Multiple sequence alignment - TraesCS3D01G227900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G227900 chr3D 100.000 7231 0 0 1 7231 309911643 309918873 0.000000e+00 13354.0
1 TraesCS3D01G227900 chr3D 93.536 263 15 2 5117 5379 514289276 514289016 2.450000e-104 390.0
2 TraesCS3D01G227900 chr3B 96.834 5085 105 16 5 5077 411427997 411422957 0.000000e+00 8447.0
3 TraesCS3D01G227900 chr3B 93.722 1561 55 25 5374 6920 411422947 411421416 0.000000e+00 2300.0
4 TraesCS3D01G227900 chr3B 90.868 219 17 1 6717 6935 411421404 411421189 2.550000e-74 291.0
5 TraesCS3D01G227900 chr3B 95.370 108 5 0 6900 7007 411421190 411421083 9.640000e-39 172.0
6 TraesCS3D01G227900 chr3A 93.442 2211 83 24 1 2192 422917449 422915282 0.000000e+00 3223.0
7 TraesCS3D01G227900 chr3A 98.653 1559 20 1 2289 3847 422915281 422913724 0.000000e+00 2761.0
8 TraesCS3D01G227900 chr3A 92.382 1549 85 17 5374 6901 422910595 422909059 0.000000e+00 2176.0
9 TraesCS3D01G227900 chr3A 96.421 922 28 3 3837 4757 422912004 422911087 0.000000e+00 1515.0
10 TraesCS3D01G227900 chr3A 98.462 325 4 1 4753 5077 422910928 422910605 8.140000e-159 571.0
11 TraesCS3D01G227900 chr5B 86.816 1608 172 19 2303 3896 12573011 12574592 0.000000e+00 1759.0
12 TraesCS3D01G227900 chr5B 83.082 1395 174 33 847 2194 12571623 12573002 0.000000e+00 1212.0
13 TraesCS3D01G227900 chr5B 85.559 644 82 10 5607 6242 12576795 12577435 0.000000e+00 664.0
14 TraesCS3D01G227900 chr5B 82.809 413 59 8 4548 4955 12575818 12576223 6.900000e-95 359.0
15 TraesCS3D01G227900 chr5B 82.535 355 41 13 4151 4502 12575170 12575506 7.100000e-75 292.0
16 TraesCS3D01G227900 chr5D 87.828 1487 149 14 2336 3811 12226554 12225089 0.000000e+00 1714.0
17 TraesCS3D01G227900 chr5D 83.486 872 99 23 5394 6242 12223357 12222508 0.000000e+00 771.0
18 TraesCS3D01G227900 chr5D 83.626 684 87 18 1494 2163 12227276 12226604 2.870000e-173 619.0
19 TraesCS3D01G227900 chr5D 85.587 562 56 19 853 1398 12227827 12227275 3.790000e-157 566.0
20 TraesCS3D01G227900 chr5D 83.524 613 81 13 5647 6242 12174943 12174334 8.200000e-154 555.0
21 TraesCS3D01G227900 chr5D 79.708 823 109 36 4151 4955 12224778 12223996 6.380000e-150 542.0
22 TraesCS3D01G227900 chr5D 96.911 259 8 0 5118 5376 15347034 15346776 1.110000e-117 435.0
23 TraesCS3D01G227900 chr5D 94.981 259 13 0 5118 5376 11244605 11244347 2.430000e-109 407.0
24 TraesCS3D01G227900 chr5D 94.253 261 14 1 5118 5378 7251744 7251485 1.460000e-106 398.0
25 TraesCS3D01G227900 chr5D 79.176 461 67 15 4512 4955 12215583 12215135 7.100000e-75 292.0
26 TraesCS3D01G227900 chr5D 79.775 356 48 12 4150 4502 12215973 12215639 3.370000e-58 237.0
27 TraesCS3D01G227900 chr5D 83.803 142 21 2 4154 4293 12165909 12165768 4.550000e-27 134.0
28 TraesCS3D01G227900 chr5A 86.078 1609 182 23 2303 3896 9614488 9612907 0.000000e+00 1692.0
29 TraesCS3D01G227900 chr5A 84.010 838 108 16 1379 2197 9615324 9614494 0.000000e+00 782.0
30 TraesCS3D01G227900 chr5A 82.857 875 104 24 5392 6242 9611506 9610654 0.000000e+00 743.0
31 TraesCS3D01G227900 chr5A 80.292 822 116 31 4151 4955 9612702 9611910 4.860000e-161 579.0
32 TraesCS3D01G227900 chr5A 86.248 509 56 10 853 1350 9615891 9615386 2.300000e-149 540.0
33 TraesCS3D01G227900 chr5A 81.490 416 55 13 4548 4955 9608411 9608010 9.050000e-84 322.0
34 TraesCS3D01G227900 chr5A 87.500 232 26 3 5676 5904 9607827 9607596 1.550000e-66 265.0
35 TraesCS3D01G227900 chr5A 81.073 354 48 13 4150 4502 9608844 9608509 1.550000e-66 265.0
36 TraesCS3D01G227900 chr7D 98.473 262 3 1 5117 5378 579141127 579141387 1.840000e-125 460.0
37 TraesCS3D01G227900 chr7D 94.981 259 12 1 5117 5375 4729564 4729307 8.730000e-109 405.0
38 TraesCS3D01G227900 chr7D 91.150 113 6 4 2182 2292 478795308 478795418 4.520000e-32 150.0
39 TraesCS3D01G227900 chr7D 83.766 154 17 8 2180 2327 57100435 57100284 9.780000e-29 139.0
40 TraesCS3D01G227900 chr1D 98.419 253 4 0 5117 5369 481719400 481719652 5.150000e-121 446.0
41 TraesCS3D01G227900 chr1D 98.326 239 3 1 5139 5376 4236202 4236440 1.120000e-112 418.0
42 TraesCS3D01G227900 chr1D 92.453 106 6 1 2192 2295 483907679 483907574 4.520000e-32 150.0
43 TraesCS3D01G227900 chr2A 92.780 277 17 3 5118 5394 715297425 715297698 1.460000e-106 398.0
44 TraesCS3D01G227900 chr2A 87.705 122 13 2 2176 2295 728602681 728602560 2.720000e-29 141.0
45 TraesCS3D01G227900 chr7A 89.354 263 16 4 5115 5377 730746087 730746337 3.250000e-83 320.0
46 TraesCS3D01G227900 chr6B 94.175 103 6 0 2190 2292 424084089 424084191 2.700000e-34 158.0
47 TraesCS3D01G227900 chr6B 94.175 103 6 0 2190 2292 424306787 424306889 2.700000e-34 158.0
48 TraesCS3D01G227900 chr1B 90.598 117 10 1 2179 2294 359902034 359902150 3.490000e-33 154.0
49 TraesCS3D01G227900 chr7B 92.453 106 8 0 2187 2292 747370734 747370629 1.260000e-32 152.0
50 TraesCS3D01G227900 chr7B 90.909 44 4 0 6486 6529 649116791 649116834 7.830000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G227900 chr3D 309911643 309918873 7230 False 13354.0 13354 100.0000 1 7231 1 chr3D.!!$F1 7230
1 TraesCS3D01G227900 chr3B 411421083 411427997 6914 True 2802.5 8447 94.1985 5 7007 4 chr3B.!!$R1 7002
2 TraesCS3D01G227900 chr3A 422909059 422917449 8390 True 2049.2 3223 95.8720 1 6901 5 chr3A.!!$R1 6900
3 TraesCS3D01G227900 chr5B 12571623 12577435 5812 False 857.2 1759 84.1602 847 6242 5 chr5B.!!$F1 5395
4 TraesCS3D01G227900 chr5D 12222508 12227827 5319 True 842.4 1714 84.0470 853 6242 5 chr5D.!!$R7 5389
5 TraesCS3D01G227900 chr5D 12174334 12174943 609 True 555.0 555 83.5240 5647 6242 1 chr5D.!!$R4 595
6 TraesCS3D01G227900 chr5D 12215135 12215973 838 True 264.5 292 79.4755 4150 4955 2 chr5D.!!$R6 805
7 TraesCS3D01G227900 chr5A 9607596 9615891 8295 True 648.5 1692 83.6935 853 6242 8 chr5A.!!$R1 5389

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.035317 ATGGTGAGTTCGCTTGCTCA 59.965 50.000 0.00 0.0 39.17 4.26 F
331 337 0.109532 TGTGGTTCCTGCGGATTTGA 59.890 50.000 0.00 0.0 0.00 2.69 F
356 362 0.469144 ATTTTGTGCTCCGGTTGGGT 60.469 50.000 0.00 0.0 37.00 4.51 F
357 363 0.684805 TTTTGTGCTCCGGTTGGGTT 60.685 50.000 0.00 0.0 37.00 4.11 F
358 364 1.388065 TTTGTGCTCCGGTTGGGTTG 61.388 55.000 0.00 0.0 37.00 3.77 F
2356 2481 1.069636 GCCTGCGTTTTTCTCTCTGTG 60.070 52.381 0.00 0.0 0.00 3.66 F
3091 3216 2.643551 CTGGGGACGTTTTGCATAGAT 58.356 47.619 0.00 0.0 0.00 1.98 F
5146 8476 0.949105 AATAGCCCGCGAAATAGCCG 60.949 55.000 8.23 0.0 0.00 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1080 1120 0.449388 GGCTGCAATTCTGAAGGACG 59.551 55.000 0.50 0.00 0.00 4.79 R
2138 2250 3.064900 AGCCAGACTTCAAGGAACATC 57.935 47.619 0.00 0.00 0.00 3.06 R
2260 2373 4.096382 CCTCCGTCCCAAAATAAATGTCTG 59.904 45.833 0.00 0.00 0.00 3.51 R
2356 2481 0.607489 AGCCAGCATCACAAGACCAC 60.607 55.000 0.00 0.00 0.00 4.16 R
2475 2600 4.721776 TCTTCAGCAGGGTTATTCAGGTAT 59.278 41.667 0.00 0.00 0.00 2.73 R
3847 4006 2.080286 ACAGTGCTGGTTCGATGTAC 57.920 50.000 4.11 0.00 34.19 2.90 R
5172 8502 0.250081 ATAGCTTAGCGGCAAGGCTC 60.250 55.000 14.64 0.52 43.54 4.70 R
7199 10829 0.028505 GCTACGAGCAATGCATGGTG 59.971 55.000 8.35 0.00 41.89 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
121 122 1.081376 CAGCAGCAGCAACTGAAGC 60.081 57.895 3.17 1.44 45.49 3.86
181 182 0.035317 ATGGTGAGTTCGCTTGCTCA 59.965 50.000 0.00 0.00 39.17 4.26
259 264 2.086510 CCGACGTGTGGCTAATTGG 58.913 57.895 0.00 0.00 0.00 3.16
281 286 1.448540 CGTTTCGCTGGATCAGGCT 60.449 57.895 0.00 0.00 31.21 4.58
282 287 1.021390 CGTTTCGCTGGATCAGGCTT 61.021 55.000 0.00 0.00 31.21 4.35
284 289 2.356135 GTTTCGCTGGATCAGGCTTTA 58.644 47.619 0.00 0.00 31.21 1.85
285 290 2.945668 GTTTCGCTGGATCAGGCTTTAT 59.054 45.455 0.00 0.00 31.21 1.40
331 337 0.109532 TGTGGTTCCTGCGGATTTGA 59.890 50.000 0.00 0.00 0.00 2.69
336 342 2.617021 GGTTCCTGCGGATTTGAGGTTA 60.617 50.000 0.00 0.00 0.00 2.85
349 355 4.497473 TTGAGGTTAATTTTGTGCTCCG 57.503 40.909 0.00 0.00 0.00 4.63
350 356 2.817258 TGAGGTTAATTTTGTGCTCCGG 59.183 45.455 0.00 0.00 0.00 5.14
351 357 2.817844 GAGGTTAATTTTGTGCTCCGGT 59.182 45.455 0.00 0.00 0.00 5.28
352 358 3.227614 AGGTTAATTTTGTGCTCCGGTT 58.772 40.909 0.00 0.00 0.00 4.44
353 359 3.005367 AGGTTAATTTTGTGCTCCGGTTG 59.995 43.478 0.00 0.00 0.00 3.77
354 360 3.313690 GTTAATTTTGTGCTCCGGTTGG 58.686 45.455 0.00 0.00 0.00 3.77
355 361 0.678950 AATTTTGTGCTCCGGTTGGG 59.321 50.000 0.00 0.00 35.24 4.12
356 362 0.469144 ATTTTGTGCTCCGGTTGGGT 60.469 50.000 0.00 0.00 37.00 4.51
357 363 0.684805 TTTTGTGCTCCGGTTGGGTT 60.685 50.000 0.00 0.00 37.00 4.11
358 364 1.388065 TTTGTGCTCCGGTTGGGTTG 61.388 55.000 0.00 0.00 37.00 3.77
359 365 2.983592 GTGCTCCGGTTGGGTTGG 60.984 66.667 0.00 0.00 37.00 3.77
360 366 4.278513 TGCTCCGGTTGGGTTGGG 62.279 66.667 0.00 0.00 37.00 4.12
361 367 4.280019 GCTCCGGTTGGGTTGGGT 62.280 66.667 0.00 0.00 37.00 4.51
362 368 2.518933 CTCCGGTTGGGTTGGGTT 59.481 61.111 0.00 0.00 37.00 4.11
363 369 1.901464 CTCCGGTTGGGTTGGGTTG 60.901 63.158 0.00 0.00 37.00 3.77
517 537 3.395639 TGGCTTAGTTTGGACGTTACAG 58.604 45.455 0.00 0.00 0.00 2.74
584 604 2.430694 GTTGGTAGGCAATCCCCATTTC 59.569 50.000 0.00 0.00 0.00 2.17
586 606 2.247111 TGGTAGGCAATCCCCATTTCAT 59.753 45.455 0.00 0.00 0.00 2.57
605 625 4.385825 TCATGGATTTAATAGGGTGCGTC 58.614 43.478 0.00 0.00 0.00 5.19
727 760 3.960755 TGTCGAGGAATCCATATGTCAGT 59.039 43.478 0.61 0.00 0.00 3.41
736 769 7.935755 AGGAATCCATATGTCAGTCAACATAAG 59.064 37.037 0.61 0.00 43.40 1.73
761 794 2.515926 TCATGCTCAATAGGTCTCGC 57.484 50.000 0.00 0.00 0.00 5.03
789 822 7.392953 TGCTCATAATGTGTTCATGTAAAGGAA 59.607 33.333 0.00 0.00 34.19 3.36
817 850 5.105554 AGTGAAATTGTGTTGCCACTGTTTA 60.106 36.000 0.00 0.00 42.34 2.01
819 852 6.257630 GTGAAATTGTGTTGCCACTGTTTATT 59.742 34.615 0.00 0.00 42.34 1.40
820 853 6.820656 TGAAATTGTGTTGCCACTGTTTATTT 59.179 30.769 0.00 0.00 42.34 1.40
821 854 7.981789 TGAAATTGTGTTGCCACTGTTTATTTA 59.018 29.630 0.00 0.00 42.34 1.40
822 855 8.900983 AAATTGTGTTGCCACTGTTTATTTAT 57.099 26.923 0.00 0.00 42.34 1.40
823 856 8.900983 AATTGTGTTGCCACTGTTTATTTATT 57.099 26.923 0.00 0.00 42.34 1.40
824 857 8.900983 ATTGTGTTGCCACTGTTTATTTATTT 57.099 26.923 0.00 0.00 42.34 1.40
825 858 8.723942 TTGTGTTGCCACTGTTTATTTATTTT 57.276 26.923 0.00 0.00 42.34 1.82
826 859 9.817809 TTGTGTTGCCACTGTTTATTTATTTTA 57.182 25.926 0.00 0.00 42.34 1.52
889 922 6.834876 TGCATCATTATGATAGAATGTTCGC 58.165 36.000 7.44 4.65 34.28 4.70
901 934 8.609176 TGATAGAATGTTCGCCTATTTTGTAAC 58.391 33.333 0.00 0.00 0.00 2.50
929 964 5.050490 TCTCTTCTCTTTTGCAGTGTACAC 58.950 41.667 18.56 18.56 0.00 2.90
1022 1062 1.390565 GAGGCATCATCTTGCTTGCT 58.609 50.000 0.00 0.00 42.38 3.91
1080 1120 9.771534 ATATGGCTATGTCTTCTTTTACTTCTC 57.228 33.333 0.00 0.00 0.00 2.87
1367 1410 6.402222 CAAGGTAAGAGCTCACTTCTATTGT 58.598 40.000 17.77 0.00 0.00 2.71
1368 1411 7.548097 CAAGGTAAGAGCTCACTTCTATTGTA 58.452 38.462 17.77 0.00 0.00 2.41
1652 1763 7.390440 ACATTGCACATACATACTGTACAAAGT 59.610 33.333 0.00 0.00 35.42 2.66
1653 1764 6.720012 TGCACATACATACTGTACAAAGTG 57.280 37.500 0.00 0.00 35.42 3.16
2138 2250 9.665264 GTCATTTAGTTTCAGTTTGGTCTTTAG 57.335 33.333 0.00 0.00 0.00 1.85
2356 2481 1.069636 GCCTGCGTTTTTCTCTCTGTG 60.070 52.381 0.00 0.00 0.00 3.66
3016 3141 5.514279 AGAAGTTCTCAAGAAAACAATGCG 58.486 37.500 0.00 0.00 35.58 4.73
3091 3216 2.643551 CTGGGGACGTTTTGCATAGAT 58.356 47.619 0.00 0.00 0.00 1.98
3629 3764 5.667539 TCTGGAGATTAGTGAGGAACTTG 57.332 43.478 0.00 0.00 41.55 3.16
3847 4006 6.118170 CCATGATAAGGACCTATATTGCTGG 58.882 44.000 0.00 0.00 0.00 4.85
4081 6406 7.274250 GCTTCACAATATTCAAATCAGAACCAC 59.726 37.037 0.00 0.00 0.00 4.16
4099 6424 9.582431 CAGAACCACGATTTCTAACTAGATTTA 57.418 33.333 0.00 0.00 31.86 1.40
4299 6625 4.222145 TCTTGTGTGTTCCTGGAGGTATAC 59.778 45.833 0.00 0.00 36.34 1.47
4710 7366 2.827921 GGGCAATTGCTTGGGATATAGG 59.172 50.000 28.42 0.00 41.70 2.57
4854 7690 2.512692 TAAGTGGCAGCAATGGTGAT 57.487 45.000 17.33 0.00 32.22 3.06
5049 8149 7.832685 AGAGTTACTGGGTTTTATGGGATTAAC 59.167 37.037 0.00 0.00 0.00 2.01
5064 8164 8.814038 ATGGGATTAACTGATATGGCTAAATC 57.186 34.615 0.00 0.00 0.00 2.17
5065 8165 7.754624 TGGGATTAACTGATATGGCTAAATCA 58.245 34.615 0.00 0.00 0.00 2.57
5066 8166 8.393259 TGGGATTAACTGATATGGCTAAATCAT 58.607 33.333 0.00 0.00 31.95 2.45
5067 8167 9.905713 GGGATTAACTGATATGGCTAAATCATA 57.094 33.333 0.00 0.00 31.95 2.15
5073 8173 9.664332 AACTGATATGGCTAAATCATACATCTC 57.336 33.333 0.00 0.00 31.95 2.75
5074 8174 9.044646 ACTGATATGGCTAAATCATACATCTCT 57.955 33.333 0.00 0.00 31.95 3.10
5077 8177 9.757227 GATATGGCTAAATCATACATCTCTACC 57.243 37.037 0.00 0.00 30.94 3.18
5078 8178 7.805083 ATGGCTAAATCATACATCTCTACCT 57.195 36.000 0.00 0.00 0.00 3.08
5079 8179 8.901472 ATGGCTAAATCATACATCTCTACCTA 57.099 34.615 0.00 0.00 0.00 3.08
5098 8428 9.438228 TCTACCTAAATCATACATCTCTACTCG 57.562 37.037 0.00 0.00 0.00 4.18
5122 8452 7.937394 TCGGTAGAGATGTGTTAGAATCATAGA 59.063 37.037 0.00 0.00 0.00 1.98
5136 8466 7.617041 AGAATCATAGATTAAAATAGCCCGC 57.383 36.000 0.00 0.00 0.00 6.13
5137 8467 6.313905 AGAATCATAGATTAAAATAGCCCGCG 59.686 38.462 0.00 0.00 0.00 6.46
5138 8468 5.142061 TCATAGATTAAAATAGCCCGCGA 57.858 39.130 8.23 0.00 0.00 5.87
5139 8469 5.543714 TCATAGATTAAAATAGCCCGCGAA 58.456 37.500 8.23 0.00 0.00 4.70
5140 8470 5.992829 TCATAGATTAAAATAGCCCGCGAAA 59.007 36.000 8.23 0.00 0.00 3.46
5141 8471 6.653320 TCATAGATTAAAATAGCCCGCGAAAT 59.347 34.615 8.23 0.00 0.00 2.17
5142 8472 7.820386 TCATAGATTAAAATAGCCCGCGAAATA 59.180 33.333 8.23 0.00 0.00 1.40
5143 8473 6.481954 AGATTAAAATAGCCCGCGAAATAG 57.518 37.500 8.23 0.00 0.00 1.73
5144 8474 4.477302 TTAAAATAGCCCGCGAAATAGC 57.523 40.909 8.23 1.83 0.00 2.97
5145 8475 1.235724 AAATAGCCCGCGAAATAGCC 58.764 50.000 8.23 0.00 0.00 3.93
5146 8476 0.949105 AATAGCCCGCGAAATAGCCG 60.949 55.000 8.23 0.00 0.00 5.52
5170 8500 3.948380 CTGCGCTATAGCTGCCTG 58.052 61.111 27.09 19.67 38.89 4.85
5171 8501 1.667191 CTGCGCTATAGCTGCCTGG 60.667 63.158 27.09 17.92 38.89 4.45
5172 8502 2.358003 GCGCTATAGCTGCCTGGG 60.358 66.667 21.98 6.20 39.32 4.45
5173 8503 2.872388 GCGCTATAGCTGCCTGGGA 61.872 63.158 21.98 0.00 39.32 4.37
5174 8504 1.291588 CGCTATAGCTGCCTGGGAG 59.708 63.158 21.98 11.32 39.32 4.30
5175 8505 1.003959 GCTATAGCTGCCTGGGAGC 60.004 63.158 30.25 30.25 38.21 4.70
5176 8506 1.676384 CTATAGCTGCCTGGGAGCC 59.324 63.158 32.88 17.30 37.12 4.70
5177 8507 0.835543 CTATAGCTGCCTGGGAGCCT 60.836 60.000 32.88 23.53 37.12 4.58
5178 8508 0.400525 TATAGCTGCCTGGGAGCCTT 60.401 55.000 32.88 23.34 37.12 4.35
5179 8509 1.992519 ATAGCTGCCTGGGAGCCTTG 61.993 60.000 32.88 1.54 37.12 3.61
5185 8515 3.785859 CTGGGAGCCTTGCCGCTA 61.786 66.667 0.00 0.00 39.87 4.26
5186 8516 3.326578 TGGGAGCCTTGCCGCTAA 61.327 61.111 0.00 0.00 39.87 3.09
5187 8517 2.514824 GGGAGCCTTGCCGCTAAG 60.515 66.667 0.00 0.00 39.87 2.18
5188 8518 3.205536 GGAGCCTTGCCGCTAAGC 61.206 66.667 0.00 0.00 39.87 3.09
5189 8519 2.124942 GAGCCTTGCCGCTAAGCT 60.125 61.111 0.00 0.00 39.87 3.74
5190 8520 1.144057 GAGCCTTGCCGCTAAGCTA 59.856 57.895 0.00 0.00 39.87 3.32
5191 8521 0.250081 GAGCCTTGCCGCTAAGCTAT 60.250 55.000 0.00 0.00 39.87 2.97
5192 8522 0.533755 AGCCTTGCCGCTAAGCTATG 60.534 55.000 0.00 0.00 37.32 2.23
5193 8523 1.510480 GCCTTGCCGCTAAGCTATGG 61.510 60.000 0.00 0.00 0.00 2.74
5210 8540 2.729491 GCTGTTGCCGCGAAAACC 60.729 61.111 8.23 0.00 0.00 3.27
5211 8541 3.030652 CTGTTGCCGCGAAAACCT 58.969 55.556 8.23 0.00 0.00 3.50
5212 8542 1.082104 CTGTTGCCGCGAAAACCTC 60.082 57.895 8.23 0.00 0.00 3.85
5213 8543 1.781025 CTGTTGCCGCGAAAACCTCA 61.781 55.000 8.23 0.00 0.00 3.86
5214 8544 1.357334 GTTGCCGCGAAAACCTCAA 59.643 52.632 8.23 0.00 0.00 3.02
5215 8545 0.933047 GTTGCCGCGAAAACCTCAAC 60.933 55.000 8.23 6.25 0.00 3.18
5216 8546 1.377366 TTGCCGCGAAAACCTCAACA 61.377 50.000 8.23 0.00 0.00 3.33
5217 8547 1.169661 TGCCGCGAAAACCTCAACAT 61.170 50.000 8.23 0.00 0.00 2.71
5218 8548 0.800012 GCCGCGAAAACCTCAACATA 59.200 50.000 8.23 0.00 0.00 2.29
5219 8549 1.400494 GCCGCGAAAACCTCAACATAT 59.600 47.619 8.23 0.00 0.00 1.78
5220 8550 2.538939 GCCGCGAAAACCTCAACATATC 60.539 50.000 8.23 0.00 0.00 1.63
5221 8551 2.031683 CCGCGAAAACCTCAACATATCC 59.968 50.000 8.23 0.00 0.00 2.59
5222 8552 2.031683 CGCGAAAACCTCAACATATCCC 59.968 50.000 0.00 0.00 0.00 3.85
5223 8553 3.279434 GCGAAAACCTCAACATATCCCT 58.721 45.455 0.00 0.00 0.00 4.20
5224 8554 3.312697 GCGAAAACCTCAACATATCCCTC 59.687 47.826 0.00 0.00 0.00 4.30
5225 8555 4.770795 CGAAAACCTCAACATATCCCTCT 58.229 43.478 0.00 0.00 0.00 3.69
5226 8556 5.684030 GCGAAAACCTCAACATATCCCTCTA 60.684 44.000 0.00 0.00 0.00 2.43
5227 8557 6.346096 CGAAAACCTCAACATATCCCTCTAA 58.654 40.000 0.00 0.00 0.00 2.10
5228 8558 6.821665 CGAAAACCTCAACATATCCCTCTAAA 59.178 38.462 0.00 0.00 0.00 1.85
5229 8559 7.499232 CGAAAACCTCAACATATCCCTCTAAAT 59.501 37.037 0.00 0.00 0.00 1.40
5230 8560 8.525290 AAAACCTCAACATATCCCTCTAAATG 57.475 34.615 0.00 0.00 0.00 2.32
5231 8561 6.192970 ACCTCAACATATCCCTCTAAATGG 57.807 41.667 0.00 0.00 0.00 3.16
5232 8562 5.006386 CCTCAACATATCCCTCTAAATGGC 58.994 45.833 0.00 0.00 0.00 4.40
5233 8563 5.222007 CCTCAACATATCCCTCTAAATGGCT 60.222 44.000 0.00 0.00 0.00 4.75
5234 8564 6.013379 CCTCAACATATCCCTCTAAATGGCTA 60.013 42.308 0.00 0.00 0.00 3.93
5235 8565 7.387265 TCAACATATCCCTCTAAATGGCTAA 57.613 36.000 0.00 0.00 0.00 3.09
5236 8566 7.811282 TCAACATATCCCTCTAAATGGCTAAA 58.189 34.615 0.00 0.00 0.00 1.85
5237 8567 8.278639 TCAACATATCCCTCTAAATGGCTAAAA 58.721 33.333 0.00 0.00 0.00 1.52
5238 8568 8.912988 CAACATATCCCTCTAAATGGCTAAAAA 58.087 33.333 0.00 0.00 0.00 1.94
5254 8584 2.831685 AAAAATCGGCAAAACCCTCC 57.168 45.000 0.00 0.00 33.26 4.30
5255 8585 1.710816 AAAATCGGCAAAACCCTCCA 58.289 45.000 0.00 0.00 33.26 3.86
5256 8586 1.256812 AAATCGGCAAAACCCTCCAG 58.743 50.000 0.00 0.00 33.26 3.86
5257 8587 0.404040 AATCGGCAAAACCCTCCAGA 59.596 50.000 0.00 0.00 33.26 3.86
5258 8588 0.404040 ATCGGCAAAACCCTCCAGAA 59.596 50.000 0.00 0.00 33.26 3.02
5259 8589 0.183971 TCGGCAAAACCCTCCAGAAA 59.816 50.000 0.00 0.00 33.26 2.52
5260 8590 1.203001 TCGGCAAAACCCTCCAGAAAT 60.203 47.619 0.00 0.00 33.26 2.17
5261 8591 1.202348 CGGCAAAACCCTCCAGAAATC 59.798 52.381 0.00 0.00 33.26 2.17
5262 8592 2.247358 GGCAAAACCCTCCAGAAATCA 58.753 47.619 0.00 0.00 0.00 2.57
5263 8593 2.833943 GGCAAAACCCTCCAGAAATCAT 59.166 45.455 0.00 0.00 0.00 2.45
5264 8594 3.118992 GGCAAAACCCTCCAGAAATCATC 60.119 47.826 0.00 0.00 0.00 2.92
5265 8595 3.766051 GCAAAACCCTCCAGAAATCATCT 59.234 43.478 0.00 0.00 39.68 2.90
5266 8596 4.142293 GCAAAACCCTCCAGAAATCATCTC 60.142 45.833 0.00 0.00 35.73 2.75
5267 8597 5.259632 CAAAACCCTCCAGAAATCATCTCT 58.740 41.667 0.00 0.00 35.73 3.10
5268 8598 4.769345 AACCCTCCAGAAATCATCTCTC 57.231 45.455 0.00 0.00 35.73 3.20
5269 8599 3.044894 ACCCTCCAGAAATCATCTCTCC 58.955 50.000 0.00 0.00 35.73 3.71
5270 8600 2.371510 CCCTCCAGAAATCATCTCTCCC 59.628 54.545 0.00 0.00 35.73 4.30
5271 8601 3.044156 CCTCCAGAAATCATCTCTCCCA 58.956 50.000 0.00 0.00 35.73 4.37
5272 8602 3.181456 CCTCCAGAAATCATCTCTCCCAC 60.181 52.174 0.00 0.00 35.73 4.61
5273 8603 2.774234 TCCAGAAATCATCTCTCCCACC 59.226 50.000 0.00 0.00 35.73 4.61
5274 8604 2.507058 CCAGAAATCATCTCTCCCACCA 59.493 50.000 0.00 0.00 35.73 4.17
5275 8605 3.433314 CCAGAAATCATCTCTCCCACCAG 60.433 52.174 0.00 0.00 35.73 4.00
5276 8606 3.453717 CAGAAATCATCTCTCCCACCAGA 59.546 47.826 0.00 0.00 35.73 3.86
5277 8607 4.080695 CAGAAATCATCTCTCCCACCAGAA 60.081 45.833 0.00 0.00 35.73 3.02
5278 8608 4.537688 AGAAATCATCTCTCCCACCAGAAA 59.462 41.667 0.00 0.00 30.46 2.52
5279 8609 4.934797 AATCATCTCTCCCACCAGAAAA 57.065 40.909 0.00 0.00 0.00 2.29
5280 8610 5.463051 AATCATCTCTCCCACCAGAAAAT 57.537 39.130 0.00 0.00 0.00 1.82
5281 8611 4.934797 TCATCTCTCCCACCAGAAAATT 57.065 40.909 0.00 0.00 0.00 1.82
5282 8612 5.261040 TCATCTCTCCCACCAGAAAATTT 57.739 39.130 0.00 0.00 0.00 1.82
5283 8613 5.644188 TCATCTCTCCCACCAGAAAATTTT 58.356 37.500 2.28 2.28 0.00 1.82
5284 8614 5.711976 TCATCTCTCCCACCAGAAAATTTTC 59.288 40.000 21.00 21.00 37.45 2.29
5285 8615 4.407365 TCTCTCCCACCAGAAAATTTTCC 58.593 43.478 24.01 9.23 37.92 3.13
5286 8616 3.153919 TCTCCCACCAGAAAATTTTCCG 58.846 45.455 24.01 15.78 37.92 4.30
5287 8617 1.616374 TCCCACCAGAAAATTTTCCGC 59.384 47.619 24.01 3.86 37.92 5.54
5288 8618 1.337728 CCCACCAGAAAATTTTCCGCC 60.338 52.381 24.01 3.51 37.92 6.13
5289 8619 1.342819 CCACCAGAAAATTTTCCGCCA 59.657 47.619 24.01 0.00 37.92 5.69
5290 8620 2.028203 CCACCAGAAAATTTTCCGCCAT 60.028 45.455 24.01 5.65 37.92 4.40
5291 8621 3.556843 CCACCAGAAAATTTTCCGCCATT 60.557 43.478 24.01 4.97 37.92 3.16
5292 8622 4.064388 CACCAGAAAATTTTCCGCCATTT 58.936 39.130 24.01 4.29 37.92 2.32
5293 8623 4.064388 ACCAGAAAATTTTCCGCCATTTG 58.936 39.130 24.01 14.81 37.92 2.32
5294 8624 3.120234 CCAGAAAATTTTCCGCCATTTGC 60.120 43.478 24.01 0.00 37.92 3.68
5295 8625 3.073678 AGAAAATTTTCCGCCATTTGCC 58.926 40.909 24.01 0.00 37.92 4.52
5296 8626 1.437625 AAATTTTCCGCCATTTGCCG 58.562 45.000 0.00 0.00 36.24 5.69
5297 8627 1.018752 AATTTTCCGCCATTTGCCGC 61.019 50.000 0.00 0.00 36.24 6.53
5298 8628 1.887344 ATTTTCCGCCATTTGCCGCT 61.887 50.000 0.00 0.00 36.24 5.52
5299 8629 1.244697 TTTTCCGCCATTTGCCGCTA 61.245 50.000 0.00 0.00 36.24 4.26
5300 8630 1.034838 TTTCCGCCATTTGCCGCTAT 61.035 50.000 0.00 0.00 36.24 2.97
5301 8631 1.034838 TTCCGCCATTTGCCGCTATT 61.035 50.000 0.00 0.00 36.24 1.73
5302 8632 1.299316 CCGCCATTTGCCGCTATTG 60.299 57.895 0.00 0.00 36.24 1.90
5303 8633 1.945662 CGCCATTTGCCGCTATTGC 60.946 57.895 0.00 0.00 36.24 3.56
5304 8634 1.592400 GCCATTTGCCGCTATTGCC 60.592 57.895 0.00 0.00 35.36 4.52
5305 8635 1.067916 CCATTTGCCGCTATTGCCC 59.932 57.895 0.00 0.00 35.36 5.36
5306 8636 1.299316 CATTTGCCGCTATTGCCCG 60.299 57.895 0.00 0.00 35.36 6.13
5307 8637 3.137637 ATTTGCCGCTATTGCCCGC 62.138 57.895 0.00 0.00 35.36 6.13
5308 8638 4.794648 TTGCCGCTATTGCCCGCT 62.795 61.111 7.24 0.00 33.61 5.52
5309 8639 2.878089 TTTGCCGCTATTGCCCGCTA 62.878 55.000 7.24 0.00 33.61 4.26
5310 8640 2.358737 GCCGCTATTGCCCGCTAT 60.359 61.111 0.00 0.00 35.36 2.97
5311 8641 2.680913 GCCGCTATTGCCCGCTATG 61.681 63.158 0.00 0.00 35.36 2.23
5312 8642 2.034879 CCGCTATTGCCCGCTATGG 61.035 63.158 0.00 0.00 35.36 2.74
5323 8653 2.577059 GCTATGGCGGCCGCTATA 59.423 61.111 41.64 41.64 42.29 1.31
5325 8655 2.577059 TATGGCGGCCGCTATAGC 59.423 61.111 41.59 29.45 42.29 2.97
5326 8656 1.982395 TATGGCGGCCGCTATAGCT 60.982 57.895 41.59 28.21 42.29 3.32
5327 8657 2.225791 TATGGCGGCCGCTATAGCTG 62.226 60.000 41.59 16.77 42.29 4.24
5332 8662 2.358003 GCCGCTATAGCTGCTGGG 60.358 66.667 27.86 19.26 45.80 4.45
5333 8663 2.345244 CCGCTATAGCTGCTGGGG 59.655 66.667 21.98 10.99 39.32 4.96
5334 8664 2.345244 CGCTATAGCTGCTGGGGG 59.655 66.667 21.98 6.70 39.32 5.40
5335 8665 2.210013 CGCTATAGCTGCTGGGGGA 61.210 63.158 21.98 0.00 39.32 4.81
5336 8666 1.676384 GCTATAGCTGCTGGGGGAG 59.324 63.158 17.75 3.32 38.21 4.30
5337 8667 1.835927 GCTATAGCTGCTGGGGGAGG 61.836 65.000 17.75 0.00 38.21 4.30
5338 8668 1.835927 CTATAGCTGCTGGGGGAGGC 61.836 65.000 13.43 0.00 0.00 4.70
5352 8682 4.856801 AGGCCGCCGCGAAATCAT 62.857 61.111 15.93 0.00 35.02 2.45
5353 8683 3.887868 GGCCGCCGCGAAATCATT 61.888 61.111 15.93 0.00 35.02 2.57
5354 8684 2.102161 GCCGCCGCGAAATCATTT 59.898 55.556 15.93 0.00 0.00 2.32
5355 8685 1.939299 GCCGCCGCGAAATCATTTC 60.939 57.895 15.93 0.00 36.32 2.17
5356 8686 1.721487 CCGCCGCGAAATCATTTCT 59.279 52.632 15.93 0.00 37.52 2.52
5357 8687 0.316196 CCGCCGCGAAATCATTTCTC 60.316 55.000 15.93 0.00 37.52 2.87
5358 8688 0.316196 CGCCGCGAAATCATTTCTCC 60.316 55.000 8.23 0.00 37.52 3.71
5359 8689 0.029433 GCCGCGAAATCATTTCTCCC 59.971 55.000 8.23 0.00 37.52 4.30
5360 8690 0.304705 CCGCGAAATCATTTCTCCCG 59.695 55.000 8.23 7.85 37.52 5.14
5361 8691 0.316196 CGCGAAATCATTTCTCCCGC 60.316 55.000 0.00 6.25 37.52 6.13
5362 8692 0.316196 GCGAAATCATTTCTCCCGCG 60.316 55.000 8.50 0.00 37.52 6.46
5363 8693 1.286501 CGAAATCATTTCTCCCGCGA 58.713 50.000 8.23 0.00 37.52 5.87
5364 8694 1.867233 CGAAATCATTTCTCCCGCGAT 59.133 47.619 8.23 0.00 37.52 4.58
5365 8695 2.287915 CGAAATCATTTCTCCCGCGATT 59.712 45.455 8.23 0.00 37.52 3.34
5366 8696 3.242739 CGAAATCATTTCTCCCGCGATTT 60.243 43.478 8.23 1.37 38.61 2.17
5367 8697 4.672409 GAAATCATTTCTCCCGCGATTTT 58.328 39.130 8.23 0.00 36.65 1.82
5368 8698 5.503357 CGAAATCATTTCTCCCGCGATTTTA 60.503 40.000 8.23 0.00 36.65 1.52
5369 8699 5.828299 AATCATTTCTCCCGCGATTTTAA 57.172 34.783 8.23 0.00 0.00 1.52
5370 8700 6.391227 AATCATTTCTCCCGCGATTTTAAT 57.609 33.333 8.23 0.00 0.00 1.40
5371 8701 5.418310 TCATTTCTCCCGCGATTTTAATC 57.582 39.130 8.23 0.00 0.00 1.75
5372 8702 4.274950 TCATTTCTCCCGCGATTTTAATCC 59.725 41.667 8.23 0.00 31.68 3.01
5373 8703 2.992124 TCTCCCGCGATTTTAATCCA 57.008 45.000 8.23 0.00 31.68 3.41
5374 8704 3.485463 TCTCCCGCGATTTTAATCCAT 57.515 42.857 8.23 0.00 31.68 3.41
5375 8705 3.138304 TCTCCCGCGATTTTAATCCATG 58.862 45.455 8.23 0.00 31.68 3.66
5376 8706 2.226330 TCCCGCGATTTTAATCCATGG 58.774 47.619 8.23 4.97 31.68 3.66
5377 8707 1.953686 CCCGCGATTTTAATCCATGGT 59.046 47.619 12.58 0.00 31.68 3.55
5378 8708 2.360801 CCCGCGATTTTAATCCATGGTT 59.639 45.455 12.58 8.15 31.68 3.67
5379 8709 3.566322 CCCGCGATTTTAATCCATGGTTA 59.434 43.478 12.58 7.13 31.68 2.85
5380 8710 4.320202 CCCGCGATTTTAATCCATGGTTAG 60.320 45.833 12.58 0.00 31.68 2.34
5381 8711 4.513692 CCGCGATTTTAATCCATGGTTAGA 59.486 41.667 12.58 2.72 31.68 2.10
5382 8712 5.008217 CCGCGATTTTAATCCATGGTTAGAA 59.992 40.000 12.58 11.15 31.68 2.10
5383 8713 6.293955 CCGCGATTTTAATCCATGGTTAGAAT 60.294 38.462 12.58 14.88 31.68 2.40
5384 8714 6.578545 CGCGATTTTAATCCATGGTTAGAATG 59.421 38.462 12.58 11.21 31.68 2.67
5385 8715 6.363357 GCGATTTTAATCCATGGTTAGAATGC 59.637 38.462 12.58 15.46 31.68 3.56
5386 8716 7.651808 CGATTTTAATCCATGGTTAGAATGCT 58.348 34.615 12.58 0.00 31.68 3.79
5387 8717 7.592533 CGATTTTAATCCATGGTTAGAATGCTG 59.407 37.037 12.58 5.84 31.68 4.41
5388 8718 7.953005 TTTTAATCCATGGTTAGAATGCTGA 57.047 32.000 12.58 0.00 0.00 4.26
5389 8719 8.537728 TTTTAATCCATGGTTAGAATGCTGAT 57.462 30.769 12.58 0.00 0.00 2.90
5390 8720 8.537728 TTTAATCCATGGTTAGAATGCTGATT 57.462 30.769 12.58 1.96 0.00 2.57
5400 8731 8.055181 TGGTTAGAATGCTGATTATTCCTCTTT 58.945 33.333 0.00 0.00 35.62 2.52
5801 9162 3.424703 CACAAACATCCAACCTCCTGAT 58.575 45.455 0.00 0.00 0.00 2.90
5945 9306 8.478066 ACTACTGTGAATGCTACATTCTATTCA 58.522 33.333 18.27 11.97 37.25 2.57
6024 9385 5.687166 AAATGGTAACGACTGGATTCCTA 57.313 39.130 3.95 0.00 42.51 2.94
6098 9459 2.613026 TCAGTCCAAGAAGTTTCGCA 57.387 45.000 0.00 0.00 0.00 5.10
6382 9746 6.769822 ACAAAACTGCTGCTCTATATGCTTAT 59.230 34.615 0.00 0.00 0.00 1.73
6383 9747 7.933577 ACAAAACTGCTGCTCTATATGCTTATA 59.066 33.333 0.00 0.00 0.00 0.98
6517 9884 2.656422 GCACACAATCAACAATACACGC 59.344 45.455 0.00 0.00 0.00 5.34
6549 9922 2.688446 TCACGAAGCTATGTCTAGGTGG 59.312 50.000 0.00 0.00 35.88 4.61
6558 9931 1.682478 TGTCTAGGTGGAGAGAGGGA 58.318 55.000 0.00 0.00 0.00 4.20
6588 9961 5.920273 ACCAAAGCGATAAAAACAGTGATTG 59.080 36.000 0.00 0.00 0.00 2.67
6591 9964 7.967854 CCAAAGCGATAAAAACAGTGATTGATA 59.032 33.333 0.00 0.00 0.00 2.15
6602 9975 8.442632 AAACAGTGATTGATAGTATGATGGTG 57.557 34.615 0.00 0.00 0.00 4.17
6603 9976 7.129457 ACAGTGATTGATAGTATGATGGTGT 57.871 36.000 0.00 0.00 0.00 4.16
6604 9977 8.250143 ACAGTGATTGATAGTATGATGGTGTA 57.750 34.615 0.00 0.00 0.00 2.90
6609 9982 8.512138 TGATTGATAGTATGATGGTGTAGTACG 58.488 37.037 0.00 0.00 0.00 3.67
6623 9996 3.439129 TGTAGTACGACAGTGACCATCAG 59.561 47.826 4.53 0.00 0.00 2.90
6661 10034 5.112220 ACAACACAAGTACGACGAGATTA 57.888 39.130 0.00 0.00 0.00 1.75
6712 10087 2.474526 GGAATGACAACAAGCATCGTCG 60.475 50.000 0.00 0.00 0.00 5.12
6765 10149 2.949644 CCCCTGAAAAACAAGTTCGAGT 59.050 45.455 0.00 0.00 0.00 4.18
6938 10568 2.159184 TCTCATCCACTTGCGAGATCAC 60.159 50.000 8.31 0.00 29.71 3.06
6970 10600 4.728102 TGCACGGTCCTAACGGCG 62.728 66.667 4.80 4.80 35.23 6.46
6999 10629 4.881440 TGCCCGCATGATCAGGCC 62.881 66.667 25.30 12.83 45.14 5.19
7021 10651 4.269523 AGCCAAGCCGCTCACCAA 62.270 61.111 0.00 0.00 32.06 3.67
7022 10652 4.043200 GCCAAGCCGCTCACCAAC 62.043 66.667 0.00 0.00 0.00 3.77
7023 10653 2.594303 CCAAGCCGCTCACCAACA 60.594 61.111 0.00 0.00 0.00 3.33
7024 10654 1.973281 CCAAGCCGCTCACCAACAT 60.973 57.895 0.00 0.00 0.00 2.71
7026 10656 1.973281 AAGCCGCTCACCAACATGG 60.973 57.895 0.00 0.00 45.02 3.66
7028 10658 3.803082 CCGCTCACCAACATGGCG 61.803 66.667 0.00 0.00 42.67 5.69
7030 10660 3.667087 GCTCACCAACATGGCGAA 58.333 55.556 0.00 0.00 42.67 4.70
7031 10661 1.503542 GCTCACCAACATGGCGAAG 59.496 57.895 0.00 0.00 42.67 3.79
7032 10662 1.237285 GCTCACCAACATGGCGAAGT 61.237 55.000 0.00 0.00 42.67 3.01
7033 10663 0.798776 CTCACCAACATGGCGAAGTC 59.201 55.000 0.00 0.00 42.67 3.01
7036 10666 1.608590 CACCAACATGGCGAAGTCTTT 59.391 47.619 0.00 0.00 42.67 2.52
7037 10667 1.608590 ACCAACATGGCGAAGTCTTTG 59.391 47.619 0.00 0.00 42.67 2.77
7038 10668 1.879380 CCAACATGGCGAAGTCTTTGA 59.121 47.619 3.82 0.00 0.00 2.69
7039 10669 2.489329 CCAACATGGCGAAGTCTTTGAT 59.511 45.455 3.82 0.00 0.00 2.57
7040 10670 3.057315 CCAACATGGCGAAGTCTTTGATT 60.057 43.478 3.82 0.00 0.00 2.57
7041 10671 3.837213 ACATGGCGAAGTCTTTGATTG 57.163 42.857 3.82 0.73 0.00 2.67
7042 10672 2.489329 ACATGGCGAAGTCTTTGATTGG 59.511 45.455 3.82 0.00 0.00 3.16
7045 10675 2.552315 TGGCGAAGTCTTTGATTGGAAC 59.448 45.455 3.82 0.00 0.00 3.62
7046 10676 2.412847 GGCGAAGTCTTTGATTGGAACG 60.413 50.000 3.82 0.00 0.00 3.95
7048 10678 3.059188 GCGAAGTCTTTGATTGGAACGAA 60.059 43.478 3.82 0.00 0.00 3.85
7049 10679 4.553938 GCGAAGTCTTTGATTGGAACGAAA 60.554 41.667 3.82 0.00 0.00 3.46
7050 10680 4.904154 CGAAGTCTTTGATTGGAACGAAAC 59.096 41.667 0.00 0.00 0.00 2.78
7051 10681 4.468095 AGTCTTTGATTGGAACGAAACG 57.532 40.909 0.00 0.00 0.00 3.60
7052 10682 3.250040 AGTCTTTGATTGGAACGAAACGG 59.750 43.478 0.00 0.00 0.00 4.44
7054 10684 3.249080 TCTTTGATTGGAACGAAACGGTC 59.751 43.478 0.34 0.34 43.47 4.79
7056 10686 1.868498 TGATTGGAACGAAACGGTCAC 59.132 47.619 11.12 1.95 46.28 3.67
7057 10687 1.196127 GATTGGAACGAAACGGTCACC 59.804 52.381 11.12 0.00 46.28 4.02
7058 10688 0.107800 TTGGAACGAAACGGTCACCA 60.108 50.000 11.12 0.00 46.28 4.17
7059 10689 0.810823 TGGAACGAAACGGTCACCAC 60.811 55.000 11.12 0.00 46.28 4.16
7060 10690 1.501337 GGAACGAAACGGTCACCACC 61.501 60.000 11.12 0.00 46.28 4.61
7071 10701 2.629051 GGTCACCACCGAAATCCTAAG 58.371 52.381 0.00 0.00 31.06 2.18
7072 10702 2.027469 GGTCACCACCGAAATCCTAAGT 60.027 50.000 0.00 0.00 31.06 2.24
7073 10703 3.558533 GGTCACCACCGAAATCCTAAGTT 60.559 47.826 0.00 0.00 31.06 2.66
7074 10704 4.070009 GTCACCACCGAAATCCTAAGTTT 58.930 43.478 0.00 0.00 0.00 2.66
7075 10705 4.069304 TCACCACCGAAATCCTAAGTTTG 58.931 43.478 0.00 0.00 0.00 2.93
7076 10706 3.190535 CACCACCGAAATCCTAAGTTTGG 59.809 47.826 0.00 0.00 39.48 3.28
7077 10707 2.752903 CCACCGAAATCCTAAGTTTGGG 59.247 50.000 3.41 0.00 38.17 4.12
7078 10708 2.752903 CACCGAAATCCTAAGTTTGGGG 59.247 50.000 3.41 0.00 38.17 4.96
7079 10709 2.645797 ACCGAAATCCTAAGTTTGGGGA 59.354 45.455 3.41 0.00 38.17 4.81
7080 10710 3.279434 CCGAAATCCTAAGTTTGGGGAG 58.721 50.000 3.41 0.00 31.52 4.30
7081 10711 3.279434 CGAAATCCTAAGTTTGGGGAGG 58.721 50.000 3.41 0.00 32.28 4.30
7083 10713 4.566907 CGAAATCCTAAGTTTGGGGAGGAA 60.567 45.833 3.41 0.00 41.37 3.36
7084 10714 4.592997 AATCCTAAGTTTGGGGAGGAAG 57.407 45.455 3.41 0.00 41.37 3.46
7085 10715 2.275466 TCCTAAGTTTGGGGAGGAAGG 58.725 52.381 3.41 0.00 35.12 3.46
7086 10716 2.157911 TCCTAAGTTTGGGGAGGAAGGA 60.158 50.000 3.41 0.00 35.12 3.36
7087 10717 2.026169 CCTAAGTTTGGGGAGGAAGGAC 60.026 54.545 0.00 0.00 0.00 3.85
7088 10718 1.529744 AAGTTTGGGGAGGAAGGACA 58.470 50.000 0.00 0.00 0.00 4.02
7089 10719 1.529744 AGTTTGGGGAGGAAGGACAA 58.470 50.000 0.00 0.00 0.00 3.18
7090 10720 1.856920 AGTTTGGGGAGGAAGGACAAA 59.143 47.619 0.00 0.00 0.00 2.83
7091 10721 2.450886 AGTTTGGGGAGGAAGGACAAAT 59.549 45.455 0.00 0.00 34.11 2.32
7092 10722 2.562738 GTTTGGGGAGGAAGGACAAATG 59.437 50.000 0.00 0.00 34.11 2.32
7093 10723 0.704076 TGGGGAGGAAGGACAAATGG 59.296 55.000 0.00 0.00 0.00 3.16
7094 10724 0.684479 GGGGAGGAAGGACAAATGGC 60.684 60.000 0.00 0.00 0.00 4.40
7095 10725 0.039618 GGGAGGAAGGACAAATGGCA 59.960 55.000 0.00 0.00 0.00 4.92
7096 10726 1.467920 GGAGGAAGGACAAATGGCAG 58.532 55.000 0.00 0.00 0.00 4.85
7098 10728 2.519013 GAGGAAGGACAAATGGCAGTT 58.481 47.619 0.00 0.00 0.00 3.16
7099 10729 2.229784 GAGGAAGGACAAATGGCAGTTG 59.770 50.000 24.46 24.46 0.00 3.16
7100 10730 2.158475 AGGAAGGACAAATGGCAGTTGA 60.158 45.455 31.53 0.00 0.00 3.18
7101 10731 2.827921 GGAAGGACAAATGGCAGTTGAT 59.172 45.455 31.53 16.86 0.00 2.57
7102 10732 3.367703 GGAAGGACAAATGGCAGTTGATG 60.368 47.826 31.53 9.12 0.00 3.07
7103 10733 2.173519 AGGACAAATGGCAGTTGATGG 58.826 47.619 31.53 7.90 0.00 3.51
7113 10743 2.464865 GCAGTTGATGGCTAGTCTACG 58.535 52.381 0.00 0.00 0.00 3.51
7114 10744 2.159226 GCAGTTGATGGCTAGTCTACGT 60.159 50.000 0.00 0.00 0.00 3.57
7115 10745 3.676324 GCAGTTGATGGCTAGTCTACGTT 60.676 47.826 0.00 0.00 0.00 3.99
7118 10748 5.066117 CAGTTGATGGCTAGTCTACGTTAGA 59.934 44.000 0.00 0.00 0.00 2.10
7119 10749 5.828859 AGTTGATGGCTAGTCTACGTTAGAT 59.171 40.000 0.00 0.00 37.13 1.98
7120 10750 5.690997 TGATGGCTAGTCTACGTTAGATG 57.309 43.478 0.00 0.00 37.13 2.90
7121 10751 5.374071 TGATGGCTAGTCTACGTTAGATGA 58.626 41.667 0.00 0.00 37.13 2.92
7123 10753 4.520179 TGGCTAGTCTACGTTAGATGACA 58.480 43.478 0.00 0.00 37.13 3.58
7124 10754 5.131067 TGGCTAGTCTACGTTAGATGACAT 58.869 41.667 0.00 0.00 37.13 3.06
7125 10755 5.238868 TGGCTAGTCTACGTTAGATGACATC 59.761 44.000 7.39 7.39 37.13 3.06
7127 10757 6.072397 GGCTAGTCTACGTTAGATGACATCAT 60.072 42.308 17.57 5.57 37.13 2.45
7136 10766 2.681660 ATGACATCATCACGTGCCG 58.318 52.632 11.67 4.00 41.24 5.69
7137 10767 1.431488 ATGACATCATCACGTGCCGC 61.431 55.000 11.67 0.00 41.24 6.53
7139 10769 2.885164 CATCATCACGTGCCGCGA 60.885 61.111 11.67 4.59 44.77 5.87
7140 10770 2.885644 ATCATCACGTGCCGCGAC 60.886 61.111 11.67 0.00 44.77 5.19
7154 10784 4.570663 CGACCAGATCCGCCGTCC 62.571 72.222 0.00 0.00 0.00 4.79
7155 10785 3.148279 GACCAGATCCGCCGTCCT 61.148 66.667 0.00 0.00 0.00 3.85
7156 10786 3.140225 GACCAGATCCGCCGTCCTC 62.140 68.421 0.00 0.00 0.00 3.71
7157 10787 4.271816 CCAGATCCGCCGTCCTCG 62.272 72.222 0.00 0.00 0.00 4.63
7158 10788 4.933064 CAGATCCGCCGTCCTCGC 62.933 72.222 0.00 0.00 35.54 5.03
7161 10791 4.889112 ATCCGCCGTCCTCGCCTA 62.889 66.667 0.00 0.00 35.54 3.93
7162 10792 4.889112 TCCGCCGTCCTCGCCTAT 62.889 66.667 0.00 0.00 35.54 2.57
7163 10793 4.647615 CCGCCGTCCTCGCCTATG 62.648 72.222 0.00 0.00 35.54 2.23
7165 10795 4.971125 GCCGTCCTCGCCTATGGC 62.971 72.222 0.00 0.00 46.75 4.40
7179 10809 4.151258 CCTATGGCAGCAAATCATAACG 57.849 45.455 0.00 0.00 0.00 3.18
7180 10810 3.814842 CCTATGGCAGCAAATCATAACGA 59.185 43.478 0.00 0.00 0.00 3.85
7182 10812 2.016318 TGGCAGCAAATCATAACGAGG 58.984 47.619 0.00 0.00 0.00 4.63
7183 10813 1.334869 GGCAGCAAATCATAACGAGGG 59.665 52.381 0.00 0.00 0.00 4.30
7185 10815 2.917933 CAGCAAATCATAACGAGGGGA 58.082 47.619 0.00 0.00 0.00 4.81
7188 10818 4.157656 CAGCAAATCATAACGAGGGGAAAA 59.842 41.667 0.00 0.00 0.00 2.29
7189 10819 4.770010 AGCAAATCATAACGAGGGGAAAAA 59.230 37.500 0.00 0.00 0.00 1.94
7190 10820 4.862574 GCAAATCATAACGAGGGGAAAAAC 59.137 41.667 0.00 0.00 0.00 2.43
7191 10821 5.565834 GCAAATCATAACGAGGGGAAAAACA 60.566 40.000 0.00 0.00 0.00 2.83
7193 10823 5.835113 ATCATAACGAGGGGAAAAACATG 57.165 39.130 0.00 0.00 0.00 3.21
7195 10825 4.698304 TCATAACGAGGGGAAAAACATGAC 59.302 41.667 0.00 0.00 0.00 3.06
7196 10826 1.905637 ACGAGGGGAAAAACATGACC 58.094 50.000 0.00 0.00 0.00 4.02
7197 10827 0.802494 CGAGGGGAAAAACATGACCG 59.198 55.000 0.00 0.00 0.00 4.79
7198 10828 0.526211 GAGGGGAAAAACATGACCGC 59.474 55.000 0.00 3.43 35.95 5.68
7199 10829 0.898326 AGGGGAAAAACATGACCGCC 60.898 55.000 0.00 1.39 36.27 6.13
7200 10830 1.182385 GGGGAAAAACATGACCGCCA 61.182 55.000 0.00 0.00 0.00 5.69
7201 10831 0.038618 GGGAAAAACATGACCGCCAC 60.039 55.000 0.00 0.00 0.00 5.01
7202 10832 0.038618 GGAAAAACATGACCGCCACC 60.039 55.000 0.00 0.00 0.00 4.61
7206 10836 1.876497 AAACATGACCGCCACCATGC 61.876 55.000 0.00 0.00 42.77 4.06
7207 10837 2.751036 CATGACCGCCACCATGCA 60.751 61.111 0.00 0.00 34.52 3.96
7208 10838 2.122797 CATGACCGCCACCATGCAT 61.123 57.895 0.00 0.00 34.52 3.96
7209 10839 1.380246 ATGACCGCCACCATGCATT 60.380 52.632 0.00 0.00 0.00 3.56
7210 10840 1.669049 ATGACCGCCACCATGCATTG 61.669 55.000 0.00 0.00 0.00 2.82
7211 10841 3.704908 GACCGCCACCATGCATTGC 62.705 63.158 0.00 0.46 0.00 3.56
7212 10842 3.454573 CCGCCACCATGCATTGCT 61.455 61.111 10.49 0.00 0.00 3.91
7213 10843 2.103538 CGCCACCATGCATTGCTC 59.896 61.111 10.49 0.00 0.00 4.26
7214 10844 2.103538 GCCACCATGCATTGCTCG 59.896 61.111 10.49 0.58 0.00 5.03
7216 10846 1.375853 GCCACCATGCATTGCTCGTA 61.376 55.000 10.49 0.00 0.00 3.43
7218 10848 0.028505 CACCATGCATTGCTCGTAGC 59.971 55.000 10.49 0.58 42.82 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 2.476821 CCTCCGTCGCCGTTTATTTAT 58.523 47.619 0.00 0.00 0.00 1.40
71 72 1.363885 GCCTCCGTCGCCGTTTATTT 61.364 55.000 0.00 0.00 0.00 1.40
181 182 4.439901 GGAAGGGGGAGGAGGCCT 62.440 72.222 3.86 3.86 36.03 5.19
281 286 5.221145 CCCTGGCACAATTACGCAATATAAA 60.221 40.000 1.19 0.00 38.70 1.40
282 287 4.277174 CCCTGGCACAATTACGCAATATAA 59.723 41.667 1.19 0.00 38.70 0.98
284 289 2.622942 CCCTGGCACAATTACGCAATAT 59.377 45.455 1.19 0.00 38.70 1.28
285 290 2.020720 CCCTGGCACAATTACGCAATA 58.979 47.619 1.19 0.00 38.70 1.90
331 337 2.871453 ACCGGAGCACAAAATTAACCT 58.129 42.857 9.46 0.00 0.00 3.50
336 342 0.678950 CCCAACCGGAGCACAAAATT 59.321 50.000 9.46 0.00 0.00 1.82
349 355 1.383386 AACCCAACCCAACCCAACC 60.383 57.895 0.00 0.00 0.00 3.77
350 356 1.691195 CCAACCCAACCCAACCCAAC 61.691 60.000 0.00 0.00 0.00 3.77
351 357 1.383248 CCAACCCAACCCAACCCAA 60.383 57.895 0.00 0.00 0.00 4.12
352 358 2.283809 CCAACCCAACCCAACCCA 59.716 61.111 0.00 0.00 0.00 4.51
353 359 2.525629 CCCAACCCAACCCAACCC 60.526 66.667 0.00 0.00 0.00 4.11
354 360 1.383386 AACCCAACCCAACCCAACC 60.383 57.895 0.00 0.00 0.00 3.77
355 361 1.691195 CCAACCCAACCCAACCCAAC 61.691 60.000 0.00 0.00 0.00 3.77
356 362 1.383248 CCAACCCAACCCAACCCAA 60.383 57.895 0.00 0.00 0.00 4.12
357 363 2.283809 CCAACCCAACCCAACCCA 59.716 61.111 0.00 0.00 0.00 4.51
358 364 2.525629 CCCAACCCAACCCAACCC 60.526 66.667 0.00 0.00 0.00 4.11
359 365 1.383386 AACCCAACCCAACCCAACC 60.383 57.895 0.00 0.00 0.00 3.77
360 366 0.978667 ACAACCCAACCCAACCCAAC 60.979 55.000 0.00 0.00 0.00 3.77
361 367 0.978146 CACAACCCAACCCAACCCAA 60.978 55.000 0.00 0.00 0.00 4.12
362 368 1.381872 CACAACCCAACCCAACCCA 60.382 57.895 0.00 0.00 0.00 4.51
363 369 0.471022 ATCACAACCCAACCCAACCC 60.471 55.000 0.00 0.00 0.00 4.11
517 537 0.467290 TCACAAGACAAGCAACCCCC 60.467 55.000 0.00 0.00 0.00 5.40
584 604 3.186409 CGACGCACCCTATTAAATCCATG 59.814 47.826 0.00 0.00 0.00 3.66
586 606 2.168936 ACGACGCACCCTATTAAATCCA 59.831 45.455 0.00 0.00 0.00 3.41
592 612 0.378257 GTCGACGACGCACCCTATTA 59.622 55.000 12.94 0.00 39.58 0.98
605 625 2.933495 TCTAAATCACCAGGTCGACG 57.067 50.000 9.92 0.00 0.00 5.12
727 760 7.509141 TTGAGCATGAAGAAACTTATGTTGA 57.491 32.000 0.00 0.00 36.39 3.18
736 769 5.006165 CGAGACCTATTGAGCATGAAGAAAC 59.994 44.000 0.00 0.00 0.00 2.78
761 794 6.682423 TTACATGAACACATTATGAGCAGG 57.318 37.500 0.00 0.00 0.00 4.85
889 922 6.410540 AGAAGAGAGCCTGTTACAAAATAGG 58.589 40.000 0.00 0.00 44.63 2.57
901 934 2.743126 CTGCAAAAGAGAAGAGAGCCTG 59.257 50.000 0.00 0.00 0.00 4.85
929 964 9.447157 AAAATCTCCAGAGAAGAACAGATTAAG 57.553 33.333 0.66 0.00 41.36 1.85
987 1023 1.918253 CTCCATCAGGAACCAGGGG 59.082 63.158 0.00 0.00 45.19 4.79
1022 1062 3.071892 ACCAAAACCACGGACTTGATAGA 59.928 43.478 0.00 0.00 0.00 1.98
1080 1120 0.449388 GGCTGCAATTCTGAAGGACG 59.551 55.000 0.50 0.00 0.00 4.79
1212 1252 4.452455 CGTGACTTTAGCCTGAAGTGAATT 59.548 41.667 6.61 0.00 37.46 2.17
1652 1763 6.042093 AGACCTCAAATAAAGTCACTGAGTCA 59.958 38.462 0.00 0.00 33.21 3.41
1653 1764 6.459923 AGACCTCAAATAAAGTCACTGAGTC 58.540 40.000 0.00 0.00 33.21 3.36
2138 2250 3.064900 AGCCAGACTTCAAGGAACATC 57.935 47.619 0.00 0.00 0.00 3.06
2260 2373 4.096382 CCTCCGTCCCAAAATAAATGTCTG 59.904 45.833 0.00 0.00 0.00 3.51
2356 2481 0.607489 AGCCAGCATCACAAGACCAC 60.607 55.000 0.00 0.00 0.00 4.16
2475 2600 4.721776 TCTTCAGCAGGGTTATTCAGGTAT 59.278 41.667 0.00 0.00 0.00 2.73
3016 3141 3.276660 GCAAAACGCGGAAACAAATTTC 58.723 40.909 12.47 0.00 43.11 2.17
3091 3216 3.907474 TGAAGTCACAAGGAAGATGGGTA 59.093 43.478 0.00 0.00 0.00 3.69
3256 3389 3.071479 TGCGGGTACTTTCAAACTCATC 58.929 45.455 0.00 0.00 0.00 2.92
3629 3764 3.339141 CTCTTTCCCTGGTGTCTTTAGC 58.661 50.000 0.00 0.00 0.00 3.09
3847 4006 2.080286 ACAGTGCTGGTTCGATGTAC 57.920 50.000 4.11 0.00 34.19 2.90
4081 6406 7.723324 TCAGGGGTAAATCTAGTTAGAAATCG 58.277 38.462 0.00 0.00 35.69 3.34
4099 6424 3.181434 TGCAAAGTTAACTGATCAGGGGT 60.181 43.478 26.08 13.39 0.00 4.95
4299 6625 6.516718 ACATCCTAGGATTGACGAATTGTAG 58.483 40.000 22.29 8.30 31.62 2.74
4592 7233 4.751767 TGGGCAAGTTCTTCATTTTGTT 57.248 36.364 0.00 0.00 0.00 2.83
4643 7294 1.128513 GCGTTTGGCACAGCTAAAAC 58.871 50.000 2.09 6.47 40.38 2.43
4710 7366 2.615912 CTGAGTATTTGCCTTGCTAGCC 59.384 50.000 13.29 0.00 0.00 3.93
5067 8167 9.821240 AGAGATGTATGATTTAGGTAGAGATGT 57.179 33.333 0.00 0.00 0.00 3.06
5072 8172 9.438228 CGAGTAGAGATGTATGATTTAGGTAGA 57.562 37.037 0.00 0.00 0.00 2.59
5073 8173 8.670135 CCGAGTAGAGATGTATGATTTAGGTAG 58.330 40.741 0.00 0.00 0.00 3.18
5074 8174 8.162085 ACCGAGTAGAGATGTATGATTTAGGTA 58.838 37.037 0.00 0.00 0.00 3.08
5075 8175 7.005296 ACCGAGTAGAGATGTATGATTTAGGT 58.995 38.462 0.00 0.00 0.00 3.08
5076 8176 7.455641 ACCGAGTAGAGATGTATGATTTAGG 57.544 40.000 0.00 0.00 0.00 2.69
5077 8177 9.438228 TCTACCGAGTAGAGATGTATGATTTAG 57.562 37.037 9.00 0.00 39.81 1.85
5117 8447 5.856126 TTCGCGGGCTATTTTAATCTATG 57.144 39.130 6.13 0.00 0.00 2.23
5118 8448 7.201617 GCTATTTCGCGGGCTATTTTAATCTAT 60.202 37.037 6.13 0.00 0.00 1.98
5122 8452 4.082949 GGCTATTTCGCGGGCTATTTTAAT 60.083 41.667 6.13 0.00 0.00 1.40
5124 8454 2.809696 GGCTATTTCGCGGGCTATTTTA 59.190 45.455 6.13 0.00 0.00 1.52
5125 8455 1.607148 GGCTATTTCGCGGGCTATTTT 59.393 47.619 6.13 0.00 0.00 1.82
5126 8456 1.235724 GGCTATTTCGCGGGCTATTT 58.764 50.000 6.13 0.00 0.00 1.40
5127 8457 0.949105 CGGCTATTTCGCGGGCTATT 60.949 55.000 6.13 0.00 0.00 1.73
5128 8458 1.374252 CGGCTATTTCGCGGGCTAT 60.374 57.895 6.13 0.00 0.00 2.97
5129 8459 2.028484 CGGCTATTTCGCGGGCTA 59.972 61.111 6.13 0.00 0.00 3.93
5136 8466 0.710567 CAGCTATCGCGGCTATTTCG 59.289 55.000 6.13 0.00 42.32 3.46
5157 8487 1.003959 GCTCCCAGGCAGCTATAGC 60.004 63.158 17.33 17.33 42.49 2.97
5158 8488 0.835543 AGGCTCCCAGGCAGCTATAG 60.836 60.000 1.24 0.00 44.19 1.31
5159 8489 0.400525 AAGGCTCCCAGGCAGCTATA 60.401 55.000 1.24 0.00 44.19 1.31
5160 8490 1.695597 AAGGCTCCCAGGCAGCTAT 60.696 57.895 1.24 0.00 44.19 2.97
5161 8491 2.285668 AAGGCTCCCAGGCAGCTA 60.286 61.111 1.24 0.00 44.19 3.32
5162 8492 4.044439 CAAGGCTCCCAGGCAGCT 62.044 66.667 1.24 0.00 44.19 4.24
5168 8498 3.329542 TTAGCGGCAAGGCTCCCAG 62.330 63.158 1.45 0.09 43.54 4.45
5169 8499 3.326578 TTAGCGGCAAGGCTCCCA 61.327 61.111 1.45 0.00 43.54 4.37
5170 8500 2.514824 CTTAGCGGCAAGGCTCCC 60.515 66.667 1.45 0.00 43.54 4.30
5171 8501 2.311688 TAGCTTAGCGGCAAGGCTCC 62.312 60.000 14.64 0.00 43.54 4.70
5172 8502 0.250081 ATAGCTTAGCGGCAAGGCTC 60.250 55.000 14.64 0.52 43.54 4.70
5173 8503 0.533755 CATAGCTTAGCGGCAAGGCT 60.534 55.000 15.31 15.31 46.88 4.58
5174 8504 1.510480 CCATAGCTTAGCGGCAAGGC 61.510 60.000 1.45 2.75 34.17 4.35
5175 8505 1.510480 GCCATAGCTTAGCGGCAAGG 61.510 60.000 15.01 7.98 44.25 3.61
5176 8506 1.944778 GCCATAGCTTAGCGGCAAG 59.055 57.895 15.01 5.33 44.25 4.01
5177 8507 4.141144 GCCATAGCTTAGCGGCAA 57.859 55.556 15.01 0.00 44.25 4.52
5192 8522 2.729491 GTTTTCGCGGCAACAGCC 60.729 61.111 6.13 0.00 45.19 4.85
5193 8523 2.729491 GGTTTTCGCGGCAACAGC 60.729 61.111 18.88 2.59 0.00 4.40
5194 8524 1.082104 GAGGTTTTCGCGGCAACAG 60.082 57.895 18.88 0.00 0.00 3.16
5195 8525 1.377366 TTGAGGTTTTCGCGGCAACA 61.377 50.000 18.88 4.47 0.00 3.33
5196 8526 0.933047 GTTGAGGTTTTCGCGGCAAC 60.933 55.000 6.13 9.59 0.00 4.17
5197 8527 1.357334 GTTGAGGTTTTCGCGGCAA 59.643 52.632 6.13 0.00 0.00 4.52
5198 8528 1.169661 ATGTTGAGGTTTTCGCGGCA 61.170 50.000 6.13 0.00 0.00 5.69
5199 8529 0.800012 TATGTTGAGGTTTTCGCGGC 59.200 50.000 6.13 0.00 0.00 6.53
5200 8530 2.031683 GGATATGTTGAGGTTTTCGCGG 59.968 50.000 6.13 0.00 0.00 6.46
5201 8531 2.031683 GGGATATGTTGAGGTTTTCGCG 59.968 50.000 0.00 0.00 0.00 5.87
5202 8532 3.279434 AGGGATATGTTGAGGTTTTCGC 58.721 45.455 0.00 0.00 0.00 4.70
5203 8533 4.770795 AGAGGGATATGTTGAGGTTTTCG 58.229 43.478 0.00 0.00 0.00 3.46
5204 8534 8.624776 CATTTAGAGGGATATGTTGAGGTTTTC 58.375 37.037 0.00 0.00 0.00 2.29
5205 8535 7.561356 CCATTTAGAGGGATATGTTGAGGTTTT 59.439 37.037 0.00 0.00 0.00 2.43
5206 8536 7.062957 CCATTTAGAGGGATATGTTGAGGTTT 58.937 38.462 0.00 0.00 0.00 3.27
5207 8537 6.605119 CCATTTAGAGGGATATGTTGAGGTT 58.395 40.000 0.00 0.00 0.00 3.50
5208 8538 5.456763 GCCATTTAGAGGGATATGTTGAGGT 60.457 44.000 0.00 0.00 0.00 3.85
5209 8539 5.006386 GCCATTTAGAGGGATATGTTGAGG 58.994 45.833 0.00 0.00 0.00 3.86
5210 8540 5.874093 AGCCATTTAGAGGGATATGTTGAG 58.126 41.667 0.00 0.00 0.00 3.02
5211 8541 5.912149 AGCCATTTAGAGGGATATGTTGA 57.088 39.130 0.00 0.00 0.00 3.18
5212 8542 8.463930 TTTTAGCCATTTAGAGGGATATGTTG 57.536 34.615 0.00 0.00 26.40 3.33
5235 8565 2.037121 CTGGAGGGTTTTGCCGATTTTT 59.963 45.455 0.00 0.00 38.44 1.94
5236 8566 1.618343 CTGGAGGGTTTTGCCGATTTT 59.382 47.619 0.00 0.00 38.44 1.82
5237 8567 1.203001 TCTGGAGGGTTTTGCCGATTT 60.203 47.619 0.00 0.00 38.44 2.17
5238 8568 0.404040 TCTGGAGGGTTTTGCCGATT 59.596 50.000 0.00 0.00 38.44 3.34
5239 8569 0.404040 TTCTGGAGGGTTTTGCCGAT 59.596 50.000 0.00 0.00 38.44 4.18
5240 8570 0.183971 TTTCTGGAGGGTTTTGCCGA 59.816 50.000 0.00 0.00 38.44 5.54
5241 8571 1.202348 GATTTCTGGAGGGTTTTGCCG 59.798 52.381 0.00 0.00 38.44 5.69
5242 8572 2.247358 TGATTTCTGGAGGGTTTTGCC 58.753 47.619 0.00 0.00 0.00 4.52
5243 8573 3.766051 AGATGATTTCTGGAGGGTTTTGC 59.234 43.478 0.00 0.00 31.79 3.68
5244 8574 5.259632 AGAGATGATTTCTGGAGGGTTTTG 58.740 41.667 0.00 0.00 33.74 2.44
5245 8575 5.504853 GAGAGATGATTTCTGGAGGGTTTT 58.495 41.667 0.00 0.00 33.74 2.43
5246 8576 4.080072 GGAGAGATGATTTCTGGAGGGTTT 60.080 45.833 0.00 0.00 33.74 3.27
5247 8577 3.457749 GGAGAGATGATTTCTGGAGGGTT 59.542 47.826 0.00 0.00 33.74 4.11
5248 8578 3.044894 GGAGAGATGATTTCTGGAGGGT 58.955 50.000 0.00 0.00 33.74 4.34
5249 8579 2.371510 GGGAGAGATGATTTCTGGAGGG 59.628 54.545 0.00 0.00 33.74 4.30
5250 8580 3.044156 TGGGAGAGATGATTTCTGGAGG 58.956 50.000 0.00 0.00 33.74 4.30
5251 8581 3.181456 GGTGGGAGAGATGATTTCTGGAG 60.181 52.174 0.00 0.00 33.74 3.86
5252 8582 2.774234 GGTGGGAGAGATGATTTCTGGA 59.226 50.000 0.00 0.00 33.74 3.86
5253 8583 2.507058 TGGTGGGAGAGATGATTTCTGG 59.493 50.000 0.00 0.00 33.74 3.86
5254 8584 3.453717 TCTGGTGGGAGAGATGATTTCTG 59.546 47.826 0.00 0.00 33.74 3.02
5255 8585 3.729108 TCTGGTGGGAGAGATGATTTCT 58.271 45.455 0.00 0.00 37.41 2.52
5256 8586 4.494091 TTCTGGTGGGAGAGATGATTTC 57.506 45.455 0.00 0.00 0.00 2.17
5257 8587 4.934797 TTTCTGGTGGGAGAGATGATTT 57.065 40.909 0.00 0.00 0.00 2.17
5258 8588 4.934797 TTTTCTGGTGGGAGAGATGATT 57.065 40.909 0.00 0.00 0.00 2.57
5259 8589 5.463051 AATTTTCTGGTGGGAGAGATGAT 57.537 39.130 0.00 0.00 0.00 2.45
5260 8590 4.934797 AATTTTCTGGTGGGAGAGATGA 57.065 40.909 0.00 0.00 0.00 2.92
5261 8591 5.105595 GGAAAATTTTCTGGTGGGAGAGATG 60.106 44.000 25.86 0.00 37.35 2.90
5262 8592 5.019470 GGAAAATTTTCTGGTGGGAGAGAT 58.981 41.667 25.86 0.00 37.35 2.75
5263 8593 4.407365 GGAAAATTTTCTGGTGGGAGAGA 58.593 43.478 25.86 0.00 37.35 3.10
5264 8594 3.191371 CGGAAAATTTTCTGGTGGGAGAG 59.809 47.826 25.89 6.17 39.36 3.20
5265 8595 3.153919 CGGAAAATTTTCTGGTGGGAGA 58.846 45.455 25.89 0.00 39.36 3.71
5266 8596 2.352715 GCGGAAAATTTTCTGGTGGGAG 60.353 50.000 31.32 14.58 42.46 4.30
5267 8597 1.616374 GCGGAAAATTTTCTGGTGGGA 59.384 47.619 31.32 0.00 42.46 4.37
5268 8598 1.337728 GGCGGAAAATTTTCTGGTGGG 60.338 52.381 31.32 15.59 42.46 4.61
5269 8599 1.342819 TGGCGGAAAATTTTCTGGTGG 59.657 47.619 31.32 16.92 42.46 4.61
5270 8600 2.810439 TGGCGGAAAATTTTCTGGTG 57.190 45.000 31.32 19.20 42.46 4.17
5271 8601 4.064388 CAAATGGCGGAAAATTTTCTGGT 58.936 39.130 31.32 12.92 42.46 4.00
5272 8602 3.120234 GCAAATGGCGGAAAATTTTCTGG 60.120 43.478 31.32 22.60 42.46 3.86
5273 8603 3.120234 GGCAAATGGCGGAAAATTTTCTG 60.120 43.478 28.20 28.20 46.16 3.02
5274 8604 3.073678 GGCAAATGGCGGAAAATTTTCT 58.926 40.909 25.86 7.25 46.16 2.52
5275 8605 3.469899 GGCAAATGGCGGAAAATTTTC 57.530 42.857 20.51 20.51 46.16 2.29
5286 8616 1.592400 GGCAATAGCGGCAAATGGC 60.592 57.895 1.45 4.41 43.41 4.40
5287 8617 1.067916 GGGCAATAGCGGCAAATGG 59.932 57.895 1.45 0.00 43.41 3.16
5288 8618 1.299316 CGGGCAATAGCGGCAAATG 60.299 57.895 1.45 0.00 43.41 2.32
5289 8619 3.119193 CGGGCAATAGCGGCAAAT 58.881 55.556 1.45 0.00 43.41 2.32
5290 8620 2.878089 TAGCGGGCAATAGCGGCAAA 62.878 55.000 1.45 0.00 41.56 3.68
5291 8621 2.674563 ATAGCGGGCAATAGCGGCAA 62.675 55.000 1.45 0.00 41.56 4.52
5292 8622 3.177194 ATAGCGGGCAATAGCGGCA 62.177 57.895 1.45 0.00 41.56 5.69
5293 8623 2.358737 ATAGCGGGCAATAGCGGC 60.359 61.111 0.00 0.00 43.41 6.53
5294 8624 2.034879 CCATAGCGGGCAATAGCGG 61.035 63.158 0.00 0.00 43.41 5.52
5295 8625 3.566261 CCATAGCGGGCAATAGCG 58.434 61.111 0.00 0.00 43.41 4.26
5306 8636 1.519455 CTATAGCGGCCGCCATAGC 60.519 63.158 39.53 19.64 43.17 2.97
5307 8637 1.519455 GCTATAGCGGCCGCCATAG 60.519 63.158 42.63 42.63 42.74 2.23
5308 8638 2.577059 GCTATAGCGGCCGCCATA 59.423 61.111 44.47 37.39 43.17 2.74
5318 8648 1.676384 CTCCCCCAGCAGCTATAGC 59.324 63.158 17.33 17.33 42.49 2.97
5319 8649 1.835927 GCCTCCCCCAGCAGCTATAG 61.836 65.000 0.00 0.00 0.00 1.31
5320 8650 1.843376 GCCTCCCCCAGCAGCTATA 60.843 63.158 0.00 0.00 0.00 1.31
5321 8651 3.174265 GCCTCCCCCAGCAGCTAT 61.174 66.667 0.00 0.00 0.00 2.97
5335 8665 4.856801 ATGATTTCGCGGCGGCCT 62.857 61.111 23.46 6.88 35.02 5.19
5336 8666 3.409959 AAATGATTTCGCGGCGGCC 62.410 57.895 23.46 9.54 35.02 6.13
5337 8667 1.939299 GAAATGATTTCGCGGCGGC 60.939 57.895 23.46 6.12 0.00 6.53
5338 8668 0.316196 GAGAAATGATTTCGCGGCGG 60.316 55.000 23.46 3.89 44.29 6.13
5339 8669 0.316196 GGAGAAATGATTTCGCGGCG 60.316 55.000 17.70 17.70 44.29 6.46
5340 8670 0.029433 GGGAGAAATGATTTCGCGGC 59.971 55.000 13.97 3.19 44.29 6.53
5341 8671 0.304705 CGGGAGAAATGATTTCGCGG 59.695 55.000 13.97 6.33 44.29 6.46
5342 8672 0.316196 GCGGGAGAAATGATTTCGCG 60.316 55.000 13.97 12.28 46.09 5.87
5343 8673 0.316196 CGCGGGAGAAATGATTTCGC 60.316 55.000 12.37 12.37 44.29 4.70
5344 8674 1.286501 TCGCGGGAGAAATGATTTCG 58.713 50.000 6.13 2.68 44.29 3.46
5345 8675 3.971032 AATCGCGGGAGAAATGATTTC 57.029 42.857 9.82 9.82 39.96 2.17
5346 8676 4.718940 AAAATCGCGGGAGAAATGATTT 57.281 36.364 6.13 0.00 40.05 2.17
5347 8677 5.828299 TTAAAATCGCGGGAGAAATGATT 57.172 34.783 6.13 0.00 0.00 2.57
5348 8678 5.048713 GGATTAAAATCGCGGGAGAAATGAT 60.049 40.000 6.13 0.00 36.27 2.45
5349 8679 4.274950 GGATTAAAATCGCGGGAGAAATGA 59.725 41.667 6.13 0.00 36.27 2.57
5350 8680 4.036262 TGGATTAAAATCGCGGGAGAAATG 59.964 41.667 6.13 0.00 36.27 2.32
5351 8681 4.204012 TGGATTAAAATCGCGGGAGAAAT 58.796 39.130 6.13 4.88 36.27 2.17
5352 8682 3.611970 TGGATTAAAATCGCGGGAGAAA 58.388 40.909 6.13 0.00 36.27 2.52
5353 8683 3.269538 TGGATTAAAATCGCGGGAGAA 57.730 42.857 6.13 0.05 36.27 2.87
5354 8684 2.992124 TGGATTAAAATCGCGGGAGA 57.008 45.000 6.13 0.00 36.27 3.71
5355 8685 2.226437 CCATGGATTAAAATCGCGGGAG 59.774 50.000 5.56 0.00 36.27 4.30
5356 8686 2.226330 CCATGGATTAAAATCGCGGGA 58.774 47.619 5.56 4.03 36.27 5.14
5357 8687 1.953686 ACCATGGATTAAAATCGCGGG 59.046 47.619 21.47 0.00 36.27 6.13
5358 8688 3.708563 AACCATGGATTAAAATCGCGG 57.291 42.857 21.47 0.70 36.27 6.46
5359 8689 5.666969 TCTAACCATGGATTAAAATCGCG 57.333 39.130 21.47 0.00 36.27 5.87
5360 8690 6.363357 GCATTCTAACCATGGATTAAAATCGC 59.637 38.462 21.47 12.74 36.27 4.58
5361 8691 7.592533 CAGCATTCTAACCATGGATTAAAATCG 59.407 37.037 21.47 7.98 36.27 3.34
5362 8692 8.632679 TCAGCATTCTAACCATGGATTAAAATC 58.367 33.333 21.47 1.68 34.66 2.17
5363 8693 8.537728 TCAGCATTCTAACCATGGATTAAAAT 57.462 30.769 21.47 8.99 0.00 1.82
5364 8694 7.953005 TCAGCATTCTAACCATGGATTAAAA 57.047 32.000 21.47 7.00 0.00 1.52
5365 8695 8.537728 AATCAGCATTCTAACCATGGATTAAA 57.462 30.769 21.47 7.77 0.00 1.52
5366 8696 9.812347 ATAATCAGCATTCTAACCATGGATTAA 57.188 29.630 21.47 5.32 31.07 1.40
5367 8697 9.812347 AATAATCAGCATTCTAACCATGGATTA 57.188 29.630 21.47 12.15 31.62 1.75
5368 8698 8.716674 AATAATCAGCATTCTAACCATGGATT 57.283 30.769 21.47 11.61 0.00 3.01
5369 8699 7.395489 GGAATAATCAGCATTCTAACCATGGAT 59.605 37.037 21.47 9.83 33.70 3.41
5370 8700 6.716628 GGAATAATCAGCATTCTAACCATGGA 59.283 38.462 21.47 0.00 33.70 3.41
5371 8701 6.718454 AGGAATAATCAGCATTCTAACCATGG 59.282 38.462 11.19 11.19 33.70 3.66
5372 8702 7.664731 AGAGGAATAATCAGCATTCTAACCATG 59.335 37.037 0.00 0.00 33.70 3.66
5373 8703 7.753630 AGAGGAATAATCAGCATTCTAACCAT 58.246 34.615 0.00 0.00 33.70 3.55
5374 8704 7.141758 AGAGGAATAATCAGCATTCTAACCA 57.858 36.000 0.00 0.00 33.70 3.67
5375 8705 8.348507 CAAAGAGGAATAATCAGCATTCTAACC 58.651 37.037 0.00 0.00 33.70 2.85
5376 8706 9.113838 TCAAAGAGGAATAATCAGCATTCTAAC 57.886 33.333 0.00 0.00 33.70 2.34
5377 8707 9.857656 ATCAAAGAGGAATAATCAGCATTCTAA 57.142 29.630 0.00 0.00 33.70 2.10
5378 8708 9.857656 AATCAAAGAGGAATAATCAGCATTCTA 57.142 29.630 0.00 0.00 33.70 2.10
5379 8709 8.763984 AATCAAAGAGGAATAATCAGCATTCT 57.236 30.769 0.00 0.00 33.70 2.40
5380 8710 9.245962 CAAATCAAAGAGGAATAATCAGCATTC 57.754 33.333 0.00 0.00 0.00 2.67
5381 8711 7.709613 GCAAATCAAAGAGGAATAATCAGCATT 59.290 33.333 0.00 0.00 0.00 3.56
5382 8712 7.069578 AGCAAATCAAAGAGGAATAATCAGCAT 59.930 33.333 0.00 0.00 0.00 3.79
5383 8713 6.379133 AGCAAATCAAAGAGGAATAATCAGCA 59.621 34.615 0.00 0.00 0.00 4.41
5384 8714 6.803642 AGCAAATCAAAGAGGAATAATCAGC 58.196 36.000 0.00 0.00 0.00 4.26
5385 8715 7.222224 GCAAGCAAATCAAAGAGGAATAATCAG 59.778 37.037 0.00 0.00 0.00 2.90
5386 8716 7.037438 GCAAGCAAATCAAAGAGGAATAATCA 58.963 34.615 0.00 0.00 0.00 2.57
5387 8717 7.037438 TGCAAGCAAATCAAAGAGGAATAATC 58.963 34.615 0.00 0.00 0.00 1.75
5388 8718 6.938507 TGCAAGCAAATCAAAGAGGAATAAT 58.061 32.000 0.00 0.00 0.00 1.28
5389 8719 6.343716 TGCAAGCAAATCAAAGAGGAATAA 57.656 33.333 0.00 0.00 0.00 1.40
5390 8720 5.981088 TGCAAGCAAATCAAAGAGGAATA 57.019 34.783 0.00 0.00 0.00 1.75
5400 8731 3.898380 CAGCCTTGCAAGCAAATCA 57.102 47.368 21.43 0.00 35.33 2.57
5801 9162 5.324409 AGTCCAATTTGCTTCTCCAACATA 58.676 37.500 0.00 0.00 0.00 2.29
5945 9306 0.329596 GGTCATTCCTTGGACAGGCT 59.670 55.000 0.00 0.00 43.55 4.58
6024 9385 9.178758 CAATGACCAATCATCATCATCATAGAT 57.821 33.333 0.00 0.00 45.26 1.98
6098 9459 0.321653 GAATGGTCCACTCCAGCGTT 60.322 55.000 0.00 0.00 41.05 4.84
6306 9667 1.839354 GGGACGTAAATACAAGGGGGA 59.161 52.381 0.00 0.00 0.00 4.81
6517 9884 7.223582 AGACATAGCTTCGTGATTCTTTGTATG 59.776 37.037 0.00 0.00 0.00 2.39
6588 9961 7.172875 ACTGTCGTACTACACCATCATACTATC 59.827 40.741 0.00 0.00 0.00 2.08
6591 9964 5.066117 CACTGTCGTACTACACCATCATACT 59.934 44.000 0.00 0.00 0.00 2.12
6602 9975 3.731264 GCTGATGGTCACTGTCGTACTAC 60.731 52.174 0.00 0.00 0.00 2.73
6603 9976 2.422479 GCTGATGGTCACTGTCGTACTA 59.578 50.000 0.00 0.00 0.00 1.82
6604 9977 1.202582 GCTGATGGTCACTGTCGTACT 59.797 52.381 0.00 0.00 0.00 2.73
6609 9982 0.610174 TGGAGCTGATGGTCACTGTC 59.390 55.000 0.00 0.00 42.05 3.51
6623 9996 1.463444 GTTGTATGACACGGTTGGAGC 59.537 52.381 0.00 0.00 0.00 4.70
6765 10149 7.176515 TCTCATAAAGGCATTGCTTGAAGTTTA 59.823 33.333 8.82 0.00 0.00 2.01
6986 10616 3.333189 CGTCGGCCTGATCATGCG 61.333 66.667 15.57 11.37 0.00 4.73
7007 10637 1.210931 CATGTTGGTGAGCGGCTTG 59.789 57.895 2.97 0.00 0.00 4.01
7008 10638 1.973281 CCATGTTGGTGAGCGGCTT 60.973 57.895 2.97 0.00 31.35 4.35
7009 10639 2.360350 CCATGTTGGTGAGCGGCT 60.360 61.111 0.00 0.00 31.35 5.52
7010 10640 4.120331 GCCATGTTGGTGAGCGGC 62.120 66.667 0.00 0.00 40.46 6.53
7017 10647 1.608590 CAAAGACTTCGCCATGTTGGT 59.391 47.619 0.00 0.00 40.46 3.67
7018 10648 1.879380 TCAAAGACTTCGCCATGTTGG 59.121 47.619 0.00 0.00 41.55 3.77
7019 10649 3.837213 ATCAAAGACTTCGCCATGTTG 57.163 42.857 0.00 0.00 0.00 3.33
7021 10651 2.489329 CCAATCAAAGACTTCGCCATGT 59.511 45.455 0.00 0.00 0.00 3.21
7022 10652 2.749076 TCCAATCAAAGACTTCGCCATG 59.251 45.455 0.00 0.00 0.00 3.66
7023 10653 3.071874 TCCAATCAAAGACTTCGCCAT 57.928 42.857 0.00 0.00 0.00 4.40
7024 10654 2.552315 GTTCCAATCAAAGACTTCGCCA 59.448 45.455 0.00 0.00 0.00 5.69
7026 10656 2.478894 TCGTTCCAATCAAAGACTTCGC 59.521 45.455 0.00 0.00 0.00 4.70
7028 10658 4.904154 CGTTTCGTTCCAATCAAAGACTTC 59.096 41.667 0.00 0.00 0.00 3.01
7029 10659 4.261031 CCGTTTCGTTCCAATCAAAGACTT 60.261 41.667 0.00 0.00 0.00 3.01
7030 10660 3.250040 CCGTTTCGTTCCAATCAAAGACT 59.750 43.478 0.00 0.00 0.00 3.24
7031 10661 3.002965 ACCGTTTCGTTCCAATCAAAGAC 59.997 43.478 0.00 0.00 0.00 3.01
7032 10662 3.207778 ACCGTTTCGTTCCAATCAAAGA 58.792 40.909 0.00 0.00 0.00 2.52
7033 10663 3.002862 TGACCGTTTCGTTCCAATCAAAG 59.997 43.478 0.00 0.00 0.00 2.77
7036 10666 1.868498 GTGACCGTTTCGTTCCAATCA 59.132 47.619 0.00 0.00 0.00 2.57
7037 10667 1.196127 GGTGACCGTTTCGTTCCAATC 59.804 52.381 0.00 0.00 0.00 2.67
7038 10668 1.232119 GGTGACCGTTTCGTTCCAAT 58.768 50.000 0.00 0.00 0.00 3.16
7039 10669 0.107800 TGGTGACCGTTTCGTTCCAA 60.108 50.000 0.00 0.00 0.00 3.53
7040 10670 0.810823 GTGGTGACCGTTTCGTTCCA 60.811 55.000 0.00 0.00 0.00 3.53
7041 10671 1.501337 GGTGGTGACCGTTTCGTTCC 61.501 60.000 0.00 0.00 30.61 3.62
7042 10672 1.936658 GGTGGTGACCGTTTCGTTC 59.063 57.895 0.00 0.00 30.61 3.95
7051 10681 2.027469 ACTTAGGATTTCGGTGGTGACC 60.027 50.000 0.00 0.00 39.14 4.02
7052 10682 3.329929 ACTTAGGATTTCGGTGGTGAC 57.670 47.619 0.00 0.00 0.00 3.67
7054 10684 3.190535 CCAAACTTAGGATTTCGGTGGTG 59.809 47.826 0.00 0.00 0.00 4.17
7056 10686 2.752903 CCCAAACTTAGGATTTCGGTGG 59.247 50.000 0.00 0.00 0.00 4.61
7057 10687 2.752903 CCCCAAACTTAGGATTTCGGTG 59.247 50.000 0.00 0.00 0.00 4.94
7058 10688 2.645797 TCCCCAAACTTAGGATTTCGGT 59.354 45.455 0.00 0.00 0.00 4.69
7059 10689 3.279434 CTCCCCAAACTTAGGATTTCGG 58.721 50.000 0.00 0.00 0.00 4.30
7060 10690 3.054655 TCCTCCCCAAACTTAGGATTTCG 60.055 47.826 0.00 0.00 33.18 3.46
7061 10691 4.586306 TCCTCCCCAAACTTAGGATTTC 57.414 45.455 0.00 0.00 33.18 2.17
7062 10692 4.264397 CCTTCCTCCCCAAACTTAGGATTT 60.264 45.833 0.00 0.00 37.94 2.17
7063 10693 3.269643 CCTTCCTCCCCAAACTTAGGATT 59.730 47.826 0.00 0.00 37.94 3.01
7064 10694 2.853077 CCTTCCTCCCCAAACTTAGGAT 59.147 50.000 0.00 0.00 37.94 3.24
7065 10695 2.157911 TCCTTCCTCCCCAAACTTAGGA 60.158 50.000 0.00 0.00 36.34 2.94
7066 10696 2.026169 GTCCTTCCTCCCCAAACTTAGG 60.026 54.545 0.00 0.00 0.00 2.69
7067 10697 2.642807 TGTCCTTCCTCCCCAAACTTAG 59.357 50.000 0.00 0.00 0.00 2.18
7071 10701 2.375014 TTTGTCCTTCCTCCCCAAAC 57.625 50.000 0.00 0.00 0.00 2.93
7072 10702 2.492567 CCATTTGTCCTTCCTCCCCAAA 60.493 50.000 0.00 0.00 0.00 3.28
7073 10703 1.077005 CCATTTGTCCTTCCTCCCCAA 59.923 52.381 0.00 0.00 0.00 4.12
7074 10704 0.704076 CCATTTGTCCTTCCTCCCCA 59.296 55.000 0.00 0.00 0.00 4.96
7075 10705 0.684479 GCCATTTGTCCTTCCTCCCC 60.684 60.000 0.00 0.00 0.00 4.81
7076 10706 0.039618 TGCCATTTGTCCTTCCTCCC 59.960 55.000 0.00 0.00 0.00 4.30
7077 10707 1.272147 ACTGCCATTTGTCCTTCCTCC 60.272 52.381 0.00 0.00 0.00 4.30
7078 10708 2.206576 ACTGCCATTTGTCCTTCCTC 57.793 50.000 0.00 0.00 0.00 3.71
7079 10709 2.158475 TCAACTGCCATTTGTCCTTCCT 60.158 45.455 0.00 0.00 0.00 3.36
7080 10710 2.238521 TCAACTGCCATTTGTCCTTCC 58.761 47.619 0.00 0.00 0.00 3.46
7081 10711 3.367703 CCATCAACTGCCATTTGTCCTTC 60.368 47.826 0.00 0.00 0.00 3.46
7083 10713 2.173519 CCATCAACTGCCATTTGTCCT 58.826 47.619 0.00 0.00 0.00 3.85
7084 10714 1.404583 GCCATCAACTGCCATTTGTCC 60.405 52.381 0.00 0.00 0.00 4.02
7085 10715 1.547372 AGCCATCAACTGCCATTTGTC 59.453 47.619 0.00 0.00 0.00 3.18
7086 10716 1.636148 AGCCATCAACTGCCATTTGT 58.364 45.000 0.00 0.00 0.00 2.83
7087 10717 2.756760 ACTAGCCATCAACTGCCATTTG 59.243 45.455 0.00 0.00 0.00 2.32
7088 10718 3.019564 GACTAGCCATCAACTGCCATTT 58.980 45.455 0.00 0.00 0.00 2.32
7089 10719 2.240667 AGACTAGCCATCAACTGCCATT 59.759 45.455 0.00 0.00 0.00 3.16
7090 10720 1.842562 AGACTAGCCATCAACTGCCAT 59.157 47.619 0.00 0.00 0.00 4.40
7091 10721 1.279496 AGACTAGCCATCAACTGCCA 58.721 50.000 0.00 0.00 0.00 4.92
7092 10722 2.799917 CGTAGACTAGCCATCAACTGCC 60.800 54.545 0.00 0.00 0.00 4.85
7093 10723 2.159226 ACGTAGACTAGCCATCAACTGC 60.159 50.000 0.00 0.00 0.00 4.40
7094 10724 3.784701 ACGTAGACTAGCCATCAACTG 57.215 47.619 0.00 0.00 0.00 3.16
7095 10725 5.191426 TCTAACGTAGACTAGCCATCAACT 58.809 41.667 0.00 0.00 0.00 3.16
7096 10726 5.496133 TCTAACGTAGACTAGCCATCAAC 57.504 43.478 0.00 0.00 0.00 3.18
7098 10728 5.238868 GTCATCTAACGTAGACTAGCCATCA 59.761 44.000 0.00 0.00 37.69 3.07
7099 10729 5.238868 TGTCATCTAACGTAGACTAGCCATC 59.761 44.000 0.00 0.00 37.69 3.51
7100 10730 5.131067 TGTCATCTAACGTAGACTAGCCAT 58.869 41.667 0.00 0.00 37.69 4.40
7101 10731 4.520179 TGTCATCTAACGTAGACTAGCCA 58.480 43.478 0.00 0.00 37.69 4.75
7102 10732 5.238868 TGATGTCATCTAACGTAGACTAGCC 59.761 44.000 13.90 0.00 37.69 3.93
7103 10733 6.301687 TGATGTCATCTAACGTAGACTAGC 57.698 41.667 13.90 0.00 37.69 3.42
7137 10767 4.570663 GGACGGCGGATCTGGTCG 62.571 72.222 13.24 6.72 38.70 4.79
7138 10768 3.140225 GAGGACGGCGGATCTGGTC 62.140 68.421 13.24 3.11 0.00 4.02
7139 10769 3.148279 GAGGACGGCGGATCTGGT 61.148 66.667 13.24 0.00 0.00 4.00
7140 10770 4.271816 CGAGGACGGCGGATCTGG 62.272 72.222 13.24 2.90 35.72 3.86
7141 10771 4.933064 GCGAGGACGGCGGATCTG 62.933 72.222 13.24 0.00 40.15 2.90
7158 10788 3.814842 TCGTTATGATTTGCTGCCATAGG 59.185 43.478 0.00 0.00 0.00 2.57
7160 10790 3.814842 CCTCGTTATGATTTGCTGCCATA 59.185 43.478 0.00 0.00 0.00 2.74
7161 10791 2.620115 CCTCGTTATGATTTGCTGCCAT 59.380 45.455 0.00 0.00 0.00 4.40
7162 10792 2.016318 CCTCGTTATGATTTGCTGCCA 58.984 47.619 0.00 0.00 0.00 4.92
7163 10793 1.334869 CCCTCGTTATGATTTGCTGCC 59.665 52.381 0.00 0.00 0.00 4.85
7165 10795 2.917933 TCCCCTCGTTATGATTTGCTG 58.082 47.619 0.00 0.00 0.00 4.41
7166 10796 3.644966 TTCCCCTCGTTATGATTTGCT 57.355 42.857 0.00 0.00 0.00 3.91
7167 10797 4.712122 TTTTCCCCTCGTTATGATTTGC 57.288 40.909 0.00 0.00 0.00 3.68
7168 10798 6.019779 TGTTTTTCCCCTCGTTATGATTTG 57.980 37.500 0.00 0.00 0.00 2.32
7169 10799 6.435904 TCATGTTTTTCCCCTCGTTATGATTT 59.564 34.615 0.00 0.00 0.00 2.17
7173 10803 4.142469 GGTCATGTTTTTCCCCTCGTTATG 60.142 45.833 0.00 0.00 0.00 1.90
7174 10804 4.014406 GGTCATGTTTTTCCCCTCGTTAT 58.986 43.478 0.00 0.00 0.00 1.89
7175 10805 3.414269 GGTCATGTTTTTCCCCTCGTTA 58.586 45.455 0.00 0.00 0.00 3.18
7177 10807 1.880646 CGGTCATGTTTTTCCCCTCGT 60.881 52.381 0.00 0.00 0.00 4.18
7179 10809 0.526211 GCGGTCATGTTTTTCCCCTC 59.474 55.000 0.00 0.00 0.00 4.30
7180 10810 0.898326 GGCGGTCATGTTTTTCCCCT 60.898 55.000 0.00 0.00 0.00 4.79
7182 10812 0.038618 GTGGCGGTCATGTTTTTCCC 60.039 55.000 0.00 0.00 0.00 3.97
7183 10813 0.038618 GGTGGCGGTCATGTTTTTCC 60.039 55.000 0.00 0.00 0.00 3.13
7185 10815 1.000731 CATGGTGGCGGTCATGTTTTT 59.999 47.619 0.00 0.00 36.82 1.94
7188 10818 2.342650 GCATGGTGGCGGTCATGTT 61.343 57.895 13.34 0.00 41.83 2.71
7189 10819 2.751436 GCATGGTGGCGGTCATGT 60.751 61.111 13.34 0.00 41.83 3.21
7190 10820 1.669049 AATGCATGGTGGCGGTCATG 61.669 55.000 0.00 9.25 42.47 3.07
7191 10821 1.380246 AATGCATGGTGGCGGTCAT 60.380 52.632 0.00 0.00 36.28 3.06
7193 10823 2.491152 CAATGCATGGTGGCGGTC 59.509 61.111 0.00 0.00 36.28 4.79
7195 10825 3.420214 GAGCAATGCATGGTGGCGG 62.420 63.158 8.35 0.00 40.59 6.13
7196 10826 2.103538 GAGCAATGCATGGTGGCG 59.896 61.111 8.35 0.00 40.59 5.69
7197 10827 1.375853 TACGAGCAATGCATGGTGGC 61.376 55.000 8.35 2.10 40.59 5.01
7198 10828 0.659427 CTACGAGCAATGCATGGTGG 59.341 55.000 8.35 4.47 40.59 4.61
7199 10829 0.028505 GCTACGAGCAATGCATGGTG 59.971 55.000 8.35 0.00 41.89 4.17
7200 10830 2.397751 GCTACGAGCAATGCATGGT 58.602 52.632 8.35 4.51 41.89 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.