Multiple sequence alignment - TraesCS3D01G224100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G224100 chr3D 100.000 2711 0 0 1 2711 305621169 305623879 0.000000e+00 5007.0
1 TraesCS3D01G224100 chr3B 92.090 2263 93 31 495 2692 416136478 416134237 0.000000e+00 3109.0
2 TraesCS3D01G224100 chr3A 91.891 2269 92 47 494 2692 423671139 423673385 0.000000e+00 3086.0
3 TraesCS3D01G224100 chr3A 87.981 416 39 6 85 490 669776702 669777116 5.250000e-132 481.0
4 TraesCS3D01G224100 chr7D 91.687 409 25 5 85 486 560829153 560829559 2.360000e-155 558.0
5 TraesCS3D01G224100 chr7D 98.864 88 1 0 1 88 224663009 224663096 1.000000e-34 158.0
6 TraesCS3D01G224100 chr5A 90.465 409 29 6 85 484 671452080 671451673 5.140000e-147 531.0
7 TraesCS3D01G224100 chr1D 89.976 409 30 7 85 484 383360502 383360908 4.000000e-143 518.0
8 TraesCS3D01G224100 chr1D 97.826 92 2 0 1 92 277878031 277877940 2.790000e-35 159.0
9 TraesCS3D01G224100 chr1D 97.826 92 2 0 1 92 426021435 426021526 2.790000e-35 159.0
10 TraesCS3D01G224100 chr1D 97.222 36 1 0 1229 1264 74929947 74929912 8.100000e-06 62.1
11 TraesCS3D01G224100 chr1B 88.636 396 33 6 102 487 476680211 476679818 3.160000e-129 472.0
12 TraesCS3D01G224100 chr7A 88.608 395 32 8 102 487 130748157 130748547 4.090000e-128 468.0
13 TraesCS3D01G224100 chr7A 91.667 288 23 1 85 372 635201061 635201347 5.440000e-107 398.0
14 TraesCS3D01G224100 chr2D 87.775 409 39 7 85 484 630082439 630082845 4.090000e-128 468.0
15 TraesCS3D01G224100 chr2D 80.142 141 25 1 1128 1268 388481930 388481793 4.780000e-18 102.0
16 TraesCS3D01G224100 chr2B 83.841 427 41 18 85 484 512426965 512427390 5.480000e-102 381.0
17 TraesCS3D01G224100 chr7B 98.889 90 1 0 4 93 69867372 69867283 7.770000e-36 161.0
18 TraesCS3D01G224100 chr6D 96.842 95 3 0 1 95 91064867 91064961 2.790000e-35 159.0
19 TraesCS3D01G224100 chr6D 96.842 95 2 1 1 95 21970812 21970905 1.000000e-34 158.0
20 TraesCS3D01G224100 chr6D 78.472 144 23 5 1136 1272 357592515 357592373 1.340000e-13 87.9
21 TraesCS3D01G224100 chr5B 98.889 90 0 1 1 89 262068334 262068423 2.790000e-35 159.0
22 TraesCS3D01G224100 chr4B 97.826 92 2 0 1 92 650725182 650725273 2.790000e-35 159.0
23 TraesCS3D01G224100 chr1A 97.826 92 2 0 1 92 485116578 485116669 2.790000e-35 159.0
24 TraesCS3D01G224100 chr1A 97.222 36 1 0 1229 1264 75256103 75256068 8.100000e-06 62.1
25 TraesCS3D01G224100 chr2A 80.142 141 25 1 1128 1268 524953218 524953081 4.780000e-18 102.0
26 TraesCS3D01G224100 chr6B 79.167 144 22 5 1136 1272 539195662 539195520 2.870000e-15 93.5
27 TraesCS3D01G224100 chr6A 79.433 141 21 5 1136 1269 499955058 499955197 2.870000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G224100 chr3D 305621169 305623879 2710 False 5007 5007 100.000 1 2711 1 chr3D.!!$F1 2710
1 TraesCS3D01G224100 chr3B 416134237 416136478 2241 True 3109 3109 92.090 495 2692 1 chr3B.!!$R1 2197
2 TraesCS3D01G224100 chr3A 423671139 423673385 2246 False 3086 3086 91.891 494 2692 1 chr3A.!!$F1 2198

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
184 185 0.033109 AGCCCCCTTGATTTGCCTAC 60.033 55.0 0.0 0.0 0.00 3.18 F
377 378 0.036875 GGGAGGACCAGGTGAGTTTG 59.963 60.0 0.0 0.0 39.85 2.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1665 1690 0.107752 CCTGAAGCTGCTTCTCCTCC 60.108 60.000 34.44 15.05 40.73 4.30 R
1991 2039 1.271656 ACAGCGTAGTACACCAACTCC 59.728 52.381 0.38 0.00 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.686334 CAAATATAACTCAAGGCAACCATTAGT 58.314 33.333 0.00 0.00 37.17 2.24
27 28 8.451908 AATATAACTCAAGGCAACCATTAGTC 57.548 34.615 0.00 0.00 37.17 2.59
28 29 3.073274 ACTCAAGGCAACCATTAGTCC 57.927 47.619 0.00 0.00 37.17 3.85
29 30 2.375174 ACTCAAGGCAACCATTAGTCCA 59.625 45.455 0.00 0.00 37.17 4.02
30 31 3.010584 ACTCAAGGCAACCATTAGTCCAT 59.989 43.478 0.00 0.00 37.17 3.41
31 32 4.227300 ACTCAAGGCAACCATTAGTCCATA 59.773 41.667 0.00 0.00 37.17 2.74
32 33 4.780815 TCAAGGCAACCATTAGTCCATAG 58.219 43.478 0.00 0.00 37.17 2.23
33 34 4.473196 TCAAGGCAACCATTAGTCCATAGA 59.527 41.667 0.00 0.00 37.17 1.98
34 35 4.696479 AGGCAACCATTAGTCCATAGAG 57.304 45.455 0.00 0.00 37.17 2.43
35 36 4.298626 AGGCAACCATTAGTCCATAGAGA 58.701 43.478 0.00 0.00 37.17 3.10
36 37 4.910304 AGGCAACCATTAGTCCATAGAGAT 59.090 41.667 0.00 0.00 37.17 2.75
37 38 5.370880 AGGCAACCATTAGTCCATAGAGATT 59.629 40.000 0.00 0.00 37.17 2.40
38 39 5.471456 GGCAACCATTAGTCCATAGAGATTG 59.529 44.000 0.00 0.00 0.00 2.67
39 40 6.058183 GCAACCATTAGTCCATAGAGATTGT 58.942 40.000 0.00 0.00 0.00 2.71
40 41 6.203723 GCAACCATTAGTCCATAGAGATTGTC 59.796 42.308 0.00 0.00 0.00 3.18
41 42 7.275183 CAACCATTAGTCCATAGAGATTGTCA 58.725 38.462 0.00 0.00 0.00 3.58
42 43 7.623999 ACCATTAGTCCATAGAGATTGTCAT 57.376 36.000 0.00 0.00 0.00 3.06
43 44 7.675062 ACCATTAGTCCATAGAGATTGTCATC 58.325 38.462 0.00 0.00 0.00 2.92
44 45 7.290948 ACCATTAGTCCATAGAGATTGTCATCA 59.709 37.037 0.00 0.00 0.00 3.07
45 46 8.152898 CCATTAGTCCATAGAGATTGTCATCAA 58.847 37.037 0.00 0.00 37.98 2.57
46 47 9.722184 CATTAGTCCATAGAGATTGTCATCAAT 57.278 33.333 0.00 0.00 45.57 2.57
50 51 8.153550 AGTCCATAGAGATTGTCATCAATTACC 58.846 37.037 0.00 0.00 43.33 2.85
51 52 7.933577 GTCCATAGAGATTGTCATCAATTACCA 59.066 37.037 0.00 0.00 43.33 3.25
52 53 8.493607 TCCATAGAGATTGTCATCAATTACCAA 58.506 33.333 0.00 0.00 43.33 3.67
53 54 9.123902 CCATAGAGATTGTCATCAATTACCAAA 57.876 33.333 0.00 0.00 43.33 3.28
56 57 7.830739 AGAGATTGTCATCAATTACCAAAACC 58.169 34.615 0.00 0.00 43.33 3.27
57 58 7.451255 AGAGATTGTCATCAATTACCAAAACCA 59.549 33.333 0.00 0.00 43.33 3.67
58 59 7.961351 AGATTGTCATCAATTACCAAAACCAA 58.039 30.769 0.00 0.00 43.33 3.67
59 60 8.428063 AGATTGTCATCAATTACCAAAACCAAA 58.572 29.630 0.00 0.00 43.33 3.28
60 61 7.778470 TTGTCATCAATTACCAAAACCAAAC 57.222 32.000 0.00 0.00 0.00 2.93
61 62 6.878317 TGTCATCAATTACCAAAACCAAACA 58.122 32.000 0.00 0.00 0.00 2.83
62 63 7.504403 TGTCATCAATTACCAAAACCAAACAT 58.496 30.769 0.00 0.00 0.00 2.71
63 64 7.440556 TGTCATCAATTACCAAAACCAAACATG 59.559 33.333 0.00 0.00 0.00 3.21
64 65 6.933521 TCATCAATTACCAAAACCAAACATGG 59.066 34.615 0.00 0.00 38.91 3.66
65 66 5.615289 TCAATTACCAAAACCAAACATGGG 58.385 37.500 0.00 0.00 37.26 4.00
66 67 4.632327 ATTACCAAAACCAAACATGGGG 57.368 40.909 0.00 0.00 37.26 4.96
67 68 1.135960 ACCAAAACCAAACATGGGGG 58.864 50.000 0.00 0.00 37.26 5.40
68 69 0.250684 CCAAAACCAAACATGGGGGC 60.251 55.000 0.00 0.00 0.00 5.80
69 70 0.602372 CAAAACCAAACATGGGGGCG 60.602 55.000 0.00 0.00 0.00 6.13
70 71 2.390306 AAAACCAAACATGGGGGCGC 62.390 55.000 0.00 0.00 0.00 6.53
82 83 3.747976 GGGCGCCGCATGTTCTTT 61.748 61.111 22.54 0.00 0.00 2.52
83 84 2.202479 GGCGCCGCATGTTCTTTC 60.202 61.111 12.58 0.00 0.00 2.62
84 85 2.560861 GCGCCGCATGTTCTTTCA 59.439 55.556 3.15 0.00 0.00 2.69
85 86 1.081509 GCGCCGCATGTTCTTTCAA 60.082 52.632 3.15 0.00 0.00 2.69
86 87 0.662970 GCGCCGCATGTTCTTTCAAA 60.663 50.000 3.15 0.00 0.00 2.69
87 88 1.330306 CGCCGCATGTTCTTTCAAAG 58.670 50.000 0.00 0.00 0.00 2.77
88 89 1.069296 CGCCGCATGTTCTTTCAAAGA 60.069 47.619 0.00 0.00 35.26 2.52
89 90 2.589014 GCCGCATGTTCTTTCAAAGAG 58.411 47.619 0.00 0.00 39.03 2.85
90 91 2.669391 GCCGCATGTTCTTTCAAAGAGG 60.669 50.000 0.00 0.00 39.03 3.69
91 92 2.813754 CCGCATGTTCTTTCAAAGAGGA 59.186 45.455 0.00 0.00 39.03 3.71
92 93 3.120060 CCGCATGTTCTTTCAAAGAGGAG 60.120 47.826 0.00 0.00 39.03 3.69
93 94 3.120060 CGCATGTTCTTTCAAAGAGGAGG 60.120 47.826 0.00 0.00 39.03 4.30
94 95 3.192212 GCATGTTCTTTCAAAGAGGAGGG 59.808 47.826 0.00 0.00 39.03 4.30
95 96 4.655963 CATGTTCTTTCAAAGAGGAGGGA 58.344 43.478 0.00 0.00 39.03 4.20
96 97 5.259632 CATGTTCTTTCAAAGAGGAGGGAT 58.740 41.667 0.00 0.00 39.03 3.85
97 98 4.655963 TGTTCTTTCAAAGAGGAGGGATG 58.344 43.478 0.00 0.00 39.03 3.51
98 99 4.104738 TGTTCTTTCAAAGAGGAGGGATGT 59.895 41.667 0.00 0.00 39.03 3.06
99 100 4.292186 TCTTTCAAAGAGGAGGGATGTG 57.708 45.455 0.00 0.00 32.71 3.21
100 101 3.009473 TCTTTCAAAGAGGAGGGATGTGG 59.991 47.826 0.00 0.00 32.71 4.17
101 102 2.342406 TCAAAGAGGAGGGATGTGGA 57.658 50.000 0.00 0.00 0.00 4.02
102 103 2.631384 TCAAAGAGGAGGGATGTGGAA 58.369 47.619 0.00 0.00 0.00 3.53
103 104 2.573462 TCAAAGAGGAGGGATGTGGAAG 59.427 50.000 0.00 0.00 0.00 3.46
104 105 2.307098 CAAAGAGGAGGGATGTGGAAGT 59.693 50.000 0.00 0.00 0.00 3.01
105 106 1.577736 AGAGGAGGGATGTGGAAGTG 58.422 55.000 0.00 0.00 0.00 3.16
106 107 1.079490 AGAGGAGGGATGTGGAAGTGA 59.921 52.381 0.00 0.00 0.00 3.41
107 108 1.484240 GAGGAGGGATGTGGAAGTGAG 59.516 57.143 0.00 0.00 0.00 3.51
108 109 0.107459 GGAGGGATGTGGAAGTGAGC 60.107 60.000 0.00 0.00 0.00 4.26
109 110 0.908198 GAGGGATGTGGAAGTGAGCT 59.092 55.000 0.00 0.00 0.00 4.09
110 111 2.111384 GAGGGATGTGGAAGTGAGCTA 58.889 52.381 0.00 0.00 0.00 3.32
111 112 2.501723 GAGGGATGTGGAAGTGAGCTAA 59.498 50.000 0.00 0.00 0.00 3.09
112 113 2.912956 AGGGATGTGGAAGTGAGCTAAA 59.087 45.455 0.00 0.00 0.00 1.85
113 114 3.525199 AGGGATGTGGAAGTGAGCTAAAT 59.475 43.478 0.00 0.00 0.00 1.40
114 115 3.879892 GGGATGTGGAAGTGAGCTAAATC 59.120 47.826 0.00 0.00 0.00 2.17
115 116 4.384647 GGGATGTGGAAGTGAGCTAAATCT 60.385 45.833 0.00 0.00 0.00 2.40
116 117 4.813697 GGATGTGGAAGTGAGCTAAATCTC 59.186 45.833 0.00 0.00 0.00 2.75
117 118 4.890158 TGTGGAAGTGAGCTAAATCTCA 57.110 40.909 0.00 0.00 40.50 3.27
127 128 5.880901 TGAGCTAAATCTCACCTTTTTCCT 58.119 37.500 0.00 0.00 38.11 3.36
128 129 6.306987 TGAGCTAAATCTCACCTTTTTCCTT 58.693 36.000 0.00 0.00 38.11 3.36
129 130 6.777580 TGAGCTAAATCTCACCTTTTTCCTTT 59.222 34.615 0.00 0.00 38.11 3.11
130 131 6.986250 AGCTAAATCTCACCTTTTTCCTTTG 58.014 36.000 0.00 0.00 0.00 2.77
131 132 5.635280 GCTAAATCTCACCTTTTTCCTTTGC 59.365 40.000 0.00 0.00 0.00 3.68
132 133 5.876651 AAATCTCACCTTTTTCCTTTGCT 57.123 34.783 0.00 0.00 0.00 3.91
133 134 5.876651 AATCTCACCTTTTTCCTTTGCTT 57.123 34.783 0.00 0.00 0.00 3.91
134 135 5.876651 ATCTCACCTTTTTCCTTTGCTTT 57.123 34.783 0.00 0.00 0.00 3.51
135 136 5.675684 TCTCACCTTTTTCCTTTGCTTTT 57.324 34.783 0.00 0.00 0.00 2.27
136 137 6.048732 TCTCACCTTTTTCCTTTGCTTTTT 57.951 33.333 0.00 0.00 0.00 1.94
166 167 4.771590 TTGCTAGGCAATCTGAAACAAG 57.228 40.909 0.51 0.00 43.99 3.16
167 168 2.489329 TGCTAGGCAATCTGAAACAAGC 59.511 45.455 0.00 0.00 34.76 4.01
168 169 2.159324 GCTAGGCAATCTGAAACAAGCC 60.159 50.000 0.00 0.00 42.31 4.35
169 170 1.260544 AGGCAATCTGAAACAAGCCC 58.739 50.000 0.00 0.00 42.97 5.19
170 171 0.247460 GGCAATCTGAAACAAGCCCC 59.753 55.000 0.00 0.00 36.17 5.80
171 172 0.247460 GCAATCTGAAACAAGCCCCC 59.753 55.000 0.00 0.00 0.00 5.40
172 173 1.928868 CAATCTGAAACAAGCCCCCT 58.071 50.000 0.00 0.00 0.00 4.79
173 174 2.250924 CAATCTGAAACAAGCCCCCTT 58.749 47.619 0.00 0.00 0.00 3.95
181 182 4.135293 AAGCCCCCTTGATTTGCC 57.865 55.556 0.00 0.00 0.00 4.52
182 183 1.471081 AAGCCCCCTTGATTTGCCT 59.529 52.632 0.00 0.00 0.00 4.75
183 184 0.709992 AAGCCCCCTTGATTTGCCTA 59.290 50.000 0.00 0.00 0.00 3.93
184 185 0.033109 AGCCCCCTTGATTTGCCTAC 60.033 55.000 0.00 0.00 0.00 3.18
185 186 0.324275 GCCCCCTTGATTTGCCTACA 60.324 55.000 0.00 0.00 0.00 2.74
186 187 1.767759 CCCCCTTGATTTGCCTACAG 58.232 55.000 0.00 0.00 0.00 2.74
187 188 1.284785 CCCCCTTGATTTGCCTACAGA 59.715 52.381 0.00 0.00 0.00 3.41
188 189 2.291540 CCCCCTTGATTTGCCTACAGAA 60.292 50.000 0.00 0.00 0.00 3.02
189 190 3.019564 CCCCTTGATTTGCCTACAGAAG 58.980 50.000 0.00 0.00 0.00 2.85
190 191 3.308402 CCCCTTGATTTGCCTACAGAAGA 60.308 47.826 0.00 0.00 0.00 2.87
191 192 4.335416 CCCTTGATTTGCCTACAGAAGAA 58.665 43.478 0.00 0.00 0.00 2.52
192 193 4.766891 CCCTTGATTTGCCTACAGAAGAAA 59.233 41.667 0.00 0.00 0.00 2.52
193 194 5.335976 CCCTTGATTTGCCTACAGAAGAAAC 60.336 44.000 0.00 0.00 0.00 2.78
194 195 5.335976 CCTTGATTTGCCTACAGAAGAAACC 60.336 44.000 0.00 0.00 0.00 3.27
195 196 4.079253 TGATTTGCCTACAGAAGAAACCC 58.921 43.478 0.00 0.00 0.00 4.11
196 197 3.876309 TTTGCCTACAGAAGAAACCCT 57.124 42.857 0.00 0.00 0.00 4.34
197 198 4.986054 TTTGCCTACAGAAGAAACCCTA 57.014 40.909 0.00 0.00 0.00 3.53
198 199 4.986054 TTGCCTACAGAAGAAACCCTAA 57.014 40.909 0.00 0.00 0.00 2.69
199 200 5.514500 TTGCCTACAGAAGAAACCCTAAT 57.486 39.130 0.00 0.00 0.00 1.73
200 201 4.843728 TGCCTACAGAAGAAACCCTAATG 58.156 43.478 0.00 0.00 0.00 1.90
201 202 4.200092 GCCTACAGAAGAAACCCTAATGG 58.800 47.826 0.00 0.00 41.37 3.16
202 203 4.080526 GCCTACAGAAGAAACCCTAATGGA 60.081 45.833 0.00 0.00 38.00 3.41
203 204 5.675538 CCTACAGAAGAAACCCTAATGGAG 58.324 45.833 0.00 0.00 38.00 3.86
204 205 3.956744 ACAGAAGAAACCCTAATGGAGC 58.043 45.455 0.00 0.00 38.00 4.70
205 206 3.282885 CAGAAGAAACCCTAATGGAGCC 58.717 50.000 0.00 0.00 38.00 4.70
206 207 2.092914 AGAAGAAACCCTAATGGAGCCG 60.093 50.000 0.00 0.00 38.00 5.52
207 208 0.107165 AGAAACCCTAATGGAGCCGC 60.107 55.000 0.00 0.00 38.00 6.53
208 209 1.076995 AAACCCTAATGGAGCCGCC 60.077 57.895 0.00 0.00 38.00 6.13
216 217 4.113815 TGGAGCCGCCATTGGAGG 62.114 66.667 20.25 20.25 45.66 4.30
217 218 4.883354 GGAGCCGCCATTGGAGGG 62.883 72.222 24.74 16.41 43.05 4.30
220 221 3.451894 GCCGCCATTGGAGGGTTG 61.452 66.667 24.74 2.14 43.05 3.77
221 222 2.035626 CCGCCATTGGAGGGTTGT 59.964 61.111 17.16 0.00 39.04 3.32
222 223 2.342650 CCGCCATTGGAGGGTTGTG 61.343 63.158 17.16 0.00 39.04 3.33
223 224 1.303236 CGCCATTGGAGGGTTGTGA 60.303 57.895 6.95 0.00 0.00 3.58
224 225 0.893270 CGCCATTGGAGGGTTGTGAA 60.893 55.000 6.95 0.00 0.00 3.18
225 226 0.890683 GCCATTGGAGGGTTGTGAAG 59.109 55.000 6.95 0.00 0.00 3.02
226 227 1.549203 CCATTGGAGGGTTGTGAAGG 58.451 55.000 0.00 0.00 0.00 3.46
227 228 1.203050 CCATTGGAGGGTTGTGAAGGT 60.203 52.381 0.00 0.00 0.00 3.50
228 229 2.597455 CATTGGAGGGTTGTGAAGGTT 58.403 47.619 0.00 0.00 0.00 3.50
229 230 2.838637 TTGGAGGGTTGTGAAGGTTT 57.161 45.000 0.00 0.00 0.00 3.27
230 231 2.838637 TGGAGGGTTGTGAAGGTTTT 57.161 45.000 0.00 0.00 0.00 2.43
231 232 2.383855 TGGAGGGTTGTGAAGGTTTTG 58.616 47.619 0.00 0.00 0.00 2.44
232 233 2.291930 TGGAGGGTTGTGAAGGTTTTGT 60.292 45.455 0.00 0.00 0.00 2.83
233 234 2.100749 GGAGGGTTGTGAAGGTTTTGTG 59.899 50.000 0.00 0.00 0.00 3.33
234 235 2.100749 GAGGGTTGTGAAGGTTTTGTGG 59.899 50.000 0.00 0.00 0.00 4.17
235 236 2.104170 GGGTTGTGAAGGTTTTGTGGA 58.896 47.619 0.00 0.00 0.00 4.02
236 237 2.698274 GGGTTGTGAAGGTTTTGTGGAT 59.302 45.455 0.00 0.00 0.00 3.41
237 238 3.243737 GGGTTGTGAAGGTTTTGTGGATC 60.244 47.826 0.00 0.00 0.00 3.36
238 239 3.636764 GGTTGTGAAGGTTTTGTGGATCT 59.363 43.478 0.00 0.00 0.00 2.75
239 240 4.499696 GGTTGTGAAGGTTTTGTGGATCTG 60.500 45.833 0.00 0.00 0.00 2.90
240 241 3.221771 TGTGAAGGTTTTGTGGATCTGG 58.778 45.455 0.00 0.00 0.00 3.86
241 242 3.117701 TGTGAAGGTTTTGTGGATCTGGA 60.118 43.478 0.00 0.00 0.00 3.86
242 243 3.888930 GTGAAGGTTTTGTGGATCTGGAA 59.111 43.478 0.00 0.00 0.00 3.53
243 244 4.022849 GTGAAGGTTTTGTGGATCTGGAAG 60.023 45.833 0.00 0.00 0.00 3.46
244 245 3.884037 AGGTTTTGTGGATCTGGAAGT 57.116 42.857 0.00 0.00 33.76 3.01
245 246 3.490348 AGGTTTTGTGGATCTGGAAGTG 58.510 45.455 0.00 0.00 33.76 3.16
246 247 2.558359 GGTTTTGTGGATCTGGAAGTGG 59.442 50.000 0.00 0.00 33.76 4.00
247 248 1.909700 TTTGTGGATCTGGAAGTGGC 58.090 50.000 0.00 0.00 33.76 5.01
248 249 0.321564 TTGTGGATCTGGAAGTGGCG 60.322 55.000 0.00 0.00 33.76 5.69
249 250 1.191489 TGTGGATCTGGAAGTGGCGA 61.191 55.000 0.00 0.00 33.76 5.54
250 251 0.460987 GTGGATCTGGAAGTGGCGAG 60.461 60.000 0.00 0.00 33.76 5.03
251 252 1.144936 GGATCTGGAAGTGGCGAGG 59.855 63.158 0.00 0.00 33.76 4.63
252 253 1.144936 GATCTGGAAGTGGCGAGGG 59.855 63.158 0.00 0.00 33.76 4.30
253 254 2.317149 GATCTGGAAGTGGCGAGGGG 62.317 65.000 0.00 0.00 33.76 4.79
254 255 2.822643 ATCTGGAAGTGGCGAGGGGA 62.823 60.000 0.00 0.00 33.76 4.81
255 256 2.528127 TGGAAGTGGCGAGGGGAA 60.528 61.111 0.00 0.00 0.00 3.97
256 257 2.269241 GGAAGTGGCGAGGGGAAG 59.731 66.667 0.00 0.00 0.00 3.46
257 258 2.269241 GAAGTGGCGAGGGGAAGG 59.731 66.667 0.00 0.00 0.00 3.46
258 259 3.330720 AAGTGGCGAGGGGAAGGG 61.331 66.667 0.00 0.00 0.00 3.95
263 264 4.410400 GCGAGGGGAAGGGGTGTG 62.410 72.222 0.00 0.00 0.00 3.82
264 265 4.410400 CGAGGGGAAGGGGTGTGC 62.410 72.222 0.00 0.00 0.00 4.57
265 266 4.048470 GAGGGGAAGGGGTGTGCC 62.048 72.222 0.00 0.00 0.00 5.01
268 269 4.717313 GGGAAGGGGTGTGCCGTC 62.717 72.222 0.00 0.00 34.97 4.79
269 270 4.717313 GGAAGGGGTGTGCCGTCC 62.717 72.222 0.00 0.00 34.97 4.79
270 271 3.637273 GAAGGGGTGTGCCGTCCT 61.637 66.667 0.00 0.00 34.97 3.85
271 272 3.175710 AAGGGGTGTGCCGTCCTT 61.176 61.111 0.00 0.00 33.36 3.36
272 273 2.692273 GAAGGGGTGTGCCGTCCTTT 62.692 60.000 0.00 0.00 36.81 3.11
273 274 2.203437 GGGGTGTGCCGTCCTTTT 60.203 61.111 0.00 0.00 34.97 2.27
274 275 1.830847 GGGGTGTGCCGTCCTTTTT 60.831 57.895 0.00 0.00 34.97 1.94
275 276 1.362355 GGGTGTGCCGTCCTTTTTG 59.638 57.895 0.00 0.00 34.97 2.44
276 277 1.362355 GGTGTGCCGTCCTTTTTGG 59.638 57.895 0.00 0.00 37.10 3.28
280 281 4.653555 GCCGTCCTTTTTGGCTTG 57.346 55.556 0.00 0.00 45.40 4.01
281 282 1.006220 GCCGTCCTTTTTGGCTTGG 60.006 57.895 0.00 0.00 45.40 3.61
282 283 1.665442 CCGTCCTTTTTGGCTTGGG 59.335 57.895 0.00 0.00 35.26 4.12
283 284 0.825840 CCGTCCTTTTTGGCTTGGGA 60.826 55.000 0.00 0.00 35.26 4.37
284 285 0.598065 CGTCCTTTTTGGCTTGGGAG 59.402 55.000 0.00 0.00 35.26 4.30
285 286 1.817740 CGTCCTTTTTGGCTTGGGAGA 60.818 52.381 0.00 0.00 35.26 3.71
286 287 1.889170 GTCCTTTTTGGCTTGGGAGAG 59.111 52.381 0.00 0.00 35.26 3.20
287 288 1.780309 TCCTTTTTGGCTTGGGAGAGA 59.220 47.619 0.00 0.00 35.26 3.10
288 289 2.176798 TCCTTTTTGGCTTGGGAGAGAA 59.823 45.455 0.00 0.00 35.26 2.87
289 290 2.560105 CCTTTTTGGCTTGGGAGAGAAG 59.440 50.000 0.00 0.00 0.00 2.85
290 291 3.490348 CTTTTTGGCTTGGGAGAGAAGA 58.510 45.455 0.00 0.00 0.00 2.87
291 292 3.593442 TTTTGGCTTGGGAGAGAAGAA 57.407 42.857 0.00 0.00 0.00 2.52
292 293 2.867109 TTGGCTTGGGAGAGAAGAAG 57.133 50.000 0.00 0.00 0.00 2.85
293 294 0.987294 TGGCTTGGGAGAGAAGAAGG 59.013 55.000 0.00 0.00 0.00 3.46
294 295 0.988063 GGCTTGGGAGAGAAGAAGGT 59.012 55.000 0.00 0.00 0.00 3.50
295 296 1.339535 GGCTTGGGAGAGAAGAAGGTG 60.340 57.143 0.00 0.00 0.00 4.00
296 297 1.339535 GCTTGGGAGAGAAGAAGGTGG 60.340 57.143 0.00 0.00 0.00 4.61
297 298 1.280421 CTTGGGAGAGAAGAAGGTGGG 59.720 57.143 0.00 0.00 0.00 4.61
298 299 0.547712 TGGGAGAGAAGAAGGTGGGG 60.548 60.000 0.00 0.00 0.00 4.96
299 300 1.604915 GGAGAGAAGAAGGTGGGGC 59.395 63.158 0.00 0.00 0.00 5.80
300 301 0.912006 GGAGAGAAGAAGGTGGGGCT 60.912 60.000 0.00 0.00 0.00 5.19
301 302 0.251634 GAGAGAAGAAGGTGGGGCTG 59.748 60.000 0.00 0.00 0.00 4.85
302 303 1.204113 AGAGAAGAAGGTGGGGCTGG 61.204 60.000 0.00 0.00 0.00 4.85
303 304 2.203549 GAGAAGAAGGTGGGGCTGGG 62.204 65.000 0.00 0.00 0.00 4.45
304 305 3.268032 AAGAAGGTGGGGCTGGGG 61.268 66.667 0.00 0.00 0.00 4.96
308 309 3.840612 AAGGTGGGGCTGGGGGTTA 62.841 63.158 0.00 0.00 0.00 2.85
309 310 3.739613 GGTGGGGCTGGGGGTTAG 61.740 72.222 0.00 0.00 0.00 2.34
310 311 3.739613 GTGGGGCTGGGGGTTAGG 61.740 72.222 0.00 0.00 0.00 2.69
311 312 4.295284 TGGGGCTGGGGGTTAGGT 62.295 66.667 0.00 0.00 0.00 3.08
312 313 3.739613 GGGGCTGGGGGTTAGGTG 61.740 72.222 0.00 0.00 0.00 4.00
313 314 2.612746 GGGCTGGGGGTTAGGTGA 60.613 66.667 0.00 0.00 0.00 4.02
314 315 2.680370 GGGCTGGGGGTTAGGTGAG 61.680 68.421 0.00 0.00 0.00 3.51
315 316 2.680370 GGCTGGGGGTTAGGTGAGG 61.680 68.421 0.00 0.00 0.00 3.86
316 317 1.615424 GCTGGGGGTTAGGTGAGGA 60.615 63.158 0.00 0.00 0.00 3.71
317 318 1.627297 GCTGGGGGTTAGGTGAGGAG 61.627 65.000 0.00 0.00 0.00 3.69
318 319 0.042731 CTGGGGGTTAGGTGAGGAGA 59.957 60.000 0.00 0.00 0.00 3.71
319 320 0.494551 TGGGGGTTAGGTGAGGAGAA 59.505 55.000 0.00 0.00 0.00 2.87
320 321 1.132332 TGGGGGTTAGGTGAGGAGAAA 60.132 52.381 0.00 0.00 0.00 2.52
321 322 1.990327 GGGGGTTAGGTGAGGAGAAAA 59.010 52.381 0.00 0.00 0.00 2.29
322 323 2.026169 GGGGGTTAGGTGAGGAGAAAAG 60.026 54.545 0.00 0.00 0.00 2.27
323 324 2.026169 GGGGTTAGGTGAGGAGAAAAGG 60.026 54.545 0.00 0.00 0.00 3.11
324 325 2.910977 GGGTTAGGTGAGGAGAAAAGGA 59.089 50.000 0.00 0.00 0.00 3.36
325 326 3.055021 GGGTTAGGTGAGGAGAAAAGGAG 60.055 52.174 0.00 0.00 0.00 3.69
326 327 3.838903 GGTTAGGTGAGGAGAAAAGGAGA 59.161 47.826 0.00 0.00 0.00 3.71
327 328 4.322877 GGTTAGGTGAGGAGAAAAGGAGAC 60.323 50.000 0.00 0.00 0.00 3.36
328 329 1.896465 AGGTGAGGAGAAAAGGAGACG 59.104 52.381 0.00 0.00 0.00 4.18
329 330 1.673329 GGTGAGGAGAAAAGGAGACGC 60.673 57.143 0.00 0.00 0.00 5.19
330 331 0.608640 TGAGGAGAAAAGGAGACGCC 59.391 55.000 0.00 0.00 0.00 5.68
331 332 0.108089 GAGGAGAAAAGGAGACGCCC 60.108 60.000 0.00 0.00 37.37 6.13
332 333 0.836400 AGGAGAAAAGGAGACGCCCA 60.836 55.000 0.00 0.00 37.37 5.36
333 334 0.391793 GGAGAAAAGGAGACGCCCAG 60.392 60.000 0.00 0.00 37.37 4.45
334 335 0.391793 GAGAAAAGGAGACGCCCAGG 60.392 60.000 0.00 0.00 37.37 4.45
335 336 1.377333 GAAAAGGAGACGCCCAGGG 60.377 63.158 0.00 0.00 37.37 4.45
336 337 2.821679 GAAAAGGAGACGCCCAGGGG 62.822 65.000 7.91 3.48 37.37 4.79
337 338 4.658786 AAGGAGACGCCCAGGGGT 62.659 66.667 7.91 7.13 44.05 4.95
367 368 4.364686 GGGGGAAGGGGAGGACCA 62.365 72.222 0.00 0.00 42.91 4.02
368 369 2.692741 GGGGAAGGGGAGGACCAG 60.693 72.222 0.00 0.00 42.91 4.00
369 370 2.692741 GGGAAGGGGAGGACCAGG 60.693 72.222 0.00 0.00 42.91 4.45
370 371 2.125225 GGAAGGGGAGGACCAGGT 59.875 66.667 0.00 0.00 42.91 4.00
371 372 2.301738 GGAAGGGGAGGACCAGGTG 61.302 68.421 0.00 0.00 42.91 4.00
372 373 1.229529 GAAGGGGAGGACCAGGTGA 60.230 63.158 0.00 0.00 42.91 4.02
373 374 1.229658 AAGGGGAGGACCAGGTGAG 60.230 63.158 0.00 0.00 42.91 3.51
374 375 2.049792 AAGGGGAGGACCAGGTGAGT 62.050 60.000 0.00 0.00 42.91 3.41
375 376 1.539124 GGGGAGGACCAGGTGAGTT 60.539 63.158 0.00 0.00 42.91 3.01
376 377 1.134438 GGGGAGGACCAGGTGAGTTT 61.134 60.000 0.00 0.00 42.91 2.66
377 378 0.036875 GGGAGGACCAGGTGAGTTTG 59.963 60.000 0.00 0.00 39.85 2.93
378 379 0.606673 GGAGGACCAGGTGAGTTTGC 60.607 60.000 0.00 0.00 35.97 3.68
379 380 0.606673 GAGGACCAGGTGAGTTTGCC 60.607 60.000 0.00 0.00 0.00 4.52
380 381 1.603739 GGACCAGGTGAGTTTGCCC 60.604 63.158 0.00 0.00 0.00 5.36
381 382 1.966451 GACCAGGTGAGTTTGCCCG 60.966 63.158 0.00 0.00 0.00 6.13
382 383 3.365265 CCAGGTGAGTTTGCCCGC 61.365 66.667 0.00 0.00 0.00 6.13
383 384 2.281761 CAGGTGAGTTTGCCCGCT 60.282 61.111 0.00 0.00 0.00 5.52
384 385 2.032681 AGGTGAGTTTGCCCGCTC 59.967 61.111 0.00 0.00 0.00 5.03
385 386 3.423154 GGTGAGTTTGCCCGCTCG 61.423 66.667 0.00 0.00 34.67 5.03
386 387 2.357034 GTGAGTTTGCCCGCTCGA 60.357 61.111 0.00 0.00 34.67 4.04
387 388 1.741770 GTGAGTTTGCCCGCTCGAT 60.742 57.895 0.00 0.00 34.67 3.59
388 389 1.741401 TGAGTTTGCCCGCTCGATG 60.741 57.895 0.00 0.00 34.67 3.84
389 390 2.436646 AGTTTGCCCGCTCGATGG 60.437 61.111 0.00 0.00 0.00 3.51
390 391 2.746277 GTTTGCCCGCTCGATGGT 60.746 61.111 3.45 0.00 0.00 3.55
391 392 2.033448 TTTGCCCGCTCGATGGTT 59.967 55.556 3.45 0.00 0.00 3.67
392 393 2.331893 TTTGCCCGCTCGATGGTTG 61.332 57.895 3.45 0.00 0.00 3.77
393 394 4.776322 TGCCCGCTCGATGGTTGG 62.776 66.667 3.45 0.00 0.00 3.77
394 395 4.467084 GCCCGCTCGATGGTTGGA 62.467 66.667 3.45 0.00 0.00 3.53
395 396 2.511600 CCCGCTCGATGGTTGGAC 60.512 66.667 3.45 0.00 0.00 4.02
396 397 2.885644 CCGCTCGATGGTTGGACG 60.886 66.667 0.00 0.00 0.00 4.79
397 398 3.554692 CGCTCGATGGTTGGACGC 61.555 66.667 0.00 0.00 0.00 5.19
398 399 3.554692 GCTCGATGGTTGGACGCG 61.555 66.667 3.53 3.53 0.00 6.01
399 400 2.885644 CTCGATGGTTGGACGCGG 60.886 66.667 12.47 0.00 0.00 6.46
400 401 4.444838 TCGATGGTTGGACGCGGG 62.445 66.667 12.47 0.00 0.00 6.13
401 402 4.444838 CGATGGTTGGACGCGGGA 62.445 66.667 12.47 0.00 0.00 5.14
402 403 2.046700 GATGGTTGGACGCGGGAA 60.047 61.111 12.47 0.00 0.00 3.97
403 404 1.451387 GATGGTTGGACGCGGGAAT 60.451 57.895 12.47 0.00 0.00 3.01
404 405 1.436983 GATGGTTGGACGCGGGAATC 61.437 60.000 12.47 0.00 0.00 2.52
405 406 2.046700 GGTTGGACGCGGGAATCA 60.047 61.111 12.47 0.00 0.00 2.57
406 407 2.106683 GGTTGGACGCGGGAATCAG 61.107 63.158 12.47 0.00 0.00 2.90
407 408 2.106683 GTTGGACGCGGGAATCAGG 61.107 63.158 12.47 0.00 0.00 3.86
408 409 2.287274 TTGGACGCGGGAATCAGGA 61.287 57.895 12.47 0.00 0.00 3.86
409 410 2.107141 GGACGCGGGAATCAGGAG 59.893 66.667 12.47 0.00 0.00 3.69
410 411 2.107141 GACGCGGGAATCAGGAGG 59.893 66.667 12.47 0.00 0.00 4.30
411 412 3.447025 GACGCGGGAATCAGGAGGG 62.447 68.421 12.47 0.00 0.00 4.30
412 413 4.241555 CGCGGGAATCAGGAGGGG 62.242 72.222 0.00 0.00 0.00 4.79
413 414 3.878667 GCGGGAATCAGGAGGGGG 61.879 72.222 0.00 0.00 0.00 5.40
414 415 2.040884 CGGGAATCAGGAGGGGGA 60.041 66.667 0.00 0.00 0.00 4.81
415 416 2.444256 CGGGAATCAGGAGGGGGAC 61.444 68.421 0.00 0.00 0.00 4.46
428 429 4.164264 GGGACCAGGGCTTTCCTA 57.836 61.111 0.00 0.00 46.12 2.94
429 430 2.634100 GGGACCAGGGCTTTCCTAT 58.366 57.895 0.00 0.00 46.12 2.57
430 431 0.474614 GGGACCAGGGCTTTCCTATC 59.525 60.000 0.00 0.00 46.12 2.08
431 432 0.106894 GGACCAGGGCTTTCCTATCG 59.893 60.000 0.00 0.00 46.12 2.92
432 433 0.106894 GACCAGGGCTTTCCTATCGG 59.893 60.000 0.00 0.00 46.12 4.18
433 434 1.345715 ACCAGGGCTTTCCTATCGGG 61.346 60.000 0.00 0.00 46.12 5.14
434 435 1.451936 CAGGGCTTTCCTATCGGGG 59.548 63.158 0.00 0.00 46.12 5.73
435 436 1.054406 CAGGGCTTTCCTATCGGGGA 61.054 60.000 0.00 0.00 46.12 4.81
436 437 0.327191 AGGGCTTTCCTATCGGGGAA 60.327 55.000 0.00 0.00 45.98 3.97
437 438 0.179026 GGGCTTTCCTATCGGGGAAC 60.179 60.000 5.24 0.00 44.05 3.62
438 439 0.544697 GGCTTTCCTATCGGGGAACA 59.455 55.000 5.24 0.00 44.05 3.18
439 440 1.143073 GGCTTTCCTATCGGGGAACAT 59.857 52.381 5.24 0.00 44.05 2.71
440 441 2.370849 GGCTTTCCTATCGGGGAACATA 59.629 50.000 5.24 0.00 44.05 2.29
441 442 3.181448 GGCTTTCCTATCGGGGAACATAA 60.181 47.826 5.24 0.00 44.05 1.90
442 443 4.457466 GCTTTCCTATCGGGGAACATAAA 58.543 43.478 5.24 0.00 44.05 1.40
443 444 4.515567 GCTTTCCTATCGGGGAACATAAAG 59.484 45.833 5.24 0.00 44.05 1.85
444 445 5.681639 CTTTCCTATCGGGGAACATAAAGT 58.318 41.667 5.24 0.00 44.05 2.66
445 446 5.703730 TTCCTATCGGGGAACATAAAGTT 57.296 39.130 0.00 0.00 44.93 2.66
446 447 6.811634 TTCCTATCGGGGAACATAAAGTTA 57.188 37.500 0.00 0.00 41.51 2.24
447 448 6.165700 TCCTATCGGGGAACATAAAGTTAC 57.834 41.667 0.00 0.00 41.51 2.50
448 449 5.901276 TCCTATCGGGGAACATAAAGTTACT 59.099 40.000 0.00 0.00 41.10 2.24
449 450 7.068702 TCCTATCGGGGAACATAAAGTTACTA 58.931 38.462 0.00 0.00 41.10 1.82
450 451 7.731688 TCCTATCGGGGAACATAAAGTTACTAT 59.268 37.037 0.00 0.00 41.10 2.12
451 452 9.028284 CCTATCGGGGAACATAAAGTTACTATA 57.972 37.037 0.00 0.00 41.10 1.31
455 456 9.550406 TCGGGGAACATAAAGTTACTATATTTG 57.450 33.333 0.00 0.00 41.10 2.32
456 457 8.780249 CGGGGAACATAAAGTTACTATATTTGG 58.220 37.037 0.00 0.00 41.10 3.28
457 458 9.856162 GGGGAACATAAAGTTACTATATTTGGA 57.144 33.333 0.00 0.00 41.10 3.53
464 465 6.884280 AAGTTACTATATTTGGATGGCTGC 57.116 37.500 0.00 0.00 0.00 5.25
465 466 5.316987 AGTTACTATATTTGGATGGCTGCC 58.683 41.667 12.87 12.87 0.00 4.85
466 467 3.882102 ACTATATTTGGATGGCTGCCA 57.118 42.857 25.65 25.65 38.19 4.92
467 468 3.490348 ACTATATTTGGATGGCTGCCAC 58.510 45.455 25.99 17.22 35.80 5.01
468 469 1.321474 ATATTTGGATGGCTGCCACG 58.679 50.000 25.99 0.00 35.80 4.94
469 470 0.254462 TATTTGGATGGCTGCCACGA 59.746 50.000 25.99 9.48 35.80 4.35
470 471 0.611618 ATTTGGATGGCTGCCACGAA 60.612 50.000 25.99 18.13 35.80 3.85
471 472 0.825425 TTTGGATGGCTGCCACGAAA 60.825 50.000 25.99 21.61 35.80 3.46
472 473 1.523154 TTGGATGGCTGCCACGAAAC 61.523 55.000 25.99 12.71 35.80 2.78
473 474 2.480555 GATGGCTGCCACGAAACG 59.519 61.111 25.99 0.00 35.80 3.60
474 475 3.667429 GATGGCTGCCACGAAACGC 62.667 63.158 25.99 3.84 35.80 4.84
475 476 4.927782 TGGCTGCCACGAAACGCT 62.928 61.111 19.30 0.00 0.00 5.07
476 477 2.740826 GGCTGCCACGAAACGCTA 60.741 61.111 15.17 0.00 0.00 4.26
477 478 2.740714 GGCTGCCACGAAACGCTAG 61.741 63.158 15.17 0.00 0.00 3.42
478 479 2.740714 GCTGCCACGAAACGCTAGG 61.741 63.158 0.00 0.00 0.00 3.02
479 480 2.047655 TGCCACGAAACGCTAGGG 60.048 61.111 5.05 5.05 0.00 3.53
480 481 2.263540 GCCACGAAACGCTAGGGA 59.736 61.111 14.59 0.00 0.00 4.20
481 482 1.810030 GCCACGAAACGCTAGGGAG 60.810 63.158 14.59 4.54 0.00 4.30
482 483 1.810030 CCACGAAACGCTAGGGAGC 60.810 63.158 14.59 1.37 46.00 4.70
708 718 3.919216 ACTGATGAAGTCGAAAGGTCAG 58.081 45.455 11.99 11.99 31.64 3.51
735 745 3.825908 ATGGTAAGAAAAAGAGGGCCA 57.174 42.857 6.18 0.00 0.00 5.36
825 836 2.124942 CTCTTTCTCCGGCTGGCC 60.125 66.667 6.73 0.00 34.14 5.36
922 947 1.202952 ACGCACTATTCCCCACCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
927 952 4.073549 CACTATTCCCCACCAAAAACGTA 58.926 43.478 0.00 0.00 0.00 3.57
928 953 4.074259 ACTATTCCCCACCAAAAACGTAC 58.926 43.478 0.00 0.00 0.00 3.67
972 997 1.191096 GTTTGACAAGCACAAGCACG 58.809 50.000 0.00 0.00 45.49 5.34
991 1016 2.860628 CGCGCGCGCTCTATTTCTT 61.861 57.895 45.97 0.00 39.32 2.52
1660 1685 2.513435 GTAGGAGGCAGCAGCAGC 60.513 66.667 2.65 0.00 44.61 5.25
1661 1686 3.004946 TAGGAGGCAGCAGCAGCA 61.005 61.111 12.41 0.00 45.49 4.41
1662 1687 3.027675 TAGGAGGCAGCAGCAGCAG 62.028 63.158 12.41 0.00 45.49 4.24
1664 1689 4.405671 GAGGCAGCAGCAGCAGGA 62.406 66.667 12.41 0.00 45.49 3.86
1665 1690 4.411981 AGGCAGCAGCAGCAGGAG 62.412 66.667 12.41 0.00 45.49 3.69
1669 1694 3.400928 AGCAGCAGCAGGAGGAGG 61.401 66.667 3.17 0.00 45.49 4.30
1672 1697 1.685077 CAGCAGCAGGAGGAGGAGA 60.685 63.158 0.00 0.00 0.00 3.71
1806 1839 7.698550 GGAAAGTTCTTCTGTTCTTTTTCACTC 59.301 37.037 0.00 0.00 31.56 3.51
1849 1882 5.640783 CACTGTTGCTTCTCTGTCATATCAA 59.359 40.000 0.00 0.00 0.00 2.57
1916 1959 8.647143 ATTTCTTTTGGTTATTTGTCTGTGTG 57.353 30.769 0.00 0.00 0.00 3.82
1924 1967 7.492524 TGGTTATTTGTCTGTGTGCATTTTTA 58.507 30.769 0.00 0.00 0.00 1.52
1925 1968 7.981789 TGGTTATTTGTCTGTGTGCATTTTTAA 59.018 29.630 0.00 0.00 0.00 1.52
2025 2073 9.017509 TGTACTACGCTGTATTATAAGCCTTAT 57.982 33.333 2.01 2.01 35.98 1.73
2040 2116 4.122776 AGCCTTATTACTTCATCAGCACG 58.877 43.478 0.00 0.00 0.00 5.34
2072 2149 1.938861 TCGCAACCGAAGTGAAAGC 59.061 52.632 0.00 0.00 41.17 3.51
2091 2168 6.945435 TGAAAGCAGTTTCTATTGGATGGTTA 59.055 34.615 0.78 0.00 42.39 2.85
2217 2295 1.668419 GGACAGGTAATCGCATTGCT 58.332 50.000 7.12 0.00 0.00 3.91
2382 2460 7.645058 AGGAAAGAAACTTCAACATCTTGAA 57.355 32.000 0.00 0.00 42.93 2.69
2567 2645 2.662596 CTAACAGAGTGGCGGCCA 59.337 61.111 19.77 19.77 0.00 5.36
2581 2659 1.879380 GCGGCCATTAATATGAGCACA 59.121 47.619 2.24 0.00 33.37 4.57
2587 2665 6.144402 CGGCCATTAATATGAGCACAAAATTC 59.856 38.462 2.24 0.00 33.37 2.17
2594 2672 3.574284 TGAGCACAAAATTCATTCCGG 57.426 42.857 0.00 0.00 0.00 5.14
2596 2674 3.057596 TGAGCACAAAATTCATTCCGGAC 60.058 43.478 1.83 0.00 0.00 4.79
2625 2703 2.219674 GCTATCAGAAATTCGCAGTCGG 59.780 50.000 0.00 0.00 36.13 4.79
2653 2731 4.031611 AGAACAAGGTACTCCCTCCATAC 58.968 47.826 0.00 0.00 45.47 2.39
2662 2740 8.380742 AGGTACTCCCTCCATACAAATATATG 57.619 38.462 0.00 0.00 40.71 1.78
2664 2742 8.041323 GGTACTCCCTCCATACAAATATATGTG 58.959 40.741 0.99 0.99 34.75 3.21
2671 2749 9.241919 CCTCCATACAAATATATGTGGCATAAA 57.758 33.333 7.81 0.00 34.75 1.40
2674 2752 7.697710 CCATACAAATATATGTGGCATAAAGCG 59.302 37.037 7.81 0.00 38.27 4.68
2692 2770 2.365293 AGCGTTTTTGGAGATTGCCTTT 59.635 40.909 0.00 0.00 0.00 3.11
2693 2771 3.130633 GCGTTTTTGGAGATTGCCTTTT 58.869 40.909 0.00 0.00 0.00 2.27
2694 2772 3.559655 GCGTTTTTGGAGATTGCCTTTTT 59.440 39.130 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.686334 ACTAATGGTTGCCTTGAGTTATATTTG 58.314 33.333 0.00 0.00 0.00 2.32
1 2 8.823220 ACTAATGGTTGCCTTGAGTTATATTT 57.177 30.769 0.00 0.00 0.00 1.40
2 3 7.502561 GGACTAATGGTTGCCTTGAGTTATATT 59.497 37.037 0.00 0.00 0.00 1.28
3 4 6.998673 GGACTAATGGTTGCCTTGAGTTATAT 59.001 38.462 0.00 0.00 0.00 0.86
4 5 6.069905 TGGACTAATGGTTGCCTTGAGTTATA 60.070 38.462 0.00 0.00 0.00 0.98
5 6 5.193679 GGACTAATGGTTGCCTTGAGTTAT 58.806 41.667 0.00 0.00 0.00 1.89
6 7 4.042311 TGGACTAATGGTTGCCTTGAGTTA 59.958 41.667 0.00 0.00 0.00 2.24
7 8 3.181434 TGGACTAATGGTTGCCTTGAGTT 60.181 43.478 0.00 0.00 0.00 3.01
8 9 2.375174 TGGACTAATGGTTGCCTTGAGT 59.625 45.455 0.00 0.00 0.00 3.41
9 10 3.071874 TGGACTAATGGTTGCCTTGAG 57.928 47.619 0.00 0.00 0.00 3.02
10 11 3.737559 ATGGACTAATGGTTGCCTTGA 57.262 42.857 0.00 0.00 0.00 3.02
11 12 4.780815 TCTATGGACTAATGGTTGCCTTG 58.219 43.478 0.00 0.00 0.00 3.61
12 13 4.721776 TCTCTATGGACTAATGGTTGCCTT 59.278 41.667 0.00 0.00 0.00 4.35
13 14 4.298626 TCTCTATGGACTAATGGTTGCCT 58.701 43.478 0.00 0.00 0.00 4.75
14 15 4.689612 TCTCTATGGACTAATGGTTGCC 57.310 45.455 0.00 0.00 0.00 4.52
15 16 6.058183 ACAATCTCTATGGACTAATGGTTGC 58.942 40.000 0.00 0.00 0.00 4.17
16 17 7.275183 TGACAATCTCTATGGACTAATGGTTG 58.725 38.462 0.00 0.00 0.00 3.77
17 18 7.437713 TGACAATCTCTATGGACTAATGGTT 57.562 36.000 0.00 0.00 0.00 3.67
18 19 7.290948 TGATGACAATCTCTATGGACTAATGGT 59.709 37.037 0.00 0.00 33.61 3.55
19 20 7.674120 TGATGACAATCTCTATGGACTAATGG 58.326 38.462 0.00 0.00 33.61 3.16
20 21 9.722184 ATTGATGACAATCTCTATGGACTAATG 57.278 33.333 0.00 0.00 42.20 1.90
24 25 8.153550 GGTAATTGATGACAATCTCTATGGACT 58.846 37.037 0.00 0.00 44.67 3.85
25 26 7.933577 TGGTAATTGATGACAATCTCTATGGAC 59.066 37.037 0.00 0.00 44.67 4.02
26 27 8.033178 TGGTAATTGATGACAATCTCTATGGA 57.967 34.615 0.00 0.00 44.67 3.41
27 28 8.681486 TTGGTAATTGATGACAATCTCTATGG 57.319 34.615 0.00 0.00 44.67 2.74
30 31 8.956426 GGTTTTGGTAATTGATGACAATCTCTA 58.044 33.333 0.00 0.00 44.67 2.43
31 32 7.451255 TGGTTTTGGTAATTGATGACAATCTCT 59.549 33.333 0.00 0.00 44.67 3.10
32 33 7.601856 TGGTTTTGGTAATTGATGACAATCTC 58.398 34.615 0.00 0.00 44.67 2.75
33 34 7.537596 TGGTTTTGGTAATTGATGACAATCT 57.462 32.000 0.00 0.00 44.67 2.40
34 35 8.495148 GTTTGGTTTTGGTAATTGATGACAATC 58.505 33.333 0.00 0.00 44.67 2.67
35 36 7.989741 TGTTTGGTTTTGGTAATTGATGACAAT 59.010 29.630 0.00 0.00 46.99 2.71
36 37 7.331026 TGTTTGGTTTTGGTAATTGATGACAA 58.669 30.769 0.00 0.00 40.42 3.18
37 38 6.878317 TGTTTGGTTTTGGTAATTGATGACA 58.122 32.000 0.00 0.00 0.00 3.58
38 39 7.095271 CCATGTTTGGTTTTGGTAATTGATGAC 60.095 37.037 0.00 0.00 38.30 3.06
39 40 6.933521 CCATGTTTGGTTTTGGTAATTGATGA 59.066 34.615 0.00 0.00 38.30 2.92
40 41 6.149142 CCCATGTTTGGTTTTGGTAATTGATG 59.851 38.462 0.00 0.00 41.91 3.07
41 42 6.237154 CCCATGTTTGGTTTTGGTAATTGAT 58.763 36.000 0.00 0.00 41.91 2.57
42 43 5.455326 CCCCATGTTTGGTTTTGGTAATTGA 60.455 40.000 0.00 0.00 41.91 2.57
43 44 4.759183 CCCCATGTTTGGTTTTGGTAATTG 59.241 41.667 0.00 0.00 41.91 2.32
44 45 4.202514 CCCCCATGTTTGGTTTTGGTAATT 60.203 41.667 0.00 0.00 41.91 1.40
45 46 3.329225 CCCCCATGTTTGGTTTTGGTAAT 59.671 43.478 0.00 0.00 41.91 1.89
46 47 2.706190 CCCCCATGTTTGGTTTTGGTAA 59.294 45.455 0.00 0.00 41.91 2.85
47 48 2.330216 CCCCCATGTTTGGTTTTGGTA 58.670 47.619 0.00 0.00 41.91 3.25
48 49 1.135960 CCCCCATGTTTGGTTTTGGT 58.864 50.000 0.00 0.00 41.91 3.67
49 50 0.250684 GCCCCCATGTTTGGTTTTGG 60.251 55.000 0.00 0.00 41.91 3.28
50 51 0.602372 CGCCCCCATGTTTGGTTTTG 60.602 55.000 0.00 0.00 41.91 2.44
51 52 1.751563 CGCCCCCATGTTTGGTTTT 59.248 52.632 0.00 0.00 41.91 2.43
52 53 2.878089 GCGCCCCCATGTTTGGTTT 61.878 57.895 0.00 0.00 41.91 3.27
53 54 3.310307 GCGCCCCCATGTTTGGTT 61.310 61.111 0.00 0.00 41.91 3.67
65 66 3.683587 GAAAGAACATGCGGCGCCC 62.684 63.158 30.82 14.70 0.00 6.13
66 67 2.202479 GAAAGAACATGCGGCGCC 60.202 61.111 30.82 19.07 0.00 6.53
67 68 0.662970 TTTGAAAGAACATGCGGCGC 60.663 50.000 27.44 27.44 0.00 6.53
68 69 1.069296 TCTTTGAAAGAACATGCGGCG 60.069 47.619 4.94 0.51 33.83 6.46
69 70 2.589014 CTCTTTGAAAGAACATGCGGC 58.411 47.619 9.15 0.00 37.02 6.53
70 71 2.813754 TCCTCTTTGAAAGAACATGCGG 59.186 45.455 9.15 5.78 37.02 5.69
71 72 3.120060 CCTCCTCTTTGAAAGAACATGCG 60.120 47.826 9.15 0.00 37.02 4.73
72 73 3.192212 CCCTCCTCTTTGAAAGAACATGC 59.808 47.826 9.15 0.00 37.02 4.06
73 74 4.655963 TCCCTCCTCTTTGAAAGAACATG 58.344 43.478 9.15 0.00 37.02 3.21
74 75 5.222213 ACATCCCTCCTCTTTGAAAGAACAT 60.222 40.000 9.15 0.00 37.02 2.71
75 76 4.104738 ACATCCCTCCTCTTTGAAAGAACA 59.895 41.667 9.15 0.00 37.02 3.18
76 77 4.457257 CACATCCCTCCTCTTTGAAAGAAC 59.543 45.833 9.15 0.00 37.02 3.01
77 78 4.507335 CCACATCCCTCCTCTTTGAAAGAA 60.507 45.833 9.15 0.00 37.02 2.52
78 79 3.009473 CCACATCCCTCCTCTTTGAAAGA 59.991 47.826 7.49 7.49 35.87 2.52
79 80 3.009473 TCCACATCCCTCCTCTTTGAAAG 59.991 47.826 0.00 0.00 0.00 2.62
80 81 2.986019 TCCACATCCCTCCTCTTTGAAA 59.014 45.455 0.00 0.00 0.00 2.69
81 82 2.631384 TCCACATCCCTCCTCTTTGAA 58.369 47.619 0.00 0.00 0.00 2.69
82 83 2.342406 TCCACATCCCTCCTCTTTGA 57.658 50.000 0.00 0.00 0.00 2.69
83 84 2.307098 ACTTCCACATCCCTCCTCTTTG 59.693 50.000 0.00 0.00 0.00 2.77
84 85 2.307098 CACTTCCACATCCCTCCTCTTT 59.693 50.000 0.00 0.00 0.00 2.52
85 86 1.912043 CACTTCCACATCCCTCCTCTT 59.088 52.381 0.00 0.00 0.00 2.85
86 87 1.079490 TCACTTCCACATCCCTCCTCT 59.921 52.381 0.00 0.00 0.00 3.69
87 88 1.484240 CTCACTTCCACATCCCTCCTC 59.516 57.143 0.00 0.00 0.00 3.71
88 89 1.577736 CTCACTTCCACATCCCTCCT 58.422 55.000 0.00 0.00 0.00 3.69
89 90 0.107459 GCTCACTTCCACATCCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
90 91 0.908198 AGCTCACTTCCACATCCCTC 59.092 55.000 0.00 0.00 0.00 4.30
91 92 2.254152 TAGCTCACTTCCACATCCCT 57.746 50.000 0.00 0.00 0.00 4.20
92 93 3.350219 TTTAGCTCACTTCCACATCCC 57.650 47.619 0.00 0.00 0.00 3.85
93 94 4.775236 AGATTTAGCTCACTTCCACATCC 58.225 43.478 0.00 0.00 0.00 3.51
94 95 5.423015 TGAGATTTAGCTCACTTCCACATC 58.577 41.667 0.00 0.00 39.84 3.06
95 96 5.426689 TGAGATTTAGCTCACTTCCACAT 57.573 39.130 0.00 0.00 39.84 3.21
96 97 4.890158 TGAGATTTAGCTCACTTCCACA 57.110 40.909 0.00 0.00 39.84 4.17
104 105 5.880901 AGGAAAAAGGTGAGATTTAGCTCA 58.119 37.500 0.00 0.00 42.31 4.26
105 106 6.825944 AAGGAAAAAGGTGAGATTTAGCTC 57.174 37.500 0.00 0.00 35.46 4.09
106 107 6.517362 GCAAAGGAAAAAGGTGAGATTTAGCT 60.517 38.462 0.00 0.00 0.00 3.32
107 108 5.635280 GCAAAGGAAAAAGGTGAGATTTAGC 59.365 40.000 0.00 0.00 0.00 3.09
108 109 6.986250 AGCAAAGGAAAAAGGTGAGATTTAG 58.014 36.000 0.00 0.00 0.00 1.85
109 110 6.976934 AGCAAAGGAAAAAGGTGAGATTTA 57.023 33.333 0.00 0.00 0.00 1.40
110 111 5.876651 AGCAAAGGAAAAAGGTGAGATTT 57.123 34.783 0.00 0.00 0.00 2.17
111 112 5.876651 AAGCAAAGGAAAAAGGTGAGATT 57.123 34.783 0.00 0.00 0.00 2.40
112 113 5.876651 AAAGCAAAGGAAAAAGGTGAGAT 57.123 34.783 0.00 0.00 0.00 2.75
113 114 5.675684 AAAAGCAAAGGAAAAAGGTGAGA 57.324 34.783 0.00 0.00 0.00 3.27
146 147 2.489329 GCTTGTTTCAGATTGCCTAGCA 59.511 45.455 0.00 0.00 36.47 3.49
147 148 2.159324 GGCTTGTTTCAGATTGCCTAGC 60.159 50.000 0.00 0.00 37.58 3.42
148 149 2.424956 GGGCTTGTTTCAGATTGCCTAG 59.575 50.000 0.00 0.00 40.15 3.02
149 150 2.446435 GGGCTTGTTTCAGATTGCCTA 58.554 47.619 0.00 0.00 40.15 3.93
150 151 1.260544 GGGCTTGTTTCAGATTGCCT 58.739 50.000 0.00 0.00 40.15 4.75
151 152 0.247460 GGGGCTTGTTTCAGATTGCC 59.753 55.000 0.00 0.00 39.61 4.52
152 153 0.247460 GGGGGCTTGTTTCAGATTGC 59.753 55.000 0.00 0.00 0.00 3.56
153 154 1.928868 AGGGGGCTTGTTTCAGATTG 58.071 50.000 0.00 0.00 0.00 2.67
154 155 2.158325 TCAAGGGGGCTTGTTTCAGATT 60.158 45.455 0.00 0.00 35.91 2.40
155 156 1.428912 TCAAGGGGGCTTGTTTCAGAT 59.571 47.619 0.00 0.00 35.91 2.90
156 157 0.850100 TCAAGGGGGCTTGTTTCAGA 59.150 50.000 0.00 0.00 35.91 3.27
157 158 1.928868 ATCAAGGGGGCTTGTTTCAG 58.071 50.000 0.00 0.00 35.91 3.02
158 159 2.368221 CAAATCAAGGGGGCTTGTTTCA 59.632 45.455 0.00 0.00 35.91 2.69
159 160 2.871637 GCAAATCAAGGGGGCTTGTTTC 60.872 50.000 0.00 0.00 35.91 2.78
160 161 1.072173 GCAAATCAAGGGGGCTTGTTT 59.928 47.619 0.00 0.00 35.91 2.83
161 162 0.686789 GCAAATCAAGGGGGCTTGTT 59.313 50.000 0.00 0.00 35.91 2.83
162 163 1.194121 GGCAAATCAAGGGGGCTTGT 61.194 55.000 0.00 0.00 35.91 3.16
163 164 0.906282 AGGCAAATCAAGGGGGCTTG 60.906 55.000 0.00 0.00 31.46 4.01
164 165 0.709992 TAGGCAAATCAAGGGGGCTT 59.290 50.000 0.00 0.00 37.36 4.35
165 166 0.033109 GTAGGCAAATCAAGGGGGCT 60.033 55.000 0.00 0.00 39.64 5.19
166 167 0.324275 TGTAGGCAAATCAAGGGGGC 60.324 55.000 0.00 0.00 0.00 5.80
167 168 1.284785 TCTGTAGGCAAATCAAGGGGG 59.715 52.381 0.00 0.00 0.00 5.40
168 169 2.806945 TCTGTAGGCAAATCAAGGGG 57.193 50.000 0.00 0.00 0.00 4.79
169 170 3.955471 TCTTCTGTAGGCAAATCAAGGG 58.045 45.455 0.00 0.00 0.00 3.95
170 171 5.335976 GGTTTCTTCTGTAGGCAAATCAAGG 60.336 44.000 0.00 0.00 0.00 3.61
171 172 5.335976 GGGTTTCTTCTGTAGGCAAATCAAG 60.336 44.000 0.00 0.00 0.00 3.02
172 173 4.522789 GGGTTTCTTCTGTAGGCAAATCAA 59.477 41.667 0.00 0.00 0.00 2.57
173 174 4.079253 GGGTTTCTTCTGTAGGCAAATCA 58.921 43.478 0.00 0.00 0.00 2.57
174 175 4.336280 AGGGTTTCTTCTGTAGGCAAATC 58.664 43.478 0.00 0.00 0.00 2.17
175 176 4.388577 AGGGTTTCTTCTGTAGGCAAAT 57.611 40.909 0.00 0.00 0.00 2.32
176 177 3.876309 AGGGTTTCTTCTGTAGGCAAA 57.124 42.857 0.00 0.00 0.00 3.68
177 178 4.986054 TTAGGGTTTCTTCTGTAGGCAA 57.014 40.909 0.00 0.00 0.00 4.52
178 179 4.324254 CCATTAGGGTTTCTTCTGTAGGCA 60.324 45.833 0.00 0.00 0.00 4.75
179 180 4.080526 TCCATTAGGGTTTCTTCTGTAGGC 60.081 45.833 0.00 0.00 38.11 3.93
180 181 5.675538 CTCCATTAGGGTTTCTTCTGTAGG 58.324 45.833 0.00 0.00 38.11 3.18
181 182 5.119694 GCTCCATTAGGGTTTCTTCTGTAG 58.880 45.833 0.00 0.00 38.11 2.74
182 183 4.080526 GGCTCCATTAGGGTTTCTTCTGTA 60.081 45.833 0.00 0.00 38.11 2.74
183 184 3.308473 GGCTCCATTAGGGTTTCTTCTGT 60.308 47.826 0.00 0.00 38.11 3.41
184 185 3.282885 GGCTCCATTAGGGTTTCTTCTG 58.717 50.000 0.00 0.00 38.11 3.02
185 186 2.092914 CGGCTCCATTAGGGTTTCTTCT 60.093 50.000 0.00 0.00 38.11 2.85
186 187 2.289565 CGGCTCCATTAGGGTTTCTTC 58.710 52.381 0.00 0.00 38.11 2.87
187 188 1.682087 GCGGCTCCATTAGGGTTTCTT 60.682 52.381 0.00 0.00 38.11 2.52
188 189 0.107165 GCGGCTCCATTAGGGTTTCT 60.107 55.000 0.00 0.00 38.11 2.52
189 190 1.101635 GGCGGCTCCATTAGGGTTTC 61.102 60.000 0.00 0.00 38.11 2.78
190 191 1.076995 GGCGGCTCCATTAGGGTTT 60.077 57.895 0.00 0.00 38.11 3.27
191 192 2.305607 TGGCGGCTCCATTAGGGTT 61.306 57.895 11.43 0.00 40.72 4.11
192 193 2.690881 TGGCGGCTCCATTAGGGT 60.691 61.111 11.43 0.00 40.72 4.34
200 201 4.883354 CCCTCCAATGGCGGCTCC 62.883 72.222 11.43 0.00 0.00 4.70
201 202 3.645268 AACCCTCCAATGGCGGCTC 62.645 63.158 11.43 0.00 0.00 4.70
202 203 3.661648 AACCCTCCAATGGCGGCT 61.662 61.111 11.43 0.00 0.00 5.52
203 204 3.451894 CAACCCTCCAATGGCGGC 61.452 66.667 2.00 0.00 0.00 6.53
204 205 2.035626 ACAACCCTCCAATGGCGG 59.964 61.111 0.25 0.25 0.00 6.13
205 206 0.893270 TTCACAACCCTCCAATGGCG 60.893 55.000 0.00 0.00 0.00 5.69
206 207 0.890683 CTTCACAACCCTCCAATGGC 59.109 55.000 0.00 0.00 0.00 4.40
207 208 1.203050 ACCTTCACAACCCTCCAATGG 60.203 52.381 0.00 0.00 0.00 3.16
208 209 2.292828 ACCTTCACAACCCTCCAATG 57.707 50.000 0.00 0.00 0.00 2.82
209 210 3.328535 AAACCTTCACAACCCTCCAAT 57.671 42.857 0.00 0.00 0.00 3.16
210 211 2.763448 CAAAACCTTCACAACCCTCCAA 59.237 45.455 0.00 0.00 0.00 3.53
211 212 2.291930 ACAAAACCTTCACAACCCTCCA 60.292 45.455 0.00 0.00 0.00 3.86
212 213 2.100749 CACAAAACCTTCACAACCCTCC 59.899 50.000 0.00 0.00 0.00 4.30
213 214 2.100749 CCACAAAACCTTCACAACCCTC 59.899 50.000 0.00 0.00 0.00 4.30
214 215 2.107366 CCACAAAACCTTCACAACCCT 58.893 47.619 0.00 0.00 0.00 4.34
215 216 2.104170 TCCACAAAACCTTCACAACCC 58.896 47.619 0.00 0.00 0.00 4.11
216 217 3.636764 AGATCCACAAAACCTTCACAACC 59.363 43.478 0.00 0.00 0.00 3.77
217 218 4.499696 CCAGATCCACAAAACCTTCACAAC 60.500 45.833 0.00 0.00 0.00 3.32
218 219 3.636300 CCAGATCCACAAAACCTTCACAA 59.364 43.478 0.00 0.00 0.00 3.33
219 220 3.117701 TCCAGATCCACAAAACCTTCACA 60.118 43.478 0.00 0.00 0.00 3.58
220 221 3.486383 TCCAGATCCACAAAACCTTCAC 58.514 45.455 0.00 0.00 0.00 3.18
221 222 3.874383 TCCAGATCCACAAAACCTTCA 57.126 42.857 0.00 0.00 0.00 3.02
222 223 4.022849 CACTTCCAGATCCACAAAACCTTC 60.023 45.833 0.00 0.00 0.00 3.46
223 224 3.891366 CACTTCCAGATCCACAAAACCTT 59.109 43.478 0.00 0.00 0.00 3.50
224 225 3.490348 CACTTCCAGATCCACAAAACCT 58.510 45.455 0.00 0.00 0.00 3.50
225 226 2.558359 CCACTTCCAGATCCACAAAACC 59.442 50.000 0.00 0.00 0.00 3.27
226 227 2.029918 GCCACTTCCAGATCCACAAAAC 60.030 50.000 0.00 0.00 0.00 2.43
227 228 2.238521 GCCACTTCCAGATCCACAAAA 58.761 47.619 0.00 0.00 0.00 2.44
228 229 1.881925 CGCCACTTCCAGATCCACAAA 60.882 52.381 0.00 0.00 0.00 2.83
229 230 0.321564 CGCCACTTCCAGATCCACAA 60.322 55.000 0.00 0.00 0.00 3.33
230 231 1.191489 TCGCCACTTCCAGATCCACA 61.191 55.000 0.00 0.00 0.00 4.17
231 232 0.460987 CTCGCCACTTCCAGATCCAC 60.461 60.000 0.00 0.00 0.00 4.02
232 233 1.617018 CCTCGCCACTTCCAGATCCA 61.617 60.000 0.00 0.00 0.00 3.41
233 234 1.144936 CCTCGCCACTTCCAGATCC 59.855 63.158 0.00 0.00 0.00 3.36
234 235 1.144936 CCCTCGCCACTTCCAGATC 59.855 63.158 0.00 0.00 0.00 2.75
235 236 2.370445 CCCCTCGCCACTTCCAGAT 61.370 63.158 0.00 0.00 0.00 2.90
236 237 3.003173 CCCCTCGCCACTTCCAGA 61.003 66.667 0.00 0.00 0.00 3.86
237 238 2.527951 CTTCCCCTCGCCACTTCCAG 62.528 65.000 0.00 0.00 0.00 3.86
238 239 2.528127 TTCCCCTCGCCACTTCCA 60.528 61.111 0.00 0.00 0.00 3.53
239 240 2.269241 CTTCCCCTCGCCACTTCC 59.731 66.667 0.00 0.00 0.00 3.46
240 241 2.269241 CCTTCCCCTCGCCACTTC 59.731 66.667 0.00 0.00 0.00 3.01
241 242 3.330720 CCCTTCCCCTCGCCACTT 61.331 66.667 0.00 0.00 0.00 3.16
246 247 4.410400 CACACCCCTTCCCCTCGC 62.410 72.222 0.00 0.00 0.00 5.03
247 248 4.410400 GCACACCCCTTCCCCTCG 62.410 72.222 0.00 0.00 0.00 4.63
248 249 4.048470 GGCACACCCCTTCCCCTC 62.048 72.222 0.00 0.00 0.00 4.30
251 252 4.717313 GACGGCACACCCCTTCCC 62.717 72.222 0.00 0.00 0.00 3.97
252 253 4.717313 GGACGGCACACCCCTTCC 62.717 72.222 0.00 0.00 36.32 3.46
253 254 2.692273 AAAGGACGGCACACCCCTTC 62.692 60.000 0.00 0.00 36.79 3.46
254 255 2.292785 AAAAGGACGGCACACCCCTT 62.293 55.000 0.00 0.00 38.77 3.95
255 256 2.292785 AAAAAGGACGGCACACCCCT 62.293 55.000 0.00 0.00 0.00 4.79
256 257 1.830847 AAAAAGGACGGCACACCCC 60.831 57.895 0.00 0.00 0.00 4.95
257 258 1.362355 CAAAAAGGACGGCACACCC 59.638 57.895 0.00 0.00 0.00 4.61
258 259 1.362355 CCAAAAAGGACGGCACACC 59.638 57.895 0.00 0.00 41.22 4.16
259 260 1.299850 GCCAAAAAGGACGGCACAC 60.300 57.895 0.00 0.00 45.52 3.82
260 261 3.124686 GCCAAAAAGGACGGCACA 58.875 55.556 0.00 0.00 45.52 4.57
263 264 1.006220 CCAAGCCAAAAAGGACGGC 60.006 57.895 0.00 0.00 46.62 5.68
264 265 0.825840 TCCCAAGCCAAAAAGGACGG 60.826 55.000 0.00 0.00 41.22 4.79
265 266 0.598065 CTCCCAAGCCAAAAAGGACG 59.402 55.000 0.00 0.00 41.22 4.79
266 267 1.889170 CTCTCCCAAGCCAAAAAGGAC 59.111 52.381 0.00 0.00 41.22 3.85
267 268 1.780309 TCTCTCCCAAGCCAAAAAGGA 59.220 47.619 0.00 0.00 41.22 3.36
268 269 2.292828 TCTCTCCCAAGCCAAAAAGG 57.707 50.000 0.00 0.00 41.84 3.11
269 270 3.490348 TCTTCTCTCCCAAGCCAAAAAG 58.510 45.455 0.00 0.00 0.00 2.27
270 271 3.593442 TCTTCTCTCCCAAGCCAAAAA 57.407 42.857 0.00 0.00 0.00 1.94
271 272 3.490348 CTTCTTCTCTCCCAAGCCAAAA 58.510 45.455 0.00 0.00 0.00 2.44
272 273 2.224867 CCTTCTTCTCTCCCAAGCCAAA 60.225 50.000 0.00 0.00 0.00 3.28
273 274 1.352352 CCTTCTTCTCTCCCAAGCCAA 59.648 52.381 0.00 0.00 0.00 4.52
274 275 0.987294 CCTTCTTCTCTCCCAAGCCA 59.013 55.000 0.00 0.00 0.00 4.75
275 276 0.988063 ACCTTCTTCTCTCCCAAGCC 59.012 55.000 0.00 0.00 0.00 4.35
276 277 1.339535 CCACCTTCTTCTCTCCCAAGC 60.340 57.143 0.00 0.00 0.00 4.01
277 278 1.280421 CCCACCTTCTTCTCTCCCAAG 59.720 57.143 0.00 0.00 0.00 3.61
278 279 1.362224 CCCACCTTCTTCTCTCCCAA 58.638 55.000 0.00 0.00 0.00 4.12
279 280 0.547712 CCCCACCTTCTTCTCTCCCA 60.548 60.000 0.00 0.00 0.00 4.37
280 281 1.916206 GCCCCACCTTCTTCTCTCCC 61.916 65.000 0.00 0.00 0.00 4.30
281 282 0.912006 AGCCCCACCTTCTTCTCTCC 60.912 60.000 0.00 0.00 0.00 3.71
282 283 0.251634 CAGCCCCACCTTCTTCTCTC 59.748 60.000 0.00 0.00 0.00 3.20
283 284 1.204113 CCAGCCCCACCTTCTTCTCT 61.204 60.000 0.00 0.00 0.00 3.10
284 285 1.301293 CCAGCCCCACCTTCTTCTC 59.699 63.158 0.00 0.00 0.00 2.87
285 286 2.234296 CCCAGCCCCACCTTCTTCT 61.234 63.158 0.00 0.00 0.00 2.85
286 287 2.356667 CCCAGCCCCACCTTCTTC 59.643 66.667 0.00 0.00 0.00 2.87
287 288 3.268032 CCCCAGCCCCACCTTCTT 61.268 66.667 0.00 0.00 0.00 2.52
290 291 3.840612 TAACCCCCAGCCCCACCTT 62.841 63.158 0.00 0.00 0.00 3.50
291 292 4.295284 TAACCCCCAGCCCCACCT 62.295 66.667 0.00 0.00 0.00 4.00
292 293 3.739613 CTAACCCCCAGCCCCACC 61.740 72.222 0.00 0.00 0.00 4.61
293 294 3.739613 CCTAACCCCCAGCCCCAC 61.740 72.222 0.00 0.00 0.00 4.61
294 295 4.295284 ACCTAACCCCCAGCCCCA 62.295 66.667 0.00 0.00 0.00 4.96
295 296 3.739613 CACCTAACCCCCAGCCCC 61.740 72.222 0.00 0.00 0.00 5.80
296 297 2.612746 TCACCTAACCCCCAGCCC 60.613 66.667 0.00 0.00 0.00 5.19
297 298 2.680370 CCTCACCTAACCCCCAGCC 61.680 68.421 0.00 0.00 0.00 4.85
298 299 1.615424 TCCTCACCTAACCCCCAGC 60.615 63.158 0.00 0.00 0.00 4.85
299 300 0.042731 TCTCCTCACCTAACCCCCAG 59.957 60.000 0.00 0.00 0.00 4.45
300 301 0.494551 TTCTCCTCACCTAACCCCCA 59.505 55.000 0.00 0.00 0.00 4.96
301 302 1.665137 TTTCTCCTCACCTAACCCCC 58.335 55.000 0.00 0.00 0.00 5.40
302 303 2.026169 CCTTTTCTCCTCACCTAACCCC 60.026 54.545 0.00 0.00 0.00 4.95
303 304 2.910977 TCCTTTTCTCCTCACCTAACCC 59.089 50.000 0.00 0.00 0.00 4.11
304 305 3.838903 TCTCCTTTTCTCCTCACCTAACC 59.161 47.826 0.00 0.00 0.00 2.85
305 306 4.618693 CGTCTCCTTTTCTCCTCACCTAAC 60.619 50.000 0.00 0.00 0.00 2.34
306 307 3.510360 CGTCTCCTTTTCTCCTCACCTAA 59.490 47.826 0.00 0.00 0.00 2.69
307 308 3.090037 CGTCTCCTTTTCTCCTCACCTA 58.910 50.000 0.00 0.00 0.00 3.08
308 309 1.896465 CGTCTCCTTTTCTCCTCACCT 59.104 52.381 0.00 0.00 0.00 4.00
309 310 1.673329 GCGTCTCCTTTTCTCCTCACC 60.673 57.143 0.00 0.00 0.00 4.02
310 311 1.673329 GGCGTCTCCTTTTCTCCTCAC 60.673 57.143 0.00 0.00 0.00 3.51
311 312 0.608640 GGCGTCTCCTTTTCTCCTCA 59.391 55.000 0.00 0.00 0.00 3.86
312 313 0.108089 GGGCGTCTCCTTTTCTCCTC 60.108 60.000 0.00 0.00 34.39 3.71
313 314 0.836400 TGGGCGTCTCCTTTTCTCCT 60.836 55.000 0.00 0.00 34.39 3.69
314 315 0.391793 CTGGGCGTCTCCTTTTCTCC 60.392 60.000 0.00 0.00 34.39 3.71
315 316 0.391793 CCTGGGCGTCTCCTTTTCTC 60.392 60.000 0.00 0.00 34.39 2.87
316 317 1.679898 CCTGGGCGTCTCCTTTTCT 59.320 57.895 0.00 0.00 34.39 2.52
317 318 1.377333 CCCTGGGCGTCTCCTTTTC 60.377 63.158 0.00 0.00 34.39 2.29
318 319 2.757077 CCCTGGGCGTCTCCTTTT 59.243 61.111 0.00 0.00 34.39 2.27
319 320 3.330720 CCCCTGGGCGTCTCCTTT 61.331 66.667 7.39 0.00 34.39 3.11
320 321 4.658786 ACCCCTGGGCGTCTCCTT 62.659 66.667 7.39 0.00 39.32 3.36
350 351 4.364686 TGGTCCTCCCCTTCCCCC 62.365 72.222 0.00 0.00 0.00 5.40
351 352 2.692741 CTGGTCCTCCCCTTCCCC 60.693 72.222 0.00 0.00 0.00 4.81
352 353 2.692741 CCTGGTCCTCCCCTTCCC 60.693 72.222 0.00 0.00 0.00 3.97
353 354 2.125225 ACCTGGTCCTCCCCTTCC 59.875 66.667 0.00 0.00 0.00 3.46
354 355 1.229529 TCACCTGGTCCTCCCCTTC 60.230 63.158 0.00 0.00 0.00 3.46
355 356 1.229658 CTCACCTGGTCCTCCCCTT 60.230 63.158 0.00 0.00 0.00 3.95
356 357 2.049792 AACTCACCTGGTCCTCCCCT 62.050 60.000 0.00 0.00 0.00 4.79
357 358 1.134438 AAACTCACCTGGTCCTCCCC 61.134 60.000 0.00 0.00 0.00 4.81
358 359 0.036875 CAAACTCACCTGGTCCTCCC 59.963 60.000 0.00 0.00 0.00 4.30
359 360 0.606673 GCAAACTCACCTGGTCCTCC 60.607 60.000 0.00 0.00 0.00 4.30
360 361 0.606673 GGCAAACTCACCTGGTCCTC 60.607 60.000 0.00 0.00 0.00 3.71
361 362 1.456287 GGCAAACTCACCTGGTCCT 59.544 57.895 0.00 0.00 0.00 3.85
362 363 1.603739 GGGCAAACTCACCTGGTCC 60.604 63.158 0.00 0.00 0.00 4.46
363 364 1.966451 CGGGCAAACTCACCTGGTC 60.966 63.158 0.00 0.00 0.00 4.02
364 365 2.113139 CGGGCAAACTCACCTGGT 59.887 61.111 0.00 0.00 0.00 4.00
365 366 3.365265 GCGGGCAAACTCACCTGG 61.365 66.667 0.00 0.00 32.55 4.45
366 367 2.281761 AGCGGGCAAACTCACCTG 60.282 61.111 0.00 0.00 35.26 4.00
367 368 2.032681 GAGCGGGCAAACTCACCT 59.967 61.111 0.00 0.00 32.98 4.00
368 369 3.423154 CGAGCGGGCAAACTCACC 61.423 66.667 0.00 0.00 32.98 4.02
369 370 1.741770 ATCGAGCGGGCAAACTCAC 60.742 57.895 0.00 0.00 32.98 3.51
370 371 1.741401 CATCGAGCGGGCAAACTCA 60.741 57.895 0.00 0.00 32.98 3.41
371 372 2.464459 CCATCGAGCGGGCAAACTC 61.464 63.158 0.00 0.00 0.00 3.01
372 373 2.436646 CCATCGAGCGGGCAAACT 60.437 61.111 0.00 0.00 0.00 2.66
373 374 2.332654 AACCATCGAGCGGGCAAAC 61.333 57.895 8.43 0.00 0.00 2.93
374 375 2.033448 AACCATCGAGCGGGCAAA 59.967 55.556 8.43 0.00 0.00 3.68
375 376 2.745884 CAACCATCGAGCGGGCAA 60.746 61.111 8.43 0.00 0.00 4.52
376 377 4.776322 CCAACCATCGAGCGGGCA 62.776 66.667 8.43 0.00 0.00 5.36
377 378 4.467084 TCCAACCATCGAGCGGGC 62.467 66.667 8.43 0.00 0.00 6.13
378 379 2.511600 GTCCAACCATCGAGCGGG 60.512 66.667 8.43 4.03 0.00 6.13
379 380 2.885644 CGTCCAACCATCGAGCGG 60.886 66.667 2.16 2.16 0.00 5.52
380 381 3.554692 GCGTCCAACCATCGAGCG 61.555 66.667 0.00 0.00 0.00 5.03
381 382 3.554692 CGCGTCCAACCATCGAGC 61.555 66.667 0.00 0.00 0.00 5.03
382 383 2.885644 CCGCGTCCAACCATCGAG 60.886 66.667 4.92 0.00 0.00 4.04
383 384 4.444838 CCCGCGTCCAACCATCGA 62.445 66.667 4.92 0.00 0.00 3.59
384 385 3.943479 TTCCCGCGTCCAACCATCG 62.943 63.158 4.92 0.00 0.00 3.84
385 386 1.436983 GATTCCCGCGTCCAACCATC 61.437 60.000 4.92 0.00 0.00 3.51
386 387 1.451387 GATTCCCGCGTCCAACCAT 60.451 57.895 4.92 0.00 0.00 3.55
387 388 2.046700 GATTCCCGCGTCCAACCA 60.047 61.111 4.92 0.00 0.00 3.67
388 389 2.046700 TGATTCCCGCGTCCAACC 60.047 61.111 4.92 0.00 0.00 3.77
389 390 2.106683 CCTGATTCCCGCGTCCAAC 61.107 63.158 4.92 0.00 0.00 3.77
390 391 2.238847 CTCCTGATTCCCGCGTCCAA 62.239 60.000 4.92 0.00 0.00 3.53
391 392 2.682136 TCCTGATTCCCGCGTCCA 60.682 61.111 4.92 0.00 0.00 4.02
392 393 2.107141 CTCCTGATTCCCGCGTCC 59.893 66.667 4.92 0.00 0.00 4.79
393 394 2.107141 CCTCCTGATTCCCGCGTC 59.893 66.667 4.92 0.00 0.00 5.19
394 395 3.470888 CCCTCCTGATTCCCGCGT 61.471 66.667 4.92 0.00 0.00 6.01
395 396 4.241555 CCCCTCCTGATTCCCGCG 62.242 72.222 0.00 0.00 0.00 6.46
396 397 3.878667 CCCCCTCCTGATTCCCGC 61.879 72.222 0.00 0.00 0.00 6.13
397 398 2.040884 TCCCCCTCCTGATTCCCG 60.041 66.667 0.00 0.00 0.00 5.14
398 399 2.079288 GGTCCCCCTCCTGATTCCC 61.079 68.421 0.00 0.00 0.00 3.97
399 400 1.307866 TGGTCCCCCTCCTGATTCC 60.308 63.158 0.00 0.00 0.00 3.01
400 401 1.348775 CCTGGTCCCCCTCCTGATTC 61.349 65.000 0.00 0.00 0.00 2.52
401 402 1.308216 CCTGGTCCCCCTCCTGATT 60.308 63.158 0.00 0.00 0.00 2.57
402 403 2.374342 CCTGGTCCCCCTCCTGAT 59.626 66.667 0.00 0.00 0.00 2.90
403 404 4.024984 CCCTGGTCCCCCTCCTGA 62.025 72.222 0.00 0.00 0.00 3.86
407 408 2.941583 AAAGCCCTGGTCCCCCTC 60.942 66.667 0.00 0.00 0.00 4.30
408 409 2.941583 GAAAGCCCTGGTCCCCCT 60.942 66.667 0.00 0.00 0.00 4.79
409 410 4.062032 GGAAAGCCCTGGTCCCCC 62.062 72.222 0.00 0.00 0.00 5.40
410 411 2.941583 AGGAAAGCCCTGGTCCCC 60.942 66.667 0.00 0.00 45.61 4.81
429 430 9.550406 CAAATATAGTAACTTTATGTTCCCCGA 57.450 33.333 0.00 0.00 39.89 5.14
430 431 8.780249 CCAAATATAGTAACTTTATGTTCCCCG 58.220 37.037 0.00 0.00 39.89 5.73
431 432 9.856162 TCCAAATATAGTAACTTTATGTTCCCC 57.144 33.333 0.00 0.00 39.89 4.81
438 439 9.014297 GCAGCCATCCAAATATAGTAACTTTAT 57.986 33.333 0.00 0.00 0.00 1.40
439 440 7.447238 GGCAGCCATCCAAATATAGTAACTTTA 59.553 37.037 6.55 0.00 0.00 1.85
440 441 6.265422 GGCAGCCATCCAAATATAGTAACTTT 59.735 38.462 6.55 0.00 0.00 2.66
441 442 5.770162 GGCAGCCATCCAAATATAGTAACTT 59.230 40.000 6.55 0.00 0.00 2.66
442 443 5.163099 TGGCAGCCATCCAAATATAGTAACT 60.163 40.000 11.22 0.00 0.00 2.24
443 444 5.048713 GTGGCAGCCATCCAAATATAGTAAC 60.049 44.000 19.75 0.00 35.28 2.50
444 445 5.070001 GTGGCAGCCATCCAAATATAGTAA 58.930 41.667 19.75 0.00 35.28 2.24
445 446 4.651778 GTGGCAGCCATCCAAATATAGTA 58.348 43.478 19.75 0.00 35.28 1.82
446 447 3.490348 GTGGCAGCCATCCAAATATAGT 58.510 45.455 19.75 0.00 35.28 2.12
447 448 2.485426 CGTGGCAGCCATCCAAATATAG 59.515 50.000 19.75 0.00 35.28 1.31
448 449 2.105649 TCGTGGCAGCCATCCAAATATA 59.894 45.455 19.75 0.00 35.28 0.86
449 450 1.133823 TCGTGGCAGCCATCCAAATAT 60.134 47.619 19.75 0.00 35.28 1.28
450 451 0.254462 TCGTGGCAGCCATCCAAATA 59.746 50.000 19.75 0.00 35.28 1.40
451 452 0.611618 TTCGTGGCAGCCATCCAAAT 60.612 50.000 19.75 0.00 35.28 2.32
452 453 0.825425 TTTCGTGGCAGCCATCCAAA 60.825 50.000 19.75 13.77 35.28 3.28
453 454 1.228398 TTTCGTGGCAGCCATCCAA 60.228 52.632 19.75 8.01 35.28 3.53
454 455 1.971167 GTTTCGTGGCAGCCATCCA 60.971 57.895 19.75 0.99 35.28 3.41
455 456 2.877691 GTTTCGTGGCAGCCATCC 59.122 61.111 19.75 4.42 35.28 3.51
456 457 2.480555 CGTTTCGTGGCAGCCATC 59.519 61.111 19.75 10.62 35.28 3.51
457 458 2.796483 TAGCGTTTCGTGGCAGCCAT 62.796 55.000 19.75 0.44 35.28 4.40
458 459 3.523087 TAGCGTTTCGTGGCAGCCA 62.523 57.895 11.22 11.22 0.00 4.75
459 460 2.740714 CTAGCGTTTCGTGGCAGCC 61.741 63.158 3.66 3.66 0.00 4.85
460 461 2.740714 CCTAGCGTTTCGTGGCAGC 61.741 63.158 0.00 0.00 0.00 5.25
461 462 2.100631 CCCTAGCGTTTCGTGGCAG 61.101 63.158 0.00 0.00 0.00 4.85
462 463 2.047655 CCCTAGCGTTTCGTGGCA 60.048 61.111 0.00 0.00 0.00 4.92
463 464 1.810030 CTCCCTAGCGTTTCGTGGC 60.810 63.158 0.00 0.00 0.00 5.01
464 465 1.810030 GCTCCCTAGCGTTTCGTGG 60.810 63.158 0.00 0.00 39.39 4.94
465 466 3.782042 GCTCCCTAGCGTTTCGTG 58.218 61.111 0.00 0.00 39.39 4.35
474 475 2.551721 CCATGTATTGGCTGCTCCCTAG 60.552 54.545 0.00 0.00 39.09 3.02
475 476 1.421268 CCATGTATTGGCTGCTCCCTA 59.579 52.381 0.00 0.00 39.09 3.53
476 477 0.184451 CCATGTATTGGCTGCTCCCT 59.816 55.000 0.00 0.00 39.09 4.20
477 478 0.183492 TCCATGTATTGGCTGCTCCC 59.817 55.000 0.00 0.00 46.01 4.30
478 479 1.312815 GTCCATGTATTGGCTGCTCC 58.687 55.000 0.00 0.00 46.01 4.70
479 480 2.042686 TGTCCATGTATTGGCTGCTC 57.957 50.000 0.00 0.00 46.01 4.26
480 481 2.512692 TTGTCCATGTATTGGCTGCT 57.487 45.000 0.00 0.00 46.01 4.24
481 482 4.916983 TTATTGTCCATGTATTGGCTGC 57.083 40.909 0.00 0.00 46.01 5.25
482 483 8.114331 ACATATTATTGTCCATGTATTGGCTG 57.886 34.615 0.00 0.00 46.01 4.85
483 484 8.579006 CAACATATTATTGTCCATGTATTGGCT 58.421 33.333 0.00 0.00 46.01 4.75
484 485 8.575589 TCAACATATTATTGTCCATGTATTGGC 58.424 33.333 0.00 0.00 46.01 4.52
516 517 7.495135 ACAAAAATTCAACCAATGCCTTAAG 57.505 32.000 0.00 0.00 0.00 1.85
526 527 9.703892 CACCATATCTTTACAAAAATTCAACCA 57.296 29.630 0.00 0.00 0.00 3.67
574 575 8.279695 TCATCATGTGTTTAAAACAATGTTCG 57.720 30.769 0.00 0.00 44.16 3.95
708 718 7.764443 GGCCCTCTTTTTCTTACCATTTTTATC 59.236 37.037 0.00 0.00 0.00 1.75
730 740 3.966026 CTCGTCGACTCGTTGGCCC 62.966 68.421 14.70 0.00 0.00 5.80
735 745 2.858868 CGGTCTCGTCGACTCGTT 59.141 61.111 14.70 0.00 42.44 3.85
757 768 6.774354 TCCTTTCGTTGGCGTTATATATTC 57.226 37.500 0.00 0.00 39.49 1.75
922 947 2.066262 CAAGGCTGACGATTGTACGTT 58.934 47.619 0.00 0.00 46.52 3.99
927 952 2.034879 CGCCAAGGCTGACGATTGT 61.035 57.895 9.73 0.00 39.32 2.71
928 953 2.034879 ACGCCAAGGCTGACGATTG 61.035 57.895 9.73 0.00 39.32 2.67
991 1016 0.375454 CGGAATTCCATTGCGCGTAA 59.625 50.000 24.09 13.11 46.40 3.18
1467 1492 1.442184 CGTGAACGTCGTCCTGGAG 60.442 63.158 0.00 0.00 34.11 3.86
1660 1685 0.977108 AGCTGCTTCTCCTCCTCCTG 60.977 60.000 0.00 0.00 0.00 3.86
1661 1686 0.252650 AAGCTGCTTCTCCTCCTCCT 60.253 55.000 9.53 0.00 0.00 3.69
1662 1687 0.177836 GAAGCTGCTTCTCCTCCTCC 59.822 60.000 29.91 5.74 37.49 4.30
1663 1688 0.901124 TGAAGCTGCTTCTCCTCCTC 59.099 55.000 34.44 14.03 40.73 3.71
1664 1689 0.903942 CTGAAGCTGCTTCTCCTCCT 59.096 55.000 34.44 4.94 40.73 3.69
1665 1690 0.107752 CCTGAAGCTGCTTCTCCTCC 60.108 60.000 34.44 15.05 40.73 4.30
1692 1717 1.367599 GCTACTGCTGCTGCTCTTGG 61.368 60.000 17.00 4.21 40.48 3.61
1806 1839 4.815308 CAGTGATCAGCCCAATTAGAAGAG 59.185 45.833 0.00 0.00 0.00 2.85
1849 1882 3.654321 TCCTACCAGGAATGATCATGCAT 59.346 43.478 15.82 5.39 42.51 3.96
1941 1987 6.859508 CGTACTGTACATTGTGTAGAAAGTGA 59.140 38.462 17.35 0.00 32.84 3.41
1946 1992 5.158494 CAGCGTACTGTACATTGTGTAGAA 58.842 41.667 17.35 0.00 39.22 2.10
1991 2039 1.271656 ACAGCGTAGTACACCAACTCC 59.728 52.381 0.38 0.00 0.00 3.85
2025 2073 2.741759 TGAGCGTGCTGATGAAGTAA 57.258 45.000 0.00 0.00 0.00 2.24
2027 2075 2.005451 GAATGAGCGTGCTGATGAAGT 58.995 47.619 0.00 0.00 0.00 3.01
2029 2077 2.004733 CAGAATGAGCGTGCTGATGAA 58.995 47.619 0.00 0.00 39.69 2.57
2064 2140 5.416952 CCATCCAATAGAAACTGCTTTCACT 59.583 40.000 1.77 0.00 38.67 3.41
2072 2149 8.872845 GCAAAATTAACCATCCAATAGAAACTG 58.127 33.333 0.00 0.00 0.00 3.16
2091 2168 5.365403 TCTGATTCGGTAAACGCAAAATT 57.635 34.783 0.00 0.00 43.86 1.82
2217 2295 1.674359 AACAGATGCGGACACAACAA 58.326 45.000 0.00 0.00 0.00 2.83
2382 2460 2.636830 AGCTGCGAATAGTGCAAGATT 58.363 42.857 0.00 0.00 42.70 2.40
2567 2645 9.467258 CGGAATGAATTTTGTGCTCATATTAAT 57.533 29.630 0.00 0.00 0.00 1.40
2581 2659 5.772521 CACTTTCTGTCCGGAATGAATTTT 58.227 37.500 5.23 0.00 0.00 1.82
2587 2665 1.813513 AGCACTTTCTGTCCGGAATG 58.186 50.000 5.23 1.33 0.00 2.67
2594 2672 6.473521 CGAATTTCTGATAGCACTTTCTGTC 58.526 40.000 0.00 0.00 0.00 3.51
2596 2674 5.163824 TGCGAATTTCTGATAGCACTTTCTG 60.164 40.000 0.00 0.00 0.00 3.02
2625 2703 3.542648 GGGAGTACCTTGTTCTTATGGC 58.457 50.000 0.00 0.00 35.85 4.40
2653 2731 7.928908 AAACGCTTTATGCCACATATATTTG 57.071 32.000 0.00 0.00 38.78 2.32
2662 2740 2.986479 CTCCAAAAACGCTTTATGCCAC 59.014 45.455 0.00 0.00 38.78 5.01
2664 2742 3.569250 TCTCCAAAAACGCTTTATGCC 57.431 42.857 0.00 0.00 38.78 4.40
2671 2749 1.620822 AGGCAATCTCCAAAAACGCT 58.379 45.000 0.00 0.00 0.00 5.07
2672 2750 2.438868 AAGGCAATCTCCAAAAACGC 57.561 45.000 0.00 0.00 0.00 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.