Multiple sequence alignment - TraesCS3D01G229600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G229600 chr3D 100.000 7296 0 0 1 7296 313184151 313176856 0.000000e+00 13474
1 TraesCS3D01G229600 chr3D 85.345 116 15 2 3680 3794 572018602 572018716 1.290000e-22 119
2 TraesCS3D01G229600 chr3A 96.960 5494 112 23 1375 6851 419331731 419337186 0.000000e+00 9169
3 TraesCS3D01G229600 chr3A 95.299 702 22 6 651 1343 419331038 419331737 0.000000e+00 1103
4 TraesCS3D01G229600 chr3A 92.500 80 6 0 5739 5818 741249555 741249634 1.660000e-21 115
5 TraesCS3D01G229600 chr3B 96.796 4370 110 10 1374 5741 406648842 406653183 0.000000e+00 7267
6 TraesCS3D01G229600 chr3B 91.119 1385 62 24 1 1343 406647481 406648846 0.000000e+00 1820
7 TraesCS3D01G229600 chr3B 92.465 1075 42 20 5822 6880 406653181 406654232 0.000000e+00 1500
8 TraesCS3D01G229600 chr3B 82.079 279 49 1 3508 3786 619870103 619869826 3.400000e-58 237
9 TraesCS3D01G229600 chr4D 79.367 916 164 19 2454 3353 96911674 96910768 8.040000e-174 621
10 TraesCS3D01G229600 chr4D 83.972 287 43 3 3513 3798 25165132 25164848 9.330000e-69 272
11 TraesCS3D01G229600 chr4D 95.349 129 6 0 7130 7258 8089185 8089057 9.590000e-49 206
12 TraesCS3D01G229600 chr4D 93.600 125 8 0 7130 7254 474915813 474915937 3.480000e-43 187
13 TraesCS3D01G229600 chr4D 90.805 87 7 1 5740 5826 509646440 509646355 1.660000e-21 115
14 TraesCS3D01G229600 chr4A 79.148 916 160 24 2454 3350 479412116 479413019 8.100000e-169 604
15 TraesCS3D01G229600 chr5A 81.109 487 87 5 3939 4422 684629469 684628985 1.150000e-102 385
16 TraesCS3D01G229600 chr5A 94.495 109 6 0 6990 7098 618247140 618247032 1.260000e-37 169
17 TraesCS3D01G229600 chr2D 83.673 294 40 6 3514 3800 207551497 207551789 3.350000e-68 270
18 TraesCS3D01G229600 chr2D 81.495 281 48 4 3521 3800 400523200 400523477 2.050000e-55 228
19 TraesCS3D01G229600 chr2D 96.094 128 5 0 7130 7257 472444264 472444137 7.420000e-50 209
20 TraesCS3D01G229600 chr2D 96.000 125 5 0 7130 7254 200808871 200808995 3.450000e-48 204
21 TraesCS3D01G229600 chr2D 94.531 128 7 0 7130 7257 589910616 589910489 1.610000e-46 198
22 TraesCS3D01G229600 chr5B 88.636 220 24 1 3518 3736 289162817 289162598 4.340000e-67 267
23 TraesCS3D01G229600 chr5B 95.062 81 4 0 5740 5820 375800352 375800272 2.140000e-25 128
24 TraesCS3D01G229600 chr2B 83.103 290 42 5 3514 3800 260097438 260097153 2.610000e-64 257
25 TraesCS3D01G229600 chr2B 96.000 125 5 0 7130 7254 150739209 150739333 3.450000e-48 204
26 TraesCS3D01G229600 chr2B 87.097 93 12 0 5737 5829 247368535 247368627 1.000000e-18 106
27 TraesCS3D01G229600 chr4B 81.935 310 44 10 3513 3816 37091368 37091065 1.220000e-62 252
28 TraesCS3D01G229600 chr4B 94.495 109 6 0 6990 7098 649223574 649223682 1.260000e-37 169
29 TraesCS3D01G229600 chr4B 94.937 79 4 0 5740 5818 670403334 670403256 2.760000e-24 124
30 TraesCS3D01G229600 chr1D 94.030 134 8 0 7130 7263 250740958 250740825 3.450000e-48 204
31 TraesCS3D01G229600 chr1D 93.893 131 8 0 7130 7260 92206807 92206677 1.610000e-46 198
32 TraesCS3D01G229600 chr1D 93.636 110 7 0 6990 7099 117968243 117968134 1.630000e-36 165
33 TraesCS3D01G229600 chr1D 93.578 109 7 0 6990 7098 193974358 193974250 5.860000e-36 163
34 TraesCS3D01G229600 chr1D 92.727 110 8 0 6989 7098 92206161 92206052 7.580000e-35 159
35 TraesCS3D01G229600 chr7D 94.574 129 7 0 7130 7258 3606704 3606576 4.460000e-47 200
36 TraesCS3D01G229600 chr7D 95.327 107 5 0 6992 7098 584237014 584236908 3.500000e-38 171
37 TraesCS3D01G229600 chr7D 93.578 109 7 0 6990 7098 474523386 474523278 5.860000e-36 163
38 TraesCS3D01G229600 chr6D 94.595 111 6 0 6988 7098 159027816 159027706 9.730000e-39 172
39 TraesCS3D01G229600 chr1A 93.519 108 7 0 6991 7098 68313960 68314067 2.110000e-35 161
40 TraesCS3D01G229600 chr5D 96.296 81 3 0 5740 5820 324375082 324375002 4.590000e-27 134
41 TraesCS3D01G229600 chr5D 92.222 90 7 0 5737 5826 540230441 540230530 2.140000e-25 128
42 TraesCS3D01G229600 chrUn 88.095 84 10 0 5741 5824 50872449 50872366 4.660000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G229600 chr3D 313176856 313184151 7295 True 13474 13474 100.0000 1 7296 1 chr3D.!!$R1 7295
1 TraesCS3D01G229600 chr3A 419331038 419337186 6148 False 5136 9169 96.1295 651 6851 2 chr3A.!!$F2 6200
2 TraesCS3D01G229600 chr3B 406647481 406654232 6751 False 3529 7267 93.4600 1 6880 3 chr3B.!!$F1 6879
3 TraesCS3D01G229600 chr4D 96910768 96911674 906 True 621 621 79.3670 2454 3353 1 chr4D.!!$R3 899
4 TraesCS3D01G229600 chr4A 479412116 479413019 903 False 604 604 79.1480 2454 3350 1 chr4A.!!$F1 896

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
379 381 0.546747 AGACGGGTCCTCCAAATCCA 60.547 55.000 0.0 0.0 34.36 3.41 F
722 765 0.683504 TGGACCCTCTAGTTCTCCGC 60.684 60.000 0.0 0.0 0.00 5.54 F
756 800 1.067846 TGTGTGTCGCTAGATCGCTTT 60.068 47.619 0.0 0.0 0.00 3.51 F
2791 2870 1.047801 GTTTGGATGGGTTGCAAGGT 58.952 50.000 0.0 0.0 36.96 3.50 F
4432 4522 1.003464 TGTAAGCTGGCTCATTGCTCA 59.997 47.619 0.0 0.0 42.39 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1591 1657 0.178981 AGCCTGTGCACATGGAAGTT 60.179 50.000 28.64 13.92 41.13 2.66 R
1806 1872 2.653726 TGACAACCAGCACATGAAAGT 58.346 42.857 0.00 0.00 0.00 2.66 R
3935 4025 1.667830 ACCGTTCTGCATCCACACG 60.668 57.895 0.00 0.00 0.00 4.49 R
5561 5651 0.109132 CCCAGCGCTGAATTGGAAAC 60.109 55.000 38.06 0.00 33.76 2.78 R
7133 7238 0.032130 AGGCGTCACACTACACTGTG 59.968 55.000 6.19 6.19 42.62 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 5.221722 TGTCTCAAGTTTATCCAGCTTCACT 60.222 40.000 0.00 0.00 0.00 3.41
45 46 8.141268 CAGCTTCACTTTTTCTGGGTTAATAAA 58.859 33.333 0.00 0.00 0.00 1.40
46 47 8.870116 AGCTTCACTTTTTCTGGGTTAATAAAT 58.130 29.630 0.00 0.00 0.00 1.40
53 54 6.746745 TTTCTGGGTTAATAAATCCGTCAC 57.253 37.500 0.00 0.00 38.91 3.67
57 58 6.887545 TCTGGGTTAATAAATCCGTCACATTT 59.112 34.615 0.00 0.00 38.91 2.32
88 89 1.434188 ATGCATATCCCCGGAAGTCA 58.566 50.000 0.73 0.00 0.00 3.41
91 92 1.810412 GCATATCCCCGGAAGTCACAC 60.810 57.143 0.73 0.00 0.00 3.82
146 147 6.881065 CCCAAGATAGTTGAACTGAATTGAGA 59.119 38.462 8.33 0.00 0.00 3.27
147 148 7.391554 CCCAAGATAGTTGAACTGAATTGAGAA 59.608 37.037 8.33 0.00 0.00 2.87
148 149 8.786898 CCAAGATAGTTGAACTGAATTGAGAAA 58.213 33.333 8.33 0.00 0.00 2.52
167 168 7.610865 TGAGAAAAAGTTTGTGTTGATCCTTT 58.389 30.769 0.00 0.00 0.00 3.11
169 170 8.255394 AGAAAAAGTTTGTGTTGATCCTTTTG 57.745 30.769 0.00 0.00 33.71 2.44
204 205 3.458163 CGGGTTCTAGGCCGCTCA 61.458 66.667 0.00 0.00 0.00 4.26
242 244 3.742882 GCATTTTGGCTGGAAGTTTTCTC 59.257 43.478 0.00 0.00 35.30 2.87
302 304 5.655090 TGATTTCAGCCACATCATTCTCATT 59.345 36.000 0.00 0.00 0.00 2.57
322 324 8.001292 TCTCATTATCTCAGACTAGAACATCCA 58.999 37.037 0.00 0.00 0.00 3.41
379 381 0.546747 AGACGGGTCCTCCAAATCCA 60.547 55.000 0.00 0.00 34.36 3.41
418 420 2.628178 TCACTCGTTGTTCCAGACATCT 59.372 45.455 0.00 0.00 38.26 2.90
460 462 1.002544 CTCAAAACCCTCTTCCGCTCT 59.997 52.381 0.00 0.00 0.00 4.09
481 483 1.314730 GTTCCAACAAGGCCGAAAGA 58.685 50.000 0.00 0.00 37.29 2.52
511 513 1.125633 GTTATCCCCGAGGTTAGCCA 58.874 55.000 0.00 0.00 37.19 4.75
533 536 1.758906 GAGGAGGAGAAGGGGGACG 60.759 68.421 0.00 0.00 0.00 4.79
534 537 2.764547 GGAGGAGAAGGGGGACGG 60.765 72.222 0.00 0.00 0.00 4.79
548 551 3.711541 GACGGGGGAACGATGACGG 62.712 68.421 0.00 0.00 44.46 4.79
569 572 2.892425 GCCGTCGAAGCTGGATGG 60.892 66.667 17.87 17.87 42.36 3.51
572 575 1.227089 CGTCGAAGCTGGATGGGAG 60.227 63.158 0.00 0.00 0.00 4.30
573 576 1.144936 GTCGAAGCTGGATGGGAGG 59.855 63.158 0.00 0.00 0.00 4.30
722 765 0.683504 TGGACCCTCTAGTTCTCCGC 60.684 60.000 0.00 0.00 0.00 5.54
723 766 1.726533 GGACCCTCTAGTTCTCCGCG 61.727 65.000 0.00 0.00 0.00 6.46
756 800 1.067846 TGTGTGTCGCTAGATCGCTTT 60.068 47.619 0.00 0.00 0.00 3.51
766 810 1.139095 GATCGCTTTCCCGAGTCGT 59.861 57.895 12.31 0.00 40.97 4.34
813 857 2.807045 GCCACGCTCACTCACTCG 60.807 66.667 0.00 0.00 0.00 4.18
834 881 3.622826 CCCTCCACCAACGACGGT 61.623 66.667 0.00 0.00 41.07 4.83
1047 1101 3.119245 GGTATGTGACGCCAACTCTTCTA 60.119 47.826 0.00 0.00 0.00 2.10
1116 1170 5.403246 CATAGCGAGCCGAACTAGAATATT 58.597 41.667 0.00 0.00 0.00 1.28
1142 1196 2.808543 CCCAATATTCGAGTAGCCTTGC 59.191 50.000 0.00 0.00 0.00 4.01
1246 1300 6.037786 ACTTATTGCTCGGCTGCTATATAA 57.962 37.500 0.00 0.00 32.60 0.98
1247 1301 6.464222 ACTTATTGCTCGGCTGCTATATAAA 58.536 36.000 0.00 0.00 32.60 1.40
1346 1404 8.105097 TGCATTTATGGTGCATATTATTACGT 57.895 30.769 0.00 0.00 46.76 3.57
1347 1405 8.020244 TGCATTTATGGTGCATATTATTACGTG 58.980 33.333 0.00 0.00 46.76 4.49
1348 1406 7.008266 GCATTTATGGTGCATATTATTACGTGC 59.992 37.037 0.00 0.00 42.08 5.34
1349 1407 7.737972 TTTATGGTGCATATTATTACGTGCT 57.262 32.000 0.00 0.00 38.37 4.40
1350 1408 8.834749 TTTATGGTGCATATTATTACGTGCTA 57.165 30.769 0.00 0.00 38.37 3.49
1351 1409 9.443323 TTTATGGTGCATATTATTACGTGCTAT 57.557 29.630 0.00 0.00 38.37 2.97
1352 1410 7.921786 ATGGTGCATATTATTACGTGCTATT 57.078 32.000 0.00 0.00 38.37 1.73
1353 1411 7.359262 TGGTGCATATTATTACGTGCTATTC 57.641 36.000 0.00 0.00 38.37 1.75
1354 1412 6.931840 TGGTGCATATTATTACGTGCTATTCA 59.068 34.615 0.00 0.00 38.37 2.57
1355 1413 7.606073 TGGTGCATATTATTACGTGCTATTCAT 59.394 33.333 0.00 0.00 38.37 2.57
1356 1414 8.450964 GGTGCATATTATTACGTGCTATTCATT 58.549 33.333 0.00 0.00 38.37 2.57
1367 1425 9.767684 TTACGTGCTATTCATTAAGTTTGATTG 57.232 29.630 0.00 0.00 0.00 2.67
1368 1426 8.039603 ACGTGCTATTCATTAAGTTTGATTGA 57.960 30.769 0.00 0.00 0.00 2.57
1369 1427 8.511321 ACGTGCTATTCATTAAGTTTGATTGAA 58.489 29.630 0.00 0.00 0.00 2.69
1370 1428 8.788813 CGTGCTATTCATTAAGTTTGATTGAAC 58.211 33.333 0.00 0.00 0.00 3.18
1371 1429 9.846248 GTGCTATTCATTAAGTTTGATTGAACT 57.154 29.630 0.00 0.00 41.44 3.01
1372 1430 9.844790 TGCTATTCATTAAGTTTGATTGAACTG 57.155 29.630 0.00 0.00 39.68 3.16
1373 1431 9.846248 GCTATTCATTAAGTTTGATTGAACTGT 57.154 29.630 0.00 0.00 39.68 3.55
1412 1470 7.129457 TCAGTGCTATTCTGTTATTCCAGAT 57.871 36.000 0.00 0.00 40.96 2.90
1519 1585 2.460918 GCATGCAAATGATGAGCAGTC 58.539 47.619 14.21 0.00 42.14 3.51
1591 1657 2.285083 GTATGCGCAAATGGTACCAGA 58.715 47.619 21.41 0.00 0.00 3.86
1629 1695 7.227314 CACAGGCTAATTAATCATGTGAGCTAA 59.773 37.037 19.21 0.00 39.03 3.09
1722 1788 8.884124 TGTTGAGAATATTGGAGAGGAAATTT 57.116 30.769 0.00 0.00 0.00 1.82
1745 1811 3.291584 TGTGCAATTGTTACCTTGGTGA 58.708 40.909 7.40 0.00 0.00 4.02
1806 1872 5.848833 TGTTGCAACATATCATATTGGCA 57.151 34.783 27.96 0.01 33.17 4.92
2791 2870 1.047801 GTTTGGATGGGTTGCAAGGT 58.952 50.000 0.00 0.00 36.96 3.50
3892 3982 1.473434 GGGCCATGTTCTTCGTAGGAG 60.473 57.143 4.39 0.00 0.00 3.69
3935 4025 3.743521 TGCATATCACTTATGGGCTGTC 58.256 45.455 0.00 0.00 38.53 3.51
4063 4153 4.220724 TGGGCCTAGTATATCGTTTCACT 58.779 43.478 4.53 0.00 0.00 3.41
4247 4337 2.225019 GGAAGTCATGAAGCATATGCCG 59.775 50.000 23.96 8.05 43.38 5.69
4432 4522 1.003464 TGTAAGCTGGCTCATTGCTCA 59.997 47.619 0.00 0.00 42.39 4.26
4768 4858 9.522804 CACTTTACTCTTCCTAATAGCTTGTAG 57.477 37.037 0.00 0.00 0.00 2.74
5158 5248 4.541973 TCTGAGAAGCAATTCTACTGCA 57.458 40.909 0.00 0.00 42.48 4.41
5540 5630 1.688735 TGTGTTCTCTGACTGGGACTG 59.311 52.381 0.00 0.00 0.00 3.51
5555 5645 3.244422 TGGGACTGCGTCTTCTTGTTAAT 60.244 43.478 8.26 0.00 32.47 1.40
5561 5651 4.854399 TGCGTCTTCTTGTTAATTGTTGG 58.146 39.130 0.00 0.00 0.00 3.77
5620 5710 3.146066 GGTCTTGGCTGTTGACACATAA 58.854 45.455 0.00 0.00 32.84 1.90
5681 5771 8.046708 TGTGATTCACTTGTACTAAAGGCATAT 58.953 33.333 17.26 0.00 35.11 1.78
5749 5839 1.207089 CGCAATGAAGTACTCCCTCCA 59.793 52.381 0.00 0.00 0.00 3.86
5765 5855 7.263901 ACTCCCTCCATCCCATAATATAAGAA 58.736 38.462 0.00 0.00 0.00 2.52
5921 6012 2.164624 ACAGCATTGGAGAGTCGTCTAC 59.835 50.000 0.00 0.00 33.58 2.59
5976 6067 1.471684 GGAGTCGAAGTTTCCGAGCTA 59.528 52.381 0.00 0.00 36.66 3.32
6056 6148 4.195225 TGTTTATCTCACATGGCGTGTA 57.805 40.909 12.81 0.00 46.44 2.90
6064 6156 1.196808 CACATGGCGTGTACTTTGGTC 59.803 52.381 12.81 0.00 39.62 4.02
6180 6272 2.328319 AGTTAACGAGTACAACCCCCA 58.672 47.619 0.00 0.00 0.00 4.96
6254 6346 1.881602 CTGAAAGAGGCCTTGCAGC 59.118 57.895 6.77 0.00 46.09 5.25
6300 6392 3.862267 CACAAGAGGAAGCGATGAACTAG 59.138 47.826 0.00 0.00 0.00 2.57
6314 6406 3.781808 TGAACTAGTACCACTGGCCTAA 58.218 45.455 3.32 0.00 28.76 2.69
6315 6407 4.359105 TGAACTAGTACCACTGGCCTAAT 58.641 43.478 3.32 0.00 28.76 1.73
6316 6408 5.521696 TGAACTAGTACCACTGGCCTAATA 58.478 41.667 3.32 0.00 28.76 0.98
6414 6506 6.030548 TGGTGAGACTTCTAGAATGTTCAG 57.969 41.667 5.44 0.00 0.00 3.02
6415 6507 5.540337 TGGTGAGACTTCTAGAATGTTCAGT 59.460 40.000 5.44 0.00 0.00 3.41
6420 6512 7.055667 AGACTTCTAGAATGTTCAGTTGTCA 57.944 36.000 5.44 0.00 0.00 3.58
6461 6554 4.335594 AGTTTAGCTGGGATTATGAAACGC 59.664 41.667 0.00 0.00 32.07 4.84
6462 6555 1.299541 AGCTGGGATTATGAAACGCG 58.700 50.000 3.53 3.53 0.00 6.01
6463 6556 1.134521 AGCTGGGATTATGAAACGCGA 60.135 47.619 15.93 0.00 0.00 5.87
6464 6557 1.261619 GCTGGGATTATGAAACGCGAG 59.738 52.381 15.93 0.00 0.00 5.03
6465 6558 1.261619 CTGGGATTATGAAACGCGAGC 59.738 52.381 15.93 1.19 0.00 5.03
6466 6559 0.232303 GGGATTATGAAACGCGAGCG 59.768 55.000 15.93 16.38 46.03 5.03
6467 6560 0.232303 GGATTATGAAACGCGAGCGG 59.768 55.000 21.69 4.05 44.69 5.52
6468 6561 0.928229 GATTATGAAACGCGAGCGGT 59.072 50.000 21.69 12.96 44.69 5.68
6474 6567 3.353836 AACGCGAGCGGTTGCAAT 61.354 55.556 25.42 10.95 46.23 3.56
6475 6568 3.593551 AACGCGAGCGGTTGCAATG 62.594 57.895 25.42 12.48 46.23 2.82
6508 6601 0.560688 TTTTCCAGGGTTTCAGGCCT 59.439 50.000 0.00 0.00 0.00 5.19
6512 6605 1.303643 CAGGGTTTCAGGCCTGGTC 60.304 63.158 32.23 20.75 0.00 4.02
6698 6795 1.002792 GGCATATCCCTTTTTCGCGAC 60.003 52.381 9.15 0.00 0.00 5.19
6715 6812 6.563398 TCGCGACTAAACTTGTTGTATATG 57.437 37.500 3.71 0.00 0.00 1.78
6775 6878 5.472478 GGAGGATAGAACTGGAAACGTTTTT 59.528 40.000 15.89 5.12 0.00 1.94
6802 6905 4.512944 TCAAAATGAATCTATCGCTCTGCC 59.487 41.667 0.00 0.00 0.00 4.85
6803 6906 2.360553 ATGAATCTATCGCTCTGCCG 57.639 50.000 0.00 0.00 0.00 5.69
6804 6907 1.032794 TGAATCTATCGCTCTGCCGT 58.967 50.000 0.00 0.00 0.00 5.68
6822 6926 1.635844 GTCACACACACACACGAGAA 58.364 50.000 0.00 0.00 0.00 2.87
6823 6927 2.201732 GTCACACACACACACGAGAAT 58.798 47.619 0.00 0.00 0.00 2.40
6828 6932 2.656897 CACACACACACGAGAATACGAG 59.343 50.000 0.00 0.00 37.03 4.18
6853 6958 2.830651 ACGTAGAGGACCAGGAGAAT 57.169 50.000 0.00 0.00 0.00 2.40
6860 6965 2.838202 GAGGACCAGGAGAATACCAACA 59.162 50.000 0.00 0.00 0.00 3.33
6863 6968 3.456277 GGACCAGGAGAATACCAACAGAT 59.544 47.826 0.00 0.00 0.00 2.90
6880 6985 3.132111 ACAGATTGTTCCAACACAAACCC 59.868 43.478 0.00 0.00 40.07 4.11
6881 6986 2.360801 AGATTGTTCCAACACAAACCCG 59.639 45.455 0.00 0.00 40.07 5.28
6882 6987 0.173708 TTGTTCCAACACAAACCCGC 59.826 50.000 0.00 0.00 38.92 6.13
6883 6988 1.066752 GTTCCAACACAAACCCGCC 59.933 57.895 0.00 0.00 0.00 6.13
6884 6989 2.482333 TTCCAACACAAACCCGCCG 61.482 57.895 0.00 0.00 0.00 6.46
6885 6990 2.888464 TTCCAACACAAACCCGCCGA 62.888 55.000 0.00 0.00 0.00 5.54
6886 6991 2.637025 CAACACAAACCCGCCGAG 59.363 61.111 0.00 0.00 0.00 4.63
6887 6992 2.593436 AACACAAACCCGCCGAGG 60.593 61.111 0.00 0.00 40.63 4.63
6888 6993 3.409605 AACACAAACCCGCCGAGGT 62.410 57.895 0.00 0.00 44.00 3.85
6894 6999 3.149992 ACCCGCCGAGGTTGTTAA 58.850 55.556 0.00 0.00 36.44 2.01
6895 7000 1.451072 ACCCGCCGAGGTTGTTAAA 59.549 52.632 0.00 0.00 36.44 1.52
6896 7001 0.179023 ACCCGCCGAGGTTGTTAAAA 60.179 50.000 0.00 0.00 36.44 1.52
6897 7002 0.953003 CCCGCCGAGGTTGTTAAAAA 59.047 50.000 0.00 0.00 38.74 1.94
6917 7022 4.384599 AAAAACCCGCCGAGGTAC 57.615 55.556 0.00 0.00 40.05 3.34
6918 7023 1.302752 AAAAACCCGCCGAGGTACC 60.303 57.895 2.73 2.73 40.05 3.34
6919 7024 2.753009 AAAAACCCGCCGAGGTACCC 62.753 60.000 8.74 0.00 40.05 3.69
6937 7042 3.782244 CGCGCTGCAGTCCTTGTC 61.782 66.667 16.64 0.00 0.00 3.18
6938 7043 3.782244 GCGCTGCAGTCCTTGTCG 61.782 66.667 16.64 9.40 0.00 4.35
6939 7044 3.782244 CGCTGCAGTCCTTGTCGC 61.782 66.667 16.64 0.00 0.00 5.19
6940 7045 2.358003 GCTGCAGTCCTTGTCGCT 60.358 61.111 16.64 0.00 0.00 4.93
6941 7046 1.079819 GCTGCAGTCCTTGTCGCTA 60.080 57.895 16.64 0.00 0.00 4.26
6942 7047 1.080995 GCTGCAGTCCTTGTCGCTAG 61.081 60.000 16.64 0.00 0.00 3.42
6943 7048 0.459237 CTGCAGTCCTTGTCGCTAGG 60.459 60.000 5.25 2.01 0.00 3.02
6944 7049 0.898326 TGCAGTCCTTGTCGCTAGGA 60.898 55.000 6.08 6.08 39.46 2.94
6945 7050 0.246635 GCAGTCCTTGTCGCTAGGAA 59.753 55.000 10.46 0.00 43.18 3.36
6946 7051 1.337823 GCAGTCCTTGTCGCTAGGAAA 60.338 52.381 10.46 0.00 43.18 3.13
6947 7052 2.338500 CAGTCCTTGTCGCTAGGAAAC 58.662 52.381 10.46 2.75 43.18 2.78
6948 7053 1.968493 AGTCCTTGTCGCTAGGAAACA 59.032 47.619 10.46 0.00 43.18 2.83
6949 7054 2.067013 GTCCTTGTCGCTAGGAAACAC 58.933 52.381 10.46 0.00 43.18 3.32
6950 7055 1.689813 TCCTTGTCGCTAGGAAACACA 59.310 47.619 7.36 0.00 38.83 3.72
6951 7056 1.798813 CCTTGTCGCTAGGAAACACAC 59.201 52.381 0.00 0.00 34.56 3.82
6952 7057 2.548067 CCTTGTCGCTAGGAAACACACT 60.548 50.000 0.00 0.00 34.56 3.55
6953 7058 3.305813 CCTTGTCGCTAGGAAACACACTA 60.306 47.826 0.00 0.00 34.56 2.74
6954 7059 3.293311 TGTCGCTAGGAAACACACTAC 57.707 47.619 0.00 0.00 0.00 2.73
6955 7060 2.248487 GTCGCTAGGAAACACACTACG 58.752 52.381 0.00 0.00 0.00 3.51
6956 7061 1.200716 TCGCTAGGAAACACACTACGG 59.799 52.381 0.00 0.00 0.00 4.02
6957 7062 1.200716 CGCTAGGAAACACACTACGGA 59.799 52.381 0.00 0.00 0.00 4.69
6958 7063 2.352030 CGCTAGGAAACACACTACGGAA 60.352 50.000 0.00 0.00 0.00 4.30
6959 7064 2.991866 GCTAGGAAACACACTACGGAAC 59.008 50.000 0.00 0.00 0.00 3.62
6960 7065 2.538512 AGGAAACACACTACGGAACC 57.461 50.000 0.00 0.00 0.00 3.62
6961 7066 2.044758 AGGAAACACACTACGGAACCT 58.955 47.619 0.00 0.00 0.00 3.50
6962 7067 2.140717 GGAAACACACTACGGAACCTG 58.859 52.381 0.00 0.00 0.00 4.00
6963 7068 2.484241 GGAAACACACTACGGAACCTGT 60.484 50.000 0.00 0.00 0.00 4.00
6964 7069 2.234300 AACACACTACGGAACCTGTG 57.766 50.000 8.66 8.66 39.96 3.66
6965 7070 0.249741 ACACACTACGGAACCTGTGC 60.250 55.000 9.72 0.00 38.04 4.57
6966 7071 0.949105 CACACTACGGAACCTGTGCC 60.949 60.000 0.00 0.00 34.14 5.01
6967 7072 1.375523 CACTACGGAACCTGTGCCC 60.376 63.158 0.00 0.00 0.00 5.36
6969 7074 2.601067 TACGGAACCTGTGCCCGA 60.601 61.111 15.34 1.03 45.58 5.14
6970 7075 1.956629 CTACGGAACCTGTGCCCGAT 61.957 60.000 15.34 5.54 45.58 4.18
6971 7076 1.952102 TACGGAACCTGTGCCCGATC 61.952 60.000 15.34 0.00 45.58 3.69
6972 7077 2.511600 GGAACCTGTGCCCGATCG 60.512 66.667 8.51 8.51 0.00 3.69
6973 7078 3.195698 GAACCTGTGCCCGATCGC 61.196 66.667 10.32 0.00 0.00 4.58
6974 7079 4.778143 AACCTGTGCCCGATCGCC 62.778 66.667 10.32 3.15 0.00 5.54
6976 7081 4.899239 CCTGTGCCCGATCGCCTC 62.899 72.222 10.32 4.47 0.00 4.70
6977 7082 4.899239 CTGTGCCCGATCGCCTCC 62.899 72.222 10.32 0.00 0.00 4.30
6979 7084 4.467084 GTGCCCGATCGCCTCCAA 62.467 66.667 10.32 0.00 0.00 3.53
6980 7085 3.479203 TGCCCGATCGCCTCCAAT 61.479 61.111 10.32 0.00 0.00 3.16
6981 7086 2.666526 GCCCGATCGCCTCCAATC 60.667 66.667 10.32 0.00 0.00 2.67
6982 7087 2.031163 CCCGATCGCCTCCAATCC 59.969 66.667 10.32 0.00 0.00 3.01
6983 7088 2.356313 CCGATCGCCTCCAATCCG 60.356 66.667 10.32 0.00 0.00 4.18
6984 7089 2.356313 CGATCGCCTCCAATCCGG 60.356 66.667 0.26 0.00 0.00 5.14
6985 7090 2.666526 GATCGCCTCCAATCCGGC 60.667 66.667 0.00 0.00 42.86 6.13
6986 7091 4.256180 ATCGCCTCCAATCCGGCC 62.256 66.667 0.00 0.00 43.38 6.13
6988 7093 4.918201 CGCCTCCAATCCGGCCTC 62.918 72.222 0.00 0.00 43.38 4.70
6989 7094 4.918201 GCCTCCAATCCGGCCTCG 62.918 72.222 0.00 0.00 40.43 4.63
6999 7104 3.273048 CGGCCTCGGCAAAATTGA 58.727 55.556 10.51 0.00 44.11 2.57
7000 7105 1.154035 CGGCCTCGGCAAAATTGAC 60.154 57.895 10.51 0.00 44.11 3.18
7001 7106 1.861542 CGGCCTCGGCAAAATTGACA 61.862 55.000 10.51 0.00 44.11 3.58
7002 7107 0.316841 GGCCTCGGCAAAATTGACAA 59.683 50.000 10.51 0.00 44.11 3.18
7003 7108 1.270041 GGCCTCGGCAAAATTGACAAA 60.270 47.619 10.51 0.00 44.11 2.83
7004 7109 2.612721 GGCCTCGGCAAAATTGACAAAT 60.613 45.455 10.51 0.00 44.11 2.32
7005 7110 3.066380 GCCTCGGCAAAATTGACAAATT 58.934 40.909 2.41 0.00 41.49 1.82
7006 7111 3.498018 GCCTCGGCAAAATTGACAAATTT 59.502 39.130 2.41 0.00 45.81 1.82
7007 7112 4.611130 GCCTCGGCAAAATTGACAAATTTG 60.611 41.667 19.89 19.89 43.63 2.32
7008 7113 4.749099 CCTCGGCAAAATTGACAAATTTGA 59.251 37.500 25.81 9.64 43.63 2.69
7009 7114 5.333263 CCTCGGCAAAATTGACAAATTTGAC 60.333 40.000 25.81 23.13 43.63 3.18
7010 7115 4.509600 TCGGCAAAATTGACAAATTTGACC 59.490 37.500 25.81 22.88 43.63 4.02
7011 7116 4.511082 CGGCAAAATTGACAAATTTGACCT 59.489 37.500 25.81 2.04 43.63 3.85
7012 7117 5.694006 CGGCAAAATTGACAAATTTGACCTA 59.306 36.000 25.81 12.29 43.63 3.08
7013 7118 6.368516 CGGCAAAATTGACAAATTTGACCTAT 59.631 34.615 25.81 13.80 43.63 2.57
7014 7119 7.543868 CGGCAAAATTGACAAATTTGACCTATA 59.456 33.333 25.81 5.02 43.63 1.31
7015 7120 8.872845 GGCAAAATTGACAAATTTGACCTATAG 58.127 33.333 25.81 8.81 43.63 1.31
7016 7121 9.638239 GCAAAATTGACAAATTTGACCTATAGA 57.362 29.630 25.81 0.00 43.63 1.98
7018 7123 9.840427 AAAATTGACAAATTTGACCTATAGACG 57.160 29.630 24.64 0.00 43.63 4.18
7019 7124 8.786826 AATTGACAAATTTGACCTATAGACGA 57.213 30.769 24.64 0.00 31.76 4.20
7020 7125 8.786826 ATTGACAAATTTGACCTATAGACGAA 57.213 30.769 24.64 6.04 0.00 3.85
7021 7126 8.610248 TTGACAAATTTGACCTATAGACGAAA 57.390 30.769 24.64 2.44 0.00 3.46
7022 7127 8.786826 TGACAAATTTGACCTATAGACGAAAT 57.213 30.769 24.64 0.00 0.00 2.17
7023 7128 9.226606 TGACAAATTTGACCTATAGACGAAATT 57.773 29.630 24.64 5.70 0.00 1.82
7031 7136 9.878667 TTGACCTATAGACGAAATTAAATCACA 57.121 29.630 0.00 0.00 0.00 3.58
7032 7137 9.529325 TGACCTATAGACGAAATTAAATCACAG 57.471 33.333 0.00 0.00 0.00 3.66
7033 7138 9.745880 GACCTATAGACGAAATTAAATCACAGA 57.254 33.333 0.00 0.00 0.00 3.41
7042 7147 9.341899 ACGAAATTAAATCACAGAATAAACTGC 57.658 29.630 0.00 0.00 41.06 4.40
7043 7148 8.798153 CGAAATTAAATCACAGAATAAACTGCC 58.202 33.333 0.00 0.00 41.06 4.85
7044 7149 9.087424 GAAATTAAATCACAGAATAAACTGCCC 57.913 33.333 0.00 0.00 41.06 5.36
7045 7150 4.701956 AAATCACAGAATAAACTGCCCG 57.298 40.909 0.00 0.00 41.06 6.13
7046 7151 2.851263 TCACAGAATAAACTGCCCGT 57.149 45.000 0.00 0.00 41.06 5.28
7047 7152 2.422597 TCACAGAATAAACTGCCCGTG 58.577 47.619 0.00 0.00 41.06 4.94
7048 7153 2.037902 TCACAGAATAAACTGCCCGTGA 59.962 45.455 0.00 0.00 41.06 4.35
7049 7154 2.811431 CACAGAATAAACTGCCCGTGAA 59.189 45.455 0.00 0.00 41.06 3.18
7050 7155 3.252215 CACAGAATAAACTGCCCGTGAAA 59.748 43.478 0.00 0.00 41.06 2.69
7051 7156 3.252458 ACAGAATAAACTGCCCGTGAAAC 59.748 43.478 0.00 0.00 41.06 2.78
7052 7157 3.502211 CAGAATAAACTGCCCGTGAAACT 59.498 43.478 0.00 0.00 31.75 2.66
7053 7158 4.693566 CAGAATAAACTGCCCGTGAAACTA 59.306 41.667 0.00 0.00 31.75 2.24
7054 7159 5.354234 CAGAATAAACTGCCCGTGAAACTAT 59.646 40.000 0.00 0.00 31.75 2.12
7055 7160 5.944007 AGAATAAACTGCCCGTGAAACTATT 59.056 36.000 0.00 0.00 31.75 1.73
7056 7161 6.433093 AGAATAAACTGCCCGTGAAACTATTT 59.567 34.615 0.00 0.00 31.75 1.40
7057 7162 4.499037 AAACTGCCCGTGAAACTATTTC 57.501 40.909 0.00 0.00 40.08 2.17
7058 7163 3.134574 ACTGCCCGTGAAACTATTTCA 57.865 42.857 0.00 0.00 46.68 2.69
7068 7173 5.627499 TGAAACTATTTCACATGGCTGAC 57.373 39.130 0.00 0.00 44.21 3.51
7069 7174 5.069318 TGAAACTATTTCACATGGCTGACA 58.931 37.500 0.00 0.00 44.21 3.58
7070 7175 5.711506 TGAAACTATTTCACATGGCTGACAT 59.288 36.000 0.00 0.00 44.21 3.06
7071 7176 6.209192 TGAAACTATTTCACATGGCTGACATT 59.791 34.615 0.00 0.00 44.21 2.71
7072 7177 6.594788 AACTATTTCACATGGCTGACATTT 57.405 33.333 0.00 0.00 37.84 2.32
7073 7178 6.594788 ACTATTTCACATGGCTGACATTTT 57.405 33.333 0.00 0.00 37.84 1.82
7074 7179 6.996509 ACTATTTCACATGGCTGACATTTTT 58.003 32.000 0.00 0.00 37.84 1.94
7075 7180 6.869913 ACTATTTCACATGGCTGACATTTTTG 59.130 34.615 0.00 0.00 37.84 2.44
7076 7181 4.669206 TTCACATGGCTGACATTTTTGT 57.331 36.364 0.00 0.00 37.84 2.83
7077 7182 3.979948 TCACATGGCTGACATTTTTGTG 58.020 40.909 8.35 8.35 37.84 3.33
7078 7183 3.384146 TCACATGGCTGACATTTTTGTGT 59.616 39.130 13.10 0.00 37.53 3.72
7079 7184 3.491639 CACATGGCTGACATTTTTGTGTG 59.508 43.478 6.77 2.99 37.84 3.82
7080 7185 3.384146 ACATGGCTGACATTTTTGTGTGA 59.616 39.130 0.00 0.00 37.84 3.58
7081 7186 3.435105 TGGCTGACATTTTTGTGTGAC 57.565 42.857 0.00 0.00 31.16 3.67
7082 7187 2.223456 TGGCTGACATTTTTGTGTGACG 60.223 45.455 0.00 0.00 31.16 4.35
7083 7188 2.223479 GGCTGACATTTTTGTGTGACGT 60.223 45.455 0.00 0.00 31.16 4.34
7084 7189 3.035942 GCTGACATTTTTGTGTGACGTC 58.964 45.455 9.11 9.11 31.16 4.34
7085 7190 3.617669 CTGACATTTTTGTGTGACGTCC 58.382 45.455 14.12 5.06 31.16 4.79
7086 7191 2.031068 TGACATTTTTGTGTGACGTCCG 59.969 45.455 14.12 0.00 31.16 4.79
7087 7192 2.281517 ACATTTTTGTGTGACGTCCGA 58.718 42.857 14.12 0.00 0.00 4.55
7088 7193 2.031191 ACATTTTTGTGTGACGTCCGAC 59.969 45.455 14.12 10.01 0.00 4.79
7089 7194 1.723220 TTTTTGTGTGACGTCCGACA 58.277 45.000 14.12 12.64 0.00 4.35
7090 7195 1.000884 TTTTGTGTGACGTCCGACAC 58.999 50.000 24.68 24.68 42.40 3.67
7107 7212 3.856508 CGAAGGCGTAGTGTGGTG 58.143 61.111 0.00 0.00 0.00 4.17
7108 7213 1.006571 CGAAGGCGTAGTGTGGTGT 60.007 57.895 0.00 0.00 0.00 4.16
7109 7214 1.282248 CGAAGGCGTAGTGTGGTGTG 61.282 60.000 0.00 0.00 0.00 3.82
7110 7215 0.032952 GAAGGCGTAGTGTGGTGTGA 59.967 55.000 0.00 0.00 0.00 3.58
7111 7216 0.249741 AAGGCGTAGTGTGGTGTGAC 60.250 55.000 0.00 0.00 0.00 3.67
7112 7217 2.019951 GGCGTAGTGTGGTGTGACG 61.020 63.158 0.00 0.00 36.62 4.35
7113 7218 3.534160 CGTAGTGTGGTGTGACGC 58.466 61.111 0.00 0.00 0.00 5.19
7114 7219 2.019951 CGTAGTGTGGTGTGACGCC 61.020 63.158 8.52 8.52 34.12 5.68
7115 7220 1.366366 GTAGTGTGGTGTGACGCCT 59.634 57.895 17.02 0.00 34.70 5.52
7116 7221 0.249741 GTAGTGTGGTGTGACGCCTT 60.250 55.000 17.02 2.37 34.70 4.35
7117 7222 0.032952 TAGTGTGGTGTGACGCCTTC 59.967 55.000 17.02 9.96 34.70 3.46
7118 7223 2.279851 TGTGGTGTGACGCCTTCG 60.280 61.111 17.02 0.00 42.43 3.79
7129 7234 2.738147 CGCCTTCGTGTAGTCCTTG 58.262 57.895 0.00 0.00 0.00 3.61
7130 7235 0.038526 CGCCTTCGTGTAGTCCTTGT 60.039 55.000 0.00 0.00 0.00 3.16
7131 7236 1.604693 CGCCTTCGTGTAGTCCTTGTT 60.605 52.381 0.00 0.00 0.00 2.83
7132 7237 1.798813 GCCTTCGTGTAGTCCTTGTTG 59.201 52.381 0.00 0.00 0.00 3.33
7133 7238 1.798813 CCTTCGTGTAGTCCTTGTTGC 59.201 52.381 0.00 0.00 0.00 4.17
7134 7239 2.479837 CTTCGTGTAGTCCTTGTTGCA 58.520 47.619 0.00 0.00 0.00 4.08
7135 7240 1.860676 TCGTGTAGTCCTTGTTGCAC 58.139 50.000 0.00 0.00 0.00 4.57
7136 7241 1.137282 TCGTGTAGTCCTTGTTGCACA 59.863 47.619 0.00 0.00 0.00 4.57
7137 7242 1.526887 CGTGTAGTCCTTGTTGCACAG 59.473 52.381 0.00 0.00 0.00 3.66
7138 7243 2.561569 GTGTAGTCCTTGTTGCACAGT 58.438 47.619 0.00 0.00 0.00 3.55
7139 7244 2.287915 GTGTAGTCCTTGTTGCACAGTG 59.712 50.000 0.00 0.00 0.00 3.66
7140 7245 2.093181 TGTAGTCCTTGTTGCACAGTGT 60.093 45.455 1.61 0.00 0.00 3.55
7141 7246 3.133183 TGTAGTCCTTGTTGCACAGTGTA 59.867 43.478 1.61 0.00 0.00 2.90
7142 7247 2.838736 AGTCCTTGTTGCACAGTGTAG 58.161 47.619 1.61 0.00 0.00 2.74
7143 7248 2.170607 AGTCCTTGTTGCACAGTGTAGT 59.829 45.455 1.61 0.00 0.00 2.73
7144 7249 2.287915 GTCCTTGTTGCACAGTGTAGTG 59.712 50.000 1.61 0.00 42.37 2.74
7145 7250 2.093181 TCCTTGTTGCACAGTGTAGTGT 60.093 45.455 1.61 0.00 41.52 3.55
7152 7257 2.426651 ACAGTGTAGTGTGACGCCT 58.573 52.632 0.00 0.00 0.00 5.52
7153 7258 0.750850 ACAGTGTAGTGTGACGCCTT 59.249 50.000 0.00 0.00 0.00 4.35
7154 7259 1.269621 ACAGTGTAGTGTGACGCCTTC 60.270 52.381 0.00 0.00 0.00 3.46
7155 7260 0.039437 AGTGTAGTGTGACGCCTTCG 60.039 55.000 0.00 0.00 42.43 3.79
7166 7271 3.173240 GCCTTCGTGTCGAGCGTC 61.173 66.667 8.81 0.00 37.14 5.19
7167 7272 2.254350 CCTTCGTGTCGAGCGTCA 59.746 61.111 8.81 0.00 37.14 4.35
7168 7273 2.081212 CCTTCGTGTCGAGCGTCAC 61.081 63.158 9.59 9.59 37.14 3.67
7169 7274 1.370051 CTTCGTGTCGAGCGTCACA 60.370 57.895 17.39 1.38 37.14 3.58
7170 7275 1.597700 CTTCGTGTCGAGCGTCACAC 61.598 60.000 17.39 11.44 39.70 3.82
7171 7276 2.325666 TTCGTGTCGAGCGTCACACA 62.326 55.000 17.39 3.73 42.67 3.72
7172 7277 1.942223 CGTGTCGAGCGTCACACAA 60.942 57.895 17.39 0.00 42.67 3.33
7173 7278 1.476235 CGTGTCGAGCGTCACACAAA 61.476 55.000 17.39 0.00 42.67 2.83
7174 7279 0.648441 GTGTCGAGCGTCACACAAAA 59.352 50.000 13.68 0.00 42.20 2.44
7175 7280 1.061421 GTGTCGAGCGTCACACAAAAA 59.939 47.619 13.68 0.00 42.20 1.94
7176 7281 1.326245 TGTCGAGCGTCACACAAAAAG 59.674 47.619 0.00 0.00 0.00 2.27
7177 7282 0.934496 TCGAGCGTCACACAAAAAGG 59.066 50.000 0.00 0.00 0.00 3.11
7178 7283 0.655733 CGAGCGTCACACAAAAAGGT 59.344 50.000 0.00 0.00 0.00 3.50
7179 7284 1.332904 CGAGCGTCACACAAAAAGGTC 60.333 52.381 0.00 0.00 0.00 3.85
7180 7285 1.668751 GAGCGTCACACAAAAAGGTCA 59.331 47.619 0.00 0.00 0.00 4.02
7181 7286 1.670811 AGCGTCACACAAAAAGGTCAG 59.329 47.619 0.00 0.00 0.00 3.51
7182 7287 1.859998 GCGTCACACAAAAAGGTCAGC 60.860 52.381 0.00 0.00 0.00 4.26
7183 7288 1.268539 CGTCACACAAAAAGGTCAGCC 60.269 52.381 0.00 0.00 0.00 4.85
7184 7289 1.748493 GTCACACAAAAAGGTCAGCCA 59.252 47.619 0.00 0.00 37.19 4.75
7185 7290 1.748493 TCACACAAAAAGGTCAGCCAC 59.252 47.619 0.00 0.00 37.19 5.01
7186 7291 0.738389 ACACAAAAAGGTCAGCCACG 59.262 50.000 0.00 0.00 37.19 4.94
7187 7292 0.738389 CACAAAAAGGTCAGCCACGT 59.262 50.000 0.00 0.00 37.19 4.49
7188 7293 0.738389 ACAAAAAGGTCAGCCACGTG 59.262 50.000 9.08 9.08 37.19 4.49
7189 7294 1.021202 CAAAAAGGTCAGCCACGTGA 58.979 50.000 19.30 0.00 37.19 4.35
7190 7295 1.403679 CAAAAAGGTCAGCCACGTGAA 59.596 47.619 19.30 0.00 37.19 3.18
7191 7296 1.757682 AAAAGGTCAGCCACGTGAAA 58.242 45.000 19.30 0.00 37.19 2.69
7192 7297 1.981256 AAAGGTCAGCCACGTGAAAT 58.019 45.000 19.30 0.00 37.19 2.17
7193 7298 2.851263 AAGGTCAGCCACGTGAAATA 57.149 45.000 19.30 0.00 37.19 1.40
7194 7299 2.386661 AGGTCAGCCACGTGAAATAG 57.613 50.000 19.30 0.00 37.19 1.73
7195 7300 1.623811 AGGTCAGCCACGTGAAATAGT 59.376 47.619 19.30 0.00 37.19 2.12
7196 7301 2.038557 AGGTCAGCCACGTGAAATAGTT 59.961 45.455 19.30 0.00 37.19 2.24
7197 7302 2.812011 GGTCAGCCACGTGAAATAGTTT 59.188 45.455 19.30 0.00 34.09 2.66
7198 7303 3.364964 GGTCAGCCACGTGAAATAGTTTG 60.365 47.826 19.30 3.43 34.09 2.93
7199 7304 3.496884 GTCAGCCACGTGAAATAGTTTGA 59.503 43.478 19.30 5.68 0.00 2.69
7200 7305 3.496884 TCAGCCACGTGAAATAGTTTGAC 59.503 43.478 19.30 0.00 0.00 3.18
7206 7311 4.307834 CGTGAAATAGTTTGACGGACAG 57.692 45.455 6.54 0.00 44.58 3.51
7207 7312 3.739300 CGTGAAATAGTTTGACGGACAGT 59.261 43.478 6.54 0.00 44.58 3.55
7208 7313 4.210537 CGTGAAATAGTTTGACGGACAGTT 59.789 41.667 6.54 0.00 44.58 3.16
7209 7314 5.611844 CGTGAAATAGTTTGACGGACAGTTC 60.612 44.000 6.54 0.00 44.58 3.01
7210 7315 5.235616 GTGAAATAGTTTGACGGACAGTTCA 59.764 40.000 0.00 0.00 0.00 3.18
7211 7316 5.995282 TGAAATAGTTTGACGGACAGTTCAT 59.005 36.000 0.00 0.00 0.00 2.57
7212 7317 6.485313 TGAAATAGTTTGACGGACAGTTCATT 59.515 34.615 0.00 0.00 0.00 2.57
7213 7318 6.481954 AATAGTTTGACGGACAGTTCATTC 57.518 37.500 0.00 0.00 0.00 2.67
7214 7319 4.073293 AGTTTGACGGACAGTTCATTCT 57.927 40.909 0.00 0.00 0.00 2.40
7215 7320 3.809832 AGTTTGACGGACAGTTCATTCTG 59.190 43.478 0.00 0.00 40.80 3.02
7217 7322 2.754472 TGACGGACAGTTCATTCTGTG 58.246 47.619 4.06 0.00 46.81 3.66
7218 7323 2.364002 TGACGGACAGTTCATTCTGTGA 59.636 45.455 4.06 0.00 46.81 3.58
7219 7324 3.006859 TGACGGACAGTTCATTCTGTGAT 59.993 43.478 4.06 0.00 46.81 3.06
7220 7325 3.997021 GACGGACAGTTCATTCTGTGATT 59.003 43.478 4.06 0.00 46.81 2.57
7221 7326 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
7222 7327 4.214119 ACGGACAGTTCATTCTGTGATTTG 59.786 41.667 4.06 0.00 46.81 2.32
7223 7328 4.452114 CGGACAGTTCATTCTGTGATTTGA 59.548 41.667 4.06 0.00 46.81 2.69
7224 7329 5.122869 CGGACAGTTCATTCTGTGATTTGAT 59.877 40.000 4.06 0.00 46.81 2.57
7225 7330 6.348786 CGGACAGTTCATTCTGTGATTTGATT 60.349 38.462 4.06 0.00 46.81 2.57
7226 7331 7.373493 GGACAGTTCATTCTGTGATTTGATTT 58.627 34.615 4.06 0.00 46.81 2.17
7227 7332 7.540055 GGACAGTTCATTCTGTGATTTGATTTC 59.460 37.037 4.06 0.00 46.81 2.17
7228 7333 7.080099 ACAGTTCATTCTGTGATTTGATTTCG 58.920 34.615 0.00 0.00 45.40 3.46
7229 7334 7.080099 CAGTTCATTCTGTGATTTGATTTCGT 58.920 34.615 0.00 0.00 36.54 3.85
7230 7335 7.269937 CAGTTCATTCTGTGATTTGATTTCGTC 59.730 37.037 0.00 0.00 36.54 4.20
7231 7336 6.182039 TCATTCTGTGATTTGATTTCGTCC 57.818 37.500 0.00 0.00 0.00 4.79
7232 7337 5.704978 TCATTCTGTGATTTGATTTCGTCCA 59.295 36.000 0.00 0.00 0.00 4.02
7233 7338 5.356882 TTCTGTGATTTGATTTCGTCCAC 57.643 39.130 0.00 0.00 0.00 4.02
7234 7339 4.384940 TCTGTGATTTGATTTCGTCCACA 58.615 39.130 0.00 0.00 0.00 4.17
7235 7340 5.003160 TCTGTGATTTGATTTCGTCCACAT 58.997 37.500 0.00 0.00 33.39 3.21
7236 7341 5.045668 TGTGATTTGATTTCGTCCACATG 57.954 39.130 0.00 0.00 0.00 3.21
7237 7342 4.518590 TGTGATTTGATTTCGTCCACATGT 59.481 37.500 0.00 0.00 0.00 3.21
7238 7343 5.088739 GTGATTTGATTTCGTCCACATGTC 58.911 41.667 0.00 0.00 0.00 3.06
7239 7344 4.759183 TGATTTGATTTCGTCCACATGTCA 59.241 37.500 0.00 0.00 0.00 3.58
7240 7345 5.240403 TGATTTGATTTCGTCCACATGTCAA 59.760 36.000 0.00 0.00 0.00 3.18
7241 7346 5.703978 TTTGATTTCGTCCACATGTCAAT 57.296 34.783 0.00 0.00 0.00 2.57
7242 7347 5.703978 TTGATTTCGTCCACATGTCAATT 57.296 34.783 0.00 0.00 0.00 2.32
7243 7348 5.703978 TGATTTCGTCCACATGTCAATTT 57.296 34.783 0.00 0.00 0.00 1.82
7244 7349 6.083098 TGATTTCGTCCACATGTCAATTTT 57.917 33.333 0.00 0.00 0.00 1.82
7245 7350 5.919707 TGATTTCGTCCACATGTCAATTTTG 59.080 36.000 0.00 0.00 0.00 2.44
7246 7351 4.909696 TTCGTCCACATGTCAATTTTGT 57.090 36.364 0.00 0.00 0.00 2.83
7247 7352 4.481930 TCGTCCACATGTCAATTTTGTC 57.518 40.909 0.00 0.00 0.00 3.18
7248 7353 3.879892 TCGTCCACATGTCAATTTTGTCA 59.120 39.130 0.00 0.00 0.00 3.58
7249 7354 4.336713 TCGTCCACATGTCAATTTTGTCAA 59.663 37.500 0.00 0.00 30.60 3.18
7250 7355 5.039984 CGTCCACATGTCAATTTTGTCAAA 58.960 37.500 0.00 0.00 30.60 2.69
7251 7356 5.691305 CGTCCACATGTCAATTTTGTCAAAT 59.309 36.000 0.00 0.00 33.72 2.32
7252 7357 6.200665 CGTCCACATGTCAATTTTGTCAAATT 59.799 34.615 0.00 0.00 42.37 1.82
7253 7358 7.254387 CGTCCACATGTCAATTTTGTCAAATTT 60.254 33.333 0.00 0.00 40.09 1.82
7254 7359 9.039870 GTCCACATGTCAATTTTGTCAAATTTA 57.960 29.630 0.00 0.00 40.09 1.40
7255 7360 9.039870 TCCACATGTCAATTTTGTCAAATTTAC 57.960 29.630 0.00 0.00 40.09 2.01
7256 7361 8.281893 CCACATGTCAATTTTGTCAAATTTACC 58.718 33.333 0.00 0.00 40.09 2.85
7257 7362 8.281893 CACATGTCAATTTTGTCAAATTTACCC 58.718 33.333 0.00 0.00 40.09 3.69
7258 7363 7.443879 ACATGTCAATTTTGTCAAATTTACCCC 59.556 33.333 0.00 0.00 40.09 4.95
7259 7364 6.292150 TGTCAATTTTGTCAAATTTACCCCC 58.708 36.000 0.00 0.00 40.09 5.40
7260 7365 5.407084 GTCAATTTTGTCAAATTTACCCCCG 59.593 40.000 0.00 0.00 40.09 5.73
7261 7366 4.545208 ATTTTGTCAAATTTACCCCCGG 57.455 40.909 0.00 0.00 0.00 5.73
7262 7367 1.258676 TTGTCAAATTTACCCCCGGC 58.741 50.000 0.00 0.00 0.00 6.13
7263 7368 0.612453 TGTCAAATTTACCCCCGGCC 60.612 55.000 0.00 0.00 0.00 6.13
7264 7369 0.323999 GTCAAATTTACCCCCGGCCT 60.324 55.000 0.00 0.00 0.00 5.19
7265 7370 0.410270 TCAAATTTACCCCCGGCCTT 59.590 50.000 0.00 0.00 0.00 4.35
7266 7371 0.821517 CAAATTTACCCCCGGCCTTC 59.178 55.000 0.00 0.00 0.00 3.46
7267 7372 0.410270 AAATTTACCCCCGGCCTTCA 59.590 50.000 0.00 0.00 0.00 3.02
7268 7373 0.410270 AATTTACCCCCGGCCTTCAA 59.590 50.000 0.00 0.00 0.00 2.69
7269 7374 0.323999 ATTTACCCCCGGCCTTCAAC 60.324 55.000 0.00 0.00 0.00 3.18
7270 7375 1.428718 TTTACCCCCGGCCTTCAACT 61.429 55.000 0.00 0.00 0.00 3.16
7271 7376 1.844544 TTACCCCCGGCCTTCAACTC 61.845 60.000 0.00 0.00 0.00 3.01
7272 7377 4.778143 CCCCCGGCCTTCAACTCG 62.778 72.222 0.00 0.00 0.00 4.18
7273 7378 4.778143 CCCCGGCCTTCAACTCGG 62.778 72.222 0.00 0.00 41.90 4.63
7278 7383 3.119096 GCCTTCAACTCGGCGGTC 61.119 66.667 7.21 0.00 36.45 4.79
7279 7384 2.657237 CCTTCAACTCGGCGGTCT 59.343 61.111 7.21 0.00 0.00 3.85
7280 7385 1.738099 CCTTCAACTCGGCGGTCTG 60.738 63.158 7.21 1.55 0.00 3.51
7281 7386 2.357034 TTCAACTCGGCGGTCTGC 60.357 61.111 7.21 0.00 45.38 4.26
7282 7387 2.771763 CTTCAACTCGGCGGTCTGCT 62.772 60.000 7.21 0.00 45.43 4.24
7283 7388 2.765250 TTCAACTCGGCGGTCTGCTC 62.765 60.000 7.21 0.00 45.43 4.26
7284 7389 4.070552 AACTCGGCGGTCTGCTCC 62.071 66.667 7.21 0.00 45.43 4.70
7291 7396 4.717629 CGGTCTGCTCCGCGAACA 62.718 66.667 8.23 0.81 43.96 3.18
7292 7397 2.811317 GGTCTGCTCCGCGAACAG 60.811 66.667 8.23 12.30 0.00 3.16
7293 7398 3.482783 GTCTGCTCCGCGAACAGC 61.483 66.667 8.23 12.89 43.95 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.230913 TGTGACGGATTTATTAACCCAGAAAAA 59.769 33.333 0.00 0.00 0.00 1.94
53 54 6.811665 GGATATGCATTGATCATGGTCAAATG 59.188 38.462 24.54 21.09 41.09 2.32
57 58 4.338012 GGGATATGCATTGATCATGGTCA 58.662 43.478 4.01 4.01 32.81 4.02
146 147 6.429385 TGCAAAAGGATCAACACAAACTTTTT 59.571 30.769 0.00 0.00 36.38 1.94
147 148 5.936956 TGCAAAAGGATCAACACAAACTTTT 59.063 32.000 0.00 0.00 38.31 2.27
148 149 5.486526 TGCAAAAGGATCAACACAAACTTT 58.513 33.333 0.00 0.00 0.00 2.66
149 150 5.083533 TGCAAAAGGATCAACACAAACTT 57.916 34.783 0.00 0.00 0.00 2.66
150 151 4.402155 TCTGCAAAAGGATCAACACAAACT 59.598 37.500 0.00 0.00 0.00 2.66
151 152 4.504097 GTCTGCAAAAGGATCAACACAAAC 59.496 41.667 0.00 0.00 0.00 2.93
152 153 4.441356 GGTCTGCAAAAGGATCAACACAAA 60.441 41.667 0.00 0.00 0.00 2.83
153 154 3.068024 GGTCTGCAAAAGGATCAACACAA 59.932 43.478 0.00 0.00 0.00 3.33
154 155 2.622942 GGTCTGCAAAAGGATCAACACA 59.377 45.455 0.00 0.00 0.00 3.72
167 168 2.324330 CGCAATCGGTGGTCTGCAA 61.324 57.895 0.00 0.00 34.39 4.08
169 170 4.166011 GCGCAATCGGTGGTCTGC 62.166 66.667 0.30 0.00 35.95 4.26
204 205 5.776716 CCAAAATGCTTGATAGGGGATATGT 59.223 40.000 0.00 0.00 0.00 2.29
289 291 9.585369 TCTAGTCTGAGATAATGAGAATGATGT 57.415 33.333 0.00 0.00 0.00 3.06
316 318 3.945921 CTGCAAGATGATGAACTGGATGT 59.054 43.478 0.00 0.00 34.07 3.06
322 324 4.008330 CTGAACCTGCAAGATGATGAACT 58.992 43.478 0.00 0.00 34.07 3.01
379 381 2.100584 GTGAGAGTGGATCGCAGAAGAT 59.899 50.000 0.00 0.00 43.58 2.40
418 420 1.482182 CTTCCCATCTGTGATCGTGGA 59.518 52.381 0.00 0.00 33.53 4.02
460 462 0.395862 TTTCGGCCTTGTTGGAACCA 60.396 50.000 0.00 0.00 38.35 3.67
481 483 1.206371 CGGGGATAACTTCGGTTGTCT 59.794 52.381 5.82 0.00 42.90 3.41
511 513 2.090437 GTCCCCCTTCTCCTCCTCTAAT 60.090 54.545 0.00 0.00 0.00 1.73
533 536 3.078836 TCCCGTCATCGTTCCCCC 61.079 66.667 0.00 0.00 35.01 5.40
534 537 2.186125 GTCCCGTCATCGTTCCCC 59.814 66.667 0.00 0.00 35.01 4.81
555 558 1.144936 CCTCCCATCCAGCTTCGAC 59.855 63.158 0.00 0.00 0.00 4.20
589 611 4.674281 CCTAGACATGACCTAGGGTTTC 57.326 50.000 25.15 1.95 45.98 2.78
638 664 6.848296 GCTCGAATTCAAAATCGAAGGAATAG 59.152 38.462 6.22 0.00 46.26 1.73
647 673 3.126858 TCAAGGGCTCGAATTCAAAATCG 59.873 43.478 6.22 0.00 40.31 3.34
654 680 1.090052 CCGGTCAAGGGCTCGAATTC 61.090 60.000 0.00 0.00 0.00 2.17
655 681 1.078426 CCGGTCAAGGGCTCGAATT 60.078 57.895 0.00 0.00 0.00 2.17
656 682 1.550130 TTCCGGTCAAGGGCTCGAAT 61.550 55.000 0.00 0.00 0.00 3.34
657 683 1.760479 TTTCCGGTCAAGGGCTCGAA 61.760 55.000 0.00 0.00 0.00 3.71
659 685 1.302192 TTTTCCGGTCAAGGGCTCG 60.302 57.895 0.00 0.00 0.00 5.03
682 723 4.646877 GGACCGCCCGGAACCAAA 62.647 66.667 14.44 0.00 38.96 3.28
722 765 1.395608 ACACACAAAACTCGAACCACG 59.604 47.619 0.00 0.00 44.09 4.94
723 766 2.536130 CGACACACAAAACTCGAACCAC 60.536 50.000 0.00 0.00 0.00 4.16
766 810 2.441532 GGACGTGATCGGGGAGGA 60.442 66.667 0.00 0.00 41.85 3.71
795 839 2.653702 GAGTGAGTGAGCGTGGCT 59.346 61.111 0.00 0.00 43.88 4.75
843 890 1.460699 GAGGGTTTGGGCTCACCTT 59.539 57.895 0.00 0.00 41.11 3.50
1047 1101 4.216257 CGTGGAACAAAATCAGTGAAGGAT 59.784 41.667 0.00 0.00 44.16 3.24
1116 1170 3.553508 GGCTACTCGAATATTGGGCGTAA 60.554 47.826 0.00 0.00 0.00 3.18
1342 1400 9.157104 TCAATCAAACTTAATGAATAGCACGTA 57.843 29.630 0.00 0.00 0.00 3.57
1343 1401 8.039603 TCAATCAAACTTAATGAATAGCACGT 57.960 30.769 0.00 0.00 0.00 4.49
1344 1402 8.788813 GTTCAATCAAACTTAATGAATAGCACG 58.211 33.333 0.00 0.00 33.12 5.34
1345 1403 9.846248 AGTTCAATCAAACTTAATGAATAGCAC 57.154 29.630 0.00 0.00 36.02 4.40
1346 1404 9.844790 CAGTTCAATCAAACTTAATGAATAGCA 57.155 29.630 0.00 0.00 37.38 3.49
1347 1405 9.846248 ACAGTTCAATCAAACTTAATGAATAGC 57.154 29.630 0.00 0.00 37.38 2.97
1360 1418 9.624697 GCAAGACATAATAACAGTTCAATCAAA 57.375 29.630 0.00 0.00 0.00 2.69
1361 1419 9.013229 AGCAAGACATAATAACAGTTCAATCAA 57.987 29.630 0.00 0.00 0.00 2.57
1362 1420 8.565896 AGCAAGACATAATAACAGTTCAATCA 57.434 30.769 0.00 0.00 0.00 2.57
1363 1421 9.495754 GAAGCAAGACATAATAACAGTTCAATC 57.504 33.333 0.00 0.00 0.00 2.67
1364 1422 9.013229 TGAAGCAAGACATAATAACAGTTCAAT 57.987 29.630 0.00 0.00 0.00 2.57
1365 1423 8.389779 TGAAGCAAGACATAATAACAGTTCAA 57.610 30.769 0.00 0.00 0.00 2.69
1366 1424 7.661437 ACTGAAGCAAGACATAATAACAGTTCA 59.339 33.333 0.00 0.00 32.24 3.18
1367 1425 7.959651 CACTGAAGCAAGACATAATAACAGTTC 59.040 37.037 0.00 0.00 33.59 3.01
1368 1426 7.573843 GCACTGAAGCAAGACATAATAACAGTT 60.574 37.037 0.00 0.00 33.59 3.16
1369 1427 6.128172 GCACTGAAGCAAGACATAATAACAGT 60.128 38.462 0.00 0.00 35.70 3.55
1370 1428 6.093219 AGCACTGAAGCAAGACATAATAACAG 59.907 38.462 0.00 0.00 36.85 3.16
1371 1429 5.939883 AGCACTGAAGCAAGACATAATAACA 59.060 36.000 0.00 0.00 36.85 2.41
1372 1430 6.428385 AGCACTGAAGCAAGACATAATAAC 57.572 37.500 0.00 0.00 36.85 1.89
1373 1431 8.737168 AATAGCACTGAAGCAAGACATAATAA 57.263 30.769 0.00 0.00 36.85 1.40
1374 1432 8.206867 AGAATAGCACTGAAGCAAGACATAATA 58.793 33.333 0.00 0.00 36.85 0.98
1375 1433 7.012138 CAGAATAGCACTGAAGCAAGACATAAT 59.988 37.037 0.00 0.00 37.54 1.28
1376 1434 6.314648 CAGAATAGCACTGAAGCAAGACATAA 59.685 38.462 0.00 0.00 37.54 1.90
1377 1435 5.814188 CAGAATAGCACTGAAGCAAGACATA 59.186 40.000 0.00 0.00 37.54 2.29
1378 1436 4.634883 CAGAATAGCACTGAAGCAAGACAT 59.365 41.667 0.00 0.00 37.54 3.06
1412 1470 4.682778 AGATATGCGGCCAGTTTTACTA 57.317 40.909 2.24 0.00 0.00 1.82
1423 1481 8.662781 TCCAATATATCTTAAAGATATGCGGC 57.337 34.615 0.79 0.00 45.01 6.53
1466 1524 4.176271 GCAACTTAACTGCCAAATCCATC 58.824 43.478 0.00 0.00 33.51 3.51
1591 1657 0.178981 AGCCTGTGCACATGGAAGTT 60.179 50.000 28.64 13.92 41.13 2.66
1629 1695 4.019591 GGAAGTACTGGTACCATTTGGACT 60.020 45.833 16.75 13.38 38.94 3.85
1696 1762 9.484806 AAATTTCCTCTCCAATATTCTCAACAT 57.515 29.630 0.00 0.00 0.00 2.71
1722 1788 5.073428 TCACCAAGGTAACAATTGCACATA 58.927 37.500 5.05 0.00 41.41 2.29
1745 1811 8.708378 TGAGTGGTCATATCAAAGATACAATCT 58.292 33.333 0.00 0.00 42.61 2.40
1806 1872 2.653726 TGACAACCAGCACATGAAAGT 58.346 42.857 0.00 0.00 0.00 2.66
3935 4025 1.667830 ACCGTTCTGCATCCACACG 60.668 57.895 0.00 0.00 0.00 4.49
4247 4337 3.193691 TCGATTCAGAGTCTTCTTCACCC 59.806 47.826 0.00 0.00 0.00 4.61
4432 4522 1.133976 AGTGGACAAGTGCAAGAGCTT 60.134 47.619 0.00 0.00 42.74 3.74
4768 4858 7.981789 TCCAGAGTGACATATATGACTGAAAAC 59.018 37.037 19.63 7.04 0.00 2.43
5038 5128 6.732487 TCCAGTATATATCTCAGGTACCCAG 58.268 44.000 8.74 5.11 0.00 4.45
5158 5248 5.046087 AGCTAACGTTAACATAAGGTCCCTT 60.046 40.000 9.68 3.69 39.83 3.95
5221 5311 3.063997 GTCTTATGTGGAAAGCACATCGG 59.936 47.826 0.00 0.00 41.76 4.18
5310 5400 6.435277 AGATGTACTCTGTTGCCAAAATCAAT 59.565 34.615 0.00 0.00 31.12 2.57
5540 5630 4.855531 ACCAACAATTAACAAGAAGACGC 58.144 39.130 0.00 0.00 0.00 5.19
5555 5645 2.801342 GCGCTGAATTGGAAACCAACAA 60.801 45.455 0.00 0.00 46.95 2.83
5561 5651 0.109132 CCCAGCGCTGAATTGGAAAC 60.109 55.000 38.06 0.00 33.76 2.78
5620 5710 6.100279 TGGCTTCAGATACCAGTATCATTTCT 59.900 38.462 17.71 0.00 43.27 2.52
5681 5771 3.273434 CAGCAATACAGGAGCAGCTTTA 58.727 45.455 0.00 0.00 0.00 1.85
5796 5886 4.099573 ACCTCTGTCCCATAATGTAAGACG 59.900 45.833 0.00 0.00 0.00 4.18
6056 6148 5.362430 CAGAGATAAGCTCCTAGACCAAAGT 59.638 44.000 0.00 0.00 45.10 2.66
6064 6156 7.541162 CATCATCTTCAGAGATAAGCTCCTAG 58.459 42.308 0.00 0.00 45.10 3.02
6254 6346 1.831389 CGCCACTGTTTCAGGACGTG 61.831 60.000 0.00 0.00 35.51 4.49
6300 6392 7.235935 TGTATGTATATTAGGCCAGTGGTAC 57.764 40.000 11.74 4.37 0.00 3.34
6414 6506 3.673809 GGACAAGTAGACGATGTGACAAC 59.326 47.826 0.00 0.00 0.00 3.32
6415 6507 3.610821 CGGACAAGTAGACGATGTGACAA 60.611 47.826 0.00 0.00 0.00 3.18
6420 6512 2.434428 ACTCGGACAAGTAGACGATGT 58.566 47.619 0.00 0.00 34.60 3.06
6465 6558 4.817063 CTCCGCGCATTGCAACCG 62.817 66.667 8.75 14.88 46.97 4.44
6466 6559 2.270297 AATCTCCGCGCATTGCAACC 62.270 55.000 8.75 0.00 46.97 3.77
6467 6560 0.863119 GAATCTCCGCGCATTGCAAC 60.863 55.000 8.75 0.00 46.97 4.17
6468 6561 1.429021 GAATCTCCGCGCATTGCAA 59.571 52.632 8.75 0.00 46.97 4.08
6469 6562 2.472059 GGAATCTCCGCGCATTGCA 61.472 57.895 8.75 0.00 46.97 4.08
6470 6563 2.329339 GGAATCTCCGCGCATTGC 59.671 61.111 8.75 0.36 41.47 3.56
6508 6601 5.692115 TCAGGCATCATTTACTTAGACCA 57.308 39.130 0.00 0.00 0.00 4.02
6512 6605 9.079833 CAACATTTTCAGGCATCATTTACTTAG 57.920 33.333 0.00 0.00 0.00 2.18
6685 6779 3.002965 ACAAGTTTAGTCGCGAAAAAGGG 59.997 43.478 12.06 9.28 0.00 3.95
6693 6790 6.327177 ACATATACAACAAGTTTAGTCGCG 57.673 37.500 0.00 0.00 0.00 5.87
6775 6878 7.485913 GCAGAGCGATAGATTCATTTTGAAAAA 59.514 33.333 0.00 0.00 40.12 1.94
6790 6893 0.867753 GTGTGACGGCAGAGCGATAG 60.868 60.000 0.00 0.00 0.00 2.08
6802 6905 0.524604 TCTCGTGTGTGTGTGTGACG 60.525 55.000 0.00 0.00 0.00 4.35
6803 6906 1.635844 TTCTCGTGTGTGTGTGTGAC 58.364 50.000 0.00 0.00 0.00 3.67
6804 6907 2.595124 ATTCTCGTGTGTGTGTGTGA 57.405 45.000 0.00 0.00 0.00 3.58
6822 6926 4.314121 GTCCTCTACGTATGGTCTCGTAT 58.686 47.826 12.56 0.00 40.76 3.06
6823 6927 3.493350 GGTCCTCTACGTATGGTCTCGTA 60.493 52.174 12.56 0.00 40.70 3.43
6828 6932 1.955080 CCTGGTCCTCTACGTATGGTC 59.045 57.143 12.56 8.39 0.00 4.02
6900 7005 1.302752 GGTACCTCGGCGGGTTTTT 60.303 57.895 21.91 3.52 40.48 1.94
6901 7006 2.348620 GGTACCTCGGCGGGTTTT 59.651 61.111 21.91 1.87 40.48 2.43
6920 7025 3.782244 GACAAGGACTGCAGCGCG 61.782 66.667 15.27 0.00 0.00 6.86
6921 7026 3.782244 CGACAAGGACTGCAGCGC 61.782 66.667 15.27 0.00 0.00 5.92
6922 7027 2.819117 TAGCGACAAGGACTGCAGCG 62.819 60.000 15.27 8.51 36.27 5.18
6923 7028 1.079819 TAGCGACAAGGACTGCAGC 60.080 57.895 15.27 6.61 0.00 5.25
6924 7029 0.459237 CCTAGCGACAAGGACTGCAG 60.459 60.000 13.48 13.48 36.08 4.41
6925 7030 0.898326 TCCTAGCGACAAGGACTGCA 60.898 55.000 0.00 0.00 38.24 4.41
6926 7031 0.246635 TTCCTAGCGACAAGGACTGC 59.753 55.000 0.76 0.00 42.89 4.40
6927 7032 2.288825 TGTTTCCTAGCGACAAGGACTG 60.289 50.000 0.76 0.00 42.89 3.51
6928 7033 1.968493 TGTTTCCTAGCGACAAGGACT 59.032 47.619 0.76 0.00 42.89 3.85
6929 7034 2.067013 GTGTTTCCTAGCGACAAGGAC 58.933 52.381 0.76 0.00 42.89 3.85
6930 7035 1.689813 TGTGTTTCCTAGCGACAAGGA 59.310 47.619 0.00 0.00 41.47 3.36
6931 7036 1.798813 GTGTGTTTCCTAGCGACAAGG 59.201 52.381 0.00 0.00 35.26 3.61
6932 7037 2.755650 AGTGTGTTTCCTAGCGACAAG 58.244 47.619 0.00 0.00 0.00 3.16
6933 7038 2.902705 AGTGTGTTTCCTAGCGACAA 57.097 45.000 0.00 0.00 0.00 3.18
6934 7039 2.351060 CGTAGTGTGTTTCCTAGCGACA 60.351 50.000 0.00 0.00 0.00 4.35
6935 7040 2.248487 CGTAGTGTGTTTCCTAGCGAC 58.752 52.381 0.00 0.00 0.00 5.19
6936 7041 1.200716 CCGTAGTGTGTTTCCTAGCGA 59.799 52.381 0.00 0.00 0.00 4.93
6937 7042 1.200716 TCCGTAGTGTGTTTCCTAGCG 59.799 52.381 0.00 0.00 0.00 4.26
6938 7043 2.991866 GTTCCGTAGTGTGTTTCCTAGC 59.008 50.000 0.00 0.00 0.00 3.42
6939 7044 3.257624 AGGTTCCGTAGTGTGTTTCCTAG 59.742 47.826 0.00 0.00 0.00 3.02
6940 7045 3.006110 CAGGTTCCGTAGTGTGTTTCCTA 59.994 47.826 0.00 0.00 0.00 2.94
6941 7046 2.044758 AGGTTCCGTAGTGTGTTTCCT 58.955 47.619 0.00 0.00 0.00 3.36
6942 7047 2.140717 CAGGTTCCGTAGTGTGTTTCC 58.859 52.381 0.00 0.00 0.00 3.13
6943 7048 2.542595 CACAGGTTCCGTAGTGTGTTTC 59.457 50.000 0.00 0.00 36.39 2.78
6944 7049 2.557317 CACAGGTTCCGTAGTGTGTTT 58.443 47.619 0.00 0.00 36.39 2.83
6945 7050 1.808891 GCACAGGTTCCGTAGTGTGTT 60.809 52.381 9.53 0.00 41.94 3.32
6946 7051 0.249741 GCACAGGTTCCGTAGTGTGT 60.250 55.000 9.53 0.00 41.94 3.72
6947 7052 0.949105 GGCACAGGTTCCGTAGTGTG 60.949 60.000 11.37 8.47 42.66 3.82
6948 7053 1.370064 GGCACAGGTTCCGTAGTGT 59.630 57.895 11.37 0.00 34.59 3.55
6949 7054 1.375523 GGGCACAGGTTCCGTAGTG 60.376 63.158 0.00 0.00 35.19 2.74
6950 7055 2.939261 CGGGCACAGGTTCCGTAGT 61.939 63.158 0.00 0.00 39.04 2.73
6951 7056 1.956629 ATCGGGCACAGGTTCCGTAG 61.957 60.000 9.72 0.00 43.75 3.51
6952 7057 1.952102 GATCGGGCACAGGTTCCGTA 61.952 60.000 9.72 0.69 43.75 4.02
6953 7058 3.310860 GATCGGGCACAGGTTCCGT 62.311 63.158 9.72 0.66 43.75 4.69
6954 7059 2.511600 GATCGGGCACAGGTTCCG 60.512 66.667 0.00 0.00 44.59 4.30
6955 7060 2.511600 CGATCGGGCACAGGTTCC 60.512 66.667 7.38 0.00 0.00 3.62
6956 7061 3.195698 GCGATCGGGCACAGGTTC 61.196 66.667 18.30 0.00 0.00 3.62
6957 7062 4.778143 GGCGATCGGGCACAGGTT 62.778 66.667 18.30 0.00 41.77 3.50
6959 7064 4.899239 GAGGCGATCGGGCACAGG 62.899 72.222 18.30 0.00 45.36 4.00
6960 7065 4.899239 GGAGGCGATCGGGCACAG 62.899 72.222 18.30 0.00 45.36 3.66
6962 7067 3.757248 ATTGGAGGCGATCGGGCAC 62.757 63.158 18.30 8.44 45.36 5.01
6963 7068 3.460672 GATTGGAGGCGATCGGGCA 62.461 63.158 18.30 0.00 45.36 5.36
6964 7069 2.666526 GATTGGAGGCGATCGGGC 60.667 66.667 18.30 10.00 42.69 6.13
6965 7070 2.031163 GGATTGGAGGCGATCGGG 59.969 66.667 18.30 0.00 0.00 5.14
6966 7071 2.356313 CGGATTGGAGGCGATCGG 60.356 66.667 18.30 0.00 0.00 4.18
6967 7072 2.356313 CCGGATTGGAGGCGATCG 60.356 66.667 11.69 11.69 42.00 3.69
6968 7073 2.666526 GCCGGATTGGAGGCGATC 60.667 66.667 5.05 0.00 44.22 3.69
6982 7087 1.154035 GTCAATTTTGCCGAGGCCG 60.154 57.895 12.05 0.00 41.09 6.13
6983 7088 0.316841 TTGTCAATTTTGCCGAGGCC 59.683 50.000 12.05 0.00 41.09 5.19
6984 7089 2.147436 TTTGTCAATTTTGCCGAGGC 57.853 45.000 7.26 7.26 42.35 4.70
6985 7090 4.749099 TCAAATTTGTCAATTTTGCCGAGG 59.251 37.500 20.61 4.60 40.09 4.63
6986 7091 5.333263 GGTCAAATTTGTCAATTTTGCCGAG 60.333 40.000 20.61 5.12 40.09 4.63
6987 7092 4.509600 GGTCAAATTTGTCAATTTTGCCGA 59.490 37.500 20.61 7.82 40.09 5.54
6988 7093 4.511082 AGGTCAAATTTGTCAATTTTGCCG 59.489 37.500 20.61 5.65 40.09 5.69
6989 7094 7.671495 ATAGGTCAAATTTGTCAATTTTGCC 57.329 32.000 20.61 21.66 40.09 4.52
6990 7095 9.638239 TCTATAGGTCAAATTTGTCAATTTTGC 57.362 29.630 20.61 16.62 40.09 3.68
6992 7097 9.840427 CGTCTATAGGTCAAATTTGTCAATTTT 57.160 29.630 17.47 0.59 40.09 1.82
6993 7098 9.226606 TCGTCTATAGGTCAAATTTGTCAATTT 57.773 29.630 17.47 3.79 42.37 1.82
6994 7099 8.786826 TCGTCTATAGGTCAAATTTGTCAATT 57.213 30.769 17.47 5.14 33.72 2.32
6995 7100 8.786826 TTCGTCTATAGGTCAAATTTGTCAAT 57.213 30.769 17.47 11.49 0.00 2.57
6996 7101 8.610248 TTTCGTCTATAGGTCAAATTTGTCAA 57.390 30.769 17.47 5.31 0.00 3.18
6997 7102 8.786826 ATTTCGTCTATAGGTCAAATTTGTCA 57.213 30.769 17.47 0.00 0.00 3.58
7005 7110 9.878667 TGTGATTTAATTTCGTCTATAGGTCAA 57.121 29.630 0.00 0.00 0.00 3.18
7006 7111 9.529325 CTGTGATTTAATTTCGTCTATAGGTCA 57.471 33.333 0.00 0.00 0.00 4.02
7007 7112 9.745880 TCTGTGATTTAATTTCGTCTATAGGTC 57.254 33.333 0.00 0.00 0.00 3.85
7016 7121 9.341899 GCAGTTTATTCTGTGATTTAATTTCGT 57.658 29.630 0.00 0.00 37.70 3.85
7017 7122 8.798153 GGCAGTTTATTCTGTGATTTAATTTCG 58.202 33.333 0.00 0.00 37.70 3.46
7018 7123 9.087424 GGGCAGTTTATTCTGTGATTTAATTTC 57.913 33.333 0.00 0.00 37.70 2.17
7019 7124 7.759433 CGGGCAGTTTATTCTGTGATTTAATTT 59.241 33.333 0.00 0.00 37.70 1.82
7020 7125 7.093945 ACGGGCAGTTTATTCTGTGATTTAATT 60.094 33.333 0.00 0.00 37.70 1.40
7021 7126 6.377146 ACGGGCAGTTTATTCTGTGATTTAAT 59.623 34.615 0.00 0.00 37.70 1.40
7022 7127 5.708230 ACGGGCAGTTTATTCTGTGATTTAA 59.292 36.000 0.00 0.00 37.70 1.52
7023 7128 5.123186 CACGGGCAGTTTATTCTGTGATTTA 59.877 40.000 0.00 0.00 38.40 1.40
7024 7129 4.079253 ACGGGCAGTTTATTCTGTGATTT 58.921 39.130 0.00 0.00 37.70 2.17
7025 7130 3.440173 CACGGGCAGTTTATTCTGTGATT 59.560 43.478 0.00 0.00 38.40 2.57
7026 7131 3.009723 CACGGGCAGTTTATTCTGTGAT 58.990 45.455 0.00 0.00 38.40 3.06
7027 7132 2.037902 TCACGGGCAGTTTATTCTGTGA 59.962 45.455 0.00 0.00 41.49 3.58
7028 7133 2.422597 TCACGGGCAGTTTATTCTGTG 58.577 47.619 0.00 0.00 37.70 3.66
7029 7134 2.851263 TCACGGGCAGTTTATTCTGT 57.149 45.000 0.00 0.00 37.70 3.41
7030 7135 3.502211 AGTTTCACGGGCAGTTTATTCTG 59.498 43.478 0.00 0.00 38.35 3.02
7031 7136 3.751518 AGTTTCACGGGCAGTTTATTCT 58.248 40.909 0.00 0.00 0.00 2.40
7032 7137 5.813080 ATAGTTTCACGGGCAGTTTATTC 57.187 39.130 0.00 0.00 0.00 1.75
7033 7138 6.207810 TGAAATAGTTTCACGGGCAGTTTATT 59.792 34.615 1.24 0.00 44.21 1.40
7034 7139 5.708230 TGAAATAGTTTCACGGGCAGTTTAT 59.292 36.000 1.24 0.00 44.21 1.40
7035 7140 5.064558 TGAAATAGTTTCACGGGCAGTTTA 58.935 37.500 1.24 0.00 44.21 2.01
7036 7141 3.886505 TGAAATAGTTTCACGGGCAGTTT 59.113 39.130 1.24 0.00 44.21 2.66
7037 7142 3.482436 TGAAATAGTTTCACGGGCAGTT 58.518 40.909 1.24 0.00 44.21 3.16
7038 7143 3.134574 TGAAATAGTTTCACGGGCAGT 57.865 42.857 1.24 0.00 44.21 4.40
7046 7151 5.069318 TGTCAGCCATGTGAAATAGTTTCA 58.931 37.500 1.24 1.24 46.68 2.69
7047 7152 5.627499 TGTCAGCCATGTGAAATAGTTTC 57.373 39.130 0.00 0.00 40.08 2.78
7048 7153 6.594788 AATGTCAGCCATGTGAAATAGTTT 57.405 33.333 0.00 0.00 32.82 2.66
7049 7154 6.594788 AAATGTCAGCCATGTGAAATAGTT 57.405 33.333 0.00 0.00 32.82 2.24
7050 7155 6.594788 AAAATGTCAGCCATGTGAAATAGT 57.405 33.333 0.00 0.00 32.82 2.12
7051 7156 6.869913 ACAAAAATGTCAGCCATGTGAAATAG 59.130 34.615 0.00 0.00 32.82 1.73
7052 7157 6.645827 CACAAAAATGTCAGCCATGTGAAATA 59.354 34.615 0.00 0.00 32.82 1.40
7053 7158 5.467399 CACAAAAATGTCAGCCATGTGAAAT 59.533 36.000 0.00 0.00 32.82 2.17
7054 7159 4.809958 CACAAAAATGTCAGCCATGTGAAA 59.190 37.500 0.00 0.00 32.82 2.69
7055 7160 4.141981 ACACAAAAATGTCAGCCATGTGAA 60.142 37.500 14.77 0.00 32.82 3.18
7056 7161 3.384146 ACACAAAAATGTCAGCCATGTGA 59.616 39.130 14.77 0.00 32.82 3.58
7057 7162 3.491639 CACACAAAAATGTCAGCCATGTG 59.508 43.478 0.00 0.00 32.82 3.21
7058 7163 3.384146 TCACACAAAAATGTCAGCCATGT 59.616 39.130 0.00 0.00 32.82 3.21
7059 7164 3.737266 GTCACACAAAAATGTCAGCCATG 59.263 43.478 0.00 0.00 32.82 3.66
7060 7165 3.550639 CGTCACACAAAAATGTCAGCCAT 60.551 43.478 0.00 0.00 34.36 4.40
7061 7166 2.223456 CGTCACACAAAAATGTCAGCCA 60.223 45.455 0.00 0.00 0.00 4.75
7062 7167 2.223479 ACGTCACACAAAAATGTCAGCC 60.223 45.455 0.00 0.00 0.00 4.85
7063 7168 3.035942 GACGTCACACAAAAATGTCAGC 58.964 45.455 11.55 0.00 0.00 4.26
7064 7169 3.617669 GGACGTCACACAAAAATGTCAG 58.382 45.455 18.91 0.00 31.87 3.51
7065 7170 2.031068 CGGACGTCACACAAAAATGTCA 59.969 45.455 18.91 0.00 31.87 3.58
7066 7171 2.285756 TCGGACGTCACACAAAAATGTC 59.714 45.455 18.91 0.00 0.00 3.06
7067 7172 2.031191 GTCGGACGTCACACAAAAATGT 59.969 45.455 18.91 0.00 0.00 2.71
7068 7173 2.031068 TGTCGGACGTCACACAAAAATG 59.969 45.455 18.91 0.00 0.00 2.32
7069 7174 2.031191 GTGTCGGACGTCACACAAAAAT 59.969 45.455 25.84 0.00 42.20 1.82
7070 7175 1.394227 GTGTCGGACGTCACACAAAAA 59.606 47.619 25.84 2.94 42.20 1.94
7071 7176 1.000884 GTGTCGGACGTCACACAAAA 58.999 50.000 25.84 3.24 42.20 2.44
7072 7177 1.140999 CGTGTCGGACGTCACACAAA 61.141 55.000 28.27 6.15 42.67 2.83
7073 7178 1.586826 CGTGTCGGACGTCACACAA 60.587 57.895 28.27 10.42 42.67 3.33
7074 7179 2.025013 CGTGTCGGACGTCACACA 59.975 61.111 28.27 21.65 42.67 3.72
7090 7195 1.006571 ACACCACACTACGCCTTCG 60.007 57.895 0.00 0.00 42.43 3.79
7091 7196 0.032952 TCACACCACACTACGCCTTC 59.967 55.000 0.00 0.00 0.00 3.46
7092 7197 0.249741 GTCACACCACACTACGCCTT 60.250 55.000 0.00 0.00 0.00 4.35
7093 7198 1.366366 GTCACACCACACTACGCCT 59.634 57.895 0.00 0.00 0.00 5.52
7094 7199 2.019951 CGTCACACCACACTACGCC 61.020 63.158 0.00 0.00 0.00 5.68
7095 7200 3.534160 CGTCACACCACACTACGC 58.466 61.111 0.00 0.00 0.00 4.42
7096 7201 2.019951 GGCGTCACACCACACTACG 61.020 63.158 0.00 0.00 36.67 3.51
7097 7202 0.249741 AAGGCGTCACACCACACTAC 60.250 55.000 0.00 0.00 0.00 2.73
7098 7203 0.032952 GAAGGCGTCACACCACACTA 59.967 55.000 0.00 0.00 0.00 2.74
7099 7204 1.227556 GAAGGCGTCACACCACACT 60.228 57.895 0.00 0.00 0.00 3.55
7100 7205 2.594962 CGAAGGCGTCACACCACAC 61.595 63.158 0.55 0.00 0.00 3.82
7101 7206 2.279851 CGAAGGCGTCACACCACA 60.280 61.111 0.55 0.00 0.00 4.17
7111 7216 0.038526 ACAAGGACTACACGAAGGCG 60.039 55.000 0.00 0.00 44.79 5.52
7112 7217 1.798813 CAACAAGGACTACACGAAGGC 59.201 52.381 0.00 0.00 0.00 4.35
7113 7218 1.798813 GCAACAAGGACTACACGAAGG 59.201 52.381 0.00 0.00 0.00 3.46
7114 7219 2.221055 GTGCAACAAGGACTACACGAAG 59.779 50.000 0.00 0.00 35.41 3.79
7115 7220 2.206750 GTGCAACAAGGACTACACGAA 58.793 47.619 0.00 0.00 35.41 3.85
7116 7221 1.860676 GTGCAACAAGGACTACACGA 58.139 50.000 0.00 0.00 35.41 4.35
7129 7234 1.257936 CGTCACACTACACTGTGCAAC 59.742 52.381 7.90 0.00 41.27 4.17
7130 7235 1.566404 CGTCACACTACACTGTGCAA 58.434 50.000 7.90 0.00 41.27 4.08
7131 7236 0.874175 GCGTCACACTACACTGTGCA 60.874 55.000 7.90 0.00 41.27 4.57
7132 7237 1.557443 GGCGTCACACTACACTGTGC 61.557 60.000 7.90 0.00 41.27 4.57
7133 7238 0.032130 AGGCGTCACACTACACTGTG 59.968 55.000 6.19 6.19 42.62 3.66
7134 7239 0.750850 AAGGCGTCACACTACACTGT 59.249 50.000 0.00 0.00 0.00 3.55
7135 7240 1.419374 GAAGGCGTCACACTACACTG 58.581 55.000 0.00 0.00 0.00 3.66
7136 7241 0.039437 CGAAGGCGTCACACTACACT 60.039 55.000 0.55 0.00 0.00 3.55
7137 7242 2.431539 CGAAGGCGTCACACTACAC 58.568 57.895 0.55 0.00 0.00 2.90
7138 7243 4.957266 CGAAGGCGTCACACTACA 57.043 55.556 0.55 0.00 0.00 2.74
7149 7254 3.173240 GACGCTCGACACGAAGGC 61.173 66.667 9.87 0.00 34.74 4.35
7150 7255 2.081212 GTGACGCTCGACACGAAGG 61.081 63.158 9.87 0.00 34.74 3.46
7151 7256 1.370051 TGTGACGCTCGACACGAAG 60.370 57.895 16.82 0.00 42.06 3.79
7152 7257 1.656263 GTGTGACGCTCGACACGAA 60.656 57.895 16.82 1.73 42.06 3.85
7153 7258 2.051614 GTGTGACGCTCGACACGA 60.052 61.111 16.82 6.64 42.06 4.35
7154 7259 1.476235 TTTGTGTGACGCTCGACACG 61.476 55.000 16.82 1.72 44.55 4.49
7155 7260 0.648441 TTTTGTGTGACGCTCGACAC 59.352 50.000 15.58 15.58 42.40 3.67
7156 7261 1.326245 CTTTTTGTGTGACGCTCGACA 59.674 47.619 0.00 0.00 0.00 4.35
7157 7262 1.332904 CCTTTTTGTGTGACGCTCGAC 60.333 52.381 0.00 0.00 0.00 4.20
7158 7263 0.934496 CCTTTTTGTGTGACGCTCGA 59.066 50.000 0.00 0.00 0.00 4.04
7159 7264 0.655733 ACCTTTTTGTGTGACGCTCG 59.344 50.000 0.00 0.00 0.00 5.03
7160 7265 1.668751 TGACCTTTTTGTGTGACGCTC 59.331 47.619 0.00 0.00 0.00 5.03
7161 7266 1.670811 CTGACCTTTTTGTGTGACGCT 59.329 47.619 0.00 0.00 0.00 5.07
7162 7267 1.859998 GCTGACCTTTTTGTGTGACGC 60.860 52.381 0.00 0.00 0.00 5.19
7163 7268 1.268539 GGCTGACCTTTTTGTGTGACG 60.269 52.381 0.00 0.00 0.00 4.35
7164 7269 1.748493 TGGCTGACCTTTTTGTGTGAC 59.252 47.619 0.00 0.00 36.63 3.67
7165 7270 1.748493 GTGGCTGACCTTTTTGTGTGA 59.252 47.619 0.00 0.00 36.63 3.58
7166 7271 1.533756 CGTGGCTGACCTTTTTGTGTG 60.534 52.381 0.00 0.00 36.63 3.82
7167 7272 0.738389 CGTGGCTGACCTTTTTGTGT 59.262 50.000 0.00 0.00 36.63 3.72
7168 7273 0.738389 ACGTGGCTGACCTTTTTGTG 59.262 50.000 0.00 0.00 36.63 3.33
7169 7274 0.738389 CACGTGGCTGACCTTTTTGT 59.262 50.000 7.95 0.00 36.63 2.83
7170 7275 1.021202 TCACGTGGCTGACCTTTTTG 58.979 50.000 17.00 0.00 36.63 2.44
7171 7276 1.757682 TTCACGTGGCTGACCTTTTT 58.242 45.000 17.00 0.00 36.63 1.94
7172 7277 1.757682 TTTCACGTGGCTGACCTTTT 58.242 45.000 17.00 0.00 36.63 2.27
7173 7278 1.981256 ATTTCACGTGGCTGACCTTT 58.019 45.000 17.00 0.00 36.63 3.11
7174 7279 2.038557 ACTATTTCACGTGGCTGACCTT 59.961 45.455 17.00 0.00 36.63 3.50
7175 7280 1.623811 ACTATTTCACGTGGCTGACCT 59.376 47.619 17.00 0.00 36.63 3.85
7176 7281 2.094762 ACTATTTCACGTGGCTGACC 57.905 50.000 17.00 0.00 0.00 4.02
7177 7282 3.496884 TCAAACTATTTCACGTGGCTGAC 59.503 43.478 17.00 0.00 0.00 3.51
7178 7283 3.496884 GTCAAACTATTTCACGTGGCTGA 59.503 43.478 17.00 3.20 0.00 4.26
7179 7284 3.664276 CGTCAAACTATTTCACGTGGCTG 60.664 47.826 17.00 4.69 0.00 4.85
7180 7285 2.478894 CGTCAAACTATTTCACGTGGCT 59.521 45.455 17.00 3.17 0.00 4.75
7181 7286 2.412325 CCGTCAAACTATTTCACGTGGC 60.412 50.000 17.00 0.00 0.00 5.01
7182 7287 3.061322 TCCGTCAAACTATTTCACGTGG 58.939 45.455 17.00 0.90 0.00 4.94
7183 7288 3.491639 TGTCCGTCAAACTATTTCACGTG 59.508 43.478 9.94 9.94 0.00 4.49
7184 7289 3.719924 TGTCCGTCAAACTATTTCACGT 58.280 40.909 0.00 0.00 0.00 4.49
7185 7290 3.739300 ACTGTCCGTCAAACTATTTCACG 59.261 43.478 0.00 0.00 0.00 4.35
7186 7291 5.235616 TGAACTGTCCGTCAAACTATTTCAC 59.764 40.000 0.00 0.00 0.00 3.18
7187 7292 5.361427 TGAACTGTCCGTCAAACTATTTCA 58.639 37.500 0.00 0.00 0.00 2.69
7188 7293 5.917541 TGAACTGTCCGTCAAACTATTTC 57.082 39.130 0.00 0.00 0.00 2.17
7189 7294 6.710744 AGAATGAACTGTCCGTCAAACTATTT 59.289 34.615 0.00 0.00 0.00 1.40
7190 7295 6.147821 CAGAATGAACTGTCCGTCAAACTATT 59.852 38.462 0.00 0.00 39.69 1.73
7191 7296 5.639506 CAGAATGAACTGTCCGTCAAACTAT 59.360 40.000 0.00 0.00 39.69 2.12
7192 7297 4.988540 CAGAATGAACTGTCCGTCAAACTA 59.011 41.667 0.00 0.00 39.69 2.24
7193 7298 3.809832 CAGAATGAACTGTCCGTCAAACT 59.190 43.478 0.00 0.00 39.69 2.66
7194 7299 3.560068 ACAGAATGAACTGTCCGTCAAAC 59.440 43.478 0.00 0.00 46.36 2.93
7195 7300 3.804036 ACAGAATGAACTGTCCGTCAAA 58.196 40.909 0.00 0.00 46.36 2.69
7196 7301 3.469008 ACAGAATGAACTGTCCGTCAA 57.531 42.857 0.00 0.00 46.36 3.18
7204 7309 7.080099 ACGAAATCAAATCACAGAATGAACTG 58.920 34.615 0.00 0.00 41.93 3.16
7205 7310 7.206981 ACGAAATCAAATCACAGAATGAACT 57.793 32.000 0.00 0.00 41.93 3.01
7206 7311 6.524586 GGACGAAATCAAATCACAGAATGAAC 59.475 38.462 0.00 0.00 41.93 3.18
7207 7312 6.206438 TGGACGAAATCAAATCACAGAATGAA 59.794 34.615 0.00 0.00 41.93 2.57
7208 7313 5.704978 TGGACGAAATCAAATCACAGAATGA 59.295 36.000 0.00 0.00 43.13 2.57
7209 7314 5.796935 GTGGACGAAATCAAATCACAGAATG 59.203 40.000 0.00 0.00 46.00 2.67
7210 7315 5.473162 TGTGGACGAAATCAAATCACAGAAT 59.527 36.000 0.00 0.00 31.29 2.40
7211 7316 4.819088 TGTGGACGAAATCAAATCACAGAA 59.181 37.500 0.00 0.00 31.29 3.02
7212 7317 4.384940 TGTGGACGAAATCAAATCACAGA 58.615 39.130 0.00 0.00 31.29 3.41
7213 7318 4.747540 TGTGGACGAAATCAAATCACAG 57.252 40.909 0.00 0.00 31.29 3.66
7214 7319 4.518590 ACATGTGGACGAAATCAAATCACA 59.481 37.500 0.00 0.00 37.91 3.58
7215 7320 5.046910 ACATGTGGACGAAATCAAATCAC 57.953 39.130 0.00 0.00 0.00 3.06
7216 7321 4.759183 TGACATGTGGACGAAATCAAATCA 59.241 37.500 1.15 0.00 0.00 2.57
7217 7322 5.295431 TGACATGTGGACGAAATCAAATC 57.705 39.130 1.15 0.00 0.00 2.17
7218 7323 5.703978 TTGACATGTGGACGAAATCAAAT 57.296 34.783 1.15 0.00 0.00 2.32
7219 7324 5.703978 ATTGACATGTGGACGAAATCAAA 57.296 34.783 1.15 0.00 0.00 2.69
7220 7325 5.703978 AATTGACATGTGGACGAAATCAA 57.296 34.783 1.15 0.00 0.00 2.57
7221 7326 5.703978 AAATTGACATGTGGACGAAATCA 57.296 34.783 1.15 0.00 0.00 2.57
7222 7327 5.920273 ACAAAATTGACATGTGGACGAAATC 59.080 36.000 1.15 0.00 0.00 2.17
7223 7328 5.841810 ACAAAATTGACATGTGGACGAAAT 58.158 33.333 1.15 0.00 0.00 2.17
7224 7329 5.163612 TGACAAAATTGACATGTGGACGAAA 60.164 36.000 1.15 0.00 0.00 3.46
7225 7330 4.336713 TGACAAAATTGACATGTGGACGAA 59.663 37.500 1.15 0.00 0.00 3.85
7226 7331 3.879892 TGACAAAATTGACATGTGGACGA 59.120 39.130 1.15 0.00 0.00 4.20
7227 7332 4.221926 TGACAAAATTGACATGTGGACG 57.778 40.909 1.15 0.00 0.00 4.79
7228 7333 7.481275 AATTTGACAAAATTGACATGTGGAC 57.519 32.000 1.15 0.00 42.97 4.02
7229 7334 9.039870 GTAAATTTGACAAAATTGACATGTGGA 57.960 29.630 1.15 0.00 43.63 4.02
7230 7335 8.281893 GGTAAATTTGACAAAATTGACATGTGG 58.718 33.333 1.15 0.00 44.34 4.17
7231 7336 8.281893 GGGTAAATTTGACAAAATTGACATGTG 58.718 33.333 1.15 0.00 44.34 3.21
7232 7337 7.443879 GGGGTAAATTTGACAAAATTGACATGT 59.556 33.333 10.81 0.00 44.34 3.21
7233 7338 7.094848 GGGGGTAAATTTGACAAAATTGACATG 60.095 37.037 10.81 0.00 44.34 3.21
7234 7339 6.939730 GGGGGTAAATTTGACAAAATTGACAT 59.060 34.615 10.81 0.00 44.34 3.06
7235 7340 6.292150 GGGGGTAAATTTGACAAAATTGACA 58.708 36.000 10.81 0.00 44.34 3.58
7236 7341 5.407084 CGGGGGTAAATTTGACAAAATTGAC 59.593 40.000 10.81 6.50 43.63 3.18
7237 7342 5.511545 CCGGGGGTAAATTTGACAAAATTGA 60.512 40.000 10.81 0.00 43.63 2.57
7238 7343 4.693095 CCGGGGGTAAATTTGACAAAATTG 59.307 41.667 10.81 0.00 43.63 2.32
7239 7344 4.804597 GCCGGGGGTAAATTTGACAAAATT 60.805 41.667 2.18 5.58 45.81 1.82
7240 7345 3.307129 GCCGGGGGTAAATTTGACAAAAT 60.307 43.478 2.18 0.00 37.61 1.82
7241 7346 2.037381 GCCGGGGGTAAATTTGACAAAA 59.963 45.455 2.18 0.00 0.00 2.44
7242 7347 1.619332 GCCGGGGGTAAATTTGACAAA 59.381 47.619 2.18 2.48 0.00 2.83
7243 7348 1.258676 GCCGGGGGTAAATTTGACAA 58.741 50.000 2.18 0.00 0.00 3.18
7244 7349 0.612453 GGCCGGGGGTAAATTTGACA 60.612 55.000 2.18 0.00 0.00 3.58
7245 7350 0.323999 AGGCCGGGGGTAAATTTGAC 60.324 55.000 2.18 0.00 0.00 3.18
7246 7351 0.410270 AAGGCCGGGGGTAAATTTGA 59.590 50.000 2.18 0.00 0.00 2.69
7247 7352 0.821517 GAAGGCCGGGGGTAAATTTG 59.178 55.000 2.18 0.00 0.00 2.32
7248 7353 0.410270 TGAAGGCCGGGGGTAAATTT 59.590 50.000 2.18 0.00 0.00 1.82
7249 7354 0.410270 TTGAAGGCCGGGGGTAAATT 59.590 50.000 2.18 0.00 0.00 1.82
7250 7355 0.323999 GTTGAAGGCCGGGGGTAAAT 60.324 55.000 2.18 0.00 0.00 1.40
7251 7356 1.075305 GTTGAAGGCCGGGGGTAAA 59.925 57.895 2.18 0.00 0.00 2.01
7252 7357 1.844544 GAGTTGAAGGCCGGGGGTAA 61.845 60.000 2.18 0.00 0.00 2.85
7253 7358 2.204029 AGTTGAAGGCCGGGGGTA 60.204 61.111 2.18 0.00 0.00 3.69
7254 7359 3.647771 GAGTTGAAGGCCGGGGGT 61.648 66.667 2.18 0.00 0.00 4.95
7255 7360 4.778143 CGAGTTGAAGGCCGGGGG 62.778 72.222 2.18 0.00 0.00 5.40
7256 7361 4.778143 CCGAGTTGAAGGCCGGGG 62.778 72.222 2.18 0.00 38.42 5.73
7262 7367 1.738099 CAGACCGCCGAGTTGAAGG 60.738 63.158 0.00 0.00 0.00 3.46
7263 7368 2.383527 GCAGACCGCCGAGTTGAAG 61.384 63.158 0.00 0.00 32.94 3.02
7264 7369 2.357034 GCAGACCGCCGAGTTGAA 60.357 61.111 0.00 0.00 32.94 2.69
7265 7370 3.282745 GAGCAGACCGCCGAGTTGA 62.283 63.158 0.00 0.00 44.04 3.18
7266 7371 2.811317 GAGCAGACCGCCGAGTTG 60.811 66.667 0.00 0.00 44.04 3.16
7267 7372 4.070552 GGAGCAGACCGCCGAGTT 62.071 66.667 0.00 0.00 44.04 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.