Multiple sequence alignment - TraesCS3D01G230300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G230300 chr3D 100.000 4732 0 0 1 4732 313719759 313715028 0.000000e+00 8739.0
1 TraesCS3D01G230300 chr3D 74.728 1286 246 46 1533 2777 313785297 313784050 7.070000e-138 501.0
2 TraesCS3D01G230300 chr3D 83.821 513 78 3 2845 3356 313784005 313783497 2.560000e-132 483.0
3 TraesCS3D01G230300 chr3D 93.182 264 13 2 513 772 461592028 461592290 2.670000e-102 383.0
4 TraesCS3D01G230300 chr3D 92.776 263 15 1 513 771 346865475 346865213 1.240000e-100 377.0
5 TraesCS3D01G230300 chr3D 91.667 264 18 1 512 771 494598929 494599192 3.480000e-96 363.0
6 TraesCS3D01G230300 chr3D 90.809 272 18 4 512 778 51106875 51106606 1.620000e-94 357.0
7 TraesCS3D01G230300 chr3D 80.882 204 39 0 3499 3702 313783366 313783163 1.360000e-35 161.0
8 TraesCS3D01G230300 chr3D 95.312 64 2 1 6 68 409432219 409432156 3.010000e-17 100.0
9 TraesCS3D01G230300 chr3A 95.809 3961 116 19 798 4732 416192201 416188265 0.000000e+00 6349.0
10 TraesCS3D01G230300 chr3A 74.747 1287 244 48 1533 2777 416303335 416302088 7.070000e-138 501.0
11 TraesCS3D01G230300 chr3A 84.241 514 74 6 2845 3356 416302043 416301535 1.180000e-135 494.0
12 TraesCS3D01G230300 chr3A 80.392 204 40 0 3499 3702 416301406 416301203 6.340000e-34 156.0
13 TraesCS3D01G230300 chr3A 95.238 63 2 1 445 507 716387447 716387386 1.080000e-16 99.0
14 TraesCS3D01G230300 chr3A 97.727 44 0 1 4144 4187 416188762 416188720 1.830000e-09 75.0
15 TraesCS3D01G230300 chr3B 96.533 2394 70 5 815 3207 405817343 405819724 0.000000e+00 3949.0
16 TraesCS3D01G230300 chr3B 93.377 1057 36 17 3201 4228 405825728 405826779 0.000000e+00 1533.0
17 TraesCS3D01G230300 chr3B 74.786 1285 247 44 1533 2777 405788964 405790211 1.520000e-139 507.0
18 TraesCS3D01G230300 chr3B 83.883 515 75 6 2845 3356 405790256 405790765 7.120000e-133 484.0
19 TraesCS3D01G230300 chr3B 88.800 375 11 6 4293 4646 405830551 405830915 9.410000e-117 431.0
20 TraesCS3D01G230300 chr3B 80.882 204 39 0 3499 3702 405790896 405791099 1.360000e-35 161.0
21 TraesCS3D01G230300 chr4D 93.561 264 12 2 513 772 497251725 497251987 5.740000e-104 388.0
22 TraesCS3D01G230300 chr4D 91.667 264 15 4 513 771 336842012 336841751 4.500000e-95 359.0
23 TraesCS3D01G230300 chr4D 93.939 66 3 1 4 68 255357562 255357497 1.080000e-16 99.0
24 TraesCS3D01G230300 chr5D 92.395 263 16 1 513 771 60522495 60522757 5.780000e-99 372.0
25 TraesCS3D01G230300 chr5D 92.537 67 3 1 4 68 56384489 56384423 1.400000e-15 95.3
26 TraesCS3D01G230300 chr5D 92.537 67 3 1 4 68 345147066 345147000 1.400000e-15 95.3
27 TraesCS3D01G230300 chr1D 91.321 265 19 1 513 773 413416253 413416517 4.500000e-95 359.0
28 TraesCS3D01G230300 chr1D 91.429 70 4 1 1 68 133456834 133456903 1.400000e-15 95.3
29 TraesCS3D01G230300 chr1D 91.429 70 4 1 1 68 268669871 268669940 1.400000e-15 95.3
30 TraesCS3D01G230300 chr1D 91.429 70 4 1 1 68 479572469 479572538 1.400000e-15 95.3
31 TraesCS3D01G230300 chr7D 90.875 263 20 1 513 771 20289129 20288867 2.710000e-92 350.0
32 TraesCS3D01G230300 chr7D 92.857 70 3 1 1 68 276549664 276549595 3.010000e-17 100.0
33 TraesCS3D01G230300 chr7D 91.228 57 5 0 450 506 1743964 1743908 1.410000e-10 78.7
34 TraesCS3D01G230300 chr6B 93.077 130 1 1 4216 4337 699597210 699597081 2.910000e-42 183.0
35 TraesCS3D01G230300 chr6B 92.308 130 2 1 4216 4337 133425273 133425402 1.350000e-40 178.0
36 TraesCS3D01G230300 chr6B 91.538 130 3 1 4216 4337 254734470 254734599 6.300000e-39 172.0
37 TraesCS3D01G230300 chr6B 97.015 67 2 0 3998 4064 254734406 254734472 3.870000e-21 113.0
38 TraesCS3D01G230300 chr6B 97.015 67 2 0 3998 4064 699597274 699597208 3.870000e-21 113.0
39 TraesCS3D01G230300 chr6B 95.522 67 3 0 3998 4064 133425209 133425275 1.800000e-19 108.0
40 TraesCS3D01G230300 chr6B 95.745 47 1 1 4144 4190 699597178 699597133 1.830000e-09 75.0
41 TraesCS3D01G230300 chr6B 97.674 43 0 1 4144 4186 133425305 133425346 6.570000e-09 73.1
42 TraesCS3D01G230300 chr4A 93.077 130 1 1 4216 4337 642324188 642324317 2.910000e-42 183.0
43 TraesCS3D01G230300 chr4A 91.339 127 11 0 2845 2971 674219028 674218902 1.750000e-39 174.0
44 TraesCS3D01G230300 chr4A 97.015 67 2 0 3998 4064 642324124 642324190 3.870000e-21 113.0
45 TraesCS3D01G230300 chr4A 91.228 57 5 0 450 506 742971745 742971801 1.410000e-10 78.7
46 TraesCS3D01G230300 chr4A 97.727 44 0 1 4144 4187 642324220 642324262 1.830000e-09 75.0
47 TraesCS3D01G230300 chr2B 93.077 130 1 1 4216 4337 785837803 785837932 2.910000e-42 183.0
48 TraesCS3D01G230300 chr2B 97.015 67 2 0 3998 4064 785837739 785837805 3.870000e-21 113.0
49 TraesCS3D01G230300 chr2B 89.855 69 7 0 446 514 142869610 142869542 6.520000e-14 89.8
50 TraesCS3D01G230300 chr2B 88.710 62 7 0 442 503 676589128 676589067 5.080000e-10 76.8
51 TraesCS3D01G230300 chr2B 97.727 44 0 1 4144 4187 785837835 785837877 1.830000e-09 75.0
52 TraesCS3D01G230300 chr1B 93.077 130 1 1 4216 4337 365156243 365156372 2.910000e-42 183.0
53 TraesCS3D01G230300 chr1B 92.308 130 2 1 4216 4337 53786392 53786263 1.350000e-40 178.0
54 TraesCS3D01G230300 chr1B 92.308 130 2 1 4216 4337 567127068 567126939 1.350000e-40 178.0
55 TraesCS3D01G230300 chr1B 92.308 130 2 1 4216 4337 647097617 647097746 1.350000e-40 178.0
56 TraesCS3D01G230300 chr1B 97.015 67 2 0 3998 4064 365156179 365156245 3.870000e-21 113.0
57 TraesCS3D01G230300 chr1B 98.413 63 1 0 4002 4064 567127128 567127066 1.390000e-20 111.0
58 TraesCS3D01G230300 chr1B 98.413 63 1 0 4002 4064 647097557 647097619 1.390000e-20 111.0
59 TraesCS3D01G230300 chr1B 95.745 47 1 1 4144 4190 53786360 53786315 1.830000e-09 75.0
60 TraesCS3D01G230300 chr1B 97.727 44 0 1 4144 4187 365156275 365156317 1.830000e-09 75.0
61 TraesCS3D01G230300 chr1B 95.745 47 1 1 4144 4190 567127036 567126991 1.830000e-09 75.0
62 TraesCS3D01G230300 chr7B 92.126 127 10 0 2845 2971 377732525 377732651 3.760000e-41 180.0
63 TraesCS3D01G230300 chr7B 91.339 127 11 0 2845 2971 676753395 676753269 1.750000e-39 174.0
64 TraesCS3D01G230300 chr7B 91.339 127 11 0 2845 2971 745420054 745419928 1.750000e-39 174.0
65 TraesCS3D01G230300 chr7B 91.538 130 3 1 4216 4337 606877813 606877942 6.300000e-39 172.0
66 TraesCS3D01G230300 chr7B 95.455 66 3 0 3998 4063 565692391 565692326 6.480000e-19 106.0
67 TraesCS3D01G230300 chr7B 97.727 44 0 1 4144 4187 606877845 606877887 1.830000e-09 75.0
68 TraesCS3D01G230300 chr7A 92.126 127 10 0 2845 2971 646119789 646119663 3.760000e-41 180.0
69 TraesCS3D01G230300 chr7A 91.379 58 5 0 450 507 430231202 430231145 3.930000e-11 80.5
70 TraesCS3D01G230300 chr5B 92.126 127 10 0 2845 2971 655601017 655600891 3.760000e-41 180.0
71 TraesCS3D01G230300 chr5B 92.308 130 2 1 4216 4337 531923584 531923455 1.350000e-40 178.0
72 TraesCS3D01G230300 chr5B 92.188 128 1 2 4216 4335 660758552 660758678 6.300000e-39 172.0
73 TraesCS3D01G230300 chr5B 90.000 130 5 1 4216 4337 524509189 524509318 1.360000e-35 161.0
74 TraesCS3D01G230300 chr5B 88.189 127 15 0 2845 2971 40806309 40806183 8.200000e-33 152.0
75 TraesCS3D01G230300 chr5B 97.015 67 2 0 3998 4064 531923648 531923582 3.870000e-21 113.0
76 TraesCS3D01G230300 chr5B 95.522 67 3 0 3998 4064 660758488 660758554 1.800000e-19 108.0
77 TraesCS3D01G230300 chr5B 95.082 61 3 0 4004 4064 524509131 524509191 3.900000e-16 97.1
78 TraesCS3D01G230300 chr5B 91.304 69 6 0 446 514 137736034 137736102 1.400000e-15 95.3
79 TraesCS3D01G230300 chr5B 92.537 67 3 1 4 68 180881694 180881628 1.400000e-15 95.3
80 TraesCS3D01G230300 chr5B 97.727 44 0 1 4144 4187 660758584 660758626 1.830000e-09 75.0
81 TraesCS3D01G230300 chr5B 100.000 38 0 0 4144 4181 531923552 531923515 2.360000e-08 71.3
82 TraesCS3D01G230300 chr5B 95.455 44 1 1 4144 4187 524509221 524509263 8.500000e-08 69.4
83 TraesCS3D01G230300 chr2A 90.840 131 12 0 2845 2975 257531910 257531780 4.870000e-40 176.0
84 TraesCS3D01G230300 chr4B 91.538 130 3 1 4216 4337 230797011 230797140 6.300000e-39 172.0
85 TraesCS3D01G230300 chr4B 90.769 130 4 1 4216 4337 490553558 490553687 2.930000e-37 167.0
86 TraesCS3D01G230300 chr4B 97.015 67 2 0 3998 4064 230796947 230797013 3.870000e-21 113.0
87 TraesCS3D01G230300 chr4B 94.030 67 4 0 3998 4064 490553494 490553560 8.380000e-18 102.0
88 TraesCS3D01G230300 chr5A 89.764 127 13 0 2845 2971 360893271 360893397 3.790000e-36 163.0
89 TraesCS3D01G230300 chr5A 89.764 127 13 0 2845 2971 511159625 511159751 3.790000e-36 163.0
90 TraesCS3D01G230300 chr1A 88.406 69 8 0 446 514 67222597 67222665 3.030000e-12 84.2
91 TraesCS3D01G230300 chr2D 87.879 66 8 0 442 507 564921782 564921717 1.410000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G230300 chr3D 313715028 313719759 4731 True 8739.000000 8739 100.000000 1 4732 1 chr3D.!!$R2 4731
1 TraesCS3D01G230300 chr3D 313783163 313785297 2134 True 381.666667 501 79.810333 1533 3702 3 chr3D.!!$R5 2169
2 TraesCS3D01G230300 chr3A 416188265 416192201 3936 True 3212.000000 6349 96.768000 798 4732 2 chr3A.!!$R2 3934
3 TraesCS3D01G230300 chr3A 416301203 416303335 2132 True 383.666667 501 79.793333 1533 3702 3 chr3A.!!$R3 2169
4 TraesCS3D01G230300 chr3B 405817343 405819724 2381 False 3949.000000 3949 96.533000 815 3207 1 chr3B.!!$F1 2392
5 TraesCS3D01G230300 chr3B 405825728 405830915 5187 False 982.000000 1533 91.088500 3201 4646 2 chr3B.!!$F3 1445
6 TraesCS3D01G230300 chr3B 405788964 405791099 2135 False 384.000000 507 79.850333 1533 3702 3 chr3B.!!$F2 2169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
314 315 0.108945 CCGAGGACAACGGGAACTAC 60.109 60.000 0.00 0.0 45.65 2.73 F
1180 1182 0.104120 TATCGATGCGGGGACAAGTG 59.896 55.000 8.54 0.0 0.00 3.16 F
1227 1229 0.589229 GATCGTACCTCAGCGACACG 60.589 60.000 0.00 0.0 40.03 4.49 F
1812 1828 0.662619 CTTTCGCCTTCAGCACAACA 59.337 50.000 0.00 0.0 44.04 3.33 F
2105 2139 1.469703 CAAAGAAGCATGCGATCCACA 59.530 47.619 18.99 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1384 1386 0.036388 GTCATTCGAGGCCAACTCCA 60.036 55.000 5.01 0.00 43.57 3.86 R
1988 2022 0.527565 CAACAGCCACTTGGTATGCC 59.472 55.000 0.00 0.00 37.57 4.40 R
2105 2139 1.480954 GATGGTACGACCTGACATGGT 59.519 52.381 0.00 0.00 44.10 3.55 R
2967 3002 2.147150 GAGACCTTTGTTCTGGCAGAC 58.853 52.381 18.55 12.93 0.00 3.51 R
3967 4027 0.951040 ACGGCTCGCTTTCCTTCTTG 60.951 55.000 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.911918 TTTTACATAAGTGTTAGGATGTGTGT 57.088 30.769 0.00 0.00 39.77 3.72
36 37 8.542497 TTTACATAAGTGTTAGGATGTGTGTC 57.458 34.615 0.00 0.00 39.77 3.67
37 38 5.488341 ACATAAGTGTTAGGATGTGTGTCC 58.512 41.667 0.00 0.00 34.01 4.02
38 39 6.439375 TACATAAGTGTTAGGATGTGTGTCCT 59.561 38.462 0.65 0.65 43.95 3.85
39 40 4.706842 AAGTGTTAGGATGTGTGTCCTT 57.293 40.909 0.15 0.00 46.45 3.36
40 41 4.273148 AGTGTTAGGATGTGTGTCCTTC 57.727 45.455 0.15 0.00 46.45 3.46
41 42 3.646162 AGTGTTAGGATGTGTGTCCTTCA 59.354 43.478 0.15 0.00 46.45 3.02
42 43 4.102524 AGTGTTAGGATGTGTGTCCTTCAA 59.897 41.667 0.15 0.00 46.45 2.69
43 44 4.819630 GTGTTAGGATGTGTGTCCTTCAAA 59.180 41.667 0.15 0.00 46.45 2.69
44 45 5.049405 GTGTTAGGATGTGTGTCCTTCAAAG 60.049 44.000 0.15 0.00 46.45 2.77
45 46 5.163248 TGTTAGGATGTGTGTCCTTCAAAGA 60.163 40.000 0.15 0.00 46.45 2.52
46 47 4.437682 AGGATGTGTGTCCTTCAAAGAA 57.562 40.909 0.00 0.00 46.45 2.52
47 48 4.137543 AGGATGTGTGTCCTTCAAAGAAC 58.862 43.478 0.00 0.00 46.45 3.01
48 49 3.882888 GGATGTGTGTCCTTCAAAGAACA 59.117 43.478 0.00 0.00 35.32 3.18
49 50 4.520492 GGATGTGTGTCCTTCAAAGAACAT 59.480 41.667 0.00 0.00 35.32 2.71
50 51 5.010012 GGATGTGTGTCCTTCAAAGAACATT 59.990 40.000 0.00 0.00 35.32 2.71
51 52 5.499139 TGTGTGTCCTTCAAAGAACATTC 57.501 39.130 0.00 0.00 0.00 2.67
52 53 4.035091 TGTGTGTCCTTCAAAGAACATTCG 59.965 41.667 0.00 0.00 0.00 3.34
53 54 4.272504 GTGTGTCCTTCAAAGAACATTCGA 59.727 41.667 0.00 0.00 0.00 3.71
54 55 4.878971 TGTGTCCTTCAAAGAACATTCGAA 59.121 37.500 0.00 0.00 0.00 3.71
55 56 5.007626 TGTGTCCTTCAAAGAACATTCGAAG 59.992 40.000 3.35 0.00 34.25 3.79
56 57 5.236478 GTGTCCTTCAAAGAACATTCGAAGA 59.764 40.000 3.35 0.00 36.08 2.87
57 58 5.997746 TGTCCTTCAAAGAACATTCGAAGAT 59.002 36.000 3.35 0.00 36.08 2.40
58 59 6.486657 TGTCCTTCAAAGAACATTCGAAGATT 59.513 34.615 3.35 0.00 36.08 2.40
59 60 7.018235 GTCCTTCAAAGAACATTCGAAGATTC 58.982 38.462 13.66 13.66 36.08 2.52
60 61 6.936900 TCCTTCAAAGAACATTCGAAGATTCT 59.063 34.615 16.93 16.93 36.08 2.40
61 62 7.020010 CCTTCAAAGAACATTCGAAGATTCTG 58.980 38.462 21.18 13.71 36.08 3.02
62 63 7.095060 CCTTCAAAGAACATTCGAAGATTCTGA 60.095 37.037 21.18 15.23 36.08 3.27
63 64 7.728847 TCAAAGAACATTCGAAGATTCTGAA 57.271 32.000 21.18 11.06 35.04 3.02
64 65 8.153479 TCAAAGAACATTCGAAGATTCTGAAA 57.847 30.769 21.18 10.81 35.04 2.69
65 66 8.786898 TCAAAGAACATTCGAAGATTCTGAAAT 58.213 29.630 21.18 8.23 35.04 2.17
69 70 9.829507 AGAACATTCGAAGATTCTGAAATATCT 57.170 29.630 20.27 6.47 35.04 1.98
71 72 8.600449 ACATTCGAAGATTCTGAAATATCTCC 57.400 34.615 3.35 0.00 35.04 3.71
72 73 7.659390 ACATTCGAAGATTCTGAAATATCTCCC 59.341 37.037 3.35 0.00 35.04 4.30
73 74 6.985653 TCGAAGATTCTGAAATATCTCCCT 57.014 37.500 0.00 0.00 30.95 4.20
74 75 6.987386 TCGAAGATTCTGAAATATCTCCCTC 58.013 40.000 0.00 0.00 30.95 4.30
75 76 6.551227 TCGAAGATTCTGAAATATCTCCCTCA 59.449 38.462 0.00 0.00 30.95 3.86
76 77 7.234371 TCGAAGATTCTGAAATATCTCCCTCAT 59.766 37.037 0.00 0.00 30.95 2.90
77 78 8.526978 CGAAGATTCTGAAATATCTCCCTCATA 58.473 37.037 0.00 0.00 30.95 2.15
83 84 8.789767 TCTGAAATATCTCCCTCATATATCCC 57.210 38.462 0.00 0.00 0.00 3.85
84 85 8.354486 TCTGAAATATCTCCCTCATATATCCCA 58.646 37.037 0.00 0.00 0.00 4.37
85 86 9.168553 CTGAAATATCTCCCTCATATATCCCAT 57.831 37.037 0.00 0.00 0.00 4.00
86 87 8.942033 TGAAATATCTCCCTCATATATCCCATG 58.058 37.037 0.00 0.00 0.00 3.66
87 88 9.163894 GAAATATCTCCCTCATATATCCCATGA 57.836 37.037 0.00 0.00 0.00 3.07
88 89 9.524903 AAATATCTCCCTCATATATCCCATGAA 57.475 33.333 0.00 0.00 32.20 2.57
89 90 6.821616 ATCTCCCTCATATATCCCATGAAC 57.178 41.667 0.00 0.00 32.20 3.18
90 91 5.032846 TCTCCCTCATATATCCCATGAACC 58.967 45.833 0.00 0.00 32.20 3.62
91 92 5.035556 CTCCCTCATATATCCCATGAACCT 58.964 45.833 0.00 0.00 32.20 3.50
92 93 5.032846 TCCCTCATATATCCCATGAACCTC 58.967 45.833 0.00 0.00 32.20 3.85
93 94 4.164988 CCCTCATATATCCCATGAACCTCC 59.835 50.000 0.00 0.00 32.20 4.30
94 95 4.784838 CCTCATATATCCCATGAACCTCCA 59.215 45.833 0.00 0.00 32.20 3.86
95 96 5.251468 CCTCATATATCCCATGAACCTCCAA 59.749 44.000 0.00 0.00 32.20 3.53
96 97 6.378661 TCATATATCCCATGAACCTCCAAG 57.621 41.667 0.00 0.00 29.55 3.61
97 98 5.851693 TCATATATCCCATGAACCTCCAAGT 59.148 40.000 0.00 0.00 29.55 3.16
98 99 7.022496 TCATATATCCCATGAACCTCCAAGTA 58.978 38.462 0.00 0.00 29.55 2.24
99 100 7.515861 TCATATATCCCATGAACCTCCAAGTAA 59.484 37.037 0.00 0.00 29.55 2.24
100 101 4.946160 ATCCCATGAACCTCCAAGTAAA 57.054 40.909 0.00 0.00 0.00 2.01
101 102 4.733077 TCCCATGAACCTCCAAGTAAAA 57.267 40.909 0.00 0.00 0.00 1.52
102 103 4.403734 TCCCATGAACCTCCAAGTAAAAC 58.596 43.478 0.00 0.00 0.00 2.43
103 104 3.509967 CCCATGAACCTCCAAGTAAAACC 59.490 47.826 0.00 0.00 0.00 3.27
104 105 4.148838 CCATGAACCTCCAAGTAAAACCA 58.851 43.478 0.00 0.00 0.00 3.67
105 106 4.772100 CCATGAACCTCCAAGTAAAACCAT 59.228 41.667 0.00 0.00 0.00 3.55
106 107 5.105756 CCATGAACCTCCAAGTAAAACCATC 60.106 44.000 0.00 0.00 0.00 3.51
107 108 5.055265 TGAACCTCCAAGTAAAACCATCA 57.945 39.130 0.00 0.00 0.00 3.07
108 109 5.640147 TGAACCTCCAAGTAAAACCATCAT 58.360 37.500 0.00 0.00 0.00 2.45
109 110 5.710099 TGAACCTCCAAGTAAAACCATCATC 59.290 40.000 0.00 0.00 0.00 2.92
110 111 4.600062 ACCTCCAAGTAAAACCATCATCC 58.400 43.478 0.00 0.00 0.00 3.51
111 112 4.292306 ACCTCCAAGTAAAACCATCATCCT 59.708 41.667 0.00 0.00 0.00 3.24
112 113 4.884164 CCTCCAAGTAAAACCATCATCCTC 59.116 45.833 0.00 0.00 0.00 3.71
113 114 4.855340 TCCAAGTAAAACCATCATCCTCC 58.145 43.478 0.00 0.00 0.00 4.30
114 115 4.290985 TCCAAGTAAAACCATCATCCTCCA 59.709 41.667 0.00 0.00 0.00 3.86
115 116 5.044179 TCCAAGTAAAACCATCATCCTCCAT 60.044 40.000 0.00 0.00 0.00 3.41
116 117 5.068198 CCAAGTAAAACCATCATCCTCCATG 59.932 44.000 0.00 0.00 0.00 3.66
117 118 5.715439 AGTAAAACCATCATCCTCCATGA 57.285 39.130 0.00 0.00 46.01 3.07
118 119 6.078456 AGTAAAACCATCATCCTCCATGAA 57.922 37.500 0.00 0.00 45.06 2.57
119 120 6.125029 AGTAAAACCATCATCCTCCATGAAG 58.875 40.000 0.00 0.00 45.06 3.02
120 121 4.598036 AAACCATCATCCTCCATGAAGT 57.402 40.909 0.00 0.00 45.06 3.01
121 122 3.572632 ACCATCATCCTCCATGAAGTG 57.427 47.619 0.00 0.00 45.06 3.16
122 123 2.848694 ACCATCATCCTCCATGAAGTGT 59.151 45.455 0.00 0.00 45.06 3.55
123 124 3.118112 ACCATCATCCTCCATGAAGTGTC 60.118 47.826 0.00 0.00 45.06 3.67
124 125 3.118149 CCATCATCCTCCATGAAGTGTCA 60.118 47.826 0.00 0.00 45.06 3.58
125 126 4.520179 CATCATCCTCCATGAAGTGTCAA 58.480 43.478 0.00 0.00 45.06 3.18
126 127 4.849813 TCATCCTCCATGAAGTGTCAAT 57.150 40.909 0.00 0.00 38.68 2.57
127 128 5.955961 TCATCCTCCATGAAGTGTCAATA 57.044 39.130 0.00 0.00 38.68 1.90
128 129 6.505048 TCATCCTCCATGAAGTGTCAATAT 57.495 37.500 0.00 0.00 38.68 1.28
129 130 6.903516 TCATCCTCCATGAAGTGTCAATATT 58.096 36.000 0.00 0.00 38.68 1.28
130 131 7.348815 TCATCCTCCATGAAGTGTCAATATTT 58.651 34.615 0.00 0.00 38.68 1.40
131 132 7.283807 TCATCCTCCATGAAGTGTCAATATTTG 59.716 37.037 0.00 0.00 38.68 2.32
132 133 5.357878 TCCTCCATGAAGTGTCAATATTTGC 59.642 40.000 0.00 0.00 37.30 3.68
133 134 5.359009 CCTCCATGAAGTGTCAATATTTGCT 59.641 40.000 0.00 0.00 37.30 3.91
134 135 6.441093 TCCATGAAGTGTCAATATTTGCTC 57.559 37.500 0.00 0.00 37.30 4.26
135 136 6.182627 TCCATGAAGTGTCAATATTTGCTCT 58.817 36.000 0.00 0.00 37.30 4.09
136 137 7.337938 TCCATGAAGTGTCAATATTTGCTCTA 58.662 34.615 0.00 0.00 37.30 2.43
137 138 7.994911 TCCATGAAGTGTCAATATTTGCTCTAT 59.005 33.333 0.00 0.00 37.30 1.98
138 139 8.074370 CCATGAAGTGTCAATATTTGCTCTATG 58.926 37.037 0.00 0.00 37.30 2.23
139 140 7.019774 TGAAGTGTCAATATTTGCTCTATGC 57.980 36.000 0.00 0.00 43.25 3.14
140 141 6.825213 TGAAGTGTCAATATTTGCTCTATGCT 59.175 34.615 0.00 0.00 43.37 3.79
141 142 7.986889 TGAAGTGTCAATATTTGCTCTATGCTA 59.013 33.333 0.00 0.00 43.37 3.49
142 143 8.915057 AAGTGTCAATATTTGCTCTATGCTAT 57.085 30.769 0.00 0.00 43.37 2.97
143 144 8.320396 AGTGTCAATATTTGCTCTATGCTATG 57.680 34.615 0.00 0.00 43.37 2.23
144 145 7.389884 AGTGTCAATATTTGCTCTATGCTATGG 59.610 37.037 0.00 0.00 43.37 2.74
145 146 7.173907 GTGTCAATATTTGCTCTATGCTATGGT 59.826 37.037 0.00 0.00 43.37 3.55
146 147 7.173735 TGTCAATATTTGCTCTATGCTATGGTG 59.826 37.037 0.00 0.00 43.37 4.17
147 148 7.173907 GTCAATATTTGCTCTATGCTATGGTGT 59.826 37.037 0.00 0.00 43.37 4.16
148 149 7.720957 TCAATATTTGCTCTATGCTATGGTGTT 59.279 33.333 0.00 0.00 43.37 3.32
149 150 7.678947 ATATTTGCTCTATGCTATGGTGTTC 57.321 36.000 0.00 0.00 43.37 3.18
150 151 3.097877 TGCTCTATGCTATGGTGTTCG 57.902 47.619 0.00 0.00 43.37 3.95
151 152 2.693074 TGCTCTATGCTATGGTGTTCGA 59.307 45.455 0.00 0.00 43.37 3.71
152 153 3.321968 TGCTCTATGCTATGGTGTTCGAT 59.678 43.478 0.00 0.00 43.37 3.59
153 154 4.202253 TGCTCTATGCTATGGTGTTCGATT 60.202 41.667 0.00 0.00 43.37 3.34
154 155 4.151335 GCTCTATGCTATGGTGTTCGATTG 59.849 45.833 0.00 0.00 38.95 2.67
155 156 5.276461 TCTATGCTATGGTGTTCGATTGT 57.724 39.130 0.00 0.00 0.00 2.71
156 157 5.049828 TCTATGCTATGGTGTTCGATTGTG 58.950 41.667 0.00 0.00 0.00 3.33
157 158 2.355197 TGCTATGGTGTTCGATTGTGG 58.645 47.619 0.00 0.00 0.00 4.17
158 159 2.027653 TGCTATGGTGTTCGATTGTGGA 60.028 45.455 0.00 0.00 0.00 4.02
159 160 2.609459 GCTATGGTGTTCGATTGTGGAG 59.391 50.000 0.00 0.00 0.00 3.86
160 161 2.113860 ATGGTGTTCGATTGTGGAGG 57.886 50.000 0.00 0.00 0.00 4.30
161 162 1.052617 TGGTGTTCGATTGTGGAGGA 58.947 50.000 0.00 0.00 0.00 3.71
162 163 1.270625 TGGTGTTCGATTGTGGAGGAC 60.271 52.381 0.00 0.00 0.00 3.85
163 164 1.068474 GTGTTCGATTGTGGAGGACG 58.932 55.000 0.00 0.00 0.00 4.79
164 165 0.677288 TGTTCGATTGTGGAGGACGT 59.323 50.000 0.00 0.00 0.00 4.34
165 166 1.336517 TGTTCGATTGTGGAGGACGTC 60.337 52.381 7.13 7.13 0.00 4.34
166 167 0.109458 TTCGATTGTGGAGGACGTCG 60.109 55.000 9.92 0.00 36.92 5.12
167 168 0.956902 TCGATTGTGGAGGACGTCGA 60.957 55.000 9.92 0.00 40.15 4.20
168 169 0.109458 CGATTGTGGAGGACGTCGAA 60.109 55.000 9.92 0.00 37.45 3.71
169 170 1.347320 GATTGTGGAGGACGTCGAAC 58.653 55.000 9.92 5.60 0.00 3.95
170 171 0.677288 ATTGTGGAGGACGTCGAACA 59.323 50.000 9.92 8.18 0.00 3.18
171 172 0.677288 TTGTGGAGGACGTCGAACAT 59.323 50.000 9.92 0.00 0.00 2.71
172 173 0.242825 TGTGGAGGACGTCGAACATC 59.757 55.000 9.92 2.40 0.00 3.06
173 174 0.526662 GTGGAGGACGTCGAACATCT 59.473 55.000 9.92 0.00 0.00 2.90
174 175 1.067776 GTGGAGGACGTCGAACATCTT 60.068 52.381 9.92 0.00 0.00 2.40
175 176 1.201647 TGGAGGACGTCGAACATCTTC 59.798 52.381 9.92 0.00 0.00 2.87
176 177 1.201647 GGAGGACGTCGAACATCTTCA 59.798 52.381 9.92 0.00 0.00 3.02
177 178 2.352421 GGAGGACGTCGAACATCTTCAA 60.352 50.000 9.92 0.00 0.00 2.69
178 179 2.917971 GAGGACGTCGAACATCTTCAAG 59.082 50.000 9.92 0.00 0.00 3.02
179 180 2.296471 AGGACGTCGAACATCTTCAAGT 59.704 45.455 9.92 0.00 0.00 3.16
180 181 2.408704 GGACGTCGAACATCTTCAAGTG 59.591 50.000 9.92 0.00 0.00 3.16
181 182 3.305964 GACGTCGAACATCTTCAAGTGA 58.694 45.455 0.00 0.00 0.00 3.41
182 183 3.050619 ACGTCGAACATCTTCAAGTGAC 58.949 45.455 0.00 0.00 0.00 3.67
183 184 2.408704 CGTCGAACATCTTCAAGTGACC 59.591 50.000 0.00 0.00 0.00 4.02
184 185 2.737252 GTCGAACATCTTCAAGTGACCC 59.263 50.000 0.00 0.00 0.00 4.46
185 186 2.076863 CGAACATCTTCAAGTGACCCC 58.923 52.381 0.00 0.00 0.00 4.95
186 187 2.289694 CGAACATCTTCAAGTGACCCCT 60.290 50.000 0.00 0.00 0.00 4.79
187 188 3.339141 GAACATCTTCAAGTGACCCCTC 58.661 50.000 0.00 0.00 0.00 4.30
188 189 1.630878 ACATCTTCAAGTGACCCCTCC 59.369 52.381 0.00 0.00 0.00 4.30
189 190 1.065126 CATCTTCAAGTGACCCCTCCC 60.065 57.143 0.00 0.00 0.00 4.30
190 191 0.193574 TCTTCAAGTGACCCCTCCCT 59.806 55.000 0.00 0.00 0.00 4.20
191 192 0.615850 CTTCAAGTGACCCCTCCCTC 59.384 60.000 0.00 0.00 0.00 4.30
192 193 0.193574 TTCAAGTGACCCCTCCCTCT 59.806 55.000 0.00 0.00 0.00 3.69
193 194 1.089978 TCAAGTGACCCCTCCCTCTA 58.910 55.000 0.00 0.00 0.00 2.43
194 195 1.651770 TCAAGTGACCCCTCCCTCTAT 59.348 52.381 0.00 0.00 0.00 1.98
195 196 1.765314 CAAGTGACCCCTCCCTCTATG 59.235 57.143 0.00 0.00 0.00 2.23
196 197 1.019650 AGTGACCCCTCCCTCTATGT 58.980 55.000 0.00 0.00 0.00 2.29
197 198 2.224077 AGTGACCCCTCCCTCTATGTA 58.776 52.381 0.00 0.00 0.00 2.29
198 199 2.590611 AGTGACCCCTCCCTCTATGTAA 59.409 50.000 0.00 0.00 0.00 2.41
199 200 2.699321 GTGACCCCTCCCTCTATGTAAC 59.301 54.545 0.00 0.00 0.00 2.50
200 201 1.962100 GACCCCTCCCTCTATGTAACG 59.038 57.143 0.00 0.00 0.00 3.18
201 202 1.572415 ACCCCTCCCTCTATGTAACGA 59.428 52.381 0.00 0.00 0.00 3.85
202 203 2.179424 ACCCCTCCCTCTATGTAACGAT 59.821 50.000 0.00 0.00 0.00 3.73
203 204 3.240302 CCCCTCCCTCTATGTAACGATT 58.760 50.000 0.00 0.00 0.00 3.34
204 205 3.258622 CCCCTCCCTCTATGTAACGATTC 59.741 52.174 0.00 0.00 0.00 2.52
205 206 4.153411 CCCTCCCTCTATGTAACGATTCT 58.847 47.826 0.00 0.00 0.00 2.40
206 207 4.218852 CCCTCCCTCTATGTAACGATTCTC 59.781 50.000 0.00 0.00 0.00 2.87
207 208 5.074115 CCTCCCTCTATGTAACGATTCTCT 58.926 45.833 0.00 0.00 0.00 3.10
208 209 5.536916 CCTCCCTCTATGTAACGATTCTCTT 59.463 44.000 0.00 0.00 0.00 2.85
209 210 6.041069 CCTCCCTCTATGTAACGATTCTCTTT 59.959 42.308 0.00 0.00 0.00 2.52
210 211 6.806751 TCCCTCTATGTAACGATTCTCTTTG 58.193 40.000 0.00 0.00 0.00 2.77
211 212 6.380274 TCCCTCTATGTAACGATTCTCTTTGT 59.620 38.462 0.00 0.00 0.00 2.83
212 213 7.558807 TCCCTCTATGTAACGATTCTCTTTGTA 59.441 37.037 0.00 0.00 0.00 2.41
213 214 8.361139 CCCTCTATGTAACGATTCTCTTTGTAT 58.639 37.037 0.00 0.00 0.00 2.29
214 215 9.751542 CCTCTATGTAACGATTCTCTTTGTATT 57.248 33.333 0.00 0.00 0.00 1.89
219 220 8.827177 TGTAACGATTCTCTTTGTATTGTTCT 57.173 30.769 0.00 0.00 33.76 3.01
220 221 9.917129 TGTAACGATTCTCTTTGTATTGTTCTA 57.083 29.630 0.00 0.00 33.76 2.10
224 225 9.877178 ACGATTCTCTTTGTATTGTTCTATTCT 57.123 29.630 0.00 0.00 0.00 2.40
290 291 4.519540 AAAAAGATATTGCAAGCCGTGT 57.480 36.364 4.94 0.00 0.00 4.49
291 292 3.764885 AAAGATATTGCAAGCCGTGTC 57.235 42.857 4.94 0.00 0.00 3.67
292 293 1.290203 AGATATTGCAAGCCGTGTCG 58.710 50.000 4.94 0.00 0.00 4.35
293 294 1.006832 GATATTGCAAGCCGTGTCGT 58.993 50.000 4.94 0.00 0.00 4.34
294 295 0.726827 ATATTGCAAGCCGTGTCGTG 59.273 50.000 4.94 0.00 0.00 4.35
295 296 1.906994 TATTGCAAGCCGTGTCGTGC 61.907 55.000 4.94 0.00 40.91 5.34
303 304 4.337060 CGTGTCGTGCCGAGGACA 62.337 66.667 0.00 0.00 43.13 4.02
304 305 2.028484 GTGTCGTGCCGAGGACAA 59.972 61.111 1.60 0.00 45.93 3.18
305 306 2.028484 TGTCGTGCCGAGGACAAC 59.972 61.111 0.00 0.00 42.56 3.32
306 307 3.103911 GTCGTGCCGAGGACAACG 61.104 66.667 0.00 0.00 36.23 4.10
310 311 3.235481 TGCCGAGGACAACGGGAA 61.235 61.111 0.00 0.00 46.94 3.97
311 312 3.524648 TGCCGAGGACAACGGGAAC 62.525 63.158 0.00 0.00 46.94 3.62
312 313 3.057337 CCGAGGACAACGGGAACT 58.943 61.111 0.00 0.00 45.65 3.01
313 314 2.269978 CCGAGGACAACGGGAACTA 58.730 57.895 0.00 0.00 45.65 2.24
314 315 0.108945 CCGAGGACAACGGGAACTAC 60.109 60.000 0.00 0.00 45.65 2.73
315 316 0.886563 CGAGGACAACGGGAACTACT 59.113 55.000 0.00 0.00 0.00 2.57
316 317 2.086869 CGAGGACAACGGGAACTACTA 58.913 52.381 0.00 0.00 0.00 1.82
317 318 2.159462 CGAGGACAACGGGAACTACTAC 60.159 54.545 0.00 0.00 0.00 2.73
318 319 2.165234 GAGGACAACGGGAACTACTACC 59.835 54.545 0.00 0.00 0.00 3.18
319 320 2.174360 GGACAACGGGAACTACTACCT 58.826 52.381 0.00 0.00 0.00 3.08
320 321 2.165234 GGACAACGGGAACTACTACCTC 59.835 54.545 0.00 0.00 0.00 3.85
321 322 2.165234 GACAACGGGAACTACTACCTCC 59.835 54.545 0.00 0.00 0.00 4.30
322 323 1.133790 CAACGGGAACTACTACCTCCG 59.866 57.143 0.00 0.00 42.69 4.63
323 324 0.329596 ACGGGAACTACTACCTCCGT 59.670 55.000 0.00 0.00 44.72 4.69
324 325 1.272147 ACGGGAACTACTACCTCCGTT 60.272 52.381 0.00 0.00 46.97 4.44
325 326 1.403323 CGGGAACTACTACCTCCGTTC 59.597 57.143 0.00 0.00 36.06 3.95
329 330 4.525912 GAACTACTACCTCCGTTCCAAA 57.474 45.455 0.00 0.00 31.89 3.28
330 331 4.886579 GAACTACTACCTCCGTTCCAAAA 58.113 43.478 0.00 0.00 31.89 2.44
331 332 5.485620 GAACTACTACCTCCGTTCCAAAAT 58.514 41.667 0.00 0.00 31.89 1.82
332 333 6.610075 AACTACTACCTCCGTTCCAAAATA 57.390 37.500 0.00 0.00 0.00 1.40
333 334 6.803366 ACTACTACCTCCGTTCCAAAATAT 57.197 37.500 0.00 0.00 0.00 1.28
334 335 7.902920 ACTACTACCTCCGTTCCAAAATATA 57.097 36.000 0.00 0.00 0.00 0.86
335 336 7.720442 ACTACTACCTCCGTTCCAAAATATAC 58.280 38.462 0.00 0.00 0.00 1.47
336 337 6.803366 ACTACCTCCGTTCCAAAATATACT 57.197 37.500 0.00 0.00 0.00 2.12
337 338 7.902920 ACTACCTCCGTTCCAAAATATACTA 57.097 36.000 0.00 0.00 0.00 1.82
338 339 8.310122 ACTACCTCCGTTCCAAAATATACTAA 57.690 34.615 0.00 0.00 0.00 2.24
339 340 8.931568 ACTACCTCCGTTCCAAAATATACTAAT 58.068 33.333 0.00 0.00 0.00 1.73
340 341 9.420551 CTACCTCCGTTCCAAAATATACTAATC 57.579 37.037 0.00 0.00 0.00 1.75
341 342 8.030913 ACCTCCGTTCCAAAATATACTAATCT 57.969 34.615 0.00 0.00 0.00 2.40
342 343 9.151177 ACCTCCGTTCCAAAATATACTAATCTA 57.849 33.333 0.00 0.00 0.00 1.98
363 364 9.908152 AATCTATCAAAACGTCATATATCACGA 57.092 29.630 16.46 0.00 39.38 4.35
364 365 8.723777 TCTATCAAAACGTCATATATCACGAC 57.276 34.615 16.46 4.03 39.38 4.34
365 366 8.347035 TCTATCAAAACGTCATATATCACGACA 58.653 33.333 16.46 0.00 39.38 4.35
366 367 7.764695 ATCAAAACGTCATATATCACGACAA 57.235 32.000 16.46 0.00 39.38 3.18
367 368 7.216920 TCAAAACGTCATATATCACGACAAG 57.783 36.000 16.46 3.53 39.38 3.16
368 369 6.254804 TCAAAACGTCATATATCACGACAAGG 59.745 38.462 16.46 1.84 39.38 3.61
369 370 5.509716 AACGTCATATATCACGACAAGGA 57.490 39.130 16.46 0.00 39.38 3.36
370 371 5.707242 ACGTCATATATCACGACAAGGAT 57.293 39.130 16.46 0.00 39.38 3.24
371 372 6.812879 ACGTCATATATCACGACAAGGATA 57.187 37.500 16.46 0.00 39.38 2.59
372 373 7.210718 ACGTCATATATCACGACAAGGATAA 57.789 36.000 16.46 0.00 39.38 1.75
373 374 7.654568 ACGTCATATATCACGACAAGGATAAA 58.345 34.615 16.46 0.00 39.38 1.40
374 375 7.808381 ACGTCATATATCACGACAAGGATAAAG 59.192 37.037 16.46 0.00 39.38 1.85
375 376 7.273598 CGTCATATATCACGACAAGGATAAAGG 59.726 40.741 2.59 0.00 38.32 3.11
376 377 8.304596 GTCATATATCACGACAAGGATAAAGGA 58.695 37.037 0.00 0.00 30.43 3.36
377 378 8.866093 TCATATATCACGACAAGGATAAAGGAA 58.134 33.333 0.00 0.00 30.43 3.36
378 379 9.489084 CATATATCACGACAAGGATAAAGGAAA 57.511 33.333 0.00 0.00 30.43 3.13
379 380 7.787725 ATATCACGACAAGGATAAAGGAAAC 57.212 36.000 0.00 0.00 30.43 2.78
381 382 6.349243 TCACGACAAGGATAAAGGAAACTA 57.651 37.500 0.00 0.00 42.68 2.24
382 383 6.161381 TCACGACAAGGATAAAGGAAACTAC 58.839 40.000 0.00 0.00 42.68 2.73
383 384 6.014840 TCACGACAAGGATAAAGGAAACTACT 60.015 38.462 0.00 0.00 42.68 2.57
384 385 7.177216 TCACGACAAGGATAAAGGAAACTACTA 59.823 37.037 0.00 0.00 42.68 1.82
385 386 7.275123 CACGACAAGGATAAAGGAAACTACTAC 59.725 40.741 0.00 0.00 42.68 2.73
386 387 6.755607 CGACAAGGATAAAGGAAACTACTACC 59.244 42.308 0.00 0.00 42.68 3.18
387 388 7.363617 CGACAAGGATAAAGGAAACTACTACCT 60.364 40.741 0.00 0.00 42.68 3.08
388 389 7.849160 ACAAGGATAAAGGAAACTACTACCTC 58.151 38.462 0.00 0.00 42.68 3.85
389 390 7.092979 ACAAGGATAAAGGAAACTACTACCTCC 60.093 40.741 0.00 0.00 42.68 4.30
390 391 5.597594 AGGATAAAGGAAACTACTACCTCCG 59.402 44.000 0.00 0.00 42.68 4.63
391 392 5.362143 GGATAAAGGAAACTACTACCTCCGT 59.638 44.000 0.00 0.00 42.68 4.69
392 393 6.127225 GGATAAAGGAAACTACTACCTCCGTT 60.127 42.308 0.00 0.00 42.68 4.44
393 394 4.797800 AAGGAAACTACTACCTCCGTTC 57.202 45.455 0.00 0.00 42.68 3.95
394 395 4.044946 AGGAAACTACTACCTCCGTTCT 57.955 45.455 0.00 0.00 40.61 3.01
395 396 5.184892 AGGAAACTACTACCTCCGTTCTA 57.815 43.478 0.00 0.00 40.61 2.10
396 397 5.574188 AGGAAACTACTACCTCCGTTCTAA 58.426 41.667 0.00 0.00 40.61 2.10
397 398 6.012745 AGGAAACTACTACCTCCGTTCTAAA 58.987 40.000 0.00 0.00 40.61 1.85
398 399 6.494835 AGGAAACTACTACCTCCGTTCTAAAA 59.505 38.462 0.00 0.00 40.61 1.52
399 400 7.179872 AGGAAACTACTACCTCCGTTCTAAAAT 59.820 37.037 0.00 0.00 40.61 1.82
400 401 8.470002 GGAAACTACTACCTCCGTTCTAAAATA 58.530 37.037 0.00 0.00 0.00 1.40
404 405 9.859152 ACTACTACCTCCGTTCTAAAATATACT 57.141 33.333 0.00 0.00 0.00 2.12
407 408 8.791675 ACTACCTCCGTTCTAAAATATACTAGC 58.208 37.037 0.00 0.00 0.00 3.42
408 409 6.990798 ACCTCCGTTCTAAAATATACTAGCC 58.009 40.000 0.00 0.00 0.00 3.93
409 410 6.781507 ACCTCCGTTCTAAAATATACTAGCCT 59.218 38.462 0.00 0.00 0.00 4.58
410 411 7.946776 ACCTCCGTTCTAAAATATACTAGCCTA 59.053 37.037 0.00 0.00 0.00 3.93
411 412 8.968969 CCTCCGTTCTAAAATATACTAGCCTAT 58.031 37.037 0.00 0.00 0.00 2.57
413 414 9.524496 TCCGTTCTAAAATATACTAGCCTATCA 57.476 33.333 0.00 0.00 0.00 2.15
418 419 9.856488 TCTAAAATATACTAGCCTATCAAAGCG 57.144 33.333 0.00 0.00 0.00 4.68
419 420 9.640963 CTAAAATATACTAGCCTATCAAAGCGT 57.359 33.333 0.00 0.00 0.00 5.07
420 421 8.535690 AAAATATACTAGCCTATCAAAGCGTC 57.464 34.615 0.00 0.00 0.00 5.19
421 422 6.835819 ATATACTAGCCTATCAAAGCGTCA 57.164 37.500 0.00 0.00 0.00 4.35
422 423 5.730296 ATACTAGCCTATCAAAGCGTCAT 57.270 39.130 0.00 0.00 0.00 3.06
423 424 6.835819 ATACTAGCCTATCAAAGCGTCATA 57.164 37.500 0.00 0.00 0.00 2.15
424 425 5.730296 ACTAGCCTATCAAAGCGTCATAT 57.270 39.130 0.00 0.00 0.00 1.78
425 426 6.835819 ACTAGCCTATCAAAGCGTCATATA 57.164 37.500 0.00 0.00 0.00 0.86
426 427 7.411486 ACTAGCCTATCAAAGCGTCATATAT 57.589 36.000 0.00 0.00 0.00 0.86
427 428 7.841956 ACTAGCCTATCAAAGCGTCATATATT 58.158 34.615 0.00 0.00 0.00 1.28
428 429 8.314751 ACTAGCCTATCAAAGCGTCATATATTT 58.685 33.333 0.00 0.00 0.00 1.40
429 430 7.986085 AGCCTATCAAAGCGTCATATATTTT 57.014 32.000 0.00 0.00 0.00 1.82
431 432 9.502091 AGCCTATCAAAGCGTCATATATTTTAA 57.498 29.630 0.00 0.00 0.00 1.52
436 437 8.829514 TCAAAGCGTCATATATTTTAAAACGG 57.170 30.769 1.97 0.00 0.00 4.44
437 438 8.666573 TCAAAGCGTCATATATTTTAAAACGGA 58.333 29.630 1.97 0.00 0.00 4.69
438 439 9.445786 CAAAGCGTCATATATTTTAAAACGGAT 57.554 29.630 1.97 0.41 0.00 4.18
439 440 9.445786 AAAGCGTCATATATTTTAAAACGGATG 57.554 29.630 1.97 7.04 0.00 3.51
440 441 7.075741 AGCGTCATATATTTTAAAACGGATGC 58.924 34.615 17.03 17.03 35.57 3.91
441 442 6.853872 GCGTCATATATTTTAAAACGGATGCA 59.146 34.615 18.47 0.00 35.46 3.96
442 443 7.059488 GCGTCATATATTTTAAAACGGATGCAG 59.941 37.037 18.47 12.82 35.46 4.41
443 444 8.067784 CGTCATATATTTTAAAACGGATGCAGT 58.932 33.333 1.97 0.00 0.00 4.40
444 445 9.169468 GTCATATATTTTAAAACGGATGCAGTG 57.831 33.333 1.97 0.00 0.00 3.66
445 446 9.114952 TCATATATTTTAAAACGGATGCAGTGA 57.885 29.630 1.97 0.00 0.00 3.41
446 447 9.729023 CATATATTTTAAAACGGATGCAGTGAA 57.271 29.630 1.97 0.00 0.00 3.18
448 449 8.687824 ATATTTTAAAACGGATGCAGTGAAAG 57.312 30.769 1.97 0.00 0.00 2.62
449 450 5.759506 TTTAAAACGGATGCAGTGAAAGA 57.240 34.783 0.00 0.00 0.00 2.52
450 451 5.957842 TTAAAACGGATGCAGTGAAAGAT 57.042 34.783 0.00 0.00 0.00 2.40
451 452 7.441890 TTTAAAACGGATGCAGTGAAAGATA 57.558 32.000 0.00 0.00 0.00 1.98
452 453 4.946784 AAACGGATGCAGTGAAAGATAC 57.053 40.909 0.00 0.00 0.00 2.24
453 454 3.895232 ACGGATGCAGTGAAAGATACT 57.105 42.857 0.00 0.00 0.00 2.12
454 455 3.786635 ACGGATGCAGTGAAAGATACTC 58.213 45.455 0.00 0.00 0.00 2.59
455 456 3.126831 CGGATGCAGTGAAAGATACTCC 58.873 50.000 0.00 0.00 0.00 3.85
456 457 3.471680 GGATGCAGTGAAAGATACTCCC 58.528 50.000 0.00 0.00 0.00 4.30
457 458 3.135530 GGATGCAGTGAAAGATACTCCCT 59.864 47.826 0.00 0.00 0.00 4.20
458 459 3.895232 TGCAGTGAAAGATACTCCCTC 57.105 47.619 0.00 0.00 0.00 4.30
459 460 2.501723 TGCAGTGAAAGATACTCCCTCC 59.498 50.000 0.00 0.00 0.00 4.30
460 461 2.482142 GCAGTGAAAGATACTCCCTCCG 60.482 54.545 0.00 0.00 0.00 4.63
461 462 2.761208 CAGTGAAAGATACTCCCTCCGT 59.239 50.000 0.00 0.00 0.00 4.69
462 463 3.952323 CAGTGAAAGATACTCCCTCCGTA 59.048 47.826 0.00 0.00 0.00 4.02
463 464 4.401519 CAGTGAAAGATACTCCCTCCGTAA 59.598 45.833 0.00 0.00 0.00 3.18
464 465 5.021458 AGTGAAAGATACTCCCTCCGTAAA 58.979 41.667 0.00 0.00 0.00 2.01
465 466 5.127356 AGTGAAAGATACTCCCTCCGTAAAG 59.873 44.000 0.00 0.00 0.00 1.85
466 467 5.126707 GTGAAAGATACTCCCTCCGTAAAGA 59.873 44.000 0.00 0.00 0.00 2.52
467 468 5.718130 TGAAAGATACTCCCTCCGTAAAGAA 59.282 40.000 0.00 0.00 0.00 2.52
468 469 6.211986 TGAAAGATACTCCCTCCGTAAAGAAA 59.788 38.462 0.00 0.00 0.00 2.52
469 470 6.809976 AAGATACTCCCTCCGTAAAGAAAT 57.190 37.500 0.00 0.00 0.00 2.17
470 471 7.909485 AAGATACTCCCTCCGTAAAGAAATA 57.091 36.000 0.00 0.00 0.00 1.40
471 472 8.493787 AAGATACTCCCTCCGTAAAGAAATAT 57.506 34.615 0.00 0.00 0.00 1.28
472 473 9.597681 AAGATACTCCCTCCGTAAAGAAATATA 57.402 33.333 0.00 0.00 0.00 0.86
473 474 9.245481 AGATACTCCCTCCGTAAAGAAATATAG 57.755 37.037 0.00 0.00 0.00 1.31
474 475 9.240734 GATACTCCCTCCGTAAAGAAATATAGA 57.759 37.037 0.00 0.00 0.00 1.98
475 476 7.909485 ACTCCCTCCGTAAAGAAATATAGAA 57.091 36.000 0.00 0.00 0.00 2.10
476 477 7.953752 ACTCCCTCCGTAAAGAAATATAGAAG 58.046 38.462 0.00 0.00 0.00 2.85
477 478 6.756221 TCCCTCCGTAAAGAAATATAGAAGC 58.244 40.000 0.00 0.00 0.00 3.86
478 479 5.634020 CCCTCCGTAAAGAAATATAGAAGCG 59.366 44.000 0.00 0.00 0.00 4.68
479 480 6.214399 CCTCCGTAAAGAAATATAGAAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
480 481 6.700520 CCTCCGTAAAGAAATATAGAAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
481 482 7.224167 CCTCCGTAAAGAAATATAGAAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
482 483 9.241317 CTCCGTAAAGAAATATAGAAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
483 484 9.241317 TCCGTAAAGAAATATAGAAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
484 485 9.241317 CCGTAAAGAAATATAGAAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
498 499 9.570488 AGAAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
499 500 9.565213 GAAGCGTTTAGATTACTAAAGTAGTGA 57.435 33.333 0.00 0.00 45.42 3.41
500 501 8.908172 AGCGTTTAGATTACTAAAGTAGTGAC 57.092 34.615 0.00 0.00 45.42 3.67
501 502 7.972832 AGCGTTTAGATTACTAAAGTAGTGACC 59.027 37.037 0.00 0.00 45.42 4.02
502 503 7.972832 GCGTTTAGATTACTAAAGTAGTGACCT 59.027 37.037 0.00 0.00 45.42 3.85
508 509 7.972832 AGATTACTAAAGTAGTGACCTAAACGC 59.027 37.037 0.00 0.00 39.81 4.84
509 510 5.718724 ACTAAAGTAGTGACCTAAACGCT 57.281 39.130 0.00 0.00 37.69 5.07
510 511 6.094193 ACTAAAGTAGTGACCTAAACGCTT 57.906 37.500 0.00 0.00 37.69 4.68
511 512 6.519382 ACTAAAGTAGTGACCTAAACGCTTT 58.481 36.000 0.00 0.00 37.69 3.51
512 513 6.988580 ACTAAAGTAGTGACCTAAACGCTTTT 59.011 34.615 0.00 0.00 37.69 2.27
513 514 8.143835 ACTAAAGTAGTGACCTAAACGCTTTTA 58.856 33.333 0.00 0.00 37.69 1.52
514 515 6.775939 AAGTAGTGACCTAAACGCTTTTAC 57.224 37.500 0.00 0.00 0.00 2.01
515 516 6.094193 AGTAGTGACCTAAACGCTTTTACT 57.906 37.500 0.00 0.00 0.00 2.24
516 517 6.155136 AGTAGTGACCTAAACGCTTTTACTC 58.845 40.000 0.00 0.00 0.00 2.59
517 518 4.313282 AGTGACCTAAACGCTTTTACTCC 58.687 43.478 0.00 0.00 0.00 3.85
518 519 3.434641 GTGACCTAAACGCTTTTACTCCC 59.565 47.826 0.00 0.00 0.00 4.30
519 520 3.325716 TGACCTAAACGCTTTTACTCCCT 59.674 43.478 0.00 0.00 0.00 4.20
520 521 3.931468 GACCTAAACGCTTTTACTCCCTC 59.069 47.826 0.00 0.00 0.00 4.30
521 522 3.268330 CCTAAACGCTTTTACTCCCTCC 58.732 50.000 0.00 0.00 0.00 4.30
522 523 1.804601 AAACGCTTTTACTCCCTCCG 58.195 50.000 0.00 0.00 0.00 4.63
523 524 0.683412 AACGCTTTTACTCCCTCCGT 59.317 50.000 0.00 0.00 0.00 4.69
524 525 0.245813 ACGCTTTTACTCCCTCCGTC 59.754 55.000 0.00 0.00 0.00 4.79
525 526 0.459759 CGCTTTTACTCCCTCCGTCC 60.460 60.000 0.00 0.00 0.00 4.79
526 527 0.459759 GCTTTTACTCCCTCCGTCCG 60.460 60.000 0.00 0.00 0.00 4.79
527 528 0.459759 CTTTTACTCCCTCCGTCCGC 60.460 60.000 0.00 0.00 0.00 5.54
528 529 2.216750 TTTTACTCCCTCCGTCCGCG 62.217 60.000 0.00 0.00 37.95 6.46
529 530 3.626996 TTACTCCCTCCGTCCGCGA 62.627 63.158 8.23 0.00 41.33 5.87
530 531 3.626996 TACTCCCTCCGTCCGCGAA 62.627 63.158 8.23 0.00 41.33 4.70
531 532 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
532 533 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
533 534 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
534 535 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
535 536 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
536 537 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
537 538 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
538 539 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
539 540 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
540 541 1.467883 CCGTCCGCGAATAAGTGTACA 60.468 52.381 8.23 0.00 41.33 2.90
541 542 2.456989 CGTCCGCGAATAAGTGTACAT 58.543 47.619 8.23 0.00 41.33 2.29
542 543 2.466571 CGTCCGCGAATAAGTGTACATC 59.533 50.000 8.23 0.00 41.33 3.06
543 544 3.703420 GTCCGCGAATAAGTGTACATCT 58.297 45.455 8.23 0.00 0.00 2.90
544 545 4.553351 CGTCCGCGAATAAGTGTACATCTA 60.553 45.833 8.23 0.00 41.33 1.98
545 546 4.910456 GTCCGCGAATAAGTGTACATCTAG 59.090 45.833 8.23 0.00 0.00 2.43
546 547 4.577693 TCCGCGAATAAGTGTACATCTAGT 59.422 41.667 8.23 0.00 0.00 2.57
547 548 5.066893 TCCGCGAATAAGTGTACATCTAGTT 59.933 40.000 8.23 0.00 0.00 2.24
548 549 5.747197 CCGCGAATAAGTGTACATCTAGTTT 59.253 40.000 8.23 0.00 0.00 2.66
549 550 6.255020 CCGCGAATAAGTGTACATCTAGTTTT 59.745 38.462 8.23 0.00 0.00 2.43
550 551 7.201496 CCGCGAATAAGTGTACATCTAGTTTTT 60.201 37.037 8.23 0.00 0.00 1.94
551 552 7.630987 CGCGAATAAGTGTACATCTAGTTTTTG 59.369 37.037 0.00 0.00 0.00 2.44
552 553 8.440833 GCGAATAAGTGTACATCTAGTTTTTGT 58.559 33.333 0.00 0.00 0.00 2.83
553 554 9.953825 CGAATAAGTGTACATCTAGTTTTTGTC 57.046 33.333 0.00 0.00 0.00 3.18
558 559 9.490379 AAGTGTACATCTAGTTTTTGTCCTAAG 57.510 33.333 0.00 0.00 0.00 2.18
559 560 8.648693 AGTGTACATCTAGTTTTTGTCCTAAGT 58.351 33.333 0.00 0.00 0.00 2.24
560 561 8.923683 GTGTACATCTAGTTTTTGTCCTAAGTC 58.076 37.037 0.00 0.00 0.00 3.01
561 562 8.644216 TGTACATCTAGTTTTTGTCCTAAGTCA 58.356 33.333 0.00 0.00 0.00 3.41
562 563 9.485206 GTACATCTAGTTTTTGTCCTAAGTCAA 57.515 33.333 0.00 0.00 0.00 3.18
563 564 8.974060 ACATCTAGTTTTTGTCCTAAGTCAAA 57.026 30.769 0.00 0.00 30.64 2.69
564 565 9.057089 ACATCTAGTTTTTGTCCTAAGTCAAAG 57.943 33.333 0.00 0.00 33.54 2.77
565 566 9.057089 CATCTAGTTTTTGTCCTAAGTCAAAGT 57.943 33.333 0.00 0.00 33.54 2.66
566 567 9.628500 ATCTAGTTTTTGTCCTAAGTCAAAGTT 57.372 29.630 0.00 0.00 33.54 2.66
567 568 9.457436 TCTAGTTTTTGTCCTAAGTCAAAGTTT 57.543 29.630 0.00 0.00 33.54 2.66
616 617 5.982890 AAAGTAACAGCATTTATGGCACT 57.017 34.783 0.00 0.00 0.00 4.40
617 618 7.461182 AAAAGTAACAGCATTTATGGCACTA 57.539 32.000 0.00 0.00 0.00 2.74
618 619 7.461182 AAAGTAACAGCATTTATGGCACTAA 57.539 32.000 0.00 0.00 0.00 2.24
619 620 7.461182 AAGTAACAGCATTTATGGCACTAAA 57.539 32.000 0.00 0.00 0.00 1.85
620 621 7.645058 AGTAACAGCATTTATGGCACTAAAT 57.355 32.000 0.00 0.00 32.76 1.40
621 622 8.066612 AGTAACAGCATTTATGGCACTAAATT 57.933 30.769 10.31 3.26 30.68 1.82
622 623 9.184523 AGTAACAGCATTTATGGCACTAAATTA 57.815 29.630 10.31 2.61 30.68 1.40
623 624 9.450807 GTAACAGCATTTATGGCACTAAATTAG 57.549 33.333 0.00 0.00 30.68 1.73
624 625 7.645058 ACAGCATTTATGGCACTAAATTAGT 57.355 32.000 0.00 0.00 40.28 2.24
625 626 8.746052 ACAGCATTTATGGCACTAAATTAGTA 57.254 30.769 5.23 0.00 37.23 1.82
626 627 9.354673 ACAGCATTTATGGCACTAAATTAGTAT 57.645 29.630 5.23 0.00 37.23 2.12
627 628 9.831737 CAGCATTTATGGCACTAAATTAGTATC 57.168 33.333 5.23 2.20 37.23 2.24
628 629 9.573166 AGCATTTATGGCACTAAATTAGTATCA 57.427 29.630 5.23 7.55 37.23 2.15
629 630 9.612620 GCATTTATGGCACTAAATTAGTATCAC 57.387 33.333 5.23 0.00 37.23 3.06
636 637 9.982651 TGGCACTAAATTAGTATCACTAGATTC 57.017 33.333 5.23 0.00 37.23 2.52
637 638 9.130312 GGCACTAAATTAGTATCACTAGATTCG 57.870 37.037 5.23 0.00 37.23 3.34
638 639 9.680315 GCACTAAATTAGTATCACTAGATTCGT 57.320 33.333 5.23 0.00 37.23 3.85
648 649 9.436957 AGTATCACTAGATTCGTTTTGAAATGT 57.563 29.630 0.00 0.00 40.71 2.71
710 711 8.084590 ACTACTCTTTTCTACAAAATTGGTCG 57.915 34.615 0.00 0.00 30.91 4.79
711 712 7.929785 ACTACTCTTTTCTACAAAATTGGTCGA 59.070 33.333 0.00 0.00 30.91 4.20
712 713 7.562454 ACTCTTTTCTACAAAATTGGTCGAA 57.438 32.000 0.00 0.00 30.91 3.71
713 714 7.639945 ACTCTTTTCTACAAAATTGGTCGAAG 58.360 34.615 0.00 0.00 30.91 3.79
714 715 7.282450 ACTCTTTTCTACAAAATTGGTCGAAGT 59.718 33.333 0.00 0.00 30.91 3.01
715 716 7.992008 TCTTTTCTACAAAATTGGTCGAAGTT 58.008 30.769 0.00 0.00 30.91 2.66
716 717 9.111613 TCTTTTCTACAAAATTGGTCGAAGTTA 57.888 29.630 0.00 0.00 30.91 2.24
717 718 9.893305 CTTTTCTACAAAATTGGTCGAAGTTAT 57.107 29.630 0.00 0.00 30.91 1.89
745 746 8.974060 AACTTTGACTTAGAACAAATGGTAGA 57.026 30.769 8.83 0.00 35.84 2.59
746 747 8.974060 ACTTTGACTTAGAACAAATGGTAGAA 57.026 30.769 8.83 0.00 35.84 2.10
747 748 9.057089 ACTTTGACTTAGAACAAATGGTAGAAG 57.943 33.333 8.83 0.00 35.84 2.85
748 749 8.974060 TTTGACTTAGAACAAATGGTAGAAGT 57.026 30.769 0.00 0.00 32.26 3.01
750 751 9.485206 TTGACTTAGAACAAATGGTAGAAGTAC 57.515 33.333 0.00 0.00 30.38 2.73
751 752 8.644216 TGACTTAGAACAAATGGTAGAAGTACA 58.356 33.333 0.00 0.00 30.38 2.90
752 753 8.828688 ACTTAGAACAAATGGTAGAAGTACAC 57.171 34.615 0.00 0.00 29.17 2.90
753 754 8.648693 ACTTAGAACAAATGGTAGAAGTACACT 58.351 33.333 0.00 0.00 29.17 3.55
754 755 9.141400 CTTAGAACAAATGGTAGAAGTACACTC 57.859 37.037 0.00 0.00 0.00 3.51
755 756 6.157211 AGAACAAATGGTAGAAGTACACTCG 58.843 40.000 0.00 0.00 0.00 4.18
756 757 4.243270 ACAAATGGTAGAAGTACACTCGC 58.757 43.478 0.00 0.00 0.00 5.03
757 758 2.846039 ATGGTAGAAGTACACTCGCG 57.154 50.000 0.00 0.00 0.00 5.87
758 759 0.806868 TGGTAGAAGTACACTCGCGG 59.193 55.000 6.13 0.00 0.00 6.46
759 760 1.089920 GGTAGAAGTACACTCGCGGA 58.910 55.000 6.13 0.00 0.00 5.54
760 761 1.202121 GGTAGAAGTACACTCGCGGAC 60.202 57.143 6.13 0.00 0.00 4.79
761 762 0.723414 TAGAAGTACACTCGCGGACG 59.277 55.000 6.13 0.00 42.01 4.79
762 763 1.513586 GAAGTACACTCGCGGACGG 60.514 63.158 6.13 0.00 40.63 4.79
763 764 1.915614 GAAGTACACTCGCGGACGGA 61.916 60.000 6.13 0.00 40.63 4.69
764 765 1.919956 AAGTACACTCGCGGACGGAG 61.920 60.000 6.13 0.00 40.63 4.63
765 766 3.129502 TACACTCGCGGACGGAGG 61.130 66.667 6.13 0.00 40.63 4.30
770 771 4.100084 TCGCGGACGGAGGGAGTA 62.100 66.667 6.13 0.00 40.63 2.59
771 772 2.905880 CGCGGACGGAGGGAGTAT 60.906 66.667 0.00 0.00 34.97 2.12
772 773 1.598962 CGCGGACGGAGGGAGTATA 60.599 63.158 0.00 0.00 34.97 1.47
773 774 0.959372 CGCGGACGGAGGGAGTATAT 60.959 60.000 0.00 0.00 34.97 0.86
774 775 1.254954 GCGGACGGAGGGAGTATATT 58.745 55.000 0.00 0.00 0.00 1.28
775 776 1.617357 GCGGACGGAGGGAGTATATTT 59.383 52.381 0.00 0.00 0.00 1.40
776 777 2.036862 GCGGACGGAGGGAGTATATTTT 59.963 50.000 0.00 0.00 0.00 1.82
777 778 3.493873 GCGGACGGAGGGAGTATATTTTT 60.494 47.826 0.00 0.00 0.00 1.94
834 835 1.380785 AGGGCCACAATGCATGGAG 60.381 57.895 8.45 0.00 39.87 3.86
1017 1019 1.077501 CATGTCAGGCAATCCCGGT 60.078 57.895 0.00 0.00 39.21 5.28
1180 1182 0.104120 TATCGATGCGGGGACAAGTG 59.896 55.000 8.54 0.00 0.00 3.16
1189 1191 2.038837 GGGACAAGTGCTAACGCCC 61.039 63.158 0.00 0.00 34.43 6.13
1227 1229 0.589229 GATCGTACCTCAGCGACACG 60.589 60.000 0.00 0.00 40.03 4.49
1270 1272 3.887339 TTTGTTTCGATCGAATGTGCA 57.113 38.095 29.53 21.41 33.79 4.57
1338 1340 6.980051 ATTTCTCGTGTGGTAGGTATTTTC 57.020 37.500 0.00 0.00 0.00 2.29
1348 1350 7.281549 GTGTGGTAGGTATTTTCCAATTCGTAT 59.718 37.037 0.00 0.00 0.00 3.06
1349 1351 8.484575 TGTGGTAGGTATTTTCCAATTCGTATA 58.515 33.333 0.00 0.00 0.00 1.47
1384 1386 9.125026 CAGCTTTAAGAGTTATGGGTATCATTT 57.875 33.333 0.00 0.00 37.30 2.32
1418 1420 6.035005 CCTCGAATGACATGTAGTTGTAGTTG 59.965 42.308 0.00 0.00 0.00 3.16
1419 1421 6.452242 TCGAATGACATGTAGTTGTAGTTGT 58.548 36.000 0.00 0.00 0.00 3.32
1420 1422 7.595604 TCGAATGACATGTAGTTGTAGTTGTA 58.404 34.615 0.00 0.00 0.00 2.41
1421 1423 7.753580 TCGAATGACATGTAGTTGTAGTTGTAG 59.246 37.037 0.00 0.00 0.00 2.74
1422 1424 7.541091 CGAATGACATGTAGTTGTAGTTGTAGT 59.459 37.037 0.00 0.00 0.00 2.73
1423 1425 9.204570 GAATGACATGTAGTTGTAGTTGTAGTT 57.795 33.333 0.00 0.00 0.00 2.24
1465 1467 6.203723 GCTACCCTATCTGTGTTCATCAAATC 59.796 42.308 0.00 0.00 0.00 2.17
1479 1481 6.964807 TCATCAAATCATTGGGGATTACAG 57.035 37.500 0.00 0.00 36.51 2.74
1565 1567 1.437625 TCGATCAATGCGCTGTTTCA 58.562 45.000 9.73 0.00 0.00 2.69
1619 1621 1.895020 ATGAAAGGCTGACCCGCGTA 61.895 55.000 4.92 0.00 39.21 4.42
1657 1659 3.372206 CCAGTAATTCTTCAAGGTCAGCG 59.628 47.826 0.00 0.00 0.00 5.18
1812 1828 0.662619 CTTTCGCCTTCAGCACAACA 59.337 50.000 0.00 0.00 44.04 3.33
1917 1933 3.531538 TCTTATTGTTAGCTTCCAGCCG 58.468 45.455 0.00 0.00 43.77 5.52
2105 2139 1.469703 CAAAGAAGCATGCGATCCACA 59.530 47.619 18.99 0.00 0.00 4.17
2280 2314 3.007635 CCGGATTAAAGGTGTGAAGGTC 58.992 50.000 0.00 0.00 0.00 3.85
2332 2366 6.370186 TGGATATGGGATTCAGAAGAGATG 57.630 41.667 0.00 0.00 0.00 2.90
2967 3002 4.841422 AGATTCATTCCAGGAAGTCACAG 58.159 43.478 8.20 0.00 0.00 3.66
3130 3166 7.687941 ATCCAAAGAACTTGTATAAGGTGTG 57.312 36.000 4.12 0.00 38.26 3.82
3710 3768 4.023291 GGAAGATGGGCCTTCAAAATGTA 58.977 43.478 20.31 0.00 43.19 2.29
3728 3786 0.617820 TACCTGGGCTGAGGTCTTCC 60.618 60.000 11.38 0.00 43.33 3.46
3930 3990 2.222886 TGTTGTCCGGTGTGGTATTTG 58.777 47.619 0.00 0.00 39.52 2.32
3952 4012 3.802685 GTGAACCTTAACTATAGCGCTGG 59.197 47.826 22.90 12.70 0.00 4.85
3957 4017 3.825014 CCTTAACTATAGCGCTGGTCCTA 59.175 47.826 22.90 0.00 0.00 2.94
3967 4027 2.541556 CGCTGGTCCTAAGCTACTTTC 58.458 52.381 0.00 0.00 38.57 2.62
3983 4043 3.194581 CTTTCAAGAAGGAAAGCGAGC 57.805 47.619 3.07 0.00 44.96 5.03
3987 4049 0.670854 AAGAAGGAAAGCGAGCCGTC 60.671 55.000 0.00 0.00 33.59 4.79
4121 4212 4.114794 GTTGTCATTATTCATTGCCAGCC 58.885 43.478 0.00 0.00 0.00 4.85
4125 4216 5.242171 TGTCATTATTCATTGCCAGCCTATG 59.758 40.000 0.00 0.00 0.00 2.23
4202 4297 6.773976 TTTGTTAGATAAGATGCCTTTGGG 57.226 37.500 0.00 0.00 33.94 4.12
4229 4324 5.818857 TGCACCCCGAATTAAGAAATACTAC 59.181 40.000 0.00 0.00 0.00 2.73
4233 4328 6.384886 ACCCCGAATTAAGAAATACTACTCCA 59.615 38.462 0.00 0.00 0.00 3.86
4258 4361 8.204836 CAGTATAGTAACTAGGTTTTGCCTCAT 58.795 37.037 0.00 0.00 46.96 2.90
4328 8135 5.185249 ACCGTTAGCTATCTCAGAAGACAAA 59.815 40.000 0.00 0.00 33.32 2.83
4329 8136 6.100004 CCGTTAGCTATCTCAGAAGACAAAA 58.900 40.000 0.00 0.00 33.32 2.44
4330 8137 6.590292 CCGTTAGCTATCTCAGAAGACAAAAA 59.410 38.462 0.00 0.00 33.32 1.94
4331 8138 7.412020 CCGTTAGCTATCTCAGAAGACAAAAAC 60.412 40.741 0.00 0.00 33.32 2.43
4332 8139 7.116376 CGTTAGCTATCTCAGAAGACAAAAACA 59.884 37.037 0.00 0.00 33.32 2.83
4333 8140 8.774586 GTTAGCTATCTCAGAAGACAAAAACAA 58.225 33.333 0.00 0.00 33.32 2.83
4374 8182 6.826231 TCCACAAATTTCTAGCGATTCCATTA 59.174 34.615 0.00 0.00 0.00 1.90
4377 8185 9.520204 CACAAATTTCTAGCGATTCCATTATTT 57.480 29.630 0.00 0.00 0.00 1.40
4405 8217 0.871024 AAAACCAAAGGGGGATGGGA 59.129 50.000 0.00 0.00 42.91 4.37
4425 8237 4.634004 GGGACATGATACGAATTGTTCACA 59.366 41.667 0.00 0.00 0.00 3.58
4447 8260 2.226330 CCACCACATTTTCGTGAGGAA 58.774 47.619 0.00 0.00 39.34 3.36
4471 8284 6.591935 AGAACAAACAGTTAGGAACAGATCA 58.408 36.000 0.00 0.00 41.51 2.92
4565 8397 1.056660 GGGTCAAGTTGGTGAGAGGA 58.943 55.000 2.34 0.00 0.00 3.71
4684 8522 3.304911 TGTTTGGACCAAGGATTCACA 57.695 42.857 7.07 5.07 0.00 3.58
4697 8535 3.517100 AGGATTCACAAAGAGAGCAGCTA 59.483 43.478 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.515226 ACACACATCCTAACACTTATGTAAAAT 57.485 29.630 0.00 0.00 38.45 1.82
10 11 8.911918 ACACACATCCTAACACTTATGTAAAA 57.088 30.769 0.00 0.00 38.45 1.52
11 12 7.604927 GGACACACATCCTAACACTTATGTAAA 59.395 37.037 0.00 0.00 35.21 2.01
12 13 7.101054 GGACACACATCCTAACACTTATGTAA 58.899 38.462 0.00 0.00 35.21 2.41
13 14 6.636705 GGACACACATCCTAACACTTATGTA 58.363 40.000 0.00 0.00 35.21 2.29
14 15 5.488341 GGACACACATCCTAACACTTATGT 58.512 41.667 0.00 0.00 36.82 2.29
26 27 3.882888 TGTTCTTTGAAGGACACACATCC 59.117 43.478 0.69 0.00 39.57 3.51
27 28 5.695851 ATGTTCTTTGAAGGACACACATC 57.304 39.130 7.00 0.00 46.74 3.06
28 29 5.277974 CGAATGTTCTTTGAAGGACACACAT 60.278 40.000 7.00 0.00 46.74 3.21
29 30 4.035091 CGAATGTTCTTTGAAGGACACACA 59.965 41.667 7.00 0.00 46.74 3.72
30 31 4.272504 TCGAATGTTCTTTGAAGGACACAC 59.727 41.667 7.00 4.26 46.74 3.82
31 32 4.447290 TCGAATGTTCTTTGAAGGACACA 58.553 39.130 7.00 1.38 46.74 3.72
32 33 5.236478 TCTTCGAATGTTCTTTGAAGGACAC 59.764 40.000 7.00 0.00 46.74 3.67
34 35 5.924475 TCTTCGAATGTTCTTTGAAGGAC 57.076 39.130 12.67 0.00 37.30 3.85
35 36 6.936900 AGAATCTTCGAATGTTCTTTGAAGGA 59.063 34.615 15.51 0.00 37.30 3.36
36 37 7.020010 CAGAATCTTCGAATGTTCTTTGAAGG 58.980 38.462 17.59 6.70 37.30 3.46
37 38 7.800767 TCAGAATCTTCGAATGTTCTTTGAAG 58.199 34.615 17.59 8.14 37.87 3.02
38 39 7.728847 TCAGAATCTTCGAATGTTCTTTGAA 57.271 32.000 17.59 6.27 0.00 2.69
39 40 7.728847 TTCAGAATCTTCGAATGTTCTTTGA 57.271 32.000 17.59 12.96 0.00 2.69
40 41 8.961294 ATTTCAGAATCTTCGAATGTTCTTTG 57.039 30.769 17.59 11.43 0.00 2.77
43 44 9.829507 AGATATTTCAGAATCTTCGAATGTTCT 57.170 29.630 15.51 15.51 0.00 3.01
45 46 9.050601 GGAGATATTTCAGAATCTTCGAATGTT 57.949 33.333 0.00 0.00 32.60 2.71
46 47 7.659390 GGGAGATATTTCAGAATCTTCGAATGT 59.341 37.037 0.00 0.00 32.60 2.71
47 48 7.877097 AGGGAGATATTTCAGAATCTTCGAATG 59.123 37.037 0.00 0.00 32.60 2.67
48 49 7.972301 AGGGAGATATTTCAGAATCTTCGAAT 58.028 34.615 0.00 0.00 32.60 3.34
49 50 7.069950 TGAGGGAGATATTTCAGAATCTTCGAA 59.930 37.037 0.00 0.00 32.60 3.71
50 51 6.551227 TGAGGGAGATATTTCAGAATCTTCGA 59.449 38.462 0.00 0.00 32.60 3.71
51 52 6.753180 TGAGGGAGATATTTCAGAATCTTCG 58.247 40.000 0.00 0.00 32.60 3.79
57 58 9.218525 GGGATATATGAGGGAGATATTTCAGAA 57.781 37.037 0.00 0.00 0.00 3.02
58 59 8.354486 TGGGATATATGAGGGAGATATTTCAGA 58.646 37.037 0.00 0.00 0.00 3.27
59 60 8.558713 TGGGATATATGAGGGAGATATTTCAG 57.441 38.462 0.00 0.00 0.00 3.02
60 61 8.942033 CATGGGATATATGAGGGAGATATTTCA 58.058 37.037 0.00 0.00 0.00 2.69
61 62 9.163894 TCATGGGATATATGAGGGAGATATTTC 57.836 37.037 0.00 0.00 31.35 2.17
62 63 9.524903 TTCATGGGATATATGAGGGAGATATTT 57.475 33.333 0.00 0.00 36.07 1.40
63 64 8.943085 GTTCATGGGATATATGAGGGAGATATT 58.057 37.037 0.00 0.00 36.07 1.28
64 65 7.515514 GGTTCATGGGATATATGAGGGAGATAT 59.484 40.741 0.00 0.00 36.07 1.63
65 66 6.846505 GGTTCATGGGATATATGAGGGAGATA 59.153 42.308 0.00 0.00 36.07 1.98
66 67 5.669447 GGTTCATGGGATATATGAGGGAGAT 59.331 44.000 0.00 0.00 36.07 2.75
67 68 5.032846 GGTTCATGGGATATATGAGGGAGA 58.967 45.833 0.00 0.00 36.07 3.71
68 69 5.035556 AGGTTCATGGGATATATGAGGGAG 58.964 45.833 0.00 0.00 36.07 4.30
69 70 5.032846 GAGGTTCATGGGATATATGAGGGA 58.967 45.833 0.00 0.00 36.07 4.20
70 71 4.164988 GGAGGTTCATGGGATATATGAGGG 59.835 50.000 0.00 0.00 36.07 4.30
71 72 4.784838 TGGAGGTTCATGGGATATATGAGG 59.215 45.833 0.00 0.00 36.07 3.86
72 73 6.013032 ACTTGGAGGTTCATGGGATATATGAG 60.013 42.308 0.00 0.00 36.07 2.90
73 74 5.851693 ACTTGGAGGTTCATGGGATATATGA 59.148 40.000 0.00 0.00 33.00 2.15
74 75 6.131972 ACTTGGAGGTTCATGGGATATATG 57.868 41.667 0.00 0.00 0.00 1.78
75 76 7.888514 TTACTTGGAGGTTCATGGGATATAT 57.111 36.000 0.00 0.00 0.00 0.86
76 77 7.699709 TTTACTTGGAGGTTCATGGGATATA 57.300 36.000 0.00 0.00 0.00 0.86
77 78 6.590656 TTTACTTGGAGGTTCATGGGATAT 57.409 37.500 0.00 0.00 0.00 1.63
78 79 6.184789 GTTTTACTTGGAGGTTCATGGGATA 58.815 40.000 0.00 0.00 0.00 2.59
79 80 4.946160 TTTACTTGGAGGTTCATGGGAT 57.054 40.909 0.00 0.00 0.00 3.85
80 81 4.403734 GTTTTACTTGGAGGTTCATGGGA 58.596 43.478 0.00 0.00 0.00 4.37
81 82 3.509967 GGTTTTACTTGGAGGTTCATGGG 59.490 47.826 0.00 0.00 0.00 4.00
82 83 4.148838 TGGTTTTACTTGGAGGTTCATGG 58.851 43.478 0.00 0.00 0.00 3.66
83 84 5.476599 TGATGGTTTTACTTGGAGGTTCATG 59.523 40.000 0.00 0.00 0.00 3.07
84 85 5.640147 TGATGGTTTTACTTGGAGGTTCAT 58.360 37.500 0.00 0.00 0.00 2.57
85 86 5.055265 TGATGGTTTTACTTGGAGGTTCA 57.945 39.130 0.00 0.00 0.00 3.18
86 87 5.125578 GGATGATGGTTTTACTTGGAGGTTC 59.874 44.000 0.00 0.00 0.00 3.62
87 88 5.016831 GGATGATGGTTTTACTTGGAGGTT 58.983 41.667 0.00 0.00 0.00 3.50
88 89 4.292306 AGGATGATGGTTTTACTTGGAGGT 59.708 41.667 0.00 0.00 0.00 3.85
89 90 4.860022 AGGATGATGGTTTTACTTGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
90 91 4.884164 GGAGGATGATGGTTTTACTTGGAG 59.116 45.833 0.00 0.00 0.00 3.86
91 92 4.290985 TGGAGGATGATGGTTTTACTTGGA 59.709 41.667 0.00 0.00 0.00 3.53
92 93 4.599041 TGGAGGATGATGGTTTTACTTGG 58.401 43.478 0.00 0.00 0.00 3.61
93 94 5.887598 TCATGGAGGATGATGGTTTTACTTG 59.112 40.000 0.00 0.00 36.06 3.16
94 95 6.078456 TCATGGAGGATGATGGTTTTACTT 57.922 37.500 0.00 0.00 36.06 2.24
95 96 5.715439 TCATGGAGGATGATGGTTTTACT 57.285 39.130 0.00 0.00 36.06 2.24
96 97 5.888161 ACTTCATGGAGGATGATGGTTTTAC 59.112 40.000 5.84 0.00 40.92 2.01
97 98 5.887598 CACTTCATGGAGGATGATGGTTTTA 59.112 40.000 5.84 0.00 40.92 1.52
98 99 4.708421 CACTTCATGGAGGATGATGGTTTT 59.292 41.667 5.84 0.00 40.92 2.43
99 100 4.264083 ACACTTCATGGAGGATGATGGTTT 60.264 41.667 5.84 0.00 40.92 3.27
100 101 3.267812 ACACTTCATGGAGGATGATGGTT 59.732 43.478 5.84 0.00 40.92 3.67
101 102 2.848694 ACACTTCATGGAGGATGATGGT 59.151 45.455 5.84 0.00 40.92 3.55
102 103 3.118149 TGACACTTCATGGAGGATGATGG 60.118 47.826 5.84 0.00 40.92 3.51
103 104 4.146745 TGACACTTCATGGAGGATGATG 57.853 45.455 5.84 0.00 40.92 3.07
104 105 4.849813 TTGACACTTCATGGAGGATGAT 57.150 40.909 5.84 0.00 40.92 2.45
105 106 4.849813 ATTGACACTTCATGGAGGATGA 57.150 40.909 5.84 0.00 39.47 2.92
106 107 7.423199 CAAATATTGACACTTCATGGAGGATG 58.577 38.462 5.84 0.00 0.00 3.51
107 108 6.040166 GCAAATATTGACACTTCATGGAGGAT 59.960 38.462 5.84 0.00 0.00 3.24
108 109 5.357878 GCAAATATTGACACTTCATGGAGGA 59.642 40.000 5.84 0.00 0.00 3.71
109 110 5.359009 AGCAAATATTGACACTTCATGGAGG 59.641 40.000 5.84 0.00 0.00 4.30
110 111 6.318144 AGAGCAAATATTGACACTTCATGGAG 59.682 38.462 0.00 0.00 0.00 3.86
111 112 6.182627 AGAGCAAATATTGACACTTCATGGA 58.817 36.000 0.00 0.00 0.00 3.41
112 113 6.446781 AGAGCAAATATTGACACTTCATGG 57.553 37.500 0.00 0.00 0.00 3.66
113 114 7.590322 GCATAGAGCAAATATTGACACTTCATG 59.410 37.037 0.00 0.00 44.79 3.07
114 115 7.646314 GCATAGAGCAAATATTGACACTTCAT 58.354 34.615 0.00 0.00 44.79 2.57
115 116 7.019774 GCATAGAGCAAATATTGACACTTCA 57.980 36.000 0.00 0.00 44.79 3.02
131 132 3.371102 TCGAACACCATAGCATAGAGC 57.629 47.619 0.00 0.00 46.19 4.09
132 133 5.176406 CACAATCGAACACCATAGCATAGAG 59.824 44.000 0.00 0.00 0.00 2.43
133 134 5.049828 CACAATCGAACACCATAGCATAGA 58.950 41.667 0.00 0.00 0.00 1.98
134 135 4.212004 CCACAATCGAACACCATAGCATAG 59.788 45.833 0.00 0.00 0.00 2.23
135 136 4.126437 CCACAATCGAACACCATAGCATA 58.874 43.478 0.00 0.00 0.00 3.14
136 137 2.945008 CCACAATCGAACACCATAGCAT 59.055 45.455 0.00 0.00 0.00 3.79
137 138 2.027653 TCCACAATCGAACACCATAGCA 60.028 45.455 0.00 0.00 0.00 3.49
138 139 2.609459 CTCCACAATCGAACACCATAGC 59.391 50.000 0.00 0.00 0.00 2.97
139 140 3.118775 TCCTCCACAATCGAACACCATAG 60.119 47.826 0.00 0.00 0.00 2.23
140 141 2.835156 TCCTCCACAATCGAACACCATA 59.165 45.455 0.00 0.00 0.00 2.74
141 142 1.628340 TCCTCCACAATCGAACACCAT 59.372 47.619 0.00 0.00 0.00 3.55
142 143 1.052617 TCCTCCACAATCGAACACCA 58.947 50.000 0.00 0.00 0.00 4.17
143 144 1.439679 GTCCTCCACAATCGAACACC 58.560 55.000 0.00 0.00 0.00 4.16
144 145 1.068474 CGTCCTCCACAATCGAACAC 58.932 55.000 0.00 0.00 0.00 3.32
145 146 0.677288 ACGTCCTCCACAATCGAACA 59.323 50.000 0.00 0.00 0.00 3.18
146 147 1.347320 GACGTCCTCCACAATCGAAC 58.653 55.000 3.51 0.00 0.00 3.95
147 148 0.109458 CGACGTCCTCCACAATCGAA 60.109 55.000 10.58 0.00 35.98 3.71
148 149 0.956902 TCGACGTCCTCCACAATCGA 60.957 55.000 10.58 0.00 39.04 3.59
149 150 0.109458 TTCGACGTCCTCCACAATCG 60.109 55.000 10.58 0.00 35.49 3.34
150 151 1.336517 TGTTCGACGTCCTCCACAATC 60.337 52.381 10.58 0.00 0.00 2.67
151 152 0.677288 TGTTCGACGTCCTCCACAAT 59.323 50.000 10.58 0.00 0.00 2.71
152 153 0.677288 ATGTTCGACGTCCTCCACAA 59.323 50.000 10.58 0.00 0.00 3.33
153 154 0.242825 GATGTTCGACGTCCTCCACA 59.757 55.000 10.58 8.01 0.00 4.17
154 155 0.526662 AGATGTTCGACGTCCTCCAC 59.473 55.000 10.58 2.14 34.73 4.02
155 156 1.201647 GAAGATGTTCGACGTCCTCCA 59.798 52.381 10.58 4.03 34.73 3.86
156 157 1.201647 TGAAGATGTTCGACGTCCTCC 59.798 52.381 10.58 0.00 34.73 4.30
157 158 2.631418 TGAAGATGTTCGACGTCCTC 57.369 50.000 10.58 1.14 34.73 3.71
158 159 2.296471 ACTTGAAGATGTTCGACGTCCT 59.704 45.455 10.58 0.00 34.73 3.85
159 160 2.408704 CACTTGAAGATGTTCGACGTCC 59.591 50.000 10.58 0.00 34.73 4.79
160 161 3.119792 GTCACTTGAAGATGTTCGACGTC 59.880 47.826 5.18 5.18 35.17 4.34
161 162 3.050619 GTCACTTGAAGATGTTCGACGT 58.949 45.455 0.00 0.00 35.17 4.34
162 163 2.408704 GGTCACTTGAAGATGTTCGACG 59.591 50.000 0.00 0.00 35.17 5.12
163 164 2.737252 GGGTCACTTGAAGATGTTCGAC 59.263 50.000 0.00 0.00 35.17 4.20
164 165 2.289444 GGGGTCACTTGAAGATGTTCGA 60.289 50.000 0.00 0.00 35.17 3.71
165 166 2.076863 GGGGTCACTTGAAGATGTTCG 58.923 52.381 0.00 0.00 35.17 3.95
166 167 3.339141 GAGGGGTCACTTGAAGATGTTC 58.661 50.000 0.00 0.00 0.00 3.18
167 168 2.040412 GGAGGGGTCACTTGAAGATGTT 59.960 50.000 0.00 0.00 0.00 2.71
168 169 1.630878 GGAGGGGTCACTTGAAGATGT 59.369 52.381 0.00 0.00 0.00 3.06
169 170 1.065126 GGGAGGGGTCACTTGAAGATG 60.065 57.143 0.00 0.00 0.00 2.90
170 171 1.203492 AGGGAGGGGTCACTTGAAGAT 60.203 52.381 0.00 0.00 0.00 2.40
171 172 0.193574 AGGGAGGGGTCACTTGAAGA 59.806 55.000 0.00 0.00 0.00 2.87
172 173 0.615850 GAGGGAGGGGTCACTTGAAG 59.384 60.000 0.00 0.00 0.00 3.02
173 174 0.193574 AGAGGGAGGGGTCACTTGAA 59.806 55.000 0.00 0.00 0.00 2.69
174 175 1.089978 TAGAGGGAGGGGTCACTTGA 58.910 55.000 0.00 0.00 0.00 3.02
175 176 1.765314 CATAGAGGGAGGGGTCACTTG 59.235 57.143 0.00 0.00 0.00 3.16
176 177 1.366435 ACATAGAGGGAGGGGTCACTT 59.634 52.381 0.00 0.00 0.00 3.16
177 178 1.019650 ACATAGAGGGAGGGGTCACT 58.980 55.000 0.00 0.00 0.00 3.41
178 179 2.699321 GTTACATAGAGGGAGGGGTCAC 59.301 54.545 0.00 0.00 0.00 3.67
179 180 2.688817 CGTTACATAGAGGGAGGGGTCA 60.689 54.545 0.00 0.00 0.00 4.02
180 181 1.962100 CGTTACATAGAGGGAGGGGTC 59.038 57.143 0.00 0.00 0.00 4.46
181 182 1.572415 TCGTTACATAGAGGGAGGGGT 59.428 52.381 0.00 0.00 0.00 4.95
182 183 2.376695 TCGTTACATAGAGGGAGGGG 57.623 55.000 0.00 0.00 0.00 4.79
183 184 4.153411 AGAATCGTTACATAGAGGGAGGG 58.847 47.826 0.00 0.00 0.00 4.30
184 185 5.074115 AGAGAATCGTTACATAGAGGGAGG 58.926 45.833 0.00 0.00 42.67 4.30
185 186 6.642707 AAGAGAATCGTTACATAGAGGGAG 57.357 41.667 0.00 0.00 42.67 4.30
186 187 6.380274 ACAAAGAGAATCGTTACATAGAGGGA 59.620 38.462 0.00 0.00 42.67 4.20
187 188 6.574350 ACAAAGAGAATCGTTACATAGAGGG 58.426 40.000 0.00 0.00 42.67 4.30
188 189 9.751542 AATACAAAGAGAATCGTTACATAGAGG 57.248 33.333 0.00 0.00 42.67 3.69
193 194 9.436957 AGAACAATACAAAGAGAATCGTTACAT 57.563 29.630 0.00 0.00 42.67 2.29
194 195 8.827177 AGAACAATACAAAGAGAATCGTTACA 57.173 30.769 0.00 0.00 42.67 2.41
198 199 9.877178 AGAATAGAACAATACAAAGAGAATCGT 57.123 29.630 0.00 0.00 42.67 3.73
269 270 4.485163 GACACGGCTTGCAATATCTTTTT 58.515 39.130 0.00 0.00 0.00 1.94
270 271 3.426159 CGACACGGCTTGCAATATCTTTT 60.426 43.478 0.00 0.00 0.00 2.27
271 272 2.095853 CGACACGGCTTGCAATATCTTT 59.904 45.455 0.00 0.00 0.00 2.52
272 273 1.665679 CGACACGGCTTGCAATATCTT 59.334 47.619 0.00 0.00 0.00 2.40
273 274 1.290203 CGACACGGCTTGCAATATCT 58.710 50.000 0.00 0.00 0.00 1.98
274 275 1.006832 ACGACACGGCTTGCAATATC 58.993 50.000 0.00 0.00 0.00 1.63
275 276 0.726827 CACGACACGGCTTGCAATAT 59.273 50.000 0.00 0.00 0.00 1.28
276 277 1.906994 GCACGACACGGCTTGCAATA 61.907 55.000 0.00 0.00 34.97 1.90
277 278 2.945984 CACGACACGGCTTGCAAT 59.054 55.556 0.00 0.00 0.00 3.56
278 279 3.947841 GCACGACACGGCTTGCAA 61.948 61.111 0.00 0.00 34.97 4.08
292 293 3.524648 TTCCCGTTGTCCTCGGCAC 62.525 63.158 0.00 0.00 45.71 5.01
293 294 3.235481 TTCCCGTTGTCCTCGGCA 61.235 61.111 0.00 0.00 45.71 5.69
294 295 1.880819 TAGTTCCCGTTGTCCTCGGC 61.881 60.000 0.00 0.00 45.71 5.54
295 296 0.108945 GTAGTTCCCGTTGTCCTCGG 60.109 60.000 0.00 0.00 46.49 4.63
296 297 0.886563 AGTAGTTCCCGTTGTCCTCG 59.113 55.000 0.00 0.00 0.00 4.63
297 298 2.165234 GGTAGTAGTTCCCGTTGTCCTC 59.835 54.545 0.00 0.00 0.00 3.71
298 299 2.174360 GGTAGTAGTTCCCGTTGTCCT 58.826 52.381 0.00 0.00 0.00 3.85
299 300 2.165234 GAGGTAGTAGTTCCCGTTGTCC 59.835 54.545 0.00 0.00 0.00 4.02
300 301 2.165234 GGAGGTAGTAGTTCCCGTTGTC 59.835 54.545 0.00 0.00 0.00 3.18
301 302 2.174360 GGAGGTAGTAGTTCCCGTTGT 58.826 52.381 0.00 0.00 0.00 3.32
302 303 1.133790 CGGAGGTAGTAGTTCCCGTTG 59.866 57.143 0.00 0.00 33.02 4.10
303 304 1.272147 ACGGAGGTAGTAGTTCCCGTT 60.272 52.381 0.00 0.00 46.64 4.44
304 305 0.329596 ACGGAGGTAGTAGTTCCCGT 59.670 55.000 0.00 0.00 44.37 5.28
305 306 1.403323 GAACGGAGGTAGTAGTTCCCG 59.597 57.143 0.00 0.00 42.30 5.14
308 309 4.525912 TTTGGAACGGAGGTAGTAGTTC 57.474 45.455 0.00 0.00 41.40 3.01
309 310 4.961438 TTTTGGAACGGAGGTAGTAGTT 57.039 40.909 0.00 0.00 0.00 2.24
310 311 6.803366 ATATTTTGGAACGGAGGTAGTAGT 57.197 37.500 0.00 0.00 0.00 2.73
311 312 7.949434 AGTATATTTTGGAACGGAGGTAGTAG 58.051 38.462 0.00 0.00 0.00 2.57
312 313 7.902920 AGTATATTTTGGAACGGAGGTAGTA 57.097 36.000 0.00 0.00 0.00 1.82
313 314 6.803366 AGTATATTTTGGAACGGAGGTAGT 57.197 37.500 0.00 0.00 0.00 2.73
314 315 9.420551 GATTAGTATATTTTGGAACGGAGGTAG 57.579 37.037 0.00 0.00 0.00 3.18
315 316 9.151177 AGATTAGTATATTTTGGAACGGAGGTA 57.849 33.333 0.00 0.00 0.00 3.08
316 317 8.030913 AGATTAGTATATTTTGGAACGGAGGT 57.969 34.615 0.00 0.00 0.00 3.85
337 338 9.908152 TCGTGATATATGACGTTTTGATAGATT 57.092 29.630 21.48 0.00 38.53 2.40
338 339 9.343103 GTCGTGATATATGACGTTTTGATAGAT 57.657 33.333 21.48 0.00 38.53 1.98
339 340 8.347035 TGTCGTGATATATGACGTTTTGATAGA 58.653 33.333 21.48 0.00 46.27 1.98
340 341 8.502161 TGTCGTGATATATGACGTTTTGATAG 57.498 34.615 21.48 0.00 46.27 2.08
341 342 8.859517 TTGTCGTGATATATGACGTTTTGATA 57.140 30.769 21.48 0.86 46.27 2.15
342 343 7.042725 CCTTGTCGTGATATATGACGTTTTGAT 60.043 37.037 21.48 0.00 46.27 2.57
343 344 6.254804 CCTTGTCGTGATATATGACGTTTTGA 59.745 38.462 21.48 2.22 46.27 2.69
344 345 6.254804 TCCTTGTCGTGATATATGACGTTTTG 59.745 38.462 21.48 11.98 46.27 2.44
345 346 6.334989 TCCTTGTCGTGATATATGACGTTTT 58.665 36.000 21.48 0.00 46.27 2.43
346 347 5.898174 TCCTTGTCGTGATATATGACGTTT 58.102 37.500 21.48 0.00 46.27 3.60
347 348 5.509716 TCCTTGTCGTGATATATGACGTT 57.490 39.130 21.48 0.00 46.27 3.99
348 349 5.707242 ATCCTTGTCGTGATATATGACGT 57.293 39.130 21.48 0.86 46.27 4.34
349 350 7.273598 CCTTTATCCTTGTCGTGATATATGACG 59.726 40.741 17.31 17.31 46.27 4.35
350 351 8.304596 TCCTTTATCCTTGTCGTGATATATGAC 58.695 37.037 0.00 0.00 44.09 3.06
351 352 8.417273 TCCTTTATCCTTGTCGTGATATATGA 57.583 34.615 0.00 0.00 0.00 2.15
352 353 9.489084 TTTCCTTTATCCTTGTCGTGATATATG 57.511 33.333 0.00 0.00 0.00 1.78
353 354 9.490379 GTTTCCTTTATCCTTGTCGTGATATAT 57.510 33.333 0.00 0.00 0.00 0.86
354 355 8.701895 AGTTTCCTTTATCCTTGTCGTGATATA 58.298 33.333 0.00 0.00 0.00 0.86
355 356 7.565680 AGTTTCCTTTATCCTTGTCGTGATAT 58.434 34.615 0.00 0.00 0.00 1.63
356 357 6.942976 AGTTTCCTTTATCCTTGTCGTGATA 58.057 36.000 0.00 0.00 0.00 2.15
357 358 5.805728 AGTTTCCTTTATCCTTGTCGTGAT 58.194 37.500 0.00 0.00 0.00 3.06
358 359 5.223449 AGTTTCCTTTATCCTTGTCGTGA 57.777 39.130 0.00 0.00 0.00 4.35
359 360 6.164176 AGTAGTTTCCTTTATCCTTGTCGTG 58.836 40.000 0.00 0.00 0.00 4.35
360 361 6.356186 AGTAGTTTCCTTTATCCTTGTCGT 57.644 37.500 0.00 0.00 0.00 4.34
361 362 6.755607 GGTAGTAGTTTCCTTTATCCTTGTCG 59.244 42.308 0.00 0.00 0.00 4.35
362 363 7.849160 AGGTAGTAGTTTCCTTTATCCTTGTC 58.151 38.462 0.00 0.00 0.00 3.18
363 364 7.092979 GGAGGTAGTAGTTTCCTTTATCCTTGT 60.093 40.741 0.00 0.00 0.00 3.16
364 365 7.273712 GGAGGTAGTAGTTTCCTTTATCCTTG 58.726 42.308 0.00 0.00 0.00 3.61
365 366 6.097981 CGGAGGTAGTAGTTTCCTTTATCCTT 59.902 42.308 0.00 0.00 0.00 3.36
366 367 5.597594 CGGAGGTAGTAGTTTCCTTTATCCT 59.402 44.000 0.00 0.00 0.00 3.24
367 368 5.362143 ACGGAGGTAGTAGTTTCCTTTATCC 59.638 44.000 0.00 0.00 0.00 2.59
368 369 6.462552 ACGGAGGTAGTAGTTTCCTTTATC 57.537 41.667 0.00 0.00 0.00 1.75
369 370 6.666980 AGAACGGAGGTAGTAGTTTCCTTTAT 59.333 38.462 0.00 0.00 0.00 1.40
370 371 6.012745 AGAACGGAGGTAGTAGTTTCCTTTA 58.987 40.000 0.00 0.00 0.00 1.85
371 372 4.837298 AGAACGGAGGTAGTAGTTTCCTTT 59.163 41.667 0.00 0.00 0.00 3.11
372 373 4.414677 AGAACGGAGGTAGTAGTTTCCTT 58.585 43.478 0.00 0.00 0.00 3.36
373 374 4.044946 AGAACGGAGGTAGTAGTTTCCT 57.955 45.455 0.00 0.00 0.00 3.36
374 375 5.904362 TTAGAACGGAGGTAGTAGTTTCC 57.096 43.478 0.00 0.00 0.00 3.13
378 379 9.859152 AGTATATTTTAGAACGGAGGTAGTAGT 57.141 33.333 0.00 0.00 0.00 2.73
381 382 8.791675 GCTAGTATATTTTAGAACGGAGGTAGT 58.208 37.037 0.00 0.00 0.00 2.73
382 383 8.242739 GGCTAGTATATTTTAGAACGGAGGTAG 58.757 40.741 0.00 0.00 0.00 3.18
383 384 7.946776 AGGCTAGTATATTTTAGAACGGAGGTA 59.053 37.037 0.00 0.00 0.00 3.08
384 385 6.781507 AGGCTAGTATATTTTAGAACGGAGGT 59.218 38.462 0.00 0.00 0.00 3.85
385 386 7.229581 AGGCTAGTATATTTTAGAACGGAGG 57.770 40.000 0.00 0.00 0.00 4.30
387 388 9.524496 TGATAGGCTAGTATATTTTAGAACGGA 57.476 33.333 0.00 0.00 0.00 4.69
392 393 9.856488 CGCTTTGATAGGCTAGTATATTTTAGA 57.144 33.333 0.00 0.00 0.00 2.10
393 394 9.640963 ACGCTTTGATAGGCTAGTATATTTTAG 57.359 33.333 0.00 0.00 0.00 1.85
394 395 9.635520 GACGCTTTGATAGGCTAGTATATTTTA 57.364 33.333 0.00 0.00 0.00 1.52
395 396 8.148351 TGACGCTTTGATAGGCTAGTATATTTT 58.852 33.333 0.00 0.00 0.00 1.82
396 397 7.667557 TGACGCTTTGATAGGCTAGTATATTT 58.332 34.615 0.00 0.00 0.00 1.40
397 398 7.228314 TGACGCTTTGATAGGCTAGTATATT 57.772 36.000 0.00 0.00 0.00 1.28
398 399 6.835819 TGACGCTTTGATAGGCTAGTATAT 57.164 37.500 0.00 0.00 0.00 0.86
399 400 6.835819 ATGACGCTTTGATAGGCTAGTATA 57.164 37.500 0.00 0.00 0.00 1.47
400 401 5.730296 ATGACGCTTTGATAGGCTAGTAT 57.270 39.130 0.00 0.00 0.00 2.12
401 402 6.835819 ATATGACGCTTTGATAGGCTAGTA 57.164 37.500 0.00 0.00 0.00 1.82
402 403 5.730296 ATATGACGCTTTGATAGGCTAGT 57.270 39.130 0.00 0.00 0.00 2.57
403 404 8.709386 AAATATATGACGCTTTGATAGGCTAG 57.291 34.615 0.00 0.00 0.00 3.42
405 406 7.986085 AAAATATATGACGCTTTGATAGGCT 57.014 32.000 0.00 0.00 0.00 4.58
410 411 9.445786 CCGTTTTAAAATATATGACGCTTTGAT 57.554 29.630 3.52 0.00 0.00 2.57
411 412 8.666573 TCCGTTTTAAAATATATGACGCTTTGA 58.333 29.630 3.52 0.00 0.00 2.69
412 413 8.829514 TCCGTTTTAAAATATATGACGCTTTG 57.170 30.769 3.52 0.00 0.00 2.77
413 414 9.445786 CATCCGTTTTAAAATATATGACGCTTT 57.554 29.630 3.52 0.00 0.00 3.51
414 415 7.589954 GCATCCGTTTTAAAATATATGACGCTT 59.410 33.333 16.94 1.02 0.00 4.68
415 416 7.075741 GCATCCGTTTTAAAATATATGACGCT 58.924 34.615 16.94 1.15 0.00 5.07
416 417 6.853872 TGCATCCGTTTTAAAATATATGACGC 59.146 34.615 16.94 9.63 0.00 5.19
417 418 8.067784 ACTGCATCCGTTTTAAAATATATGACG 58.932 33.333 16.94 10.04 0.00 4.35
418 419 9.169468 CACTGCATCCGTTTTAAAATATATGAC 57.831 33.333 16.94 11.42 0.00 3.06
419 420 9.114952 TCACTGCATCCGTTTTAAAATATATGA 57.885 29.630 16.94 6.81 0.00 2.15
420 421 9.729023 TTCACTGCATCCGTTTTAAAATATATG 57.271 29.630 3.52 8.90 0.00 1.78
422 423 9.781834 CTTTCACTGCATCCGTTTTAAAATATA 57.218 29.630 3.52 0.00 0.00 0.86
423 424 8.519526 TCTTTCACTGCATCCGTTTTAAAATAT 58.480 29.630 3.52 0.00 0.00 1.28
424 425 7.877003 TCTTTCACTGCATCCGTTTTAAAATA 58.123 30.769 3.52 0.00 0.00 1.40
425 426 6.744112 TCTTTCACTGCATCCGTTTTAAAAT 58.256 32.000 3.52 0.00 0.00 1.82
426 427 6.137794 TCTTTCACTGCATCCGTTTTAAAA 57.862 33.333 0.00 0.00 0.00 1.52
427 428 5.759506 TCTTTCACTGCATCCGTTTTAAA 57.240 34.783 0.00 0.00 0.00 1.52
428 429 5.957842 ATCTTTCACTGCATCCGTTTTAA 57.042 34.783 0.00 0.00 0.00 1.52
429 430 6.170506 AGTATCTTTCACTGCATCCGTTTTA 58.829 36.000 0.00 0.00 0.00 1.52
430 431 5.003804 AGTATCTTTCACTGCATCCGTTTT 58.996 37.500 0.00 0.00 0.00 2.43
431 432 4.579869 AGTATCTTTCACTGCATCCGTTT 58.420 39.130 0.00 0.00 0.00 3.60
432 433 4.184629 GAGTATCTTTCACTGCATCCGTT 58.815 43.478 0.00 0.00 0.00 4.44
433 434 3.430929 GGAGTATCTTTCACTGCATCCGT 60.431 47.826 0.00 0.00 34.75 4.69
434 435 3.126831 GGAGTATCTTTCACTGCATCCG 58.873 50.000 0.00 0.00 34.75 4.18
435 436 3.135530 AGGGAGTATCTTTCACTGCATCC 59.864 47.826 0.00 0.00 36.19 3.51
436 437 4.376146 GAGGGAGTATCTTTCACTGCATC 58.624 47.826 0.00 0.00 37.85 3.91
437 438 3.135530 GGAGGGAGTATCTTTCACTGCAT 59.864 47.826 0.00 0.00 36.54 3.96
438 439 2.501723 GGAGGGAGTATCTTTCACTGCA 59.498 50.000 0.00 0.00 36.54 4.41
439 440 2.482142 CGGAGGGAGTATCTTTCACTGC 60.482 54.545 0.00 0.00 33.57 4.40
440 441 2.761208 ACGGAGGGAGTATCTTTCACTG 59.239 50.000 0.00 0.00 33.73 3.66
441 442 3.103080 ACGGAGGGAGTATCTTTCACT 57.897 47.619 0.00 0.00 33.73 3.41
442 443 4.996788 TTACGGAGGGAGTATCTTTCAC 57.003 45.455 0.00 0.00 33.73 3.18
443 444 5.266788 TCTTTACGGAGGGAGTATCTTTCA 58.733 41.667 0.00 0.00 33.73 2.69
444 445 5.848833 TCTTTACGGAGGGAGTATCTTTC 57.151 43.478 0.00 0.00 33.73 2.62
445 446 6.616237 TTTCTTTACGGAGGGAGTATCTTT 57.384 37.500 0.00 0.00 33.73 2.52
446 447 6.809976 ATTTCTTTACGGAGGGAGTATCTT 57.190 37.500 0.00 0.00 33.73 2.40
447 448 9.245481 CTATATTTCTTTACGGAGGGAGTATCT 57.755 37.037 0.00 0.00 33.73 1.98
448 449 9.240734 TCTATATTTCTTTACGGAGGGAGTATC 57.759 37.037 0.00 0.00 0.00 2.24
449 450 9.597681 TTCTATATTTCTTTACGGAGGGAGTAT 57.402 33.333 0.00 0.00 0.00 2.12
450 451 9.075678 CTTCTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
451 452 7.471679 GCTTCTATATTTCTTTACGGAGGGAGT 60.472 40.741 0.00 0.00 0.00 3.85
452 453 6.869388 GCTTCTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
453 454 6.516194 CGCTTCTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 0.00 4.20
454 455 5.634020 CGCTTCTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
455 456 6.214399 ACGCTTCTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
456 457 7.695869 AACGCTTCTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
457 458 9.241317 CTAAACGCTTCTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
458 459 9.241317 TCTAAACGCTTCTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
472 473 9.570488 CACTACTTTAGTAATCTAAACGCTTCT 57.430 33.333 0.00 0.00 40.05 2.85
473 474 9.565213 TCACTACTTTAGTAATCTAAACGCTTC 57.435 33.333 0.00 0.00 40.05 3.86
474 475 9.351570 GTCACTACTTTAGTAATCTAAACGCTT 57.648 33.333 0.00 0.00 40.05 4.68
475 476 7.972832 GGTCACTACTTTAGTAATCTAAACGCT 59.027 37.037 0.00 0.00 40.05 5.07
476 477 7.972832 AGGTCACTACTTTAGTAATCTAAACGC 59.027 37.037 0.00 0.00 40.05 4.84
482 483 7.972832 GCGTTTAGGTCACTACTTTAGTAATCT 59.027 37.037 0.00 0.00 37.23 2.40
483 484 7.972832 AGCGTTTAGGTCACTACTTTAGTAATC 59.027 37.037 0.00 0.00 37.23 1.75
484 485 7.834803 AGCGTTTAGGTCACTACTTTAGTAAT 58.165 34.615 0.00 0.00 37.23 1.89
485 486 7.219484 AGCGTTTAGGTCACTACTTTAGTAA 57.781 36.000 0.00 0.00 37.23 2.24
486 487 6.824305 AGCGTTTAGGTCACTACTTTAGTA 57.176 37.500 0.00 0.00 37.23 1.82
487 488 5.718724 AGCGTTTAGGTCACTACTTTAGT 57.281 39.130 0.00 0.00 40.28 2.24
488 489 7.417496 AAAAGCGTTTAGGTCACTACTTTAG 57.583 36.000 0.00 0.00 0.00 1.85
489 490 8.143835 AGTAAAAGCGTTTAGGTCACTACTTTA 58.856 33.333 5.01 0.00 29.74 1.85
490 491 6.988580 AGTAAAAGCGTTTAGGTCACTACTTT 59.011 34.615 5.01 0.00 29.74 2.66
491 492 6.519382 AGTAAAAGCGTTTAGGTCACTACTT 58.481 36.000 5.01 0.00 29.74 2.24
492 493 6.094193 AGTAAAAGCGTTTAGGTCACTACT 57.906 37.500 5.01 0.00 29.74 2.57
493 494 5.347093 GGAGTAAAAGCGTTTAGGTCACTAC 59.653 44.000 5.01 0.00 29.74 2.73
494 495 5.473039 GGAGTAAAAGCGTTTAGGTCACTA 58.527 41.667 5.01 0.00 29.74 2.74
495 496 4.313282 GGAGTAAAAGCGTTTAGGTCACT 58.687 43.478 5.01 1.33 29.74 3.41
496 497 3.434641 GGGAGTAAAAGCGTTTAGGTCAC 59.565 47.826 5.01 3.44 29.74 3.67
497 498 3.325716 AGGGAGTAAAAGCGTTTAGGTCA 59.674 43.478 5.01 0.00 29.74 4.02
498 499 3.931468 GAGGGAGTAAAAGCGTTTAGGTC 59.069 47.826 5.01 5.66 29.74 3.85
499 500 3.307269 GGAGGGAGTAAAAGCGTTTAGGT 60.307 47.826 5.01 0.00 29.74 3.08
500 501 3.268330 GGAGGGAGTAAAAGCGTTTAGG 58.732 50.000 5.01 0.00 29.74 2.69
501 502 2.928116 CGGAGGGAGTAAAAGCGTTTAG 59.072 50.000 5.01 0.00 29.74 1.85
502 503 2.299867 ACGGAGGGAGTAAAAGCGTTTA 59.700 45.455 0.33 0.33 0.00 2.01
503 504 1.071228 ACGGAGGGAGTAAAAGCGTTT 59.929 47.619 2.53 2.53 0.00 3.60
504 505 0.683412 ACGGAGGGAGTAAAAGCGTT 59.317 50.000 0.00 0.00 0.00 4.84
505 506 0.245813 GACGGAGGGAGTAAAAGCGT 59.754 55.000 0.00 0.00 0.00 5.07
506 507 0.459759 GGACGGAGGGAGTAAAAGCG 60.460 60.000 0.00 0.00 0.00 4.68
507 508 0.459759 CGGACGGAGGGAGTAAAAGC 60.460 60.000 0.00 0.00 0.00 3.51
508 509 0.459759 GCGGACGGAGGGAGTAAAAG 60.460 60.000 0.00 0.00 0.00 2.27
509 510 1.593265 GCGGACGGAGGGAGTAAAA 59.407 57.895 0.00 0.00 0.00 1.52
510 511 2.703798 CGCGGACGGAGGGAGTAAA 61.704 63.158 0.00 0.00 34.97 2.01
511 512 3.136123 CGCGGACGGAGGGAGTAA 61.136 66.667 0.00 0.00 34.97 2.24
512 513 2.898920 ATTCGCGGACGGAGGGAGTA 62.899 60.000 6.13 0.00 40.63 2.59
513 514 2.898920 TATTCGCGGACGGAGGGAGT 62.899 60.000 6.13 0.00 40.63 3.85
514 515 1.731433 TTATTCGCGGACGGAGGGAG 61.731 60.000 6.13 0.00 40.63 4.30
515 516 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
516 517 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
517 518 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
518 519 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
519 520 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
520 521 1.194495 GTACACTTATTCGCGGACGG 58.806 55.000 6.13 0.00 40.63 4.79
521 522 1.898938 TGTACACTTATTCGCGGACG 58.101 50.000 6.13 0.00 42.01 4.79
522 523 3.703420 AGATGTACACTTATTCGCGGAC 58.297 45.455 6.13 0.00 0.00 4.79
523 524 4.577693 ACTAGATGTACACTTATTCGCGGA 59.422 41.667 6.13 0.00 0.00 5.54
524 525 4.856664 ACTAGATGTACACTTATTCGCGG 58.143 43.478 6.13 0.00 0.00 6.46
525 526 6.807708 AAACTAGATGTACACTTATTCGCG 57.192 37.500 0.00 0.00 0.00 5.87
526 527 8.440833 ACAAAAACTAGATGTACACTTATTCGC 58.559 33.333 0.00 0.00 0.00 4.70
527 528 9.953825 GACAAAAACTAGATGTACACTTATTCG 57.046 33.333 0.00 0.00 0.00 3.34
532 533 9.490379 CTTAGGACAAAAACTAGATGTACACTT 57.510 33.333 0.00 0.00 30.01 3.16
533 534 8.648693 ACTTAGGACAAAAACTAGATGTACACT 58.351 33.333 0.00 0.13 30.01 3.55
534 535 8.828688 ACTTAGGACAAAAACTAGATGTACAC 57.171 34.615 0.00 0.00 30.01 2.90
535 536 8.644216 TGACTTAGGACAAAAACTAGATGTACA 58.356 33.333 0.00 0.00 30.01 2.90
536 537 9.485206 TTGACTTAGGACAAAAACTAGATGTAC 57.515 33.333 0.00 0.00 0.00 2.90
538 539 8.974060 TTTGACTTAGGACAAAAACTAGATGT 57.026 30.769 0.00 0.00 35.10 3.06
539 540 9.057089 ACTTTGACTTAGGACAAAAACTAGATG 57.943 33.333 0.00 0.00 36.87 2.90
540 541 9.628500 AACTTTGACTTAGGACAAAAACTAGAT 57.372 29.630 0.00 0.00 36.87 1.98
541 542 9.457436 AAACTTTGACTTAGGACAAAAACTAGA 57.543 29.630 0.00 0.00 36.87 2.43
592 593 6.758254 AGTGCCATAAATGCTGTTACTTTTT 58.242 32.000 0.00 0.00 0.00 1.94
593 594 6.345096 AGTGCCATAAATGCTGTTACTTTT 57.655 33.333 0.00 0.00 0.00 2.27
594 595 5.982890 AGTGCCATAAATGCTGTTACTTT 57.017 34.783 0.00 0.00 0.00 2.66
595 596 7.461182 TTTAGTGCCATAAATGCTGTTACTT 57.539 32.000 0.00 0.00 0.00 2.24
596 597 7.645058 ATTTAGTGCCATAAATGCTGTTACT 57.355 32.000 3.23 0.00 34.76 2.24
597 598 9.450807 CTAATTTAGTGCCATAAATGCTGTTAC 57.549 33.333 4.53 0.00 35.91 2.50
598 599 9.184523 ACTAATTTAGTGCCATAAATGCTGTTA 57.815 29.630 8.27 0.00 37.69 2.41
599 600 8.066612 ACTAATTTAGTGCCATAAATGCTGTT 57.933 30.769 8.27 0.00 37.69 3.16
600 601 7.645058 ACTAATTTAGTGCCATAAATGCTGT 57.355 32.000 8.27 2.72 37.69 4.40
601 602 9.831737 GATACTAATTTAGTGCCATAAATGCTG 57.168 33.333 17.47 2.27 39.81 4.41
602 603 9.573166 TGATACTAATTTAGTGCCATAAATGCT 57.427 29.630 17.47 0.00 39.81 3.79
603 604 9.612620 GTGATACTAATTTAGTGCCATAAATGC 57.387 33.333 17.47 1.68 39.81 3.56
610 611 9.982651 GAATCTAGTGATACTAATTTAGTGCCA 57.017 33.333 17.47 12.17 39.81 4.92
611 612 9.130312 CGAATCTAGTGATACTAATTTAGTGCC 57.870 37.037 17.47 10.11 39.81 5.01
612 613 9.680315 ACGAATCTAGTGATACTAATTTAGTGC 57.320 33.333 17.47 10.62 39.81 4.40
622 623 9.436957 ACATTTCAAAACGAATCTAGTGATACT 57.563 29.630 0.00 0.00 32.32 2.12
684 685 9.199982 CGACCAATTTTGTAGAAAAGAGTAGTA 57.800 33.333 3.99 0.00 34.53 1.82
685 686 7.929785 TCGACCAATTTTGTAGAAAAGAGTAGT 59.070 33.333 3.99 0.00 34.53 2.73
686 687 8.306680 TCGACCAATTTTGTAGAAAAGAGTAG 57.693 34.615 3.99 2.47 34.53 2.57
687 688 8.665643 TTCGACCAATTTTGTAGAAAAGAGTA 57.334 30.769 3.99 0.00 34.53 2.59
688 689 7.282450 ACTTCGACCAATTTTGTAGAAAAGAGT 59.718 33.333 3.99 1.34 34.53 3.24
689 690 7.639945 ACTTCGACCAATTTTGTAGAAAAGAG 58.360 34.615 3.99 0.00 34.53 2.85
690 691 7.562454 ACTTCGACCAATTTTGTAGAAAAGA 57.438 32.000 3.99 0.00 34.53 2.52
691 692 9.893305 ATAACTTCGACCAATTTTGTAGAAAAG 57.107 29.630 3.99 0.00 34.53 2.27
719 720 9.403583 TCTACCATTTGTTCTAAGTCAAAGTTT 57.596 29.630 0.00 0.00 37.06 2.66
720 721 8.974060 TCTACCATTTGTTCTAAGTCAAAGTT 57.026 30.769 0.00 0.00 37.06 2.66
721 722 8.974060 TTCTACCATTTGTTCTAAGTCAAAGT 57.026 30.769 0.00 0.00 37.06 2.66
722 723 9.057089 ACTTCTACCATTTGTTCTAAGTCAAAG 57.943 33.333 0.00 0.00 37.06 2.77
723 724 8.974060 ACTTCTACCATTTGTTCTAAGTCAAA 57.026 30.769 0.00 0.00 37.82 2.69
724 725 9.485206 GTACTTCTACCATTTGTTCTAAGTCAA 57.515 33.333 0.00 0.00 0.00 3.18
725 726 8.644216 TGTACTTCTACCATTTGTTCTAAGTCA 58.356 33.333 0.00 0.00 0.00 3.41
726 727 8.923683 GTGTACTTCTACCATTTGTTCTAAGTC 58.076 37.037 0.00 0.00 0.00 3.01
727 728 8.648693 AGTGTACTTCTACCATTTGTTCTAAGT 58.351 33.333 0.00 0.00 0.00 2.24
728 729 9.141400 GAGTGTACTTCTACCATTTGTTCTAAG 57.859 37.037 0.00 0.00 0.00 2.18
729 730 7.811236 CGAGTGTACTTCTACCATTTGTTCTAA 59.189 37.037 0.00 0.00 0.00 2.10
730 731 7.310664 CGAGTGTACTTCTACCATTTGTTCTA 58.689 38.462 0.00 0.00 0.00 2.10
731 732 6.157211 CGAGTGTACTTCTACCATTTGTTCT 58.843 40.000 0.00 0.00 0.00 3.01
732 733 5.163982 GCGAGTGTACTTCTACCATTTGTTC 60.164 44.000 0.00 0.00 0.00 3.18
733 734 4.689345 GCGAGTGTACTTCTACCATTTGTT 59.311 41.667 0.00 0.00 0.00 2.83
734 735 4.243270 GCGAGTGTACTTCTACCATTTGT 58.757 43.478 0.00 0.00 0.00 2.83
735 736 3.303495 CGCGAGTGTACTTCTACCATTTG 59.697 47.826 0.00 0.00 0.00 2.32
736 737 3.508762 CGCGAGTGTACTTCTACCATTT 58.491 45.455 0.00 0.00 0.00 2.32
737 738 2.159282 CCGCGAGTGTACTTCTACCATT 60.159 50.000 8.23 0.00 0.00 3.16
738 739 1.404391 CCGCGAGTGTACTTCTACCAT 59.596 52.381 8.23 0.00 0.00 3.55
739 740 0.806868 CCGCGAGTGTACTTCTACCA 59.193 55.000 8.23 0.00 0.00 3.25
740 741 1.089920 TCCGCGAGTGTACTTCTACC 58.910 55.000 8.23 0.00 0.00 3.18
741 742 1.528603 CGTCCGCGAGTGTACTTCTAC 60.529 57.143 8.23 0.00 41.33 2.59
742 743 0.723414 CGTCCGCGAGTGTACTTCTA 59.277 55.000 8.23 0.00 41.33 2.10
743 744 1.500844 CGTCCGCGAGTGTACTTCT 59.499 57.895 8.23 0.00 41.33 2.85
744 745 1.513586 CCGTCCGCGAGTGTACTTC 60.514 63.158 8.23 0.00 41.33 3.01
745 746 1.919956 CTCCGTCCGCGAGTGTACTT 61.920 60.000 8.23 0.00 41.33 2.24
746 747 2.359107 TCCGTCCGCGAGTGTACT 60.359 61.111 8.23 0.00 41.33 2.73
747 748 2.099831 CTCCGTCCGCGAGTGTAC 59.900 66.667 8.23 0.00 41.33 2.90
748 749 3.129502 CCTCCGTCCGCGAGTGTA 61.130 66.667 8.23 0.00 41.33 2.90
752 753 3.904971 TATACTCCCTCCGTCCGCGAG 62.905 61.905 8.23 0.00 41.33 5.03
753 754 2.043604 TATACTCCCTCCGTCCGCGA 62.044 60.000 8.23 0.00 41.33 5.87
754 755 0.959372 ATATACTCCCTCCGTCCGCG 60.959 60.000 0.00 0.00 37.95 6.46
755 756 1.254954 AATATACTCCCTCCGTCCGC 58.745 55.000 0.00 0.00 0.00 5.54
756 757 4.332428 AAAAATATACTCCCTCCGTCCG 57.668 45.455 0.00 0.00 0.00 4.79
775 776 9.466497 TTTACTACTCCTACTATCTCCGAAAAA 57.534 33.333 0.00 0.00 0.00 1.94
776 777 9.638176 ATTTACTACTCCTACTATCTCCGAAAA 57.362 33.333 0.00 0.00 0.00 2.29
779 780 9.887629 CATATTTACTACTCCTACTATCTCCGA 57.112 37.037 0.00 0.00 0.00 4.55
780 781 9.669887 ACATATTTACTACTCCTACTATCTCCG 57.330 37.037 0.00 0.00 0.00 4.63
793 794 9.462606 CCCTCAAAGGAAAACATATTTACTACT 57.537 33.333 0.00 0.00 37.67 2.57
794 795 8.188799 GCCCTCAAAGGAAAACATATTTACTAC 58.811 37.037 0.00 0.00 37.67 2.73
795 796 7.340999 GGCCCTCAAAGGAAAACATATTTACTA 59.659 37.037 0.00 0.00 37.67 1.82
796 797 6.154534 GGCCCTCAAAGGAAAACATATTTACT 59.845 38.462 0.00 0.00 37.67 2.24
813 814 1.259142 CCATGCATTGTGGCCCTCAA 61.259 55.000 11.85 11.85 0.00 3.02
987 989 1.696336 CCTGACATGATACCTCTGGGG 59.304 57.143 0.00 0.00 41.89 4.96
993 995 2.107204 GGGATTGCCTGACATGATACCT 59.893 50.000 0.00 0.00 0.00 3.08
1180 1182 3.682292 CTCCTGTGGGGGCGTTAGC 62.682 68.421 0.00 0.00 44.18 3.09
1270 1272 6.951198 TGTACAGTTGGGGAAATATTTCATGT 59.049 34.615 25.55 19.81 38.92 3.21
1366 1368 6.831664 ACTCCAAATGATACCCATAACTCT 57.168 37.500 0.00 0.00 34.45 3.24
1384 1386 0.036388 GTCATTCGAGGCCAACTCCA 60.036 55.000 5.01 0.00 43.57 3.86
1418 1420 1.682982 CCGACAGTGTCACGAACTAC 58.317 55.000 22.66 0.00 32.09 2.73
1419 1421 0.039798 GCCGACAGTGTCACGAACTA 60.040 55.000 22.66 0.00 32.09 2.24
1420 1422 1.299926 GCCGACAGTGTCACGAACT 60.300 57.895 22.66 0.00 32.09 3.01
1421 1423 1.299926 AGCCGACAGTGTCACGAAC 60.300 57.895 22.66 6.93 32.09 3.95
1422 1424 1.299850 CAGCCGACAGTGTCACGAA 60.300 57.895 22.66 0.00 32.09 3.85
1423 1425 2.335011 CAGCCGACAGTGTCACGA 59.665 61.111 22.66 0.00 32.09 4.35
1465 1467 1.024271 CGCCACTGTAATCCCCAATG 58.976 55.000 0.00 0.00 0.00 2.82
1479 1481 1.786579 GAAAAATGCTTGTGACGCCAC 59.213 47.619 0.00 0.00 43.46 5.01
1565 1567 3.833650 TGATTCCTTGCAATGACAATGGT 59.166 39.130 3.69 0.00 0.00 3.55
1710 1725 4.333372 GCCTGCATTCAACAAATTATTGGG 59.667 41.667 0.00 0.00 41.01 4.12
1812 1828 5.534207 TGTGAAAGCCATCAAATTGACTT 57.466 34.783 0.00 0.00 0.00 3.01
1843 1859 4.436852 CCACGGTAACATCACTGCAATAAC 60.437 45.833 0.00 0.00 0.00 1.89
1917 1933 5.642491 GGGGTAATGTAGACAGAAGTTCAAC 59.358 44.000 5.50 0.00 0.00 3.18
1988 2022 0.527565 CAACAGCCACTTGGTATGCC 59.472 55.000 0.00 0.00 37.57 4.40
2105 2139 1.480954 GATGGTACGACCTGACATGGT 59.519 52.381 0.00 0.00 44.10 3.55
2280 2314 3.190118 GGTCAGCTTCATCAAGAACAAGG 59.810 47.826 0.00 0.00 31.61 3.61
2332 2366 9.428097 AGGAATGAAAGCAATTATTTTCTCAAC 57.572 29.630 12.42 4.53 35.02 3.18
2746 2780 7.547961 CGAGATAACTTACTTTGTATTCTGCG 58.452 38.462 0.00 0.00 0.00 5.18
2967 3002 2.147150 GAGACCTTTGTTCTGGCAGAC 58.853 52.381 18.55 12.93 0.00 3.51
3130 3166 5.698545 AGCAGATAAGATTTACGAGGAATGC 59.301 40.000 0.00 0.00 0.00 3.56
3373 3410 4.106197 GAGTACAAAGCGTGGTAGATGAG 58.894 47.826 0.00 0.00 0.00 2.90
3728 3786 6.564709 TTCACCTTCAAACATCAGATTCAG 57.435 37.500 0.00 0.00 0.00 3.02
3823 3881 3.648339 ACAGCACAGGCAAATTACTTG 57.352 42.857 0.00 0.00 44.61 3.16
3930 3990 3.802685 CCAGCGCTATAGTTAAGGTTCAC 59.197 47.826 10.99 0.00 0.00 3.18
3952 4012 6.038997 TCCTTCTTGAAAGTAGCTTAGGAC 57.961 41.667 0.00 0.00 0.00 3.85
3967 4027 0.951040 ACGGCTCGCTTTCCTTCTTG 60.951 55.000 0.00 0.00 0.00 3.02
3983 4043 4.250464 TCACTAAATAGCCAAACAGACGG 58.750 43.478 0.00 0.00 0.00 4.79
3987 4049 7.703621 CCATTCATTCACTAAATAGCCAAACAG 59.296 37.037 0.00 0.00 0.00 3.16
4065 4127 7.440523 AATTCCGATTCCATAAGAATAGCAC 57.559 36.000 0.00 0.00 45.52 4.40
4091 4153 8.693504 GGCAATGAATAATGACAACATAATTCG 58.306 33.333 0.00 0.00 35.50 3.34
4125 4216 8.762426 CCTAGTTACGGTATTAAAGAAATGAGC 58.238 37.037 0.00 0.00 0.00 4.26
4181 4272 5.450818 ACCCAAAGGCATCTTATCTAACA 57.549 39.130 0.00 0.00 36.11 2.41
4182 4273 6.564328 CAAACCCAAAGGCATCTTATCTAAC 58.436 40.000 0.00 0.00 36.11 2.34
4184 4275 4.644685 GCAAACCCAAAGGCATCTTATCTA 59.355 41.667 0.00 0.00 36.11 1.98
4202 4297 3.926821 TTCTTAATTCGGGGTGCAAAC 57.073 42.857 0.00 0.00 0.00 2.93
4229 4324 6.985059 GGCAAAACCTAGTTACTATACTGGAG 59.015 42.308 2.94 0.00 34.51 3.86
4283 7531 5.874810 CGGTTCATTCCAGTCTTTTGAGATA 59.125 40.000 0.00 0.00 0.00 1.98
4328 8135 8.624776 TGTGGACTTTGATTTTTGTTTTTGTTT 58.375 25.926 0.00 0.00 0.00 2.83
4329 8136 8.159344 TGTGGACTTTGATTTTTGTTTTTGTT 57.841 26.923 0.00 0.00 0.00 2.83
4330 8137 7.736447 TGTGGACTTTGATTTTTGTTTTTGT 57.264 28.000 0.00 0.00 0.00 2.83
4331 8138 9.623350 ATTTGTGGACTTTGATTTTTGTTTTTG 57.377 25.926 0.00 0.00 0.00 2.44
4374 8182 7.962574 TCCCCCTTTGGTTTTAGGTTAATAAAT 59.037 33.333 0.00 0.00 0.00 1.40
4377 8185 6.480891 TCCCCCTTTGGTTTTAGGTTAATA 57.519 37.500 0.00 0.00 0.00 0.98
4378 8186 5.357157 TCCCCCTTTGGTTTTAGGTTAAT 57.643 39.130 0.00 0.00 0.00 1.40
4379 8187 4.828875 TCCCCCTTTGGTTTTAGGTTAA 57.171 40.909 0.00 0.00 0.00 2.01
4380 8188 4.511294 CCATCCCCCTTTGGTTTTAGGTTA 60.511 45.833 0.00 0.00 0.00 2.85
4398 8209 4.389374 ACAATTCGTATCATGTCCCATCC 58.611 43.478 0.00 0.00 0.00 3.51
4405 8217 4.094887 GGCTGTGAACAATTCGTATCATGT 59.905 41.667 0.00 0.00 0.00 3.21
4425 8237 1.238439 CTCACGAAAATGTGGTGGCT 58.762 50.000 0.00 0.00 40.31 4.75
4447 8260 6.591935 TGATCTGTTCCTAACTGTTTGTTCT 58.408 36.000 0.00 0.00 39.89 3.01
4471 8284 0.734253 CGCTACGCACTTGCTCTTCT 60.734 55.000 0.00 0.00 39.32 2.85
4565 8397 4.528039 CCGGCATGGCTCCCCAAT 62.528 66.667 18.09 0.00 46.14 3.16
4657 8489 4.195225 TCCTTGGTCCAAACAAACAAAC 57.805 40.909 5.64 0.00 0.00 2.93
4661 8493 4.142049 TGTGAATCCTTGGTCCAAACAAAC 60.142 41.667 5.64 1.01 0.00 2.93
4697 8535 3.243101 CGATACACCATTCTCGTAGCAGT 60.243 47.826 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.