239 5.479375 CACTGGTCTAAGTTACTTCCCACTA 59.521 44.000 0.00 0.00 0.00 2.74
239 240 6.154706 CACTGGTCTAAGTTACTTCCCACTAT 59.845 42.308 0.00 0.00 0.00 2.12
240 241 7.341256 CACTGGTCTAAGTTACTTCCCACTATA 59.659 40.741 0.00 0.00 0.00 1.31
241 242 7.897565 ACTGGTCTAAGTTACTTCCCACTATAA 59.102 37.037 0.00 0.00 0.00 0.98
242 243 8.071177 TGGTCTAAGTTACTTCCCACTATAAC 57.929 38.462 0.00 0.00 0.00 1.89
243 244 7.897565 TGGTCTAAGTTACTTCCCACTATAACT 59.102 37.037 0.00 0.00 39.07 2.24
244 245 9.413734 GGTCTAAGTTACTTCCCACTATAACTA 57.586 37.037 0.00 0.00 36.97 2.24
249 250 9.544579 AAGTTACTTCCCACTATAACTAGACTT 57.455 33.333 0.00 0.00 36.97 3.01
252 253 7.585579 ACTTCCCACTATAACTAGACTTAGC 57.414 40.000 0.00 0.00 0.00 3.09
253 254 7.355890 ACTTCCCACTATAACTAGACTTAGCT 58.644 38.462 0.00 0.00 0.00 3.32
254 255 7.285858 ACTTCCCACTATAACTAGACTTAGCTG 59.714 40.741 0.00 0.00 0.00 4.24
255 256 6.907961 TCCCACTATAACTAGACTTAGCTGA 58.092 40.000 0.00 0.00 0.00 4.26
256 257 7.351952 TCCCACTATAACTAGACTTAGCTGAA 58.648 38.462 0.00 0.00 0.00 3.02
257 258 7.284944 TCCCACTATAACTAGACTTAGCTGAAC 59.715 40.741 0.00 0.00 0.00 3.18
258 259 7.285858 CCCACTATAACTAGACTTAGCTGAACT 59.714 40.741 0.00 0.00 0.00 3.01
259 260 8.688151 CCACTATAACTAGACTTAGCTGAACTT 58.312 37.037 0.00 0.00 0.00 2.66
260 261 9.509855 CACTATAACTAGACTTAGCTGAACTTG 57.490 37.037 0.00 0.00 0.00 3.16
261 262 9.245481 ACTATAACTAGACTTAGCTGAACTTGT 57.755 33.333 0.00 0.00 0.00 3.16
265 266 6.391537 ACTAGACTTAGCTGAACTTGTTAGC 58.608 40.000 0.00 0.00 37.71 3.09
266 267 4.238514 AGACTTAGCTGAACTTGTTAGCG 58.761 43.478 0.00 0.00 42.10 4.26
267 268 4.022242 AGACTTAGCTGAACTTGTTAGCGA 60.022 41.667 0.00 0.00 42.10 4.93
268 269 4.822026 ACTTAGCTGAACTTGTTAGCGAT 58.178 39.130 0.00 0.00 42.10 4.58
269 270 4.627467 ACTTAGCTGAACTTGTTAGCGATG 59.373 41.667 0.00 0.00 42.10 3.84
270 271 3.045601 AGCTGAACTTGTTAGCGATGT 57.954 42.857 0.00 0.00 42.10 3.06
271 272 4.188247 AGCTGAACTTGTTAGCGATGTA 57.812 40.909 0.00 0.00 42.10 2.29
272 273 3.927142 AGCTGAACTTGTTAGCGATGTAC 59.073 43.478 0.00 0.00 42.10 2.90
273 274 3.927142 GCTGAACTTGTTAGCGATGTACT 59.073 43.478 0.00 0.00 0.00 2.73
274 275 4.031878 GCTGAACTTGTTAGCGATGTACTC 59.968 45.833 0.00 0.00 0.00 2.59
275 276 4.491676 TGAACTTGTTAGCGATGTACTCC 58.508 43.478 0.00 0.00 0.00 3.85
276 277 3.521947 ACTTGTTAGCGATGTACTCCC 57.478 47.619 0.00 0.00 0.00 4.30
277 278 3.097614 ACTTGTTAGCGATGTACTCCCT 58.902 45.455 0.00 0.00 0.00 4.20
278 279 3.130693 ACTTGTTAGCGATGTACTCCCTC 59.869 47.826 0.00 0.00 0.00 4.30
279 280 3.014304 TGTTAGCGATGTACTCCCTCT 57.986 47.619 0.00 0.00 0.00 3.69
280 281 2.688446 TGTTAGCGATGTACTCCCTCTG 59.312 50.000 0.00 0.00 0.00 3.35
281 282 2.688958 GTTAGCGATGTACTCCCTCTGT 59.311 50.000 0.00 0.00 0.00 3.41
282 283 2.730934 AGCGATGTACTCCCTCTGTA 57.269 50.000 0.00 0.00 0.00 2.74
283 284 3.014304 AGCGATGTACTCCCTCTGTAA 57.986 47.619 0.00 0.00 0.00 2.41
284 285 3.362706 AGCGATGTACTCCCTCTGTAAA 58.637 45.455 0.00 0.00 0.00 2.01
285 286 3.130693 AGCGATGTACTCCCTCTGTAAAC 59.869 47.826 0.00 0.00 0.00 2.01
286 287 3.130693 GCGATGTACTCCCTCTGTAAACT 59.869 47.826 0.00 0.00 0.00 2.66
287 288 4.337555 GCGATGTACTCCCTCTGTAAACTA 59.662 45.833 0.00 0.00 0.00 2.24
288 289 5.163581 GCGATGTACTCCCTCTGTAAACTAA 60.164 44.000 0.00 0.00 0.00 2.24
289 290 6.461231 GCGATGTACTCCCTCTGTAAACTAAT 60.461 42.308 0.00 0.00 0.00 1.73
290 291 7.255381 GCGATGTACTCCCTCTGTAAACTAATA 60.255 40.741 0.00 0.00 0.00 0.98
291 292 8.794553 CGATGTACTCCCTCTGTAAACTAATAT 58.205 37.037 0.00 0.00 0.00 1.28
297 298 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
298 299 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
299 300 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
300 301 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
301 302 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
327 328 8.350852 AGATCACTATATTAGTTTACGGAGGG 57.649 38.462 0.00 0.00 36.76 4.30
328 329 8.168725 AGATCACTATATTAGTTTACGGAGGGA 58.831 37.037 0.00 0.00 36.76 4.20
333 334 9.819754 ACTATATTAGTTTACGGAGGGAGTAAT 57.180 33.333 0.00 0.00 34.86 1.89
370 371 1.476488 ACAAAGTGTGCCACAAGTTCC 59.524 47.619 0.00 0.00 36.74 3.62
372 373 1.392589 AAGTGTGCCACAAGTTCCTG 58.607 50.000 0.00 0.00 36.74 3.86
373 374 1.103398 AGTGTGCCACAAGTTCCTGC 61.103 55.000 0.00 0.00 36.74 4.85
375 376 0.472044 TGTGCCACAAGTTCCTGCTA 59.528 50.000 0.00 0.00 0.00 3.49
376 377 1.160137 GTGCCACAAGTTCCTGCTAG 58.840 55.000 0.00 0.00 0.00 3.42
377 378 0.036732 TGCCACAAGTTCCTGCTAGG 59.963 55.000 0.00 0.00 36.46 3.02
378 379 0.036875 GCCACAAGTTCCTGCTAGGT 59.963 55.000 0.00 0.00 36.53 3.08
379 380 1.278127 GCCACAAGTTCCTGCTAGGTA 59.722 52.381 0.00 0.00 36.53 3.08
380 381 2.935676 GCCACAAGTTCCTGCTAGGTAC 60.936 54.545 0.00 4.52 36.08 3.34
381 382 2.567615 CCACAAGTTCCTGCTAGGTACT 59.432 50.000 8.11 8.11 46.27 2.73
382 383 3.368531 CCACAAGTTCCTGCTAGGTACTC 60.369 52.174 12.48 0.00 43.97 2.59
383 384 2.832733 ACAAGTTCCTGCTAGGTACTCC 59.167 50.000 12.48 0.00 43.97 3.85
384 385 2.162264 AGTTCCTGCTAGGTACTCCC 57.838 55.000 8.11 0.00 41.42 4.30
385 386 1.646977 AGTTCCTGCTAGGTACTCCCT 59.353 52.381 8.11 0.00 41.42 4.20
386 387 2.033372 GTTCCTGCTAGGTACTCCCTC 58.967 57.143 0.00 0.00 44.81 4.30
387 388 0.556747 TCCTGCTAGGTACTCCCTCC 59.443 60.000 0.00 0.00 44.81 4.30
388 389 0.558712 CCTGCTAGGTACTCCCTCCT 59.441 60.000 0.00 0.00 44.81 3.69
389 390 1.062810 CCTGCTAGGTACTCCCTCCTT 60.063 57.143 0.00 0.00 44.81 3.36
390 391 2.627217 CCTGCTAGGTACTCCCTCCTTT 60.627 54.545 0.00 0.00 44.81 3.11
391 392 2.696187 CTGCTAGGTACTCCCTCCTTTC 59.304 54.545 0.00 0.00 44.81 2.62
392 393 2.040939 GCTAGGTACTCCCTCCTTTCC 58.959 57.143 0.00 0.00 44.81 3.13
393 394 2.308690 CTAGGTACTCCCTCCTTTCCG 58.691 57.143 0.00 0.00 44.81 4.30
394 395 0.325390 AGGTACTCCCTCCTTTCCGG 60.325 60.000 0.00 0.00 40.71 5.14
395 396 0.616964 GGTACTCCCTCCTTTCCGGT 60.617 60.000 0.00 0.00 0.00 5.28
396 397 1.273759 GTACTCCCTCCTTTCCGGTT 58.726 55.000 0.00 0.00 0.00 4.44
397 398 1.627329 GTACTCCCTCCTTTCCGGTTT 59.373 52.381 0.00 0.00 0.00 3.27
398 399 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
399 400 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
400 401 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
401 402 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
402 403 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
403 404 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
404 405 2.486727 CCTCCTTTCCGGTTTATAGGGC 60.487 54.545 0.00 0.00 0.00 5.19
405 406 2.438392 CTCCTTTCCGGTTTATAGGGCT 59.562 50.000 0.00 0.00 0.00 5.19
406 407 2.436911 TCCTTTCCGGTTTATAGGGCTC 59.563 50.000 0.00 0.00 0.00 4.70
407 408 2.171870 CCTTTCCGGTTTATAGGGCTCA 59.828 50.000 0.00 0.00 0.00 4.26
408 409 3.371166 CCTTTCCGGTTTATAGGGCTCAA 60.371 47.826 0.00 0.00 0.00 3.02
409 410 4.461198 CTTTCCGGTTTATAGGGCTCAAT 58.539 43.478 0.00 0.00 0.00 2.57
410 411 4.513406 TTCCGGTTTATAGGGCTCAATT 57.487 40.909 0.00 0.00 0.00 2.32
411 412 4.081322 TCCGGTTTATAGGGCTCAATTC 57.919 45.455 0.00 0.00 0.00 2.17
412 413 3.456644 TCCGGTTTATAGGGCTCAATTCA 59.543 43.478 0.00 0.00 0.00 2.57
413 414 4.080243 TCCGGTTTATAGGGCTCAATTCAA 60.080 41.667 0.00 0.00 0.00 2.69
414 415 4.642885 CCGGTTTATAGGGCTCAATTCAAA 59.357 41.667 0.00 0.00 0.00 2.69
415 416 5.126384 CCGGTTTATAGGGCTCAATTCAAAA 59.874 40.000 0.00 0.00 0.00 2.44
416 417 6.350612 CCGGTTTATAGGGCTCAATTCAAAAA 60.351 38.462 0.00 0.00 0.00 1.94
417 418 7.264947 CGGTTTATAGGGCTCAATTCAAAAAT 58.735 34.615 0.00 0.00 0.00 1.82
418 419 7.435192 CGGTTTATAGGGCTCAATTCAAAAATC 59.565 37.037 0.00 0.00 0.00 2.17
419 420 8.478066 GGTTTATAGGGCTCAATTCAAAAATCT 58.522 33.333 0.00 0.00 0.00 2.40
420 421 9.521503 GTTTATAGGGCTCAATTCAAAAATCTC 57.478 33.333 0.00 0.00 0.00 2.75
421 422 8.821686 TTATAGGGCTCAATTCAAAAATCTCA 57.178 30.769 0.00 0.00 0.00 3.27
422 423 5.397142 AGGGCTCAATTCAAAAATCTCAC 57.603 39.130 0.00 0.00 0.00 3.51
423 424 4.221482 AGGGCTCAATTCAAAAATCTCACC 59.779 41.667 0.00 0.00 0.00 4.02
424 425 4.021192 GGGCTCAATTCAAAAATCTCACCA 60.021 41.667 0.00 0.00 0.00 4.17
425 426 5.511202 GGGCTCAATTCAAAAATCTCACCAA 60.511 40.000 0.00 0.00 0.00 3.67
426 427 5.406477 GGCTCAATTCAAAAATCTCACCAAC 59.594 40.000 0.00 0.00 0.00 3.77
427 428 5.406477 GCTCAATTCAAAAATCTCACCAACC 59.594 40.000 0.00 0.00 0.00 3.77
428 429 6.477053 TCAATTCAAAAATCTCACCAACCA 57.523 33.333 0.00 0.00 0.00 3.67
429 430 6.882656 TCAATTCAAAAATCTCACCAACCAA 58.117 32.000 0.00 0.00 0.00 3.67
430 431 6.985645 TCAATTCAAAAATCTCACCAACCAAG 59.014 34.615 0.00 0.00 0.00 3.61
431 432 6.729690 ATTCAAAAATCTCACCAACCAAGA 57.270 33.333 0.00 0.00 0.00 3.02
432 433 6.729690 TTCAAAAATCTCACCAACCAAGAT 57.270 33.333 0.00 0.00 0.00 2.40
433 434 7.831691 TTCAAAAATCTCACCAACCAAGATA 57.168 32.000 0.00 0.00 0.00 1.98
434 435 7.452880 TCAAAAATCTCACCAACCAAGATAG 57.547 36.000 0.00 0.00 0.00 2.08
435 436 7.230747 TCAAAAATCTCACCAACCAAGATAGA 58.769 34.615 0.00 0.00 0.00 1.98
436 437 7.890127 TCAAAAATCTCACCAACCAAGATAGAT 59.110 33.333 0.00 0.00 0.00 1.98
437 438 7.636150 AAAATCTCACCAACCAAGATAGATG 57.364 36.000 0.00 0.00 0.00 2.90
438 439 4.760530 TCTCACCAACCAAGATAGATGG 57.239 45.455 0.00 0.00 43.84 3.51
447 448 3.801698 CCAAGATAGATGGTGAGTGGTG 58.198 50.000 0.00 0.00 33.08 4.17
448 449 3.432749 CCAAGATAGATGGTGAGTGGTGG 60.433 52.174 0.00 0.00 33.08 4.61
449 450 3.404869 AGATAGATGGTGAGTGGTGGA 57.595 47.619 0.00 0.00 0.00 4.02
450 451 3.724478 AGATAGATGGTGAGTGGTGGAA 58.276 45.455 0.00 0.00 0.00 3.53
451 452 4.302067 AGATAGATGGTGAGTGGTGGAAT 58.698 43.478 0.00 0.00 0.00 3.01
452 453 5.467738 AGATAGATGGTGAGTGGTGGAATA 58.532 41.667 0.00 0.00 0.00 1.75
453 454 3.914426 AGATGGTGAGTGGTGGAATAC 57.086 47.619 0.00 0.00 0.00 1.89
454 455 3.454858 AGATGGTGAGTGGTGGAATACT 58.545 45.455 0.00 0.00 0.00 2.12
455 456 3.846588 AGATGGTGAGTGGTGGAATACTT 59.153 43.478 0.00 0.00 0.00 2.24
456 457 4.289672 AGATGGTGAGTGGTGGAATACTTT 59.710 41.667 0.00 0.00 0.00 2.66
457 458 4.447138 TGGTGAGTGGTGGAATACTTTT 57.553 40.909 0.00 0.00 0.00 2.27
458 459 4.798882 TGGTGAGTGGTGGAATACTTTTT 58.201 39.130 0.00 0.00 0.00 1.94
459 460 4.582656 TGGTGAGTGGTGGAATACTTTTTG 59.417 41.667 0.00 0.00 0.00 2.44
460 461 4.583073 GGTGAGTGGTGGAATACTTTTTGT 59.417 41.667 0.00 0.00 0.00 2.83
461 462 5.507315 GGTGAGTGGTGGAATACTTTTTGTG 60.507 44.000 0.00 0.00 0.00 3.33
462 463 4.582656 TGAGTGGTGGAATACTTTTTGTGG 59.417 41.667 0.00 0.00 0.00 4.17
463 464 4.542697 AGTGGTGGAATACTTTTTGTGGT 58.457 39.130 0.00 0.00 0.00 4.16
464 465 4.959839 AGTGGTGGAATACTTTTTGTGGTT 59.040 37.500 0.00 0.00 0.00 3.67
465 466 5.423931 AGTGGTGGAATACTTTTTGTGGTTT 59.576 36.000 0.00 0.00 0.00 3.27
466 467 5.522097 GTGGTGGAATACTTTTTGTGGTTTG 59.478 40.000 0.00 0.00 0.00 2.93
467 468 4.509970 GGTGGAATACTTTTTGTGGTTTGC 59.490 41.667 0.00 0.00 0.00 3.68
468 469 5.112686 GTGGAATACTTTTTGTGGTTTGCA 58.887 37.500 0.00 0.00 0.00 4.08
469 470 5.582665 GTGGAATACTTTTTGTGGTTTGCAA 59.417 36.000 0.00 0.00 0.00 4.08
470 471 6.092807 GTGGAATACTTTTTGTGGTTTGCAAA 59.907 34.615 8.05 8.05 34.47 3.68
471 472 6.655003 TGGAATACTTTTTGTGGTTTGCAAAA 59.345 30.769 14.67 0.00 42.03 2.44
472 473 7.148340 TGGAATACTTTTTGTGGTTTGCAAAAG 60.148 33.333 14.67 7.55 43.70 2.27
473 474 4.418013 ACTTTTTGTGGTTTGCAAAAGC 57.582 36.364 14.67 8.50 43.70 3.51
474 475 3.817647 ACTTTTTGTGGTTTGCAAAAGCA 59.182 34.783 14.67 11.02 43.70 3.91
475 476 3.820777 TTTTGTGGTTTGCAAAAGCAC 57.179 38.095 24.40 24.40 45.76 4.40
476 477 1.731720 TTGTGGTTTGCAAAAGCACC 58.268 45.000 26.30 20.14 45.18 5.01
477 478 0.901124 TGTGGTTTGCAAAAGCACCT 59.099 45.000 26.30 0.00 45.18 4.00
478 479 2.103373 TGTGGTTTGCAAAAGCACCTA 58.897 42.857 26.30 15.06 45.18 3.08
479 480 2.497675 TGTGGTTTGCAAAAGCACCTAA 59.502 40.909 26.30 14.60 45.18 2.69
480 481 3.133721 TGTGGTTTGCAAAAGCACCTAAT 59.866 39.130 26.30 0.00 45.18 1.73
481 482 4.126437 GTGGTTTGCAAAAGCACCTAATT 58.874 39.130 14.67 0.00 41.35 1.40
482 483 5.163405 TGTGGTTTGCAAAAGCACCTAATTA 60.163 36.000 26.30 13.66 45.18 1.40
483 484 5.755861 GTGGTTTGCAAAAGCACCTAATTAA 59.244 36.000 14.67 0.00 41.35 1.40
484 485 6.426633 GTGGTTTGCAAAAGCACCTAATTAAT 59.573 34.615 14.67 0.00 41.35 1.40
485 486 6.426328 TGGTTTGCAAAAGCACCTAATTAATG 59.574 34.615 14.67 0.00 0.00 1.90
486 487 6.306397 GTTTGCAAAAGCACCTAATTAATGC 58.694 36.000 14.67 11.70 39.74 3.56
497 498 7.518161 GCACCTAATTAATGCTTTTGTTTTCC 58.482 34.615 12.17 0.00 36.40 3.13
498 499 7.387673 GCACCTAATTAATGCTTTTGTTTTCCT 59.612 33.333 12.17 0.00 36.40 3.36
499 500 8.925700 CACCTAATTAATGCTTTTGTTTTCCTC 58.074 33.333 0.00 0.00 0.00 3.71
500 501 8.646900 ACCTAATTAATGCTTTTGTTTTCCTCA 58.353 29.630 0.00 0.00 0.00 3.86
501 502 9.487790 CCTAATTAATGCTTTTGTTTTCCTCAA 57.512 29.630 0.00 0.00 0.00 3.02
566 567 7.718272 GCATAAAATACATGCATTGGTCAAT 57.282 32.000 0.00 0.00 46.47 2.57
567 568 8.145316 GCATAAAATACATGCATTGGTCAATT 57.855 30.769 0.00 0.00 46.47 2.32
568 569 8.614346 GCATAAAATACATGCATTGGTCAATTT 58.386 29.630 0.00 0.00 46.47 1.82
571 572 8.851541 AAAATACATGCATTGGTCAATTTTCT 57.148 26.923 0.00 0.00 0.00 2.52
572 573 8.483307 AAATACATGCATTGGTCAATTTTCTC 57.517 30.769 0.00 0.00 0.00 2.87
573 574 5.733620 ACATGCATTGGTCAATTTTCTCT 57.266 34.783 0.00 0.00 0.00 3.10
574 575 6.105397 ACATGCATTGGTCAATTTTCTCTT 57.895 33.333 0.00 0.00 0.00 2.85
575 576 7.230849 ACATGCATTGGTCAATTTTCTCTTA 57.769 32.000 0.00 0.00 0.00 2.10
576 577 7.669427 ACATGCATTGGTCAATTTTCTCTTAA 58.331 30.769 0.00 0.00 0.00 1.85
577 578 8.316214 ACATGCATTGGTCAATTTTCTCTTAAT 58.684 29.630 0.00 0.00 0.00 1.40
578 579 9.806203 CATGCATTGGTCAATTTTCTCTTAATA 57.194 29.630 0.00 0.00 0.00 0.98
579 580 9.807649 ATGCATTGGTCAATTTTCTCTTAATAC 57.192 29.630 0.00 0.00 0.00 1.89
580 581 9.023962 TGCATTGGTCAATTTTCTCTTAATACT 57.976 29.630 0.00 0.00 0.00 2.12
581 582 9.860898 GCATTGGTCAATTTTCTCTTAATACTT 57.139 29.630 0.00 0.00 0.00 2.24
622 623 6.577103 TGCACCTTAAAATTTGAACATGTGA 58.423 32.000 0.00 0.00 0.00 3.58
624 625 7.171167 TGCACCTTAAAATTTGAACATGTGATG 59.829 33.333 0.00 0.00 0.00 3.07
633 634 9.771915 AAATTTGAACATGTGATGAAAAACAAC 57.228 25.926 0.00 0.00 0.00 3.32
637 638 6.875726 TGAACATGTGATGAAAAACAACCAAA 59.124 30.769 0.00 0.00 0.00 3.28
639 640 7.862512 ACATGTGATGAAAAACAACCAAATT 57.137 28.000 0.00 0.00 0.00 1.82
640 641 7.695820 ACATGTGATGAAAAACAACCAAATTG 58.304 30.769 0.00 0.00 44.60 2.32
641 642 7.551974 ACATGTGATGAAAAACAACCAAATTGA 59.448 29.630 0.00 0.00 41.23 2.57
642 643 7.536895 TGTGATGAAAAACAACCAAATTGAG 57.463 32.000 0.00 0.00 41.23 3.02
643 644 6.036953 TGTGATGAAAAACAACCAAATTGAGC 59.963 34.615 0.00 0.00 41.23 4.26
644 645 5.526846 TGATGAAAAACAACCAAATTGAGCC 59.473 36.000 0.00 0.00 41.23 4.70
646 647 5.495640 TGAAAAACAACCAAATTGAGCCTT 58.504 33.333 0.00 0.00 41.23 4.35
647 648 6.644347 TGAAAAACAACCAAATTGAGCCTTA 58.356 32.000 0.00 0.00 41.23 2.69
648 649 7.278875 TGAAAAACAACCAAATTGAGCCTTAT 58.721 30.769 0.00 0.00 41.23 1.73
649 650 8.424918 TGAAAAACAACCAAATTGAGCCTTATA 58.575 29.630 0.00 0.00 41.23 0.98
650 651 9.267084 GAAAAACAACCAAATTGAGCCTTATAA 57.733 29.630 0.00 0.00 41.23 0.98
651 652 9.620259 AAAAACAACCAAATTGAGCCTTATAAA 57.380 25.926 0.00 0.00 41.23 1.40
652 653 9.620259 AAAACAACCAAATTGAGCCTTATAAAA 57.380 25.926 0.00 0.00 41.23 1.52
653 654 9.791801 AAACAACCAAATTGAGCCTTATAAAAT 57.208 25.926 0.00 0.00 41.23 1.82
729 739 0.984995 GGCAACTCTCCTTAGGTGGT 59.015 55.000 0.00 0.00 34.59 4.16
734 744 1.005687 ACTCTCCTTAGGTGGTACGCT 59.994 52.381 0.00 0.00 39.78 5.07
886 898 1.150135 TCTTGTCCTTGACCTCCTCCT 59.850 52.381 0.00 0.00 0.00 3.69
918 930 0.835941 AGATCAAATCGAGCCTGCCT 59.164 50.000 0.00 0.00 0.00 4.75
919 931 1.211457 AGATCAAATCGAGCCTGCCTT 59.789 47.619 0.00 0.00 0.00 4.35
920 932 1.601430 GATCAAATCGAGCCTGCCTTC 59.399 52.381 0.00 0.00 0.00 3.46
1143 1155 4.423209 ACTGGGCCCCTCCTCTCC 62.423 72.222 22.27 0.00 34.39 3.71
1182 1194 0.461961 CTCCCCAGATCTCGTTGTCC 59.538 60.000 0.00 0.00 0.00 4.02
1186 1198 0.460987 CCAGATCTCGTTGTCCTGGC 60.461 60.000 0.00 0.00 38.07 4.85
1212 1224 2.125912 GCGCTGATCGACTGGTGT 60.126 61.111 0.00 0.00 41.67 4.16
1442 1454 1.973812 GCAGGGGAAGAAGCGCTTT 60.974 57.895 25.84 9.48 36.83 3.51
1488 1500 1.053424 TGGTACCAAGGTGAGGTGTC 58.947 55.000 13.60 0.00 40.26 3.67
1757 1784 5.818136 TCTAATGGCTGCTGTGTTTAATC 57.182 39.130 0.00 0.00 0.00 1.75
1814 1848 3.058293 TCATTTCATGCTGTTCGGTCAAC 60.058 43.478 0.00 0.00 35.28 3.18
1894 1936 9.394477 GTGTAAACCTTCTTCATGTGATTTTAC 57.606 33.333 0.00 7.78 0.00 2.01
1896 1938 6.877611 AACCTTCTTCATGTGATTTTACGT 57.122 33.333 0.00 0.00 0.00 3.57
1974 2016 6.795399 TCTCTGTTGCCTTAAACTTCTTTTG 58.205 36.000 0.00 0.00 0.00 2.44
2001 2043 7.880160 AATGCATTAAGTACTGGCTCATTAA 57.120 32.000 11.02 0.00 0.00 1.40
2014 2056 8.015185 ACTGGCTCATTAATCTTATGCATTTT 57.985 30.769 3.54 0.00 0.00 1.82
2015 2057 7.924412 ACTGGCTCATTAATCTTATGCATTTTG 59.076 33.333 3.54 0.00 0.00 2.44
2037 2079 3.188254 GCAGTTGCATATGTGTGTGTGTA 59.812 43.478 4.29 0.00 41.59 2.90
2039 2081 5.064579 GCAGTTGCATATGTGTGTGTGTATA 59.935 40.000 4.29 0.00 41.59 1.47
2270 2314 1.296715 GGGGTATATGGAGCAGCGG 59.703 63.158 0.00 0.00 0.00 5.52
2286 2330 1.202758 AGCGGTTCACATTGTTGGAGA 60.203 47.619 0.00 0.00 0.00 3.71
2287 2331 1.606668 GCGGTTCACATTGTTGGAGAA 59.393 47.619 0.00 0.00 0.00 2.87
2323 2367 0.730840 CCGCCGATAAGTGGGAAAAC 59.269 55.000 0.00 0.00 33.54 2.43
2386 2431 1.205893 CTCTGCCTCCACTTACTCCAC 59.794 57.143 0.00 0.00 0.00 4.02
2491 2550 1.386525 ATCGCTGCCGGCAAATCATT 61.387 50.000 32.09 10.50 41.91 2.57
2492 2551 1.587088 CGCTGCCGGCAAATCATTC 60.587 57.895 32.09 11.91 41.91 2.67
2493 2552 1.227060 GCTGCCGGCAAATCATTCC 60.227 57.895 32.09 7.37 41.35 3.01
2494 2553 1.669999 GCTGCCGGCAAATCATTCCT 61.670 55.000 32.09 0.00 41.35 3.36
2495 2554 0.101759 CTGCCGGCAAATCATTCCTG 59.898 55.000 32.09 10.83 0.00 3.86
2496 2555 1.321805 TGCCGGCAAATCATTCCTGG 61.322 55.000 30.74 0.00 0.00 4.45
2497 2556 1.037030 GCCGGCAAATCATTCCTGGA 61.037 55.000 24.80 0.00 0.00 3.86
2498 2557 1.027357 CCGGCAAATCATTCCTGGAG 58.973 55.000 0.00 0.00 0.00 3.86
2499 2558 0.383231 CGGCAAATCATTCCTGGAGC 59.617 55.000 0.00 0.00 0.00 4.70
2500 2559 1.772836 GGCAAATCATTCCTGGAGCT 58.227 50.000 0.00 0.00 0.00 4.09
2501 2560 1.680207 GGCAAATCATTCCTGGAGCTC 59.320 52.381 4.71 4.71 0.00 4.09
2502 2561 2.652590 GCAAATCATTCCTGGAGCTCT 58.347 47.619 14.64 0.00 0.00 4.09
2526 2585 1.139853 GCATCTTTGACGATCCTCCCT 59.860 52.381 0.00 0.00 0.00 4.20
2980 3055 0.039618 GCCCCTGGGTTTTCTCATGA 59.960 55.000 12.71 0.00 37.65 3.07
3014 3089 0.816373 GGAGGTGGAGACGGTAGTTC 59.184 60.000 0.00 0.00 0.00 3.01
3067 3143 6.664816 AGATAGAGAATTCAGGGAGATGCTAG 59.335 42.308 8.44 0.00 0.00 3.42
3091 3167 3.130160 GGCTCAAAGCTCTGGCCG 61.130 66.667 4.11 0.00 41.99 6.13
3135 3211 5.221382 CCAGATGCTATTTTATTTGGCTGCT 60.221 40.000 0.00 0.00 0.00 4.24
3161 3237 1.952102 TACCACGAACCGGGAGATGC 61.952 60.000 6.32 0.00 28.17 3.91
3162 3238 2.579201 CACGAACCGGGAGATGCT 59.421 61.111 6.32 0.00 28.17 3.79
3163 3239 1.811266 CACGAACCGGGAGATGCTG 60.811 63.158 6.32 0.00 28.17 4.41
3164 3240 1.982395 ACGAACCGGGAGATGCTGA 60.982 57.895 6.32 0.00 0.00 4.26
3165 3241 1.227089 CGAACCGGGAGATGCTGAG 60.227 63.158 6.32 0.00 0.00 3.35
3166 3242 1.522580 GAACCGGGAGATGCTGAGC 60.523 63.158 6.32 0.00 0.00 4.26
3167 3243 2.244117 GAACCGGGAGATGCTGAGCA 62.244 60.000 10.59 10.59 44.86 4.26
3179 3255 1.067425 TGCTGAGCATGATTGGTTTGC 60.067 47.619 1.40 0.00 31.71 3.68
3181 3257 2.876091 CTGAGCATGATTGGTTTGCTG 58.124 47.619 0.00 0.00 46.21 4.41
3182 3258 1.067425 TGAGCATGATTGGTTTGCTGC 60.067 47.619 0.00 0.00 46.21 5.25
3183 3259 0.248289 AGCATGATTGGTTTGCTGCC 59.752 50.000 0.00 0.00 44.63 4.85
3184 3260 0.037139 GCATGATTGGTTTGCTGCCA 60.037 50.000 0.00 0.00 33.61 4.92
3185 3261 5.726000 GAGCATGATTGGTTTGCTGCCAA 62.726 47.826 0.00 9.04 46.21 4.52
3243 3319 3.658757 GCAATACCAAGACTTGCCAAA 57.341 42.857 9.85 0.00 39.42 3.28
3244 3320 4.192429 GCAATACCAAGACTTGCCAAAT 57.808 40.909 9.85 0.00 39.42 2.32
3245 3321 5.323371 GCAATACCAAGACTTGCCAAATA 57.677 39.130 9.85 0.00 39.42 1.40
3246 3322 5.906073 GCAATACCAAGACTTGCCAAATAT 58.094 37.500 9.85 0.19 39.42 1.28
3247 3323 6.340522 GCAATACCAAGACTTGCCAAATATT 58.659 36.000 9.85 5.64 39.42 1.28
3248 3324 6.256321 GCAATACCAAGACTTGCCAAATATTG 59.744 38.462 9.85 15.61 39.42 1.90
3269 3345 7.573968 ATTGGAAACTTTATGTGAGATAGGC 57.426 36.000 0.00 0.00 0.00 3.93
3270 3346 6.061022 TGGAAACTTTATGTGAGATAGGCA 57.939 37.500 0.00 0.00 0.00 4.75
3271 3347 6.480763 TGGAAACTTTATGTGAGATAGGCAA 58.519 36.000 0.00 0.00 0.00 4.52
3272 3348 6.599244 TGGAAACTTTATGTGAGATAGGCAAG 59.401 38.462 0.00 0.00 0.00 4.01
3273 3349 6.823689 GGAAACTTTATGTGAGATAGGCAAGA 59.176 38.462 0.00 0.00 0.00 3.02
3274 3350 7.201652 GGAAACTTTATGTGAGATAGGCAAGAC 60.202 40.741 0.00 0.00 0.00 3.01
3275 3351 6.299805 ACTTTATGTGAGATAGGCAAGACA 57.700 37.500 0.00 0.00 0.00 3.41
3276 3352 6.711277 ACTTTATGTGAGATAGGCAAGACAA 58.289 36.000 0.00 0.00 0.00 3.18
3277 3353 6.595716 ACTTTATGTGAGATAGGCAAGACAAC 59.404 38.462 0.00 0.00 0.00 3.32
3278 3354 4.833478 ATGTGAGATAGGCAAGACAACT 57.167 40.909 0.00 0.00 0.00 3.16
3279 3355 4.193826 TGTGAGATAGGCAAGACAACTC 57.806 45.455 0.00 0.00 0.00 3.01
3280 3356 3.182967 GTGAGATAGGCAAGACAACTCG 58.817 50.000 0.00 0.00 0.00 4.18
3281 3357 2.166459 TGAGATAGGCAAGACAACTCGG 59.834 50.000 0.00 0.00 0.00 4.63
3282 3358 2.166664 GAGATAGGCAAGACAACTCGGT 59.833 50.000 0.00 0.00 0.00 4.69
3283 3359 3.362706 AGATAGGCAAGACAACTCGGTA 58.637 45.455 0.00 0.00 0.00 4.02
3284 3360 3.767673 AGATAGGCAAGACAACTCGGTAA 59.232 43.478 0.00 0.00 0.00 2.85
3285 3361 2.165319 AGGCAAGACAACTCGGTAAC 57.835 50.000 0.00 0.00 0.00 2.50
3286 3362 1.154197 GGCAAGACAACTCGGTAACC 58.846 55.000 0.00 0.00 0.00 2.85
3287 3363 1.541670 GGCAAGACAACTCGGTAACCA 60.542 52.381 0.00 0.00 0.00 3.67
3288 3364 2.215196 GCAAGACAACTCGGTAACCAA 58.785 47.619 0.00 0.00 0.00 3.67
3289 3365 2.032290 GCAAGACAACTCGGTAACCAAC 60.032 50.000 0.00 0.00 0.00 3.77
3290 3366 2.538512 AGACAACTCGGTAACCAACC 57.461 50.000 0.00 0.00 45.77 3.77
3295 3371 3.134442 ACAACTCGGTAACCAACCAAGTA 59.866 43.478 0.00 0.00 45.23 2.24
3296 3372 3.672767 ACTCGGTAACCAACCAAGTAG 57.327 47.619 0.00 0.00 44.09 2.57
3297 3373 2.967887 ACTCGGTAACCAACCAAGTAGT 59.032 45.455 0.00 0.00 44.09 2.73
3298 3374 4.151883 ACTCGGTAACCAACCAAGTAGTA 58.848 43.478 0.00 0.00 44.09 1.82
3299 3375 4.219288 ACTCGGTAACCAACCAAGTAGTAG 59.781 45.833 0.00 0.00 44.09 2.57
3300 3376 7.295033 ACTCGGTAACCAACCAAGTAGTAGC 62.295 48.000 0.00 0.00 44.09 3.58
3302 3378 4.178545 GTAACCAACCAAGTAGTAGCGA 57.821 45.455 0.00 0.00 0.00 4.93
3303 3379 3.756933 AACCAACCAAGTAGTAGCGAA 57.243 42.857 0.00 0.00 0.00 4.70
3304 3380 3.975168 ACCAACCAAGTAGTAGCGAAT 57.025 42.857 0.00 0.00 0.00 3.34
3305 3381 5.410355 AACCAACCAAGTAGTAGCGAATA 57.590 39.130 0.00 0.00 0.00 1.75
3306 3382 5.609533 ACCAACCAAGTAGTAGCGAATAT 57.390 39.130 0.00 0.00 0.00 1.28
3307 3383 5.985911 ACCAACCAAGTAGTAGCGAATATT 58.014 37.500 0.00 0.00 0.00 1.28
3308 3384 6.412214 ACCAACCAAGTAGTAGCGAATATTT 58.588 36.000 0.00 0.00 0.00 1.40
3309 3385 6.315393 ACCAACCAAGTAGTAGCGAATATTTG 59.685 38.462 3.21 3.21 0.00 2.32
3310 3386 6.238374 CCAACCAAGTAGTAGCGAATATTTGG 60.238 42.308 21.14 21.14 41.83 3.28
3311 3387 4.814771 ACCAAGTAGTAGCGAATATTTGGC 59.185 41.667 22.17 4.77 40.54 4.52
3312 3388 4.814234 CCAAGTAGTAGCGAATATTTGGCA 59.186 41.667 13.77 0.00 33.65 4.92
3313 3389 5.277345 CCAAGTAGTAGCGAATATTTGGCAC 60.277 44.000 13.77 9.53 33.65 5.01
3314 3390 5.018539 AGTAGTAGCGAATATTTGGCACA 57.981 39.130 13.01 0.00 36.79 4.57
3338 3414 3.547054 CCAAACATTGGCATGCCTATT 57.453 42.857 35.53 21.02 45.17 1.73
3339 3415 3.876341 CCAAACATTGGCATGCCTATTT 58.124 40.909 35.53 24.23 45.17 1.40
3340 3416 4.263435 CCAAACATTGGCATGCCTATTTT 58.737 39.130 35.53 28.10 45.17 1.82
3341 3417 4.701171 CCAAACATTGGCATGCCTATTTTT 59.299 37.500 35.53 31.39 45.17 1.94
3342 3418 5.392165 CCAAACATTGGCATGCCTATTTTTG 60.392 40.000 38.23 38.23 45.17 2.44
3343 3419 4.822685 ACATTGGCATGCCTATTTTTGA 57.177 36.364 35.53 11.81 36.94 2.69
3344 3420 4.506758 ACATTGGCATGCCTATTTTTGAC 58.493 39.130 35.53 7.29 36.94 3.18
3345 3421 4.020396 ACATTGGCATGCCTATTTTTGACA 60.020 37.500 35.53 10.21 36.94 3.58
3346 3422 3.591196 TGGCATGCCTATTTTTGACAC 57.409 42.857 35.53 6.54 36.94 3.67
3347 3423 2.233431 TGGCATGCCTATTTTTGACACC 59.767 45.455 35.53 6.08 36.94 4.16
3348 3424 2.233431 GGCATGCCTATTTTTGACACCA 59.767 45.455 29.98 0.00 0.00 4.17
3349 3425 3.306641 GGCATGCCTATTTTTGACACCAA 60.307 43.478 29.98 0.00 0.00 3.67
3350 3426 4.314121 GCATGCCTATTTTTGACACCAAA 58.686 39.130 6.36 0.00 40.24 3.28
3351 3427 4.152223 GCATGCCTATTTTTGACACCAAAC 59.848 41.667 6.36 0.00 41.54 2.93
3352 3428 4.329462 TGCCTATTTTTGACACCAAACC 57.671 40.909 0.00 0.00 41.54 3.27
3353 3429 3.706594 TGCCTATTTTTGACACCAAACCA 59.293 39.130 0.00 0.00 41.54 3.67
3354 3430 4.162320 TGCCTATTTTTGACACCAAACCAA 59.838 37.500 0.00 0.00 41.54 3.67
3355 3431 5.163258 TGCCTATTTTTGACACCAAACCAAT 60.163 36.000 0.00 0.00 41.54 3.16
3356 3432 5.762711 GCCTATTTTTGACACCAAACCAATT 59.237 36.000 0.00 0.00 41.54 2.32
3357 3433 6.931840 GCCTATTTTTGACACCAAACCAATTA 59.068 34.615 0.00 0.00 41.54 1.40
3358 3434 7.606073 GCCTATTTTTGACACCAAACCAATTAT 59.394 33.333 0.00 0.00 41.54 1.28
3359 3435 8.934825 CCTATTTTTGACACCAAACCAATTATG 58.065 33.333 0.00 0.00 41.54 1.90
3360 3436 6.610741 TTTTTGACACCAAACCAATTATGC 57.389 33.333 0.00 0.00 41.54 3.14
3361 3437 5.543507 TTTGACACCAAACCAATTATGCT 57.456 34.783 0.00 0.00 37.36 3.79
3362 3438 4.782019 TGACACCAAACCAATTATGCTC 57.218 40.909 0.00 0.00 0.00 4.26
3374 3450 7.744087 ACCAATTATGCTCGCTATTTTATCA 57.256 32.000 0.00 0.00 0.00 2.15
3430 3506 1.566018 GAGGCAACCGAACGGAACAG 61.566 60.000 20.14 7.31 38.96 3.16
3438 3514 4.295119 AACGGAACAGCGCTCGGT 62.295 61.111 18.74 10.85 0.00 4.69
3808 3884 5.233050 CGTGCCAAATTTTGTTGATTACACA 59.767 36.000 8.26 0.00 36.21 3.72
4110 4186 1.897133 ACACCCTAATCGCAGTGTGTA 59.103 47.619 3.13 0.00 41.69 2.90
4154 4230 3.307782 GGTTACGTGACCCACATAAATCG 59.692 47.826 18.38 0.00 33.40 3.34
4195 4271 8.492415 TTACAGAGGTATATATGGCTTGAACT 57.508 34.615 0.00 0.00 0.00 3.01
4230 4306 6.631971 TTTATTGATCACAGTGAAGCACAA 57.368 33.333 7.50 11.75 36.74 3.33
4231 4307 6.631971 TTATTGATCACAGTGAAGCACAAA 57.368 33.333 7.50 3.68 36.74 2.83
4233 4309 3.277715 TGATCACAGTGAAGCACAAACA 58.722 40.909 7.50 0.00 36.74 2.83
4238 4314 2.095263 ACAGTGAAGCACAAACACACAC 60.095 45.455 0.00 0.00 36.74 3.82
4239 4315 2.095314 CAGTGAAGCACAAACACACACA 60.095 45.455 0.00 0.00 36.74 3.72
4420 4496 2.298446 CAGCACTCTTCTGTTCTCTGGA 59.702 50.000 0.00 0.00 0.00 3.86
4774 4850 2.095461 GGAAGAGGGGAAAATGCAGAC 58.905 52.381 0.00 0.00 0.00 3.51
4810 4886 1.138671 GAGGCTGCGTGAGAGAGAC 59.861 63.158 0.00 0.00 0.00 3.36
4811 4887 2.202544 GGCTGCGTGAGAGAGACG 60.203 66.667 0.00 0.00 39.87 4.18
5158 5253 7.709613 GTCAGTTCAGACTTTACCAGAACTTAA 59.290 37.037 0.00 0.00 44.54 1.85
5218 5313 1.063266 TGTTAGATTTGGGGGATGGGC 60.063 52.381 0.00 0.00 0.00 5.36
5252 5347 3.060895 CGTGTCGCAGATTCCTTTTACTC 59.939 47.826 0.00 0.00 40.67 2.59
5333 5428 5.520288 GCCTTTTCCTTGTCTGTTTTCTTTC 59.480 40.000 0.00 0.00 0.00 2.62
5452 5547 2.243478 TGCCATGGTGGTTATGGTATGT 59.757 45.455 14.67 0.00 45.48 2.29
5515 5610 7.419711 TGACTATAAGTTCAGAACCTAAGGG 57.580 40.000 9.85 0.00 38.88 3.95
5519 5614 8.706521 ACTATAAGTTCAGAACCTAAGGGAATC 58.293 37.037 9.85 0.00 36.25 2.52
5558 5653 4.025313 GTCAACTTCAGTGCAAGTTCTCTC 60.025 45.833 14.12 5.77 43.41 3.20
5944 6039 7.013464 TGTTGGTGTATTAGGTTTTGTAACAGG 59.987 37.037 0.00 0.00 35.92 4.00
6407 6503 8.528643 TGCCTTGCTAACGAGTATGTATAATAT 58.471 33.333 0.00 0.00 0.00 1.28
6458 6554 5.334337 GCAATTGTTTTCTCAAAATGGCCTC 60.334 40.000 3.32 0.00 32.22 4.70
6547 6644 9.892444 TTCCCTTTAGATATCCTGTCTTACATA 57.108 33.333 0.00 0.00 0.00 2.29
6603 6700 6.424509 TGTGGTAAACGTAAGAATTGTCGATT 59.575 34.615 0.00 0.00 43.62 3.34
6658 6804 5.106317 GGTGAAAGAAAGAATTGGCGACATA 60.106 40.000 0.00 0.00 42.32 2.29
6672 6818 1.004610 CGACATATTTGCAGTGCGAGG 60.005 52.381 11.20 2.52 0.00 4.63
6782 6928 2.487372 GTCTTTTCCTCGTCGGTCTAGT 59.513 50.000 0.00 0.00 0.00 2.57
6800 6946 1.739466 AGTAAGATGTGTTGCATGGCG 59.261 47.619 0.00 0.00 38.06 5.69
6813 6959 1.948611 GCATGGCGAGTTGGGTTTCTA 60.949 52.381 0.00 0.00 0.00 2.10
6847 6993 0.617249 AGCAGACCTGGAAGAGAGGG 60.617 60.000 0.00 0.00 34.07 4.30
6855 7437 0.321671 TGGAAGAGAGGGTCGCTTTG 59.678 55.000 0.00 0.00 36.65 2.77
6859 7441 1.561643 AGAGAGGGTCGCTTTGATCA 58.438 50.000 0.00 0.00 0.00 2.92
6895 7477 4.931601 CGTTCTCTTTTCATCACCATCTGA 59.068 41.667 0.00 0.00 0.00 3.27
6914 7496 7.255173 CCATCTGATCATCATTCCTTCAAAGAC 60.255 40.741 0.00 0.00 0.00 3.01
6949 7531 0.951558 TGCTCCTCGGTTTTTCTTGC 59.048 50.000 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.047847 TCTTGGAATGCGCTATGTTACTAC 58.952 41.667 9.73 0.00 0.00 2.73
1 2 5.047847 GTCTTGGAATGCGCTATGTTACTA 58.952 41.667 9.73 0.00 0.00 1.82
2 3 3.871594 GTCTTGGAATGCGCTATGTTACT 59.128 43.478 9.73 0.00 0.00 2.24
3 4 3.621268 TGTCTTGGAATGCGCTATGTTAC 59.379 43.478 9.73 0.00 0.00 2.50
4 5 3.867857 TGTCTTGGAATGCGCTATGTTA 58.132 40.909 9.73 0.00 0.00 2.41
5 6 2.710377 TGTCTTGGAATGCGCTATGTT 58.290 42.857 9.73 0.00 0.00 2.71
6 7 2.401583 TGTCTTGGAATGCGCTATGT 57.598 45.000 9.73 0.00 0.00 2.29
7 8 2.679837 ACTTGTCTTGGAATGCGCTATG 59.320 45.455 9.73 0.00 0.00 2.23
8 9 2.991250 ACTTGTCTTGGAATGCGCTAT 58.009 42.857 9.73 0.00 0.00 2.97
9 10 2.472695 ACTTGTCTTGGAATGCGCTA 57.527 45.000 9.73 0.00 0.00 4.26
10 11 1.609208 AACTTGTCTTGGAATGCGCT 58.391 45.000 9.73 0.00 0.00 5.92
11 12 2.053627 CAAACTTGTCTTGGAATGCGC 58.946 47.619 0.00 0.00 0.00 6.09
12 13 2.053627 GCAAACTTGTCTTGGAATGCG 58.946 47.619 0.00 0.00 0.00 4.73
13 14 3.375782 AGCAAACTTGTCTTGGAATGC 57.624 42.857 0.00 0.00 0.00 3.56
14 15 6.364165 CACATAAGCAAACTTGTCTTGGAATG 59.636 38.462 8.46 7.35 36.57 2.67
15 16 6.449698 CACATAAGCAAACTTGTCTTGGAAT 58.550 36.000 8.46 0.00 36.57 3.01
16 17 5.221224 CCACATAAGCAAACTTGTCTTGGAA 60.221 40.000 8.46 0.00 36.57 3.53
17 18 4.278170 CCACATAAGCAAACTTGTCTTGGA 59.722 41.667 8.46 0.00 36.57 3.53
18 19 4.549458 CCACATAAGCAAACTTGTCTTGG 58.451 43.478 8.46 0.00 36.57 3.61
19 20 3.983344 GCCACATAAGCAAACTTGTCTTG 59.017 43.478 8.46 0.00 36.57 3.02
20 21 3.636300 TGCCACATAAGCAAACTTGTCTT 59.364 39.130 0.00 5.07 37.28 3.01
21 22 3.221771 TGCCACATAAGCAAACTTGTCT 58.778 40.909 0.00 0.00 37.28 3.41
22 23 3.641437 TGCCACATAAGCAAACTTGTC 57.359 42.857 0.00 0.00 37.28 3.18
23 24 5.920193 ATATGCCACATAAGCAAACTTGT 57.080 34.783 0.00 0.00 44.83 3.16
24 25 8.876275 AAATATATGCCACATAAGCAAACTTG 57.124 30.769 0.00 0.00 44.83 3.16
30 31 8.959548 CCTCATTAAATATATGCCACATAAGCA 58.040 33.333 0.00 0.00 45.94 3.91
31 32 9.177608 TCCTCATTAAATATATGCCACATAAGC 57.822 33.333 0.00 0.00 0.00 3.09
35 36 8.829746 TCTCTCCTCATTAAATATATGCCACAT 58.170 33.333 0.00 0.00 0.00 3.21
36 37 8.206126 TCTCTCCTCATTAAATATATGCCACA 57.794 34.615 0.00 0.00 0.00 4.17
37 38 7.768120 CCTCTCTCCTCATTAAATATATGCCAC 59.232 40.741 0.00 0.00 0.00 5.01
38 39 7.459125 ACCTCTCTCCTCATTAAATATATGCCA 59.541 37.037 0.00 0.00 0.00 4.92
39 40 7.768120 CACCTCTCTCCTCATTAAATATATGCC 59.232 40.741 0.00 0.00 0.00 4.40
40 41 8.317679 ACACCTCTCTCCTCATTAAATATATGC 58.682 37.037 0.00 0.00 0.00 3.14
44 45 7.995488 CCAAACACCTCTCTCCTCATTAAATAT 59.005 37.037 0.00 0.00 0.00 1.28
45 46 7.182026 TCCAAACACCTCTCTCCTCATTAAATA 59.818 37.037 0.00 0.00 0.00 1.40
46 47 6.012508 TCCAAACACCTCTCTCCTCATTAAAT 60.013 38.462 0.00 0.00 0.00 1.40
47 48 5.309543 TCCAAACACCTCTCTCCTCATTAAA 59.690 40.000 0.00 0.00 0.00 1.52
48 49 4.844085 TCCAAACACCTCTCTCCTCATTAA 59.156 41.667 0.00 0.00 0.00 1.40
49 50 4.425772 TCCAAACACCTCTCTCCTCATTA 58.574 43.478 0.00 0.00 0.00 1.90
50 51 3.251484 TCCAAACACCTCTCTCCTCATT 58.749 45.455 0.00 0.00 0.00 2.57
51 52 2.836981 CTCCAAACACCTCTCTCCTCAT 59.163 50.000 0.00 0.00 0.00 2.90
52 53 2.251818 CTCCAAACACCTCTCTCCTCA 58.748 52.381 0.00 0.00 0.00 3.86
53 54 2.252714 ACTCCAAACACCTCTCTCCTC 58.747 52.381 0.00 0.00 0.00 3.71
54 55 2.407340 ACTCCAAACACCTCTCTCCT 57.593 50.000 0.00 0.00 0.00 3.69
55 56 3.323979 TGTTACTCCAAACACCTCTCTCC 59.676 47.826 0.00 0.00 34.50 3.71
56 57 4.602340 TGTTACTCCAAACACCTCTCTC 57.398 45.455 0.00 0.00 34.50 3.20
57 58 6.681729 TTATGTTACTCCAAACACCTCTCT 57.318 37.500 0.00 0.00 41.89 3.10
58 59 9.046296 CATATTATGTTACTCCAAACACCTCTC 57.954 37.037 0.00 0.00 41.89 3.20
59 60 8.548877 ACATATTATGTTACTCCAAACACCTCT 58.451 33.333 3.40 0.00 41.63 3.69
60 61 8.732746 ACATATTATGTTACTCCAAACACCTC 57.267 34.615 3.40 0.00 41.63 3.85
84 85 4.451774 TGGGTTGCGTTATGTTACAGTAAC 59.548 41.667 15.58 15.58 39.11 2.50
85 86 4.639334 TGGGTTGCGTTATGTTACAGTAA 58.361 39.130 0.00 0.00 0.00 2.24
86 87 4.268797 TGGGTTGCGTTATGTTACAGTA 57.731 40.909 0.00 0.00 0.00 2.74
87 88 3.128852 TGGGTTGCGTTATGTTACAGT 57.871 42.857 0.00 0.00 0.00 3.55
88 89 4.491234 TTTGGGTTGCGTTATGTTACAG 57.509 40.909 0.00 0.00 0.00 2.74
89 90 4.097437 TGTTTTGGGTTGCGTTATGTTACA 59.903 37.500 0.00 0.00 0.00 2.41
90 91 4.608951 TGTTTTGGGTTGCGTTATGTTAC 58.391 39.130 0.00 0.00 0.00 2.50
91 92 4.913335 TGTTTTGGGTTGCGTTATGTTA 57.087 36.364 0.00 0.00 0.00 2.41
92 93 3.802948 TGTTTTGGGTTGCGTTATGTT 57.197 38.095 0.00 0.00 0.00 2.71
93 94 3.802948 TTGTTTTGGGTTGCGTTATGT 57.197 38.095 0.00 0.00 0.00 2.29
94 95 5.470845 TTTTTGTTTTGGGTTGCGTTATG 57.529 34.783 0.00 0.00 0.00 1.90
95 96 5.817816 TCATTTTTGTTTTGGGTTGCGTTAT 59.182 32.000 0.00 0.00 0.00 1.89
96 97 5.175859 TCATTTTTGTTTTGGGTTGCGTTA 58.824 33.333 0.00 0.00 0.00 3.18
97 98 4.003648 TCATTTTTGTTTTGGGTTGCGTT 58.996 34.783 0.00 0.00 0.00 4.84
98 99 3.600388 TCATTTTTGTTTTGGGTTGCGT 58.400 36.364 0.00 0.00 0.00 5.24
99 100 3.620821 ACTCATTTTTGTTTTGGGTTGCG 59.379 39.130 0.00 0.00 0.00 4.85
100 101 4.875536 AGACTCATTTTTGTTTTGGGTTGC 59.124 37.500 0.00 0.00 0.00 4.17
101 102 9.757227 TTATAGACTCATTTTTGTTTTGGGTTG 57.243 29.630 0.00 0.00 0.00 3.77
134 135 9.445878 CAAGTAGTATCATAGATGATGGCATTT 57.554 33.333 14.07 0.00 46.34 2.32
135 136 8.600668 ACAAGTAGTATCATAGATGATGGCATT 58.399 33.333 14.07 0.00 46.34 3.56
136 137 8.143673 ACAAGTAGTATCATAGATGATGGCAT 57.856 34.615 14.07 0.00 46.34 4.40
137 138 7.544804 ACAAGTAGTATCATAGATGATGGCA 57.455 36.000 14.07 0.00 46.34 4.92
167 168 9.502091 TTTGTTACTATCTTCATAGTGCAAAGT 57.498 29.630 15.24 0.00 44.33 2.66
168 169 9.979270 CTTTGTTACTATCTTCATAGTGCAAAG 57.021 33.333 22.36 22.36 46.53 2.77
169 170 9.719355 TCTTTGTTACTATCTTCATAGTGCAAA 57.281 29.630 16.75 16.75 44.33 3.68
170 171 9.151471 GTCTTTGTTACTATCTTCATAGTGCAA 57.849 33.333 5.12 7.17 44.33 4.08
171 172 8.531982 AGTCTTTGTTACTATCTTCATAGTGCA 58.468 33.333 5.12 0.00 44.33 4.57
172 173 8.934507 AGTCTTTGTTACTATCTTCATAGTGC 57.065 34.615 5.12 0.14 44.33 4.40
178 179 9.074576 TGACACTAGTCTTTGTTACTATCTTCA 57.925 33.333 0.00 0.00 45.20 3.02
202 203 7.898014 ACTTAGACCAGTGTCATACATATGA 57.102 36.000 10.38 0.00 44.33 2.15
203 204 9.464714 GTAACTTAGACCAGTGTCATACATATG 57.535 37.037 0.00 0.00 44.33 1.78
204 205 9.422681 AGTAACTTAGACCAGTGTCATACATAT 57.577 33.333 0.00 0.00 44.33 1.78
205 206 8.818622 AGTAACTTAGACCAGTGTCATACATA 57.181 34.615 0.00 0.00 44.33 2.29
206 207 7.719871 AGTAACTTAGACCAGTGTCATACAT 57.280 36.000 0.00 0.00 44.33 2.29
207 208 7.309621 GGAAGTAACTTAGACCAGTGTCATACA 60.310 40.741 0.00 0.00 44.33 2.29
208 209 7.034397 GGAAGTAACTTAGACCAGTGTCATAC 58.966 42.308 0.00 0.00 44.33 2.39
209 210 6.154021 GGGAAGTAACTTAGACCAGTGTCATA 59.846 42.308 0.00 0.00 44.33 2.15
210 211 5.046520 GGGAAGTAACTTAGACCAGTGTCAT 60.047 44.000 0.00 0.00 44.33 3.06
211 212 4.282703 GGGAAGTAACTTAGACCAGTGTCA 59.717 45.833 0.00 0.00 44.33 3.58
212 213 4.282703 TGGGAAGTAACTTAGACCAGTGTC 59.717 45.833 0.00 0.00 42.09 3.67
213 214 4.040095 GTGGGAAGTAACTTAGACCAGTGT 59.960 45.833 0.00 0.00 0.00 3.55
214 215 4.283722 AGTGGGAAGTAACTTAGACCAGTG 59.716 45.833 0.00 0.00 30.11 3.66
215 216 4.490706 AGTGGGAAGTAACTTAGACCAGT 58.509 43.478 0.00 0.00 0.00 4.00
216 217 6.793505 ATAGTGGGAAGTAACTTAGACCAG 57.206 41.667 0.00 0.00 0.00 4.00
217 218 7.897565 AGTTATAGTGGGAAGTAACTTAGACCA 59.102 37.037 0.00 0.00 34.65 4.02
218 219 8.303780 AGTTATAGTGGGAAGTAACTTAGACC 57.696 38.462 0.00 0.00 34.65 3.85
223 224 9.544579 AAGTCTAGTTATAGTGGGAAGTAACTT 57.455 33.333 2.45 0.00 38.14 2.66
226 227 9.129532 GCTAAGTCTAGTTATAGTGGGAAGTAA 57.870 37.037 0.00 0.00 0.00 2.24
227 228 8.501070 AGCTAAGTCTAGTTATAGTGGGAAGTA 58.499 37.037 0.00 0.00 0.00 2.24
228 229 7.285858 CAGCTAAGTCTAGTTATAGTGGGAAGT 59.714 40.741 0.00 0.00 0.00 3.01
229 230 7.502895 TCAGCTAAGTCTAGTTATAGTGGGAAG 59.497 40.741 0.00 0.00 0.00 3.46
230 231 7.351952 TCAGCTAAGTCTAGTTATAGTGGGAA 58.648 38.462 0.00 0.00 0.00 3.97
231 232 6.907961 TCAGCTAAGTCTAGTTATAGTGGGA 58.092 40.000 0.00 0.00 0.00 4.37
232 233 7.285858 AGTTCAGCTAAGTCTAGTTATAGTGGG 59.714 40.741 0.00 0.00 0.00 4.61
233 234 8.228035 AGTTCAGCTAAGTCTAGTTATAGTGG 57.772 38.462 0.00 0.00 0.00 4.00
234 235 9.509855 CAAGTTCAGCTAAGTCTAGTTATAGTG 57.490 37.037 0.00 0.00 0.00 2.74
235 236 9.245481 ACAAGTTCAGCTAAGTCTAGTTATAGT 57.755 33.333 0.00 0.00 0.00 2.12
239 240 8.027771 GCTAACAAGTTCAGCTAAGTCTAGTTA 58.972 37.037 0.00 0.00 32.46 2.24
240 241 6.869388 GCTAACAAGTTCAGCTAAGTCTAGTT 59.131 38.462 0.00 0.00 32.46 2.24
241 242 6.391537 GCTAACAAGTTCAGCTAAGTCTAGT 58.608 40.000 0.00 0.00 32.46 2.57
242 243 5.513495 CGCTAACAAGTTCAGCTAAGTCTAG 59.487 44.000 0.00 0.00 33.03 2.43
243 244 5.182570 TCGCTAACAAGTTCAGCTAAGTCTA 59.817 40.000 0.00 0.00 33.03 2.59
244 245 4.022242 TCGCTAACAAGTTCAGCTAAGTCT 60.022 41.667 0.00 0.00 33.03 3.24
245 246 4.235360 TCGCTAACAAGTTCAGCTAAGTC 58.765 43.478 0.00 0.00 33.03 3.01
246 247 4.252971 TCGCTAACAAGTTCAGCTAAGT 57.747 40.909 0.00 0.00 33.03 2.24
247 248 4.627467 ACATCGCTAACAAGTTCAGCTAAG 59.373 41.667 0.00 3.30 33.03 2.18
248 249 4.566004 ACATCGCTAACAAGTTCAGCTAA 58.434 39.130 0.00 0.00 33.03 3.09
249 250 4.188247 ACATCGCTAACAAGTTCAGCTA 57.812 40.909 0.00 3.60 33.03 3.32
250 251 3.045601 ACATCGCTAACAAGTTCAGCT 57.954 42.857 10.44 0.00 33.03 4.24
251 252 3.927142 AGTACATCGCTAACAAGTTCAGC 59.073 43.478 0.00 0.00 0.00 4.26
252 253 4.563184 GGAGTACATCGCTAACAAGTTCAG 59.437 45.833 0.00 0.00 0.00 3.02
253 254 4.491676 GGAGTACATCGCTAACAAGTTCA 58.508 43.478 0.00 0.00 0.00 3.18
254 255 3.864003 GGGAGTACATCGCTAACAAGTTC 59.136 47.826 0.00 0.00 37.86 3.01
255 256 3.858247 GGGAGTACATCGCTAACAAGTT 58.142 45.455 0.00 0.00 37.86 2.66
256 257 3.521947 GGGAGTACATCGCTAACAAGT 57.478 47.619 0.00 0.00 37.86 3.16
264 265 3.130693 AGTTTACAGAGGGAGTACATCGC 59.869 47.826 0.00 0.00 41.11 4.58
265 266 4.985538 AGTTTACAGAGGGAGTACATCG 57.014 45.455 0.00 0.00 0.00 3.84
271 272 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
272 273 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
273 274 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
274 275 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
275 276 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
301 302 9.458727 CCCTCCGTAAACTAATATAGTGATCTA 57.541 37.037 0.00 0.00 39.39 1.98
302 303 8.168725 TCCCTCCGTAAACTAATATAGTGATCT 58.831 37.037 0.00 0.00 39.39 2.75
303 304 8.345724 TCCCTCCGTAAACTAATATAGTGATC 57.654 38.462 0.00 0.00 39.39 2.92
304 305 7.949006 ACTCCCTCCGTAAACTAATATAGTGAT 59.051 37.037 0.00 0.00 39.39 3.06
305 306 7.293073 ACTCCCTCCGTAAACTAATATAGTGA 58.707 38.462 0.00 0.00 39.39 3.41
306 307 7.521871 ACTCCCTCCGTAAACTAATATAGTG 57.478 40.000 0.00 0.00 39.39 2.74
307 308 9.819754 ATTACTCCCTCCGTAAACTAATATAGT 57.180 33.333 0.00 0.00 41.73 2.12
319 320 9.991906 CTCAAAATAATAATTACTCCCTCCGTA 57.008 33.333 0.00 0.00 0.00 4.02
320 321 8.491958 ACTCAAAATAATAATTACTCCCTCCGT 58.508 33.333 0.00 0.00 0.00 4.69
321 322 8.904099 ACTCAAAATAATAATTACTCCCTCCG 57.096 34.615 0.00 0.00 0.00 4.63
376 377 0.616964 ACCGGAAAGGAGGGAGTACC 60.617 60.000 9.46 0.00 45.00 3.34
377 378 1.273759 AACCGGAAAGGAGGGAGTAC 58.726 55.000 9.46 0.00 45.00 2.73
378 379 2.034436 AAACCGGAAAGGAGGGAGTA 57.966 50.000 9.46 0.00 45.00 2.59
379 380 2.034436 TAAACCGGAAAGGAGGGAGT 57.966 50.000 9.46 0.00 45.00 3.85
380 381 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
381 382 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
382 383 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
383 384 2.486727 GCCCTATAAACCGGAAAGGAGG 60.487 54.545 9.46 9.03 45.00 4.30
384 385 2.438392 AGCCCTATAAACCGGAAAGGAG 59.562 50.000 9.46 0.00 45.00 3.69
385 386 2.436911 GAGCCCTATAAACCGGAAAGGA 59.563 50.000 9.46 0.00 45.00 3.36
387 388 3.553828 TGAGCCCTATAAACCGGAAAG 57.446 47.619 9.46 0.00 0.00 2.62
388 389 4.513406 ATTGAGCCCTATAAACCGGAAA 57.487 40.909 9.46 0.00 0.00 3.13
389 390 4.080243 TGAATTGAGCCCTATAAACCGGAA 60.080 41.667 9.46 0.00 0.00 4.30
390 391 3.456644 TGAATTGAGCCCTATAAACCGGA 59.543 43.478 9.46 0.00 0.00 5.14
391 392 3.815809 TGAATTGAGCCCTATAAACCGG 58.184 45.455 0.00 0.00 0.00 5.28
392 393 5.828299 TTTGAATTGAGCCCTATAAACCG 57.172 39.130 0.00 0.00 0.00 4.44
393 394 8.478066 AGATTTTTGAATTGAGCCCTATAAACC 58.522 33.333 0.00 0.00 0.00 3.27
394 395 9.521503 GAGATTTTTGAATTGAGCCCTATAAAC 57.478 33.333 0.00 0.00 0.00 2.01
395 396 9.253832 TGAGATTTTTGAATTGAGCCCTATAAA 57.746 29.630 0.00 0.00 0.00 1.40
396 397 8.686334 GTGAGATTTTTGAATTGAGCCCTATAA 58.314 33.333 0.00 0.00 0.00 0.98
397 398 7.285401 GGTGAGATTTTTGAATTGAGCCCTATA 59.715 37.037 0.00 0.00 0.00 1.31
398 399 6.097412 GGTGAGATTTTTGAATTGAGCCCTAT 59.903 38.462 0.00 0.00 0.00 2.57
399 400 5.418840 GGTGAGATTTTTGAATTGAGCCCTA 59.581 40.000 0.00 0.00 0.00 3.53
400 401 4.221482 GGTGAGATTTTTGAATTGAGCCCT 59.779 41.667 0.00 0.00 0.00 5.19
401 402 4.021192 TGGTGAGATTTTTGAATTGAGCCC 60.021 41.667 0.00 0.00 0.00 5.19
402 403 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
403 404 5.406477 GGTTGGTGAGATTTTTGAATTGAGC 59.594 40.000 0.00 0.00 0.00 4.26
404 405 6.514947 TGGTTGGTGAGATTTTTGAATTGAG 58.485 36.000 0.00 0.00 0.00 3.02
405 406 6.477053 TGGTTGGTGAGATTTTTGAATTGA 57.523 33.333 0.00 0.00 0.00 2.57
406 407 6.985645 TCTTGGTTGGTGAGATTTTTGAATTG 59.014 34.615 0.00 0.00 0.00 2.32
407 408 7.123355 TCTTGGTTGGTGAGATTTTTGAATT 57.877 32.000 0.00 0.00 0.00 2.17
408 409 6.729690 TCTTGGTTGGTGAGATTTTTGAAT 57.270 33.333 0.00 0.00 0.00 2.57
409 410 6.729690 ATCTTGGTTGGTGAGATTTTTGAA 57.270 33.333 0.00 0.00 0.00 2.69
410 411 7.230747 TCTATCTTGGTTGGTGAGATTTTTGA 58.769 34.615 0.00 0.00 32.68 2.69
411 412 7.452880 TCTATCTTGGTTGGTGAGATTTTTG 57.547 36.000 0.00 0.00 32.68 2.44
412 413 7.123247 CCATCTATCTTGGTTGGTGAGATTTTT 59.877 37.037 0.00 0.00 32.68 1.94
413 414 6.604795 CCATCTATCTTGGTTGGTGAGATTTT 59.395 38.462 0.00 0.00 32.68 1.82
414 415 6.125029 CCATCTATCTTGGTTGGTGAGATTT 58.875 40.000 0.00 0.00 32.68 2.17
415 416 5.192522 ACCATCTATCTTGGTTGGTGAGATT 59.807 40.000 0.00 0.00 45.19 2.40
416 417 4.723789 ACCATCTATCTTGGTTGGTGAGAT 59.276 41.667 0.00 0.00 45.19 2.75
417 418 4.104086 ACCATCTATCTTGGTTGGTGAGA 58.896 43.478 0.00 0.00 45.19 3.27
418 419 4.494091 ACCATCTATCTTGGTTGGTGAG 57.506 45.455 0.00 0.00 45.19 3.51
421 422 3.846588 ACTCACCATCTATCTTGGTTGGT 59.153 43.478 0.00 0.00 45.19 3.67
422 423 4.194640 CACTCACCATCTATCTTGGTTGG 58.805 47.826 0.00 0.00 45.19 3.77
423 424 4.194640 CCACTCACCATCTATCTTGGTTG 58.805 47.826 0.00 0.00 45.19 3.77
424 425 3.846588 ACCACTCACCATCTATCTTGGTT 59.153 43.478 0.00 0.00 45.19 3.67
426 427 3.432749 CCACCACTCACCATCTATCTTGG 60.433 52.174 0.00 0.00 40.26 3.61
427 428 3.452264 TCCACCACTCACCATCTATCTTG 59.548 47.826 0.00 0.00 0.00 3.02
428 429 3.724478 TCCACCACTCACCATCTATCTT 58.276 45.455 0.00 0.00 0.00 2.40
429 430 3.404869 TCCACCACTCACCATCTATCT 57.595 47.619 0.00 0.00 0.00 1.98
430 431 4.696479 ATTCCACCACTCACCATCTATC 57.304 45.455 0.00 0.00 0.00 2.08
431 432 5.219739 AGTATTCCACCACTCACCATCTAT 58.780 41.667 0.00 0.00 0.00 1.98
432 433 4.620723 AGTATTCCACCACTCACCATCTA 58.379 43.478 0.00 0.00 0.00 1.98
433 434 3.454858 AGTATTCCACCACTCACCATCT 58.545 45.455 0.00 0.00 0.00 2.90
434 435 3.914426 AGTATTCCACCACTCACCATC 57.086 47.619 0.00 0.00 0.00 3.51
435 436 4.657814 AAAGTATTCCACCACTCACCAT 57.342 40.909 0.00 0.00 0.00 3.55
436 437 4.447138 AAAAGTATTCCACCACTCACCA 57.553 40.909 0.00 0.00 0.00 4.17
437 438 4.583073 ACAAAAAGTATTCCACCACTCACC 59.417 41.667 0.00 0.00 0.00 4.02
438 439 5.507315 CCACAAAAAGTATTCCACCACTCAC 60.507 44.000 0.00 0.00 0.00 3.51
439 440 4.582656 CCACAAAAAGTATTCCACCACTCA 59.417 41.667 0.00 0.00 0.00 3.41
440 441 4.583073 ACCACAAAAAGTATTCCACCACTC 59.417 41.667 0.00 0.00 0.00 3.51
441 442 4.542697 ACCACAAAAAGTATTCCACCACT 58.457 39.130 0.00 0.00 0.00 4.00
442 443 4.929819 ACCACAAAAAGTATTCCACCAC 57.070 40.909 0.00 0.00 0.00 4.16
443 444 5.665459 CAAACCACAAAAAGTATTCCACCA 58.335 37.500 0.00 0.00 0.00 4.17
444 445 4.509970 GCAAACCACAAAAAGTATTCCACC 59.490 41.667 0.00 0.00 0.00 4.61
445 446 5.112686 TGCAAACCACAAAAAGTATTCCAC 58.887 37.500 0.00 0.00 0.00 4.02
446 447 5.344743 TGCAAACCACAAAAAGTATTCCA 57.655 34.783 0.00 0.00 0.00 3.53
447 448 6.670077 TTTGCAAACCACAAAAAGTATTCC 57.330 33.333 8.05 0.00 34.22 3.01
448 449 6.686679 GCTTTTGCAAACCACAAAAAGTATTC 59.313 34.615 12.39 0.00 44.07 1.75
449 450 6.550843 GCTTTTGCAAACCACAAAAAGTATT 58.449 32.000 12.39 0.00 44.07 1.89
450 451 6.117911 GCTTTTGCAAACCACAAAAAGTAT 57.882 33.333 12.39 0.00 44.07 2.12
451 452 5.538067 GCTTTTGCAAACCACAAAAAGTA 57.462 34.783 12.39 0.00 44.07 2.24
452 453 4.418013 GCTTTTGCAAACCACAAAAAGT 57.582 36.364 12.39 0.00 44.07 2.66
472 473 7.387673 AGGAAAACAAAAGCATTAATTAGGTGC 59.612 33.333 13.92 13.92 39.10 5.01
473 474 8.831715 AGGAAAACAAAAGCATTAATTAGGTG 57.168 30.769 0.00 0.00 0.00 4.00
474 475 8.646900 TGAGGAAAACAAAAGCATTAATTAGGT 58.353 29.630 0.00 0.00 0.00 3.08
475 476 9.487790 TTGAGGAAAACAAAAGCATTAATTAGG 57.512 29.630 0.00 0.00 0.00 2.69
545 546 9.941325 AGAAAATTGACCAATGCATGTATTTTA 57.059 25.926 6.26 0.00 0.00 1.52
546 547 8.851541 AGAAAATTGACCAATGCATGTATTTT 57.148 26.923 6.26 5.30 0.00 1.82
547 548 8.316214 AGAGAAAATTGACCAATGCATGTATTT 58.684 29.630 6.26 0.00 0.00 1.40
548 549 7.844009 AGAGAAAATTGACCAATGCATGTATT 58.156 30.769 0.00 2.84 0.00 1.89
549 550 7.414222 AGAGAAAATTGACCAATGCATGTAT 57.586 32.000 0.00 0.00 0.00 2.29
550 551 6.839124 AGAGAAAATTGACCAATGCATGTA 57.161 33.333 0.00 0.00 0.00 2.29
551 552 5.733620 AGAGAAAATTGACCAATGCATGT 57.266 34.783 0.00 0.00 0.00 3.21
552 553 8.712285 ATTAAGAGAAAATTGACCAATGCATG 57.288 30.769 0.00 0.00 0.00 4.06
553 554 9.807649 GTATTAAGAGAAAATTGACCAATGCAT 57.192 29.630 0.00 0.00 0.00 3.96
554 555 9.023962 AGTATTAAGAGAAAATTGACCAATGCA 57.976 29.630 0.00 0.00 0.00 3.96
555 556 9.860898 AAGTATTAAGAGAAAATTGACCAATGC 57.139 29.630 0.00 0.00 0.00 3.56
575 576 9.602568 TGCATTAAATCATTGCATTCAAGTATT 57.397 25.926 0.00 0.00 41.18 1.89
576 577 9.037737 GTGCATTAAATCATTGCATTCAAGTAT 57.962 29.630 4.14 0.00 46.90 2.12
577 578 7.492020 GGTGCATTAAATCATTGCATTCAAGTA 59.508 33.333 4.14 0.00 46.90 2.24
578 579 6.314400 GGTGCATTAAATCATTGCATTCAAGT 59.686 34.615 4.14 0.00 46.90 3.16
579 580 6.537301 AGGTGCATTAAATCATTGCATTCAAG 59.463 34.615 4.14 0.00 46.90 3.02
580 581 6.408035 AGGTGCATTAAATCATTGCATTCAA 58.592 32.000 4.14 0.00 46.90 2.69
581 582 5.979993 AGGTGCATTAAATCATTGCATTCA 58.020 33.333 4.14 0.00 46.90 2.57
582 583 6.913873 AAGGTGCATTAAATCATTGCATTC 57.086 33.333 4.14 1.43 46.90 2.67
583 584 8.789825 TTTAAGGTGCATTAAATCATTGCATT 57.210 26.923 4.14 0.00 46.90 3.56
584 585 8.789825 TTTTAAGGTGCATTAAATCATTGCAT 57.210 26.923 4.14 0.00 46.90 3.96
585 586 8.789825 ATTTTAAGGTGCATTAAATCATTGCA 57.210 26.923 6.16 0.00 43.63 4.08
594 595 9.553064 ACATGTTCAAATTTTAAGGTGCATTAA 57.447 25.926 0.00 0.00 0.00 1.40
595 596 8.986847 CACATGTTCAAATTTTAAGGTGCATTA 58.013 29.630 0.00 0.00 0.00 1.90
596 597 7.714377 TCACATGTTCAAATTTTAAGGTGCATT 59.286 29.630 0.00 0.00 0.00 3.56
597 598 7.215789 TCACATGTTCAAATTTTAAGGTGCAT 58.784 30.769 0.00 0.00 0.00 3.96
598 599 6.577103 TCACATGTTCAAATTTTAAGGTGCA 58.423 32.000 0.00 0.00 0.00 4.57
599 600 7.384660 TCATCACATGTTCAAATTTTAAGGTGC 59.615 33.333 0.00 0.00 0.00 5.01
600 601 8.815141 TCATCACATGTTCAAATTTTAAGGTG 57.185 30.769 0.00 0.00 0.00 4.00
601 602 9.829507 TTTCATCACATGTTCAAATTTTAAGGT 57.170 25.926 0.00 0.00 0.00 3.50
607 608 9.771915 GTTGTTTTTCATCACATGTTCAAATTT 57.228 25.926 0.00 0.00 0.00 1.82
608 609 8.397148 GGTTGTTTTTCATCACATGTTCAAATT 58.603 29.630 0.00 0.00 0.00 1.82
609 610 7.551974 TGGTTGTTTTTCATCACATGTTCAAAT 59.448 29.630 0.00 0.00 0.00 2.32
613 614 6.900568 TTGGTTGTTTTTCATCACATGTTC 57.099 33.333 0.00 0.00 0.00 3.18
616 617 7.917597 TCAATTTGGTTGTTTTTCATCACATG 58.082 30.769 0.00 0.00 38.95 3.21
622 623 5.683681 AGGCTCAATTTGGTTGTTTTTCAT 58.316 33.333 0.00 0.00 38.95 2.57
624 625 7.728847 ATAAGGCTCAATTTGGTTGTTTTTC 57.271 32.000 0.00 0.00 38.95 2.29
668 669 8.977412 CCCTCTTTTTATAGGGCTTATTTCAAA 58.023 33.333 0.00 0.00 45.91 2.69
708 709 1.065854 CCACCTAAGGAGAGTTGCCTG 60.066 57.143 0.00 0.00 35.50 4.85
749 759 0.939577 GACAAGTGTTCGAGCTCGCA 60.940 55.000 30.97 19.02 39.60 5.10
750 760 0.939577 TGACAAGTGTTCGAGCTCGC 60.940 55.000 30.97 18.37 39.60 5.03
751 761 0.778815 GTGACAAGTGTTCGAGCTCG 59.221 55.000 30.03 30.03 41.45 5.03
752 762 2.055100 GAGTGACAAGTGTTCGAGCTC 58.945 52.381 2.73 2.73 0.00 4.09
753 763 1.683917 AGAGTGACAAGTGTTCGAGCT 59.316 47.619 0.00 0.00 0.00 4.09
754 764 2.055100 GAGAGTGACAAGTGTTCGAGC 58.945 52.381 0.00 0.00 0.00 5.03
886 898 2.928036 TTGATCTGACCAGAGAGGGA 57.072 50.000 5.90 0.00 43.89 4.20
918 930 2.178521 GACGCGAGCGAGAAGGAA 59.821 61.111 24.72 0.00 42.83 3.36
919 931 3.812019 GGACGCGAGCGAGAAGGA 61.812 66.667 24.72 0.00 42.83 3.36
920 932 4.856607 GGGACGCGAGCGAGAAGG 62.857 72.222 24.72 0.00 42.83 3.46
1154 1166 4.741239 TCTGGGGAGGGGGCAGTC 62.741 72.222 0.00 0.00 0.00 3.51
1186 1198 2.892425 GATCAGCGCCAGGAACCG 60.892 66.667 2.29 0.00 0.00 4.44
1212 1224 0.521291 GCTGCAGAAACACGCCAATA 59.479 50.000 20.43 0.00 0.00 1.90
1488 1500 5.844004 ACAGCCAAGATAAACCTAGTATCG 58.156 41.667 0.00 0.00 33.89 2.92
1532 1544 3.558931 AGCGTGTATGATCCCATTCAA 57.441 42.857 0.00 0.00 32.96 2.69
1533 1545 3.205338 CAAGCGTGTATGATCCCATTCA 58.795 45.455 0.00 0.00 34.31 2.57
1757 1784 3.072476 TGGTAGACAGGGAACAAGGAAAG 59.928 47.826 0.00 0.00 0.00 2.62
1814 1848 4.990526 AGGCAGGGGTAAATAATGATCAG 58.009 43.478 0.09 0.00 0.00 2.90
1894 1936 5.144359 GTTTACAGCCTTTGTCATAACACG 58.856 41.667 0.00 0.00 41.29 4.49
1896 1938 5.381757 AGGTTTACAGCCTTTGTCATAACA 58.618 37.500 0.00 0.00 41.29 2.41
1921 1963 7.994425 TCTAATGTAGCAATTTCCAGTGAAA 57.006 32.000 0.00 0.00 44.22 2.69
1974 2016 6.677781 TGAGCCAGTACTTAATGCATTAAC 57.322 37.500 24.63 17.23 0.00 2.01
2015 2057 2.030893 ACACACACACATATGCAACTGC 60.031 45.455 1.58 0.00 42.50 4.40
2017 2059 6.823182 ACATATACACACACACATATGCAACT 59.177 34.615 1.58 0.00 35.63 3.16
2270 2314 9.353999 GGTAATATTTTCTCCAACAATGTGAAC 57.646 33.333 0.00 0.00 0.00 3.18
2286 2330 3.284617 GCGGGACTGTGGGTAATATTTT 58.715 45.455 0.00 0.00 0.00 1.82
2287 2331 2.422377 GGCGGGACTGTGGGTAATATTT 60.422 50.000 0.00 0.00 0.00 1.40
2323 2367 1.664151 GGGGAGTGAAAGCGAAATACG 59.336 52.381 0.00 0.00 45.66 3.06
2386 2431 0.754957 AGAGGGAGAGATCTGTGGCG 60.755 60.000 0.00 0.00 0.00 5.69
2491 2550 1.002662 ATGCCTCAGAGCTCCAGGA 59.997 57.895 26.78 14.82 0.00 3.86
2492 2551 1.049855 AGATGCCTCAGAGCTCCAGG 61.050 60.000 20.72 20.72 0.00 4.45
2493 2552 0.831966 AAGATGCCTCAGAGCTCCAG 59.168 55.000 10.93 6.71 0.00 3.86
2494 2553 1.065636 CAAAGATGCCTCAGAGCTCCA 60.066 52.381 10.93 0.37 0.00 3.86
2495 2554 1.209019 TCAAAGATGCCTCAGAGCTCC 59.791 52.381 10.93 0.00 0.00 4.70
2496 2555 2.278854 GTCAAAGATGCCTCAGAGCTC 58.721 52.381 5.27 5.27 0.00 4.09
2497 2556 1.405256 CGTCAAAGATGCCTCAGAGCT 60.405 52.381 0.00 0.00 0.00 4.09
2498 2557 1.005340 CGTCAAAGATGCCTCAGAGC 58.995 55.000 0.00 0.00 0.00 4.09
2499 2558 2.662006 TCGTCAAAGATGCCTCAGAG 57.338 50.000 0.00 0.00 0.00 3.35
2500 2559 2.159043 GGATCGTCAAAGATGCCTCAGA 60.159 50.000 0.00 0.00 33.59 3.27
2501 2560 2.158986 AGGATCGTCAAAGATGCCTCAG 60.159 50.000 0.00 0.00 39.39 3.35
2502 2561 1.833630 AGGATCGTCAAAGATGCCTCA 59.166 47.619 0.00 0.00 39.39 3.86
2711 2773 4.314440 TTCGCCAAGGTGCTCGCT 62.314 61.111 0.00 0.00 0.00 4.93
2715 2777 2.357517 CTCGTTCGCCAAGGTGCT 60.358 61.111 0.00 0.00 0.00 4.40
2739 2801 1.004277 CAGCCTCGTGTCGACTGTTC 61.004 60.000 17.92 4.06 29.47 3.18
2844 2906 2.415010 CTCACAGAGCCGGATCCG 59.585 66.667 27.65 27.65 39.44 4.18
2980 3055 3.273654 TCCGACCTGTCCTCCCCT 61.274 66.667 0.00 0.00 0.00 4.79
3029 3105 8.820831 TGAATTCTCTATCTTCCAGAACTTTCT 58.179 33.333 7.05 0.00 38.25 2.52
3067 3143 2.544486 CCAGAGCTTTGAGCCAAACAAC 60.544 50.000 5.68 0.00 43.77 3.32
3135 3211 1.678598 CCGGTTCGTGGTATGGGCTA 61.679 60.000 0.00 0.00 0.00 3.93
3161 3237 2.876091 CAGCAAACCAATCATGCTCAG 58.124 47.619 0.00 0.00 46.98 3.35
3162 3238 1.067425 GCAGCAAACCAATCATGCTCA 60.067 47.619 0.00 0.00 46.98 4.26
3163 3239 1.636988 GCAGCAAACCAATCATGCTC 58.363 50.000 0.00 0.00 46.98 4.26
3165 3241 0.037139 TGGCAGCAAACCAATCATGC 60.037 50.000 0.00 0.00 40.34 4.06
3166 3242 2.459060 TTGGCAGCAAACCAATCATG 57.541 45.000 0.00 0.00 42.23 3.07
3172 3248 3.331478 CCAAATATTGGCAGCAAACCA 57.669 42.857 0.00 0.00 45.17 3.67
3223 3299 3.658757 TTTGGCAAGTCTTGGTATTGC 57.341 42.857 14.40 0.00 46.67 3.56
3224 3300 6.757947 CCAATATTTGGCAAGTCTTGGTATTG 59.242 38.462 23.32 15.18 45.17 1.90
3225 3301 6.877236 CCAATATTTGGCAAGTCTTGGTATT 58.123 36.000 23.32 6.16 45.17 1.89
3226 3302 6.469782 CCAATATTTGGCAAGTCTTGGTAT 57.530 37.500 23.32 6.82 45.17 2.73
3227 3303 5.913137 CCAATATTTGGCAAGTCTTGGTA 57.087 39.130 23.32 0.00 45.17 3.25
3228 3304 4.806640 CCAATATTTGGCAAGTCTTGGT 57.193 40.909 23.32 1.82 45.17 3.67
3243 3319 9.289782 GCCTATCTCACATAAAGTTTCCAATAT 57.710 33.333 0.00 0.00 0.00 1.28
3244 3320 8.271458 TGCCTATCTCACATAAAGTTTCCAATA 58.729 33.333 0.00 0.00 0.00 1.90
3245 3321 7.118723 TGCCTATCTCACATAAAGTTTCCAAT 58.881 34.615 0.00 0.00 0.00 3.16
3246 3322 6.480763 TGCCTATCTCACATAAAGTTTCCAA 58.519 36.000 0.00 0.00 0.00 3.53
3247 3323 6.061022 TGCCTATCTCACATAAAGTTTCCA 57.939 37.500 0.00 0.00 0.00 3.53
3248 3324 6.823689 TCTTGCCTATCTCACATAAAGTTTCC 59.176 38.462 0.00 0.00 0.00 3.13
3249 3325 7.334421 TGTCTTGCCTATCTCACATAAAGTTTC 59.666 37.037 0.00 0.00 0.00 2.78
3250 3326 7.168219 TGTCTTGCCTATCTCACATAAAGTTT 58.832 34.615 0.00 0.00 0.00 2.66
3251 3327 6.711277 TGTCTTGCCTATCTCACATAAAGTT 58.289 36.000 0.00 0.00 0.00 2.66
3252 3328 6.299805 TGTCTTGCCTATCTCACATAAAGT 57.700 37.500 0.00 0.00 0.00 2.66
3253 3329 6.820656 AGTTGTCTTGCCTATCTCACATAAAG 59.179 38.462 0.00 0.00 0.00 1.85
3254 3330 6.711277 AGTTGTCTTGCCTATCTCACATAAA 58.289 36.000 0.00 0.00 0.00 1.40
3255 3331 6.299805 AGTTGTCTTGCCTATCTCACATAA 57.700 37.500 0.00 0.00 0.00 1.90
3256 3332 5.450550 CGAGTTGTCTTGCCTATCTCACATA 60.451 44.000 0.00 0.00 0.00 2.29
3257 3333 4.679106 CGAGTTGTCTTGCCTATCTCACAT 60.679 45.833 0.00 0.00 0.00 3.21
3258 3334 3.367395 CGAGTTGTCTTGCCTATCTCACA 60.367 47.826 0.00 0.00 0.00 3.58
3259 3335 3.182967 CGAGTTGTCTTGCCTATCTCAC 58.817 50.000 0.00 0.00 0.00 3.51
3260 3336 2.166459 CCGAGTTGTCTTGCCTATCTCA 59.834 50.000 0.00 0.00 0.00 3.27
3261 3337 2.166664 ACCGAGTTGTCTTGCCTATCTC 59.833 50.000 0.00 0.00 0.00 2.75
3262 3338 2.180276 ACCGAGTTGTCTTGCCTATCT 58.820 47.619 0.00 0.00 0.00 1.98
3263 3339 2.674796 ACCGAGTTGTCTTGCCTATC 57.325 50.000 0.00 0.00 0.00 2.08
3264 3340 3.369157 GGTTACCGAGTTGTCTTGCCTAT 60.369 47.826 0.00 0.00 0.00 2.57
3265 3341 2.028748 GGTTACCGAGTTGTCTTGCCTA 60.029 50.000 0.00 0.00 0.00 3.93
3266 3342 1.270678 GGTTACCGAGTTGTCTTGCCT 60.271 52.381 0.00 0.00 0.00 4.75
3267 3343 1.154197 GGTTACCGAGTTGTCTTGCC 58.846 55.000 0.00 0.00 0.00 4.52
3268 3344 1.873698 TGGTTACCGAGTTGTCTTGC 58.126 50.000 0.00 0.00 0.00 4.01
3269 3345 2.546789 GGTTGGTTACCGAGTTGTCTTG 59.453 50.000 0.00 0.00 37.12 3.02
3270 3346 2.842457 GGTTGGTTACCGAGTTGTCTT 58.158 47.619 0.00 0.00 37.12 3.01
3271 3347 2.538512 GGTTGGTTACCGAGTTGTCT 57.461 50.000 0.00 0.00 37.12 3.41
3281 3357 4.178545 TCGCTACTACTTGGTTGGTTAC 57.821 45.455 0.00 0.00 0.00 2.50
3282 3358 4.870123 TTCGCTACTACTTGGTTGGTTA 57.130 40.909 0.00 0.00 0.00 2.85
3283 3359 3.756933 TTCGCTACTACTTGGTTGGTT 57.243 42.857 0.00 0.00 0.00 3.67
3284 3360 3.975168 ATTCGCTACTACTTGGTTGGT 57.025 42.857 0.00 0.00 0.00 3.67
3285 3361 6.238374 CCAAATATTCGCTACTACTTGGTTGG 60.238 42.308 0.00 0.00 0.00 3.77
3286 3362 6.715464 CCAAATATTCGCTACTACTTGGTTG 58.285 40.000 0.00 0.00 0.00 3.77
3287 3363 5.296035 GCCAAATATTCGCTACTACTTGGTT 59.704 40.000 0.00 0.00 35.55 3.67
3288 3364 4.814771 GCCAAATATTCGCTACTACTTGGT 59.185 41.667 0.00 0.00 35.55 3.67
3289 3365 4.814234 TGCCAAATATTCGCTACTACTTGG 59.186 41.667 8.47 0.00 36.08 3.61
3290 3366 5.293324 TGTGCCAAATATTCGCTACTACTTG 59.707 40.000 8.47 0.00 0.00 3.16
3291 3367 5.424757 TGTGCCAAATATTCGCTACTACTT 58.575 37.500 8.47 0.00 0.00 2.24
3292 3368 5.018539 TGTGCCAAATATTCGCTACTACT 57.981 39.130 8.47 0.00 0.00 2.57
3293 3369 5.728351 TTGTGCCAAATATTCGCTACTAC 57.272 39.130 8.47 0.90 0.00 2.73
3294 3370 5.277779 GCATTGTGCCAAATATTCGCTACTA 60.278 40.000 8.47 4.12 37.42 1.82
3295 3371 4.498009 GCATTGTGCCAAATATTCGCTACT 60.498 41.667 8.47 0.00 37.42 2.57
3296 3372 3.730715 GCATTGTGCCAAATATTCGCTAC 59.269 43.478 8.47 6.25 37.42 3.58
3297 3373 3.963665 GCATTGTGCCAAATATTCGCTA 58.036 40.909 8.47 0.00 37.42 4.26
3298 3374 2.813061 GCATTGTGCCAAATATTCGCT 58.187 42.857 8.47 0.00 37.42 4.93
3319 3395 5.411977 TCAAAAATAGGCATGCCAATGTTTG 59.588 36.000 37.18 33.06 38.92 2.93
3320 3396 5.412286 GTCAAAAATAGGCATGCCAATGTTT 59.588 36.000 37.18 26.02 38.92 2.83
3321 3397 4.937015 GTCAAAAATAGGCATGCCAATGTT 59.063 37.500 37.18 22.16 38.92 2.71
3322 3398 4.020396 TGTCAAAAATAGGCATGCCAATGT 60.020 37.500 37.18 19.98 38.92 2.71
3323 3399 4.330620 GTGTCAAAAATAGGCATGCCAATG 59.669 41.667 37.18 23.66 38.92 2.82
3324 3400 4.506758 GTGTCAAAAATAGGCATGCCAAT 58.493 39.130 37.18 21.14 38.92 3.16
3325 3401 3.306641 GGTGTCAAAAATAGGCATGCCAA 60.307 43.478 37.18 9.89 38.92 4.52
3326 3402 2.233431 GGTGTCAAAAATAGGCATGCCA 59.767 45.455 37.18 23.40 38.92 4.92
3327 3403 2.233431 TGGTGTCAAAAATAGGCATGCC 59.767 45.455 30.12 30.12 0.00 4.40
3328 3404 3.591196 TGGTGTCAAAAATAGGCATGC 57.409 42.857 9.90 9.90 0.00 4.06
3329 3405 4.690280 GGTTTGGTGTCAAAAATAGGCATG 59.310 41.667 0.00 0.00 43.56 4.06
3330 3406 4.346418 TGGTTTGGTGTCAAAAATAGGCAT 59.654 37.500 0.00 0.00 43.56 4.40
3331 3407 3.706594 TGGTTTGGTGTCAAAAATAGGCA 59.293 39.130 0.00 0.00 43.56 4.75
3332 3408 4.329462 TGGTTTGGTGTCAAAAATAGGC 57.671 40.909 0.00 0.00 43.56 3.93
3333 3409 8.934825 CATAATTGGTTTGGTGTCAAAAATAGG 58.065 33.333 0.00 0.00 43.56 2.57
3334 3410 8.442384 GCATAATTGGTTTGGTGTCAAAAATAG 58.558 33.333 0.00 0.00 43.56 1.73
3335 3411 8.153550 AGCATAATTGGTTTGGTGTCAAAAATA 58.846 29.630 0.00 0.00 43.56 1.40
3336 3412 6.997476 AGCATAATTGGTTTGGTGTCAAAAAT 59.003 30.769 0.00 0.00 43.56 1.82
3337 3413 6.352516 AGCATAATTGGTTTGGTGTCAAAAA 58.647 32.000 0.00 0.00 43.56 1.94
3338 3414 5.923204 AGCATAATTGGTTTGGTGTCAAAA 58.077 33.333 0.00 0.00 43.56 2.44
3339 3415 5.537188 GAGCATAATTGGTTTGGTGTCAAA 58.463 37.500 0.00 0.00 40.23 2.69
3340 3416 4.320861 CGAGCATAATTGGTTTGGTGTCAA 60.321 41.667 0.00 0.00 32.62 3.18
3341 3417 3.190327 CGAGCATAATTGGTTTGGTGTCA 59.810 43.478 0.00 0.00 32.62 3.58
3342 3418 3.758300 CGAGCATAATTGGTTTGGTGTC 58.242 45.455 0.00 0.00 32.62 3.67
3343 3419 2.094752 GCGAGCATAATTGGTTTGGTGT 60.095 45.455 0.00 0.00 32.62 4.16
3344 3420 2.164219 AGCGAGCATAATTGGTTTGGTG 59.836 45.455 0.00 0.00 32.62 4.17
3345 3421 2.446435 AGCGAGCATAATTGGTTTGGT 58.554 42.857 0.00 0.00 32.62 3.67
3346 3422 4.836125 ATAGCGAGCATAATTGGTTTGG 57.164 40.909 0.00 0.00 32.62 3.28
3347 3423 8.801715 ATAAAATAGCGAGCATAATTGGTTTG 57.198 30.769 0.00 0.00 32.62 2.93
3348 3424 8.629158 TGATAAAATAGCGAGCATAATTGGTTT 58.371 29.630 0.00 0.00 32.62 3.27
3349 3425 8.165239 TGATAAAATAGCGAGCATAATTGGTT 57.835 30.769 0.00 0.00 32.62 3.67
3350 3426 7.094634 CCTGATAAAATAGCGAGCATAATTGGT 60.095 37.037 0.00 0.00 35.95 3.67
3351 3427 7.246311 CCTGATAAAATAGCGAGCATAATTGG 58.754 38.462 0.00 0.00 0.00 3.16
3352 3428 6.744537 GCCTGATAAAATAGCGAGCATAATTG 59.255 38.462 0.00 0.00 0.00 2.32
3353 3429 6.656693 AGCCTGATAAAATAGCGAGCATAATT 59.343 34.615 0.00 0.00 0.00 1.40
3354 3430 6.093219 CAGCCTGATAAAATAGCGAGCATAAT 59.907 38.462 0.00 0.00 0.00 1.28
3355 3431 5.409520 CAGCCTGATAAAATAGCGAGCATAA 59.590 40.000 0.00 0.00 0.00 1.90
3356 3432 4.931601 CAGCCTGATAAAATAGCGAGCATA 59.068 41.667 0.00 0.00 0.00 3.14
3357 3433 3.750130 CAGCCTGATAAAATAGCGAGCAT 59.250 43.478 0.00 0.00 0.00 3.79
3358 3434 3.133691 CAGCCTGATAAAATAGCGAGCA 58.866 45.455 0.00 0.00 0.00 4.26
3359 3435 3.134458 ACAGCCTGATAAAATAGCGAGC 58.866 45.455 0.00 0.00 0.00 5.03
3360 3436 4.371786 TGACAGCCTGATAAAATAGCGAG 58.628 43.478 0.00 0.00 0.00 5.03
3361 3437 4.371786 CTGACAGCCTGATAAAATAGCGA 58.628 43.478 0.00 0.00 0.00 4.93
3362 3438 3.059325 GCTGACAGCCTGATAAAATAGCG 60.059 47.826 17.01 0.00 34.48 4.26
3409 3485 3.154584 TTCCGTTCGGTTGCCTCGT 62.155 57.895 11.04 0.00 0.00 4.18
3430 3506 1.129209 GTACGAAAACACCGAGCGC 59.871 57.895 0.00 0.00 0.00 5.92
3438 3514 2.880268 TCTCACTCCTCGTACGAAAACA 59.120 45.455 20.00 2.37 0.00 2.83
3808 3884 4.702196 TCCTGGTAACTATGGTTTACCCT 58.298 43.478 0.00 0.00 36.92 4.34
4110 4186 3.611057 CGTGTTCAGAACTAGCTTACCGT 60.611 47.826 14.51 0.00 0.00 4.83
4154 4230 1.064017 TGTAATTGGGTCATCAGCCCC 60.064 52.381 0.00 0.00 45.49 5.80
4195 4271 9.814899 ACTGTGATCAATAAAACACAATTTTCA 57.185 25.926 0.00 0.00 41.55 2.69
4204 4280 6.039159 TGTGCTTCACTGTGATCAATAAAACA 59.961 34.615 11.86 5.60 35.11 2.83
4230 4306 6.449635 AGAATATTTGTGTGTGTGTGTGTT 57.550 33.333 0.00 0.00 0.00 3.32
4231 4307 6.293407 GCTAGAATATTTGTGTGTGTGTGTGT 60.293 38.462 0.00 0.00 0.00 3.72
4233 4309 5.107104 CGCTAGAATATTTGTGTGTGTGTGT 60.107 40.000 0.00 0.00 0.00 3.72
4238 4314 6.164408 TGTTCGCTAGAATATTTGTGTGTG 57.836 37.500 0.00 0.00 38.80 3.82
4239 4315 6.593770 TCATGTTCGCTAGAATATTTGTGTGT 59.406 34.615 0.00 0.00 36.28 3.72
4774 4850 1.328680 CTCCGTTCGATTCCATTGCTG 59.671 52.381 0.00 0.00 0.00 4.41
4810 4886 9.254133 AGATGCAGCTATAATAGTAATAATGCG 57.746 33.333 0.55 0.00 32.78 4.73
4818 4894 8.860088 TCACAGAAAGATGCAGCTATAATAGTA 58.140 33.333 4.15 0.00 0.00 1.82
5158 5253 3.264193 TGGAAGGTGTCTGAATATGCACT 59.736 43.478 0.00 0.00 32.90 4.40
5209 5304 3.824425 TCAGCATGGCCCATCCCC 61.824 66.667 0.00 0.00 36.16 4.81
5218 5313 4.192000 GACACGAGGTCAGCATGG 57.808 61.111 0.00 0.00 46.19 3.66
5252 5347 6.815641 AGTGAACACACAGAATTAGCAGATAG 59.184 38.462 7.68 0.00 37.04 2.08
5333 5428 2.226437 CAGTTCCCACTTTCCATCAACG 59.774 50.000 0.00 0.00 0.00 4.10
5452 5547 5.993055 TCTACAGAATGAAGAATGCATCCA 58.007 37.500 0.00 0.00 27.94 3.41
5515 5610 6.182039 TGACAAGAAACAATGGATCGATTC 57.818 37.500 0.00 0.00 0.00 2.52
5519 5614 5.362556 AGTTGACAAGAAACAATGGATCG 57.637 39.130 0.00 0.00 0.00 3.69
5558 5653 5.649557 TCAAAGCGAAATGAACAATATGGG 58.350 37.500 0.00 0.00 0.00 4.00
5944 6039 4.448395 TGCATAAATCAAGCAGCAAAACAC 59.552 37.500 0.00 0.00 33.75 3.32
6407 6503 1.632409 ACGGTACAGGGTAGAGAGTGA 59.368 52.381 0.00 0.00 0.00 3.41
6409 6505 2.895242 AACGGTACAGGGTAGAGAGT 57.105 50.000 0.00 0.00 0.00 3.24
6458 6554 3.262420 CATCTTAACCAAGGGTCAGTCG 58.738 50.000 0.00 0.00 33.12 4.18
6547 6644 6.713450 ACGTTACAATTCACTAACATTTCCCT 59.287 34.615 0.00 0.00 0.00 4.20
6589 6686 4.475051 TTCCCGGAATCGACAATTCTTA 57.525 40.909 0.73 0.00 42.93 2.10
6603 6700 4.360951 ACATCAACTAACTTTTCCCGGA 57.639 40.909 0.73 0.00 0.00 5.14
6658 6804 0.318955 GCAAACCTCGCACTGCAAAT 60.319 50.000 1.11 0.00 34.87 2.32
6672 6818 0.681175 ATGAGCTTGGGTTGGCAAAC 59.319 50.000 6.75 6.75 35.40 2.93
6782 6928 2.009051 CTCGCCATGCAACACATCTTA 58.991 47.619 0.00 0.00 36.64 2.10
6800 6946 6.293698 TGGTAGAAACTTAGAAACCCAACTC 58.706 40.000 0.00 0.00 0.00 3.01
6813 6959 4.042187 AGGTCTGCTCATTGGTAGAAACTT 59.958 41.667 0.00 0.00 30.41 2.66
6847 6993 5.814783 AGCAAAGATAATGATCAAAGCGAC 58.185 37.500 0.00 0.00 34.17 5.19
6855 7437 5.988561 AGAGAACGGAGCAAAGATAATGATC 59.011 40.000 0.00 0.00 32.58 2.92
6859 7441 6.655003 TGAAAAGAGAACGGAGCAAAGATAAT 59.345 34.615 0.00 0.00 0.00 1.28
6895 7477 4.848357 ACGGTCTTTGAAGGAATGATGAT 58.152 39.130 0.00 0.00 0.00 2.45
6914 7496 3.126831 GGAGCAATGAGATACTTGACGG 58.873 50.000 0.00 0.00 0.00 4.79
6949 7531 3.691609 GCTGAGGAGTAATGAAACCCAAG 59.308 47.826 0.00 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.