Multiple sequence alignment - TraesCS3D01G223300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G223300 chr3D 100.000 9157 0 0 1 9157 304336056 304326900 0.000000e+00 16910.0
1 TraesCS3D01G223300 chr3A 89.502 3734 166 76 4834 8428 430334176 430337822 0.000000e+00 4516.0
2 TraesCS3D01G223300 chr3A 90.394 2665 165 32 1 2611 430329557 430332184 0.000000e+00 3419.0
3 TraesCS3D01G223300 chr3A 88.556 2001 86 47 2941 4847 430332190 430334141 0.000000e+00 2294.0
4 TraesCS3D01G223300 chr3A 84.262 413 51 14 8429 8834 706405112 706405517 3.100000e-104 390.0
5 TraesCS3D01G223300 chr3A 85.000 160 11 6 1897 2050 430331863 430332015 5.730000e-32 150.0
6 TraesCS3D01G223300 chr3A 87.692 65 8 0 4 68 579238602 579238538 9.860000e-10 76.8
7 TraesCS3D01G223300 chr3B 89.649 2647 167 44 1 2611 417257571 417260146 0.000000e+00 3271.0
8 TraesCS3D01G223300 chr3B 87.807 2887 122 80 3662 6413 417260880 417263671 0.000000e+00 3169.0
9 TraesCS3D01G223300 chr3B 93.451 1191 46 16 7264 8425 417264681 417265868 0.000000e+00 1738.0
10 TraesCS3D01G223300 chr3B 91.935 806 32 10 6441 7233 417263671 417264456 0.000000e+00 1098.0
11 TraesCS3D01G223300 chr3B 87.254 761 37 28 2915 3646 417260166 417260895 0.000000e+00 813.0
12 TraesCS3D01G223300 chr3B 90.510 569 49 5 8429 8995 723266532 723267097 0.000000e+00 747.0
13 TraesCS3D01G223300 chr3B 83.019 159 15 7 1897 2050 417259823 417259974 5.770000e-27 134.0
14 TraesCS3D01G223300 chr5D 93.861 733 42 2 8428 9157 566068225 566067493 0.000000e+00 1101.0
15 TraesCS3D01G223300 chr5A 92.098 734 44 8 8428 9157 544253074 544252351 0.000000e+00 1022.0
16 TraesCS3D01G223300 chr6D 89.726 730 43 14 8429 9156 51360762 51360063 0.000000e+00 904.0
17 TraesCS3D01G223300 chr6D 82.623 305 27 5 2618 2921 429084332 429084053 7.100000e-61 246.0
18 TraesCS3D01G223300 chr6D 81.250 112 17 3 70 178 451185843 451185953 4.550000e-13 87.9
19 TraesCS3D01G223300 chr2A 88.661 732 48 8 8428 9157 723064017 723064715 0.000000e+00 859.0
20 TraesCS3D01G223300 chr2A 80.984 305 31 8 2619 2921 513261486 513261765 5.570000e-52 217.0
21 TraesCS3D01G223300 chr2A 81.818 143 18 8 70 207 433380876 433381015 7.510000e-21 113.0
22 TraesCS3D01G223300 chr2A 94.030 67 4 0 2 68 501609182 501609116 1.630000e-17 102.0
23 TraesCS3D01G223300 chr4B 87.009 739 75 19 8429 9157 55721434 55720707 0.000000e+00 813.0
24 TraesCS3D01G223300 chr4B 81.150 313 50 4 2618 2921 453261638 453261950 9.190000e-60 243.0
25 TraesCS3D01G223300 chr4B 81.967 305 27 9 2620 2921 596782515 596782236 5.530000e-57 233.0
26 TraesCS3D01G223300 chr4B 90.090 111 10 1 2813 2922 387376454 387376344 9.580000e-30 143.0
27 TraesCS3D01G223300 chr1D 88.401 569 61 5 8429 8995 413211558 413210993 0.000000e+00 680.0
28 TraesCS3D01G223300 chr1D 86.667 90 9 1 9045 9134 413201690 413201604 7.570000e-16 97.1
29 TraesCS3D01G223300 chr1D 94.872 39 2 0 8999 9037 413201794 413201756 2.760000e-05 62.1
30 TraesCS3D01G223300 chr1D 100.000 29 0 0 9129 9157 413201590 413201562 5.000000e-03 54.7
31 TraesCS3D01G223300 chr6A 84.541 414 49 15 8429 8834 7007381 7007787 6.660000e-106 396.0
32 TraesCS3D01G223300 chr6A 89.706 204 19 2 2610 2811 532930010 532929807 9.120000e-65 259.0
33 TraesCS3D01G223300 chr7A 82.493 337 40 15 8837 9157 680395711 680395378 2.520000e-70 278.0
34 TraesCS3D01G223300 chr7A 91.327 196 15 2 2618 2811 126476632 126476827 5.450000e-67 267.0
35 TraesCS3D01G223300 chr7A 82.323 198 28 4 94 290 706991793 706991984 2.050000e-36 165.0
36 TraesCS3D01G223300 chr7A 88.550 131 13 2 6937 7066 649060208 649060079 3.420000e-34 158.0
37 TraesCS3D01G223300 chr7A 79.736 227 33 8 70 293 203902952 203903168 1.590000e-32 152.0
38 TraesCS3D01G223300 chr7A 87.705 122 15 0 6945 7066 649151612 649151491 9.580000e-30 143.0
39 TraesCS3D01G223300 chr7A 92.708 96 7 0 7398 7493 649185786 649185691 1.240000e-28 139.0
40 TraesCS3D01G223300 chr7A 75.081 309 55 15 7398 7697 649060057 649059762 3.470000e-24 124.0
41 TraesCS3D01G223300 chr7A 96.053 76 2 1 4699 4774 649074375 649074301 1.250000e-23 122.0
42 TraesCS3D01G223300 chr7A 91.176 68 6 0 1 68 3912651 3912584 9.790000e-15 93.5
43 TraesCS3D01G223300 chr7A 93.103 58 3 1 4714 4770 649154027 649153970 5.890000e-12 84.2
44 TraesCS3D01G223300 chr7A 87.931 58 1 4 5424 5480 649073758 649073706 7.680000e-06 63.9
45 TraesCS3D01G223300 chr7D 84.314 306 22 10 2617 2921 49806593 49806873 9.060000e-70 276.0
46 TraesCS3D01G223300 chr7D 90.863 197 16 2 2617 2812 385033067 385032872 7.050000e-66 263.0
47 TraesCS3D01G223300 chr7D 90.863 197 16 2 2617 2811 523191633 523191437 7.050000e-66 263.0
48 TraesCS3D01G223300 chr7D 93.548 124 8 0 6943 7066 563527498 563527375 1.570000e-42 185.0
49 TraesCS3D01G223300 chr7D 79.646 226 35 8 70 292 504519267 504519484 1.590000e-32 152.0
50 TraesCS3D01G223300 chr7D 76.623 308 52 16 7398 7699 563479928 563479635 1.590000e-32 152.0
51 TraesCS3D01G223300 chr7D 92.632 95 7 0 7398 7492 563663756 563663662 4.460000e-28 137.0
52 TraesCS3D01G223300 chr7D 95.652 69 3 0 4699 4767 563529146 563529078 2.700000e-20 111.0
53 TraesCS3D01G223300 chr7D 90.164 61 6 0 7164 7224 563663810 563663750 7.620000e-11 80.5
54 TraesCS3D01G223300 chr7D 81.633 98 12 3 5709 5803 563480771 563480677 9.860000e-10 76.8
55 TraesCS3D01G223300 chr7D 75.843 178 21 13 5321 5481 563528643 563528471 4.590000e-08 71.3
56 TraesCS3D01G223300 chr1A 83.934 305 23 10 2618 2921 11648233 11647954 1.520000e-67 268.0
57 TraesCS3D01G223300 chr1A 85.437 103 13 1 73 173 549140969 549140867 1.260000e-18 106.0
58 TraesCS3D01G223300 chr2B 83.713 307 24 10 2617 2921 526759769 526759487 5.450000e-67 267.0
59 TraesCS3D01G223300 chr6B 88.942 208 21 2 2606 2811 83141499 83141292 1.180000e-63 255.0
60 TraesCS3D01G223300 chr6B 80.500 200 36 3 93 292 35642961 35642765 5.730000e-32 150.0
61 TraesCS3D01G223300 chrUn 80.969 289 28 7 2635 2921 307770160 307769897 4.330000e-48 204.0
62 TraesCS3D01G223300 chrUn 80.623 289 29 7 2635 2921 285029142 285028879 2.020000e-46 198.0
63 TraesCS3D01G223300 chrUn 80.479 292 30 7 2632 2921 293565553 293565819 2.020000e-46 198.0
64 TraesCS3D01G223300 chrUn 80.479 292 30 7 2632 2921 315391787 315392053 2.020000e-46 198.0
65 TraesCS3D01G223300 chr7B 83.673 196 27 5 70 262 532447570 532447763 7.310000e-41 180.0
66 TraesCS3D01G223300 chr7B 76.547 307 48 17 7398 7697 613177138 613176849 7.410000e-31 147.0
67 TraesCS3D01G223300 chr7B 93.750 96 6 0 7398 7493 613254187 613254092 2.660000e-30 145.0
68 TraesCS3D01G223300 chr7B 95.652 69 3 0 4699 4767 613178956 613178888 2.700000e-20 111.0
69 TraesCS3D01G223300 chr7B 88.333 60 4 3 5424 5481 613178345 613178287 1.650000e-07 69.4
70 TraesCS3D01G223300 chr2D 81.333 150 19 8 65 207 327861674 327861821 7.510000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G223300 chr3D 304326900 304336056 9156 True 16910.000000 16910 100.0000 1 9157 1 chr3D.!!$R1 9156
1 TraesCS3D01G223300 chr3A 430329557 430337822 8265 False 2594.750000 4516 88.3630 1 8428 4 chr3A.!!$F2 8427
2 TraesCS3D01G223300 chr3B 417257571 417265868 8297 False 1703.833333 3271 88.8525 1 8425 6 chr3B.!!$F2 8424
3 TraesCS3D01G223300 chr3B 723266532 723267097 565 False 747.000000 747 90.5100 8429 8995 1 chr3B.!!$F1 566
4 TraesCS3D01G223300 chr5D 566067493 566068225 732 True 1101.000000 1101 93.8610 8428 9157 1 chr5D.!!$R1 729
5 TraesCS3D01G223300 chr5A 544252351 544253074 723 True 1022.000000 1022 92.0980 8428 9157 1 chr5A.!!$R1 729
6 TraesCS3D01G223300 chr6D 51360063 51360762 699 True 904.000000 904 89.7260 8429 9156 1 chr6D.!!$R1 727
7 TraesCS3D01G223300 chr2A 723064017 723064715 698 False 859.000000 859 88.6610 8428 9157 1 chr2A.!!$F3 729
8 TraesCS3D01G223300 chr4B 55720707 55721434 727 True 813.000000 813 87.0090 8429 9157 1 chr4B.!!$R1 728
9 TraesCS3D01G223300 chr1D 413210993 413211558 565 True 680.000000 680 88.4010 8429 8995 1 chr1D.!!$R1 566

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
468 480 0.454452 GATCAAAACCGCTTCCACGC 60.454 55.0 0.00 0.00 0.00 5.34 F
1226 1257 0.108520 CACCCGCATTGGTACGTACT 60.109 55.0 24.07 2.78 36.67 2.73 F
2711 2802 0.106619 CCCTACCTCTACGAGCACCT 60.107 60.0 0.00 0.00 0.00 4.00 F
3645 3780 0.037303 CACCTTCACCTCATGCACCT 59.963 55.0 0.00 0.00 0.00 4.00 F
4644 4866 0.096976 GTGAGTGTGTGTGTGTGTGC 59.903 55.0 0.00 0.00 0.00 4.57 F
5184 5474 0.099436 CTGCCGCTTGTCCTAATTGC 59.901 55.0 0.00 0.00 0.00 3.56 F
6944 7411 0.257328 TGGTGGTGGTGATTGTGTGT 59.743 50.0 0.00 0.00 0.00 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2424 2511 1.186200 GGGAAAATGGGAAGCTGACC 58.814 55.0 0.00 0.0 0.00 4.02 R
2881 2972 0.039618 TTCCCAGCCCATCAGGTTTC 59.960 55.0 0.00 0.0 38.26 2.78 R
4532 4734 0.030638 AGAGCGTGCGCAAACAAATT 59.969 45.0 14.00 0.0 44.88 1.82 R
5290 5597 0.179000 CTTGAGATTGCCTACCGCCT 59.821 55.0 0.00 0.0 36.24 5.52 R
6574 7004 0.038744 AGAAGGAACCGGAGACCGTA 59.961 55.0 9.46 0.0 46.80 4.02 R
7138 7612 0.260230 TGACAAAAGAAGGGTGGGCA 59.740 50.0 0.00 0.0 0.00 5.36 R
8292 8993 0.392193 GTGCCAGACACCAGATGGAG 60.392 60.0 5.72 0.0 44.02 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.217200 TCTTATTAAGACAATCTCCAATCCGG 58.783 38.462 0.00 0.00 31.20 5.14
34 35 2.700897 AGACAATCTCCAATCCGGTAGG 59.299 50.000 0.00 1.82 39.46 3.18
45 46 2.438800 TCCGGTAGGAGAGAAGAAGG 57.561 55.000 0.00 0.00 42.75 3.46
56 57 2.909662 AGAGAAGAAGGCTAGGTTTGCT 59.090 45.455 0.00 0.00 0.00 3.91
87 90 8.454106 CACAAGACTTTACCCAATTTCATAGAG 58.546 37.037 0.00 0.00 0.00 2.43
92 95 8.888579 ACTTTACCCAATTTCATAGAGATACG 57.111 34.615 0.00 0.00 0.00 3.06
98 101 7.442364 ACCCAATTTCATAGAGATACGTGATTG 59.558 37.037 0.00 0.00 0.00 2.67
120 123 1.502231 CAACTCACGTCCAACTCCAG 58.498 55.000 0.00 0.00 0.00 3.86
124 127 3.162666 ACTCACGTCCAACTCCAGAATA 58.837 45.455 0.00 0.00 0.00 1.75
126 129 4.223032 ACTCACGTCCAACTCCAGAATAAT 59.777 41.667 0.00 0.00 0.00 1.28
145 148 2.064434 TTTGGTTGAGCACATGTGGA 57.936 45.000 26.55 0.00 0.00 4.02
161 164 1.966451 GGACTCACCTTGGCAACCG 60.966 63.158 0.00 0.00 35.41 4.44
169 172 0.947244 CCTTGGCAACCGATAGATGC 59.053 55.000 0.00 0.00 44.53 3.91
172 175 1.882912 TGGCAACCGATAGATGCATC 58.117 50.000 19.37 19.37 46.23 3.91
186 189 3.691609 AGATGCATCGGTTCCTTTTCTTC 59.308 43.478 20.67 0.00 0.00 2.87
197 200 7.014808 TCGGTTCCTTTTCTTCCAATGTATTTT 59.985 33.333 0.00 0.00 0.00 1.82
293 296 5.302360 ACTACGTGATGTATTTGGTTGTGT 58.698 37.500 0.00 0.00 31.20 3.72
336 340 7.436430 TGCATGAAAATGTTGTGCATATTTT 57.564 28.000 0.00 11.28 40.51 1.82
366 370 4.418328 CCGGGCGGACCAAATGGA 62.418 66.667 6.42 0.00 40.22 3.41
370 374 0.682855 GGGCGGACCAAATGGATCAA 60.683 55.000 6.42 0.00 39.85 2.57
372 376 0.455815 GCGGACCAAATGGATCAACC 59.544 55.000 6.42 1.26 38.94 3.77
386 390 1.133253 CAACCGATTGAGCGCACTG 59.867 57.895 11.47 0.00 38.15 3.66
399 404 1.193665 CGCACTGCACACGAAAACAC 61.194 55.000 1.11 0.00 0.00 3.32
401 406 1.813896 CACTGCACACGAAAACACAG 58.186 50.000 0.00 0.00 0.00 3.66
402 407 0.732571 ACTGCACACGAAAACACAGG 59.267 50.000 0.00 0.00 0.00 4.00
405 410 1.654137 CACACGAAAACACAGGCGC 60.654 57.895 0.00 0.00 0.00 6.53
428 433 2.047179 GACACCGCCTCCTTGACC 60.047 66.667 0.00 0.00 0.00 4.02
431 436 2.683933 ACCGCCTCCTTGACCGAT 60.684 61.111 0.00 0.00 0.00 4.18
432 437 2.291043 ACCGCCTCCTTGACCGATT 61.291 57.895 0.00 0.00 0.00 3.34
436 441 1.821216 GCCTCCTTGACCGATTCAAA 58.179 50.000 1.73 0.00 43.90 2.69
437 442 1.468914 GCCTCCTTGACCGATTCAAAC 59.531 52.381 1.73 0.00 43.90 2.93
456 461 9.757227 ATTCAAACGGACAAAATAAGATCAAAA 57.243 25.926 0.00 0.00 0.00 2.44
461 466 5.619086 CGGACAAAATAAGATCAAAACCGCT 60.619 40.000 0.00 0.00 0.00 5.52
465 470 5.975693 AAATAAGATCAAAACCGCTTCCA 57.024 34.783 0.00 0.00 0.00 3.53
468 480 0.454452 GATCAAAACCGCTTCCACGC 60.454 55.000 0.00 0.00 0.00 5.34
470 482 3.292159 AAAACCGCTTCCACGCCC 61.292 61.111 0.00 0.00 0.00 6.13
481 493 3.353836 CACGCCCCGTTGGAGTTG 61.354 66.667 0.00 0.00 46.05 3.16
492 504 2.093447 CGTTGGAGTTGGCCTTATCTCT 60.093 50.000 3.32 0.00 0.00 3.10
495 507 1.418264 GGAGTTGGCCTTATCTCTCCC 59.582 57.143 3.32 0.00 36.46 4.30
498 510 3.193782 AGTTGGCCTTATCTCTCCCTTT 58.806 45.455 3.32 0.00 0.00 3.11
499 511 3.054065 AGTTGGCCTTATCTCTCCCTTTG 60.054 47.826 3.32 0.00 0.00 2.77
501 513 2.919602 TGGCCTTATCTCTCCCTTTGTT 59.080 45.455 3.32 0.00 0.00 2.83
502 514 3.282885 GGCCTTATCTCTCCCTTTGTTG 58.717 50.000 0.00 0.00 0.00 3.33
503 515 3.054361 GGCCTTATCTCTCCCTTTGTTGA 60.054 47.826 0.00 0.00 0.00 3.18
504 516 3.942115 GCCTTATCTCTCCCTTTGTTGAC 59.058 47.826 0.00 0.00 0.00 3.18
505 517 4.184629 CCTTATCTCTCCCTTTGTTGACG 58.815 47.826 0.00 0.00 0.00 4.35
506 518 4.322801 CCTTATCTCTCCCTTTGTTGACGT 60.323 45.833 0.00 0.00 0.00 4.34
508 520 3.936372 TCTCTCCCTTTGTTGACGTAG 57.064 47.619 0.00 0.00 0.00 3.51
509 521 3.493334 TCTCTCCCTTTGTTGACGTAGA 58.507 45.455 0.00 0.00 0.00 2.59
511 523 4.022242 TCTCTCCCTTTGTTGACGTAGAAG 60.022 45.833 0.00 0.00 0.00 2.85
512 524 3.893200 TCTCCCTTTGTTGACGTAGAAGA 59.107 43.478 0.00 0.00 0.00 2.87
515 527 5.617252 TCCCTTTGTTGACGTAGAAGATTT 58.383 37.500 0.00 0.00 0.00 2.17
516 528 6.059484 TCCCTTTGTTGACGTAGAAGATTTT 58.941 36.000 0.00 0.00 0.00 1.82
517 529 6.544564 TCCCTTTGTTGACGTAGAAGATTTTT 59.455 34.615 0.00 0.00 0.00 1.94
518 530 7.716123 TCCCTTTGTTGACGTAGAAGATTTTTA 59.284 33.333 0.00 0.00 0.00 1.52
519 531 7.801783 CCCTTTGTTGACGTAGAAGATTTTTAC 59.198 37.037 0.00 0.00 0.00 2.01
520 532 7.801783 CCTTTGTTGACGTAGAAGATTTTTACC 59.198 37.037 0.00 0.00 0.00 2.85
521 533 7.789273 TTGTTGACGTAGAAGATTTTTACCA 57.211 32.000 0.00 0.00 0.00 3.25
522 534 7.416154 TGTTGACGTAGAAGATTTTTACCAG 57.584 36.000 0.00 0.00 0.00 4.00
523 535 7.211573 TGTTGACGTAGAAGATTTTTACCAGA 58.788 34.615 0.00 0.00 0.00 3.86
524 536 7.384115 TGTTGACGTAGAAGATTTTTACCAGAG 59.616 37.037 0.00 0.00 0.00 3.35
525 537 5.867716 TGACGTAGAAGATTTTTACCAGAGC 59.132 40.000 0.00 0.00 0.00 4.09
557 579 1.065926 TGAGCACATCCTGATCACACC 60.066 52.381 0.00 0.00 40.46 4.16
561 583 2.636830 CACATCCTGATCACACCCTTC 58.363 52.381 0.00 0.00 0.00 3.46
567 589 4.398319 TCCTGATCACACCCTTCTTTTTC 58.602 43.478 0.00 0.00 0.00 2.29
568 590 4.104738 TCCTGATCACACCCTTCTTTTTCT 59.895 41.667 0.00 0.00 0.00 2.52
580 602 4.155644 CCTTCTTTTTCTGAGCACATCCTC 59.844 45.833 0.00 0.00 0.00 3.71
581 603 3.679389 TCTTTTTCTGAGCACATCCTCC 58.321 45.455 0.00 0.00 0.00 4.30
583 605 2.775911 TTTCTGAGCACATCCTCCTG 57.224 50.000 0.00 0.00 0.00 3.86
585 607 2.171568 TCTGAGCACATCCTCCTGAT 57.828 50.000 0.00 0.00 0.00 2.90
700 728 3.719214 GCAGGTAGCGGCATACAC 58.281 61.111 12.29 0.00 0.00 2.90
821 849 3.083997 GGACCAGGATCCGTGCCT 61.084 66.667 5.98 0.00 35.75 4.75
822 850 2.670148 GGACCAGGATCCGTGCCTT 61.670 63.158 5.98 0.00 32.12 4.35
1224 1255 1.448189 GCACCCGCATTGGTACGTA 60.448 57.895 0.00 0.00 36.67 3.57
1225 1256 1.698714 GCACCCGCATTGGTACGTAC 61.699 60.000 17.56 17.56 36.67 3.67
1226 1257 0.108520 CACCCGCATTGGTACGTACT 60.109 55.000 24.07 2.78 36.67 2.73
1284 1316 4.301027 CCTCTATCCGGCCGGCAC 62.301 72.222 39.89 16.91 34.68 5.01
1402 1438 2.366916 ACATGCCTAGATCTTCTTCCCG 59.633 50.000 0.00 0.00 0.00 5.14
1403 1439 2.454336 TGCCTAGATCTTCTTCCCGA 57.546 50.000 0.00 0.00 0.00 5.14
1442 1495 2.276201 CCAAAATGCATGTGATGGCTG 58.724 47.619 0.00 0.00 0.00 4.85
1458 1511 1.606224 GGCTGAACCAAATGCACCTTG 60.606 52.381 0.00 0.00 38.86 3.61
1529 1582 1.000107 TGCACATGGGGCTTGCATA 60.000 52.632 12.08 0.00 41.29 3.14
1541 1594 2.082231 GCTTGCATATCGCCATGATCT 58.918 47.619 0.00 0.00 41.33 2.75
1573 1626 7.039784 ACTCTTGCAACCTTTTCTATTTATGCA 60.040 33.333 0.00 0.00 40.43 3.96
2050 2110 4.382685 CCACTCCGTCAGCTTCCTATTTTA 60.383 45.833 0.00 0.00 0.00 1.52
2133 2200 6.171213 AGGCAAGTTACTACACTAAATCCAC 58.829 40.000 0.00 0.00 0.00 4.02
2142 2209 2.236395 ACACTAAATCCACCTCGAAGGG 59.764 50.000 5.98 0.00 40.58 3.95
2148 2215 4.684484 AATCCACCTCGAAGGGTATAAC 57.316 45.455 0.00 0.00 40.58 1.89
2191 2258 9.515020 CAATAAAACAAAGAGTAAGTGCAGAAA 57.485 29.630 0.00 0.00 0.00 2.52
2195 2262 9.899226 AAAACAAAGAGTAAGTGCAGAAATATC 57.101 29.630 0.00 0.00 0.00 1.63
2196 2263 8.621532 AACAAAGAGTAAGTGCAGAAATATCA 57.378 30.769 0.00 0.00 0.00 2.15
2197 2264 8.621532 ACAAAGAGTAAGTGCAGAAATATCAA 57.378 30.769 0.00 0.00 0.00 2.57
2198 2265 9.066892 ACAAAGAGTAAGTGCAGAAATATCAAA 57.933 29.630 0.00 0.00 0.00 2.69
2199 2266 9.334693 CAAAGAGTAAGTGCAGAAATATCAAAC 57.665 33.333 0.00 0.00 0.00 2.93
2200 2267 8.854614 AAGAGTAAGTGCAGAAATATCAAACT 57.145 30.769 0.00 0.00 0.00 2.66
2201 2268 8.854614 AGAGTAAGTGCAGAAATATCAAACTT 57.145 30.769 0.00 0.00 32.73 2.66
2202 2269 9.289782 AGAGTAAGTGCAGAAATATCAAACTTT 57.710 29.630 0.00 0.00 31.41 2.66
2203 2270 9.899226 GAGTAAGTGCAGAAATATCAAACTTTT 57.101 29.630 0.00 0.00 31.41 2.27
2366 2451 4.380233 CCATCCTTTGTCTTGATGTTGAGC 60.380 45.833 0.00 0.00 35.26 4.26
2381 2468 4.127171 TGTTGAGCAGTAGTTTGACTTCC 58.873 43.478 0.00 0.00 0.00 3.46
2387 2474 4.705507 AGCAGTAGTTTGACTTCCGATAGA 59.294 41.667 0.00 0.00 39.76 1.98
2391 2478 7.412020 GCAGTAGTTTGACTTCCGATAGAAAAG 60.412 40.741 0.00 0.00 32.88 2.27
2424 2511 1.380524 ACGACTAGGTCATCCACTCG 58.619 55.000 0.00 0.00 35.89 4.18
2435 2522 1.617947 ATCCACTCGGTCAGCTTCCC 61.618 60.000 0.00 0.00 0.00 3.97
2441 2528 1.740025 CTCGGTCAGCTTCCCATTTTC 59.260 52.381 0.00 0.00 0.00 2.29
2509 2596 7.360575 ACACTTAATCCAACTCGAATGTTAC 57.639 36.000 0.00 0.00 0.00 2.50
2518 2605 6.485313 TCCAACTCGAATGTTACAACAAATCT 59.515 34.615 0.00 0.00 43.03 2.40
2582 2669 8.228035 AGTAAGTGCATTACCAAACTTTTACA 57.772 30.769 12.51 0.00 44.20 2.41
2588 2675 8.301002 GTGCATTACCAAACTTTTACATAGGAA 58.699 33.333 0.00 0.00 0.00 3.36
2642 2733 5.646467 TTTTAACACAGTAGAGACGCAAC 57.354 39.130 0.00 0.00 0.00 4.17
2643 2734 1.767289 AACACAGTAGAGACGCAACG 58.233 50.000 0.00 0.00 0.00 4.10
2644 2735 0.663568 ACACAGTAGAGACGCAACGC 60.664 55.000 0.00 0.00 0.00 4.84
2645 2736 0.387367 CACAGTAGAGACGCAACGCT 60.387 55.000 0.00 0.00 0.00 5.07
2646 2737 0.109689 ACAGTAGAGACGCAACGCTC 60.110 55.000 0.00 0.00 33.03 5.03
2647 2738 0.109735 CAGTAGAGACGCAACGCTCA 60.110 55.000 11.81 0.00 34.41 4.26
2648 2739 0.811915 AGTAGAGACGCAACGCTCAT 59.188 50.000 11.81 3.25 34.41 2.90
2649 2740 2.014857 AGTAGAGACGCAACGCTCATA 58.985 47.619 11.81 2.59 34.41 2.15
2650 2741 2.619177 AGTAGAGACGCAACGCTCATAT 59.381 45.455 11.81 0.00 34.41 1.78
2651 2742 3.813724 AGTAGAGACGCAACGCTCATATA 59.186 43.478 11.81 0.00 34.41 0.86
2652 2743 3.001395 AGAGACGCAACGCTCATATAC 57.999 47.619 11.81 0.00 34.41 1.47
2653 2744 2.357952 AGAGACGCAACGCTCATATACA 59.642 45.455 11.81 0.00 34.41 2.29
2654 2745 2.460918 AGACGCAACGCTCATATACAC 58.539 47.619 0.00 0.00 0.00 2.90
2655 2746 1.187271 GACGCAACGCTCATATACACG 59.813 52.381 0.00 0.00 0.00 4.49
2656 2747 1.197055 CGCAACGCTCATATACACGT 58.803 50.000 0.00 0.00 41.16 4.49
2657 2748 1.072154 CGCAACGCTCATATACACGTG 60.072 52.381 15.48 15.48 39.00 4.49
2658 2749 1.332028 GCAACGCTCATATACACGTGC 60.332 52.381 17.22 0.00 39.00 5.34
2659 2750 1.923864 CAACGCTCATATACACGTGCA 59.076 47.619 17.22 2.06 39.00 4.57
2660 2751 2.509052 ACGCTCATATACACGTGCAT 57.491 45.000 17.22 11.52 37.37 3.96
2661 2752 3.636282 ACGCTCATATACACGTGCATA 57.364 42.857 17.22 13.68 37.37 3.14
2662 2753 3.305964 ACGCTCATATACACGTGCATAC 58.694 45.455 17.22 0.00 37.37 2.39
2663 2754 3.243267 ACGCTCATATACACGTGCATACA 60.243 43.478 17.22 2.39 37.37 2.29
2664 2755 3.119628 CGCTCATATACACGTGCATACAC 59.880 47.826 17.22 2.67 43.76 2.90
2665 2756 4.299155 GCTCATATACACGTGCATACACT 58.701 43.478 17.22 0.00 45.10 3.55
2666 2757 4.383052 GCTCATATACACGTGCATACACTC 59.617 45.833 17.22 0.27 45.10 3.51
2667 2758 5.508200 TCATATACACGTGCATACACTCA 57.492 39.130 17.22 0.00 45.10 3.41
2668 2759 5.278604 TCATATACACGTGCATACACTCAC 58.721 41.667 17.22 0.00 45.10 3.51
2669 2760 2.357327 TACACGTGCATACACTCACC 57.643 50.000 17.22 0.00 45.10 4.02
2670 2761 0.320421 ACACGTGCATACACTCACCC 60.320 55.000 17.22 0.00 45.10 4.61
2671 2762 1.019278 CACGTGCATACACTCACCCC 61.019 60.000 0.82 0.00 45.10 4.95
2672 2763 1.192146 ACGTGCATACACTCACCCCT 61.192 55.000 0.00 0.00 45.10 4.79
2673 2764 0.821517 CGTGCATACACTCACCCCTA 59.178 55.000 0.00 0.00 45.10 3.53
2674 2765 1.412710 CGTGCATACACTCACCCCTAT 59.587 52.381 0.00 0.00 45.10 2.57
2675 2766 2.803133 CGTGCATACACTCACCCCTATG 60.803 54.545 0.00 0.00 45.10 2.23
2676 2767 2.434336 GTGCATACACTCACCCCTATGA 59.566 50.000 0.00 0.00 43.85 2.15
2677 2768 3.111484 TGCATACACTCACCCCTATGAA 58.889 45.455 0.00 0.00 0.00 2.57
2678 2769 3.716353 TGCATACACTCACCCCTATGAAT 59.284 43.478 0.00 0.00 0.00 2.57
2679 2770 4.067896 GCATACACTCACCCCTATGAATG 58.932 47.826 0.00 0.00 32.12 2.67
2680 2771 2.717639 ACACTCACCCCTATGAATGC 57.282 50.000 0.00 0.00 28.78 3.56
2681 2772 1.134401 ACACTCACCCCTATGAATGCG 60.134 52.381 0.00 0.00 28.78 4.73
2682 2773 0.179045 ACTCACCCCTATGAATGCGC 60.179 55.000 0.00 0.00 0.00 6.09
2683 2774 1.224069 CTCACCCCTATGAATGCGCG 61.224 60.000 0.00 0.00 0.00 6.86
2684 2775 2.591715 ACCCCTATGAATGCGCGC 60.592 61.111 27.26 27.26 0.00 6.86
2685 2776 2.591429 CCCCTATGAATGCGCGCA 60.591 61.111 38.27 38.27 0.00 6.09
2686 2777 2.633657 CCCTATGAATGCGCGCAC 59.366 61.111 39.05 25.56 0.00 5.34
2687 2778 2.179547 CCCTATGAATGCGCGCACA 61.180 57.895 39.05 30.62 0.00 4.57
2688 2779 1.010797 CCTATGAATGCGCGCACAC 60.011 57.895 39.05 30.81 0.00 3.82
2689 2780 1.704387 CCTATGAATGCGCGCACACA 61.704 55.000 39.05 35.04 0.00 3.72
2690 2781 0.587242 CTATGAATGCGCGCACACAC 60.587 55.000 39.05 25.79 0.00 3.82
2691 2782 1.294659 TATGAATGCGCGCACACACA 61.295 50.000 39.05 30.13 0.00 3.72
2692 2783 2.784957 ATGAATGCGCGCACACACAC 62.785 55.000 39.05 22.30 0.00 3.82
2693 2784 4.326766 AATGCGCGCACACACACC 62.327 61.111 39.05 0.79 0.00 4.16
2697 2788 3.411351 CGCGCACACACACCCTAC 61.411 66.667 8.75 0.00 0.00 3.18
2698 2789 3.047877 GCGCACACACACCCTACC 61.048 66.667 0.30 0.00 0.00 3.18
2699 2790 2.741092 CGCACACACACCCTACCT 59.259 61.111 0.00 0.00 0.00 3.08
2700 2791 1.374252 CGCACACACACCCTACCTC 60.374 63.158 0.00 0.00 0.00 3.85
2701 2792 1.816863 CGCACACACACCCTACCTCT 61.817 60.000 0.00 0.00 0.00 3.69
2702 2793 1.263356 GCACACACACCCTACCTCTA 58.737 55.000 0.00 0.00 0.00 2.43
2703 2794 1.067071 GCACACACACCCTACCTCTAC 60.067 57.143 0.00 0.00 0.00 2.59
2704 2795 1.201647 CACACACACCCTACCTCTACG 59.798 57.143 0.00 0.00 0.00 3.51
2705 2796 1.074405 ACACACACCCTACCTCTACGA 59.926 52.381 0.00 0.00 0.00 3.43
2706 2797 1.743958 CACACACCCTACCTCTACGAG 59.256 57.143 0.00 0.00 0.00 4.18
2707 2798 0.739561 CACACCCTACCTCTACGAGC 59.260 60.000 0.00 0.00 0.00 5.03
2708 2799 0.330604 ACACCCTACCTCTACGAGCA 59.669 55.000 0.00 0.00 0.00 4.26
2709 2800 0.739561 CACCCTACCTCTACGAGCAC 59.260 60.000 0.00 0.00 0.00 4.40
2710 2801 0.395448 ACCCTACCTCTACGAGCACC 60.395 60.000 0.00 0.00 0.00 5.01
2711 2802 0.106619 CCCTACCTCTACGAGCACCT 60.107 60.000 0.00 0.00 0.00 4.00
2712 2803 1.310904 CCTACCTCTACGAGCACCTC 58.689 60.000 0.00 0.00 0.00 3.85
2722 2813 3.129792 GAGCACCTCGGAAAGACTG 57.870 57.895 0.00 0.00 0.00 3.51
2723 2814 0.603569 GAGCACCTCGGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
2727 2818 4.485554 CTCGGAAAGACTGAGCCG 57.514 61.111 0.00 0.00 43.75 5.52
2729 2820 0.456995 CTCGGAAAGACTGAGCCGAC 60.457 60.000 8.91 0.00 46.80 4.79
2730 2821 1.176619 TCGGAAAGACTGAGCCGACA 61.177 55.000 8.91 0.00 46.80 4.35
2731 2822 0.108615 CGGAAAGACTGAGCCGACAT 60.109 55.000 0.00 0.00 46.29 3.06
2732 2823 1.134367 CGGAAAGACTGAGCCGACATA 59.866 52.381 0.00 0.00 46.29 2.29
2733 2824 2.223829 CGGAAAGACTGAGCCGACATAT 60.224 50.000 0.00 0.00 46.29 1.78
2734 2825 3.385577 GGAAAGACTGAGCCGACATATC 58.614 50.000 0.00 0.00 0.00 1.63
2735 2826 3.181475 GGAAAGACTGAGCCGACATATCA 60.181 47.826 0.00 0.00 0.00 2.15
2736 2827 4.502259 GGAAAGACTGAGCCGACATATCAT 60.502 45.833 0.00 0.00 0.00 2.45
2737 2828 3.932545 AGACTGAGCCGACATATCATC 57.067 47.619 0.00 0.00 0.00 2.92
2738 2829 3.495331 AGACTGAGCCGACATATCATCT 58.505 45.455 0.00 0.00 0.00 2.90
2739 2830 3.894427 AGACTGAGCCGACATATCATCTT 59.106 43.478 0.00 0.00 0.00 2.40
2740 2831 3.986572 GACTGAGCCGACATATCATCTTG 59.013 47.826 0.00 0.00 0.00 3.02
2741 2832 3.638627 ACTGAGCCGACATATCATCTTGA 59.361 43.478 0.00 0.00 0.00 3.02
2742 2833 4.100035 ACTGAGCCGACATATCATCTTGAA 59.900 41.667 0.00 0.00 0.00 2.69
2743 2834 5.022282 TGAGCCGACATATCATCTTGAAA 57.978 39.130 0.00 0.00 0.00 2.69
2744 2835 5.614308 TGAGCCGACATATCATCTTGAAAT 58.386 37.500 0.00 0.00 0.00 2.17
2745 2836 6.057533 TGAGCCGACATATCATCTTGAAATT 58.942 36.000 0.00 0.00 0.00 1.82
2746 2837 6.543465 TGAGCCGACATATCATCTTGAAATTT 59.457 34.615 0.00 0.00 0.00 1.82
2747 2838 7.714813 TGAGCCGACATATCATCTTGAAATTTA 59.285 33.333 0.00 0.00 0.00 1.40
2748 2839 8.627208 AGCCGACATATCATCTTGAAATTTAT 57.373 30.769 0.00 0.00 0.00 1.40
2749 2840 8.509690 AGCCGACATATCATCTTGAAATTTATG 58.490 33.333 0.00 0.00 0.00 1.90
2750 2841 8.506437 GCCGACATATCATCTTGAAATTTATGA 58.494 33.333 4.30 4.30 33.20 2.15
2758 2849 7.751732 TCATCTTGAAATTTATGAAGTCACCG 58.248 34.615 0.00 0.00 0.00 4.94
2759 2850 7.390440 TCATCTTGAAATTTATGAAGTCACCGT 59.610 33.333 0.00 0.00 0.00 4.83
2760 2851 8.664798 CATCTTGAAATTTATGAAGTCACCGTA 58.335 33.333 0.00 0.00 0.00 4.02
2761 2852 8.251750 TCTTGAAATTTATGAAGTCACCGTAG 57.748 34.615 0.00 0.00 0.00 3.51
2773 2864 3.437795 CCGTAGGCACCTCGTCGT 61.438 66.667 0.00 0.00 46.14 4.34
2774 2865 2.099831 CGTAGGCACCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
2775 2866 2.099831 GTAGGCACCTCGTCGTCG 59.900 66.667 0.00 0.00 38.55 5.12
2776 2867 2.046988 TAGGCACCTCGTCGTCGA 60.047 61.111 4.42 4.42 44.12 4.20
2777 2868 2.393768 TAGGCACCTCGTCGTCGAC 61.394 63.158 15.51 15.51 41.35 4.20
2796 2887 2.708386 CGAGAACGTCTCTTTCCACT 57.292 50.000 11.50 0.00 41.26 4.00
2797 2888 2.320367 CGAGAACGTCTCTTTCCACTG 58.680 52.381 11.50 0.00 41.26 3.66
2798 2889 2.031069 CGAGAACGTCTCTTTCCACTGA 60.031 50.000 11.50 0.00 41.26 3.41
2799 2890 3.550233 CGAGAACGTCTCTTTCCACTGAA 60.550 47.826 11.50 0.00 41.26 3.02
2800 2891 4.561105 GAGAACGTCTCTTTCCACTGAAT 58.439 43.478 0.00 0.00 40.30 2.57
2801 2892 4.310769 AGAACGTCTCTTTCCACTGAATG 58.689 43.478 0.00 0.00 0.00 2.67
2802 2893 2.417719 ACGTCTCTTTCCACTGAATGC 58.582 47.619 0.00 0.00 0.00 3.56
2803 2894 1.391485 CGTCTCTTTCCACTGAATGCG 59.609 52.381 0.00 0.00 0.00 4.73
2804 2895 1.129437 GTCTCTTTCCACTGAATGCGC 59.871 52.381 0.00 0.00 0.00 6.09
2805 2896 1.159285 CTCTTTCCACTGAATGCGCA 58.841 50.000 14.96 14.96 0.00 6.09
2806 2897 1.741706 CTCTTTCCACTGAATGCGCAT 59.258 47.619 19.28 19.28 0.00 4.73
2807 2898 1.739466 TCTTTCCACTGAATGCGCATC 59.261 47.619 25.53 17.12 0.00 3.91
2808 2899 0.447406 TTTCCACTGAATGCGCATCG 59.553 50.000 25.53 17.09 0.00 3.84
2819 2910 4.240103 CGCATCGCCATCCTCCCA 62.240 66.667 0.00 0.00 0.00 4.37
2820 2911 2.592861 GCATCGCCATCCTCCCAC 60.593 66.667 0.00 0.00 0.00 4.61
2821 2912 3.112205 GCATCGCCATCCTCCCACT 62.112 63.158 0.00 0.00 0.00 4.00
2822 2913 1.227764 CATCGCCATCCTCCCACTG 60.228 63.158 0.00 0.00 0.00 3.66
2823 2914 1.383109 ATCGCCATCCTCCCACTGA 60.383 57.895 0.00 0.00 0.00 3.41
2824 2915 0.982852 ATCGCCATCCTCCCACTGAA 60.983 55.000 0.00 0.00 0.00 3.02
2825 2916 0.982852 TCGCCATCCTCCCACTGAAT 60.983 55.000 0.00 0.00 0.00 2.57
2826 2917 0.816825 CGCCATCCTCCCACTGAATG 60.817 60.000 0.00 0.00 0.00 2.67
2827 2918 1.105759 GCCATCCTCCCACTGAATGC 61.106 60.000 0.00 0.00 0.00 3.56
2828 2919 0.816825 CCATCCTCCCACTGAATGCG 60.817 60.000 0.00 0.00 0.00 4.73
2829 2920 1.153086 ATCCTCCCACTGAATGCGC 60.153 57.895 0.00 0.00 0.00 6.09
2830 2921 1.913951 ATCCTCCCACTGAATGCGCA 61.914 55.000 14.96 14.96 0.00 6.09
2831 2922 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
2832 2923 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
2833 2924 0.745486 CTCCCACTGAATGCGCATCA 60.745 55.000 25.53 20.60 0.00 3.07
2834 2925 0.107066 TCCCACTGAATGCGCATCAT 60.107 50.000 25.53 9.22 36.87 2.45
2835 2926 0.309922 CCCACTGAATGCGCATCATC 59.690 55.000 25.53 18.94 33.40 2.92
2836 2927 1.018910 CCACTGAATGCGCATCATCA 58.981 50.000 25.53 22.53 33.40 3.07
2837 2928 1.002792 CCACTGAATGCGCATCATCAG 60.003 52.381 34.54 34.54 36.88 2.90
2838 2929 1.937899 CACTGAATGCGCATCATCAGA 59.062 47.619 39.29 16.79 35.64 3.27
2839 2930 2.353579 CACTGAATGCGCATCATCAGAA 59.646 45.455 39.29 16.22 35.64 3.02
2840 2931 3.011818 ACTGAATGCGCATCATCAGAAA 58.988 40.909 39.29 15.93 35.64 2.52
2841 2932 3.630769 ACTGAATGCGCATCATCAGAAAT 59.369 39.130 39.29 24.48 35.64 2.17
2842 2933 4.097437 ACTGAATGCGCATCATCAGAAATT 59.903 37.500 39.29 24.21 35.64 1.82
2843 2934 4.603985 TGAATGCGCATCATCAGAAATTC 58.396 39.130 25.53 14.33 33.40 2.17
2844 2935 4.337274 TGAATGCGCATCATCAGAAATTCT 59.663 37.500 25.53 2.12 33.40 2.40
2845 2936 3.685836 TGCGCATCATCAGAAATTCTG 57.314 42.857 16.39 16.39 45.59 3.02
2870 2961 9.236691 TGAAATAATTCAAGAATAAATGCGAGC 57.763 29.630 0.00 0.00 42.47 5.03
2871 2962 9.236691 GAAATAATTCAAGAATAAATGCGAGCA 57.763 29.630 0.00 0.00 35.54 4.26
2872 2963 9.754382 AAATAATTCAAGAATAAATGCGAGCAT 57.246 25.926 4.52 4.52 38.46 3.79
2873 2964 8.961294 ATAATTCAAGAATAAATGCGAGCATC 57.039 30.769 11.26 0.00 35.31 3.91
2874 2965 5.816449 TTCAAGAATAAATGCGAGCATCA 57.184 34.783 11.26 3.11 35.31 3.07
2875 2966 5.413969 TCAAGAATAAATGCGAGCATCAG 57.586 39.130 11.26 0.00 35.31 2.90
2876 2967 4.274214 TCAAGAATAAATGCGAGCATCAGG 59.726 41.667 11.26 0.00 35.31 3.86
2877 2968 4.077300 AGAATAAATGCGAGCATCAGGA 57.923 40.909 11.26 0.00 35.31 3.86
2878 2969 3.812053 AGAATAAATGCGAGCATCAGGAC 59.188 43.478 11.26 4.17 35.31 3.85
2879 2970 2.988010 TAAATGCGAGCATCAGGACT 57.012 45.000 11.26 0.00 35.31 3.85
2880 2971 2.119801 AAATGCGAGCATCAGGACTT 57.880 45.000 11.26 0.00 35.31 3.01
2881 2972 1.376543 AATGCGAGCATCAGGACTTG 58.623 50.000 11.26 0.00 35.31 3.16
2882 2973 0.538584 ATGCGAGCATCAGGACTTGA 59.461 50.000 4.52 0.00 40.85 3.02
2883 2974 0.321346 TGCGAGCATCAGGACTTGAA 59.679 50.000 0.00 0.00 39.77 2.69
2884 2975 1.270785 TGCGAGCATCAGGACTTGAAA 60.271 47.619 0.00 0.00 39.77 2.69
2885 2976 1.129437 GCGAGCATCAGGACTTGAAAC 59.871 52.381 0.00 0.00 39.77 2.78
2886 2977 1.734465 CGAGCATCAGGACTTGAAACC 59.266 52.381 0.00 0.00 39.77 3.27
2887 2978 2.613977 CGAGCATCAGGACTTGAAACCT 60.614 50.000 0.00 0.00 39.77 3.50
2893 2984 2.887151 AGGACTTGAAACCTGATGGG 57.113 50.000 0.00 0.00 41.89 4.00
2894 2985 1.177401 GGACTTGAAACCTGATGGGC 58.823 55.000 0.00 0.00 39.10 5.36
2895 2986 1.272147 GGACTTGAAACCTGATGGGCT 60.272 52.381 0.00 0.00 39.10 5.19
2896 2987 1.815003 GACTTGAAACCTGATGGGCTG 59.185 52.381 0.00 0.00 39.10 4.85
2897 2988 1.180029 CTTGAAACCTGATGGGCTGG 58.820 55.000 0.00 0.00 41.12 4.85
2898 2989 0.251742 TTGAAACCTGATGGGCTGGG 60.252 55.000 0.00 0.00 39.75 4.45
2899 2990 1.139498 TGAAACCTGATGGGCTGGGA 61.139 55.000 0.00 0.00 39.75 4.37
2900 2991 0.039618 GAAACCTGATGGGCTGGGAA 59.960 55.000 0.00 0.00 39.75 3.97
2901 2992 0.712380 AAACCTGATGGGCTGGGAAT 59.288 50.000 0.00 0.00 39.75 3.01
2902 2993 1.607225 AACCTGATGGGCTGGGAATA 58.393 50.000 0.00 0.00 39.75 1.75
2903 2994 0.846693 ACCTGATGGGCTGGGAATAC 59.153 55.000 0.00 0.00 39.75 1.89
2904 2995 0.111253 CCTGATGGGCTGGGAATACC 59.889 60.000 0.00 0.00 40.81 2.73
2906 2997 0.550914 TGATGGGCTGGGAATACCAC 59.449 55.000 0.00 0.00 46.80 4.16
2907 2998 0.550914 GATGGGCTGGGAATACCACA 59.449 55.000 0.00 0.00 46.80 4.17
2908 2999 0.552848 ATGGGCTGGGAATACCACAG 59.447 55.000 0.00 0.00 46.80 3.66
2909 3000 0.844661 TGGGCTGGGAATACCACAGT 60.845 55.000 0.00 0.00 46.80 3.55
2910 3001 0.107165 GGGCTGGGAATACCACAGTC 60.107 60.000 0.00 0.00 46.80 3.51
2911 3002 0.107165 GGCTGGGAATACCACAGTCC 60.107 60.000 0.00 0.00 46.80 3.85
2918 3009 4.403585 GGAATACCACAGTCCCTCTAAC 57.596 50.000 0.00 0.00 35.23 2.34
3009 3113 1.857217 CGTAGTGATGTGATGCAGAGC 59.143 52.381 0.00 0.00 0.00 4.09
3061 3165 2.843730 TGGTTGCAGTACCATATCCAGT 59.156 45.455 6.14 0.00 43.14 4.00
3085 3192 0.883833 CCAGCTGGGATGTCAACAAC 59.116 55.000 26.14 0.00 40.01 3.32
3102 3209 7.117236 TGTCAACAACGAAAGAATCCTACATAC 59.883 37.037 0.00 0.00 0.00 2.39
3281 3397 1.166531 AGCAGTTGCCGTTGGACTTC 61.167 55.000 0.00 0.00 43.38 3.01
3437 3557 2.918802 TCGGCAGTTGGTACGGGT 60.919 61.111 0.00 0.00 0.00 5.28
3639 3774 3.090765 GGCCCACCTTCACCTCAT 58.909 61.111 0.00 0.00 0.00 2.90
3640 3775 1.379044 GGCCCACCTTCACCTCATG 60.379 63.158 0.00 0.00 0.00 3.07
3641 3776 2.048603 GCCCACCTTCACCTCATGC 61.049 63.158 0.00 0.00 0.00 4.06
3642 3777 1.379916 CCCACCTTCACCTCATGCA 59.620 57.895 0.00 0.00 0.00 3.96
3644 3779 0.962356 CCACCTTCACCTCATGCACC 60.962 60.000 0.00 0.00 0.00 5.01
3645 3780 0.037303 CACCTTCACCTCATGCACCT 59.963 55.000 0.00 0.00 0.00 4.00
3646 3781 0.773644 ACCTTCACCTCATGCACCTT 59.226 50.000 0.00 0.00 0.00 3.50
3647 3782 1.145738 ACCTTCACCTCATGCACCTTT 59.854 47.619 0.00 0.00 0.00 3.11
3648 3783 1.815003 CCTTCACCTCATGCACCTTTC 59.185 52.381 0.00 0.00 0.00 2.62
3649 3784 2.553904 CCTTCACCTCATGCACCTTTCT 60.554 50.000 0.00 0.00 0.00 2.52
3650 3785 2.957402 TCACCTCATGCACCTTTCTT 57.043 45.000 0.00 0.00 0.00 2.52
3651 3786 3.228188 TCACCTCATGCACCTTTCTTT 57.772 42.857 0.00 0.00 0.00 2.52
3652 3787 3.565307 TCACCTCATGCACCTTTCTTTT 58.435 40.909 0.00 0.00 0.00 2.27
3653 3788 3.960102 TCACCTCATGCACCTTTCTTTTT 59.040 39.130 0.00 0.00 0.00 1.94
3705 3851 2.230992 CGCTTCTGGGGATCTGAGATAG 59.769 54.545 0.00 0.00 0.00 2.08
3713 3859 3.761752 GGGGATCTGAGATAGTACTGCTC 59.238 52.174 16.43 16.43 0.00 4.26
3783 3932 4.168760 GCATATGCTTTGACTTGTGAACC 58.831 43.478 20.64 0.00 38.21 3.62
3847 3996 1.193874 CTACCGTGTTCCTTGTTTCGC 59.806 52.381 0.00 0.00 0.00 4.70
3858 4007 3.319972 TCCTTGTTTCGCAGTACAGTACT 59.680 43.478 7.48 7.48 40.28 2.73
3877 4026 7.230913 ACAGTACTGTACAAGCTTTCTCTAGAA 59.769 37.037 26.91 0.00 42.90 2.10
3887 4036 5.184711 AGCTTTCTCTAGAAGCATTTCCTG 58.815 41.667 15.52 0.00 35.21 3.86
4020 4175 9.403110 CTGATCAAAACATACCAAAAGAAAGAG 57.597 33.333 0.00 0.00 0.00 2.85
4069 4234 3.907130 ACAAAGCCAGCCAGCCCT 61.907 61.111 0.00 0.00 0.00 5.19
4070 4235 3.066814 CAAAGCCAGCCAGCCCTC 61.067 66.667 0.00 0.00 0.00 4.30
4118 4290 2.852449 TCTTTCCACGTGCCATGTTTA 58.148 42.857 10.91 0.00 0.00 2.01
4129 4301 3.064820 GTGCCATGTTTACCAGTAATCCG 59.935 47.826 0.00 0.00 0.00 4.18
4132 4304 4.509616 CCATGTTTACCAGTAATCCGTCA 58.490 43.478 0.00 0.00 0.00 4.35
4532 4734 5.871396 AGTTATCCTCTTGAATCGCCTTA 57.129 39.130 0.00 0.00 0.00 2.69
4533 4735 6.235231 AGTTATCCTCTTGAATCGCCTTAA 57.765 37.500 0.00 0.00 0.00 1.85
4534 4736 6.831976 AGTTATCCTCTTGAATCGCCTTAAT 58.168 36.000 0.00 0.00 0.00 1.40
4535 4737 7.283329 AGTTATCCTCTTGAATCGCCTTAATT 58.717 34.615 0.00 0.00 0.00 1.40
4574 4776 3.535629 TTCCGTGGGCACAGCTCTG 62.536 63.158 0.00 0.00 0.00 3.35
4620 4842 9.490663 CATATCGAGTGTTTATTTGTTTCTTCC 57.509 33.333 0.00 0.00 0.00 3.46
4643 4865 1.394572 CTGTGAGTGTGTGTGTGTGTG 59.605 52.381 0.00 0.00 0.00 3.82
4644 4866 0.096976 GTGAGTGTGTGTGTGTGTGC 59.903 55.000 0.00 0.00 0.00 4.57
4645 4867 1.348250 GAGTGTGTGTGTGTGTGCG 59.652 57.895 0.00 0.00 0.00 5.34
4646 4868 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
4647 4869 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
4773 5000 3.755378 GAGGTCTACGAGTAAGTTCACCA 59.245 47.826 0.00 0.00 30.94 4.17
4805 5032 0.320247 CTGTCCTGCTGCTTCGACTT 60.320 55.000 0.00 0.00 0.00 3.01
4855 5130 7.655328 TGAGTCTTCTTCTTCTTCAACTGATTC 59.345 37.037 0.00 0.00 0.00 2.52
4885 5160 1.873698 TCCGTTTCCGTTTCCTCTTG 58.126 50.000 0.00 0.00 0.00 3.02
4999 5278 3.971305 TCTCCTCTCTAGCAGCTACTACT 59.029 47.826 0.00 0.00 0.00 2.57
5037 5325 6.424207 GTGTAGATTTGGGGATCGAGAAATAC 59.576 42.308 0.00 0.00 0.00 1.89
5108 5398 2.047274 CGGCGCATAATCCGGGAT 60.047 61.111 10.83 2.97 41.82 3.85
5183 5473 1.453155 ACTGCCGCTTGTCCTAATTG 58.547 50.000 0.00 0.00 0.00 2.32
5184 5474 0.099436 CTGCCGCTTGTCCTAATTGC 59.901 55.000 0.00 0.00 0.00 3.56
5185 5475 0.607762 TGCCGCTTGTCCTAATTGCA 60.608 50.000 0.00 0.00 0.00 4.08
5186 5476 0.740737 GCCGCTTGTCCTAATTGCAT 59.259 50.000 0.00 0.00 0.00 3.96
5187 5477 1.534595 GCCGCTTGTCCTAATTGCATG 60.535 52.381 0.00 0.00 0.00 4.06
5205 5495 2.112815 GGCATGGCCTGACCGTAAC 61.113 63.158 8.35 0.00 46.69 2.50
5258 5555 9.314321 CCAGTTGATACTAGGTTATGTGTTAAG 57.686 37.037 0.00 0.00 31.96 1.85
5267 5564 5.067954 AGGTTATGTGTTAAGACAACCACC 58.932 41.667 22.04 19.56 36.05 4.61
5272 5569 2.032924 GTGTTAAGACAACCACCACTGC 59.967 50.000 0.00 0.00 37.57 4.40
5290 5597 3.765511 ACTGCACTACCGTACCAAAGATA 59.234 43.478 0.00 0.00 0.00 1.98
5503 5829 9.931210 GTGGTATTAGAATATGGTTCTTTTTCG 57.069 33.333 1.20 0.00 0.00 3.46
5518 5844 3.430333 TTTTCGCCCTTTTCTGTTGTC 57.570 42.857 0.00 0.00 0.00 3.18
5519 5845 1.314730 TTCGCCCTTTTCTGTTGTCC 58.685 50.000 0.00 0.00 0.00 4.02
5588 5914 5.970592 AGCAGCATTTTATTTTTCCTCTCC 58.029 37.500 0.00 0.00 0.00 3.71
5672 6022 3.750371 TGTGTTGAATTTCGATCCCAGT 58.250 40.909 0.00 0.00 0.00 4.00
5685 6035 0.827925 TCCCAGTCGTCTCAGTTGCT 60.828 55.000 0.00 0.00 0.00 3.91
5688 6038 1.005630 AGTCGTCTCAGTTGCTGCC 60.006 57.895 0.00 0.00 0.00 4.85
5947 6303 2.357396 TATGGCTATGGCGCTGCG 60.357 61.111 19.17 19.17 39.81 5.18
5986 6351 1.211949 TGATTAAGCAGGCCCTACCAC 59.788 52.381 0.00 0.00 43.14 4.16
5994 6359 0.974525 AGGCCCTACCACGGAGTTAC 60.975 60.000 0.00 0.00 41.61 2.50
6000 6365 2.159000 CCTACCACGGAGTTACCAATCC 60.159 54.545 0.00 0.00 41.61 3.01
6045 6417 1.961277 GTGTGTGGACGGAGCCTTG 60.961 63.158 0.00 0.00 0.00 3.61
6046 6418 3.050275 GTGTGGACGGAGCCTTGC 61.050 66.667 0.00 0.00 0.00 4.01
6047 6419 4.680237 TGTGGACGGAGCCTTGCG 62.680 66.667 0.00 0.00 44.43 4.85
6056 6428 4.982701 AGCCTTGCGCCTGCCTTT 62.983 61.111 4.18 0.00 41.78 3.11
6057 6429 3.994853 GCCTTGCGCCTGCCTTTT 61.995 61.111 4.18 0.00 41.78 2.27
6075 6447 1.584175 TTACGAAAGAGTTTGGCGCA 58.416 45.000 10.83 0.00 0.00 6.09
6146 6526 2.254546 TAATCAGGTTGGCCTATGCG 57.745 50.000 3.32 0.00 44.97 4.73
6232 6634 2.758979 ACAGGGAGACGGTAATACTGTG 59.241 50.000 9.94 0.00 37.93 3.66
6240 6645 4.649674 AGACGGTAATACTGTGATCCACAT 59.350 41.667 9.94 0.00 43.71 3.21
6246 6651 6.870965 GGTAATACTGTGATCCACATCTGATC 59.129 42.308 0.00 0.00 43.71 2.92
6271 6676 1.064003 TGCCACATCCCACAGTAGTT 58.936 50.000 0.00 0.00 0.00 2.24
6313 6718 0.815734 TCCTGCAGTAGTACTTCCGC 59.184 55.000 13.81 0.00 0.00 5.54
6370 6782 1.403780 GCCTGCCTTCATTTCTTGCAG 60.404 52.381 0.00 0.00 46.82 4.41
6414 6829 4.515191 GTCTTGATAACTCACACAAAGGCA 59.485 41.667 0.00 0.00 0.00 4.75
6415 6830 4.756642 TCTTGATAACTCACACAAAGGCAG 59.243 41.667 0.00 0.00 0.00 4.85
6416 6831 3.411446 TGATAACTCACACAAAGGCAGG 58.589 45.455 0.00 0.00 0.00 4.85
6417 6832 1.604604 TAACTCACACAAAGGCAGGC 58.395 50.000 0.00 0.00 0.00 4.85
6418 6833 0.395586 AACTCACACAAAGGCAGGCA 60.396 50.000 0.00 0.00 0.00 4.75
6474 6889 3.165058 ACTGTCACGCGTCATAATCAT 57.835 42.857 9.86 0.00 0.00 2.45
6574 7004 1.893801 CCTTTCTGTCTCCTGTACCGT 59.106 52.381 0.00 0.00 0.00 4.83
6576 7006 3.119566 CCTTTCTGTCTCCTGTACCGTAC 60.120 52.174 1.40 1.40 0.00 3.67
6577 7007 1.730501 TCTGTCTCCTGTACCGTACG 58.269 55.000 8.69 8.69 0.00 3.67
6664 7100 5.340027 CCCTCTGGATAAAAAGTGGGTATGT 60.340 44.000 2.33 0.00 40.74 2.29
6799 7247 2.697431 TGTTTATGCGCTGAACAACC 57.303 45.000 9.73 0.00 31.04 3.77
6833 7285 4.067896 CACTAACCACTGTGAAATGCTCT 58.932 43.478 9.86 0.00 36.38 4.09
6910 7368 8.759641 GGAGCATCTTTTCTTTTCTTTTCTTTC 58.240 33.333 0.00 0.00 33.73 2.62
6913 7371 9.911980 GCATCTTTTCTTTTCTTTTCTTTCTTG 57.088 29.630 0.00 0.00 0.00 3.02
6944 7411 0.257328 TGGTGGTGGTGATTGTGTGT 59.743 50.000 0.00 0.00 0.00 3.72
6987 7454 4.961511 GACTCGCGTGTGTGCCCA 62.962 66.667 19.71 0.00 0.00 5.36
7116 7590 6.532988 TTTTTCTTTCTTCTTTTCCCCGAA 57.467 33.333 0.00 0.00 0.00 4.30
7137 7611 7.132213 CCGAAGTGCATTATTGACGATATTTT 58.868 34.615 0.00 0.00 0.00 1.82
7138 7612 7.643764 CCGAAGTGCATTATTGACGATATTTTT 59.356 33.333 0.00 0.00 0.00 1.94
7139 7613 8.463709 CGAAGTGCATTATTGACGATATTTTTG 58.536 33.333 0.00 0.00 0.00 2.44
7140 7614 7.684062 AGTGCATTATTGACGATATTTTTGC 57.316 32.000 0.00 0.00 0.00 3.68
7141 7615 6.697019 AGTGCATTATTGACGATATTTTTGCC 59.303 34.615 0.00 0.00 0.00 4.52
7142 7616 5.982516 TGCATTATTGACGATATTTTTGCCC 59.017 36.000 0.00 0.00 0.00 5.36
7143 7617 5.982516 GCATTATTGACGATATTTTTGCCCA 59.017 36.000 0.00 0.00 0.00 5.36
7144 7618 6.074356 GCATTATTGACGATATTTTTGCCCAC 60.074 38.462 0.00 0.00 0.00 4.61
7145 7619 3.859411 TTGACGATATTTTTGCCCACC 57.141 42.857 0.00 0.00 0.00 4.61
7146 7620 2.096248 TGACGATATTTTTGCCCACCC 58.904 47.619 0.00 0.00 0.00 4.61
7147 7621 2.291282 TGACGATATTTTTGCCCACCCT 60.291 45.455 0.00 0.00 0.00 4.34
7148 7622 2.758423 GACGATATTTTTGCCCACCCTT 59.242 45.455 0.00 0.00 0.00 3.95
7149 7623 2.758423 ACGATATTTTTGCCCACCCTTC 59.242 45.455 0.00 0.00 0.00 3.46
7233 7707 0.193574 TCAAGGTCAACTCCCTCCCT 59.806 55.000 0.00 0.00 0.00 4.20
7235 7709 0.547954 AAGGTCAACTCCCTCCCTCC 60.548 60.000 0.00 0.00 0.00 4.30
7281 7949 4.081642 TGTCGCTTCTAAAATAGGAGTGCT 60.082 41.667 2.03 0.00 40.88 4.40
7358 8026 0.473755 AGTGAACATGGGCACTGACA 59.526 50.000 18.32 0.00 43.26 3.58
7525 8198 1.899814 ACGGCTCACATCTTACTCCAA 59.100 47.619 0.00 0.00 0.00 3.53
7529 8202 4.688021 GGCTCACATCTTACTCCAACTAG 58.312 47.826 0.00 0.00 0.00 2.57
7534 8207 3.952323 ACATCTTACTCCAACTAGCGCTA 59.048 43.478 17.75 17.75 0.00 4.26
7725 8399 2.568956 GCCCATCTGCCATCTCATACTA 59.431 50.000 0.00 0.00 0.00 1.82
7726 8400 3.618507 GCCCATCTGCCATCTCATACTAC 60.619 52.174 0.00 0.00 0.00 2.73
7727 8401 3.837146 CCCATCTGCCATCTCATACTACT 59.163 47.826 0.00 0.00 0.00 2.57
7859 8550 1.961277 GGCAGTGAACGTGTCCCTG 60.961 63.158 0.00 0.00 0.00 4.45
8286 8987 7.106204 ACCCTTTTATTACCCTTTGTCCTTA 57.894 36.000 0.00 0.00 0.00 2.69
8292 8993 2.556144 ACCCTTTGTCCTTACGGTTC 57.444 50.000 0.00 0.00 0.00 3.62
8317 9018 0.820891 CTGGTGTCTGGCACTGCTTT 60.821 55.000 12.66 0.00 46.86 3.51
8324 9025 0.953727 CTGGCACTGCTTTGCTGTTA 59.046 50.000 9.55 0.00 42.56 2.41
8333 9034 1.327303 CTTTGCTGTTAGCCCAACCA 58.673 50.000 0.00 0.00 41.51 3.67
8366 9075 6.817140 AGTTTGTATATCTGAAGGAACCGAAC 59.183 38.462 0.00 0.00 0.00 3.95
8388 9097 7.492352 AACTTGACTAAAGACACCATACAAC 57.508 36.000 0.00 0.00 39.38 3.32
8389 9098 6.827727 ACTTGACTAAAGACACCATACAACT 58.172 36.000 0.00 0.00 39.38 3.16
8390 9099 6.706270 ACTTGACTAAAGACACCATACAACTG 59.294 38.462 0.00 0.00 39.38 3.16
8391 9100 6.413783 TGACTAAAGACACCATACAACTGA 57.586 37.500 0.00 0.00 0.00 3.41
8393 9102 7.276658 TGACTAAAGACACCATACAACTGAAA 58.723 34.615 0.00 0.00 0.00 2.69
8394 9103 7.441157 TGACTAAAGACACCATACAACTGAAAG 59.559 37.037 0.00 0.00 42.29 2.62
8395 9104 7.506114 ACTAAAGACACCATACAACTGAAAGA 58.494 34.615 0.00 0.00 37.43 2.52
8404 9119 5.939883 CCATACAACTGAAAGATTGAGGTCA 59.060 40.000 0.00 0.00 37.43 4.02
8417 9132 3.979101 TGAGGTCATGCAGTAATGTCA 57.021 42.857 0.00 0.00 0.00 3.58
8420 9135 4.194640 GAGGTCATGCAGTAATGTCATGT 58.805 43.478 19.55 7.65 38.82 3.21
8469 9184 3.222603 CCACTTTGAAGGCTAGGTTTGT 58.777 45.455 0.00 0.00 0.00 2.83
8549 9268 0.591170 CAAAAACACTGATCGGCGGT 59.409 50.000 7.21 0.00 36.21 5.68
8557 9276 2.098607 CACTGATCGGCGGTTTAGTCTA 59.901 50.000 7.21 0.00 32.46 2.59
8564 9283 3.194116 TCGGCGGTTTAGTCTAGTTTGAT 59.806 43.478 7.21 0.00 0.00 2.57
8597 9317 0.178975 AATGGGACCCGTTTTCTGCA 60.179 50.000 12.63 0.00 26.45 4.41
8599 9319 0.893270 TGGGACCCGTTTTCTGCATG 60.893 55.000 5.91 0.00 0.00 4.06
8879 9607 3.099170 ATGGATTGGGGCGAGCCT 61.099 61.111 14.33 0.00 36.10 4.58
8948 9676 1.174078 TCCCGCTGTCGTTGTAGTCA 61.174 55.000 0.00 0.00 0.00 3.41
9041 9780 4.355720 CCTTGGGCCTGCTGCAGA 62.356 66.667 30.10 7.99 43.89 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 5.373812 ACCGGATTGGAGATTGTCTTAAT 57.626 39.130 9.46 0.00 42.00 1.40
11 12 4.344102 CCTACCGGATTGGAGATTGTCTTA 59.656 45.833 9.46 0.00 42.00 2.10
30 31 3.905968 ACCTAGCCTTCTTCTCTCCTAC 58.094 50.000 0.00 0.00 0.00 3.18
34 35 3.055458 AGCAAACCTAGCCTTCTTCTCTC 60.055 47.826 0.00 0.00 0.00 3.20
43 44 3.256281 GCTTGAGCAAACCTAGCCT 57.744 52.632 0.00 0.00 41.59 4.58
56 57 3.569194 TGGGTAAAGTCTTGTGCTTGA 57.431 42.857 0.00 0.00 0.00 3.02
68 69 8.765219 CACGTATCTCTATGAAATTGGGTAAAG 58.235 37.037 0.00 0.00 0.00 1.85
71 72 7.591421 TCACGTATCTCTATGAAATTGGGTA 57.409 36.000 0.00 0.00 0.00 3.69
73 74 7.657354 TCAATCACGTATCTCTATGAAATTGGG 59.343 37.037 0.00 0.00 0.00 4.12
87 90 4.506838 GTGAGTTGCTCAATCACGTATC 57.493 45.455 0.00 0.00 42.46 2.24
109 112 6.208599 TCAACCAAATTATTCTGGAGTTGGAC 59.791 38.462 9.24 0.00 38.20 4.02
120 123 5.577945 CCACATGTGCTCAACCAAATTATTC 59.422 40.000 20.81 0.00 0.00 1.75
124 127 2.964464 TCCACATGTGCTCAACCAAATT 59.036 40.909 20.81 0.00 0.00 1.82
126 129 1.680735 GTCCACATGTGCTCAACCAAA 59.319 47.619 20.81 0.00 0.00 3.28
145 148 0.981183 TATCGGTTGCCAAGGTGAGT 59.019 50.000 0.00 0.00 0.00 3.41
161 164 5.059833 AGAAAAGGAACCGATGCATCTATC 58.940 41.667 23.73 17.25 0.00 2.08
169 172 4.218417 ACATTGGAAGAAAAGGAACCGATG 59.782 41.667 0.00 0.00 43.90 3.84
172 175 5.897377 ATACATTGGAAGAAAAGGAACCG 57.103 39.130 0.00 0.00 0.00 4.44
255 258 9.378551 ACATCACGTAGTTTTACATGACAATAT 57.621 29.630 0.00 0.00 41.61 1.28
263 266 8.556213 ACCAAATACATCACGTAGTTTTACAT 57.444 30.769 0.00 0.00 41.61 2.29
274 277 6.607689 ACATTACACAACCAAATACATCACG 58.392 36.000 0.00 0.00 0.00 4.35
304 307 8.848182 TGCACAACATTTTCATGCATATATCTA 58.152 29.630 0.00 0.00 41.18 1.98
358 362 3.489738 GCTCAATCGGTTGATCCATTTGG 60.490 47.826 12.35 0.00 43.08 3.28
366 370 0.391661 AGTGCGCTCAATCGGTTGAT 60.392 50.000 12.35 0.00 43.08 2.57
370 374 3.121030 GCAGTGCGCTCAATCGGT 61.121 61.111 9.73 0.00 37.77 4.69
372 376 2.097160 GTGCAGTGCGCTCAATCG 59.903 61.111 21.31 0.00 43.06 3.34
386 390 1.654137 CGCCTGTGTTTTCGTGTGC 60.654 57.895 0.00 0.00 0.00 4.57
388 392 2.713154 GCGCCTGTGTTTTCGTGT 59.287 55.556 0.00 0.00 0.00 4.49
422 427 2.139917 TGTCCGTTTGAATCGGTCAAG 58.860 47.619 13.69 0.00 46.85 3.02
428 433 7.240674 TGATCTTATTTTGTCCGTTTGAATCG 58.759 34.615 0.00 0.00 0.00 3.34
431 436 9.026074 GTTTTGATCTTATTTTGTCCGTTTGAA 57.974 29.630 0.00 0.00 0.00 2.69
432 437 7.650104 GGTTTTGATCTTATTTTGTCCGTTTGA 59.350 33.333 0.00 0.00 0.00 2.69
436 441 5.695818 CGGTTTTGATCTTATTTTGTCCGT 58.304 37.500 0.00 0.00 0.00 4.69
437 442 4.557301 GCGGTTTTGATCTTATTTTGTCCG 59.443 41.667 0.00 0.00 36.78 4.79
439 444 6.308041 GGAAGCGGTTTTGATCTTATTTTGTC 59.692 38.462 0.00 0.00 0.00 3.18
440 445 6.156519 GGAAGCGGTTTTGATCTTATTTTGT 58.843 36.000 0.00 0.00 0.00 2.83
441 446 6.089417 GTGGAAGCGGTTTTGATCTTATTTTG 59.911 38.462 0.00 0.00 0.00 2.44
445 450 3.374058 CGTGGAAGCGGTTTTGATCTTAT 59.626 43.478 0.00 0.00 0.00 1.73
446 451 2.739913 CGTGGAAGCGGTTTTGATCTTA 59.260 45.455 0.00 0.00 0.00 2.10
447 452 1.535462 CGTGGAAGCGGTTTTGATCTT 59.465 47.619 0.00 0.00 0.00 2.40
448 453 1.156736 CGTGGAAGCGGTTTTGATCT 58.843 50.000 0.00 0.00 0.00 2.75
461 466 4.323477 CTCCAACGGGGCGTGGAA 62.323 66.667 0.00 0.00 39.99 3.53
465 470 4.636435 CCAACTCCAACGGGGCGT 62.636 66.667 0.00 0.00 43.97 5.68
468 480 2.132089 TAAGGCCAACTCCAACGGGG 62.132 60.000 5.01 0.00 38.37 5.73
470 482 1.065418 AGATAAGGCCAACTCCAACGG 60.065 52.381 5.01 0.00 0.00 4.44
481 493 3.054361 TCAACAAAGGGAGAGATAAGGCC 60.054 47.826 0.00 0.00 0.00 5.19
492 504 4.884668 ATCTTCTACGTCAACAAAGGGA 57.115 40.909 0.00 0.00 0.00 4.20
495 507 8.339714 TGGTAAAAATCTTCTACGTCAACAAAG 58.660 33.333 0.00 0.00 0.00 2.77
498 510 7.211573 TCTGGTAAAAATCTTCTACGTCAACA 58.788 34.615 0.00 0.00 0.00 3.33
499 511 7.621633 GCTCTGGTAAAAATCTTCTACGTCAAC 60.622 40.741 0.00 0.00 0.00 3.18
501 513 5.867716 GCTCTGGTAAAAATCTTCTACGTCA 59.132 40.000 0.00 0.00 0.00 4.35
502 514 6.100668 AGCTCTGGTAAAAATCTTCTACGTC 58.899 40.000 0.00 0.00 0.00 4.34
503 515 6.038997 AGCTCTGGTAAAAATCTTCTACGT 57.961 37.500 0.00 0.00 0.00 3.57
504 516 8.543774 CATTAGCTCTGGTAAAAATCTTCTACG 58.456 37.037 0.00 0.00 0.00 3.51
505 517 9.601217 TCATTAGCTCTGGTAAAAATCTTCTAC 57.399 33.333 0.00 0.00 0.00 2.59
508 520 9.943163 GAATCATTAGCTCTGGTAAAAATCTTC 57.057 33.333 0.00 0.00 0.00 2.87
509 521 9.466497 TGAATCATTAGCTCTGGTAAAAATCTT 57.534 29.630 0.00 0.00 0.00 2.40
511 523 8.897752 AGTGAATCATTAGCTCTGGTAAAAATC 58.102 33.333 0.00 0.00 0.00 2.17
512 524 8.680903 CAGTGAATCATTAGCTCTGGTAAAAAT 58.319 33.333 0.00 0.00 0.00 1.82
515 527 6.946340 TCAGTGAATCATTAGCTCTGGTAAA 58.054 36.000 0.00 0.00 0.00 2.01
516 528 6.544928 TCAGTGAATCATTAGCTCTGGTAA 57.455 37.500 0.00 0.00 0.00 2.85
517 529 5.452496 GCTCAGTGAATCATTAGCTCTGGTA 60.452 44.000 0.00 0.00 0.00 3.25
518 530 4.682859 GCTCAGTGAATCATTAGCTCTGGT 60.683 45.833 0.00 0.00 0.00 4.00
519 531 3.808726 GCTCAGTGAATCATTAGCTCTGG 59.191 47.826 0.00 0.00 0.00 3.86
520 532 4.270566 GTGCTCAGTGAATCATTAGCTCTG 59.729 45.833 13.06 3.73 0.00 3.35
521 533 4.081254 TGTGCTCAGTGAATCATTAGCTCT 60.081 41.667 13.06 0.00 0.00 4.09
522 534 4.186926 TGTGCTCAGTGAATCATTAGCTC 58.813 43.478 13.06 10.73 0.00 4.09
523 535 4.212143 TGTGCTCAGTGAATCATTAGCT 57.788 40.909 13.06 0.00 0.00 3.32
524 536 4.024218 GGATGTGCTCAGTGAATCATTAGC 60.024 45.833 5.20 7.27 0.00 3.09
525 537 5.236695 CAGGATGTGCTCAGTGAATCATTAG 59.763 44.000 5.20 0.00 0.00 1.73
557 579 4.077822 AGGATGTGCTCAGAAAAAGAAGG 58.922 43.478 0.00 0.00 0.00 3.46
561 583 3.439476 CAGGAGGATGTGCTCAGAAAAAG 59.561 47.826 3.94 0.00 0.00 2.27
567 589 1.761198 TGATCAGGAGGATGTGCTCAG 59.239 52.381 3.94 0.00 36.00 3.35
568 590 1.483827 GTGATCAGGAGGATGTGCTCA 59.516 52.381 0.00 0.00 36.00 4.26
580 602 1.349026 ACTGGGTGAAGTGTGATCAGG 59.651 52.381 0.00 0.00 0.00 3.86
581 603 2.847327 ACTGGGTGAAGTGTGATCAG 57.153 50.000 0.00 0.00 0.00 2.90
583 605 3.126001 TGAACTGGGTGAAGTGTGATC 57.874 47.619 0.00 0.00 0.00 2.92
585 607 2.547855 CGATGAACTGGGTGAAGTGTGA 60.548 50.000 0.00 0.00 0.00 3.58
680 702 1.595382 GTATGCCGCTACCTGCCTG 60.595 63.158 0.00 0.00 38.78 4.85
681 703 2.063979 TGTATGCCGCTACCTGCCT 61.064 57.895 0.00 0.00 38.78 4.75
700 728 0.806102 GATGACGATGTGGACGTGGG 60.806 60.000 0.00 0.00 43.97 4.61
821 849 3.587933 GTGGCCAACGGTTCGCAA 61.588 61.111 7.24 0.00 0.00 4.85
972 1000 4.986531 CGTGCGTGCGGACAAACG 62.987 66.667 15.13 15.13 42.61 3.60
1224 1255 0.453950 CTGCGAACGTGCGTAGTAGT 60.454 55.000 24.17 0.00 38.83 2.73
1225 1256 1.730593 GCTGCGAACGTGCGTAGTAG 61.731 60.000 30.70 18.31 44.24 2.57
1226 1257 1.798725 GCTGCGAACGTGCGTAGTA 60.799 57.895 30.70 9.57 44.24 1.82
1284 1316 2.716217 AGCTAAGCTTAACAAGGGCTG 58.284 47.619 13.17 0.00 33.89 4.85
1402 1438 2.357952 GGTTGCCGTTCTCCCATATTTC 59.642 50.000 0.00 0.00 0.00 2.17
1403 1439 2.291282 TGGTTGCCGTTCTCCCATATTT 60.291 45.455 0.00 0.00 0.00 1.40
1442 1495 3.245048 CGAAAACAAGGTGCATTTGGTTC 59.755 43.478 14.98 15.11 34.53 3.62
1476 1529 3.810386 TGTACAGCAGTAATGCGTTTTGA 59.190 39.130 15.41 0.00 40.27 2.69
1529 1582 4.865905 AGAGTATAGGAGATCATGGCGAT 58.134 43.478 0.00 0.00 36.91 4.58
1541 1594 6.374417 AGAAAAGGTTGCAAGAGTATAGGA 57.626 37.500 0.00 0.00 0.00 2.94
2058 2118 9.443323 GAGGAAAATAGGAAGCTTCTTATATCC 57.557 37.037 31.44 31.44 36.58 2.59
2133 2200 6.346096 TGAAGATTTGTTATACCCTTCGAGG 58.654 40.000 0.00 0.00 34.42 4.63
2212 2279 9.564041 CATAGTTAACGCGTTTTATGTAGATTC 57.436 33.333 31.50 5.86 0.00 2.52
2366 2451 7.063544 CCTTTTCTATCGGAAGTCAAACTACTG 59.936 40.741 0.00 0.00 35.16 2.74
2381 2468 4.685169 TTTCTGCAAGCCTTTTCTATCG 57.315 40.909 0.00 0.00 0.00 2.92
2387 2474 4.278419 AGTCGTTATTTCTGCAAGCCTTTT 59.722 37.500 0.00 0.00 0.00 2.27
2391 2478 3.309954 CCTAGTCGTTATTTCTGCAAGCC 59.690 47.826 0.00 0.00 0.00 4.35
2424 2511 1.186200 GGGAAAATGGGAAGCTGACC 58.814 55.000 0.00 0.00 0.00 4.02
2619 2710 5.276489 CGTTGCGTCTCTACTGTGTTAAAAA 60.276 40.000 0.00 0.00 0.00 1.94
2620 2711 4.207635 CGTTGCGTCTCTACTGTGTTAAAA 59.792 41.667 0.00 0.00 0.00 1.52
2622 2713 3.302555 CGTTGCGTCTCTACTGTGTTAA 58.697 45.455 0.00 0.00 0.00 2.01
2623 2714 2.919387 GCGTTGCGTCTCTACTGTGTTA 60.919 50.000 0.00 0.00 0.00 2.41
2624 2715 1.767289 CGTTGCGTCTCTACTGTGTT 58.233 50.000 0.00 0.00 0.00 3.32
2625 2716 0.663568 GCGTTGCGTCTCTACTGTGT 60.664 55.000 0.00 0.00 0.00 3.72
2626 2717 0.387367 AGCGTTGCGTCTCTACTGTG 60.387 55.000 0.00 0.00 0.00 3.66
2627 2718 0.109689 GAGCGTTGCGTCTCTACTGT 60.110 55.000 0.00 0.00 31.32 3.55
2628 2719 0.109735 TGAGCGTTGCGTCTCTACTG 60.110 55.000 11.70 0.00 33.64 2.74
2629 2720 0.811915 ATGAGCGTTGCGTCTCTACT 59.188 50.000 11.70 0.00 33.64 2.57
2630 2721 2.470196 TATGAGCGTTGCGTCTCTAC 57.530 50.000 11.70 0.00 33.64 2.59
2631 2722 3.562557 TGTATATGAGCGTTGCGTCTCTA 59.437 43.478 11.70 5.39 33.64 2.43
2632 2723 2.357952 TGTATATGAGCGTTGCGTCTCT 59.642 45.455 11.70 0.00 33.64 3.10
2633 2724 2.468040 GTGTATATGAGCGTTGCGTCTC 59.532 50.000 0.00 0.00 33.30 3.36
2634 2725 2.460918 GTGTATATGAGCGTTGCGTCT 58.539 47.619 0.00 0.00 0.00 4.18
2635 2726 1.187271 CGTGTATATGAGCGTTGCGTC 59.813 52.381 0.00 0.00 0.00 5.19
2636 2727 1.197055 CGTGTATATGAGCGTTGCGT 58.803 50.000 0.00 0.00 0.00 5.24
2637 2728 1.072154 CACGTGTATATGAGCGTTGCG 60.072 52.381 7.58 0.00 35.25 4.85
2638 2729 1.332028 GCACGTGTATATGAGCGTTGC 60.332 52.381 18.38 0.00 35.25 4.17
2639 2730 1.923864 TGCACGTGTATATGAGCGTTG 59.076 47.619 18.38 0.00 35.25 4.10
2640 2731 2.287393 TGCACGTGTATATGAGCGTT 57.713 45.000 18.38 0.00 35.25 4.84
2641 2732 2.509052 ATGCACGTGTATATGAGCGT 57.491 45.000 18.03 0.00 38.14 5.07
2642 2733 3.119628 GTGTATGCACGTGTATATGAGCG 59.880 47.826 25.81 0.00 35.75 5.03
2643 2734 4.631133 GTGTATGCACGTGTATATGAGC 57.369 45.455 25.81 15.09 35.75 4.26
2655 2746 2.434336 TCATAGGGGTGAGTGTATGCAC 59.566 50.000 5.71 5.71 45.57 4.57
2656 2747 2.758130 TCATAGGGGTGAGTGTATGCA 58.242 47.619 0.00 0.00 0.00 3.96
2657 2748 3.838244 TTCATAGGGGTGAGTGTATGC 57.162 47.619 0.00 0.00 0.00 3.14
2658 2749 4.067896 GCATTCATAGGGGTGAGTGTATG 58.932 47.826 0.00 0.00 37.92 2.39
2659 2750 3.244215 CGCATTCATAGGGGTGAGTGTAT 60.244 47.826 0.00 0.00 37.92 2.29
2660 2751 2.102420 CGCATTCATAGGGGTGAGTGTA 59.898 50.000 0.00 0.00 37.92 2.90
2661 2752 1.134401 CGCATTCATAGGGGTGAGTGT 60.134 52.381 0.00 0.00 37.92 3.55
2662 2753 1.586422 CGCATTCATAGGGGTGAGTG 58.414 55.000 0.00 0.00 38.45 3.51
2663 2754 0.179045 GCGCATTCATAGGGGTGAGT 60.179 55.000 0.30 0.00 0.00 3.41
2664 2755 1.224069 CGCGCATTCATAGGGGTGAG 61.224 60.000 8.75 0.00 31.13 3.51
2665 2756 1.227527 CGCGCATTCATAGGGGTGA 60.228 57.895 8.75 0.00 31.13 4.02
2666 2757 2.896801 GCGCGCATTCATAGGGGTG 61.897 63.158 29.10 0.00 0.00 4.61
2667 2758 2.591715 GCGCGCATTCATAGGGGT 60.592 61.111 29.10 0.00 0.00 4.95
2668 2759 2.591429 TGCGCGCATTCATAGGGG 60.591 61.111 33.09 0.00 0.00 4.79
2669 2760 2.179547 TGTGCGCGCATTCATAGGG 61.180 57.895 38.62 0.00 0.00 3.53
2670 2761 1.010797 GTGTGCGCGCATTCATAGG 60.011 57.895 38.62 0.00 0.00 2.57
2671 2762 0.587242 GTGTGTGCGCGCATTCATAG 60.587 55.000 38.62 0.00 37.46 2.23
2672 2763 1.294659 TGTGTGTGCGCGCATTCATA 61.295 50.000 38.62 29.91 37.46 2.15
2673 2764 2.176546 GTGTGTGCGCGCATTCAT 59.823 55.556 38.62 0.00 37.46 2.57
2674 2765 3.275338 TGTGTGTGCGCGCATTCA 61.275 55.556 38.62 32.16 37.46 2.57
2675 2766 2.796617 GTGTGTGTGCGCGCATTC 60.797 61.111 38.62 30.06 37.46 2.67
2676 2767 4.326766 GGTGTGTGTGCGCGCATT 62.327 61.111 38.62 0.00 37.46 3.56
2680 2771 3.411351 GTAGGGTGTGTGTGCGCG 61.411 66.667 0.00 0.00 0.00 6.86
2681 2772 3.047877 GGTAGGGTGTGTGTGCGC 61.048 66.667 0.00 0.00 0.00 6.09
2682 2773 1.374252 GAGGTAGGGTGTGTGTGCG 60.374 63.158 0.00 0.00 0.00 5.34
2683 2774 1.067071 GTAGAGGTAGGGTGTGTGTGC 60.067 57.143 0.00 0.00 0.00 4.57
2684 2775 1.201647 CGTAGAGGTAGGGTGTGTGTG 59.798 57.143 0.00 0.00 0.00 3.82
2685 2776 1.074405 TCGTAGAGGTAGGGTGTGTGT 59.926 52.381 0.00 0.00 0.00 3.72
2686 2777 1.830279 TCGTAGAGGTAGGGTGTGTG 58.170 55.000 0.00 0.00 0.00 3.82
2704 2795 0.603569 TCAGTCTTTCCGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
2705 2796 0.605589 CTCAGTCTTTCCGAGGTGCT 59.394 55.000 0.00 0.00 0.00 4.40
2706 2797 1.016653 GCTCAGTCTTTCCGAGGTGC 61.017 60.000 0.00 0.00 0.00 5.01
2707 2798 0.390472 GGCTCAGTCTTTCCGAGGTG 60.390 60.000 0.00 0.00 0.00 4.00
2708 2799 1.878656 CGGCTCAGTCTTTCCGAGGT 61.879 60.000 0.00 0.00 44.23 3.85
2709 2800 1.153745 CGGCTCAGTCTTTCCGAGG 60.154 63.158 0.00 0.00 44.23 4.63
2710 2801 1.883732 TCGGCTCAGTCTTTCCGAG 59.116 57.895 0.00 0.00 44.99 4.63
2712 2803 0.108615 ATGTCGGCTCAGTCTTTCCG 60.109 55.000 0.00 0.00 42.96 4.30
2713 2804 2.961526 TATGTCGGCTCAGTCTTTCC 57.038 50.000 0.00 0.00 0.00 3.13
2714 2805 4.046938 TGATATGTCGGCTCAGTCTTTC 57.953 45.455 0.00 0.00 0.00 2.62
2715 2806 4.343526 AGATGATATGTCGGCTCAGTCTTT 59.656 41.667 0.00 0.00 0.00 2.52
2716 2807 3.894427 AGATGATATGTCGGCTCAGTCTT 59.106 43.478 0.00 0.00 0.00 3.01
2717 2808 3.495331 AGATGATATGTCGGCTCAGTCT 58.505 45.455 0.00 0.00 0.00 3.24
2718 2809 3.932545 AGATGATATGTCGGCTCAGTC 57.067 47.619 0.00 0.00 0.00 3.51
2719 2810 3.638627 TCAAGATGATATGTCGGCTCAGT 59.361 43.478 0.00 0.00 0.00 3.41
2720 2811 4.248691 TCAAGATGATATGTCGGCTCAG 57.751 45.455 0.00 0.00 0.00 3.35
2721 2812 4.670896 TTCAAGATGATATGTCGGCTCA 57.329 40.909 0.00 0.00 0.00 4.26
2722 2813 6.551385 AATTTCAAGATGATATGTCGGCTC 57.449 37.500 0.00 0.00 0.00 4.70
2723 2814 6.949352 AAATTTCAAGATGATATGTCGGCT 57.051 33.333 0.00 0.00 0.00 5.52
2724 2815 8.506437 TCATAAATTTCAAGATGATATGTCGGC 58.494 33.333 0.00 0.00 0.00 5.54
2732 2823 8.400947 CGGTGACTTCATAAATTTCAAGATGAT 58.599 33.333 0.00 0.00 0.00 2.45
2733 2824 7.390440 ACGGTGACTTCATAAATTTCAAGATGA 59.610 33.333 0.00 0.00 0.00 2.92
2734 2825 7.530010 ACGGTGACTTCATAAATTTCAAGATG 58.470 34.615 0.00 0.00 0.00 2.90
2735 2826 7.687941 ACGGTGACTTCATAAATTTCAAGAT 57.312 32.000 0.00 0.00 0.00 2.40
2736 2827 7.333423 CCTACGGTGACTTCATAAATTTCAAGA 59.667 37.037 0.00 0.00 0.00 3.02
2737 2828 7.464358 CCTACGGTGACTTCATAAATTTCAAG 58.536 38.462 0.00 0.00 0.00 3.02
2738 2829 6.128117 GCCTACGGTGACTTCATAAATTTCAA 60.128 38.462 0.00 0.00 0.00 2.69
2739 2830 5.353123 GCCTACGGTGACTTCATAAATTTCA 59.647 40.000 0.00 0.00 0.00 2.69
2740 2831 5.353123 TGCCTACGGTGACTTCATAAATTTC 59.647 40.000 0.00 0.00 0.00 2.17
2741 2832 5.123344 GTGCCTACGGTGACTTCATAAATTT 59.877 40.000 0.00 0.00 0.00 1.82
2742 2833 4.634443 GTGCCTACGGTGACTTCATAAATT 59.366 41.667 0.00 0.00 0.00 1.82
2743 2834 4.189231 GTGCCTACGGTGACTTCATAAAT 58.811 43.478 0.00 0.00 0.00 1.40
2744 2835 3.592059 GTGCCTACGGTGACTTCATAAA 58.408 45.455 0.00 0.00 0.00 1.40
2745 2836 2.093869 GGTGCCTACGGTGACTTCATAA 60.094 50.000 0.00 0.00 0.00 1.90
2746 2837 1.479323 GGTGCCTACGGTGACTTCATA 59.521 52.381 0.00 0.00 0.00 2.15
2747 2838 0.249398 GGTGCCTACGGTGACTTCAT 59.751 55.000 0.00 0.00 0.00 2.57
2748 2839 0.830444 AGGTGCCTACGGTGACTTCA 60.830 55.000 0.00 0.00 0.00 3.02
2749 2840 0.108756 GAGGTGCCTACGGTGACTTC 60.109 60.000 0.00 0.00 0.00 3.01
2750 2841 1.874345 CGAGGTGCCTACGGTGACTT 61.874 60.000 0.00 0.00 0.00 3.01
2751 2842 2.341101 CGAGGTGCCTACGGTGACT 61.341 63.158 0.00 0.00 0.00 3.41
2752 2843 2.181021 CGAGGTGCCTACGGTGAC 59.819 66.667 0.00 0.00 0.00 3.67
2753 2844 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
2754 2845 2.181021 GACGAGGTGCCTACGGTG 59.819 66.667 12.22 0.00 0.00 4.94
2755 2846 3.437795 CGACGAGGTGCCTACGGT 61.438 66.667 12.22 3.01 0.00 4.83
2756 2847 3.392595 GACGACGAGGTGCCTACGG 62.393 68.421 0.00 1.18 0.00 4.02
2757 2848 2.099831 GACGACGAGGTGCCTACG 59.900 66.667 0.00 9.22 0.00 3.51
2758 2849 2.099831 CGACGACGAGGTGCCTAC 59.900 66.667 0.00 0.00 42.66 3.18
2759 2850 2.046988 TCGACGACGAGGTGCCTA 60.047 61.111 5.75 0.00 43.81 3.93
2776 2867 7.233883 ATTCAGTGGAAAGAGACGTTCTCGT 62.234 44.000 0.00 0.00 44.11 4.18
2777 2868 4.852619 ATTCAGTGGAAAGAGACGTTCTCG 60.853 45.833 0.00 0.00 40.53 4.04
2778 2869 3.644884 TCAGTGGAAAGAGACGTTCTC 57.355 47.619 6.85 6.85 43.70 2.87
2779 2870 4.310769 CATTCAGTGGAAAGAGACGTTCT 58.689 43.478 0.00 0.00 36.43 3.01
2780 2871 3.120511 GCATTCAGTGGAAAGAGACGTTC 60.121 47.826 0.00 0.00 36.43 3.95
2781 2872 2.808543 GCATTCAGTGGAAAGAGACGTT 59.191 45.455 0.00 0.00 36.43 3.99
2782 2873 2.417719 GCATTCAGTGGAAAGAGACGT 58.582 47.619 0.00 0.00 36.43 4.34
2783 2874 1.391485 CGCATTCAGTGGAAAGAGACG 59.609 52.381 0.00 0.00 36.43 4.18
2784 2875 1.129437 GCGCATTCAGTGGAAAGAGAC 59.871 52.381 0.30 0.00 36.43 3.36
2785 2876 1.270785 TGCGCATTCAGTGGAAAGAGA 60.271 47.619 5.66 0.00 36.43 3.10
2786 2877 1.159285 TGCGCATTCAGTGGAAAGAG 58.841 50.000 5.66 0.00 36.43 2.85
2787 2878 1.739466 GATGCGCATTCAGTGGAAAGA 59.261 47.619 26.12 0.00 36.43 2.52
2788 2879 1.530441 CGATGCGCATTCAGTGGAAAG 60.530 52.381 26.12 2.60 36.43 2.62
2789 2880 0.447406 CGATGCGCATTCAGTGGAAA 59.553 50.000 26.12 0.00 36.43 3.13
2790 2881 2.089017 CGATGCGCATTCAGTGGAA 58.911 52.632 26.12 0.00 37.45 3.53
2791 2882 3.798380 CGATGCGCATTCAGTGGA 58.202 55.556 26.12 0.00 0.00 4.02
2802 2893 4.240103 TGGGAGGATGGCGATGCG 62.240 66.667 0.00 0.00 0.00 4.73
2803 2894 2.592861 GTGGGAGGATGGCGATGC 60.593 66.667 0.00 0.00 0.00 3.91
2804 2895 1.227764 CAGTGGGAGGATGGCGATG 60.228 63.158 0.00 0.00 0.00 3.84
2805 2896 0.982852 TTCAGTGGGAGGATGGCGAT 60.983 55.000 0.00 0.00 0.00 4.58
2806 2897 0.982852 ATTCAGTGGGAGGATGGCGA 60.983 55.000 0.00 0.00 0.00 5.54
2807 2898 0.816825 CATTCAGTGGGAGGATGGCG 60.817 60.000 0.00 0.00 0.00 5.69
2808 2899 1.105759 GCATTCAGTGGGAGGATGGC 61.106 60.000 0.00 0.00 0.00 4.40
2809 2900 0.816825 CGCATTCAGTGGGAGGATGG 60.817 60.000 0.00 0.00 43.02 3.51
2810 2901 1.442526 GCGCATTCAGTGGGAGGATG 61.443 60.000 0.30 0.00 43.02 3.51
2811 2902 1.153086 GCGCATTCAGTGGGAGGAT 60.153 57.895 0.30 0.00 43.02 3.24
2812 2903 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
2813 2904 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
2814 2905 0.745486 TGATGCGCATTCAGTGGGAG 60.745 55.000 26.12 0.00 43.02 4.30
2815 2906 0.107066 ATGATGCGCATTCAGTGGGA 60.107 50.000 26.12 1.80 43.02 4.37
2816 2907 0.309922 GATGATGCGCATTCAGTGGG 59.690 55.000 26.12 0.00 43.21 4.61
2817 2908 1.002792 CTGATGATGCGCATTCAGTGG 60.003 52.381 30.86 15.89 37.34 4.00
2818 2909 1.937899 TCTGATGATGCGCATTCAGTG 59.062 47.619 34.42 21.22 37.34 3.66
2819 2910 2.320745 TCTGATGATGCGCATTCAGT 57.679 45.000 34.42 19.66 37.34 3.41
2820 2911 3.685836 TTTCTGATGATGCGCATTCAG 57.314 42.857 32.36 32.36 37.34 3.02
2821 2912 4.337274 AGAATTTCTGATGATGCGCATTCA 59.663 37.500 26.12 22.81 37.34 2.57
2822 2913 4.856664 AGAATTTCTGATGATGCGCATTC 58.143 39.130 26.12 19.28 37.34 2.67
2823 2914 4.913335 AGAATTTCTGATGATGCGCATT 57.087 36.364 26.12 9.76 37.34 3.56
2844 2935 9.236691 GCTCGCATTTATTCTTGAATTATTTCA 57.763 29.630 0.95 0.00 40.09 2.69
2845 2936 9.236691 TGCTCGCATTTATTCTTGAATTATTTC 57.763 29.630 0.95 0.00 0.00 2.17
2846 2937 9.754382 ATGCTCGCATTTATTCTTGAATTATTT 57.246 25.926 0.00 0.00 31.82 1.40
2847 2938 9.403110 GATGCTCGCATTTATTCTTGAATTATT 57.597 29.630 5.79 0.00 36.70 1.40
2848 2939 8.570488 TGATGCTCGCATTTATTCTTGAATTAT 58.430 29.630 5.79 0.00 36.70 1.28
2849 2940 7.929159 TGATGCTCGCATTTATTCTTGAATTA 58.071 30.769 5.79 0.00 36.70 1.40
2850 2941 6.798482 TGATGCTCGCATTTATTCTTGAATT 58.202 32.000 5.79 0.00 36.70 2.17
2851 2942 6.381481 TGATGCTCGCATTTATTCTTGAAT 57.619 33.333 5.79 1.35 36.70 2.57
2852 2943 5.220912 CCTGATGCTCGCATTTATTCTTGAA 60.221 40.000 5.79 0.00 36.70 2.69
2853 2944 4.274214 CCTGATGCTCGCATTTATTCTTGA 59.726 41.667 5.79 0.00 36.70 3.02
2854 2945 4.274214 TCCTGATGCTCGCATTTATTCTTG 59.726 41.667 5.79 0.00 36.70 3.02
2855 2946 4.274459 GTCCTGATGCTCGCATTTATTCTT 59.726 41.667 5.79 0.00 36.70 2.52
2856 2947 3.812053 GTCCTGATGCTCGCATTTATTCT 59.188 43.478 5.79 0.00 36.70 2.40
2857 2948 3.812053 AGTCCTGATGCTCGCATTTATTC 59.188 43.478 5.79 0.00 36.70 1.75
2858 2949 3.813443 AGTCCTGATGCTCGCATTTATT 58.187 40.909 5.79 0.00 36.70 1.40
2859 2950 3.482156 AGTCCTGATGCTCGCATTTAT 57.518 42.857 5.79 0.00 36.70 1.40
2860 2951 2.938451 CAAGTCCTGATGCTCGCATTTA 59.062 45.455 5.79 0.00 36.70 1.40
2861 2952 1.741706 CAAGTCCTGATGCTCGCATTT 59.258 47.619 5.79 0.00 36.70 2.32
2862 2953 1.065926 TCAAGTCCTGATGCTCGCATT 60.066 47.619 5.79 0.00 36.70 3.56
2863 2954 0.538584 TCAAGTCCTGATGCTCGCAT 59.461 50.000 3.70 3.70 39.69 4.73
2864 2955 0.321346 TTCAAGTCCTGATGCTCGCA 59.679 50.000 0.00 0.00 32.78 5.10
2865 2956 1.129437 GTTTCAAGTCCTGATGCTCGC 59.871 52.381 0.00 0.00 32.78 5.03
2866 2957 1.734465 GGTTTCAAGTCCTGATGCTCG 59.266 52.381 0.00 0.00 32.78 5.03
2867 2958 3.064900 AGGTTTCAAGTCCTGATGCTC 57.935 47.619 0.00 0.00 32.78 4.26
2874 2965 1.272147 GCCCATCAGGTTTCAAGTCCT 60.272 52.381 0.00 0.00 38.26 3.85
2875 2966 1.177401 GCCCATCAGGTTTCAAGTCC 58.823 55.000 0.00 0.00 38.26 3.85
2876 2967 1.815003 CAGCCCATCAGGTTTCAAGTC 59.185 52.381 0.00 0.00 38.26 3.01
2877 2968 1.548582 CCAGCCCATCAGGTTTCAAGT 60.549 52.381 0.00 0.00 38.26 3.16
2878 2969 1.180029 CCAGCCCATCAGGTTTCAAG 58.820 55.000 0.00 0.00 38.26 3.02
2879 2970 0.251742 CCCAGCCCATCAGGTTTCAA 60.252 55.000 0.00 0.00 38.26 2.69
2880 2971 1.139498 TCCCAGCCCATCAGGTTTCA 61.139 55.000 0.00 0.00 38.26 2.69
2881 2972 0.039618 TTCCCAGCCCATCAGGTTTC 59.960 55.000 0.00 0.00 38.26 2.78
2882 2973 0.712380 ATTCCCAGCCCATCAGGTTT 59.288 50.000 0.00 0.00 38.26 3.27
2883 2974 1.215423 GTATTCCCAGCCCATCAGGTT 59.785 52.381 0.00 0.00 38.26 3.50
2884 2975 0.846693 GTATTCCCAGCCCATCAGGT 59.153 55.000 0.00 0.00 38.26 4.00
2885 2976 0.111253 GGTATTCCCAGCCCATCAGG 59.889 60.000 0.00 0.00 39.47 3.86
2886 2977 0.846015 TGGTATTCCCAGCCCATCAG 59.154 55.000 0.00 0.00 38.72 2.90
2887 2978 0.550914 GTGGTATTCCCAGCCCATCA 59.449 55.000 0.00 0.00 46.45 3.07
2888 2979 0.550914 TGTGGTATTCCCAGCCCATC 59.449 55.000 0.00 0.00 46.45 3.51
2889 2980 0.552848 CTGTGGTATTCCCAGCCCAT 59.447 55.000 0.00 0.00 46.45 4.00
2890 2981 0.844661 ACTGTGGTATTCCCAGCCCA 60.845 55.000 6.73 0.00 46.45 5.36
2891 2982 0.107165 GACTGTGGTATTCCCAGCCC 60.107 60.000 6.73 0.00 46.45 5.19
2892 2983 0.107165 GGACTGTGGTATTCCCAGCC 60.107 60.000 6.73 5.99 46.45 4.85
2893 2984 0.107165 GGGACTGTGGTATTCCCAGC 60.107 60.000 0.76 1.96 46.45 4.85
2896 2987 1.880941 AGAGGGACTGTGGTATTCCC 58.119 55.000 0.00 0.00 46.22 3.97
2897 2988 3.134262 GGTTAGAGGGACTGTGGTATTCC 59.866 52.174 0.00 0.00 41.55 3.01
2898 2989 3.773119 TGGTTAGAGGGACTGTGGTATTC 59.227 47.826 0.00 0.00 41.55 1.75
2899 2990 3.798515 TGGTTAGAGGGACTGTGGTATT 58.201 45.455 0.00 0.00 41.55 1.89
2900 2991 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
2901 2992 3.263369 TTGGTTAGAGGGACTGTGGTA 57.737 47.619 0.00 0.00 41.55 3.25
2902 2993 2.105993 GTTTGGTTAGAGGGACTGTGGT 59.894 50.000 0.00 0.00 41.55 4.16
2903 2994 2.372172 AGTTTGGTTAGAGGGACTGTGG 59.628 50.000 0.00 0.00 41.55 4.17
2904 2995 3.771577 AGTTTGGTTAGAGGGACTGTG 57.228 47.619 0.00 0.00 41.55 3.66
2905 2996 4.079958 ACAAAGTTTGGTTAGAGGGACTGT 60.080 41.667 19.45 0.00 34.13 3.55
2906 2997 4.461198 ACAAAGTTTGGTTAGAGGGACTG 58.539 43.478 19.45 0.00 34.13 3.51
2907 2998 4.790718 ACAAAGTTTGGTTAGAGGGACT 57.209 40.909 19.45 0.00 36.49 3.85
2908 2999 5.240183 GGTAACAAAGTTTGGTTAGAGGGAC 59.760 44.000 19.45 6.27 30.70 4.46
2909 3000 5.379187 GGTAACAAAGTTTGGTTAGAGGGA 58.621 41.667 19.45 0.00 30.70 4.20
2910 3001 4.214758 CGGTAACAAAGTTTGGTTAGAGGG 59.785 45.833 19.45 0.00 30.70 4.30
2911 3002 4.319984 GCGGTAACAAAGTTTGGTTAGAGG 60.320 45.833 19.45 3.57 30.70 3.69
2912 3003 4.514066 AGCGGTAACAAAGTTTGGTTAGAG 59.486 41.667 19.45 7.05 30.70 2.43
2913 3004 4.453751 AGCGGTAACAAAGTTTGGTTAGA 58.546 39.130 19.45 0.00 30.70 2.10
2918 3009 2.095415 GGCTAGCGGTAACAAAGTTTGG 60.095 50.000 19.45 2.78 34.12 3.28
3009 3113 1.891150 AGGGTTGCAATCAGCTTCAAG 59.109 47.619 12.67 0.00 45.94 3.02
3046 3150 5.605534 CTGGAGAAACTGGATATGGTACTG 58.394 45.833 0.00 0.00 0.00 2.74
3073 3177 4.455877 AGGATTCTTTCGTTGTTGACATCC 59.544 41.667 0.00 0.00 0.00 3.51
3085 3192 5.977725 ACGACATGTATGTAGGATTCTTTCG 59.022 40.000 0.00 0.00 41.95 3.46
3102 3209 6.194796 AGATTAAAACATTGGGACGACATG 57.805 37.500 0.00 0.00 0.00 3.21
3181 3297 9.353431 TGATGTATGATGCCAACTAATATTTGT 57.647 29.630 0.00 0.00 0.00 2.83
3191 3307 3.057736 GGAGCATGATGTATGATGCCAAC 60.058 47.826 11.76 5.35 46.53 3.77
3228 3344 1.425412 TTAACGGCGTTTCTGCTCTC 58.575 50.000 31.53 0.00 34.52 3.20
3281 3397 2.697425 CAAAGCAGTCGCCGATCG 59.303 61.111 8.51 8.51 39.83 3.69
3437 3557 2.103094 CTGAATTGACGCCTCTATCCCA 59.897 50.000 0.00 0.00 0.00 4.37
3614 3749 2.614013 AAGGTGGGCCTGGGGTAG 60.614 66.667 4.53 0.00 46.33 3.18
3650 3785 3.795150 GCATGAGGTGAACTTCGCAAAAA 60.795 43.478 0.00 0.00 0.00 1.94
3651 3786 2.287547 GCATGAGGTGAACTTCGCAAAA 60.288 45.455 0.00 0.00 0.00 2.44
3652 3787 1.266718 GCATGAGGTGAACTTCGCAAA 59.733 47.619 0.00 0.00 0.00 3.68
3653 3788 0.874390 GCATGAGGTGAACTTCGCAA 59.126 50.000 0.00 0.00 0.00 4.85
3654 3789 0.250252 TGCATGAGGTGAACTTCGCA 60.250 50.000 0.00 0.00 0.00 5.10
3655 3790 0.166814 GTGCATGAGGTGAACTTCGC 59.833 55.000 0.00 0.00 33.17 4.70
3656 3791 0.798776 GGTGCATGAGGTGAACTTCG 59.201 55.000 0.00 0.00 36.53 3.79
3657 3792 1.808945 CAGGTGCATGAGGTGAACTTC 59.191 52.381 0.00 0.00 36.53 3.01
3658 3793 1.546323 CCAGGTGCATGAGGTGAACTT 60.546 52.381 0.00 0.00 36.53 2.66
3659 3794 0.037303 CCAGGTGCATGAGGTGAACT 59.963 55.000 0.00 0.00 36.53 3.01
3660 3795 0.962356 CCCAGGTGCATGAGGTGAAC 60.962 60.000 0.00 0.00 35.43 3.18
3661 3796 1.379916 CCCAGGTGCATGAGGTGAA 59.620 57.895 0.00 0.00 0.00 3.18
3662 3797 3.080641 CCCAGGTGCATGAGGTGA 58.919 61.111 0.00 0.00 0.00 4.02
3663 3798 2.753043 GCCCAGGTGCATGAGGTG 60.753 66.667 0.00 0.00 0.00 4.00
3664 3799 2.776370 CTTGCCCAGGTGCATGAGGT 62.776 60.000 0.00 0.00 41.70 3.85
3665 3800 2.036098 TTGCCCAGGTGCATGAGG 59.964 61.111 0.00 0.00 41.70 3.86
3666 3801 2.707849 GCTTGCCCAGGTGCATGAG 61.708 63.158 15.73 8.03 41.70 2.90
3667 3802 2.677524 GCTTGCCCAGGTGCATGA 60.678 61.111 15.73 0.00 41.70 3.07
3668 3803 4.124351 CGCTTGCCCAGGTGCATG 62.124 66.667 3.68 7.27 41.70 4.06
3688 3834 4.751340 GCAGTACTATCTCAGATCCCCAGA 60.751 50.000 0.00 0.00 0.00 3.86
3705 3851 1.187087 AGTGCCTAGTGGAGCAGTAC 58.813 55.000 0.00 0.00 40.81 2.73
3713 3859 1.826024 CCTGCCTAGTGCCTAGTGG 59.174 63.158 8.01 4.60 40.16 4.00
3783 3932 3.869140 ACTAGGTCTAGAGTGTGGACACG 60.869 52.174 11.55 0.00 42.42 4.49
3858 4007 5.468540 TGCTTCTAGAGAAAGCTTGTACA 57.531 39.130 14.42 0.00 33.07 2.90
3863 4012 5.647225 CAGGAAATGCTTCTAGAGAAAGCTT 59.353 40.000 14.42 6.90 33.07 3.74
3877 4026 8.424133 GGAATCAAATAAATACCAGGAAATGCT 58.576 33.333 0.00 0.00 0.00 3.79
4020 4175 0.381089 GATCACAATGGCAGCAGCTC 59.619 55.000 0.00 0.00 41.70 4.09
4069 4234 4.261031 GCAACGAAAGAAGTTAGCAAAGGA 60.261 41.667 0.00 0.00 0.00 3.36
4070 4235 3.975035 GCAACGAAAGAAGTTAGCAAAGG 59.025 43.478 0.00 0.00 0.00 3.11
4072 4237 3.630312 AGGCAACGAAAGAAGTTAGCAAA 59.370 39.130 0.00 0.00 46.39 3.68
4118 4290 0.042131 TCCCCTGACGGATTACTGGT 59.958 55.000 0.00 0.00 0.00 4.00
4129 4301 2.239681 TTTCTCTCCTCTCCCCTGAC 57.760 55.000 0.00 0.00 0.00 3.51
4151 4337 3.306818 GTTCGCGACTCTACTCTTTTGT 58.693 45.455 9.15 0.00 0.00 2.83
4269 4455 0.601311 AAGAATCTATCGCTGCCGCC 60.601 55.000 0.00 0.00 0.00 6.13
4532 4734 0.030638 AGAGCGTGCGCAAACAAATT 59.969 45.000 14.00 0.00 44.88 1.82
4533 4735 0.385974 GAGAGCGTGCGCAAACAAAT 60.386 50.000 14.00 0.00 44.88 2.32
4534 4736 1.010125 GAGAGCGTGCGCAAACAAA 60.010 52.632 14.00 0.00 44.88 2.83
4535 4737 2.631428 GAGAGCGTGCGCAAACAA 59.369 55.556 14.00 0.00 44.88 2.83
4574 4776 1.004504 GCCATGCGAATTTCGAGAGAC 60.005 52.381 22.25 4.84 43.74 3.36
4620 4842 0.654160 CACACACACACTCACAGCAG 59.346 55.000 0.00 0.00 0.00 4.24
4649 4871 4.307908 GTTGCCGTCGCCACACAC 62.308 66.667 0.00 0.00 31.03 3.82
4650 4872 2.646117 TTAGTTGCCGTCGCCACACA 62.646 55.000 0.00 0.00 33.09 3.72
4651 4873 1.296056 ATTAGTTGCCGTCGCCACAC 61.296 55.000 0.00 0.00 33.09 3.82
4652 4874 0.604243 AATTAGTTGCCGTCGCCACA 60.604 50.000 0.00 0.00 33.09 4.17
4653 4875 0.519961 AAATTAGTTGCCGTCGCCAC 59.480 50.000 0.00 0.00 0.00 5.01
4654 4876 0.519519 CAAATTAGTTGCCGTCGCCA 59.480 50.000 0.00 0.00 0.00 5.69
4655 4877 0.179174 CCAAATTAGTTGCCGTCGCC 60.179 55.000 0.00 0.00 35.74 5.54
4773 5000 1.352352 CAGGACAGGAACAGGATTGGT 59.648 52.381 0.00 0.00 0.00 3.67
4805 5032 4.022413 TCGAACCAACCAAACCATCATA 57.978 40.909 0.00 0.00 0.00 2.15
4953 5228 6.232692 ACAACATTTTATGGCTGAAGCAAAT 58.767 32.000 4.43 0.00 44.36 2.32
4954 5229 5.609423 ACAACATTTTATGGCTGAAGCAAA 58.391 33.333 4.43 0.00 44.36 3.68
4956 5231 4.523943 AGACAACATTTTATGGCTGAAGCA 59.476 37.500 4.43 0.00 44.36 3.91
4957 5232 5.064441 AGACAACATTTTATGGCTGAAGC 57.936 39.130 0.00 0.00 32.39 3.86
4958 5233 5.416952 AGGAGACAACATTTTATGGCTGAAG 59.583 40.000 0.00 0.00 34.25 3.02
4999 5278 5.700832 CCAAATCTACACAACAACTAGAGCA 59.299 40.000 0.00 0.00 0.00 4.26
5205 5495 2.743928 GCGACAAGCTGTCCCCTG 60.744 66.667 9.71 0.00 44.20 4.45
5258 5555 1.226746 GTAGTGCAGTGGTGGTTGTC 58.773 55.000 3.69 0.00 0.00 3.18
5267 5564 2.066262 CTTTGGTACGGTAGTGCAGTG 58.934 52.381 3.69 0.00 34.50 3.66
5272 5569 3.714391 GCCTATCTTTGGTACGGTAGTG 58.286 50.000 0.00 0.00 0.00 2.74
5290 5597 0.179000 CTTGAGATTGCCTACCGCCT 59.821 55.000 0.00 0.00 36.24 5.52
5503 5829 1.813178 GCTAGGACAACAGAAAAGGGC 59.187 52.381 0.00 0.00 0.00 5.19
5518 5844 8.345702 AACGTCAAGTTATCCTAGCTGCTAGG 62.346 46.154 38.38 38.38 46.36 3.02
5519 5845 4.036971 ACGTCAAGTTATCCTAGCTGCTAG 59.963 45.833 26.08 26.08 34.16 3.42
5567 5893 7.256286 CAGAGGAGAGGAAAAATAAAATGCTG 58.744 38.462 0.00 0.00 0.00 4.41
5672 6022 0.390340 GATGGCAGCAACTGAGACGA 60.390 55.000 0.00 0.00 32.44 4.20
5947 6303 2.184579 GGAGTACCACGCAGAGCC 59.815 66.667 0.00 0.00 35.97 4.70
5991 6356 0.325602 GGTGGTCCACGGATTGGTAA 59.674 55.000 15.93 0.00 46.97 2.85
6009 6374 2.945008 ACACGCATTAATCTGTGATGGG 59.055 45.455 18.69 4.93 39.00 4.00
6045 6417 0.454452 CTTTCGTAAAAGGCAGGCGC 60.454 55.000 0.00 0.00 38.59 6.53
6046 6418 1.128692 CTCTTTCGTAAAAGGCAGGCG 59.871 52.381 0.00 0.00 41.88 5.52
6047 6419 2.152016 ACTCTTTCGTAAAAGGCAGGC 58.848 47.619 0.00 0.00 41.88 4.85
6049 6421 4.537015 CCAAACTCTTTCGTAAAAGGCAG 58.463 43.478 0.00 0.00 41.88 4.85
6050 6422 3.243267 GCCAAACTCTTTCGTAAAAGGCA 60.243 43.478 0.00 0.00 41.88 4.75
6051 6423 3.305964 GCCAAACTCTTTCGTAAAAGGC 58.694 45.455 0.00 0.00 41.88 4.35
6052 6424 3.551551 CGCCAAACTCTTTCGTAAAAGG 58.448 45.455 0.00 0.00 41.88 3.11
6053 6425 2.971261 GCGCCAAACTCTTTCGTAAAAG 59.029 45.455 0.00 0.00 42.77 2.27
6054 6426 2.355132 TGCGCCAAACTCTTTCGTAAAA 59.645 40.909 4.18 0.00 0.00 1.52
6055 6427 1.941294 TGCGCCAAACTCTTTCGTAAA 59.059 42.857 4.18 0.00 0.00 2.01
6056 6428 1.584175 TGCGCCAAACTCTTTCGTAA 58.416 45.000 4.18 0.00 0.00 3.18
6057 6429 1.803334 ATGCGCCAAACTCTTTCGTA 58.197 45.000 4.18 0.00 0.00 3.43
6075 6447 6.821665 GGATACGGCCAAACATATGTATGTAT 59.178 38.462 9.21 10.55 45.55 2.29
6146 6526 1.645704 TACTGCGAGACTCCGTGCTC 61.646 60.000 0.00 0.00 0.00 4.26
6209 6611 3.950395 ACAGTATTACCGTCTCCCTGTAC 59.050 47.826 0.00 0.00 30.45 2.90
6232 6634 3.324117 CACGGATGATCAGATGTGGATC 58.676 50.000 13.39 0.00 41.20 3.36
6240 6645 0.832626 ATGTGGCACGGATGATCAGA 59.167 50.000 13.77 0.00 0.00 3.27
6246 6651 2.114670 GTGGGATGTGGCACGGATG 61.115 63.158 13.77 0.00 0.00 3.51
6370 6782 2.281276 ACCACCGGCGGTTTCTTC 60.281 61.111 32.12 0.00 34.91 2.87
6416 6831 1.615392 GGAGTTGATTATGGGCCATGC 59.385 52.381 29.14 17.51 0.00 4.06
6417 6832 3.234234 AGGAGTTGATTATGGGCCATG 57.766 47.619 29.14 0.00 0.00 3.66
6418 6833 3.748668 CGAAGGAGTTGATTATGGGCCAT 60.749 47.826 24.69 24.69 0.00 4.40
6433 6848 3.823330 CCCGACCCGACGAAGGAG 61.823 72.222 0.00 0.00 35.09 3.69
6474 6889 6.459848 CCAAACCAAATTACCGACTAAACACA 60.460 38.462 0.00 0.00 0.00 3.72
6543 6973 1.154338 CAGAAAGGCGAGCAAAGCG 60.154 57.895 0.00 0.00 35.00 4.68
6574 7004 0.038744 AGAAGGAACCGGAGACCGTA 59.961 55.000 9.46 0.00 46.80 4.02
6577 7007 1.511768 CGAGAAGGAACCGGAGACC 59.488 63.158 9.46 8.45 0.00 3.85
6620 7052 2.224402 GGGAGAGAGAGAGAGAGAGAGC 60.224 59.091 0.00 0.00 0.00 4.09
6664 7100 3.319198 GACCTGTCTCCGGCCCAA 61.319 66.667 0.00 0.00 0.00 4.12
6732 7180 1.901948 TGATAGGCGGAGTAGGCGG 60.902 63.158 0.00 0.00 41.99 6.13
6743 7191 4.849111 GCTGATAATAAGCGTGATAGGC 57.151 45.455 0.00 0.00 0.00 3.93
6765 7213 5.853282 CGCATAAACAAATATAAGCAGAGGC 59.147 40.000 0.00 0.00 41.61 4.70
6767 7215 6.576313 CAGCGCATAAACAAATATAAGCAGAG 59.424 38.462 11.47 0.00 0.00 3.35
6799 7247 4.813161 CAGTGGTTAGTGATAAGCAGATGG 59.187 45.833 0.47 0.00 38.00 3.51
6910 7368 1.888512 CCACCAGGTCAATCAACCAAG 59.111 52.381 0.00 0.00 42.12 3.61
6944 7411 1.288419 CGCGAACACCATGTACTGCA 61.288 55.000 0.00 0.00 0.00 4.41
7104 7578 2.286365 AATGCACTTCGGGGAAAAGA 57.714 45.000 0.00 0.00 0.00 2.52
7105 7579 4.157656 TCAATAATGCACTTCGGGGAAAAG 59.842 41.667 0.00 0.00 0.00 2.27
7106 7580 4.082463 GTCAATAATGCACTTCGGGGAAAA 60.082 41.667 0.00 0.00 0.00 2.29
7116 7590 6.697019 GGCAAAAATATCGTCAATAATGCACT 59.303 34.615 0.00 0.00 0.00 4.40
7137 7611 1.342474 TGACAAAAGAAGGGTGGGCAA 60.342 47.619 0.00 0.00 0.00 4.52
7138 7612 0.260230 TGACAAAAGAAGGGTGGGCA 59.740 50.000 0.00 0.00 0.00 5.36
7139 7613 1.068588 GTTGACAAAAGAAGGGTGGGC 59.931 52.381 0.00 0.00 0.00 5.36
7140 7614 2.666317 AGTTGACAAAAGAAGGGTGGG 58.334 47.619 0.00 0.00 0.00 4.61
7141 7615 4.204012 TGTAGTTGACAAAAGAAGGGTGG 58.796 43.478 0.00 0.00 34.15 4.61
7142 7616 5.123227 TCTGTAGTTGACAAAAGAAGGGTG 58.877 41.667 0.00 0.00 37.70 4.61
7143 7617 5.367945 TCTGTAGTTGACAAAAGAAGGGT 57.632 39.130 0.00 0.00 37.70 4.34
7144 7618 5.588648 TGTTCTGTAGTTGACAAAAGAAGGG 59.411 40.000 0.00 0.00 37.70 3.95
7145 7619 6.677781 TGTTCTGTAGTTGACAAAAGAAGG 57.322 37.500 0.00 0.00 37.70 3.46
7146 7620 7.752695 ACTTGTTCTGTAGTTGACAAAAGAAG 58.247 34.615 0.00 0.59 42.39 2.85
7147 7621 7.681939 ACTTGTTCTGTAGTTGACAAAAGAA 57.318 32.000 0.00 0.00 37.70 2.52
7148 7622 7.009815 CGTACTTGTTCTGTAGTTGACAAAAGA 59.990 37.037 0.00 0.00 37.70 2.52
7149 7623 7.117454 CGTACTTGTTCTGTAGTTGACAAAAG 58.883 38.462 0.00 0.00 37.70 2.27
7233 7707 3.076785 ACCAGAGAAAGAAGAGAGAGGGA 59.923 47.826 0.00 0.00 0.00 4.20
7235 7709 3.368323 GCACCAGAGAAAGAAGAGAGAGG 60.368 52.174 0.00 0.00 0.00 3.69
7358 8026 4.778213 TCAGGCCATGCTCTAAAATACT 57.222 40.909 5.01 0.00 0.00 2.12
7525 8198 1.138661 AGAGACGGTAGTAGCGCTAGT 59.861 52.381 26.86 26.86 43.79 2.57
7529 8202 1.648174 GGAGAGACGGTAGTAGCGC 59.352 63.158 20.97 13.61 43.79 5.92
7534 8207 1.209990 ACTGATCGGAGAGACGGTAGT 59.790 52.381 9.00 0.00 43.63 2.73
7572 8245 2.508526 GAAGTGGCTGACAAGACCAAT 58.491 47.619 0.00 0.00 33.29 3.16
7725 8399 7.425224 AATAGGAGTACTGTATGAGCAAAGT 57.575 36.000 0.00 0.00 0.00 2.66
7726 8400 7.596995 GCTAATAGGAGTACTGTATGAGCAAAG 59.403 40.741 18.71 1.46 0.00 2.77
7727 8401 7.069455 TGCTAATAGGAGTACTGTATGAGCAAA 59.931 37.037 21.76 8.33 31.99 3.68
7859 8550 0.537653 GGTAGGTCAGGAGGTTCTGC 59.462 60.000 0.00 0.00 34.91 4.26
8286 8987 0.608640 GACACCAGATGGAGAACCGT 59.391 55.000 5.72 0.00 39.42 4.83
8292 8993 0.392193 GTGCCAGACACCAGATGGAG 60.392 60.000 5.72 0.00 44.02 3.86
8317 9018 1.133637 TCTTTGGTTGGGCTAACAGCA 60.134 47.619 15.85 2.41 44.75 4.41
8324 9025 2.755952 ACTCTTTCTTTGGTTGGGCT 57.244 45.000 0.00 0.00 0.00 5.19
8366 9075 6.929049 TCAGTTGTATGGTGTCTTTAGTCAAG 59.071 38.462 0.00 0.00 0.00 3.02
8388 9097 4.008330 ACTGCATGACCTCAATCTTTCAG 58.992 43.478 0.00 0.00 0.00 3.02
8389 9098 4.025040 ACTGCATGACCTCAATCTTTCA 57.975 40.909 0.00 0.00 0.00 2.69
8390 9099 6.094603 ACATTACTGCATGACCTCAATCTTTC 59.905 38.462 0.00 0.00 0.00 2.62
8391 9100 5.948162 ACATTACTGCATGACCTCAATCTTT 59.052 36.000 0.00 0.00 0.00 2.52
8393 9102 5.108187 ACATTACTGCATGACCTCAATCT 57.892 39.130 0.00 0.00 0.00 2.40
8394 9103 4.877823 TGACATTACTGCATGACCTCAATC 59.122 41.667 0.00 0.00 0.00 2.67
8395 9104 4.847198 TGACATTACTGCATGACCTCAAT 58.153 39.130 0.00 0.00 0.00 2.57
8404 9119 9.102757 CTCTTAGTAAACATGACATTACTGCAT 57.897 33.333 22.09 8.39 41.25 3.96
8495 9210 6.235664 ACCGTAGACATGGTGTTTTCTTTAT 58.764 36.000 0.00 0.00 42.80 1.40
8498 9214 4.081322 ACCGTAGACATGGTGTTTTCTT 57.919 40.909 0.00 0.00 42.80 2.52
8549 9268 7.756272 TCATAAACGCGATCAAACTAGACTAAA 59.244 33.333 15.93 0.00 0.00 1.85
8557 9276 5.351233 TTTGTCATAAACGCGATCAAACT 57.649 34.783 15.93 0.00 0.00 2.66
8564 9283 2.417239 GTCCCATTTGTCATAAACGCGA 59.583 45.455 15.93 0.00 0.00 5.87
8597 9317 2.535094 ACGAAACGTTATGCCACGCAT 61.535 47.619 0.00 4.31 44.37 4.73
8599 9319 0.787908 CACGAAACGTTATGCCACGC 60.788 55.000 0.00 0.00 44.37 5.34
8743 9471 4.069232 CCCAGCCAGCGACGAGAA 62.069 66.667 0.00 0.00 0.00 2.87
8879 9607 1.375853 CGCCGCCAAGATCCAAATCA 61.376 55.000 0.00 0.00 34.07 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.