Multiple sequence alignment - TraesCS3D01G224700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G224700 chr3D 100.000 4200 0 0 1 4200 305883098 305878899 0.000000e+00 7757.0
1 TraesCS3D01G224700 chr3D 87.965 565 62 5 7 566 382945248 382944685 0.000000e+00 662.0
2 TraesCS3D01G224700 chr3D 86.806 576 70 5 1 571 512502997 512503571 4.580000e-179 638.0
3 TraesCS3D01G224700 chr3B 94.155 1745 83 10 1217 2959 415897840 415899567 0.000000e+00 2639.0
4 TraesCS3D01G224700 chr3B 90.334 569 20 16 647 1198 415897304 415897854 0.000000e+00 713.0
5 TraesCS3D01G224700 chr3B 82.900 807 83 27 3424 4181 415918417 415919217 0.000000e+00 675.0
6 TraesCS3D01G224700 chr3B 88.257 545 59 4 11 551 585029335 585028792 0.000000e+00 647.0
7 TraesCS3D01G224700 chr3B 90.000 100 10 0 3092 3191 415900999 415901098 3.410000e-26 130.0
8 TraesCS3D01G224700 chr3B 98.214 56 1 0 3037 3092 415899563 415899618 9.610000e-17 99.0
9 TraesCS3D01G224700 chr3A 91.743 1756 116 13 1217 2959 423976963 423975224 0.000000e+00 2412.0
10 TraesCS3D01G224700 chr3A 85.619 598 31 22 613 1202 423977495 423976945 1.010000e-160 577.0
11 TraesCS3D01G224700 chr3A 87.500 64 7 1 3620 3682 423972060 423971997 5.820000e-09 73.1
12 TraesCS3D01G224700 chr5B 88.908 568 58 4 9 571 577250218 577250785 0.000000e+00 695.0
13 TraesCS3D01G224700 chr5D 87.125 567 66 5 12 573 264075979 264075415 1.650000e-178 636.0
14 TraesCS3D01G224700 chr2D 87.365 554 56 12 11 556 650765731 650766278 1.280000e-174 623.0
15 TraesCS3D01G224700 chr2D 87.368 95 10 2 2952 3045 150380650 150380743 1.600000e-19 108.0
16 TraesCS3D01G224700 chr2D 87.500 96 6 6 2947 3040 592631086 592630995 5.740000e-19 106.0
17 TraesCS3D01G224700 chr4D 86.572 566 69 6 7 566 445089262 445088698 5.970000e-173 617.0
18 TraesCS3D01G224700 chr4D 87.778 90 10 1 2955 3043 423945313 423945402 2.070000e-18 104.0
19 TraesCS3D01G224700 chr7D 86.444 568 70 6 1 563 469884057 469884622 2.150000e-172 616.0
20 TraesCS3D01G224700 chr1A 86.572 566 66 7 7 566 462034767 462035328 2.150000e-172 616.0
21 TraesCS3D01G224700 chr1D 88.889 90 9 1 2955 3043 415688357 415688446 4.440000e-20 110.0
22 TraesCS3D01G224700 chr6A 86.735 98 11 2 2956 3052 190660350 190660446 1.600000e-19 108.0
23 TraesCS3D01G224700 chr6A 86.735 98 11 2 2956 3052 190738273 190738369 1.600000e-19 108.0
24 TraesCS3D01G224700 chr6A 85.714 98 12 2 2956 3052 190687616 190687712 7.430000e-18 102.0
25 TraesCS3D01G224700 chr6B 87.778 90 10 1 2955 3043 281611962 281611873 2.070000e-18 104.0
26 TraesCS3D01G224700 chr4A 84.762 105 12 4 2940 3043 684976208 684976107 7.430000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G224700 chr3D 305878899 305883098 4199 True 7757.00 7757 100.000000 1 4200 1 chr3D.!!$R1 4199
1 TraesCS3D01G224700 chr3D 382944685 382945248 563 True 662.00 662 87.965000 7 566 1 chr3D.!!$R2 559
2 TraesCS3D01G224700 chr3D 512502997 512503571 574 False 638.00 638 86.806000 1 571 1 chr3D.!!$F1 570
3 TraesCS3D01G224700 chr3B 415897304 415901098 3794 False 895.25 2639 93.175750 647 3191 4 chr3B.!!$F2 2544
4 TraesCS3D01G224700 chr3B 415918417 415919217 800 False 675.00 675 82.900000 3424 4181 1 chr3B.!!$F1 757
5 TraesCS3D01G224700 chr3B 585028792 585029335 543 True 647.00 647 88.257000 11 551 1 chr3B.!!$R1 540
6 TraesCS3D01G224700 chr3A 423971997 423977495 5498 True 1020.70 2412 88.287333 613 3682 3 chr3A.!!$R1 3069
7 TraesCS3D01G224700 chr5B 577250218 577250785 567 False 695.00 695 88.908000 9 571 1 chr5B.!!$F1 562
8 TraesCS3D01G224700 chr5D 264075415 264075979 564 True 636.00 636 87.125000 12 573 1 chr5D.!!$R1 561
9 TraesCS3D01G224700 chr2D 650765731 650766278 547 False 623.00 623 87.365000 11 556 1 chr2D.!!$F2 545
10 TraesCS3D01G224700 chr4D 445088698 445089262 564 True 617.00 617 86.572000 7 566 1 chr4D.!!$R1 559
11 TraesCS3D01G224700 chr7D 469884057 469884622 565 False 616.00 616 86.444000 1 563 1 chr7D.!!$F1 562
12 TraesCS3D01G224700 chr1A 462034767 462035328 561 False 616.00 616 86.572000 7 566 1 chr1A.!!$F1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
601 613 0.036164 GGGGATTTTTGTGGGTTGCC 59.964 55.0 0.0 0.0 0.0 4.52 F
1693 1724 0.376152 CTGGATGTTCATCGCTGCAC 59.624 55.0 0.0 0.0 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2492 2529 0.108992 AATGCTCCGTGCTGCATTTG 60.109 50.0 5.27 0.0 43.53 2.32 R
3411 6218 0.039256 TTTTAGTCGGTCCACGTCGG 60.039 55.0 0.00 0.0 44.69 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
177 181 6.193410 CGCGAACATGAAGATGATAAGTTTTG 59.807 38.462 0.00 0.00 33.36 2.44
184 188 7.765695 TGAAGATGATAAGTTTTGCTTCCTT 57.234 32.000 0.00 0.00 38.57 3.36
207 211 7.011669 CCTTTTGCTCAACTTGTTGATTGATTT 59.988 33.333 15.35 0.00 34.43 2.17
228 232 9.685276 TGATTTATTCACTCAATGTTGGTCTAT 57.315 29.630 0.00 0.00 0.00 1.98
254 258 1.939769 TATGTAGCTCACACGCGCCA 61.940 55.000 5.73 0.00 40.86 5.69
319 323 5.971202 CACACACTGTTGGATGAAGTTAAAC 59.029 40.000 0.00 0.00 0.00 2.01
399 406 7.522399 CGGGATCTAGTCGAATTAGAGACATTT 60.522 40.741 12.00 0.00 39.67 2.32
404 411 9.140286 TCTAGTCGAATTAGAGACATTTTTGTG 57.860 33.333 0.00 0.00 39.67 3.33
430 438 8.226448 GCTAGACTTAATTTGCATGCTATGTAG 58.774 37.037 20.33 13.95 0.00 2.74
440 450 8.462589 TTTGCATGCTATGTAGGAATGATTTA 57.537 30.769 20.33 0.00 0.00 1.40
516 527 7.759465 TGTCCGATTAATTTAAATGCGGTTTA 58.241 30.769 21.23 12.25 34.25 2.01
544 555 1.696884 TGTGACTAGTGTTGGATGGCA 59.303 47.619 0.00 0.00 0.00 4.92
556 568 0.769873 GGATGGCATCCTCCACATCT 59.230 55.000 34.15 0.00 46.19 2.90
566 578 2.212900 CTCCACATCTGTGTCCGCGA 62.213 60.000 8.23 0.00 44.21 5.87
573 585 2.093306 TCTGTGTCCGCGAATTGAAT 57.907 45.000 8.23 0.00 0.00 2.57
574 586 2.422597 TCTGTGTCCGCGAATTGAATT 58.577 42.857 8.23 0.00 0.00 2.17
575 587 2.159430 TCTGTGTCCGCGAATTGAATTG 59.841 45.455 8.23 0.00 0.00 2.32
576 588 2.147150 TGTGTCCGCGAATTGAATTGA 58.853 42.857 8.23 0.00 0.00 2.57
577 589 2.746904 TGTGTCCGCGAATTGAATTGAT 59.253 40.909 8.23 0.00 0.00 2.57
578 590 3.100817 GTGTCCGCGAATTGAATTGATG 58.899 45.455 8.23 0.00 0.00 3.07
579 591 2.111756 GTCCGCGAATTGAATTGATGC 58.888 47.619 8.23 0.00 0.00 3.91
580 592 1.065401 TCCGCGAATTGAATTGATGCC 59.935 47.619 8.23 0.00 0.00 4.40
581 593 1.202279 CCGCGAATTGAATTGATGCCA 60.202 47.619 8.23 0.00 0.00 4.92
582 594 2.114056 CGCGAATTGAATTGATGCCAG 58.886 47.619 0.00 0.00 0.00 4.85
583 595 2.466846 GCGAATTGAATTGATGCCAGG 58.533 47.619 0.00 0.00 0.00 4.45
584 596 2.800629 GCGAATTGAATTGATGCCAGGG 60.801 50.000 0.00 0.00 0.00 4.45
585 597 2.223876 CGAATTGAATTGATGCCAGGGG 60.224 50.000 0.00 0.00 0.00 4.79
586 598 2.852714 ATTGAATTGATGCCAGGGGA 57.147 45.000 0.00 0.00 0.00 4.81
587 599 2.852714 TTGAATTGATGCCAGGGGAT 57.147 45.000 0.00 0.00 0.00 3.85
588 600 2.852714 TGAATTGATGCCAGGGGATT 57.147 45.000 0.00 0.00 0.00 3.01
589 601 3.119009 TGAATTGATGCCAGGGGATTT 57.881 42.857 0.00 0.00 0.00 2.17
590 602 3.452878 TGAATTGATGCCAGGGGATTTT 58.547 40.909 0.00 0.00 0.00 1.82
591 603 3.845398 TGAATTGATGCCAGGGGATTTTT 59.155 39.130 0.00 0.00 0.00 1.94
592 604 3.918294 ATTGATGCCAGGGGATTTTTG 57.082 42.857 0.00 0.00 0.00 2.44
593 605 2.323999 TGATGCCAGGGGATTTTTGT 57.676 45.000 0.00 0.00 0.00 2.83
594 606 1.901159 TGATGCCAGGGGATTTTTGTG 59.099 47.619 0.00 0.00 0.00 3.33
595 607 1.207811 GATGCCAGGGGATTTTTGTGG 59.792 52.381 0.00 0.00 0.00 4.17
596 608 0.835543 TGCCAGGGGATTTTTGTGGG 60.836 55.000 0.00 0.00 0.00 4.61
597 609 0.835971 GCCAGGGGATTTTTGTGGGT 60.836 55.000 0.00 0.00 0.00 4.51
598 610 1.728323 CCAGGGGATTTTTGTGGGTT 58.272 50.000 0.00 0.00 0.00 4.11
599 611 1.347378 CCAGGGGATTTTTGTGGGTTG 59.653 52.381 0.00 0.00 0.00 3.77
600 612 1.055849 AGGGGATTTTTGTGGGTTGC 58.944 50.000 0.00 0.00 0.00 4.17
601 613 0.036164 GGGGATTTTTGTGGGTTGCC 59.964 55.000 0.00 0.00 0.00 4.52
602 614 0.761802 GGGATTTTTGTGGGTTGCCA 59.238 50.000 0.00 0.00 0.00 4.92
603 615 1.542328 GGGATTTTTGTGGGTTGCCAC 60.542 52.381 0.00 0.00 40.73 5.01
604 616 1.416030 GGATTTTTGTGGGTTGCCACT 59.584 47.619 0.00 0.00 40.92 4.00
605 617 2.630580 GGATTTTTGTGGGTTGCCACTA 59.369 45.455 0.00 0.00 40.92 2.74
606 618 3.306019 GGATTTTTGTGGGTTGCCACTAG 60.306 47.826 0.00 0.00 40.92 2.57
607 619 2.738587 TTTTGTGGGTTGCCACTAGA 57.261 45.000 0.00 0.00 40.92 2.43
608 620 2.270352 TTTGTGGGTTGCCACTAGAG 57.730 50.000 0.00 0.00 40.92 2.43
609 621 1.429930 TTGTGGGTTGCCACTAGAGA 58.570 50.000 0.00 0.00 40.92 3.10
610 622 1.656587 TGTGGGTTGCCACTAGAGAT 58.343 50.000 0.00 0.00 40.92 2.75
611 623 1.278985 TGTGGGTTGCCACTAGAGATG 59.721 52.381 0.00 0.00 40.92 2.90
623 635 5.112686 CCACTAGAGATGCTAAGTTGGTTC 58.887 45.833 0.00 0.00 0.00 3.62
624 636 4.800993 CACTAGAGATGCTAAGTTGGTTCG 59.199 45.833 0.00 0.00 0.00 3.95
644 657 2.159000 CGGTAGGGGGAAGTGTGATAAC 60.159 54.545 0.00 0.00 0.00 1.89
661 674 7.011482 GTGTGATAACATGGGAGACACTATTTC 59.989 40.741 0.00 0.00 0.00 2.17
714 728 9.181805 GCTACACCTTCAGAAAATAAAGAAAAC 57.818 33.333 0.00 0.00 0.00 2.43
746 761 7.042187 GCTTGGATTTGTATCACTCACTGATAG 60.042 40.741 0.00 0.00 41.69 2.08
772 795 5.044428 ACTACAGTCACTGATTCGTGTAC 57.956 43.478 13.14 0.00 36.33 2.90
782 805 4.389992 ACTGATTCGTGTACTCATTTGCTG 59.610 41.667 0.00 0.00 0.00 4.41
835 858 0.388134 ACACGTACGGCTGTGTGATC 60.388 55.000 21.06 0.00 46.87 2.92
846 871 2.732366 CTGTGTGATCCTATTCCGTCG 58.268 52.381 0.00 0.00 0.00 5.12
858 884 3.751246 CCGTCGCTACCCAACCGA 61.751 66.667 0.00 0.00 0.00 4.69
859 885 2.493030 CGTCGCTACCCAACCGAT 59.507 61.111 0.00 0.00 33.24 4.18
860 886 1.876714 CGTCGCTACCCAACCGATG 60.877 63.158 0.00 0.00 33.24 3.84
861 887 2.171725 GTCGCTACCCAACCGATGC 61.172 63.158 0.00 0.00 33.24 3.91
862 888 3.261951 CGCTACCCAACCGATGCG 61.262 66.667 0.00 0.00 37.57 4.73
863 889 3.573491 GCTACCCAACCGATGCGC 61.573 66.667 0.00 0.00 0.00 6.09
935 961 0.939419 GGCAACTGCAAAGCAAAAGG 59.061 50.000 3.76 0.00 44.36 3.11
968 994 3.114616 CGTCACGGCCAGAAGCAG 61.115 66.667 2.24 0.00 46.50 4.24
989 1015 0.607217 TAGACGCACGAGACAAGGGA 60.607 55.000 0.00 0.00 0.00 4.20
1000 1026 4.410400 CAAGGGACGGGGCAGACC 62.410 72.222 0.00 0.00 39.11 3.85
1199 1230 1.203287 TGTCACTCTCTTGCATCCTCG 59.797 52.381 0.00 0.00 0.00 4.63
1202 1233 2.300152 TCACTCTCTTGCATCCTCGTTT 59.700 45.455 0.00 0.00 0.00 3.60
1203 1234 2.670414 CACTCTCTTGCATCCTCGTTTC 59.330 50.000 0.00 0.00 0.00 2.78
1204 1235 2.300152 ACTCTCTTGCATCCTCGTTTCA 59.700 45.455 0.00 0.00 0.00 2.69
1205 1236 3.244215 ACTCTCTTGCATCCTCGTTTCAA 60.244 43.478 0.00 0.00 0.00 2.69
1206 1237 3.738982 TCTCTTGCATCCTCGTTTCAAA 58.261 40.909 0.00 0.00 0.00 2.69
1207 1238 4.133820 TCTCTTGCATCCTCGTTTCAAAA 58.866 39.130 0.00 0.00 0.00 2.44
1208 1239 4.578516 TCTCTTGCATCCTCGTTTCAAAAA 59.421 37.500 0.00 0.00 0.00 1.94
1234 1265 5.893897 AAAAACTCTCTTGCATCCTCATC 57.106 39.130 0.00 0.00 0.00 2.92
1247 1278 1.007118 TCCTCATCCTGTGCCAGTCTA 59.993 52.381 2.18 0.00 0.00 2.59
1248 1279 1.411977 CCTCATCCTGTGCCAGTCTAG 59.588 57.143 2.18 0.00 0.00 2.43
1249 1280 2.106566 CTCATCCTGTGCCAGTCTAGT 58.893 52.381 0.00 0.00 0.00 2.57
1250 1281 2.100584 CTCATCCTGTGCCAGTCTAGTC 59.899 54.545 0.00 0.00 0.00 2.59
1251 1282 2.106566 CATCCTGTGCCAGTCTAGTCT 58.893 52.381 0.00 0.00 0.00 3.24
1335 1366 3.585990 CATCGGTTCCATGCGCCC 61.586 66.667 4.18 0.00 0.00 6.13
1396 1427 0.517316 GTAGCCTTGGCAAGTTCGTG 59.483 55.000 24.57 10.84 0.00 4.35
1417 1448 0.590195 ACCGCGACATAGGATACGTC 59.410 55.000 8.23 0.00 46.39 4.34
1460 1491 2.224670 TGGGCACTCGAGGTAATTTTGT 60.225 45.455 18.41 0.00 0.00 2.83
1469 1500 6.004408 TCGAGGTAATTTTGTTTTGGCTAC 57.996 37.500 0.00 0.00 0.00 3.58
1501 1532 1.779569 AGTCGCGTGGTTTTACTGAG 58.220 50.000 5.77 0.00 0.00 3.35
1643 1674 4.846779 TTGCAGAAACCAAGGTACATTC 57.153 40.909 0.00 0.00 0.00 2.67
1693 1724 0.376152 CTGGATGTTCATCGCTGCAC 59.624 55.000 0.00 0.00 0.00 4.57
1761 1793 2.662006 TCTTGCTCTGATGAACCGAG 57.338 50.000 0.00 0.00 33.88 4.63
1964 1996 4.832248 TGATACTCAATGCTTTCGAAGGT 58.168 39.130 9.20 0.00 0.00 3.50
2002 2034 5.278463 GCAACTAACTGTCAATGAACCACAT 60.278 40.000 0.00 0.00 41.45 3.21
2082 2114 4.584029 AATCGCAGACAAACAACTATCG 57.416 40.909 0.00 0.00 42.51 2.92
2084 2116 2.066262 CGCAGACAAACAACTATCGGT 58.934 47.619 0.00 0.00 0.00 4.69
2117 2150 3.411446 CCCTGTGCTGAAAATGAGTACA 58.589 45.455 0.00 0.00 35.17 2.90
2119 2152 4.083110 CCCTGTGCTGAAAATGAGTACAAG 60.083 45.833 0.00 0.00 35.89 3.16
2125 2158 5.633601 TGCTGAAAATGAGTACAAGTACGAG 59.366 40.000 4.85 0.00 40.80 4.18
2126 2159 5.444745 GCTGAAAATGAGTACAAGTACGAGC 60.445 44.000 4.85 0.00 40.80 5.03
2131 2164 4.156664 TGAGTACAAGTACGAGCTGAAC 57.843 45.455 0.00 0.00 40.80 3.18
2137 2172 1.171308 AGTACGAGCTGAACCGCTTA 58.829 50.000 0.00 0.00 41.08 3.09
2142 2177 3.123804 ACGAGCTGAACCGCTTATTATG 58.876 45.455 0.00 0.00 41.08 1.90
2211 2247 4.462834 TGTTCTTGTGTACTCGGATGAGAT 59.537 41.667 0.00 0.00 45.57 2.75
2222 2258 1.869754 CGGATGAGATTGTGGCCTACG 60.870 57.143 3.32 0.00 0.00 3.51
2228 2264 1.745087 AGATTGTGGCCTACGCATTTG 59.255 47.619 3.32 0.00 39.75 2.32
2382 2418 7.164990 GCAAGTTTTCTTCTCTTTTTCTTCTCG 59.835 37.037 0.00 0.00 38.17 4.04
2414 2450 9.390795 CTCAATGTTTGACTGAAGATAACTTTG 57.609 33.333 0.00 0.00 36.24 2.77
2415 2451 9.119418 TCAATGTTTGACTGAAGATAACTTTGA 57.881 29.630 0.00 0.00 38.96 2.69
2492 2529 4.067896 TCAAGCTGAAGAACAAGGATGAC 58.932 43.478 0.00 0.00 0.00 3.06
2497 2534 5.048224 AGCTGAAGAACAAGGATGACAAATG 60.048 40.000 0.00 0.00 0.00 2.32
2501 2538 3.057033 AGAACAAGGATGACAAATGCAGC 60.057 43.478 0.00 0.00 0.00 5.25
2506 2543 0.804364 GATGACAAATGCAGCACGGA 59.196 50.000 0.00 0.00 0.00 4.69
2577 2614 0.660300 GCAGCAACCTGTTGTAACGC 60.660 55.000 11.35 5.83 42.31 4.84
2580 2617 0.378962 GCAACCTGTTGTAACGCACA 59.621 50.000 11.35 0.00 42.31 4.57
2624 2661 2.438763 AGCAATGGAGAATCTAGCAGCT 59.561 45.455 0.00 0.00 33.73 4.24
2682 2719 1.372997 CACGTGGAAGGAGTCGTGG 60.373 63.158 7.95 0.00 46.12 4.94
2694 2731 1.141019 GTCGTGGCGCCAAGAGATA 59.859 57.895 39.68 20.24 35.32 1.98
2801 2838 2.481276 CCGCGTTGAGAATGGACAGATA 60.481 50.000 4.92 0.00 0.00 1.98
2954 2999 5.607477 TGTCACCCTGTTCTGTTTAGTTAG 58.393 41.667 0.00 0.00 0.00 2.34
2955 3000 5.129815 TGTCACCCTGTTCTGTTTAGTTAGT 59.870 40.000 0.00 0.00 0.00 2.24
2956 3001 6.324512 TGTCACCCTGTTCTGTTTAGTTAGTA 59.675 38.462 0.00 0.00 0.00 1.82
2957 3002 6.644181 GTCACCCTGTTCTGTTTAGTTAGTAC 59.356 42.308 0.00 0.00 0.00 2.73
2958 3003 6.552350 TCACCCTGTTCTGTTTAGTTAGTACT 59.448 38.462 0.00 0.00 38.44 2.73
2959 3004 6.867293 CACCCTGTTCTGTTTAGTTAGTACTC 59.133 42.308 0.00 0.00 35.78 2.59
2960 3005 6.781507 ACCCTGTTCTGTTTAGTTAGTACTCT 59.218 38.462 0.00 0.00 35.78 3.24
2961 3006 7.039853 ACCCTGTTCTGTTTAGTTAGTACTCTC 60.040 40.741 0.00 0.00 35.78 3.20
2962 3007 7.177041 CCCTGTTCTGTTTAGTTAGTACTCTCT 59.823 40.741 0.00 1.60 35.78 3.10
2963 3008 8.578151 CCTGTTCTGTTTAGTTAGTACTCTCTT 58.422 37.037 0.00 0.00 35.78 2.85
2964 3009 9.615295 CTGTTCTGTTTAGTTAGTACTCTCTTC 57.385 37.037 0.00 0.00 35.78 2.87
2965 3010 8.288208 TGTTCTGTTTAGTTAGTACTCTCTTCG 58.712 37.037 0.00 0.00 35.78 3.79
2966 3011 7.976135 TCTGTTTAGTTAGTACTCTCTTCGT 57.024 36.000 0.00 0.00 35.78 3.85
2967 3012 9.494271 TTCTGTTTAGTTAGTACTCTCTTCGTA 57.506 33.333 0.00 0.00 35.78 3.43
2968 3013 9.494271 TCTGTTTAGTTAGTACTCTCTTCGTAA 57.506 33.333 0.00 0.00 35.78 3.18
3013 3058 4.281898 ACTATTTAGTGACCCAAACGCT 57.718 40.909 0.00 0.00 34.72 5.07
3014 3059 4.648651 ACTATTTAGTGACCCAAACGCTT 58.351 39.130 0.00 0.00 34.72 4.68
3015 3060 5.067954 ACTATTTAGTGACCCAAACGCTTT 58.932 37.500 0.00 0.00 34.72 3.51
3016 3061 4.929819 ATTTAGTGACCCAAACGCTTTT 57.070 36.364 0.00 0.00 0.00 2.27
3017 3062 6.711645 ACTATTTAGTGACCCAAACGCTTTTA 59.288 34.615 0.00 0.00 34.72 1.52
3018 3063 6.584185 ATTTAGTGACCCAAACGCTTTTAT 57.416 33.333 0.00 0.00 0.00 1.40
3019 3064 7.690952 ATTTAGTGACCCAAACGCTTTTATA 57.309 32.000 0.00 0.00 0.00 0.98
3020 3065 7.690952 TTTAGTGACCCAAACGCTTTTATAT 57.309 32.000 0.00 0.00 0.00 0.86
3021 3066 7.690952 TTAGTGACCCAAACGCTTTTATATT 57.309 32.000 0.00 0.00 0.00 1.28
3022 3067 6.584185 AGTGACCCAAACGCTTTTATATTT 57.416 33.333 0.00 0.00 0.00 1.40
3023 3068 6.617879 AGTGACCCAAACGCTTTTATATTTC 58.382 36.000 0.00 0.00 0.00 2.17
3024 3069 6.433093 AGTGACCCAAACGCTTTTATATTTCT 59.567 34.615 0.00 0.00 0.00 2.52
3025 3070 7.039993 AGTGACCCAAACGCTTTTATATTTCTT 60.040 33.333 0.00 0.00 0.00 2.52
3026 3071 7.597369 GTGACCCAAACGCTTTTATATTTCTTT 59.403 33.333 0.00 0.00 0.00 2.52
3027 3072 8.794553 TGACCCAAACGCTTTTATATTTCTTTA 58.205 29.630 0.00 0.00 0.00 1.85
3028 3073 8.975410 ACCCAAACGCTTTTATATTTCTTTAC 57.025 30.769 0.00 0.00 0.00 2.01
3029 3074 8.578151 ACCCAAACGCTTTTATATTTCTTTACA 58.422 29.630 0.00 0.00 0.00 2.41
3030 3075 9.072294 CCCAAACGCTTTTATATTTCTTTACAG 57.928 33.333 0.00 0.00 0.00 2.74
3031 3076 9.834628 CCAAACGCTTTTATATTTCTTTACAGA 57.165 29.630 0.00 0.00 0.00 3.41
3034 3079 8.209917 ACGCTTTTATATTTCTTTACAGAGGG 57.790 34.615 0.00 0.00 0.00 4.30
3035 3080 8.044908 ACGCTTTTATATTTCTTTACAGAGGGA 58.955 33.333 0.00 0.00 0.00 4.20
3045 3090 6.742559 TCTTTACAGAGGGAGTACTTGTTT 57.257 37.500 0.00 0.00 0.00 2.83
3095 4521 8.445275 AATGACAGCGGACATAATGTAAATTA 57.555 30.769 2.07 0.00 0.00 1.40
3126 4552 0.825410 TTTCGTATCGCTAAGCCCCA 59.175 50.000 0.00 0.00 0.00 4.96
3201 4838 9.981114 CATATAGTACCAAATACATGTCTGTCA 57.019 33.333 0.00 0.00 36.79 3.58
3204 4841 9.905713 ATAGTACCAAATACATGTCTGTCAAAT 57.094 29.630 0.00 0.00 36.79 2.32
3206 4843 9.905713 AGTACCAAATACATGTCTGTCAAATAT 57.094 29.630 0.00 0.00 36.79 1.28
3231 4868 4.857509 ACTCTAATATCCCTTCGCAGTC 57.142 45.455 0.00 0.00 0.00 3.51
3233 4870 4.038162 ACTCTAATATCCCTTCGCAGTCAC 59.962 45.833 0.00 0.00 0.00 3.67
3234 4871 3.958147 TCTAATATCCCTTCGCAGTCACA 59.042 43.478 0.00 0.00 0.00 3.58
3235 4872 3.627395 AATATCCCTTCGCAGTCACAA 57.373 42.857 0.00 0.00 0.00 3.33
3237 4874 4.955811 ATATCCCTTCGCAGTCACAATA 57.044 40.909 0.00 0.00 0.00 1.90
3238 4875 2.672961 TCCCTTCGCAGTCACAATAG 57.327 50.000 0.00 0.00 0.00 1.73
3239 4876 1.899814 TCCCTTCGCAGTCACAATAGT 59.100 47.619 0.00 0.00 0.00 2.12
3240 4877 3.093814 TCCCTTCGCAGTCACAATAGTA 58.906 45.455 0.00 0.00 0.00 1.82
3241 4878 3.130516 TCCCTTCGCAGTCACAATAGTAG 59.869 47.826 0.00 0.00 0.00 2.57
3242 4879 2.860735 CCTTCGCAGTCACAATAGTAGC 59.139 50.000 0.00 0.00 0.00 3.58
3243 4880 3.511699 CTTCGCAGTCACAATAGTAGCA 58.488 45.455 0.00 0.00 0.00 3.49
3244 4881 3.586100 TCGCAGTCACAATAGTAGCAA 57.414 42.857 0.00 0.00 0.00 3.91
3245 4882 4.123497 TCGCAGTCACAATAGTAGCAAT 57.877 40.909 0.00 0.00 0.00 3.56
3246 4883 3.865164 TCGCAGTCACAATAGTAGCAATG 59.135 43.478 0.00 0.00 0.00 2.82
3247 4884 3.544834 CGCAGTCACAATAGTAGCAATGC 60.545 47.826 0.00 0.00 0.00 3.56
3248 4885 3.374988 GCAGTCACAATAGTAGCAATGCA 59.625 43.478 8.35 0.00 0.00 3.96
3249 4886 4.495349 GCAGTCACAATAGTAGCAATGCAG 60.495 45.833 8.35 0.00 0.00 4.41
3250 4887 4.872124 CAGTCACAATAGTAGCAATGCAGA 59.128 41.667 8.35 0.00 0.00 4.26
3251 4888 5.526479 CAGTCACAATAGTAGCAATGCAGAT 59.474 40.000 8.35 0.00 0.00 2.90
3252 4889 6.703165 CAGTCACAATAGTAGCAATGCAGATA 59.297 38.462 8.35 0.00 0.00 1.98
3254 6061 7.935755 AGTCACAATAGTAGCAATGCAGATAAT 59.064 33.333 8.35 0.00 0.00 1.28
3256 6063 7.933033 TCACAATAGTAGCAATGCAGATAATGA 59.067 33.333 8.35 0.00 0.00 2.57
3263 6070 3.561310 GCAATGCAGATAATGAGACCGAA 59.439 43.478 0.00 0.00 0.00 4.30
3266 6073 4.736126 TGCAGATAATGAGACCGAAGAA 57.264 40.909 0.00 0.00 0.00 2.52
3271 6078 5.461737 CAGATAATGAGACCGAAGAAGAAGC 59.538 44.000 0.00 0.00 0.00 3.86
3272 6079 2.682155 ATGAGACCGAAGAAGAAGCC 57.318 50.000 0.00 0.00 0.00 4.35
3275 6082 0.966920 AGACCGAAGAAGAAGCCGAA 59.033 50.000 0.00 0.00 0.00 4.30
3290 6097 3.131326 CGAAGGTTGTATGCCGACA 57.869 52.632 0.00 0.00 0.00 4.35
3293 6100 2.738643 CGAAGGTTGTATGCCGACAGAT 60.739 50.000 0.00 0.00 0.00 2.90
3294 6101 3.270877 GAAGGTTGTATGCCGACAGATT 58.729 45.455 0.00 0.00 0.00 2.40
3295 6102 2.632377 AGGTTGTATGCCGACAGATTG 58.368 47.619 0.00 0.00 0.00 2.67
3297 6104 2.351726 GGTTGTATGCCGACAGATTGAC 59.648 50.000 0.00 0.00 0.00 3.18
3298 6105 3.000041 GTTGTATGCCGACAGATTGACA 59.000 45.455 0.00 0.00 0.00 3.58
3299 6106 3.541996 TGTATGCCGACAGATTGACAT 57.458 42.857 0.00 0.00 0.00 3.06
3300 6107 3.457234 TGTATGCCGACAGATTGACATC 58.543 45.455 0.00 0.00 0.00 3.06
3301 6108 1.575244 ATGCCGACAGATTGACATCG 58.425 50.000 0.00 0.00 34.17 3.84
3302 6109 0.246360 TGCCGACAGATTGACATCGT 59.754 50.000 0.00 0.00 34.17 3.73
3304 6111 1.560923 CCGACAGATTGACATCGTCC 58.439 55.000 0.00 0.00 33.20 4.79
3305 6112 1.560923 CGACAGATTGACATCGTCCC 58.439 55.000 0.00 0.00 33.20 4.46
3306 6113 1.560923 GACAGATTGACATCGTCCCG 58.439 55.000 0.00 0.00 34.17 5.14
3308 6115 0.460109 CAGATTGACATCGTCCCGCA 60.460 55.000 0.00 0.00 34.17 5.69
3309 6116 0.179100 AGATTGACATCGTCCCGCAG 60.179 55.000 0.00 0.00 34.17 5.18
3311 6118 3.950794 TTGACATCGTCCCGCAGCC 62.951 63.158 0.00 0.00 0.00 4.85
3321 6128 4.335647 CCGCAGCCAGGGTGAAGT 62.336 66.667 23.51 0.00 32.22 3.01
3322 6129 2.662596 CGCAGCCAGGGTGAAGTA 59.337 61.111 23.51 0.00 32.22 2.24
3323 6130 1.003839 CGCAGCCAGGGTGAAGTAA 60.004 57.895 23.51 0.00 32.22 2.24
3325 6132 1.616159 GCAGCCAGGGTGAAGTAAAA 58.384 50.000 23.51 0.00 32.22 1.52
3326 6133 1.960689 GCAGCCAGGGTGAAGTAAAAA 59.039 47.619 23.51 0.00 32.22 1.94
3327 6134 2.288213 GCAGCCAGGGTGAAGTAAAAAC 60.288 50.000 23.51 0.00 32.22 2.43
3328 6135 2.296190 CAGCCAGGGTGAAGTAAAAACC 59.704 50.000 13.97 0.00 32.22 3.27
3329 6136 1.268625 GCCAGGGTGAAGTAAAAACCG 59.731 52.381 0.00 0.00 34.62 4.44
3331 6138 2.551032 CCAGGGTGAAGTAAAAACCGTC 59.449 50.000 0.00 0.00 34.62 4.79
3332 6139 3.207778 CAGGGTGAAGTAAAAACCGTCA 58.792 45.455 0.00 0.00 34.62 4.35
3334 6141 3.881089 AGGGTGAAGTAAAAACCGTCAAG 59.119 43.478 0.00 0.00 34.62 3.02
3335 6142 3.878699 GGGTGAAGTAAAAACCGTCAAGA 59.121 43.478 0.00 0.00 34.62 3.02
3336 6143 4.517832 GGGTGAAGTAAAAACCGTCAAGAT 59.482 41.667 0.00 0.00 34.62 2.40
3337 6144 5.009310 GGGTGAAGTAAAAACCGTCAAGATT 59.991 40.000 0.00 0.00 34.62 2.40
3338 6145 5.912955 GGTGAAGTAAAAACCGTCAAGATTG 59.087 40.000 0.00 0.00 0.00 2.67
3339 6146 6.459161 GGTGAAGTAAAAACCGTCAAGATTGT 60.459 38.462 0.00 0.00 0.00 2.71
3340 6147 6.970613 GTGAAGTAAAAACCGTCAAGATTGTT 59.029 34.615 0.00 0.00 0.00 2.83
3341 6148 7.165318 GTGAAGTAAAAACCGTCAAGATTGTTC 59.835 37.037 0.00 0.00 0.00 3.18
3342 6149 6.687081 AGTAAAAACCGTCAAGATTGTTCA 57.313 33.333 0.00 0.00 0.00 3.18
3344 6151 7.193595 AGTAAAAACCGTCAAGATTGTTCAAG 58.806 34.615 0.00 0.00 0.00 3.02
3345 6152 3.626028 AACCGTCAAGATTGTTCAAGC 57.374 42.857 0.00 0.00 0.00 4.01
3347 6154 2.948979 ACCGTCAAGATTGTTCAAGCAA 59.051 40.909 3.74 0.00 0.00 3.91
3349 6156 3.558505 CGTCAAGATTGTTCAAGCAAGG 58.441 45.455 3.74 0.00 0.00 3.61
3350 6157 3.311966 GTCAAGATTGTTCAAGCAAGGC 58.688 45.455 3.74 0.00 0.00 4.35
3352 6159 0.883833 AGATTGTTCAAGCAAGGCGG 59.116 50.000 3.74 0.00 0.00 6.13
3354 6161 1.810151 GATTGTTCAAGCAAGGCGGTA 59.190 47.619 0.00 0.00 0.00 4.02
3355 6162 1.681538 TTGTTCAAGCAAGGCGGTAA 58.318 45.000 0.00 0.00 0.00 2.85
3356 6163 1.681538 TGTTCAAGCAAGGCGGTAAA 58.318 45.000 0.00 0.00 0.00 2.01
3357 6164 1.335496 TGTTCAAGCAAGGCGGTAAAC 59.665 47.619 0.00 0.00 0.00 2.01
3358 6165 0.955905 TTCAAGCAAGGCGGTAAACC 59.044 50.000 0.00 0.00 0.00 3.27
3359 6166 0.109723 TCAAGCAAGGCGGTAAACCT 59.890 50.000 0.00 0.00 40.02 3.50
3360 6167 0.521735 CAAGCAAGGCGGTAAACCTC 59.478 55.000 0.00 0.00 36.14 3.85
3361 6168 0.400594 AAGCAAGGCGGTAAACCTCT 59.599 50.000 0.00 0.00 36.14 3.69
3363 6170 0.803117 GCAAGGCGGTAAACCTCTTC 59.197 55.000 0.00 0.00 36.14 2.87
3364 6171 1.076332 CAAGGCGGTAAACCTCTTCG 58.924 55.000 0.00 0.00 36.14 3.79
3365 6172 0.672711 AAGGCGGTAAACCTCTTCGC 60.673 55.000 0.00 0.00 44.80 4.70
3366 6173 3.482809 GCGGTAAACCTCTTCGCC 58.517 61.111 0.00 0.00 40.44 5.54
3367 6174 1.375013 GCGGTAAACCTCTTCGCCA 60.375 57.895 0.00 0.00 40.44 5.69
3369 6176 1.359459 CGGTAAACCTCTTCGCCAGC 61.359 60.000 0.00 0.00 0.00 4.85
3370 6177 1.359459 GGTAAACCTCTTCGCCAGCG 61.359 60.000 5.50 5.50 41.35 5.18
3373 6180 2.788191 AAACCTCTTCGCCAGCGGAG 62.788 60.000 14.25 14.25 45.78 4.63
3374 6181 3.764466 CCTCTTCGCCAGCGGAGT 61.764 66.667 19.24 0.00 44.78 3.85
3377 6184 0.596083 CTCTTCGCCAGCGGAGTATG 60.596 60.000 19.24 8.01 44.78 2.39
3378 6185 1.035385 TCTTCGCCAGCGGAGTATGA 61.035 55.000 19.24 0.00 44.78 2.15
3379 6186 0.596083 CTTCGCCAGCGGAGTATGAG 60.596 60.000 12.25 0.00 39.99 2.90
3382 6189 1.593750 GCCAGCGGAGTATGAGCAG 60.594 63.158 0.00 0.00 0.00 4.24
3384 6191 1.680522 CCAGCGGAGTATGAGCAGGT 61.681 60.000 0.00 0.00 33.61 4.00
3385 6192 0.529337 CAGCGGAGTATGAGCAGGTG 60.529 60.000 0.00 0.00 0.00 4.00
3386 6193 1.227380 GCGGAGTATGAGCAGGTGG 60.227 63.158 0.00 0.00 0.00 4.61
3387 6194 1.227380 CGGAGTATGAGCAGGTGGC 60.227 63.158 0.00 0.00 45.30 5.01
3396 6203 4.451150 GCAGGTGGCACGGATCGA 62.451 66.667 12.17 0.00 43.97 3.59
3397 6204 2.509336 CAGGTGGCACGGATCGAC 60.509 66.667 12.17 0.00 0.00 4.20
3398 6205 2.680352 AGGTGGCACGGATCGACT 60.680 61.111 12.17 0.00 0.00 4.18
3400 6207 0.968901 AGGTGGCACGGATCGACTAA 60.969 55.000 12.17 0.00 0.00 2.24
3401 6208 0.108520 GGTGGCACGGATCGACTAAA 60.109 55.000 12.17 0.00 0.00 1.85
3402 6209 1.673626 GGTGGCACGGATCGACTAAAA 60.674 52.381 12.17 0.00 0.00 1.52
3403 6210 2.277084 GTGGCACGGATCGACTAAAAT 58.723 47.619 0.00 0.00 0.00 1.82
3404 6211 2.030457 GTGGCACGGATCGACTAAAATG 59.970 50.000 0.00 0.00 0.00 2.32
3405 6212 1.597663 GGCACGGATCGACTAAAATGG 59.402 52.381 0.00 0.00 0.00 3.16
3407 6214 3.131396 GCACGGATCGACTAAAATGGAT 58.869 45.455 0.00 0.00 0.00 3.41
3408 6215 3.059597 GCACGGATCGACTAAAATGGATG 60.060 47.826 0.00 0.00 0.00 3.51
3409 6216 3.494626 CACGGATCGACTAAAATGGATGG 59.505 47.826 0.00 0.00 0.00 3.51
3410 6217 3.386726 ACGGATCGACTAAAATGGATGGA 59.613 43.478 0.00 0.00 0.00 3.41
3411 6218 3.741344 CGGATCGACTAAAATGGATGGAC 59.259 47.826 0.00 0.00 0.00 4.02
3412 6219 4.065789 GGATCGACTAAAATGGATGGACC 58.934 47.826 0.00 0.00 39.54 4.46
3416 6223 2.864343 GACTAAAATGGATGGACCGACG 59.136 50.000 0.00 0.00 42.61 5.12
3417 6224 2.235402 ACTAAAATGGATGGACCGACGT 59.765 45.455 0.00 0.00 42.61 4.34
3418 6225 1.448985 AAAATGGATGGACCGACGTG 58.551 50.000 0.00 0.00 42.61 4.49
3420 6227 1.261938 AATGGATGGACCGACGTGGA 61.262 55.000 10.46 0.00 42.00 4.02
3421 6228 1.956629 ATGGATGGACCGACGTGGAC 61.957 60.000 10.46 4.84 42.00 4.02
3431 6442 1.403249 CCGACGTGGACCGACTAAAAT 60.403 52.381 0.00 0.00 42.00 1.82
3438 6611 4.202080 CGTGGACCGACTAAAATGGATAGA 60.202 45.833 0.00 0.00 39.56 1.98
3460 6633 7.190920 AGATAAGACACGGTTTTGAAAAGAG 57.809 36.000 0.00 0.00 0.00 2.85
3464 6637 4.097892 AGACACGGTTTTGAAAAGAGCAAT 59.902 37.500 0.00 0.00 0.00 3.56
3561 7574 3.446442 AATTGAGCAGAGAATGTGGGT 57.554 42.857 0.00 0.00 0.00 4.51
3584 7597 1.247567 CGCAACCTCCAAACCTCATT 58.752 50.000 0.00 0.00 0.00 2.57
3601 7614 6.648879 CCTCATTGGTTTGGTTAAGAAGAA 57.351 37.500 0.00 0.00 0.00 2.52
3678 7703 3.587797 TGTAGACGGTTTTCAGCCTAG 57.412 47.619 0.00 0.00 0.00 3.02
3696 7721 5.045869 AGCCTAGTAAGAGCATTTACAACCA 60.046 40.000 11.44 0.00 36.27 3.67
3700 7725 5.246307 AGTAAGAGCATTTACAACCAGACC 58.754 41.667 11.44 0.00 36.27 3.85
3701 7726 4.373156 AAGAGCATTTACAACCAGACCT 57.627 40.909 0.00 0.00 0.00 3.85
3708 7733 8.492415 AGCATTTACAACCAGACCTCTATATA 57.508 34.615 0.00 0.00 0.00 0.86
3717 7759 3.946558 CAGACCTCTATATACGGGCTACC 59.053 52.174 2.12 0.00 32.62 3.18
3719 7761 3.946558 GACCTCTATATACGGGCTACCTG 59.053 52.174 0.00 0.00 35.68 4.00
3721 7763 3.053842 CCTCTATATACGGGCTACCTGGA 60.054 52.174 0.00 0.00 33.40 3.86
3730 7772 1.192146 GGCTACCTGGACACTGACCA 61.192 60.000 0.00 0.13 35.96 4.02
3759 7801 0.251341 ACAACACCCAATCAGGCTCC 60.251 55.000 0.00 0.00 35.39 4.70
3763 7805 2.276740 CCCAATCAGGCTCCCCAC 59.723 66.667 0.00 0.00 35.39 4.61
3772 7814 4.717313 GCTCCCCACAACCGGGTC 62.717 72.222 6.32 0.00 45.80 4.46
3773 7815 3.246112 CTCCCCACAACCGGGTCA 61.246 66.667 6.32 0.00 45.80 4.02
3778 7820 1.730451 CCCACAACCGGGTCAAACAC 61.730 60.000 6.32 0.00 41.83 3.32
3780 7822 0.750182 CACAACCGGGTCAAACACCT 60.750 55.000 6.32 0.00 45.95 4.00
3803 7846 0.034059 CTGACGGCACTCCCCATATC 59.966 60.000 0.00 0.00 0.00 1.63
3807 7850 1.410850 CGGCACTCCCCATATCCAGT 61.411 60.000 0.00 0.00 0.00 4.00
3816 7859 5.435041 ACTCCCCATATCCAGTCCAAATTTA 59.565 40.000 0.00 0.00 0.00 1.40
3820 7863 5.400189 CCCATATCCAGTCCAAATTTAGGGT 60.400 44.000 0.00 0.00 0.00 4.34
3822 7865 4.946160 ATCCAGTCCAAATTTAGGGTGA 57.054 40.909 0.00 0.00 0.00 4.02
3827 7870 7.418378 TCCAGTCCAAATTTAGGGTGAATATT 58.582 34.615 0.00 0.00 0.00 1.28
3833 7876 5.767816 AATTTAGGGTGAATATTGGACGC 57.232 39.130 0.00 0.00 0.00 5.19
3863 7907 3.741029 CGTCACTCGGAATGACCAT 57.259 52.632 13.35 0.00 42.97 3.55
3871 7915 0.537371 CGGAATGACCATTAGGGCCC 60.537 60.000 16.46 16.46 45.14 5.80
3872 7916 0.555769 GGAATGACCATTAGGGCCCA 59.444 55.000 27.56 3.72 45.14 5.36
3873 7917 1.147817 GGAATGACCATTAGGGCCCAT 59.852 52.381 27.56 12.06 45.14 4.00
3874 7918 2.242043 GAATGACCATTAGGGCCCATG 58.758 52.381 27.56 19.85 45.14 3.66
3875 7919 1.234806 ATGACCATTAGGGCCCATGT 58.765 50.000 27.56 13.12 45.14 3.21
3876 7920 0.550914 TGACCATTAGGGCCCATGTC 59.449 55.000 27.56 21.14 45.14 3.06
3884 7937 1.823899 GGGCCCATGTCAATCCGTC 60.824 63.158 19.95 0.00 0.00 4.79
3899 7952 2.269241 GTCCCTCTTCCTTGCCCG 59.731 66.667 0.00 0.00 0.00 6.13
3904 7957 3.551496 CTCTTCCTTGCCCGCCACA 62.551 63.158 0.00 0.00 0.00 4.17
3906 7959 1.978617 CTTCCTTGCCCGCCACATT 60.979 57.895 0.00 0.00 0.00 2.71
3907 7960 0.679640 CTTCCTTGCCCGCCACATTA 60.680 55.000 0.00 0.00 0.00 1.90
3928 7981 1.064017 TGGAATGGTGGCTATGGGAAC 60.064 52.381 0.00 0.00 0.00 3.62
3946 7999 3.214328 GAACCCGTATGCAGATGGATTT 58.786 45.455 21.30 12.93 0.00 2.17
3948 8001 3.631250 ACCCGTATGCAGATGGATTTTT 58.369 40.909 21.30 0.00 0.00 1.94
3973 8026 9.482627 TTGTCTGCGGTAAAAATTATTCAAAAT 57.517 25.926 0.00 0.00 0.00 1.82
3991 8044 5.066634 TCAAAATAGAACAAACGGCAAGTGA 59.933 36.000 0.00 0.00 0.00 3.41
4032 8085 5.841957 ACAAAATAGGGTCATCAATGCTC 57.158 39.130 0.00 0.00 0.00 4.26
4033 8086 5.263599 ACAAAATAGGGTCATCAATGCTCA 58.736 37.500 0.00 0.00 0.00 4.26
4044 8097 5.049198 GTCATCAATGCTCACTTTGTGAAGA 60.049 40.000 2.00 0.00 42.26 2.87
4063 8116 7.039714 TGTGAAGAGTATGAACTGACACTATGT 60.040 37.037 0.00 0.00 35.56 2.29
4065 8118 9.190317 TGAAGAGTATGAACTGACACTATGTAT 57.810 33.333 0.00 0.00 35.56 2.29
4070 8123 9.415008 AGTATGAACTGACACTATGTATCTCTT 57.585 33.333 0.00 0.00 33.57 2.85
4079 8135 9.020731 TGACACTATGTATCTCTTTTAGTGACA 57.979 33.333 13.59 11.00 41.31 3.58
4094 8150 9.388506 CTTTTAGTGACAGTTCATATCCTTCAT 57.611 33.333 0.00 0.00 33.11 2.57
4100 8156 9.330063 GTGACAGTTCATATCCTTCATAAATGA 57.670 33.333 0.00 0.00 33.11 2.57
4169 8226 2.883574 TGACGTGGCTATTTAAGACGG 58.116 47.619 0.00 0.00 35.07 4.79
4172 8229 2.997986 ACGTGGCTATTTAAGACGGTTG 59.002 45.455 0.00 0.00 35.07 3.77
4181 8238 0.386352 TAAGACGGTTGTGTCGCTCG 60.386 55.000 0.00 0.00 43.70 5.03
4182 8239 2.050714 GACGGTTGTGTCGCTCGA 60.051 61.111 0.00 0.00 0.00 4.04
4183 8240 2.050351 ACGGTTGTGTCGCTCGAG 60.050 61.111 8.45 8.45 0.00 4.04
4184 8241 2.805353 CGGTTGTGTCGCTCGAGG 60.805 66.667 15.58 4.50 0.00 4.63
4185 8242 3.112709 GGTTGTGTCGCTCGAGGC 61.113 66.667 15.58 5.67 37.64 4.70
4194 8251 2.890371 GCTCGAGGCGGGACTAAA 59.110 61.111 15.58 0.00 0.00 1.85
4195 8252 1.518792 GCTCGAGGCGGGACTAAAC 60.519 63.158 15.58 0.00 0.00 2.01
4196 8253 1.141234 CTCGAGGCGGGACTAAACC 59.859 63.158 3.91 0.00 0.00 3.27
4197 8254 2.186125 CGAGGCGGGACTAAACCC 59.814 66.667 0.00 0.00 45.92 4.11
4198 8255 2.588439 GAGGCGGGACTAAACCCC 59.412 66.667 0.00 0.00 46.62 4.95
4199 8256 3.013327 AGGCGGGACTAAACCCCC 61.013 66.667 0.00 0.00 46.62 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.518949 GCAATGTACTTTCGTGCATGG 58.481 47.619 5.98 0.00 44.22 3.66
15 16 0.462375 ATGTCGTAGGGCGCAATGTA 59.538 50.000 10.83 0.00 41.07 2.29
156 157 8.031277 GGAAGCAAAACTTATCATCTTCATGTT 58.969 33.333 0.00 0.00 39.29 2.71
177 181 3.443099 ACAAGTTGAGCAAAAGGAAGC 57.557 42.857 10.54 0.00 0.00 3.86
228 232 5.151389 CGCGTGTGAGCTACATATAATGTA 58.849 41.667 0.00 0.24 44.38 2.29
319 323 1.471287 TCGTTCCACACATACTCTCCG 59.529 52.381 0.00 0.00 0.00 4.63
352 358 4.290155 CGGATGTCCAACAAGTTTTTCAG 58.710 43.478 0.00 0.00 35.14 3.02
399 406 5.863397 GCATGCAAATTAAGTCTAGCACAAA 59.137 36.000 14.21 0.00 34.54 2.83
404 411 6.963796 ACATAGCATGCAAATTAAGTCTAGC 58.036 36.000 21.98 0.00 0.00 3.42
504 515 8.516234 AGTCACATACATTTTAAACCGCATTTA 58.484 29.630 0.00 0.00 0.00 1.40
516 527 7.121168 CCATCCAACACTAGTCACATACATTTT 59.879 37.037 0.00 0.00 0.00 1.82
556 568 2.147150 TCAATTCAATTCGCGGACACA 58.853 42.857 6.13 0.00 0.00 3.72
566 578 3.119009 TCCCCTGGCATCAATTCAATT 57.881 42.857 0.00 0.00 0.00 2.32
573 585 2.302445 CACAAAAATCCCCTGGCATCAA 59.698 45.455 0.00 0.00 0.00 2.57
574 586 1.901159 CACAAAAATCCCCTGGCATCA 59.099 47.619 0.00 0.00 0.00 3.07
575 587 1.207811 CCACAAAAATCCCCTGGCATC 59.792 52.381 0.00 0.00 0.00 3.91
576 588 1.278537 CCACAAAAATCCCCTGGCAT 58.721 50.000 0.00 0.00 0.00 4.40
577 589 0.835543 CCCACAAAAATCCCCTGGCA 60.836 55.000 0.00 0.00 0.00 4.92
578 590 0.835971 ACCCACAAAAATCCCCTGGC 60.836 55.000 0.00 0.00 0.00 4.85
579 591 1.347378 CAACCCACAAAAATCCCCTGG 59.653 52.381 0.00 0.00 0.00 4.45
580 592 1.270785 GCAACCCACAAAAATCCCCTG 60.271 52.381 0.00 0.00 0.00 4.45
581 593 1.055849 GCAACCCACAAAAATCCCCT 58.944 50.000 0.00 0.00 0.00 4.79
582 594 0.036164 GGCAACCCACAAAAATCCCC 59.964 55.000 0.00 0.00 0.00 4.81
583 595 0.761802 TGGCAACCCACAAAAATCCC 59.238 50.000 0.00 0.00 35.79 3.85
593 605 0.253044 GCATCTCTAGTGGCAACCCA 59.747 55.000 0.00 0.00 39.32 4.51
594 606 0.543749 AGCATCTCTAGTGGCAACCC 59.456 55.000 0.00 0.00 0.00 4.11
595 607 3.118592 ACTTAGCATCTCTAGTGGCAACC 60.119 47.826 0.00 0.00 0.00 3.77
596 608 4.130286 ACTTAGCATCTCTAGTGGCAAC 57.870 45.455 0.00 0.00 0.00 4.17
597 609 4.507710 CAACTTAGCATCTCTAGTGGCAA 58.492 43.478 0.00 0.00 0.00 4.52
598 610 3.118629 CCAACTTAGCATCTCTAGTGGCA 60.119 47.826 0.00 0.00 0.00 4.92
599 611 3.118592 ACCAACTTAGCATCTCTAGTGGC 60.119 47.826 0.00 0.00 32.80 5.01
600 612 4.744795 ACCAACTTAGCATCTCTAGTGG 57.255 45.455 0.00 0.00 34.37 4.00
601 613 4.800993 CGAACCAACTTAGCATCTCTAGTG 59.199 45.833 0.00 0.00 0.00 2.74
602 614 4.142138 CCGAACCAACTTAGCATCTCTAGT 60.142 45.833 0.00 0.00 0.00 2.57
603 615 4.142138 ACCGAACCAACTTAGCATCTCTAG 60.142 45.833 0.00 0.00 0.00 2.43
604 616 3.767673 ACCGAACCAACTTAGCATCTCTA 59.232 43.478 0.00 0.00 0.00 2.43
605 617 2.567615 ACCGAACCAACTTAGCATCTCT 59.432 45.455 0.00 0.00 0.00 3.10
606 618 2.973945 ACCGAACCAACTTAGCATCTC 58.026 47.619 0.00 0.00 0.00 2.75
607 619 3.118738 CCTACCGAACCAACTTAGCATCT 60.119 47.826 0.00 0.00 0.00 2.90
608 620 3.195661 CCTACCGAACCAACTTAGCATC 58.804 50.000 0.00 0.00 0.00 3.91
609 621 2.093128 CCCTACCGAACCAACTTAGCAT 60.093 50.000 0.00 0.00 0.00 3.79
610 622 1.276989 CCCTACCGAACCAACTTAGCA 59.723 52.381 0.00 0.00 0.00 3.49
611 623 1.406477 CCCCTACCGAACCAACTTAGC 60.406 57.143 0.00 0.00 0.00 3.09
623 635 1.784358 TATCACACTTCCCCCTACCG 58.216 55.000 0.00 0.00 0.00 4.02
624 636 2.841881 TGTTATCACACTTCCCCCTACC 59.158 50.000 0.00 0.00 0.00 3.18
644 657 5.872617 TGTTTACGAAATAGTGTCTCCCATG 59.127 40.000 0.00 0.00 0.00 3.66
714 728 7.912250 GTGAGTGATACAAATCCAAGCATTTAG 59.088 37.037 0.00 0.00 0.00 1.85
728 743 9.327628 GTAGTACTCTATCAGTGAGTGATACAA 57.672 37.037 5.90 0.00 44.69 2.41
746 761 5.106634 ACACGAATCAGTGACTGTAGTACTC 60.107 44.000 12.93 1.27 44.43 2.59
772 795 3.021269 TGCTTTCTTGCAGCAAATGAG 57.979 42.857 9.65 7.95 44.42 2.90
782 805 2.047040 GTCTCGCTTTTGCTTTCTTGC 58.953 47.619 0.00 0.00 44.80 4.01
796 819 0.726827 TGCATTTGGATTCGTCTCGC 59.273 50.000 0.00 0.00 0.00 5.03
835 858 0.748450 TTGGGTAGCGACGGAATAGG 59.252 55.000 0.00 0.00 0.00 2.57
846 871 3.573491 GCGCATCGGTTGGGTAGC 61.573 66.667 0.30 0.00 40.30 3.58
935 961 1.606668 TGACGGTTTCTGCCAATGTTC 59.393 47.619 0.00 0.00 0.00 3.18
989 1015 2.039624 ATCTCTGGTCTGCCCCGT 59.960 61.111 0.00 0.00 0.00 5.28
1000 1026 2.093075 ACTGTTGCCATCTCCATCTCTG 60.093 50.000 0.00 0.00 0.00 3.35
1143 1174 1.230853 TACCTGGGGAGGGAGAGGA 60.231 63.158 0.00 0.00 0.00 3.71
1181 1212 1.550327 ACGAGGATGCAAGAGAGTGA 58.450 50.000 0.00 0.00 0.00 3.41
1212 1243 4.704057 GGATGAGGATGCAAGAGAGTTTTT 59.296 41.667 0.00 0.00 0.00 1.94
1213 1244 4.018597 AGGATGAGGATGCAAGAGAGTTTT 60.019 41.667 0.00 0.00 0.00 2.43
1214 1245 3.522750 AGGATGAGGATGCAAGAGAGTTT 59.477 43.478 0.00 0.00 0.00 2.66
1215 1246 3.113824 AGGATGAGGATGCAAGAGAGTT 58.886 45.455 0.00 0.00 0.00 3.01
1216 1247 2.435069 CAGGATGAGGATGCAAGAGAGT 59.565 50.000 0.00 0.00 39.69 3.24
1217 1248 2.435069 ACAGGATGAGGATGCAAGAGAG 59.565 50.000 0.00 0.00 39.69 3.20
1218 1249 2.169978 CACAGGATGAGGATGCAAGAGA 59.830 50.000 0.00 0.00 39.69 3.10
1219 1250 2.562635 CACAGGATGAGGATGCAAGAG 58.437 52.381 0.00 0.00 39.69 2.85
1220 1251 1.407851 GCACAGGATGAGGATGCAAGA 60.408 52.381 0.00 0.00 39.69 3.02
1221 1252 1.022735 GCACAGGATGAGGATGCAAG 58.977 55.000 0.00 0.00 39.69 4.01
1222 1253 0.394762 GGCACAGGATGAGGATGCAA 60.395 55.000 0.00 0.00 39.69 4.08
1223 1254 1.225426 GGCACAGGATGAGGATGCA 59.775 57.895 0.00 0.00 39.69 3.96
1224 1255 1.225426 TGGCACAGGATGAGGATGC 59.775 57.895 0.00 0.00 39.69 3.91
1247 1278 1.002868 GCCATGACACCAGCAGACT 60.003 57.895 0.00 0.00 0.00 3.24
1248 1279 2.042831 GGCCATGACACCAGCAGAC 61.043 63.158 0.00 0.00 0.00 3.51
1249 1280 2.352422 GGCCATGACACCAGCAGA 59.648 61.111 0.00 0.00 0.00 4.26
1250 1281 3.129502 CGGCCATGACACCAGCAG 61.130 66.667 2.24 0.00 0.00 4.24
1251 1282 3.899981 GACGGCCATGACACCAGCA 62.900 63.158 2.24 0.00 0.00 4.41
1396 1427 0.109873 CGTATCCTATGTCGCGGTCC 60.110 60.000 6.13 0.00 0.00 4.46
1417 1448 2.436646 ACGAGGCTGGGCAAATCG 60.437 61.111 0.51 8.60 36.88 3.34
1423 1454 1.227674 CCATAAGACGAGGCTGGGC 60.228 63.158 0.51 0.00 0.00 5.36
1460 1491 7.924412 CGACTAATAATCTACAGGTAGCCAAAA 59.076 37.037 1.54 0.00 33.32 2.44
1469 1500 4.227538 CCACGCGACTAATAATCTACAGG 58.772 47.826 15.93 0.00 0.00 4.00
1501 1532 0.540923 AAGATGCTCAGACCTGGCTC 59.459 55.000 0.00 0.00 0.00 4.70
1643 1674 2.763249 ACGTTTGCAAAGCAGAGAAG 57.237 45.000 13.26 0.00 40.61 2.85
1719 1750 4.632153 ACCGAGACCATTAGCAATCATAC 58.368 43.478 0.00 0.00 0.00 2.39
1761 1793 3.724494 GCTAACCAGGCGATCTGC 58.276 61.111 0.00 1.55 42.05 4.26
1958 1990 5.739752 TGCATGATTCAATTCTACCTTCG 57.260 39.130 0.00 0.00 0.00 3.79
1964 1996 8.565896 ACAGTTAGTTGCATGATTCAATTCTA 57.434 30.769 0.00 0.00 0.00 2.10
2002 2034 3.054875 AGCTCCATGACTGCATTCTGTAA 60.055 43.478 5.59 0.00 30.68 2.41
2117 2150 1.965219 AGCGGTTCAGCTCGTACTT 59.035 52.632 0.00 0.00 45.67 2.24
2125 2158 6.202954 ACATTACTCATAATAAGCGGTTCAGC 59.797 38.462 1.59 0.00 31.52 4.26
2126 2159 7.715265 ACATTACTCATAATAAGCGGTTCAG 57.285 36.000 1.59 0.00 29.44 3.02
2131 2164 7.385205 AGCAAGTACATTACTCATAATAAGCGG 59.615 37.037 0.00 0.00 38.26 5.52
2137 2172 8.184192 GCAACAAGCAAGTACATTACTCATAAT 58.816 33.333 0.00 0.00 44.79 1.28
2211 2247 0.538516 ACCAAATGCGTAGGCCACAA 60.539 50.000 5.01 0.00 38.85 3.33
2222 2258 3.004315 TCCTTCGAAAGAACACCAAATGC 59.996 43.478 0.00 0.00 46.92 3.56
2228 2264 3.741856 GTCTTCTCCTTCGAAAGAACACC 59.258 47.826 7.97 0.00 46.92 4.16
2284 2320 5.063180 TGCACTGAATCATTCCAATCAAC 57.937 39.130 0.00 0.00 0.00 3.18
2414 2450 9.856803 AACAACGTGCAATTTTTATTTGTTATC 57.143 25.926 0.00 0.00 34.90 1.75
2492 2529 0.108992 AATGCTCCGTGCTGCATTTG 60.109 50.000 5.27 0.00 43.53 2.32
2497 2534 1.354506 GATGAATGCTCCGTGCTGC 59.645 57.895 0.00 0.00 43.37 5.25
2501 2538 1.528586 GATTCCGATGAATGCTCCGTG 59.471 52.381 0.00 0.00 41.30 4.94
2506 2543 2.224475 CCCTCAGATTCCGATGAATGCT 60.224 50.000 0.00 0.00 41.30 3.79
2561 2598 0.378962 TGTGCGTTACAACAGGTTGC 59.621 50.000 11.84 0.00 44.03 4.17
2577 2614 2.657237 GGTGTCGGACCTCCTGTG 59.343 66.667 5.55 0.00 42.25 3.66
2580 2617 2.283966 CAGGGTGTCGGACCTCCT 60.284 66.667 11.93 11.93 45.33 3.69
2624 2661 1.970114 GCTGCAGCTGCTTCCTGAA 60.970 57.895 36.61 15.90 42.66 3.02
2694 2731 1.710816 GGGGAGAAGACGGAGATGAT 58.289 55.000 0.00 0.00 0.00 2.45
2744 2781 2.890371 GCGGCCGAGAAGAAGGTA 59.110 61.111 33.48 0.00 0.00 3.08
2801 2838 8.079211 TCATGACTAGCTAAGTGTTCCTAATT 57.921 34.615 0.00 0.00 39.07 1.40
2992 3037 4.281898 AGCGTTTGGGTCACTAAATAGT 57.718 40.909 0.00 0.00 36.90 2.12
2993 3038 5.622770 AAAGCGTTTGGGTCACTAAATAG 57.377 39.130 0.00 0.00 29.52 1.73
2994 3039 7.690952 ATAAAAGCGTTTGGGTCACTAAATA 57.309 32.000 7.95 0.00 29.52 1.40
2995 3040 4.929819 AAAAGCGTTTGGGTCACTAAAT 57.070 36.364 0.00 0.00 29.52 1.40
2996 3041 7.690952 ATATAAAAGCGTTTGGGTCACTAAA 57.309 32.000 7.95 0.00 0.00 1.85
2997 3042 7.690952 AATATAAAAGCGTTTGGGTCACTAA 57.309 32.000 7.95 0.00 0.00 2.24
2998 3043 7.608761 AGAAATATAAAAGCGTTTGGGTCACTA 59.391 33.333 7.95 0.00 0.00 2.74
2999 3044 6.433093 AGAAATATAAAAGCGTTTGGGTCACT 59.567 34.615 7.95 0.00 0.00 3.41
3000 3045 6.617879 AGAAATATAAAAGCGTTTGGGTCAC 58.382 36.000 7.95 0.00 0.00 3.67
3001 3046 6.827586 AGAAATATAAAAGCGTTTGGGTCA 57.172 33.333 7.95 0.00 0.00 4.02
3002 3047 9.069078 GTAAAGAAATATAAAAGCGTTTGGGTC 57.931 33.333 7.95 0.00 0.00 4.46
3003 3048 8.578151 TGTAAAGAAATATAAAAGCGTTTGGGT 58.422 29.630 7.95 0.00 0.00 4.51
3004 3049 8.973835 TGTAAAGAAATATAAAAGCGTTTGGG 57.026 30.769 7.95 0.00 0.00 4.12
3005 3050 9.834628 TCTGTAAAGAAATATAAAAGCGTTTGG 57.165 29.630 7.95 0.00 0.00 3.28
3008 3053 8.674607 CCCTCTGTAAAGAAATATAAAAGCGTT 58.325 33.333 0.00 0.00 0.00 4.84
3009 3054 8.044908 TCCCTCTGTAAAGAAATATAAAAGCGT 58.955 33.333 0.00 0.00 0.00 5.07
3010 3055 8.433421 TCCCTCTGTAAAGAAATATAAAAGCG 57.567 34.615 0.00 0.00 0.00 4.68
3011 3056 9.397280 ACTCCCTCTGTAAAGAAATATAAAAGC 57.603 33.333 0.00 0.00 0.00 3.51
3017 3062 9.047947 ACAAGTACTCCCTCTGTAAAGAAATAT 57.952 33.333 0.00 0.00 0.00 1.28
3018 3063 8.431910 ACAAGTACTCCCTCTGTAAAGAAATA 57.568 34.615 0.00 0.00 0.00 1.40
3019 3064 7.317722 ACAAGTACTCCCTCTGTAAAGAAAT 57.682 36.000 0.00 0.00 0.00 2.17
3020 3065 6.742559 ACAAGTACTCCCTCTGTAAAGAAA 57.257 37.500 0.00 0.00 0.00 2.52
3021 3066 6.742559 AACAAGTACTCCCTCTGTAAAGAA 57.257 37.500 0.00 0.00 0.00 2.52
3022 3067 6.742559 AAACAAGTACTCCCTCTGTAAAGA 57.257 37.500 0.00 0.00 0.00 2.52
3023 3068 6.585322 CGTAAACAAGTACTCCCTCTGTAAAG 59.415 42.308 0.00 0.00 0.00 1.85
3024 3069 6.265196 TCGTAAACAAGTACTCCCTCTGTAAA 59.735 38.462 0.00 0.00 0.00 2.01
3025 3070 5.769662 TCGTAAACAAGTACTCCCTCTGTAA 59.230 40.000 0.00 0.00 0.00 2.41
3026 3071 5.316167 TCGTAAACAAGTACTCCCTCTGTA 58.684 41.667 0.00 0.00 0.00 2.74
3027 3072 4.147321 TCGTAAACAAGTACTCCCTCTGT 58.853 43.478 0.00 0.00 0.00 3.41
3028 3073 4.778534 TCGTAAACAAGTACTCCCTCTG 57.221 45.455 0.00 0.00 0.00 3.35
3029 3074 5.537674 TCTTTCGTAAACAAGTACTCCCTCT 59.462 40.000 0.00 0.00 0.00 3.69
3030 3075 5.776744 TCTTTCGTAAACAAGTACTCCCTC 58.223 41.667 0.00 0.00 0.00 4.30
3031 3076 5.796424 TCTTTCGTAAACAAGTACTCCCT 57.204 39.130 0.00 0.00 0.00 4.20
3032 3077 8.538409 TTTATCTTTCGTAAACAAGTACTCCC 57.462 34.615 0.00 0.00 0.00 4.30
3045 3090 9.594478 TTATGAACTGCTGATTTATCTTTCGTA 57.406 29.630 0.00 0.00 0.00 3.43
3095 4521 3.061697 GCGATACGAAAAACGATTCCACT 59.938 43.478 0.00 0.00 45.77 4.00
3110 4536 0.670546 CCATGGGGCTTAGCGATACG 60.671 60.000 2.85 0.00 0.00 3.06
3115 4541 2.588877 CGTCCATGGGGCTTAGCG 60.589 66.667 13.02 2.08 0.00 4.26
3126 4552 9.244292 AGATGTACACATTATATACTCGTCCAT 57.756 33.333 0.00 0.00 36.57 3.41
3204 4841 9.696572 ACTGCGAAGGGATATTAGAGTATAATA 57.303 33.333 0.00 0.00 0.00 0.98
3205 4842 8.596781 ACTGCGAAGGGATATTAGAGTATAAT 57.403 34.615 0.00 0.00 0.00 1.28
3206 4843 7.668469 TGACTGCGAAGGGATATTAGAGTATAA 59.332 37.037 0.00 0.00 0.00 0.98
3207 4844 7.120873 GTGACTGCGAAGGGATATTAGAGTATA 59.879 40.741 0.00 0.00 0.00 1.47
3208 4845 6.010850 TGACTGCGAAGGGATATTAGAGTAT 58.989 40.000 0.00 0.00 0.00 2.12
3209 4846 5.241064 GTGACTGCGAAGGGATATTAGAGTA 59.759 44.000 0.00 0.00 0.00 2.59
3210 4847 4.038162 GTGACTGCGAAGGGATATTAGAGT 59.962 45.833 0.00 0.00 0.00 3.24
3211 4848 4.038042 TGTGACTGCGAAGGGATATTAGAG 59.962 45.833 0.00 0.00 0.00 2.43
3212 4849 3.958147 TGTGACTGCGAAGGGATATTAGA 59.042 43.478 0.00 0.00 0.00 2.10
3213 4850 4.322080 TGTGACTGCGAAGGGATATTAG 57.678 45.455 0.00 0.00 0.00 1.73
3214 4851 4.746535 TTGTGACTGCGAAGGGATATTA 57.253 40.909 0.00 0.00 0.00 0.98
3216 4853 3.845781 ATTGTGACTGCGAAGGGATAT 57.154 42.857 0.00 0.00 0.00 1.63
3217 4854 3.704566 ACTATTGTGACTGCGAAGGGATA 59.295 43.478 0.00 0.00 0.00 2.59
3218 4855 2.501723 ACTATTGTGACTGCGAAGGGAT 59.498 45.455 0.00 0.00 0.00 3.85
3219 4856 1.899814 ACTATTGTGACTGCGAAGGGA 59.100 47.619 0.00 0.00 0.00 4.20
3220 4857 2.386661 ACTATTGTGACTGCGAAGGG 57.613 50.000 0.00 0.00 0.00 3.95
3221 4858 2.860735 GCTACTATTGTGACTGCGAAGG 59.139 50.000 0.00 0.00 0.00 3.46
3222 4859 3.511699 TGCTACTATTGTGACTGCGAAG 58.488 45.455 0.00 0.00 0.00 3.79
3223 4860 3.586100 TGCTACTATTGTGACTGCGAA 57.414 42.857 0.00 0.00 0.00 4.70
3224 4861 3.586100 TTGCTACTATTGTGACTGCGA 57.414 42.857 0.00 0.00 0.00 5.10
3225 4862 3.544834 GCATTGCTACTATTGTGACTGCG 60.545 47.826 0.16 0.00 0.00 5.18
3226 4863 3.374988 TGCATTGCTACTATTGTGACTGC 59.625 43.478 10.49 0.00 0.00 4.40
3227 4864 4.872124 TCTGCATTGCTACTATTGTGACTG 59.128 41.667 10.49 0.00 0.00 3.51
3228 4865 5.089970 TCTGCATTGCTACTATTGTGACT 57.910 39.130 10.49 0.00 0.00 3.41
3231 4868 8.091385 TCATTATCTGCATTGCTACTATTGTG 57.909 34.615 10.49 0.55 0.00 3.33
3233 4870 8.441608 GTCTCATTATCTGCATTGCTACTATTG 58.558 37.037 10.49 5.63 0.00 1.90
3234 4871 7.605691 GGTCTCATTATCTGCATTGCTACTATT 59.394 37.037 10.49 0.00 0.00 1.73
3235 4872 7.102346 GGTCTCATTATCTGCATTGCTACTAT 58.898 38.462 10.49 1.16 0.00 2.12
3237 4874 5.303971 GGTCTCATTATCTGCATTGCTACT 58.696 41.667 10.49 0.00 0.00 2.57
3238 4875 4.151335 CGGTCTCATTATCTGCATTGCTAC 59.849 45.833 10.49 0.00 0.00 3.58
3239 4876 4.039124 TCGGTCTCATTATCTGCATTGCTA 59.961 41.667 10.49 0.00 0.00 3.49
3240 4877 3.136763 CGGTCTCATTATCTGCATTGCT 58.863 45.455 10.49 0.00 0.00 3.91
3241 4878 3.133691 TCGGTCTCATTATCTGCATTGC 58.866 45.455 0.46 0.46 0.00 3.56
3242 4879 5.052481 TCTTCGGTCTCATTATCTGCATTG 58.948 41.667 0.00 0.00 0.00 2.82
3243 4880 5.282055 TCTTCGGTCTCATTATCTGCATT 57.718 39.130 0.00 0.00 0.00 3.56
3244 4881 4.944619 TCTTCGGTCTCATTATCTGCAT 57.055 40.909 0.00 0.00 0.00 3.96
3245 4882 4.402474 TCTTCTTCGGTCTCATTATCTGCA 59.598 41.667 0.00 0.00 0.00 4.41
3246 4883 4.938080 TCTTCTTCGGTCTCATTATCTGC 58.062 43.478 0.00 0.00 0.00 4.26
3247 4884 5.461737 GCTTCTTCTTCGGTCTCATTATCTG 59.538 44.000 0.00 0.00 0.00 2.90
3248 4885 5.452636 GGCTTCTTCTTCGGTCTCATTATCT 60.453 44.000 0.00 0.00 0.00 1.98
3249 4886 4.747605 GGCTTCTTCTTCGGTCTCATTATC 59.252 45.833 0.00 0.00 0.00 1.75
3250 4887 4.698575 GGCTTCTTCTTCGGTCTCATTAT 58.301 43.478 0.00 0.00 0.00 1.28
3251 4888 3.428999 CGGCTTCTTCTTCGGTCTCATTA 60.429 47.826 0.00 0.00 0.00 1.90
3252 4889 2.675317 CGGCTTCTTCTTCGGTCTCATT 60.675 50.000 0.00 0.00 0.00 2.57
3254 6061 0.243907 CGGCTTCTTCTTCGGTCTCA 59.756 55.000 0.00 0.00 0.00 3.27
3256 6063 0.966920 TTCGGCTTCTTCTTCGGTCT 59.033 50.000 0.00 0.00 0.00 3.85
3263 6070 3.600388 CATACAACCTTCGGCTTCTTCT 58.400 45.455 0.00 0.00 0.00 2.85
3266 6073 1.679032 GGCATACAACCTTCGGCTTCT 60.679 52.381 0.00 0.00 0.00 2.85
3271 6078 0.390603 TGTCGGCATACAACCTTCGG 60.391 55.000 0.00 0.00 0.00 4.30
3272 6079 0.999406 CTGTCGGCATACAACCTTCG 59.001 55.000 0.00 0.00 0.00 3.79
3275 6082 2.236146 TCAATCTGTCGGCATACAACCT 59.764 45.455 0.00 0.00 0.00 3.50
3277 6084 3.000041 TGTCAATCTGTCGGCATACAAC 59.000 45.455 0.00 0.00 0.00 3.32
3279 6086 3.457234 GATGTCAATCTGTCGGCATACA 58.543 45.455 0.00 0.00 0.00 2.29
3280 6087 2.472861 CGATGTCAATCTGTCGGCATAC 59.527 50.000 0.00 0.00 0.00 2.39
3281 6088 2.100749 ACGATGTCAATCTGTCGGCATA 59.899 45.455 0.00 0.00 38.33 3.14
3282 6089 1.134699 ACGATGTCAATCTGTCGGCAT 60.135 47.619 0.00 0.00 38.33 4.40
3285 6092 1.560923 GGACGATGTCAATCTGTCGG 58.439 55.000 0.00 0.00 37.29 4.79
3286 6093 1.560923 GGGACGATGTCAATCTGTCG 58.439 55.000 0.00 0.00 37.29 4.35
3304 6111 2.463589 TTACTTCACCCTGGCTGCGG 62.464 60.000 0.00 0.00 0.00 5.69
3305 6112 0.605319 TTTACTTCACCCTGGCTGCG 60.605 55.000 0.00 0.00 0.00 5.18
3306 6113 1.616159 TTTTACTTCACCCTGGCTGC 58.384 50.000 0.00 0.00 0.00 5.25
3308 6115 2.594131 GGTTTTTACTTCACCCTGGCT 58.406 47.619 0.00 0.00 0.00 4.75
3309 6116 1.268625 CGGTTTTTACTTCACCCTGGC 59.731 52.381 0.00 0.00 0.00 4.85
3311 6118 3.207778 TGACGGTTTTTACTTCACCCTG 58.792 45.455 0.00 0.00 0.00 4.45
3315 6122 6.492254 ACAATCTTGACGGTTTTTACTTCAC 58.508 36.000 0.00 0.00 0.00 3.18
3316 6123 6.687081 ACAATCTTGACGGTTTTTACTTCA 57.313 33.333 0.00 0.00 0.00 3.02
3317 6124 7.190871 TGAACAATCTTGACGGTTTTTACTTC 58.809 34.615 0.00 0.00 0.00 3.01
3318 6125 7.090953 TGAACAATCTTGACGGTTTTTACTT 57.909 32.000 0.00 0.00 0.00 2.24
3320 6127 6.075046 GCTTGAACAATCTTGACGGTTTTTAC 60.075 38.462 0.00 0.00 0.00 2.01
3321 6128 5.974751 GCTTGAACAATCTTGACGGTTTTTA 59.025 36.000 0.00 0.00 0.00 1.52
3322 6129 4.803613 GCTTGAACAATCTTGACGGTTTTT 59.196 37.500 0.00 0.00 0.00 1.94
3323 6130 4.142271 TGCTTGAACAATCTTGACGGTTTT 60.142 37.500 0.00 0.00 0.00 2.43
3325 6132 2.948979 TGCTTGAACAATCTTGACGGTT 59.051 40.909 0.00 0.00 0.00 4.44
3326 6133 2.571212 TGCTTGAACAATCTTGACGGT 58.429 42.857 0.00 0.00 0.00 4.83
3327 6134 3.558505 CTTGCTTGAACAATCTTGACGG 58.441 45.455 0.00 0.00 0.00 4.79
3328 6135 3.558505 CCTTGCTTGAACAATCTTGACG 58.441 45.455 0.00 0.00 0.00 4.35
3329 6136 3.311966 GCCTTGCTTGAACAATCTTGAC 58.688 45.455 0.00 0.00 0.00 3.18
3331 6138 2.322161 CGCCTTGCTTGAACAATCTTG 58.678 47.619 0.00 0.00 0.00 3.02
3332 6139 1.270550 CCGCCTTGCTTGAACAATCTT 59.729 47.619 0.00 0.00 0.00 2.40
3334 6141 0.598065 ACCGCCTTGCTTGAACAATC 59.402 50.000 0.00 0.00 0.00 2.67
3335 6142 1.904287 TACCGCCTTGCTTGAACAAT 58.096 45.000 0.00 0.00 0.00 2.71
3336 6143 1.681538 TTACCGCCTTGCTTGAACAA 58.318 45.000 0.00 0.00 0.00 2.83
3337 6144 1.335496 GTTTACCGCCTTGCTTGAACA 59.665 47.619 0.00 0.00 0.00 3.18
3338 6145 1.335597 GGTTTACCGCCTTGCTTGAAC 60.336 52.381 0.00 0.00 0.00 3.18
3339 6146 0.955905 GGTTTACCGCCTTGCTTGAA 59.044 50.000 0.00 0.00 0.00 2.69
3340 6147 0.109723 AGGTTTACCGCCTTGCTTGA 59.890 50.000 0.00 0.00 42.08 3.02
3341 6148 0.521735 GAGGTTTACCGCCTTGCTTG 59.478 55.000 0.00 0.00 42.08 4.01
3342 6149 0.400594 AGAGGTTTACCGCCTTGCTT 59.599 50.000 0.00 0.00 42.08 3.91
3344 6151 0.803117 GAAGAGGTTTACCGCCTTGC 59.197 55.000 12.18 3.99 42.08 4.01
3345 6152 1.076332 CGAAGAGGTTTACCGCCTTG 58.924 55.000 12.18 0.00 42.08 3.61
3347 6154 1.079336 GCGAAGAGGTTTACCGCCT 60.079 57.895 0.00 0.00 42.08 5.52
3349 6156 1.359459 CTGGCGAAGAGGTTTACCGC 61.359 60.000 0.00 0.00 44.45 5.68
3350 6157 1.359459 GCTGGCGAAGAGGTTTACCG 61.359 60.000 0.00 0.00 42.08 4.02
3352 6159 1.359459 CCGCTGGCGAAGAGGTTTAC 61.359 60.000 16.79 0.00 40.80 2.01
3354 6161 2.358737 CCGCTGGCGAAGAGGTTT 60.359 61.111 16.79 0.00 40.80 3.27
3355 6162 3.302347 CTCCGCTGGCGAAGAGGTT 62.302 63.158 16.79 0.00 45.63 3.50
3356 6163 3.764466 CTCCGCTGGCGAAGAGGT 61.764 66.667 16.79 0.00 45.63 3.85
3357 6164 1.739338 ATACTCCGCTGGCGAAGAGG 61.739 60.000 16.79 1.90 46.77 3.69
3358 6165 0.596083 CATACTCCGCTGGCGAAGAG 60.596 60.000 16.79 16.13 42.83 2.85
3359 6166 1.035385 TCATACTCCGCTGGCGAAGA 61.035 55.000 16.79 5.25 42.83 2.87
3360 6167 0.596083 CTCATACTCCGCTGGCGAAG 60.596 60.000 16.79 8.23 42.83 3.79
3361 6168 1.437573 CTCATACTCCGCTGGCGAA 59.562 57.895 16.79 0.00 42.83 4.70
3363 6170 2.659897 GCTCATACTCCGCTGGCG 60.660 66.667 8.08 8.08 39.44 5.69
3364 6171 1.593750 CTGCTCATACTCCGCTGGC 60.594 63.158 0.00 0.00 0.00 4.85
3365 6172 1.068753 CCTGCTCATACTCCGCTGG 59.931 63.158 0.00 0.00 36.63 4.85
3366 6173 0.529337 CACCTGCTCATACTCCGCTG 60.529 60.000 0.00 0.00 0.00 5.18
3367 6174 1.680522 CCACCTGCTCATACTCCGCT 61.681 60.000 0.00 0.00 0.00 5.52
3369 6176 1.227380 GCCACCTGCTCATACTCCG 60.227 63.158 0.00 0.00 36.87 4.63
3370 6177 0.462759 GTGCCACCTGCTCATACTCC 60.463 60.000 0.00 0.00 42.00 3.85
3373 6180 1.815421 CCGTGCCACCTGCTCATAC 60.815 63.158 0.00 0.00 42.00 2.39
3374 6181 1.337384 ATCCGTGCCACCTGCTCATA 61.337 55.000 0.00 0.00 42.00 2.15
3377 6184 2.512515 GATCCGTGCCACCTGCTC 60.513 66.667 0.00 0.00 42.00 4.26
3378 6185 4.457496 CGATCCGTGCCACCTGCT 62.457 66.667 0.00 0.00 42.00 4.24
3379 6186 4.451150 TCGATCCGTGCCACCTGC 62.451 66.667 0.00 0.00 41.77 4.85
3382 6189 0.108520 TTTAGTCGATCCGTGCCACC 60.109 55.000 0.00 0.00 0.00 4.61
3384 6191 2.276201 CATTTTAGTCGATCCGTGCCA 58.724 47.619 0.00 0.00 0.00 4.92
3385 6192 1.597663 CCATTTTAGTCGATCCGTGCC 59.402 52.381 0.00 0.00 0.00 5.01
3386 6193 2.546778 TCCATTTTAGTCGATCCGTGC 58.453 47.619 0.00 0.00 0.00 5.34
3387 6194 3.494626 CCATCCATTTTAGTCGATCCGTG 59.505 47.826 0.00 0.00 0.00 4.94
3388 6195 3.386726 TCCATCCATTTTAGTCGATCCGT 59.613 43.478 0.00 0.00 0.00 4.69
3389 6196 3.741344 GTCCATCCATTTTAGTCGATCCG 59.259 47.826 0.00 0.00 0.00 4.18
3390 6197 4.065789 GGTCCATCCATTTTAGTCGATCC 58.934 47.826 0.00 0.00 35.97 3.36
3391 6198 3.741344 CGGTCCATCCATTTTAGTCGATC 59.259 47.826 0.00 0.00 35.57 3.69
3392 6199 3.386726 TCGGTCCATCCATTTTAGTCGAT 59.613 43.478 0.00 0.00 35.57 3.59
3393 6200 2.761767 TCGGTCCATCCATTTTAGTCGA 59.238 45.455 0.00 0.00 35.57 4.20
3394 6201 2.864343 GTCGGTCCATCCATTTTAGTCG 59.136 50.000 0.00 0.00 35.57 4.18
3395 6202 2.864343 CGTCGGTCCATCCATTTTAGTC 59.136 50.000 0.00 0.00 35.57 2.59
3396 6203 2.235402 ACGTCGGTCCATCCATTTTAGT 59.765 45.455 0.00 0.00 35.57 2.24
3397 6204 2.607635 CACGTCGGTCCATCCATTTTAG 59.392 50.000 0.00 0.00 35.57 1.85
3398 6205 2.623535 CACGTCGGTCCATCCATTTTA 58.376 47.619 0.00 0.00 35.57 1.52
3400 6207 0.392461 CCACGTCGGTCCATCCATTT 60.392 55.000 0.00 0.00 35.57 2.32
3401 6208 1.220749 CCACGTCGGTCCATCCATT 59.779 57.895 0.00 0.00 35.57 3.16
3402 6209 1.684391 TCCACGTCGGTCCATCCAT 60.684 57.895 0.00 0.00 35.57 3.41
3403 6210 2.283316 TCCACGTCGGTCCATCCA 60.283 61.111 0.00 0.00 35.57 3.41
3404 6211 2.183555 GTCCACGTCGGTCCATCC 59.816 66.667 0.00 0.00 35.57 3.51
3405 6212 2.183555 GGTCCACGTCGGTCCATC 59.816 66.667 12.76 0.00 42.22 3.51
3407 6214 4.953010 TCGGTCCACGTCGGTCCA 62.953 66.667 16.06 5.39 42.76 4.02
3408 6215 4.410743 GTCGGTCCACGTCGGTCC 62.411 72.222 0.00 9.21 44.69 4.46
3409 6216 1.577328 TTAGTCGGTCCACGTCGGTC 61.577 60.000 0.00 0.00 44.69 4.79
3410 6217 1.172180 TTTAGTCGGTCCACGTCGGT 61.172 55.000 0.00 0.00 44.69 4.69
3411 6218 0.039256 TTTTAGTCGGTCCACGTCGG 60.039 55.000 0.00 0.00 44.69 4.79
3412 6219 1.652124 CATTTTAGTCGGTCCACGTCG 59.348 52.381 0.00 0.00 44.69 5.12
3416 6223 5.272283 TCTATCCATTTTAGTCGGTCCAC 57.728 43.478 0.00 0.00 0.00 4.02
3417 6224 7.507956 TCTTATCTATCCATTTTAGTCGGTCCA 59.492 37.037 0.00 0.00 0.00 4.02
3418 6225 7.813627 GTCTTATCTATCCATTTTAGTCGGTCC 59.186 40.741 0.00 0.00 0.00 4.46
3420 6227 8.142551 GTGTCTTATCTATCCATTTTAGTCGGT 58.857 37.037 0.00 0.00 0.00 4.69
3421 6228 7.326305 CGTGTCTTATCTATCCATTTTAGTCGG 59.674 40.741 0.00 0.00 0.00 4.79
3422 6229 7.326305 CCGTGTCTTATCTATCCATTTTAGTCG 59.674 40.741 0.00 0.00 0.00 4.18
3431 6442 6.288941 TCAAAACCGTGTCTTATCTATCCA 57.711 37.500 0.00 0.00 0.00 3.41
3438 6611 5.298276 TGCTCTTTTCAAAACCGTGTCTTAT 59.702 36.000 0.00 0.00 0.00 1.73
3477 6650 3.768406 TGCACACATGACACAACTTTTC 58.232 40.909 0.00 0.00 0.00 2.29
3546 7543 1.066858 CGTACACCCACATTCTCTGCT 60.067 52.381 0.00 0.00 0.00 4.24
3548 7545 1.337728 TGCGTACACCCACATTCTCTG 60.338 52.381 0.00 0.00 0.00 3.35
3550 7547 1.463444 GTTGCGTACACCCACATTCTC 59.537 52.381 0.00 0.00 0.00 2.87
3561 7574 0.470766 AGGTTTGGAGGTTGCGTACA 59.529 50.000 0.00 0.00 0.00 2.90
3584 7597 5.751586 AGTGACTTCTTCTTAACCAAACCA 58.248 37.500 0.00 0.00 0.00 3.67
3599 7612 4.082190 GGGGGCTTTTCATAAAGTGACTTC 60.082 45.833 0.00 0.00 42.25 3.01
3600 7613 3.832490 GGGGGCTTTTCATAAAGTGACTT 59.168 43.478 0.00 0.00 42.25 3.01
3601 7614 3.431415 GGGGGCTTTTCATAAAGTGACT 58.569 45.455 0.00 0.00 42.25 3.41
3657 7679 2.922740 AGGCTGAAAACCGTCTACAA 57.077 45.000 0.00 0.00 0.00 2.41
3662 7687 4.174762 CTCTTACTAGGCTGAAAACCGTC 58.825 47.826 0.00 0.00 0.00 4.79
3664 7689 2.930682 GCTCTTACTAGGCTGAAAACCG 59.069 50.000 0.00 0.00 0.00 4.44
3678 7703 5.246307 AGGTCTGGTTGTAAATGCTCTTAC 58.754 41.667 2.59 2.59 33.22 2.34
3696 7721 3.851374 AGGTAGCCCGTATATAGAGGTCT 59.149 47.826 4.12 0.00 35.12 3.85
3700 7725 3.946558 GTCCAGGTAGCCCGTATATAGAG 59.053 52.174 0.00 0.00 35.12 2.43
3701 7726 3.331591 TGTCCAGGTAGCCCGTATATAGA 59.668 47.826 0.00 0.00 35.12 1.98
3708 7733 2.119832 AGTGTCCAGGTAGCCCGT 59.880 61.111 0.00 0.00 35.12 5.28
3750 7792 2.971598 CGGTTGTGGGGAGCCTGAT 61.972 63.158 0.00 0.00 0.00 2.90
3751 7793 3.636231 CGGTTGTGGGGAGCCTGA 61.636 66.667 0.00 0.00 0.00 3.86
3770 7812 1.217882 CGTCAGTCCAGGTGTTTGAC 58.782 55.000 0.00 0.00 35.88 3.18
3772 7814 1.507141 GCCGTCAGTCCAGGTGTTTG 61.507 60.000 0.00 0.00 0.00 2.93
3773 7815 1.227853 GCCGTCAGTCCAGGTGTTT 60.228 57.895 0.00 0.00 0.00 2.83
3778 7820 2.262915 GAGTGCCGTCAGTCCAGG 59.737 66.667 0.00 0.00 36.81 4.45
3803 7846 7.417797 CCAATATTCACCCTAAATTTGGACTGG 60.418 40.741 2.65 0.00 0.00 4.00
3807 7850 6.320164 CGTCCAATATTCACCCTAAATTTGGA 59.680 38.462 2.65 0.00 0.00 3.53
3816 7859 0.182775 GGGCGTCCAATATTCACCCT 59.817 55.000 0.00 0.00 32.88 4.34
3820 7863 0.179067 GTCCGGGCGTCCAATATTCA 60.179 55.000 6.96 0.00 0.00 2.57
3822 7865 1.227438 CGTCCGGGCGTCCAATATT 60.227 57.895 22.93 0.00 0.00 1.28
3850 7893 1.543429 GGCCCTAATGGTCATTCCGAG 60.543 57.143 0.00 0.00 39.18 4.63
3856 7900 1.145738 GACATGGGCCCTAATGGTCAT 59.854 52.381 25.70 1.42 42.20 3.06
3859 7903 1.006813 TTGACATGGGCCCTAATGGT 58.993 50.000 25.70 13.57 36.04 3.55
3863 7907 0.182537 CGGATTGACATGGGCCCTAA 59.817 55.000 25.70 2.97 0.00 2.69
3871 7915 2.555199 GAAGAGGGACGGATTGACATG 58.445 52.381 0.00 0.00 0.00 3.21
3872 7916 1.486726 GGAAGAGGGACGGATTGACAT 59.513 52.381 0.00 0.00 0.00 3.06
3873 7917 0.902531 GGAAGAGGGACGGATTGACA 59.097 55.000 0.00 0.00 0.00 3.58
3874 7918 1.196012 AGGAAGAGGGACGGATTGAC 58.804 55.000 0.00 0.00 0.00 3.18
3875 7919 1.555075 CAAGGAAGAGGGACGGATTGA 59.445 52.381 0.00 0.00 0.00 2.57
3876 7920 2.014068 GCAAGGAAGAGGGACGGATTG 61.014 57.143 0.00 0.00 0.00 2.67
3884 7937 4.803908 GGCGGGCAAGGAAGAGGG 62.804 72.222 0.00 0.00 0.00 4.30
3904 7957 3.662148 TCCCATAGCCACCATTCCATAAT 59.338 43.478 0.00 0.00 0.00 1.28
3906 7959 2.712384 TCCCATAGCCACCATTCCATA 58.288 47.619 0.00 0.00 0.00 2.74
3907 7960 1.533187 TCCCATAGCCACCATTCCAT 58.467 50.000 0.00 0.00 0.00 3.41
3915 7968 0.763035 ATACGGGTTCCCATAGCCAC 59.237 55.000 8.70 0.00 35.39 5.01
3928 7981 3.381272 ACAAAAATCCATCTGCATACGGG 59.619 43.478 0.00 0.00 0.00 5.28
3936 7989 2.489329 ACCGCAGACAAAAATCCATCTG 59.511 45.455 0.00 0.00 41.29 2.90
3946 7999 8.873215 TTTGAATAATTTTTACCGCAGACAAA 57.127 26.923 0.00 0.00 0.00 2.83
3973 8026 4.966965 TTTTCACTTGCCGTTTGTTCTA 57.033 36.364 0.00 0.00 0.00 2.10
4008 8061 6.889177 TGAGCATTGATGACCCTATTTTGTAA 59.111 34.615 0.00 0.00 0.00 2.41
4009 8062 6.318648 GTGAGCATTGATGACCCTATTTTGTA 59.681 38.462 0.00 0.00 0.00 2.41
4011 8064 5.359009 AGTGAGCATTGATGACCCTATTTTG 59.641 40.000 0.00 0.00 0.00 2.44
4019 8072 3.503363 TCACAAAGTGAGCATTGATGACC 59.497 43.478 0.00 0.00 37.67 4.02
4021 8074 5.065235 TCTTCACAAAGTGAGCATTGATGA 58.935 37.500 0.00 0.00 43.69 2.92
4032 8085 6.479990 TGTCAGTTCATACTCTTCACAAAGTG 59.520 38.462 0.00 0.00 33.95 3.16
4033 8086 6.480320 GTGTCAGTTCATACTCTTCACAAAGT 59.520 38.462 0.00 0.00 33.95 2.66
4044 8097 8.988546 AGAGATACATAGTGTCAGTTCATACT 57.011 34.615 0.00 0.00 34.00 2.12
4065 8118 8.367660 AGGATATGAACTGTCACTAAAAGAGA 57.632 34.615 0.00 0.00 36.31 3.10
4079 8135 8.929260 TGCATCATTTATGAAGGATATGAACT 57.071 30.769 0.00 0.00 40.69 3.01
4094 8150 7.744733 TGAGTAGGGACATAATGCATCATTTA 58.255 34.615 0.00 0.00 35.54 1.40
4100 8156 4.904251 ACTCTGAGTAGGGACATAATGCAT 59.096 41.667 8.91 0.00 0.00 3.96
4133 8190 5.123344 GCCACGTCATCCAAAATTAGTAAGT 59.877 40.000 0.00 0.00 0.00 2.24
4140 8197 5.659440 AAATAGCCACGTCATCCAAAATT 57.341 34.783 0.00 0.00 0.00 1.82
4149 8206 2.231964 ACCGTCTTAAATAGCCACGTCA 59.768 45.455 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.