Multiple sequence alignment - TraesCS3D01G232500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G232500 chr3D 100.000 3156 0 0 1 3156 319864087 319867242 0.000000e+00 5829
1 TraesCS3D01G232500 chr3D 88.604 351 36 4 2412 2761 30500007 30499660 1.050000e-114 424
2 TraesCS3D01G232500 chr3D 96.571 175 4 1 2238 2412 236629042 236628870 3.980000e-74 289
3 TraesCS3D01G232500 chr3A 92.375 2269 81 35 1 2224 405959737 405957516 0.000000e+00 3147
4 TraesCS3D01G232500 chr3A 92.286 350 26 1 2412 2761 200681495 200681147 2.190000e-136 496
5 TraesCS3D01G232500 chr3A 89.831 177 16 1 2236 2412 694966227 694966401 3.170000e-55 226
6 TraesCS3D01G232500 chr3B 92.934 1302 54 16 973 2239 400289531 400288233 0.000000e+00 1860
7 TraesCS3D01G232500 chr3B 95.965 793 23 6 191 982 400290498 400289714 0.000000e+00 1279
8 TraesCS3D01G232500 chr3B 95.429 175 6 1 2238 2412 353997425 353997253 8.620000e-71 278
9 TraesCS3D01G232500 chr3B 95.181 166 8 0 1 166 400290830 400290665 2.410000e-66 263
10 TraesCS3D01G232500 chr5A 84.003 1294 157 31 883 2161 356594684 356593426 0.000000e+00 1197
11 TraesCS3D01G232500 chr5A 90.358 363 34 1 2795 3156 613578511 613578873 2.850000e-130 475
12 TraesCS3D01G232500 chr5A 81.143 350 63 3 2800 3147 52447008 52447356 8.620000e-71 278
13 TraesCS3D01G232500 chr5D 84.654 1199 137 23 997 2161 268934481 268933296 0.000000e+00 1151
14 TraesCS3D01G232500 chr5D 92.000 350 27 1 2412 2761 477398486 477398138 1.020000e-134 490
15 TraesCS3D01G232500 chr5D 86.034 358 49 1 2800 3156 491407604 491407961 1.780000e-102 383
16 TraesCS3D01G232500 chr5D 81.714 350 61 3 2800 3147 63267822 63268170 3.980000e-74 289
17 TraesCS3D01G232500 chr5D 89.888 178 14 2 2237 2412 441231531 441231706 3.170000e-55 226
18 TraesCS3D01G232500 chr5B 84.036 1209 138 22 997 2161 304655488 304654291 0.000000e+00 1112
19 TraesCS3D01G232500 chr5B 80.495 364 68 3 2795 3156 67493095 67492733 3.100000e-70 276
20 TraesCS3D01G232500 chr2B 83.087 1082 132 20 1103 2154 632513334 632512274 0.000000e+00 937
21 TraesCS3D01G232500 chr2B 80.239 587 75 25 1103 1674 632566374 632565814 1.360000e-108 403
22 TraesCS3D01G232500 chr2B 84.167 360 55 2 2795 3153 7856634 7856276 6.480000e-92 348
23 TraesCS3D01G232500 chr2A 82.642 1060 140 26 1103 2154 677368439 677367416 0.000000e+00 898
24 TraesCS3D01G232500 chr2A 78.690 1389 209 59 872 2218 677039551 677038208 0.000000e+00 845
25 TraesCS3D01G232500 chr2A 81.370 1095 130 36 1103 2182 677069339 677068304 0.000000e+00 824
26 TraesCS3D01G232500 chr2A 81.370 1095 130 36 1103 2182 677101280 677100245 0.000000e+00 824
27 TraesCS3D01G232500 chr2A 81.370 1095 130 36 1103 2182 677157351 677156316 0.000000e+00 824
28 TraesCS3D01G232500 chr2A 81.370 1095 130 36 1103 2182 677172554 677171519 0.000000e+00 824
29 TraesCS3D01G232500 chr2A 80.408 980 146 28 1103 2067 677214982 677214034 0.000000e+00 704
30 TraesCS3D01G232500 chrUn 80.759 1133 160 36 1103 2213 253003028 253001932 0.000000e+00 832
31 TraesCS3D01G232500 chrUn 85.067 596 80 2 1559 2154 183904968 183905554 1.620000e-167 599
32 TraesCS3D01G232500 chrUn 84.899 596 81 2 1559 2154 235134949 235134363 7.540000e-166 593
33 TraesCS3D01G232500 chrUn 84.573 363 26 9 1103 1456 183904542 183904883 1.810000e-87 333
34 TraesCS3D01G232500 chrUn 84.573 363 26 8 1103 1456 235135375 235135034 1.810000e-87 333
35 TraesCS3D01G232500 chr2D 80.488 1148 160 40 1104 2225 533029803 533028694 0.000000e+00 821
36 TraesCS3D01G232500 chr6D 95.278 360 16 1 2795 3153 44496350 44496709 1.270000e-158 569
37 TraesCS3D01G232500 chr6D 90.909 176 12 3 2238 2412 11711323 11711151 1.890000e-57 233
38 TraesCS3D01G232500 chr6B 94.722 360 18 1 2795 3153 113588278 113588637 2.750000e-155 558
39 TraesCS3D01G232500 chr6B 90.857 350 32 0 2412 2761 612269055 612268706 1.330000e-128 470
40 TraesCS3D01G232500 chr6A 94.490 363 19 1 2795 3156 59320566 59320928 2.750000e-155 558
41 TraesCS3D01G232500 chr1D 92.023 351 27 1 2411 2761 405082680 405082331 2.830000e-135 492
42 TraesCS3D01G232500 chr1D 89.189 185 16 3 2231 2415 378551662 378551842 8.810000e-56 228
43 TraesCS3D01G232500 chr7D 92.560 336 23 2 2412 2746 135936320 135936654 6.120000e-132 481
44 TraesCS3D01G232500 chr7D 93.182 308 20 1 2439 2746 4599020 4599326 4.800000e-123 451
45 TraesCS3D01G232500 chr4A 91.940 335 26 1 2412 2746 589487151 589487484 4.770000e-128 468
46 TraesCS3D01G232500 chr4A 90.341 176 15 1 2237 2412 723856404 723856577 2.450000e-56 230
47 TraesCS3D01G232500 chr4D 91.691 337 24 4 2412 2746 300858938 300859272 6.170000e-127 464
48 TraesCS3D01G232500 chr4D 90.341 176 15 1 2237 2412 370775682 370775509 2.450000e-56 230
49 TraesCS3D01G232500 chr7B 93.143 175 10 1 2238 2412 7711336 7711164 4.040000e-64 255


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G232500 chr3D 319864087 319867242 3155 False 5829 5829 100.000000 1 3156 1 chr3D.!!$F1 3155
1 TraesCS3D01G232500 chr3A 405957516 405959737 2221 True 3147 3147 92.375000 1 2224 1 chr3A.!!$R2 2223
2 TraesCS3D01G232500 chr3B 400288233 400290830 2597 True 1134 1860 94.693333 1 2239 3 chr3B.!!$R2 2238
3 TraesCS3D01G232500 chr5A 356593426 356594684 1258 True 1197 1197 84.003000 883 2161 1 chr5A.!!$R1 1278
4 TraesCS3D01G232500 chr5D 268933296 268934481 1185 True 1151 1151 84.654000 997 2161 1 chr5D.!!$R1 1164
5 TraesCS3D01G232500 chr5B 304654291 304655488 1197 True 1112 1112 84.036000 997 2161 1 chr5B.!!$R2 1164
6 TraesCS3D01G232500 chr2B 632512274 632513334 1060 True 937 937 83.087000 1103 2154 1 chr2B.!!$R2 1051
7 TraesCS3D01G232500 chr2B 632565814 632566374 560 True 403 403 80.239000 1103 1674 1 chr2B.!!$R3 571
8 TraesCS3D01G232500 chr2A 677367416 677368439 1023 True 898 898 82.642000 1103 2154 1 chr2A.!!$R7 1051
9 TraesCS3D01G232500 chr2A 677038208 677039551 1343 True 845 845 78.690000 872 2218 1 chr2A.!!$R1 1346
10 TraesCS3D01G232500 chr2A 677068304 677069339 1035 True 824 824 81.370000 1103 2182 1 chr2A.!!$R2 1079
11 TraesCS3D01G232500 chr2A 677100245 677101280 1035 True 824 824 81.370000 1103 2182 1 chr2A.!!$R3 1079
12 TraesCS3D01G232500 chr2A 677156316 677157351 1035 True 824 824 81.370000 1103 2182 1 chr2A.!!$R4 1079
13 TraesCS3D01G232500 chr2A 677171519 677172554 1035 True 824 824 81.370000 1103 2182 1 chr2A.!!$R5 1079
14 TraesCS3D01G232500 chr2A 677214034 677214982 948 True 704 704 80.408000 1103 2067 1 chr2A.!!$R6 964
15 TraesCS3D01G232500 chrUn 253001932 253003028 1096 True 832 832 80.759000 1103 2213 1 chrUn.!!$R1 1110
16 TraesCS3D01G232500 chrUn 183904542 183905554 1012 False 466 599 84.820000 1103 2154 2 chrUn.!!$F1 1051
17 TraesCS3D01G232500 chrUn 235134363 235135375 1012 True 463 593 84.736000 1103 2154 2 chrUn.!!$R2 1051
18 TraesCS3D01G232500 chr2D 533028694 533029803 1109 True 821 821 80.488000 1104 2225 1 chr2D.!!$R1 1121

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
390 537 2.032620 ACAGAGCCGTCTACAATAGGG 58.967 52.381 0.0 0.0 0.00 3.53 F
677 824 2.284039 TACGTAGTGGGCTGGGCA 60.284 61.111 0.0 0.0 45.73 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1275 1674 0.250597 TCTCCAGGAACTCGTCGTCA 60.251 55.0 0.0 0.0 34.6 4.35 R
2442 2988 0.034337 TAGTTCTGTGGGACGGCAAC 59.966 55.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 3.668447 TCAGTTGAGATGGAAGAAGTGC 58.332 45.455 0.00 0.00 0.00 4.40
187 312 9.469807 AAGTATAAGCATATCGCAATAGATAGC 57.530 33.333 0.00 0.00 46.13 2.97
220 363 2.226200 TGAATTCACCGTGACAATGCTG 59.774 45.455 3.38 0.00 0.00 4.41
309 452 5.201713 TGGCACGTTCAATCCAAATAAAA 57.798 34.783 0.00 0.00 0.00 1.52
342 485 2.275318 GCAGTAGGCAGATGACAGTTC 58.725 52.381 0.00 0.00 43.97 3.01
390 537 2.032620 ACAGAGCCGTCTACAATAGGG 58.967 52.381 0.00 0.00 0.00 3.53
419 566 4.213270 CACTCTACGCAATTCTGTTGGAAA 59.787 41.667 0.00 0.00 37.49 3.13
560 707 4.039488 AGAATGGACAAGCAATCAAGCAAA 59.961 37.500 0.00 0.00 36.85 3.68
677 824 2.284039 TACGTAGTGGGCTGGGCA 60.284 61.111 0.00 0.00 45.73 5.36
756 904 4.391155 AGAAGATACTACTGCTACCGAGG 58.609 47.826 0.00 0.00 0.00 4.63
1275 1674 0.178958 ACCAGTTCTCCGACCTCACT 60.179 55.000 0.00 0.00 0.00 3.41
1523 2021 0.302890 CGCCAGAGCTCGCAAATTAG 59.697 55.000 8.37 0.00 36.60 1.73
1524 2022 0.659957 GCCAGAGCTCGCAAATTAGG 59.340 55.000 8.37 2.98 35.50 2.69
1717 2243 2.511600 GCCGCACTCCGCTATGTT 60.512 61.111 0.00 0.00 39.08 2.71
1945 2480 2.261671 CACTACAGGAGCGGCGTT 59.738 61.111 9.37 0.48 0.00 4.84
2202 2748 2.509052 TCGGTGGATCATCGAACATC 57.491 50.000 0.44 0.00 44.22 3.06
2246 2792 3.861341 GCAACTGCATACTCCCTCA 57.139 52.632 0.00 0.00 41.59 3.86
2247 2793 2.113860 GCAACTGCATACTCCCTCAA 57.886 50.000 0.00 0.00 41.59 3.02
2248 2794 2.648059 GCAACTGCATACTCCCTCAAT 58.352 47.619 0.00 0.00 41.59 2.57
2249 2795 2.615912 GCAACTGCATACTCCCTCAATC 59.384 50.000 0.00 0.00 41.59 2.67
2250 2796 3.683847 GCAACTGCATACTCCCTCAATCT 60.684 47.826 0.00 0.00 41.59 2.40
2251 2797 4.443457 GCAACTGCATACTCCCTCAATCTA 60.443 45.833 0.00 0.00 41.59 1.98
2252 2798 5.744300 GCAACTGCATACTCCCTCAATCTAT 60.744 44.000 0.00 0.00 41.59 1.98
2253 2799 6.519043 GCAACTGCATACTCCCTCAATCTATA 60.519 42.308 0.00 0.00 41.59 1.31
2254 2800 7.619050 CAACTGCATACTCCCTCAATCTATAT 58.381 38.462 0.00 0.00 0.00 0.86
2255 2801 8.753133 CAACTGCATACTCCCTCAATCTATATA 58.247 37.037 0.00 0.00 0.00 0.86
2256 2802 9.499369 AACTGCATACTCCCTCAATCTATATAT 57.501 33.333 0.00 0.00 0.00 0.86
2259 2805 9.936329 TGCATACTCCCTCAATCTATATATACA 57.064 33.333 0.00 0.00 0.00 2.29
2265 2811 8.958060 TCCCTCAATCTATATATACATAGGGC 57.042 38.462 9.49 0.00 39.86 5.19
2266 2812 7.956315 TCCCTCAATCTATATATACATAGGGCC 59.044 40.741 9.49 0.00 39.86 5.80
2267 2813 7.958583 CCCTCAATCTATATATACATAGGGCCT 59.041 40.741 12.58 12.58 34.00 5.19
2301 2847 9.932207 TTTTTGAGATTGCATTTGAGTATTGAT 57.068 25.926 0.00 0.00 0.00 2.57
2305 2851 9.617523 TGAGATTGCATTTGAGTATTGATAAGA 57.382 29.630 0.00 0.00 0.00 2.10
2362 2908 9.877178 ATTATATTATTAGGAGCTCCTTTCACG 57.123 33.333 39.23 0.00 46.09 4.35
2363 2909 5.615925 ATTATTAGGAGCTCCTTTCACGT 57.384 39.130 39.23 20.17 46.09 4.49
2364 2910 6.726490 ATTATTAGGAGCTCCTTTCACGTA 57.274 37.500 39.23 17.87 46.09 3.57
2365 2911 3.863142 TTAGGAGCTCCTTTCACGTAC 57.137 47.619 39.23 5.85 46.09 3.67
2366 2912 0.526662 AGGAGCTCCTTTCACGTACG 59.473 55.000 30.40 15.01 46.09 3.67
2367 2913 0.524862 GGAGCTCCTTTCACGTACGA 59.475 55.000 26.25 0.00 0.00 3.43
2368 2914 1.068055 GGAGCTCCTTTCACGTACGAA 60.068 52.381 26.25 3.37 0.00 3.85
2369 2915 2.416972 GGAGCTCCTTTCACGTACGAAT 60.417 50.000 26.25 0.00 0.00 3.34
2370 2916 3.251571 GAGCTCCTTTCACGTACGAATT 58.748 45.455 24.41 0.00 0.00 2.17
2371 2917 3.660865 AGCTCCTTTCACGTACGAATTT 58.339 40.909 24.41 0.00 0.00 1.82
2372 2918 3.432252 AGCTCCTTTCACGTACGAATTTG 59.568 43.478 24.41 9.92 0.00 2.32
2373 2919 3.430895 GCTCCTTTCACGTACGAATTTGA 59.569 43.478 24.41 12.38 0.00 2.69
2374 2920 4.665897 GCTCCTTTCACGTACGAATTTGAC 60.666 45.833 24.41 0.00 0.00 3.18
2375 2921 3.426191 TCCTTTCACGTACGAATTTGACG 59.574 43.478 24.41 8.40 42.22 4.35
2376 2922 3.422603 CCTTTCACGTACGAATTTGACGG 60.423 47.826 24.41 13.22 40.84 4.79
2377 2923 2.420628 TCACGTACGAATTTGACGGT 57.579 45.000 24.41 0.00 40.84 4.83
2378 2924 3.550950 TCACGTACGAATTTGACGGTA 57.449 42.857 24.41 0.00 40.84 4.02
2379 2925 4.095410 TCACGTACGAATTTGACGGTAT 57.905 40.909 24.41 0.00 40.84 2.73
2380 2926 3.853103 TCACGTACGAATTTGACGGTATG 59.147 43.478 24.41 4.75 40.84 2.39
2381 2927 2.599973 ACGTACGAATTTGACGGTATGC 59.400 45.455 24.41 0.00 40.84 3.14
2382 2928 2.855963 CGTACGAATTTGACGGTATGCT 59.144 45.455 10.44 0.00 33.01 3.79
2383 2929 3.305094 CGTACGAATTTGACGGTATGCTT 59.695 43.478 10.44 0.00 33.01 3.91
2384 2930 4.201647 CGTACGAATTTGACGGTATGCTTT 60.202 41.667 10.44 0.00 33.01 3.51
2385 2931 4.078363 ACGAATTTGACGGTATGCTTTG 57.922 40.909 0.00 0.00 34.93 2.77
2386 2932 3.500680 ACGAATTTGACGGTATGCTTTGT 59.499 39.130 0.00 0.00 34.93 2.83
2387 2933 3.845775 CGAATTTGACGGTATGCTTTGTG 59.154 43.478 0.00 0.00 0.00 3.33
2388 2934 4.612712 CGAATTTGACGGTATGCTTTGTGT 60.613 41.667 0.00 0.00 0.00 3.72
2389 2935 5.390040 CGAATTTGACGGTATGCTTTGTGTA 60.390 40.000 0.00 0.00 0.00 2.90
2390 2936 5.950758 ATTTGACGGTATGCTTTGTGTAA 57.049 34.783 0.00 0.00 0.00 2.41
2391 2937 4.735662 TTGACGGTATGCTTTGTGTAAC 57.264 40.909 0.00 0.00 37.35 2.50
2392 2938 3.997762 TGACGGTATGCTTTGTGTAACT 58.002 40.909 0.00 0.00 38.04 2.24
2393 2939 4.382291 TGACGGTATGCTTTGTGTAACTT 58.618 39.130 0.00 0.00 38.04 2.66
2394 2940 4.212425 TGACGGTATGCTTTGTGTAACTTG 59.788 41.667 0.00 0.00 38.04 3.16
2395 2941 3.058501 ACGGTATGCTTTGTGTAACTTGC 60.059 43.478 0.00 0.00 38.04 4.01
2396 2942 3.058570 CGGTATGCTTTGTGTAACTTGCA 60.059 43.478 0.00 0.00 39.97 4.08
2397 2943 4.379394 CGGTATGCTTTGTGTAACTTGCAT 60.379 41.667 0.00 0.00 44.54 3.96
2398 2944 4.858692 GGTATGCTTTGTGTAACTTGCATG 59.141 41.667 8.29 0.00 43.24 4.06
2399 2945 4.589216 ATGCTTTGTGTAACTTGCATGT 57.411 36.364 0.00 0.00 42.42 3.21
2400 2946 3.963665 TGCTTTGTGTAACTTGCATGTC 58.036 40.909 5.61 0.00 38.04 3.06
2401 2947 3.379688 TGCTTTGTGTAACTTGCATGTCA 59.620 39.130 5.61 0.00 38.04 3.58
2402 2948 4.037803 TGCTTTGTGTAACTTGCATGTCAT 59.962 37.500 5.61 0.00 38.04 3.06
2403 2949 5.240403 TGCTTTGTGTAACTTGCATGTCATA 59.760 36.000 5.61 0.00 38.04 2.15
2404 2950 6.072008 TGCTTTGTGTAACTTGCATGTCATAT 60.072 34.615 5.61 0.00 38.04 1.78
2405 2951 7.120432 TGCTTTGTGTAACTTGCATGTCATATA 59.880 33.333 5.61 0.00 38.04 0.86
2406 2952 8.131100 GCTTTGTGTAACTTGCATGTCATATAT 58.869 33.333 5.61 0.00 38.04 0.86
2446 2992 2.801077 ACTACCACATTAGGGGTTGC 57.199 50.000 0.00 0.00 38.60 4.17
2447 2993 1.283905 ACTACCACATTAGGGGTTGCC 59.716 52.381 0.00 0.00 38.60 4.52
2448 2994 0.253610 TACCACATTAGGGGTTGCCG 59.746 55.000 0.00 0.00 38.60 5.69
2449 2995 1.001393 CCACATTAGGGGTTGCCGT 60.001 57.895 0.00 0.00 0.00 5.68
2450 2996 1.029947 CCACATTAGGGGTTGCCGTC 61.030 60.000 0.00 0.00 0.00 4.79
2451 2997 1.029947 CACATTAGGGGTTGCCGTCC 61.030 60.000 0.00 0.00 0.00 4.79
2452 2998 1.453197 CATTAGGGGTTGCCGTCCC 60.453 63.158 0.00 0.00 43.90 4.46
2453 2999 1.926489 ATTAGGGGTTGCCGTCCCA 60.926 57.895 9.59 0.00 46.26 4.37
2454 3000 2.206182 ATTAGGGGTTGCCGTCCCAC 62.206 60.000 9.59 1.00 46.26 4.61
2457 3003 3.948719 GGGTTGCCGTCCCACAGA 61.949 66.667 3.52 0.00 44.05 3.41
2458 3004 2.112297 GGTTGCCGTCCCACAGAA 59.888 61.111 0.00 0.00 0.00 3.02
2459 3005 2.258726 GGTTGCCGTCCCACAGAAC 61.259 63.158 0.00 0.00 0.00 3.01
2460 3006 1.227853 GTTGCCGTCCCACAGAACT 60.228 57.895 0.00 0.00 0.00 3.01
2461 3007 0.034337 GTTGCCGTCCCACAGAACTA 59.966 55.000 0.00 0.00 0.00 2.24
2462 3008 0.981183 TTGCCGTCCCACAGAACTAT 59.019 50.000 0.00 0.00 0.00 2.12
2463 3009 0.535335 TGCCGTCCCACAGAACTATC 59.465 55.000 0.00 0.00 0.00 2.08
2464 3010 0.535335 GCCGTCCCACAGAACTATCA 59.465 55.000 0.00 0.00 0.00 2.15
2465 3011 1.739371 GCCGTCCCACAGAACTATCAC 60.739 57.143 0.00 0.00 0.00 3.06
2466 3012 1.548719 CCGTCCCACAGAACTATCACA 59.451 52.381 0.00 0.00 0.00 3.58
2467 3013 2.168521 CCGTCCCACAGAACTATCACAT 59.831 50.000 0.00 0.00 0.00 3.21
2468 3014 3.369471 CCGTCCCACAGAACTATCACATT 60.369 47.826 0.00 0.00 0.00 2.71
2469 3015 3.865745 CGTCCCACAGAACTATCACATTC 59.134 47.826 0.00 0.00 0.00 2.67
2470 3016 4.620567 CGTCCCACAGAACTATCACATTCA 60.621 45.833 0.00 0.00 0.00 2.57
2471 3017 5.245531 GTCCCACAGAACTATCACATTCAA 58.754 41.667 0.00 0.00 0.00 2.69
2472 3018 5.705441 GTCCCACAGAACTATCACATTCAAA 59.295 40.000 0.00 0.00 0.00 2.69
2473 3019 6.206634 GTCCCACAGAACTATCACATTCAAAA 59.793 38.462 0.00 0.00 0.00 2.44
2474 3020 6.775142 TCCCACAGAACTATCACATTCAAAAA 59.225 34.615 0.00 0.00 0.00 1.94
2501 3047 9.574516 AGTGACTGATAACTACCAAAAATTTCT 57.425 29.630 0.00 0.00 0.00 2.52
2530 3076 8.859517 TTTGGAACTAAAAATTACCACTTTCG 57.140 30.769 0.00 0.00 0.00 3.46
2531 3077 7.804843 TGGAACTAAAAATTACCACTTTCGA 57.195 32.000 0.00 0.00 0.00 3.71
2532 3078 8.223177 TGGAACTAAAAATTACCACTTTCGAA 57.777 30.769 0.00 0.00 0.00 3.71
2533 3079 8.684520 TGGAACTAAAAATTACCACTTTCGAAA 58.315 29.630 10.71 10.71 0.00 3.46
2534 3080 9.518906 GGAACTAAAAATTACCACTTTCGAAAA 57.481 29.630 12.41 0.00 0.00 2.29
2541 3087 8.447787 AAATTACCACTTTCGAAAAATGATCG 57.552 30.769 18.75 6.48 41.53 3.69
2542 3088 4.419522 ACCACTTTCGAAAAATGATCGG 57.580 40.909 18.75 11.00 40.59 4.18
2543 3089 3.818773 ACCACTTTCGAAAAATGATCGGT 59.181 39.130 18.75 11.49 40.59 4.69
2544 3090 4.277423 ACCACTTTCGAAAAATGATCGGTT 59.723 37.500 18.75 0.00 40.59 4.44
2545 3091 5.219633 CCACTTTCGAAAAATGATCGGTTT 58.780 37.500 18.75 0.00 40.59 3.27
2546 3092 6.016943 ACCACTTTCGAAAAATGATCGGTTTA 60.017 34.615 18.75 0.00 40.59 2.01
2547 3093 6.523201 CCACTTTCGAAAAATGATCGGTTTAG 59.477 38.462 18.75 3.43 40.59 1.85
2548 3094 7.295201 CACTTTCGAAAAATGATCGGTTTAGA 58.705 34.615 12.41 0.00 40.59 2.10
2549 3095 7.268447 CACTTTCGAAAAATGATCGGTTTAGAC 59.732 37.037 12.41 0.00 40.59 2.59
2550 3096 5.444586 TCGAAAAATGATCGGTTTAGACG 57.555 39.130 0.00 0.00 40.59 4.18
2551 3097 5.162794 TCGAAAAATGATCGGTTTAGACGA 58.837 37.500 0.00 0.00 45.19 4.20
2561 3107 5.499268 TCGGTTTAGACGATTTAAACACG 57.501 39.130 16.66 12.82 40.87 4.49
2562 3108 4.981674 TCGGTTTAGACGATTTAAACACGT 59.018 37.500 17.84 17.84 40.87 4.49
2563 3109 5.461737 TCGGTTTAGACGATTTAAACACGTT 59.538 36.000 18.51 12.79 40.87 3.99
2564 3110 6.019156 TCGGTTTAGACGATTTAAACACGTTT 60.019 34.615 18.51 16.10 40.87 3.60
2565 3111 7.168302 TCGGTTTAGACGATTTAAACACGTTTA 59.832 33.333 18.51 15.35 40.87 2.01
2566 3112 7.951565 CGGTTTAGACGATTTAAACACGTTTAT 59.048 33.333 18.51 12.46 40.87 1.40
2567 3113 9.043678 GGTTTAGACGATTTAAACACGTTTATG 57.956 33.333 18.51 0.00 40.87 1.90
2568 3114 9.796062 GTTTAGACGATTTAAACACGTTTATGA 57.204 29.630 18.51 9.77 39.58 2.15
2569 3115 9.796062 TTTAGACGATTTAAACACGTTTATGAC 57.204 29.630 18.51 8.72 40.29 3.06
2570 3116 7.410800 AGACGATTTAAACACGTTTATGACA 57.589 32.000 18.51 0.00 40.29 3.58
2571 3117 8.025243 AGACGATTTAAACACGTTTATGACAT 57.975 30.769 18.51 0.00 40.29 3.06
2572 3118 7.955324 AGACGATTTAAACACGTTTATGACATG 59.045 33.333 18.51 0.00 40.29 3.21
2573 3119 6.521821 ACGATTTAAACACGTTTATGACATGC 59.478 34.615 13.87 0.00 36.91 4.06
2574 3120 6.289821 CGATTTAAACACGTTTATGACATGCG 60.290 38.462 3.35 3.03 35.27 4.73
2575 3121 2.892373 AACACGTTTATGACATGCGG 57.108 45.000 0.00 0.00 0.00 5.69
2576 3122 1.083489 ACACGTTTATGACATGCGGG 58.917 50.000 0.00 4.08 0.00 6.13
2577 3123 1.338294 ACACGTTTATGACATGCGGGA 60.338 47.619 14.86 0.00 0.00 5.14
2578 3124 1.062002 CACGTTTATGACATGCGGGAC 59.938 52.381 0.00 0.00 0.00 4.46
2579 3125 0.655733 CGTTTATGACATGCGGGACC 59.344 55.000 0.00 0.00 0.00 4.46
2580 3126 1.021968 GTTTATGACATGCGGGACCC 58.978 55.000 0.00 0.00 0.00 4.46
2581 3127 0.621082 TTTATGACATGCGGGACCCA 59.379 50.000 12.15 0.00 0.00 4.51
2582 3128 0.107410 TTATGACATGCGGGACCCAC 60.107 55.000 12.15 0.13 0.00 4.61
2583 3129 1.978455 TATGACATGCGGGACCCACC 61.978 60.000 12.15 0.76 38.08 4.61
2610 3156 4.961511 TGACGTGGCGGCACAGTC 62.962 66.667 36.13 36.13 41.22 3.51
2611 3157 4.961511 GACGTGGCGGCACAGTCA 62.962 66.667 36.89 10.51 33.63 3.41
2612 3158 4.539083 ACGTGGCGGCACAGTCAA 62.539 61.111 36.79 0.09 0.00 3.18
2613 3159 4.012895 CGTGGCGGCACAGTCAAC 62.013 66.667 36.79 12.80 0.00 3.18
2614 3160 2.591715 GTGGCGGCACAGTCAACT 60.592 61.111 34.40 0.00 0.00 3.16
2615 3161 2.280797 TGGCGGCACAGTCAACTC 60.281 61.111 7.97 0.00 0.00 3.01
2616 3162 2.031163 GGCGGCACAGTCAACTCT 59.969 61.111 3.07 0.00 0.00 3.24
2617 3163 2.320587 GGCGGCACAGTCAACTCTG 61.321 63.158 3.07 0.00 40.80 3.35
2619 3165 1.160329 GCGGCACAGTCAACTCTGTT 61.160 55.000 0.00 0.00 44.92 3.16
2620 3166 1.299541 CGGCACAGTCAACTCTGTTT 58.700 50.000 0.00 0.00 44.92 2.83
2621 3167 2.479837 CGGCACAGTCAACTCTGTTTA 58.520 47.619 0.00 0.00 44.92 2.01
2622 3168 3.067106 CGGCACAGTCAACTCTGTTTAT 58.933 45.455 0.00 0.00 44.92 1.40
2623 3169 3.498397 CGGCACAGTCAACTCTGTTTATT 59.502 43.478 0.00 0.00 44.92 1.40
2624 3170 4.024048 CGGCACAGTCAACTCTGTTTATTT 60.024 41.667 0.00 0.00 44.92 1.40
2625 3171 5.505654 CGGCACAGTCAACTCTGTTTATTTT 60.506 40.000 0.00 0.00 44.92 1.82
2626 3172 5.687285 GGCACAGTCAACTCTGTTTATTTTG 59.313 40.000 0.00 0.00 44.92 2.44
2627 3173 6.459573 GGCACAGTCAACTCTGTTTATTTTGA 60.460 38.462 0.00 0.00 44.92 2.69
2628 3174 6.414987 GCACAGTCAACTCTGTTTATTTTGAC 59.585 38.462 4.90 4.90 44.92 3.18
2629 3175 6.912591 CACAGTCAACTCTGTTTATTTTGACC 59.087 38.462 8.72 0.00 44.92 4.02
2630 3176 6.136071 CAGTCAACTCTGTTTATTTTGACCG 58.864 40.000 8.72 0.00 44.69 4.79
2631 3177 4.909880 GTCAACTCTGTTTATTTTGACCGC 59.090 41.667 0.00 0.00 40.01 5.68
2632 3178 4.819630 TCAACTCTGTTTATTTTGACCGCT 59.180 37.500 0.00 0.00 0.00 5.52
2633 3179 5.992829 TCAACTCTGTTTATTTTGACCGCTA 59.007 36.000 0.00 0.00 0.00 4.26
2634 3180 6.483974 TCAACTCTGTTTATTTTGACCGCTAA 59.516 34.615 0.00 0.00 0.00 3.09
2635 3181 6.481954 ACTCTGTTTATTTTGACCGCTAAG 57.518 37.500 0.00 0.00 0.00 2.18
2636 3182 5.995897 ACTCTGTTTATTTTGACCGCTAAGT 59.004 36.000 0.00 0.00 0.00 2.24
2637 3183 6.485648 ACTCTGTTTATTTTGACCGCTAAGTT 59.514 34.615 0.00 0.00 0.00 2.66
2638 3184 6.664515 TCTGTTTATTTTGACCGCTAAGTTG 58.335 36.000 0.00 0.00 0.00 3.16
2639 3185 6.483974 TCTGTTTATTTTGACCGCTAAGTTGA 59.516 34.615 0.00 0.00 0.00 3.18
2640 3186 6.432107 TGTTTATTTTGACCGCTAAGTTGAC 58.568 36.000 0.00 0.00 0.00 3.18
2641 3187 5.616488 TTATTTTGACCGCTAAGTTGACC 57.384 39.130 0.00 0.00 0.00 4.02
2642 3188 1.504359 TTTGACCGCTAAGTTGACCG 58.496 50.000 0.00 0.00 0.00 4.79
2643 3189 0.390124 TTGACCGCTAAGTTGACCGT 59.610 50.000 0.00 0.00 0.00 4.83
2644 3190 0.390124 TGACCGCTAAGTTGACCGTT 59.610 50.000 0.00 0.00 0.00 4.44
2645 3191 1.612950 TGACCGCTAAGTTGACCGTTA 59.387 47.619 0.00 0.00 0.00 3.18
2646 3192 2.231964 TGACCGCTAAGTTGACCGTTAT 59.768 45.455 0.00 0.00 0.00 1.89
2647 3193 2.601763 GACCGCTAAGTTGACCGTTATG 59.398 50.000 0.00 0.00 0.00 1.90
2648 3194 1.326548 CCGCTAAGTTGACCGTTATGC 59.673 52.381 0.00 0.00 0.00 3.14
2649 3195 1.326548 CGCTAAGTTGACCGTTATGCC 59.673 52.381 0.00 0.00 0.00 4.40
2650 3196 2.352388 GCTAAGTTGACCGTTATGCCA 58.648 47.619 0.00 0.00 0.00 4.92
2651 3197 2.351726 GCTAAGTTGACCGTTATGCCAG 59.648 50.000 0.00 0.00 0.00 4.85
2652 3198 1.821216 AAGTTGACCGTTATGCCAGG 58.179 50.000 0.00 0.00 0.00 4.45
2653 3199 0.690762 AGTTGACCGTTATGCCAGGT 59.309 50.000 0.00 0.00 41.63 4.00
2654 3200 0.802494 GTTGACCGTTATGCCAGGTG 59.198 55.000 0.00 0.00 38.57 4.00
2655 3201 0.322098 TTGACCGTTATGCCAGGTGG 60.322 55.000 0.00 0.00 38.57 4.61
2656 3202 1.451387 GACCGTTATGCCAGGTGGG 60.451 63.158 0.00 0.00 38.57 4.61
2657 3203 2.124320 CCGTTATGCCAGGTGGGG 60.124 66.667 0.00 0.00 37.04 4.96
2672 3218 4.309950 GGGCCCACACGTCGTTCT 62.310 66.667 19.95 0.00 0.00 3.01
2673 3219 2.280592 GGCCCACACGTCGTTCTT 60.281 61.111 0.00 0.00 0.00 2.52
2674 3220 2.315386 GGCCCACACGTCGTTCTTC 61.315 63.158 0.00 0.00 0.00 2.87
2675 3221 1.300697 GCCCACACGTCGTTCTTCT 60.301 57.895 0.00 0.00 0.00 2.85
2676 3222 0.878961 GCCCACACGTCGTTCTTCTT 60.879 55.000 0.00 0.00 0.00 2.52
2677 3223 1.137513 CCCACACGTCGTTCTTCTTC 58.862 55.000 0.00 0.00 0.00 2.87
2678 3224 1.137513 CCACACGTCGTTCTTCTTCC 58.862 55.000 0.00 0.00 0.00 3.46
2679 3225 1.269621 CCACACGTCGTTCTTCTTCCT 60.270 52.381 0.00 0.00 0.00 3.36
2680 3226 2.052157 CACACGTCGTTCTTCTTCCTC 58.948 52.381 0.00 0.00 0.00 3.71
2681 3227 1.000496 ACACGTCGTTCTTCTTCCTCC 60.000 52.381 0.00 0.00 0.00 4.30
2682 3228 1.269998 CACGTCGTTCTTCTTCCTCCT 59.730 52.381 0.00 0.00 0.00 3.69
2683 3229 1.540707 ACGTCGTTCTTCTTCCTCCTC 59.459 52.381 0.00 0.00 0.00 3.71
2684 3230 1.813786 CGTCGTTCTTCTTCCTCCTCT 59.186 52.381 0.00 0.00 0.00 3.69
2685 3231 2.159490 CGTCGTTCTTCTTCCTCCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
2686 3232 3.086282 GTCGTTCTTCTTCCTCCTCTCT 58.914 50.000 0.00 0.00 0.00 3.10
2687 3233 3.085533 TCGTTCTTCTTCCTCCTCTCTG 58.914 50.000 0.00 0.00 0.00 3.35
2688 3234 2.823154 CGTTCTTCTTCCTCCTCTCTGT 59.177 50.000 0.00 0.00 0.00 3.41
2689 3235 4.011023 CGTTCTTCTTCCTCCTCTCTGTA 58.989 47.826 0.00 0.00 0.00 2.74
2690 3236 4.642885 CGTTCTTCTTCCTCCTCTCTGTAT 59.357 45.833 0.00 0.00 0.00 2.29
2691 3237 5.220970 CGTTCTTCTTCCTCCTCTCTGTATC 60.221 48.000 0.00 0.00 0.00 2.24
2692 3238 5.725551 TCTTCTTCCTCCTCTCTGTATCT 57.274 43.478 0.00 0.00 0.00 1.98
2693 3239 6.086011 TCTTCTTCCTCCTCTCTGTATCTT 57.914 41.667 0.00 0.00 0.00 2.40
2694 3240 6.498538 TCTTCTTCCTCCTCTCTGTATCTTT 58.501 40.000 0.00 0.00 0.00 2.52
2695 3241 6.605594 TCTTCTTCCTCCTCTCTGTATCTTTC 59.394 42.308 0.00 0.00 0.00 2.62
2696 3242 6.086011 TCTTCCTCCTCTCTGTATCTTTCT 57.914 41.667 0.00 0.00 0.00 2.52
2697 3243 6.498538 TCTTCCTCCTCTCTGTATCTTTCTT 58.501 40.000 0.00 0.00 0.00 2.52
2698 3244 6.957020 TCTTCCTCCTCTCTGTATCTTTCTTT 59.043 38.462 0.00 0.00 0.00 2.52
2699 3245 6.537453 TCCTCCTCTCTGTATCTTTCTTTG 57.463 41.667 0.00 0.00 0.00 2.77
2700 3246 5.423610 TCCTCCTCTCTGTATCTTTCTTTGG 59.576 44.000 0.00 0.00 0.00 3.28
2701 3247 5.091261 TCCTCTCTGTATCTTTCTTTGGC 57.909 43.478 0.00 0.00 0.00 4.52
2702 3248 4.532126 TCCTCTCTGTATCTTTCTTTGGCA 59.468 41.667 0.00 0.00 0.00 4.92
2703 3249 5.190528 TCCTCTCTGTATCTTTCTTTGGCAT 59.809 40.000 0.00 0.00 0.00 4.40
2704 3250 5.884792 CCTCTCTGTATCTTTCTTTGGCATT 59.115 40.000 0.00 0.00 0.00 3.56
2705 3251 6.376581 CCTCTCTGTATCTTTCTTTGGCATTT 59.623 38.462 0.00 0.00 0.00 2.32
2706 3252 7.094032 CCTCTCTGTATCTTTCTTTGGCATTTT 60.094 37.037 0.00 0.00 0.00 1.82
2707 3253 8.862325 TCTCTGTATCTTTCTTTGGCATTTTA 57.138 30.769 0.00 0.00 0.00 1.52
2708 3254 8.730680 TCTCTGTATCTTTCTTTGGCATTTTAC 58.269 33.333 0.00 0.00 0.00 2.01
2709 3255 7.826690 TCTGTATCTTTCTTTGGCATTTTACC 58.173 34.615 0.00 0.00 0.00 2.85
2710 3256 7.450014 TCTGTATCTTTCTTTGGCATTTTACCA 59.550 33.333 0.00 0.00 34.65 3.25
2711 3257 7.957002 TGTATCTTTCTTTGGCATTTTACCAA 58.043 30.769 0.00 0.00 45.37 3.67
2718 3264 4.329462 TTGGCATTTTACCAAACACCTC 57.671 40.909 0.00 0.00 44.11 3.85
2719 3265 3.300388 TGGCATTTTACCAAACACCTCA 58.700 40.909 0.00 0.00 33.12 3.86
2720 3266 3.900601 TGGCATTTTACCAAACACCTCAT 59.099 39.130 0.00 0.00 33.12 2.90
2721 3267 4.244862 GGCATTTTACCAAACACCTCATG 58.755 43.478 0.00 0.00 0.00 3.07
2722 3268 4.262420 GGCATTTTACCAAACACCTCATGT 60.262 41.667 0.00 0.00 46.42 3.21
2723 3269 8.626176 TGGCATTTTACCAAACACCTCATGTG 62.626 42.308 0.00 0.00 41.87 3.21
2732 3278 2.343484 CACCTCATGTGCATCATCCT 57.657 50.000 0.00 0.00 38.34 3.24
2733 3279 3.480505 CACCTCATGTGCATCATCCTA 57.519 47.619 0.00 0.00 38.34 2.94
2734 3280 4.017177 CACCTCATGTGCATCATCCTAT 57.983 45.455 0.00 0.00 38.34 2.57
2735 3281 3.751698 CACCTCATGTGCATCATCCTATG 59.248 47.826 0.00 0.00 38.34 2.23
2743 3289 3.555917 GCATCATCCTATGCTGCTTTC 57.444 47.619 8.13 0.00 45.95 2.62
2744 3290 2.882761 GCATCATCCTATGCTGCTTTCA 59.117 45.455 8.13 0.00 45.95 2.69
2745 3291 3.058155 GCATCATCCTATGCTGCTTTCAG 60.058 47.826 8.13 0.00 45.95 3.02
2753 3299 3.793144 CTGCTTTCAGCCGGCGAC 61.793 66.667 23.20 10.21 41.51 5.19
2756 3302 3.121030 CTTTCAGCCGGCGACCTG 61.121 66.667 23.20 14.47 0.00 4.00
2777 3323 2.504026 CTCGTCGCGTGCAGCTTA 60.504 61.111 5.77 0.00 45.59 3.09
2778 3324 2.778997 CTCGTCGCGTGCAGCTTAC 61.779 63.158 5.77 0.00 45.59 2.34
2779 3325 3.103289 CGTCGCGTGCAGCTTACA 61.103 61.111 5.77 0.00 45.59 2.41
2780 3326 2.470286 GTCGCGTGCAGCTTACAC 59.530 61.111 5.77 6.57 45.59 2.90
2781 3327 2.736995 TCGCGTGCAGCTTACACC 60.737 61.111 5.77 3.89 45.59 4.16
2782 3328 3.041351 CGCGTGCAGCTTACACCA 61.041 61.111 10.33 0.00 45.59 4.17
2783 3329 2.556287 GCGTGCAGCTTACACCAC 59.444 61.111 10.33 1.02 44.04 4.16
2784 3330 2.250939 GCGTGCAGCTTACACCACA 61.251 57.895 10.33 0.00 44.04 4.17
2785 3331 1.862123 CGTGCAGCTTACACCACAG 59.138 57.895 10.33 0.00 34.45 3.66
2786 3332 1.568612 CGTGCAGCTTACACCACAGG 61.569 60.000 10.33 0.00 34.45 4.00
2787 3333 1.073025 TGCAGCTTACACCACAGGG 59.927 57.895 0.00 0.00 41.29 4.45
2788 3334 1.675641 GCAGCTTACACCACAGGGG 60.676 63.158 0.00 0.00 44.81 4.79
2789 3335 1.675641 CAGCTTACACCACAGGGGC 60.676 63.158 0.00 0.00 42.05 5.80
2790 3336 2.361230 GCTTACACCACAGGGGCC 60.361 66.667 0.00 0.00 42.05 5.80
2791 3337 3.166434 CTTACACCACAGGGGCCA 58.834 61.111 4.39 0.00 42.05 5.36
2792 3338 1.303317 CTTACACCACAGGGGCCAC 60.303 63.158 4.39 0.00 42.05 5.01
2793 3339 3.185299 TTACACCACAGGGGCCACG 62.185 63.158 4.39 0.00 42.05 4.94
2798 3344 4.473520 CACAGGGGCCACGGCTAG 62.474 72.222 4.50 0.00 41.60 3.42
2800 3346 4.162690 CAGGGGCCACGGCTAGTC 62.163 72.222 4.39 0.00 41.60 2.59
2807 3353 4.135153 CACGGCTAGTCGGCAGCT 62.135 66.667 22.46 0.00 39.09 4.24
2808 3354 3.382832 ACGGCTAGTCGGCAGCTT 61.383 61.111 22.46 0.00 39.09 3.74
2809 3355 2.050350 ACGGCTAGTCGGCAGCTTA 61.050 57.895 22.46 0.00 39.09 3.09
2810 3356 1.589196 CGGCTAGTCGGCAGCTTAC 60.589 63.158 9.38 0.00 39.09 2.34
2811 3357 1.515954 GGCTAGTCGGCAGCTTACA 59.484 57.895 10.48 0.00 39.09 2.41
2812 3358 0.806492 GGCTAGTCGGCAGCTTACAC 60.806 60.000 10.48 0.00 39.09 2.90
2813 3359 0.806492 GCTAGTCGGCAGCTTACACC 60.806 60.000 4.51 0.00 36.07 4.16
2814 3360 0.530744 CTAGTCGGCAGCTTACACCA 59.469 55.000 0.00 0.00 0.00 4.17
2815 3361 0.245539 TAGTCGGCAGCTTACACCAC 59.754 55.000 0.00 0.00 0.00 4.16
2816 3362 2.048597 TCGGCAGCTTACACCACG 60.049 61.111 0.00 0.00 0.00 4.94
2817 3363 2.357034 CGGCAGCTTACACCACGT 60.357 61.111 0.00 0.00 0.00 4.49
2818 3364 2.380410 CGGCAGCTTACACCACGTC 61.380 63.158 0.00 0.00 0.00 4.34
2819 3365 2.033194 GGCAGCTTACACCACGTCC 61.033 63.158 0.00 0.00 0.00 4.79
2820 3366 1.004918 GCAGCTTACACCACGTCCT 60.005 57.895 0.00 0.00 0.00 3.85
2821 3367 1.291877 GCAGCTTACACCACGTCCTG 61.292 60.000 0.00 0.00 0.00 3.86
2822 3368 1.004918 AGCTTACACCACGTCCTGC 60.005 57.895 0.00 0.00 0.00 4.85
2823 3369 1.004918 GCTTACACCACGTCCTGCT 60.005 57.895 0.00 0.00 0.00 4.24
2824 3370 1.291877 GCTTACACCACGTCCTGCTG 61.292 60.000 0.00 0.00 0.00 4.41
2825 3371 0.033504 CTTACACCACGTCCTGCTGT 59.966 55.000 0.00 0.00 0.00 4.40
2826 3372 0.032952 TTACACCACGTCCTGCTGTC 59.967 55.000 0.00 0.00 0.00 3.51
2827 3373 2.137425 TACACCACGTCCTGCTGTCG 62.137 60.000 0.00 4.48 0.00 4.35
2828 3374 3.224324 ACCACGTCCTGCTGTCGT 61.224 61.111 5.54 5.54 38.34 4.34
2830 3376 3.406361 CACGTCCTGCTGTCGTGC 61.406 66.667 19.00 0.00 45.66 5.34
2831 3377 3.606662 ACGTCCTGCTGTCGTGCT 61.607 61.111 9.41 0.00 36.46 4.40
2832 3378 2.265904 ACGTCCTGCTGTCGTGCTA 61.266 57.895 9.41 0.00 36.46 3.49
2833 3379 1.801913 CGTCCTGCTGTCGTGCTAC 60.802 63.158 0.00 0.00 0.00 3.58
2834 3380 1.801913 GTCCTGCTGTCGTGCTACG 60.802 63.158 2.79 2.79 44.19 3.51
2835 3381 2.507102 CCTGCTGTCGTGCTACGG 60.507 66.667 8.46 0.00 42.81 4.02
2842 3388 2.436469 TCGTGCTACGGCGACCTA 60.436 61.111 16.62 0.00 42.81 3.08
2843 3389 2.277756 CGTGCTACGGCGACCTAC 60.278 66.667 16.62 6.47 42.25 3.18
2844 3390 2.103736 GTGCTACGGCGACCTACC 59.896 66.667 16.62 0.00 42.25 3.18
2891 3437 4.101448 GGCACGGCCCTCTCATGT 62.101 66.667 0.00 0.00 44.06 3.21
2892 3438 2.045926 GCACGGCCCTCTCATGTT 60.046 61.111 0.00 0.00 0.00 2.71
2893 3439 2.401766 GCACGGCCCTCTCATGTTG 61.402 63.158 0.00 0.00 0.00 3.33
2894 3440 2.045926 ACGGCCCTCTCATGTTGC 60.046 61.111 0.00 0.00 0.00 4.17
2895 3441 2.270205 CGGCCCTCTCATGTTGCT 59.730 61.111 0.00 0.00 0.00 3.91
2896 3442 1.377725 CGGCCCTCTCATGTTGCTT 60.378 57.895 0.00 0.00 0.00 3.91
2897 3443 1.372087 CGGCCCTCTCATGTTGCTTC 61.372 60.000 0.00 0.00 0.00 3.86
2898 3444 1.372087 GGCCCTCTCATGTTGCTTCG 61.372 60.000 0.00 0.00 0.00 3.79
2899 3445 1.986575 GCCCTCTCATGTTGCTTCGC 61.987 60.000 0.00 0.00 0.00 4.70
2900 3446 0.392193 CCCTCTCATGTTGCTTCGCT 60.392 55.000 0.00 0.00 0.00 4.93
2901 3447 1.446907 CCTCTCATGTTGCTTCGCTT 58.553 50.000 0.00 0.00 0.00 4.68
2902 3448 1.396301 CCTCTCATGTTGCTTCGCTTC 59.604 52.381 0.00 0.00 0.00 3.86
2903 3449 1.060266 CTCTCATGTTGCTTCGCTTCG 59.940 52.381 0.00 0.00 0.00 3.79
2904 3450 0.095935 CTCATGTTGCTTCGCTTCGG 59.904 55.000 0.00 0.00 0.00 4.30
2905 3451 1.512734 CATGTTGCTTCGCTTCGGC 60.513 57.895 0.00 0.00 37.65 5.54
2925 3471 4.722700 GGTGCCCACGCTGGTCAT 62.723 66.667 3.82 0.00 35.17 3.06
2926 3472 3.434319 GTGCCCACGCTGGTCATG 61.434 66.667 3.82 0.00 35.17 3.07
2927 3473 3.952508 TGCCCACGCTGGTCATGT 61.953 61.111 0.00 0.00 35.17 3.21
2928 3474 3.127533 GCCCACGCTGGTCATGTC 61.128 66.667 0.00 0.00 35.17 3.06
2929 3475 2.436646 CCCACGCTGGTCATGTCC 60.437 66.667 1.55 1.55 35.17 4.02
2930 3476 2.665000 CCACGCTGGTCATGTCCT 59.335 61.111 10.43 0.00 31.35 3.85
2931 3477 1.448540 CCACGCTGGTCATGTCCTC 60.449 63.158 10.43 1.81 31.35 3.71
2932 3478 1.448540 CACGCTGGTCATGTCCTCC 60.449 63.158 10.43 0.72 0.00 4.30
2933 3479 2.202797 CGCTGGTCATGTCCTCCG 60.203 66.667 10.43 8.61 0.00 4.63
2934 3480 2.512515 GCTGGTCATGTCCTCCGC 60.513 66.667 10.43 6.63 0.00 5.54
2935 3481 2.187946 CTGGTCATGTCCTCCGCC 59.812 66.667 10.43 0.00 0.00 6.13
2936 3482 3.723235 CTGGTCATGTCCTCCGCCG 62.723 68.421 10.43 0.00 0.00 6.46
2937 3483 3.458163 GGTCATGTCCTCCGCCGA 61.458 66.667 1.28 0.00 0.00 5.54
2938 3484 2.105128 GTCATGTCCTCCGCCGAG 59.895 66.667 0.00 0.00 35.72 4.63
2958 3504 2.610859 GGCCAGGGAGGTCCTCAA 60.611 66.667 20.72 0.00 46.12 3.02
2959 3505 2.674220 GGCCAGGGAGGTCCTCAAG 61.674 68.421 20.72 9.06 46.12 3.02
2960 3506 1.613630 GCCAGGGAGGTCCTCAAGA 60.614 63.158 20.72 0.00 46.12 3.02
2961 3507 1.904990 GCCAGGGAGGTCCTCAAGAC 61.905 65.000 20.72 7.51 46.12 3.01
2962 3508 1.608717 CCAGGGAGGTCCTCAAGACG 61.609 65.000 20.72 3.94 46.12 4.18
2963 3509 2.232298 CAGGGAGGTCCTCAAGACGC 62.232 65.000 20.72 2.42 46.12 5.19
2968 3514 3.843985 GTCCTCAAGACGCACGAC 58.156 61.111 0.00 0.00 35.30 4.34
3036 3582 4.082523 CGGTGGGCACGACATCCT 62.083 66.667 0.00 0.00 39.40 3.24
3037 3583 2.125106 GGTGGGCACGACATCCTC 60.125 66.667 0.00 0.00 39.40 3.71
3038 3584 2.660064 GGTGGGCACGACATCCTCT 61.660 63.158 0.00 0.00 39.40 3.69
3039 3585 1.296715 GTGGGCACGACATCCTCTT 59.703 57.895 0.00 0.00 36.92 2.85
3040 3586 0.741221 GTGGGCACGACATCCTCTTC 60.741 60.000 0.00 0.00 36.92 2.87
3041 3587 1.153349 GGGCACGACATCCTCTTCC 60.153 63.158 0.00 0.00 0.00 3.46
3042 3588 1.153349 GGCACGACATCCTCTTCCC 60.153 63.158 0.00 0.00 0.00 3.97
3043 3589 1.153349 GCACGACATCCTCTTCCCC 60.153 63.158 0.00 0.00 0.00 4.81
3044 3590 1.522569 CACGACATCCTCTTCCCCC 59.477 63.158 0.00 0.00 0.00 5.40
3058 3604 2.362120 CCCCCTACGACGACCTGT 60.362 66.667 0.00 0.00 0.00 4.00
3059 3605 2.707849 CCCCCTACGACGACCTGTG 61.708 68.421 0.00 0.00 0.00 3.66
3060 3606 2.707849 CCCCTACGACGACCTGTGG 61.708 68.421 0.00 0.00 0.00 4.17
3061 3607 2.181021 CCTACGACGACCTGTGGC 59.819 66.667 0.00 0.00 0.00 5.01
3062 3608 2.202440 CTACGACGACCTGTGGCG 60.202 66.667 0.00 0.00 0.00 5.69
3063 3609 4.409218 TACGACGACCTGTGGCGC 62.409 66.667 0.00 0.00 0.00 6.53
3090 3636 4.778415 CGGGTGTGCGTCCTCGAG 62.778 72.222 5.13 5.13 39.71 4.04
3092 3638 4.057428 GGTGTGCGTCCTCGAGCT 62.057 66.667 6.99 0.00 39.71 4.09
3093 3639 2.505118 GTGTGCGTCCTCGAGCTC 60.505 66.667 6.99 2.73 39.71 4.09
3094 3640 2.673341 TGTGCGTCCTCGAGCTCT 60.673 61.111 12.85 0.00 39.71 4.09
3095 3641 2.268802 TGTGCGTCCTCGAGCTCTT 61.269 57.895 12.85 0.00 39.71 2.85
3096 3642 1.515304 GTGCGTCCTCGAGCTCTTC 60.515 63.158 12.85 0.00 39.71 2.87
3097 3643 1.971695 TGCGTCCTCGAGCTCTTCA 60.972 57.895 12.85 0.00 39.71 3.02
3098 3644 1.226547 GCGTCCTCGAGCTCTTCAG 60.227 63.158 12.85 4.75 39.71 3.02
3119 3665 4.681978 GTGCCGCGTCCAGTCCTT 62.682 66.667 4.92 0.00 0.00 3.36
3120 3666 4.373116 TGCCGCGTCCAGTCCTTC 62.373 66.667 4.92 0.00 0.00 3.46
3122 3668 4.796231 CCGCGTCCAGTCCTTCCG 62.796 72.222 4.92 0.00 0.00 4.30
3125 3671 3.691342 CGTCCAGTCCTTCCGCCA 61.691 66.667 0.00 0.00 0.00 5.69
3126 3672 2.047179 GTCCAGTCCTTCCGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
3127 3673 2.525629 TCCAGTCCTTCCGCCACA 60.526 61.111 0.00 0.00 0.00 4.17
3128 3674 1.918293 TCCAGTCCTTCCGCCACAT 60.918 57.895 0.00 0.00 0.00 3.21
3129 3675 1.450312 CCAGTCCTTCCGCCACATC 60.450 63.158 0.00 0.00 0.00 3.06
3130 3676 1.450312 CAGTCCTTCCGCCACATCC 60.450 63.158 0.00 0.00 0.00 3.51
3131 3677 2.511600 GTCCTTCCGCCACATCCG 60.512 66.667 0.00 0.00 0.00 4.18
3132 3678 4.467084 TCCTTCCGCCACATCCGC 62.467 66.667 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 7.061094 GCTCAGATTAACGTTTTCAAGGAATTG 59.939 37.037 5.91 0.83 0.00 2.32
186 311 3.181483 GGTGAATTCATGATGGAACTGGC 60.181 47.826 12.12 0.00 0.00 4.85
187 312 3.065786 CGGTGAATTCATGATGGAACTGG 59.934 47.826 12.12 0.00 0.00 4.00
220 363 1.003839 TGAGGGTTGATGGACACGC 60.004 57.895 0.00 0.00 0.00 5.34
309 452 2.158755 GCCTACTGCATGGGTTGAGTAT 60.159 50.000 0.00 0.00 40.77 2.12
357 500 2.186076 GGCTCTGTTCGTGATCTTACG 58.814 52.381 0.00 0.00 44.98 3.18
390 537 1.325943 GAATTGCGTAGAGTGCTCTGC 59.674 52.381 11.63 9.31 40.71 4.26
419 566 2.750712 CGGACGGATTGGTTTATTTGGT 59.249 45.455 0.00 0.00 0.00 3.67
552 699 1.300080 GCGCTTTGGCTTTGCTTGA 60.300 52.632 0.00 0.00 36.09 3.02
847 995 1.194997 CTCGTAGGTGGTCGATCGATC 59.805 57.143 22.50 21.98 35.57 3.69
1275 1674 0.250597 TCTCCAGGAACTCGTCGTCA 60.251 55.000 0.00 0.00 34.60 4.35
1376 1811 2.266055 GGAACTGGCCACTCCTCG 59.734 66.667 18.44 4.04 35.26 4.63
1382 1817 1.453155 CATGTACTGGAACTGGCCAC 58.547 55.000 0.00 0.00 33.52 5.01
1509 2007 5.294552 ACATTTAGTCCTAATTTGCGAGCTC 59.705 40.000 2.73 2.73 0.00 4.09
1523 2021 5.486706 CGCATACGTGTAAACATTTAGTCC 58.513 41.667 0.00 0.00 33.53 3.85
1594 2120 1.566231 CCAATCTTTACCAGCCCCTCT 59.434 52.381 0.00 0.00 0.00 3.69
2202 2748 5.213675 GGTACTGTAGCTAGCTGATAAACG 58.786 45.833 27.68 14.26 0.00 3.60
2239 2785 9.030452 GCCCTATGTATATATAGATTGAGGGAG 57.970 40.741 27.34 12.16 35.46 4.30
2240 2786 7.956315 GGCCCTATGTATATATAGATTGAGGGA 59.044 40.741 27.34 5.28 35.46 4.20
2241 2787 7.958583 AGGCCCTATGTATATATAGATTGAGGG 59.041 40.741 22.63 22.63 36.06 4.30
2242 2788 8.964533 AGGCCCTATGTATATATAGATTGAGG 57.035 38.462 15.92 9.03 33.42 3.86
2275 2821 9.932207 ATCAATACTCAAATGCAATCTCAAAAA 57.068 25.926 0.00 0.00 0.00 1.94
2279 2825 9.617523 TCTTATCAATACTCAAATGCAATCTCA 57.382 29.630 0.00 0.00 0.00 3.27
2348 2894 0.524862 TCGTACGTGAAAGGAGCTCC 59.475 55.000 26.22 26.22 0.00 4.70
2349 2895 2.342910 TTCGTACGTGAAAGGAGCTC 57.657 50.000 16.05 4.71 0.00 4.09
2350 2896 3.314541 AATTCGTACGTGAAAGGAGCT 57.685 42.857 16.05 0.00 0.00 4.09
2351 2897 3.430895 TCAAATTCGTACGTGAAAGGAGC 59.569 43.478 16.05 0.00 0.00 4.70
2352 2898 4.432503 CGTCAAATTCGTACGTGAAAGGAG 60.433 45.833 16.05 0.00 32.16 3.69
2353 2899 3.426191 CGTCAAATTCGTACGTGAAAGGA 59.574 43.478 16.05 4.81 32.16 3.36
2354 2900 3.422603 CCGTCAAATTCGTACGTGAAAGG 60.423 47.826 16.05 13.44 34.90 3.11
2355 2901 3.182972 ACCGTCAAATTCGTACGTGAAAG 59.817 43.478 16.05 8.52 34.90 2.62
2356 2902 3.122297 ACCGTCAAATTCGTACGTGAAA 58.878 40.909 16.05 2.41 34.90 2.69
2357 2903 2.741612 ACCGTCAAATTCGTACGTGAA 58.258 42.857 16.05 3.23 34.90 3.18
2358 2904 2.420628 ACCGTCAAATTCGTACGTGA 57.579 45.000 16.05 8.71 34.90 4.35
2359 2905 3.540744 GCATACCGTCAAATTCGTACGTG 60.541 47.826 16.05 6.20 34.90 4.49
2360 2906 2.599973 GCATACCGTCAAATTCGTACGT 59.400 45.455 16.05 0.00 34.90 3.57
2361 2907 2.855963 AGCATACCGTCAAATTCGTACG 59.144 45.455 9.53 9.53 36.42 3.67
2362 2908 4.852609 AAGCATACCGTCAAATTCGTAC 57.147 40.909 0.00 0.00 0.00 3.67
2363 2909 4.691685 ACAAAGCATACCGTCAAATTCGTA 59.308 37.500 0.00 0.00 0.00 3.43
2364 2910 3.500680 ACAAAGCATACCGTCAAATTCGT 59.499 39.130 0.00 0.00 0.00 3.85
2365 2911 3.845775 CACAAAGCATACCGTCAAATTCG 59.154 43.478 0.00 0.00 0.00 3.34
2366 2912 4.794169 ACACAAAGCATACCGTCAAATTC 58.206 39.130 0.00 0.00 0.00 2.17
2367 2913 4.846779 ACACAAAGCATACCGTCAAATT 57.153 36.364 0.00 0.00 0.00 1.82
2368 2914 5.472137 AGTTACACAAAGCATACCGTCAAAT 59.528 36.000 0.00 0.00 0.00 2.32
2369 2915 4.817464 AGTTACACAAAGCATACCGTCAAA 59.183 37.500 0.00 0.00 0.00 2.69
2370 2916 4.382291 AGTTACACAAAGCATACCGTCAA 58.618 39.130 0.00 0.00 0.00 3.18
2371 2917 3.997762 AGTTACACAAAGCATACCGTCA 58.002 40.909 0.00 0.00 0.00 4.35
2372 2918 4.708601 CAAGTTACACAAAGCATACCGTC 58.291 43.478 0.00 0.00 0.00 4.79
2373 2919 3.058501 GCAAGTTACACAAAGCATACCGT 60.059 43.478 0.00 0.00 0.00 4.83
2374 2920 3.058570 TGCAAGTTACACAAAGCATACCG 60.059 43.478 0.00 0.00 0.00 4.02
2375 2921 4.497473 TGCAAGTTACACAAAGCATACC 57.503 40.909 0.00 0.00 0.00 2.73
2376 2922 5.460646 ACATGCAAGTTACACAAAGCATAC 58.539 37.500 0.00 0.00 40.38 2.39
2377 2923 5.240403 TGACATGCAAGTTACACAAAGCATA 59.760 36.000 0.00 0.00 40.38 3.14
2378 2924 4.037803 TGACATGCAAGTTACACAAAGCAT 59.962 37.500 0.00 0.00 42.82 3.79
2379 2925 3.379688 TGACATGCAAGTTACACAAAGCA 59.620 39.130 0.00 0.00 36.34 3.91
2380 2926 3.963665 TGACATGCAAGTTACACAAAGC 58.036 40.909 0.00 0.00 0.00 3.51
2423 2969 4.282449 GCAACCCCTAATGTGGTAGTTTTT 59.718 41.667 0.00 0.00 33.52 1.94
2424 2970 3.830178 GCAACCCCTAATGTGGTAGTTTT 59.170 43.478 0.00 0.00 33.52 2.43
2425 2971 3.427573 GCAACCCCTAATGTGGTAGTTT 58.572 45.455 0.00 0.00 33.52 2.66
2426 2972 2.291346 GGCAACCCCTAATGTGGTAGTT 60.291 50.000 0.00 0.00 33.52 2.24
2427 2973 1.283905 GGCAACCCCTAATGTGGTAGT 59.716 52.381 0.00 0.00 33.52 2.73
2428 2974 1.745827 CGGCAACCCCTAATGTGGTAG 60.746 57.143 0.00 0.00 33.52 3.18
2429 2975 0.253610 CGGCAACCCCTAATGTGGTA 59.746 55.000 0.00 0.00 33.52 3.25
2430 2976 1.001393 CGGCAACCCCTAATGTGGT 60.001 57.895 0.00 0.00 36.06 4.16
2431 2977 1.001393 ACGGCAACCCCTAATGTGG 60.001 57.895 0.00 0.00 0.00 4.17
2432 2978 1.029947 GGACGGCAACCCCTAATGTG 61.030 60.000 0.00 0.00 0.00 3.21
2433 2979 1.301954 GGACGGCAACCCCTAATGT 59.698 57.895 0.00 0.00 0.00 2.71
2434 2980 1.453197 GGGACGGCAACCCCTAATG 60.453 63.158 4.85 0.00 41.38 1.90
2435 2981 1.926489 TGGGACGGCAACCCCTAAT 60.926 57.895 12.44 0.00 46.21 1.73
2436 2982 2.529643 TGGGACGGCAACCCCTAA 60.530 61.111 12.44 0.00 46.21 2.69
2437 2983 3.324108 GTGGGACGGCAACCCCTA 61.324 66.667 12.44 0.00 46.21 3.53
2440 2986 3.485346 TTCTGTGGGACGGCAACCC 62.485 63.158 8.77 8.77 46.87 4.11
2441 2987 2.112297 TTCTGTGGGACGGCAACC 59.888 61.111 0.00 0.00 0.00 3.77
2442 2988 0.034337 TAGTTCTGTGGGACGGCAAC 59.966 55.000 0.00 0.00 0.00 4.17
2443 2989 0.981183 ATAGTTCTGTGGGACGGCAA 59.019 50.000 0.00 0.00 0.00 4.52
2444 2990 0.535335 GATAGTTCTGTGGGACGGCA 59.465 55.000 0.00 0.00 0.00 5.69
2445 2991 0.535335 TGATAGTTCTGTGGGACGGC 59.465 55.000 0.00 0.00 0.00 5.68
2446 2992 1.548719 TGTGATAGTTCTGTGGGACGG 59.451 52.381 0.00 0.00 0.00 4.79
2447 2993 3.526931 ATGTGATAGTTCTGTGGGACG 57.473 47.619 0.00 0.00 0.00 4.79
2448 2994 4.832248 TGAATGTGATAGTTCTGTGGGAC 58.168 43.478 0.00 0.00 0.00 4.46
2449 2995 5.497464 TTGAATGTGATAGTTCTGTGGGA 57.503 39.130 0.00 0.00 0.00 4.37
2450 2996 6.573664 TTTTGAATGTGATAGTTCTGTGGG 57.426 37.500 0.00 0.00 0.00 4.61
2475 3021 9.574516 AGAAATTTTTGGTAGTTATCAGTCACT 57.425 29.630 0.00 0.00 0.00 3.41
2504 3050 9.303537 CGAAAGTGGTAATTTTTAGTTCCAAAA 57.696 29.630 0.00 0.00 0.00 2.44
2505 3051 8.684520 TCGAAAGTGGTAATTTTTAGTTCCAAA 58.315 29.630 0.00 0.00 0.00 3.28
2506 3052 8.223177 TCGAAAGTGGTAATTTTTAGTTCCAA 57.777 30.769 0.00 0.00 0.00 3.53
2507 3053 7.804843 TCGAAAGTGGTAATTTTTAGTTCCA 57.195 32.000 0.00 0.00 0.00 3.53
2508 3054 9.518906 TTTTCGAAAGTGGTAATTTTTAGTTCC 57.481 29.630 10.98 0.00 0.00 3.62
2515 3061 8.911662 CGATCATTTTTCGAAAGTGGTAATTTT 58.088 29.630 19.08 5.11 38.88 1.82
2516 3062 7.540745 CCGATCATTTTTCGAAAGTGGTAATTT 59.459 33.333 19.08 5.37 38.88 1.82
2517 3063 7.027161 CCGATCATTTTTCGAAAGTGGTAATT 58.973 34.615 19.08 2.28 38.88 1.40
2518 3064 6.150474 ACCGATCATTTTTCGAAAGTGGTAAT 59.850 34.615 19.08 10.79 38.88 1.89
2519 3065 5.470777 ACCGATCATTTTTCGAAAGTGGTAA 59.529 36.000 19.08 9.22 38.88 2.85
2520 3066 4.998672 ACCGATCATTTTTCGAAAGTGGTA 59.001 37.500 19.08 7.13 38.88 3.25
2521 3067 3.818773 ACCGATCATTTTTCGAAAGTGGT 59.181 39.130 19.08 14.90 38.88 4.16
2522 3068 4.419522 ACCGATCATTTTTCGAAAGTGG 57.580 40.909 19.08 13.13 38.88 4.00
2523 3069 7.268447 GTCTAAACCGATCATTTTTCGAAAGTG 59.732 37.037 10.98 13.61 38.88 3.16
2524 3070 7.295930 GTCTAAACCGATCATTTTTCGAAAGT 58.704 34.615 10.98 1.38 38.88 2.66
2525 3071 6.461698 CGTCTAAACCGATCATTTTTCGAAAG 59.538 38.462 10.98 0.00 38.88 2.62
2526 3072 6.145858 TCGTCTAAACCGATCATTTTTCGAAA 59.854 34.615 6.47 6.47 38.88 3.46
2527 3073 5.634439 TCGTCTAAACCGATCATTTTTCGAA 59.366 36.000 0.00 0.00 38.88 3.71
2528 3074 5.162794 TCGTCTAAACCGATCATTTTTCGA 58.837 37.500 0.00 2.38 38.88 3.71
2529 3075 5.444586 TCGTCTAAACCGATCATTTTTCG 57.555 39.130 0.00 0.00 36.38 3.46
2530 3076 9.763465 TTAAATCGTCTAAACCGATCATTTTTC 57.237 29.630 0.00 0.00 43.75 2.29
2532 3078 9.550811 GTTTAAATCGTCTAAACCGATCATTTT 57.449 29.630 0.00 0.00 43.75 1.82
2533 3079 8.723311 TGTTTAAATCGTCTAAACCGATCATTT 58.277 29.630 11.49 0.00 43.75 2.32
2534 3080 8.173130 GTGTTTAAATCGTCTAAACCGATCATT 58.827 33.333 11.49 0.00 43.75 2.57
2535 3081 7.463648 CGTGTTTAAATCGTCTAAACCGATCAT 60.464 37.037 11.49 0.00 43.75 2.45
2536 3082 6.183360 CGTGTTTAAATCGTCTAAACCGATCA 60.183 38.462 11.49 0.00 43.75 2.92
2537 3083 6.173724 CGTGTTTAAATCGTCTAAACCGATC 58.826 40.000 11.49 0.00 43.75 3.69
2538 3084 5.634859 ACGTGTTTAAATCGTCTAAACCGAT 59.365 36.000 19.98 0.00 46.29 4.18
2539 3085 4.981674 ACGTGTTTAAATCGTCTAAACCGA 59.018 37.500 19.98 0.00 38.11 4.69
2540 3086 5.254669 ACGTGTTTAAATCGTCTAAACCG 57.745 39.130 13.05 16.06 38.11 4.44
2541 3087 9.043678 CATAAACGTGTTTAAATCGTCTAAACC 57.956 33.333 17.12 5.51 38.11 3.27
2542 3088 9.796062 TCATAAACGTGTTTAAATCGTCTAAAC 57.204 29.630 17.12 8.74 38.38 2.01
2543 3089 9.796062 GTCATAAACGTGTTTAAATCGTCTAAA 57.204 29.630 17.12 7.73 38.38 1.85
2544 3090 8.976471 TGTCATAAACGTGTTTAAATCGTCTAA 58.024 29.630 17.12 9.44 38.38 2.10
2545 3091 8.518151 TGTCATAAACGTGTTTAAATCGTCTA 57.482 30.769 17.12 11.12 38.38 2.59
2546 3092 7.410800 TGTCATAAACGTGTTTAAATCGTCT 57.589 32.000 17.12 9.67 38.38 4.18
2547 3093 7.252865 GCATGTCATAAACGTGTTTAAATCGTC 60.253 37.037 17.12 8.15 45.19 4.20
2548 3094 6.521821 GCATGTCATAAACGTGTTTAAATCGT 59.478 34.615 9.06 13.05 45.19 3.73
2549 3095 6.289821 CGCATGTCATAAACGTGTTTAAATCG 60.290 38.462 9.06 12.04 45.19 3.34
2550 3096 6.021782 CCGCATGTCATAAACGTGTTTAAATC 60.022 38.462 9.06 4.08 45.19 2.17
2551 3097 5.797934 CCGCATGTCATAAACGTGTTTAAAT 59.202 36.000 9.06 0.00 45.19 1.40
2552 3098 5.147865 CCGCATGTCATAAACGTGTTTAAA 58.852 37.500 9.06 0.00 45.19 1.52
2553 3099 4.378563 CCCGCATGTCATAAACGTGTTTAA 60.379 41.667 9.06 0.00 45.19 1.52
2554 3100 3.125487 CCCGCATGTCATAAACGTGTTTA 59.875 43.478 7.58 7.58 45.19 2.01
2555 3101 2.095466 CCCGCATGTCATAAACGTGTTT 60.095 45.455 3.21 3.21 45.19 2.83
2556 3102 1.466950 CCCGCATGTCATAAACGTGTT 59.533 47.619 0.00 0.00 45.19 3.32
2557 3103 1.083489 CCCGCATGTCATAAACGTGT 58.917 50.000 0.00 0.00 45.19 4.49
2558 3104 1.062002 GTCCCGCATGTCATAAACGTG 59.938 52.381 0.00 0.00 46.01 4.49
2559 3105 1.365699 GTCCCGCATGTCATAAACGT 58.634 50.000 0.00 0.00 0.00 3.99
2560 3106 0.655733 GGTCCCGCATGTCATAAACG 59.344 55.000 0.00 0.00 0.00 3.60
2561 3107 1.021968 GGGTCCCGCATGTCATAAAC 58.978 55.000 0.00 0.00 0.00 2.01
2562 3108 0.621082 TGGGTCCCGCATGTCATAAA 59.379 50.000 2.65 0.00 0.00 1.40
2563 3109 0.107410 GTGGGTCCCGCATGTCATAA 60.107 55.000 17.13 0.00 33.65 1.90
2564 3110 1.524961 GTGGGTCCCGCATGTCATA 59.475 57.895 17.13 0.00 33.65 2.15
2565 3111 2.272146 GTGGGTCCCGCATGTCAT 59.728 61.111 17.13 0.00 33.65 3.06
2566 3112 4.028490 GGTGGGTCCCGCATGTCA 62.028 66.667 23.12 0.00 35.42 3.58
2593 3139 4.961511 GACTGTGCCGCCACGTCA 62.962 66.667 13.68 0.00 45.04 4.35
2594 3140 4.961511 TGACTGTGCCGCCACGTC 62.962 66.667 12.31 12.31 45.04 4.34
2595 3141 4.539083 TTGACTGTGCCGCCACGT 62.539 61.111 0.00 0.00 45.04 4.49
2596 3142 4.012895 GTTGACTGTGCCGCCACG 62.013 66.667 0.00 0.00 45.04 4.94
2597 3143 2.591715 AGTTGACTGTGCCGCCAC 60.592 61.111 0.00 0.00 42.40 5.01
2598 3144 2.280797 GAGTTGACTGTGCCGCCA 60.281 61.111 0.00 0.00 0.00 5.69
2599 3145 2.031163 AGAGTTGACTGTGCCGCC 59.969 61.111 0.00 0.00 0.00 6.13
2600 3146 3.248029 CAGAGTTGACTGTGCCGC 58.752 61.111 0.00 0.00 30.35 6.53
2606 3152 6.136071 CGGTCAAAATAAACAGAGTTGACTG 58.864 40.000 12.91 10.86 44.73 3.51
2607 3153 5.277828 GCGGTCAAAATAAACAGAGTTGACT 60.278 40.000 12.91 0.00 44.73 3.41
2608 3154 4.909880 GCGGTCAAAATAAACAGAGTTGAC 59.090 41.667 6.34 6.34 44.66 3.18
2609 3155 4.819630 AGCGGTCAAAATAAACAGAGTTGA 59.180 37.500 0.00 0.00 0.00 3.18
2610 3156 5.108385 AGCGGTCAAAATAAACAGAGTTG 57.892 39.130 0.00 0.00 0.00 3.16
2611 3157 6.485648 ACTTAGCGGTCAAAATAAACAGAGTT 59.514 34.615 0.00 0.00 0.00 3.01
2612 3158 5.995897 ACTTAGCGGTCAAAATAAACAGAGT 59.004 36.000 0.00 0.00 0.00 3.24
2613 3159 6.481954 ACTTAGCGGTCAAAATAAACAGAG 57.518 37.500 0.00 0.00 0.00 3.35
2614 3160 6.483974 TCAACTTAGCGGTCAAAATAAACAGA 59.516 34.615 0.00 0.00 0.00 3.41
2615 3161 6.577427 GTCAACTTAGCGGTCAAAATAAACAG 59.423 38.462 0.00 0.00 0.00 3.16
2616 3162 6.432107 GTCAACTTAGCGGTCAAAATAAACA 58.568 36.000 0.00 0.00 0.00 2.83
2617 3163 5.854866 GGTCAACTTAGCGGTCAAAATAAAC 59.145 40.000 0.00 0.00 0.00 2.01
2618 3164 5.334260 CGGTCAACTTAGCGGTCAAAATAAA 60.334 40.000 0.00 0.00 36.75 1.40
2619 3165 4.152759 CGGTCAACTTAGCGGTCAAAATAA 59.847 41.667 0.00 0.00 36.75 1.40
2620 3166 3.680937 CGGTCAACTTAGCGGTCAAAATA 59.319 43.478 0.00 0.00 36.75 1.40
2621 3167 2.482721 CGGTCAACTTAGCGGTCAAAAT 59.517 45.455 0.00 0.00 36.75 1.82
2622 3168 1.868498 CGGTCAACTTAGCGGTCAAAA 59.132 47.619 0.00 0.00 36.75 2.44
2623 3169 1.202557 ACGGTCAACTTAGCGGTCAAA 60.203 47.619 0.00 0.00 44.31 2.69
2624 3170 0.390124 ACGGTCAACTTAGCGGTCAA 59.610 50.000 0.00 0.00 44.31 3.18
2625 3171 0.390124 AACGGTCAACTTAGCGGTCA 59.610 50.000 0.00 0.00 44.31 4.02
2626 3172 2.352503 TAACGGTCAACTTAGCGGTC 57.647 50.000 0.00 0.00 44.31 4.79
2627 3173 2.613691 CATAACGGTCAACTTAGCGGT 58.386 47.619 0.00 0.00 44.31 5.68
2628 3174 1.326548 GCATAACGGTCAACTTAGCGG 59.673 52.381 0.00 0.00 44.31 5.52
2629 3175 1.326548 GGCATAACGGTCAACTTAGCG 59.673 52.381 0.00 0.00 45.44 4.26
2630 3176 2.351726 CTGGCATAACGGTCAACTTAGC 59.648 50.000 0.00 0.00 0.00 3.09
2631 3177 2.936498 CCTGGCATAACGGTCAACTTAG 59.064 50.000 0.00 0.00 0.00 2.18
2632 3178 2.303600 ACCTGGCATAACGGTCAACTTA 59.696 45.455 0.00 0.00 0.00 2.24
2633 3179 1.073284 ACCTGGCATAACGGTCAACTT 59.927 47.619 0.00 0.00 0.00 2.66
2634 3180 0.690762 ACCTGGCATAACGGTCAACT 59.309 50.000 0.00 0.00 0.00 3.16
2635 3181 0.802494 CACCTGGCATAACGGTCAAC 59.198 55.000 0.00 0.00 0.00 3.18
2636 3182 0.322098 CCACCTGGCATAACGGTCAA 60.322 55.000 0.00 0.00 0.00 3.18
2637 3183 1.298340 CCACCTGGCATAACGGTCA 59.702 57.895 0.00 0.00 0.00 4.02
2638 3184 1.451387 CCCACCTGGCATAACGGTC 60.451 63.158 0.00 0.00 0.00 4.79
2639 3185 2.674754 CCCACCTGGCATAACGGT 59.325 61.111 0.00 0.00 0.00 4.83
2640 3186 2.124320 CCCCACCTGGCATAACGG 60.124 66.667 0.00 0.00 0.00 4.44
2655 3201 3.819877 AAGAACGACGTGTGGGCCC 62.820 63.158 17.59 17.59 0.00 5.80
2656 3202 2.280592 AAGAACGACGTGTGGGCC 60.281 61.111 0.00 0.00 0.00 5.80
2657 3203 0.878961 AAGAAGAACGACGTGTGGGC 60.879 55.000 0.00 0.00 0.00 5.36
2658 3204 1.137513 GAAGAAGAACGACGTGTGGG 58.862 55.000 0.00 0.00 0.00 4.61
2659 3205 1.137513 GGAAGAAGAACGACGTGTGG 58.862 55.000 0.00 0.00 0.00 4.17
2660 3206 2.052157 GAGGAAGAAGAACGACGTGTG 58.948 52.381 0.00 0.00 0.00 3.82
2661 3207 1.000496 GGAGGAAGAAGAACGACGTGT 60.000 52.381 0.00 0.00 0.00 4.49
2662 3208 1.269998 AGGAGGAAGAAGAACGACGTG 59.730 52.381 0.00 0.00 0.00 4.49
2663 3209 1.540707 GAGGAGGAAGAAGAACGACGT 59.459 52.381 0.00 0.00 0.00 4.34
2664 3210 1.813786 AGAGGAGGAAGAAGAACGACG 59.186 52.381 0.00 0.00 0.00 5.12
2665 3211 3.086282 AGAGAGGAGGAAGAAGAACGAC 58.914 50.000 0.00 0.00 0.00 4.34
2666 3212 3.085533 CAGAGAGGAGGAAGAAGAACGA 58.914 50.000 0.00 0.00 0.00 3.85
2667 3213 2.823154 ACAGAGAGGAGGAAGAAGAACG 59.177 50.000 0.00 0.00 0.00 3.95
2668 3214 5.891551 AGATACAGAGAGGAGGAAGAAGAAC 59.108 44.000 0.00 0.00 0.00 3.01
2669 3215 6.086011 AGATACAGAGAGGAGGAAGAAGAA 57.914 41.667 0.00 0.00 0.00 2.52
2670 3216 5.725551 AGATACAGAGAGGAGGAAGAAGA 57.274 43.478 0.00 0.00 0.00 2.87
2671 3217 6.607198 AGAAAGATACAGAGAGGAGGAAGAAG 59.393 42.308 0.00 0.00 0.00 2.85
2672 3218 6.498538 AGAAAGATACAGAGAGGAGGAAGAA 58.501 40.000 0.00 0.00 0.00 2.52
2673 3219 6.086011 AGAAAGATACAGAGAGGAGGAAGA 57.914 41.667 0.00 0.00 0.00 2.87
2674 3220 6.790232 AAGAAAGATACAGAGAGGAGGAAG 57.210 41.667 0.00 0.00 0.00 3.46
2675 3221 6.070538 CCAAAGAAAGATACAGAGAGGAGGAA 60.071 42.308 0.00 0.00 0.00 3.36
2676 3222 5.423610 CCAAAGAAAGATACAGAGAGGAGGA 59.576 44.000 0.00 0.00 0.00 3.71
2677 3223 5.669477 CCAAAGAAAGATACAGAGAGGAGG 58.331 45.833 0.00 0.00 0.00 4.30
2678 3224 5.115480 GCCAAAGAAAGATACAGAGAGGAG 58.885 45.833 0.00 0.00 0.00 3.69
2679 3225 4.532126 TGCCAAAGAAAGATACAGAGAGGA 59.468 41.667 0.00 0.00 0.00 3.71
2680 3226 4.836825 TGCCAAAGAAAGATACAGAGAGG 58.163 43.478 0.00 0.00 0.00 3.69
2681 3227 6.998968 AATGCCAAAGAAAGATACAGAGAG 57.001 37.500 0.00 0.00 0.00 3.20
2682 3228 7.765695 AAAATGCCAAAGAAAGATACAGAGA 57.234 32.000 0.00 0.00 0.00 3.10
2683 3229 7.970614 GGTAAAATGCCAAAGAAAGATACAGAG 59.029 37.037 0.00 0.00 0.00 3.35
2684 3230 7.450014 TGGTAAAATGCCAAAGAAAGATACAGA 59.550 33.333 0.00 0.00 32.29 3.41
2685 3231 7.601856 TGGTAAAATGCCAAAGAAAGATACAG 58.398 34.615 0.00 0.00 32.29 2.74
2686 3232 7.531857 TGGTAAAATGCCAAAGAAAGATACA 57.468 32.000 0.00 0.00 32.29 2.29
2697 3243 3.706594 TGAGGTGTTTGGTAAAATGCCAA 59.293 39.130 0.00 0.00 43.51 4.52
2698 3244 3.300388 TGAGGTGTTTGGTAAAATGCCA 58.700 40.909 0.00 0.00 0.00 4.92
2699 3245 4.244862 CATGAGGTGTTTGGTAAAATGCC 58.755 43.478 0.00 0.00 0.00 4.40
2700 3246 4.685628 CACATGAGGTGTTTGGTAAAATGC 59.314 41.667 0.00 0.00 42.75 3.56
2714 3260 4.017177 CATAGGATGATGCACATGAGGT 57.983 45.455 0.00 0.00 39.56 3.85
2739 3285 3.121030 CAGGTCGCCGGCTGAAAG 61.121 66.667 26.68 8.63 0.00 2.62
2760 3306 2.504026 TAAGCTGCACGCGACGAG 60.504 61.111 15.93 5.83 45.59 4.18
2761 3307 2.803670 GTAAGCTGCACGCGACGA 60.804 61.111 15.93 0.00 45.59 4.20
2762 3308 3.103289 TGTAAGCTGCACGCGACG 61.103 61.111 15.93 4.12 45.59 5.12
2763 3309 2.470286 GTGTAAGCTGCACGCGAC 59.530 61.111 15.93 4.74 45.59 5.19
2764 3310 2.736995 GGTGTAAGCTGCACGCGA 60.737 61.111 15.93 0.00 45.59 5.87
2765 3311 3.041351 TGGTGTAAGCTGCACGCG 61.041 61.111 3.53 3.53 45.59 6.01
2766 3312 2.175184 CTGTGGTGTAAGCTGCACGC 62.175 60.000 13.38 9.06 37.70 5.34
2767 3313 1.568612 CCTGTGGTGTAAGCTGCACG 61.569 60.000 13.38 2.76 37.70 5.34
2768 3314 1.237285 CCCTGTGGTGTAAGCTGCAC 61.237 60.000 11.87 11.87 36.22 4.57
2769 3315 1.073025 CCCTGTGGTGTAAGCTGCA 59.927 57.895 1.02 0.00 33.76 4.41
2770 3316 1.675641 CCCCTGTGGTGTAAGCTGC 60.676 63.158 0.00 0.00 33.76 5.25
2771 3317 1.675641 GCCCCTGTGGTGTAAGCTG 60.676 63.158 0.00 0.00 36.04 4.24
2772 3318 2.757077 GCCCCTGTGGTGTAAGCT 59.243 61.111 0.00 0.00 36.04 3.74
2773 3319 2.361230 GGCCCCTGTGGTGTAAGC 60.361 66.667 0.00 0.00 36.04 3.09
2774 3320 1.303317 GTGGCCCCTGTGGTGTAAG 60.303 63.158 0.00 0.00 36.04 2.34
2775 3321 2.840576 GTGGCCCCTGTGGTGTAA 59.159 61.111 0.00 0.00 36.04 2.41
2776 3322 3.632080 CGTGGCCCCTGTGGTGTA 61.632 66.667 0.00 0.00 36.04 2.90
2781 3327 4.473520 CTAGCCGTGGCCCCTGTG 62.474 72.222 7.39 0.00 43.17 3.66
2783 3329 4.162690 GACTAGCCGTGGCCCCTG 62.163 72.222 7.39 0.00 43.17 4.45
2790 3336 2.279502 TAAGCTGCCGACTAGCCGTG 62.280 60.000 0.00 0.00 42.07 4.94
2791 3337 2.050350 TAAGCTGCCGACTAGCCGT 61.050 57.895 0.00 0.00 42.07 5.68
2792 3338 1.589196 GTAAGCTGCCGACTAGCCG 60.589 63.158 0.00 0.00 42.07 5.52
2793 3339 0.806492 GTGTAAGCTGCCGACTAGCC 60.806 60.000 0.00 0.00 42.07 3.93
2794 3340 0.806492 GGTGTAAGCTGCCGACTAGC 60.806 60.000 0.00 0.00 41.43 3.42
2795 3341 0.530744 TGGTGTAAGCTGCCGACTAG 59.469 55.000 0.00 0.00 33.76 2.57
2796 3342 0.245539 GTGGTGTAAGCTGCCGACTA 59.754 55.000 0.00 0.00 33.76 2.59
2797 3343 1.004918 GTGGTGTAAGCTGCCGACT 60.005 57.895 0.00 0.00 33.76 4.18
2798 3344 2.380410 CGTGGTGTAAGCTGCCGAC 61.380 63.158 0.00 0.00 33.76 4.79
2799 3345 2.048597 CGTGGTGTAAGCTGCCGA 60.049 61.111 0.00 0.00 33.76 5.54
2800 3346 2.357034 ACGTGGTGTAAGCTGCCG 60.357 61.111 0.00 0.00 33.76 5.69
2801 3347 2.033194 GGACGTGGTGTAAGCTGCC 61.033 63.158 0.00 0.00 33.76 4.85
2802 3348 1.004918 AGGACGTGGTGTAAGCTGC 60.005 57.895 0.00 0.00 33.76 5.25
2803 3349 1.291877 GCAGGACGTGGTGTAAGCTG 61.292 60.000 0.00 0.00 33.76 4.24
2804 3350 1.004918 GCAGGACGTGGTGTAAGCT 60.005 57.895 0.00 0.00 33.76 3.74
2805 3351 1.004918 AGCAGGACGTGGTGTAAGC 60.005 57.895 0.00 0.00 34.82 3.09
2811 3357 3.224324 ACGACAGCAGGACGTGGT 61.224 61.111 0.00 0.00 38.79 4.16
2814 3360 2.265904 TAGCACGACAGCAGGACGT 61.266 57.895 0.00 0.00 40.87 4.34
2815 3361 1.801913 GTAGCACGACAGCAGGACG 60.802 63.158 0.00 0.00 36.85 4.79
2816 3362 1.801913 CGTAGCACGACAGCAGGAC 60.802 63.158 3.04 0.00 46.05 3.85
2817 3363 2.566529 CGTAGCACGACAGCAGGA 59.433 61.111 3.04 0.00 46.05 3.86
2818 3364 2.507102 CCGTAGCACGACAGCAGG 60.507 66.667 9.75 0.00 46.05 4.85
2819 3365 3.181967 GCCGTAGCACGACAGCAG 61.182 66.667 9.75 0.00 46.05 4.24
2821 3367 4.771356 TCGCCGTAGCACGACAGC 62.771 66.667 9.75 4.83 46.05 4.40
2825 3371 2.436469 TAGGTCGCCGTAGCACGA 60.436 61.111 9.75 0.00 46.05 4.35
2826 3372 2.277756 GTAGGTCGCCGTAGCACG 60.278 66.667 2.27 2.27 42.11 5.34
2827 3373 2.103736 GGTAGGTCGCCGTAGCAC 59.896 66.667 0.00 0.00 39.83 4.40
2828 3374 3.511595 CGGTAGGTCGCCGTAGCA 61.512 66.667 0.00 0.00 43.84 3.49
2875 3421 2.045926 AACATGAGAGGGCCGTGC 60.046 61.111 0.65 0.00 0.00 5.34
2876 3422 2.401766 GCAACATGAGAGGGCCGTG 61.402 63.158 0.65 0.00 0.00 4.94
2877 3423 2.045926 GCAACATGAGAGGGCCGT 60.046 61.111 0.00 0.00 0.00 5.68
2878 3424 1.372087 GAAGCAACATGAGAGGGCCG 61.372 60.000 0.00 0.00 0.00 6.13
2879 3425 1.372087 CGAAGCAACATGAGAGGGCC 61.372 60.000 0.00 0.00 0.00 5.80
2880 3426 2.093216 CGAAGCAACATGAGAGGGC 58.907 57.895 0.00 0.00 0.00 5.19
2912 3458 2.436646 GGACATGACCAGCGTGGG 60.437 66.667 9.48 1.36 43.37 4.61
2913 3459 1.448540 GAGGACATGACCAGCGTGG 60.449 63.158 16.63 2.92 45.02 4.94
2914 3460 1.448540 GGAGGACATGACCAGCGTG 60.449 63.158 16.63 0.00 39.48 5.34
2915 3461 2.982130 GGAGGACATGACCAGCGT 59.018 61.111 16.63 0.00 0.00 5.07
2916 3462 2.202797 CGGAGGACATGACCAGCG 60.203 66.667 16.63 1.89 0.00 5.18
2917 3463 2.512515 GCGGAGGACATGACCAGC 60.513 66.667 16.63 13.84 0.00 4.85
2918 3464 2.187946 GGCGGAGGACATGACCAG 59.812 66.667 16.63 8.24 0.00 4.00
2919 3465 3.770040 CGGCGGAGGACATGACCA 61.770 66.667 16.63 0.00 0.00 4.02
2920 3466 3.432051 CTCGGCGGAGGACATGACC 62.432 68.421 13.25 6.05 36.61 4.02
2921 3467 2.105128 CTCGGCGGAGGACATGAC 59.895 66.667 13.25 0.00 36.61 3.06
2946 3492 2.283529 TGCGTCTTGAGGACCTCCC 61.284 63.158 19.11 3.55 41.64 4.30
2947 3493 1.079750 GTGCGTCTTGAGGACCTCC 60.080 63.158 19.11 2.69 41.64 4.30
2948 3494 1.444553 CGTGCGTCTTGAGGACCTC 60.445 63.158 15.13 15.13 41.64 3.85
2949 3495 1.901948 TCGTGCGTCTTGAGGACCT 60.902 57.895 0.00 0.00 41.64 3.85
2950 3496 1.733399 GTCGTGCGTCTTGAGGACC 60.733 63.158 0.00 0.00 41.64 4.46
2951 3497 2.081212 CGTCGTGCGTCTTGAGGAC 61.081 63.158 0.00 0.00 41.28 3.85
2952 3498 2.254350 CGTCGTGCGTCTTGAGGA 59.746 61.111 0.00 0.00 35.54 3.71
2953 3499 3.470567 GCGTCGTGCGTCTTGAGG 61.471 66.667 0.00 0.00 43.66 3.86
2997 3543 4.680237 TGAAGACGGCCAGCGTGG 62.680 66.667 2.24 0.25 41.55 4.94
2998 3544 3.114616 CTGAAGACGGCCAGCGTG 61.115 66.667 2.24 0.00 0.00 5.34
3019 3565 4.082523 AGGATGTCGTGCCCACCG 62.083 66.667 0.00 0.00 0.00 4.94
3020 3566 2.125106 GAGGATGTCGTGCCCACC 60.125 66.667 0.00 0.00 0.00 4.61
3021 3567 0.741221 GAAGAGGATGTCGTGCCCAC 60.741 60.000 0.00 0.00 0.00 4.61
3022 3568 1.596934 GAAGAGGATGTCGTGCCCA 59.403 57.895 0.00 0.00 0.00 5.36
3023 3569 1.153349 GGAAGAGGATGTCGTGCCC 60.153 63.158 0.00 0.00 0.00 5.36
3024 3570 1.153349 GGGAAGAGGATGTCGTGCC 60.153 63.158 0.00 0.00 37.96 5.01
3025 3571 1.153349 GGGGAAGAGGATGTCGTGC 60.153 63.158 0.00 0.00 0.00 5.34
3026 3572 1.522569 GGGGGAAGAGGATGTCGTG 59.477 63.158 0.00 0.00 0.00 4.35
3027 3573 4.051932 GGGGGAAGAGGATGTCGT 57.948 61.111 0.00 0.00 0.00 4.34
3041 3587 2.362120 ACAGGTCGTCGTAGGGGG 60.362 66.667 0.00 0.00 0.00 5.40
3042 3588 2.707849 CCACAGGTCGTCGTAGGGG 61.708 68.421 0.00 0.00 0.00 4.79
3043 3589 2.882876 CCACAGGTCGTCGTAGGG 59.117 66.667 0.00 0.00 0.00 3.53
3044 3590 2.181021 GCCACAGGTCGTCGTAGG 59.819 66.667 0.00 0.00 0.00 3.18
3045 3591 2.202440 CGCCACAGGTCGTCGTAG 60.202 66.667 0.00 0.00 0.00 3.51
3046 3592 4.409218 GCGCCACAGGTCGTCGTA 62.409 66.667 0.00 0.00 0.00 3.43
3073 3619 4.778415 CTCGAGGACGCACACCCG 62.778 72.222 3.91 0.00 39.58 5.28
3075 3621 3.973267 GAGCTCGAGGACGCACACC 62.973 68.421 15.58 0.00 39.58 4.16
3076 3622 2.479412 AAGAGCTCGAGGACGCACAC 62.479 60.000 15.58 0.00 39.58 3.82
3077 3623 2.201436 GAAGAGCTCGAGGACGCACA 62.201 60.000 15.58 0.00 39.58 4.57
3078 3624 1.515304 GAAGAGCTCGAGGACGCAC 60.515 63.158 15.58 0.00 39.58 5.34
3079 3625 1.927608 CTGAAGAGCTCGAGGACGCA 61.928 60.000 15.58 0.00 39.58 5.24
3080 3626 1.226547 CTGAAGAGCTCGAGGACGC 60.227 63.158 15.58 0.00 39.58 5.19
3081 3627 1.226547 GCTGAAGAGCTCGAGGACG 60.227 63.158 15.58 0.00 42.52 4.79
3082 3628 1.226547 CGCTGAAGAGCTCGAGGAC 60.227 63.158 15.58 0.00 43.77 3.85
3083 3629 3.057547 GCGCTGAAGAGCTCGAGGA 62.058 63.158 15.58 0.00 43.77 3.71
3084 3630 2.581953 GCGCTGAAGAGCTCGAGG 60.582 66.667 15.58 1.48 43.77 4.63
3088 3634 3.847709 GCACGCGCTGAAGAGCTC 61.848 66.667 5.73 5.27 43.77 4.09
3102 3648 4.681978 AAGGACTGGACGCGGCAC 62.682 66.667 17.00 3.30 0.00 5.01
3103 3649 4.373116 GAAGGACTGGACGCGGCA 62.373 66.667 17.00 0.00 0.00 5.69
3105 3651 4.796231 CGGAAGGACTGGACGCGG 62.796 72.222 12.47 0.00 0.00 6.46
3108 3654 3.691342 TGGCGGAAGGACTGGACG 61.691 66.667 0.00 0.00 0.00 4.79
3109 3655 2.047179 GTGGCGGAAGGACTGGAC 60.047 66.667 0.00 0.00 0.00 4.02
3110 3656 1.899437 GATGTGGCGGAAGGACTGGA 61.899 60.000 0.00 0.00 0.00 3.86
3111 3657 1.450312 GATGTGGCGGAAGGACTGG 60.450 63.158 0.00 0.00 0.00 4.00
3112 3658 1.450312 GGATGTGGCGGAAGGACTG 60.450 63.158 0.00 0.00 0.00 3.51
3113 3659 2.990479 GGATGTGGCGGAAGGACT 59.010 61.111 0.00 0.00 0.00 3.85
3114 3660 2.511600 CGGATGTGGCGGAAGGAC 60.512 66.667 0.00 0.00 0.00 3.85
3115 3661 4.467084 GCGGATGTGGCGGAAGGA 62.467 66.667 0.00 0.00 0.00 3.36
3123 3669 3.758088 CTCGTCCTCGCGGATGTGG 62.758 68.421 13.19 4.61 45.02 4.17
3124 3670 2.278206 CTCGTCCTCGCGGATGTG 60.278 66.667 13.19 7.39 45.02 3.21
3125 3671 3.518998 CCTCGTCCTCGCGGATGT 61.519 66.667 13.19 0.00 43.64 3.06
3126 3672 4.933064 GCCTCGTCCTCGCGGATG 62.933 72.222 6.13 7.36 43.64 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.