Multiple sequence alignment - TraesCS3D01G222500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G222500 chr3D 100.000 3028 0 0 1 3028 303482608 303479581 0.000000e+00 5592
1 TraesCS3D01G222500 chr3D 94.453 667 34 2 2365 3028 241395837 241396503 0.000000e+00 1024
2 TraesCS3D01G222500 chr3D 94.726 474 25 0 1 474 238671201 238671674 0.000000e+00 737
3 TraesCS3D01G222500 chr2D 93.732 2489 128 11 471 2949 197522668 197520198 0.000000e+00 3707
4 TraesCS3D01G222500 chr2D 95.359 474 22 0 1 474 401143531 401143058 0.000000e+00 754
5 TraesCS3D01G222500 chr2D 95.148 474 23 0 1 474 3414451 3413978 0.000000e+00 749
6 TraesCS3D01G222500 chr2D 88.182 110 13 0 2919 3028 197520192 197520083 6.810000e-27 132
7 TraesCS3D01G222500 chr5A 93.207 2488 143 12 471 2949 670476032 670473562 0.000000e+00 3635
8 TraesCS3D01G222500 chr5A 91.677 2487 178 13 471 2949 696328131 696325666 0.000000e+00 3419
9 TraesCS3D01G222500 chr1A 92.961 2486 151 10 471 2949 374208503 374210971 0.000000e+00 3600
10 TraesCS3D01G222500 chr1A 92.725 2488 154 12 471 2949 449450785 449453254 0.000000e+00 3567
11 TraesCS3D01G222500 chr3A 92.159 2487 157 13 471 2949 1716080 1713624 0.000000e+00 3478
12 TraesCS3D01G222500 chr3A 93.432 1629 96 9 1405 3028 218169215 218167593 0.000000e+00 2405
13 TraesCS3D01G222500 chr3A 93.559 885 54 2 471 1352 218191342 218190458 0.000000e+00 1315
14 TraesCS3D01G222500 chr5D 93.723 1641 76 7 471 2104 51806035 51804415 0.000000e+00 2435
15 TraesCS3D01G222500 chr5D 93.991 932 53 3 2099 3028 51750724 51749794 0.000000e+00 1408
16 TraesCS3D01G222500 chr5D 94.937 474 24 0 1 474 74035535 74035062 0.000000e+00 743
17 TraesCS3D01G222500 chr5D 94.726 474 25 0 1 474 284868838 284869311 0.000000e+00 737
18 TraesCS3D01G222500 chr2B 92.560 1613 81 17 1445 3028 634220827 634222429 0.000000e+00 2278
19 TraesCS3D01G222500 chr2B 86.726 113 15 0 2913 3025 142890239 142890351 3.170000e-25 126
20 TraesCS3D01G222500 chr7A 94.780 862 41 3 471 1328 206574192 206575053 0.000000e+00 1339
21 TraesCS3D01G222500 chr5B 94.432 862 41 5 471 1328 701465561 701466419 0.000000e+00 1319
22 TraesCS3D01G222500 chr2A 89.242 1069 86 17 1360 2414 648156005 648157058 0.000000e+00 1310
23 TraesCS3D01G222500 chr3B 93.871 669 37 3 2364 3028 338595884 338596552 0.000000e+00 1005
24 TraesCS3D01G222500 chr7D 94.937 474 23 1 1 474 468892095 468892567 0.000000e+00 741
25 TraesCS3D01G222500 chr7D 94.726 474 25 0 1 474 366779937 366780410 0.000000e+00 737
26 TraesCS3D01G222500 chr6D 94.726 474 24 1 1 474 370507262 370506790 0.000000e+00 736
27 TraesCS3D01G222500 chr6D 94.515 474 26 0 1 474 379252880 379253353 0.000000e+00 732


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G222500 chr3D 303479581 303482608 3027 True 5592.0 5592 100.000 1 3028 1 chr3D.!!$R1 3027
1 TraesCS3D01G222500 chr3D 241395837 241396503 666 False 1024.0 1024 94.453 2365 3028 1 chr3D.!!$F2 663
2 TraesCS3D01G222500 chr2D 197520083 197522668 2585 True 1919.5 3707 90.957 471 3028 2 chr2D.!!$R3 2557
3 TraesCS3D01G222500 chr5A 670473562 670476032 2470 True 3635.0 3635 93.207 471 2949 1 chr5A.!!$R1 2478
4 TraesCS3D01G222500 chr5A 696325666 696328131 2465 True 3419.0 3419 91.677 471 2949 1 chr5A.!!$R2 2478
5 TraesCS3D01G222500 chr1A 374208503 374210971 2468 False 3600.0 3600 92.961 471 2949 1 chr1A.!!$F1 2478
6 TraesCS3D01G222500 chr1A 449450785 449453254 2469 False 3567.0 3567 92.725 471 2949 1 chr1A.!!$F2 2478
7 TraesCS3D01G222500 chr3A 1713624 1716080 2456 True 3478.0 3478 92.159 471 2949 1 chr3A.!!$R1 2478
8 TraesCS3D01G222500 chr3A 218167593 218169215 1622 True 2405.0 2405 93.432 1405 3028 1 chr3A.!!$R2 1623
9 TraesCS3D01G222500 chr3A 218190458 218191342 884 True 1315.0 1315 93.559 471 1352 1 chr3A.!!$R3 881
10 TraesCS3D01G222500 chr5D 51804415 51806035 1620 True 2435.0 2435 93.723 471 2104 1 chr5D.!!$R2 1633
11 TraesCS3D01G222500 chr5D 51749794 51750724 930 True 1408.0 1408 93.991 2099 3028 1 chr5D.!!$R1 929
12 TraesCS3D01G222500 chr2B 634220827 634222429 1602 False 2278.0 2278 92.560 1445 3028 1 chr2B.!!$F2 1583
13 TraesCS3D01G222500 chr7A 206574192 206575053 861 False 1339.0 1339 94.780 471 1328 1 chr7A.!!$F1 857
14 TraesCS3D01G222500 chr5B 701465561 701466419 858 False 1319.0 1319 94.432 471 1328 1 chr5B.!!$F1 857
15 TraesCS3D01G222500 chr2A 648156005 648157058 1053 False 1310.0 1310 89.242 1360 2414 1 chr2A.!!$F1 1054
16 TraesCS3D01G222500 chr3B 338595884 338596552 668 False 1005.0 1005 93.871 2364 3028 1 chr3B.!!$F1 664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 295 0.031994 CAAAGGACAGGCCAAAACGG 59.968 55.0 5.01 0.0 40.02 4.44 F
421 422 0.321653 GGTGGACCAGTGCTTAGGTG 60.322 60.0 0.00 0.0 38.50 4.00 F
1343 1350 0.464916 GTGTGTTTCCACCGACCCTT 60.465 55.0 0.00 0.0 41.09 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1335 1341 0.390472 GAGCACTCAAGAAGGGTCGG 60.390 60.000 0.0 0.0 0.00 4.79 R
1908 1950 3.003275 CGTAGTGCCTTTGCTTTTTCTGA 59.997 43.478 0.0 0.0 38.71 3.27 R
2599 2686 0.178915 TTCTCCACTCCTTCCCCGAA 60.179 55.000 0.0 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.489679 CCACTTACCAAAGAAGCTTCAC 57.510 45.455 27.57 2.86 36.50 3.18
22 23 3.253432 CCACTTACCAAAGAAGCTTCACC 59.747 47.826 27.57 2.05 36.50 4.02
23 24 3.253432 CACTTACCAAAGAAGCTTCACCC 59.747 47.826 27.57 1.65 36.50 4.61
24 25 2.579410 TACCAAAGAAGCTTCACCCC 57.421 50.000 27.57 1.24 0.00 4.95
25 26 0.853530 ACCAAAGAAGCTTCACCCCT 59.146 50.000 27.57 4.18 0.00 4.79
26 27 1.202940 ACCAAAGAAGCTTCACCCCTC 60.203 52.381 27.57 0.00 0.00 4.30
27 28 1.160137 CAAAGAAGCTTCACCCCTCG 58.840 55.000 27.57 5.56 0.00 4.63
28 29 1.056660 AAAGAAGCTTCACCCCTCGA 58.943 50.000 27.57 0.00 0.00 4.04
29 30 0.321996 AAGAAGCTTCACCCCTCGAC 59.678 55.000 27.57 0.00 0.00 4.20
30 31 0.832135 AGAAGCTTCACCCCTCGACA 60.832 55.000 27.57 0.00 0.00 4.35
31 32 0.034896 GAAGCTTCACCCCTCGACAA 59.965 55.000 21.67 0.00 0.00 3.18
32 33 0.250338 AAGCTTCACCCCTCGACAAC 60.250 55.000 0.00 0.00 0.00 3.32
33 34 2.027625 GCTTCACCCCTCGACAACG 61.028 63.158 0.00 0.00 41.26 4.10
34 35 1.374252 CTTCACCCCTCGACAACGG 60.374 63.158 0.00 0.00 40.21 4.44
35 36 3.524648 TTCACCCCTCGACAACGGC 62.525 63.158 0.00 0.00 40.21 5.68
40 41 3.777925 CCTCGACAACGGCGCAAG 61.778 66.667 10.83 4.90 40.21 4.01
41 42 2.733218 CTCGACAACGGCGCAAGA 60.733 61.111 10.83 0.00 39.09 3.02
42 43 2.279584 TCGACAACGGCGCAAGAA 60.280 55.556 10.83 0.00 39.09 2.52
43 44 1.827315 CTCGACAACGGCGCAAGAAA 61.827 55.000 10.83 0.00 39.09 2.52
44 45 1.010574 CGACAACGGCGCAAGAAAA 60.011 52.632 10.83 0.00 41.00 2.29
45 46 0.385473 CGACAACGGCGCAAGAAAAT 60.385 50.000 10.83 0.00 41.00 1.82
46 47 1.136197 CGACAACGGCGCAAGAAAATA 60.136 47.619 10.83 0.00 41.00 1.40
47 48 2.505866 GACAACGGCGCAAGAAAATAG 58.494 47.619 10.83 0.00 43.02 1.73
48 49 1.259316 CAACGGCGCAAGAAAATAGC 58.741 50.000 10.83 0.00 43.02 2.97
49 50 0.170339 AACGGCGCAAGAAAATAGCC 59.830 50.000 10.83 0.00 44.00 3.93
50 51 0.676782 ACGGCGCAAGAAAATAGCCT 60.677 50.000 10.83 0.00 45.16 4.58
51 52 0.451783 CGGCGCAAGAAAATAGCCTT 59.548 50.000 10.83 0.00 45.16 4.35
52 53 1.795162 CGGCGCAAGAAAATAGCCTTG 60.795 52.381 10.83 0.00 45.16 3.61
53 54 1.472480 GGCGCAAGAAAATAGCCTTGA 59.528 47.619 10.83 0.00 44.06 3.02
54 55 2.519963 GCGCAAGAAAATAGCCTTGAC 58.480 47.619 0.30 0.00 41.56 3.18
55 56 2.774007 CGCAAGAAAATAGCCTTGACG 58.226 47.619 0.00 0.00 41.56 4.35
56 57 2.415168 CGCAAGAAAATAGCCTTGACGA 59.585 45.455 0.00 0.00 41.56 4.20
57 58 3.725010 CGCAAGAAAATAGCCTTGACGAC 60.725 47.826 0.00 0.00 41.56 4.34
58 59 3.426292 GCAAGAAAATAGCCTTGACGACC 60.426 47.826 0.00 0.00 41.56 4.79
59 60 2.987232 AGAAAATAGCCTTGACGACCC 58.013 47.619 0.00 0.00 0.00 4.46
60 61 2.304761 AGAAAATAGCCTTGACGACCCA 59.695 45.455 0.00 0.00 0.00 4.51
61 62 2.109425 AAATAGCCTTGACGACCCAC 57.891 50.000 0.00 0.00 0.00 4.61
62 63 0.981183 AATAGCCTTGACGACCCACA 59.019 50.000 0.00 0.00 0.00 4.17
63 64 0.981183 ATAGCCTTGACGACCCACAA 59.019 50.000 0.00 0.00 0.00 3.33
64 65 0.320374 TAGCCTTGACGACCCACAAG 59.680 55.000 0.00 0.00 41.85 3.16
65 66 1.227853 GCCTTGACGACCCACAAGT 60.228 57.895 0.00 0.00 40.98 3.16
66 67 0.034337 GCCTTGACGACCCACAAGTA 59.966 55.000 0.00 0.00 40.98 2.24
67 68 1.338769 GCCTTGACGACCCACAAGTAT 60.339 52.381 0.00 0.00 40.98 2.12
68 69 2.093869 GCCTTGACGACCCACAAGTATA 60.094 50.000 0.00 0.00 40.98 1.47
69 70 3.782046 CCTTGACGACCCACAAGTATAG 58.218 50.000 0.00 0.00 40.98 1.31
70 71 3.430374 CCTTGACGACCCACAAGTATAGG 60.430 52.174 0.00 0.00 40.98 2.57
79 80 5.324832 CCCACAAGTATAGGGGATCAATT 57.675 43.478 0.00 0.00 43.57 2.32
80 81 5.072741 CCCACAAGTATAGGGGATCAATTG 58.927 45.833 0.00 0.00 43.57 2.32
81 82 5.399038 CCCACAAGTATAGGGGATCAATTGT 60.399 44.000 5.13 0.00 43.57 2.71
82 83 6.183361 CCCACAAGTATAGGGGATCAATTGTA 60.183 42.308 5.13 0.00 43.57 2.41
83 84 6.936900 CCACAAGTATAGGGGATCAATTGTAG 59.063 42.308 5.13 0.00 0.00 2.74
84 85 6.428159 CACAAGTATAGGGGATCAATTGTAGC 59.572 42.308 5.13 0.00 0.00 3.58
85 86 6.330250 ACAAGTATAGGGGATCAATTGTAGCT 59.670 38.462 5.13 0.00 0.00 3.32
86 87 6.613153 AGTATAGGGGATCAATTGTAGCTC 57.387 41.667 5.13 0.00 0.00 4.09
87 88 6.326970 AGTATAGGGGATCAATTGTAGCTCT 58.673 40.000 5.13 2.52 0.00 4.09
88 89 6.789959 AGTATAGGGGATCAATTGTAGCTCTT 59.210 38.462 5.13 0.00 0.00 2.85
89 90 4.870021 AGGGGATCAATTGTAGCTCTTT 57.130 40.909 5.13 0.00 0.00 2.52
90 91 5.198602 AGGGGATCAATTGTAGCTCTTTT 57.801 39.130 5.13 0.00 0.00 2.27
91 92 5.196695 AGGGGATCAATTGTAGCTCTTTTC 58.803 41.667 5.13 0.00 0.00 2.29
92 93 4.035675 GGGGATCAATTGTAGCTCTTTTCG 59.964 45.833 5.13 0.00 0.00 3.46
93 94 4.876107 GGGATCAATTGTAGCTCTTTTCGA 59.124 41.667 5.13 0.00 0.00 3.71
94 95 5.529060 GGGATCAATTGTAGCTCTTTTCGAT 59.471 40.000 5.13 0.00 0.00 3.59
95 96 6.706270 GGGATCAATTGTAGCTCTTTTCGATA 59.294 38.462 5.13 0.00 0.00 2.92
96 97 7.226720 GGGATCAATTGTAGCTCTTTTCGATAA 59.773 37.037 5.13 0.00 0.00 1.75
97 98 8.279103 GGATCAATTGTAGCTCTTTTCGATAAG 58.721 37.037 9.11 9.11 0.00 1.73
98 99 8.723942 ATCAATTGTAGCTCTTTTCGATAAGT 57.276 30.769 14.15 0.00 0.00 2.24
99 100 9.817809 ATCAATTGTAGCTCTTTTCGATAAGTA 57.182 29.630 14.15 0.00 0.00 2.24
100 101 9.647797 TCAATTGTAGCTCTTTTCGATAAGTAA 57.352 29.630 14.15 0.00 0.00 2.24
101 102 9.907576 CAATTGTAGCTCTTTTCGATAAGTAAG 57.092 33.333 14.15 7.51 0.00 2.34
102 103 9.871238 AATTGTAGCTCTTTTCGATAAGTAAGA 57.129 29.630 14.15 5.28 0.00 2.10
103 104 8.912787 TTGTAGCTCTTTTCGATAAGTAAGAG 57.087 34.615 14.15 13.56 43.99 2.85
104 105 8.053026 TGTAGCTCTTTTCGATAAGTAAGAGT 57.947 34.615 14.15 8.01 43.39 3.24
105 106 7.968956 TGTAGCTCTTTTCGATAAGTAAGAGTG 59.031 37.037 14.15 0.00 43.39 3.51
106 107 6.926313 AGCTCTTTTCGATAAGTAAGAGTGT 58.074 36.000 14.15 4.97 43.39 3.55
107 108 7.030768 AGCTCTTTTCGATAAGTAAGAGTGTC 58.969 38.462 14.15 3.85 43.39 3.67
108 109 6.021311 GCTCTTTTCGATAAGTAAGAGTGTCG 60.021 42.308 14.15 0.00 43.39 4.35
109 110 7.137490 TCTTTTCGATAAGTAAGAGTGTCGA 57.863 36.000 14.15 0.00 36.46 4.20
110 111 7.587629 TCTTTTCGATAAGTAAGAGTGTCGAA 58.412 34.615 14.15 4.17 43.60 3.71
111 112 7.536622 TCTTTTCGATAAGTAAGAGTGTCGAAC 59.463 37.037 14.15 0.00 44.53 3.95
112 113 5.227238 TCGATAAGTAAGAGTGTCGAACC 57.773 43.478 0.00 0.00 35.48 3.62
113 114 4.095483 TCGATAAGTAAGAGTGTCGAACCC 59.905 45.833 0.00 0.00 35.48 4.11
114 115 4.142534 CGATAAGTAAGAGTGTCGAACCCA 60.143 45.833 0.00 0.00 0.00 4.51
115 116 5.620654 CGATAAGTAAGAGTGTCGAACCCAA 60.621 44.000 0.00 0.00 0.00 4.12
116 117 3.382048 AGTAAGAGTGTCGAACCCAAC 57.618 47.619 0.00 0.00 0.00 3.77
117 118 2.056577 GTAAGAGTGTCGAACCCAACG 58.943 52.381 0.00 0.00 0.00 4.10
118 119 0.748450 AAGAGTGTCGAACCCAACGA 59.252 50.000 0.00 0.00 37.43 3.85
119 120 0.314302 AGAGTGTCGAACCCAACGAG 59.686 55.000 0.00 0.00 40.37 4.18
120 121 0.666577 GAGTGTCGAACCCAACGAGG 60.667 60.000 0.00 0.00 40.37 4.63
121 122 1.111116 AGTGTCGAACCCAACGAGGA 61.111 55.000 0.00 0.00 41.22 3.71
122 123 0.666577 GTGTCGAACCCAACGAGGAG 60.667 60.000 0.00 0.00 41.22 3.69
123 124 0.824595 TGTCGAACCCAACGAGGAGA 60.825 55.000 0.00 0.00 41.22 3.71
124 125 0.316204 GTCGAACCCAACGAGGAGAA 59.684 55.000 0.00 0.00 41.22 2.87
125 126 0.601558 TCGAACCCAACGAGGAGAAG 59.398 55.000 0.00 0.00 41.22 2.85
126 127 0.601558 CGAACCCAACGAGGAGAAGA 59.398 55.000 0.00 0.00 41.22 2.87
127 128 1.000506 CGAACCCAACGAGGAGAAGAA 59.999 52.381 0.00 0.00 41.22 2.52
128 129 2.689646 GAACCCAACGAGGAGAAGAAG 58.310 52.381 0.00 0.00 41.22 2.85
129 130 0.977395 ACCCAACGAGGAGAAGAAGG 59.023 55.000 0.00 0.00 41.22 3.46
130 131 1.267121 CCCAACGAGGAGAAGAAGGA 58.733 55.000 0.00 0.00 41.22 3.36
131 132 1.623811 CCCAACGAGGAGAAGAAGGAA 59.376 52.381 0.00 0.00 41.22 3.36
132 133 2.038557 CCCAACGAGGAGAAGAAGGAAA 59.961 50.000 0.00 0.00 41.22 3.13
133 134 3.307762 CCCAACGAGGAGAAGAAGGAAAT 60.308 47.826 0.00 0.00 41.22 2.17
134 135 3.686726 CCAACGAGGAGAAGAAGGAAATG 59.313 47.826 0.00 0.00 41.22 2.32
135 136 4.563580 CCAACGAGGAGAAGAAGGAAATGA 60.564 45.833 0.00 0.00 41.22 2.57
136 137 4.195225 ACGAGGAGAAGAAGGAAATGAC 57.805 45.455 0.00 0.00 0.00 3.06
137 138 3.578716 ACGAGGAGAAGAAGGAAATGACA 59.421 43.478 0.00 0.00 0.00 3.58
138 139 4.040461 ACGAGGAGAAGAAGGAAATGACAA 59.960 41.667 0.00 0.00 0.00 3.18
139 140 4.629200 CGAGGAGAAGAAGGAAATGACAAG 59.371 45.833 0.00 0.00 0.00 3.16
140 141 5.555966 GAGGAGAAGAAGGAAATGACAAGT 58.444 41.667 0.00 0.00 0.00 3.16
141 142 5.312079 AGGAGAAGAAGGAAATGACAAGTG 58.688 41.667 0.00 0.00 0.00 3.16
142 143 4.457257 GGAGAAGAAGGAAATGACAAGTGG 59.543 45.833 0.00 0.00 0.00 4.00
143 144 5.053978 AGAAGAAGGAAATGACAAGTGGT 57.946 39.130 0.00 0.00 0.00 4.16
144 145 5.449553 AGAAGAAGGAAATGACAAGTGGTT 58.550 37.500 0.00 0.00 0.00 3.67
145 146 5.893824 AGAAGAAGGAAATGACAAGTGGTTT 59.106 36.000 0.00 0.00 0.00 3.27
146 147 6.381133 AGAAGAAGGAAATGACAAGTGGTTTT 59.619 34.615 0.00 0.00 0.00 2.43
147 148 6.149129 AGAAGGAAATGACAAGTGGTTTTC 57.851 37.500 0.00 0.00 0.00 2.29
148 149 5.656416 AGAAGGAAATGACAAGTGGTTTTCA 59.344 36.000 0.00 0.00 0.00 2.69
149 150 5.930837 AGGAAATGACAAGTGGTTTTCAA 57.069 34.783 0.00 0.00 0.00 2.69
150 151 5.660460 AGGAAATGACAAGTGGTTTTCAAC 58.340 37.500 0.00 0.00 0.00 3.18
151 152 5.186797 AGGAAATGACAAGTGGTTTTCAACA 59.813 36.000 0.00 0.00 0.00 3.33
152 153 5.872070 GGAAATGACAAGTGGTTTTCAACAA 59.128 36.000 0.00 0.00 0.00 2.83
153 154 6.035975 GGAAATGACAAGTGGTTTTCAACAAG 59.964 38.462 0.00 0.00 0.00 3.16
154 155 4.448537 TGACAAGTGGTTTTCAACAAGG 57.551 40.909 0.00 0.00 0.00 3.61
155 156 3.829601 TGACAAGTGGTTTTCAACAAGGT 59.170 39.130 0.00 0.00 0.00 3.50
156 157 5.010933 TGACAAGTGGTTTTCAACAAGGTA 58.989 37.500 0.00 0.00 0.00 3.08
157 158 5.477291 TGACAAGTGGTTTTCAACAAGGTAA 59.523 36.000 0.00 0.00 0.00 2.85
158 159 6.153680 TGACAAGTGGTTTTCAACAAGGTAAT 59.846 34.615 0.00 0.00 0.00 1.89
159 160 7.339721 TGACAAGTGGTTTTCAACAAGGTAATA 59.660 33.333 0.00 0.00 0.00 0.98
160 161 8.245195 ACAAGTGGTTTTCAACAAGGTAATAT 57.755 30.769 0.00 0.00 0.00 1.28
161 162 8.357402 ACAAGTGGTTTTCAACAAGGTAATATC 58.643 33.333 0.00 0.00 0.00 1.63
162 163 8.576442 CAAGTGGTTTTCAACAAGGTAATATCT 58.424 33.333 0.00 0.00 0.00 1.98
163 164 8.110860 AGTGGTTTTCAACAAGGTAATATCTG 57.889 34.615 0.00 0.00 0.00 2.90
164 165 6.806739 GTGGTTTTCAACAAGGTAATATCTGC 59.193 38.462 0.00 0.00 0.00 4.26
165 166 6.491745 TGGTTTTCAACAAGGTAATATCTGCA 59.508 34.615 0.00 0.00 0.00 4.41
166 167 7.014711 TGGTTTTCAACAAGGTAATATCTGCAA 59.985 33.333 0.00 0.00 0.00 4.08
167 168 7.542130 GGTTTTCAACAAGGTAATATCTGCAAG 59.458 37.037 0.00 0.00 0.00 4.01
168 169 7.759489 TTTCAACAAGGTAATATCTGCAAGT 57.241 32.000 0.00 0.00 33.76 3.16
169 170 7.759489 TTCAACAAGGTAATATCTGCAAGTT 57.241 32.000 0.00 0.00 33.76 2.66
170 171 7.377766 TCAACAAGGTAATATCTGCAAGTTC 57.622 36.000 0.00 0.00 33.76 3.01
171 172 7.168219 TCAACAAGGTAATATCTGCAAGTTCT 58.832 34.615 0.00 0.00 33.76 3.01
172 173 6.992063 ACAAGGTAATATCTGCAAGTTCTG 57.008 37.500 0.00 0.00 33.76 3.02
173 174 6.711277 ACAAGGTAATATCTGCAAGTTCTGA 58.289 36.000 0.00 0.00 33.76 3.27
174 175 7.168219 ACAAGGTAATATCTGCAAGTTCTGAA 58.832 34.615 0.00 0.00 33.76 3.02
175 176 7.831193 ACAAGGTAATATCTGCAAGTTCTGAAT 59.169 33.333 0.00 0.00 33.76 2.57
176 177 8.680903 CAAGGTAATATCTGCAAGTTCTGAATT 58.319 33.333 0.00 0.00 33.76 2.17
177 178 8.814038 AGGTAATATCTGCAAGTTCTGAATTT 57.186 30.769 0.00 0.00 33.76 1.82
178 179 8.680903 AGGTAATATCTGCAAGTTCTGAATTTG 58.319 33.333 18.06 18.06 33.76 2.32
179 180 8.462016 GGTAATATCTGCAAGTTCTGAATTTGT 58.538 33.333 21.63 8.83 33.76 2.83
183 184 6.942532 TCTGCAAGTTCTGAATTTGTAAGT 57.057 33.333 21.63 0.00 33.76 2.24
184 185 8.621532 ATCTGCAAGTTCTGAATTTGTAAGTA 57.378 30.769 21.63 10.01 33.76 2.24
185 186 8.087982 TCTGCAAGTTCTGAATTTGTAAGTAG 57.912 34.615 21.63 14.06 33.76 2.57
186 187 7.715249 TCTGCAAGTTCTGAATTTGTAAGTAGT 59.285 33.333 21.63 0.00 33.76 2.73
187 188 8.896320 TGCAAGTTCTGAATTTGTAAGTAGTA 57.104 30.769 21.63 0.00 31.49 1.82
188 189 8.988934 TGCAAGTTCTGAATTTGTAAGTAGTAG 58.011 33.333 21.63 0.00 31.49 2.57
189 190 9.204570 GCAAGTTCTGAATTTGTAAGTAGTAGA 57.795 33.333 21.63 0.00 31.49 2.59
203 204 9.676861 TGTAAGTAGTAGAGTAGTTTGATAGCA 57.323 33.333 0.00 0.00 0.00 3.49
206 207 9.463902 AAGTAGTAGAGTAGTTTGATAGCAAGA 57.536 33.333 0.00 0.00 35.04 3.02
207 208 9.635404 AGTAGTAGAGTAGTTTGATAGCAAGAT 57.365 33.333 0.00 0.00 35.04 2.40
218 219 9.988350 AGTTTGATAGCAAGATAATTTGTAACG 57.012 29.630 0.00 0.00 35.04 3.18
219 220 9.982291 GTTTGATAGCAAGATAATTTGTAACGA 57.018 29.630 0.00 0.00 35.04 3.85
221 222 7.851508 TGATAGCAAGATAATTTGTAACGAGC 58.148 34.615 0.00 0.00 0.00 5.03
222 223 7.494298 TGATAGCAAGATAATTTGTAACGAGCA 59.506 33.333 0.00 0.00 0.00 4.26
223 224 6.494893 AGCAAGATAATTTGTAACGAGCAA 57.505 33.333 0.00 0.00 0.00 3.91
224 225 6.546395 AGCAAGATAATTTGTAACGAGCAAG 58.454 36.000 0.00 0.00 0.00 4.01
225 226 6.149474 AGCAAGATAATTTGTAACGAGCAAGT 59.851 34.615 0.00 0.00 0.00 3.16
226 227 7.333423 AGCAAGATAATTTGTAACGAGCAAGTA 59.667 33.333 0.00 0.00 0.00 2.24
227 228 7.960738 GCAAGATAATTTGTAACGAGCAAGTAA 59.039 33.333 0.00 0.00 0.00 2.24
228 229 9.262472 CAAGATAATTTGTAACGAGCAAGTAAC 57.738 33.333 0.00 0.00 0.00 2.50
229 230 7.672738 AGATAATTTGTAACGAGCAAGTAACG 58.327 34.615 0.00 0.00 0.00 3.18
230 231 5.910637 AATTTGTAACGAGCAAGTAACGA 57.089 34.783 0.00 0.00 0.00 3.85
231 232 6.476243 AATTTGTAACGAGCAAGTAACGAT 57.524 33.333 0.00 0.00 0.00 3.73
232 233 7.585286 AATTTGTAACGAGCAAGTAACGATA 57.415 32.000 0.00 0.00 0.00 2.92
233 234 6.621737 TTTGTAACGAGCAAGTAACGATAG 57.378 37.500 0.00 0.00 46.19 2.08
251 252 5.786392 CGATAGTAGTAACAAAAGTGCAGC 58.214 41.667 0.00 0.00 0.00 5.25
252 253 5.347635 CGATAGTAGTAACAAAAGTGCAGCA 59.652 40.000 0.00 0.00 0.00 4.41
253 254 6.128661 CGATAGTAGTAACAAAAGTGCAGCAA 60.129 38.462 0.00 0.00 0.00 3.91
254 255 5.424121 AGTAGTAACAAAAGTGCAGCAAG 57.576 39.130 0.00 0.00 0.00 4.01
255 256 5.123227 AGTAGTAACAAAAGTGCAGCAAGA 58.877 37.500 0.00 0.00 0.00 3.02
256 257 5.765182 AGTAGTAACAAAAGTGCAGCAAGAT 59.235 36.000 0.00 0.00 0.00 2.40
257 258 6.934645 AGTAGTAACAAAAGTGCAGCAAGATA 59.065 34.615 0.00 0.00 0.00 1.98
258 259 6.246420 AGTAACAAAAGTGCAGCAAGATAG 57.754 37.500 0.00 0.00 0.00 2.08
259 260 3.565905 ACAAAAGTGCAGCAAGATAGC 57.434 42.857 0.00 0.00 0.00 2.97
260 261 2.229784 ACAAAAGTGCAGCAAGATAGCC 59.770 45.455 0.00 0.00 34.23 3.93
261 262 1.467920 AAAGTGCAGCAAGATAGCCC 58.532 50.000 0.00 0.00 34.23 5.19
262 263 0.329261 AAGTGCAGCAAGATAGCCCA 59.671 50.000 0.00 0.00 34.23 5.36
263 264 0.329261 AGTGCAGCAAGATAGCCCAA 59.671 50.000 0.00 0.00 34.23 4.12
264 265 1.064166 AGTGCAGCAAGATAGCCCAAT 60.064 47.619 0.00 0.00 34.23 3.16
265 266 1.336125 GTGCAGCAAGATAGCCCAATC 59.664 52.381 0.00 0.00 34.23 2.67
266 267 0.957362 GCAGCAAGATAGCCCAATCC 59.043 55.000 0.00 0.00 34.23 3.01
267 268 1.478288 GCAGCAAGATAGCCCAATCCT 60.478 52.381 0.00 0.00 34.23 3.24
268 269 2.941480 CAGCAAGATAGCCCAATCCTT 58.059 47.619 0.00 0.00 34.23 3.36
269 270 3.294214 CAGCAAGATAGCCCAATCCTTT 58.706 45.455 0.00 0.00 34.23 3.11
270 271 3.703052 CAGCAAGATAGCCCAATCCTTTT 59.297 43.478 0.00 0.00 34.23 2.27
271 272 3.703052 AGCAAGATAGCCCAATCCTTTTG 59.297 43.478 0.00 0.00 34.23 2.44
272 273 3.701040 GCAAGATAGCCCAATCCTTTTGA 59.299 43.478 0.00 0.00 0.00 2.69
273 274 4.202090 GCAAGATAGCCCAATCCTTTTGAG 60.202 45.833 0.00 0.00 0.00 3.02
274 275 4.176120 AGATAGCCCAATCCTTTTGAGG 57.824 45.455 0.00 0.00 0.00 3.86
275 276 2.143876 TAGCCCAATCCTTTTGAGGC 57.856 50.000 8.76 8.76 36.59 4.70
276 277 0.114954 AGCCCAATCCTTTTGAGGCA 59.885 50.000 15.42 0.00 37.85 4.75
277 278 0.975887 GCCCAATCCTTTTGAGGCAA 59.024 50.000 10.83 0.00 36.45 4.52
278 279 1.347378 GCCCAATCCTTTTGAGGCAAA 59.653 47.619 10.83 0.00 36.45 3.68
279 280 2.613725 GCCCAATCCTTTTGAGGCAAAG 60.614 50.000 10.83 0.00 34.72 2.77
280 281 2.027837 CCCAATCCTTTTGAGGCAAAGG 60.028 50.000 8.20 8.20 34.72 3.11
281 282 2.899256 CCAATCCTTTTGAGGCAAAGGA 59.101 45.455 16.98 16.98 36.20 3.36
282 283 3.306294 CCAATCCTTTTGAGGCAAAGGAC 60.306 47.826 16.99 0.00 35.36 3.85
283 284 2.746279 TCCTTTTGAGGCAAAGGACA 57.254 45.000 12.17 0.00 34.72 4.02
284 285 2.586425 TCCTTTTGAGGCAAAGGACAG 58.414 47.619 12.17 0.00 34.72 3.51
285 286 1.615392 CCTTTTGAGGCAAAGGACAGG 59.385 52.381 8.73 0.00 34.72 4.00
286 287 1.000171 CTTTTGAGGCAAAGGACAGGC 60.000 52.381 0.00 0.00 34.72 4.85
290 291 3.869481 GGCAAAGGACAGGCCAAA 58.131 55.556 5.01 0.00 46.92 3.28
291 292 2.132300 GGCAAAGGACAGGCCAAAA 58.868 52.632 5.01 0.00 46.92 2.44
292 293 0.249868 GGCAAAGGACAGGCCAAAAC 60.250 55.000 5.01 0.00 46.92 2.43
293 294 0.597377 GCAAAGGACAGGCCAAAACG 60.597 55.000 5.01 0.00 40.02 3.60
294 295 0.031994 CAAAGGACAGGCCAAAACGG 59.968 55.000 5.01 0.00 40.02 4.44
295 296 0.396556 AAAGGACAGGCCAAAACGGT 60.397 50.000 5.01 0.00 40.02 4.83
296 297 0.822121 AAGGACAGGCCAAAACGGTC 60.822 55.000 5.01 2.25 41.10 4.79
304 305 2.706890 GGCCAAAACGGTCTCTTATGA 58.293 47.619 0.00 0.00 35.97 2.15
305 306 3.279434 GGCCAAAACGGTCTCTTATGAT 58.721 45.455 0.00 0.00 35.97 2.45
306 307 4.448210 GGCCAAAACGGTCTCTTATGATA 58.552 43.478 0.00 0.00 35.97 2.15
307 308 4.879545 GGCCAAAACGGTCTCTTATGATAA 59.120 41.667 0.00 0.00 35.97 1.75
308 309 5.007724 GGCCAAAACGGTCTCTTATGATAAG 59.992 44.000 5.86 5.86 35.97 1.73
309 310 5.504173 GCCAAAACGGTCTCTTATGATAAGC 60.504 44.000 7.33 0.00 36.97 3.09
310 311 5.584649 CCAAAACGGTCTCTTATGATAAGCA 59.415 40.000 7.33 0.00 0.00 3.91
311 312 6.093495 CCAAAACGGTCTCTTATGATAAGCAA 59.907 38.462 7.33 0.00 0.00 3.91
312 313 7.361713 CCAAAACGGTCTCTTATGATAAGCAAA 60.362 37.037 7.33 0.00 0.00 3.68
313 314 6.910536 AACGGTCTCTTATGATAAGCAAAG 57.089 37.500 7.33 0.79 0.00 2.77
314 315 5.978814 ACGGTCTCTTATGATAAGCAAAGT 58.021 37.500 7.33 1.85 0.00 2.66
315 316 5.812642 ACGGTCTCTTATGATAAGCAAAGTG 59.187 40.000 7.33 0.00 0.00 3.16
316 317 5.812642 CGGTCTCTTATGATAAGCAAAGTGT 59.187 40.000 7.33 0.00 0.00 3.55
317 318 6.313905 CGGTCTCTTATGATAAGCAAAGTGTT 59.686 38.462 7.33 0.00 0.00 3.32
318 319 7.464710 CGGTCTCTTATGATAAGCAAAGTGTTC 60.465 40.741 7.33 0.00 0.00 3.18
319 320 7.550906 GGTCTCTTATGATAAGCAAAGTGTTCT 59.449 37.037 7.33 0.00 0.00 3.01
320 321 8.940952 GTCTCTTATGATAAGCAAAGTGTTCTT 58.059 33.333 7.33 0.00 35.14 2.52
321 322 8.939929 TCTCTTATGATAAGCAAAGTGTTCTTG 58.060 33.333 7.33 0.00 33.79 3.02
322 323 8.846943 TCTTATGATAAGCAAAGTGTTCTTGA 57.153 30.769 7.33 0.00 33.79 3.02
323 324 8.939929 TCTTATGATAAGCAAAGTGTTCTTGAG 58.060 33.333 7.33 0.00 33.79 3.02
324 325 5.947228 TGATAAGCAAAGTGTTCTTGAGG 57.053 39.130 0.00 0.00 33.79 3.86
325 326 4.761739 TGATAAGCAAAGTGTTCTTGAGGG 59.238 41.667 0.00 0.00 33.79 4.30
326 327 2.736670 AGCAAAGTGTTCTTGAGGGT 57.263 45.000 0.00 0.00 33.79 4.34
327 328 3.857157 AGCAAAGTGTTCTTGAGGGTA 57.143 42.857 0.00 0.00 33.79 3.69
328 329 3.477530 AGCAAAGTGTTCTTGAGGGTAC 58.522 45.455 0.00 0.00 33.79 3.34
329 330 3.118038 AGCAAAGTGTTCTTGAGGGTACA 60.118 43.478 0.00 0.00 33.79 2.90
330 331 3.003378 GCAAAGTGTTCTTGAGGGTACAC 59.997 47.826 0.00 0.00 40.81 2.90
331 332 2.814280 AGTGTTCTTGAGGGTACACG 57.186 50.000 0.00 0.00 44.16 4.49
332 333 1.343465 AGTGTTCTTGAGGGTACACGG 59.657 52.381 0.00 0.00 44.16 4.94
333 334 0.682852 TGTTCTTGAGGGTACACGGG 59.317 55.000 0.00 0.00 0.00 5.28
334 335 0.971386 GTTCTTGAGGGTACACGGGA 59.029 55.000 0.00 0.00 0.00 5.14
335 336 1.345415 GTTCTTGAGGGTACACGGGAA 59.655 52.381 0.00 0.00 0.00 3.97
336 337 1.946984 TCTTGAGGGTACACGGGAAT 58.053 50.000 0.00 0.00 0.00 3.01
337 338 2.262637 TCTTGAGGGTACACGGGAATT 58.737 47.619 0.00 0.00 0.00 2.17
338 339 2.640826 TCTTGAGGGTACACGGGAATTT 59.359 45.455 0.00 0.00 0.00 1.82
339 340 2.773993 TGAGGGTACACGGGAATTTC 57.226 50.000 0.00 0.00 0.00 2.17
340 341 1.979308 TGAGGGTACACGGGAATTTCA 59.021 47.619 0.00 0.00 0.00 2.69
341 342 2.574369 TGAGGGTACACGGGAATTTCAT 59.426 45.455 0.00 0.00 0.00 2.57
342 343 3.203716 GAGGGTACACGGGAATTTCATC 58.796 50.000 0.00 0.00 0.00 2.92
343 344 2.844348 AGGGTACACGGGAATTTCATCT 59.156 45.455 0.00 0.00 0.00 2.90
344 345 4.035112 AGGGTACACGGGAATTTCATCTA 58.965 43.478 0.00 0.00 0.00 1.98
345 346 4.101119 AGGGTACACGGGAATTTCATCTAG 59.899 45.833 0.00 0.00 0.00 2.43
346 347 4.141779 GGGTACACGGGAATTTCATCTAGT 60.142 45.833 0.00 0.00 0.00 2.57
347 348 5.048507 GGTACACGGGAATTTCATCTAGTC 58.951 45.833 0.00 0.00 0.00 2.59
348 349 4.819105 ACACGGGAATTTCATCTAGTCA 57.181 40.909 0.00 0.00 0.00 3.41
349 350 4.504858 ACACGGGAATTTCATCTAGTCAC 58.495 43.478 0.00 0.00 0.00 3.67
350 351 4.223032 ACACGGGAATTTCATCTAGTCACT 59.777 41.667 0.00 0.00 0.00 3.41
351 352 5.178797 CACGGGAATTTCATCTAGTCACTT 58.821 41.667 0.00 0.00 0.00 3.16
352 353 5.643777 CACGGGAATTTCATCTAGTCACTTT 59.356 40.000 0.00 0.00 0.00 2.66
353 354 5.875359 ACGGGAATTTCATCTAGTCACTTTC 59.125 40.000 0.00 0.00 0.00 2.62
354 355 5.874810 CGGGAATTTCATCTAGTCACTTTCA 59.125 40.000 0.00 0.00 0.00 2.69
355 356 6.540189 CGGGAATTTCATCTAGTCACTTTCAT 59.460 38.462 0.00 0.00 0.00 2.57
356 357 7.254590 CGGGAATTTCATCTAGTCACTTTCATC 60.255 40.741 0.00 0.00 0.00 2.92
357 358 7.554118 GGGAATTTCATCTAGTCACTTTCATCA 59.446 37.037 0.00 0.00 0.00 3.07
358 359 9.118300 GGAATTTCATCTAGTCACTTTCATCAT 57.882 33.333 0.00 0.00 0.00 2.45
359 360 9.932699 GAATTTCATCTAGTCACTTTCATCATG 57.067 33.333 0.00 0.00 0.00 3.07
360 361 9.458727 AATTTCATCTAGTCACTTTCATCATGT 57.541 29.630 0.00 0.00 0.00 3.21
361 362 8.853077 TTTCATCTAGTCACTTTCATCATGTT 57.147 30.769 0.00 0.00 0.00 2.71
362 363 7.838771 TCATCTAGTCACTTTCATCATGTTG 57.161 36.000 0.00 0.00 0.00 3.33
363 364 6.820152 TCATCTAGTCACTTTCATCATGTTGG 59.180 38.462 3.98 0.00 0.00 3.77
364 365 6.114187 TCTAGTCACTTTCATCATGTTGGT 57.886 37.500 3.98 0.00 0.00 3.67
365 366 6.533730 TCTAGTCACTTTCATCATGTTGGTT 58.466 36.000 3.98 0.00 0.00 3.67
366 367 6.998074 TCTAGTCACTTTCATCATGTTGGTTT 59.002 34.615 3.98 0.00 0.00 3.27
367 368 8.154203 TCTAGTCACTTTCATCATGTTGGTTTA 58.846 33.333 3.98 0.00 0.00 2.01
368 369 7.581213 AGTCACTTTCATCATGTTGGTTTAA 57.419 32.000 3.98 0.00 0.00 1.52
369 370 8.181904 AGTCACTTTCATCATGTTGGTTTAAT 57.818 30.769 3.98 0.00 0.00 1.40
370 371 8.641541 AGTCACTTTCATCATGTTGGTTTAATT 58.358 29.630 3.98 0.00 0.00 1.40
371 372 8.915654 GTCACTTTCATCATGTTGGTTTAATTC 58.084 33.333 3.98 0.00 0.00 2.17
372 373 7.807433 TCACTTTCATCATGTTGGTTTAATTCG 59.193 33.333 3.98 0.00 0.00 3.34
373 374 7.594758 CACTTTCATCATGTTGGTTTAATTCGT 59.405 33.333 3.98 0.00 0.00 3.85
374 375 7.594758 ACTTTCATCATGTTGGTTTAATTCGTG 59.405 33.333 3.98 0.00 0.00 4.35
375 376 6.567687 TCATCATGTTGGTTTAATTCGTGT 57.432 33.333 3.98 0.00 0.00 4.49
376 377 6.976088 TCATCATGTTGGTTTAATTCGTGTT 58.024 32.000 3.98 0.00 0.00 3.32
377 378 7.081349 TCATCATGTTGGTTTAATTCGTGTTC 58.919 34.615 3.98 0.00 0.00 3.18
378 379 5.444983 TCATGTTGGTTTAATTCGTGTTCG 58.555 37.500 0.00 0.00 38.55 3.95
379 380 4.212213 TGTTGGTTTAATTCGTGTTCGG 57.788 40.909 0.00 0.00 37.69 4.30
380 381 3.626670 TGTTGGTTTAATTCGTGTTCGGT 59.373 39.130 0.00 0.00 37.69 4.69
381 382 4.813161 TGTTGGTTTAATTCGTGTTCGGTA 59.187 37.500 0.00 0.00 37.69 4.02
382 383 4.988708 TGGTTTAATTCGTGTTCGGTAC 57.011 40.909 0.00 0.00 37.69 3.34
383 384 4.630111 TGGTTTAATTCGTGTTCGGTACT 58.370 39.130 0.00 0.00 37.69 2.73
384 385 5.055812 TGGTTTAATTCGTGTTCGGTACTT 58.944 37.500 0.00 0.00 37.69 2.24
385 386 5.526846 TGGTTTAATTCGTGTTCGGTACTTT 59.473 36.000 0.00 0.00 37.69 2.66
386 387 5.847515 GGTTTAATTCGTGTTCGGTACTTTG 59.152 40.000 0.00 0.00 37.69 2.77
387 388 6.292811 GGTTTAATTCGTGTTCGGTACTTTGA 60.293 38.462 0.00 0.00 37.69 2.69
388 389 7.293018 GTTTAATTCGTGTTCGGTACTTTGAT 58.707 34.615 0.00 0.00 37.69 2.57
389 390 8.434661 GTTTAATTCGTGTTCGGTACTTTGATA 58.565 33.333 0.00 0.00 37.69 2.15
390 391 8.531622 TTAATTCGTGTTCGGTACTTTGATAA 57.468 30.769 0.00 0.00 37.69 1.75
391 392 7.605410 AATTCGTGTTCGGTACTTTGATAAT 57.395 32.000 0.00 0.00 37.69 1.28
392 393 7.605410 ATTCGTGTTCGGTACTTTGATAATT 57.395 32.000 0.00 0.00 37.69 1.40
393 394 7.424227 TTCGTGTTCGGTACTTTGATAATTT 57.576 32.000 0.00 0.00 37.69 1.82
394 395 6.823531 TCGTGTTCGGTACTTTGATAATTTG 58.176 36.000 0.00 0.00 37.69 2.32
395 396 6.645827 TCGTGTTCGGTACTTTGATAATTTGA 59.354 34.615 0.00 0.00 37.69 2.69
396 397 7.332430 TCGTGTTCGGTACTTTGATAATTTGAT 59.668 33.333 0.00 0.00 37.69 2.57
397 398 8.597227 CGTGTTCGGTACTTTGATAATTTGATA 58.403 33.333 0.00 0.00 0.00 2.15
402 403 9.051679 TCGGTACTTTGATAATTTGATATGTGG 57.948 33.333 0.00 0.00 0.00 4.17
403 404 8.289618 CGGTACTTTGATAATTTGATATGTGGG 58.710 37.037 0.00 0.00 0.00 4.61
404 405 9.131791 GGTACTTTGATAATTTGATATGTGGGT 57.868 33.333 0.00 0.00 0.00 4.51
405 406 9.950680 GTACTTTGATAATTTGATATGTGGGTG 57.049 33.333 0.00 0.00 0.00 4.61
406 407 8.010733 ACTTTGATAATTTGATATGTGGGTGG 57.989 34.615 0.00 0.00 0.00 4.61
407 408 7.838696 ACTTTGATAATTTGATATGTGGGTGGA 59.161 33.333 0.00 0.00 0.00 4.02
408 409 7.581213 TTGATAATTTGATATGTGGGTGGAC 57.419 36.000 0.00 0.00 0.00 4.02
409 410 6.068010 TGATAATTTGATATGTGGGTGGACC 58.932 40.000 0.00 0.00 40.81 4.46
417 418 4.322681 TGGGTGGACCAGTGCTTA 57.677 55.556 0.00 0.00 46.80 3.09
418 419 2.066340 TGGGTGGACCAGTGCTTAG 58.934 57.895 0.00 0.00 46.80 2.18
419 420 1.299976 GGGTGGACCAGTGCTTAGG 59.700 63.158 0.00 0.00 39.85 2.69
420 421 1.489560 GGGTGGACCAGTGCTTAGGT 61.490 60.000 0.00 0.00 41.83 3.08
421 422 0.321653 GGTGGACCAGTGCTTAGGTG 60.322 60.000 0.00 0.00 38.50 4.00
422 423 0.685097 GTGGACCAGTGCTTAGGTGA 59.315 55.000 0.00 0.00 38.50 4.02
423 424 1.279271 GTGGACCAGTGCTTAGGTGAT 59.721 52.381 0.00 0.00 38.50 3.06
424 425 2.500098 GTGGACCAGTGCTTAGGTGATA 59.500 50.000 0.00 0.00 38.50 2.15
425 426 3.134804 GTGGACCAGTGCTTAGGTGATAT 59.865 47.826 0.00 0.00 38.50 1.63
426 427 3.780294 TGGACCAGTGCTTAGGTGATATT 59.220 43.478 0.00 0.00 38.50 1.28
427 428 4.141711 TGGACCAGTGCTTAGGTGATATTC 60.142 45.833 0.00 0.00 38.50 1.75
428 429 4.101741 GGACCAGTGCTTAGGTGATATTCT 59.898 45.833 0.00 0.00 38.50 2.40
429 430 5.396884 GGACCAGTGCTTAGGTGATATTCTT 60.397 44.000 0.00 0.00 38.50 2.52
430 431 6.183360 GGACCAGTGCTTAGGTGATATTCTTA 60.183 42.308 0.00 0.00 38.50 2.10
431 432 6.583562 ACCAGTGCTTAGGTGATATTCTTAC 58.416 40.000 0.00 0.00 36.60 2.34
432 433 6.384305 ACCAGTGCTTAGGTGATATTCTTACT 59.616 38.462 0.00 0.00 36.60 2.24
433 434 7.092846 ACCAGTGCTTAGGTGATATTCTTACTT 60.093 37.037 0.00 0.00 36.60 2.24
434 435 7.225538 CCAGTGCTTAGGTGATATTCTTACTTG 59.774 40.741 0.00 0.00 0.00 3.16
435 436 7.981789 CAGTGCTTAGGTGATATTCTTACTTGA 59.018 37.037 0.00 0.00 0.00 3.02
436 437 8.540388 AGTGCTTAGGTGATATTCTTACTTGAA 58.460 33.333 0.00 0.00 0.00 2.69
437 438 8.604890 GTGCTTAGGTGATATTCTTACTTGAAC 58.395 37.037 0.00 0.00 0.00 3.18
438 439 8.318412 TGCTTAGGTGATATTCTTACTTGAACA 58.682 33.333 0.00 0.00 0.00 3.18
439 440 9.162764 GCTTAGGTGATATTCTTACTTGAACAA 57.837 33.333 0.00 0.00 0.00 2.83
442 443 8.336801 AGGTGATATTCTTACTTGAACAAACC 57.663 34.615 0.00 0.00 0.00 3.27
443 444 8.164070 AGGTGATATTCTTACTTGAACAAACCT 58.836 33.333 0.00 0.00 30.65 3.50
444 445 8.451748 GGTGATATTCTTACTTGAACAAACCTC 58.548 37.037 0.00 0.00 0.00 3.85
445 446 8.451748 GTGATATTCTTACTTGAACAAACCTCC 58.548 37.037 0.00 0.00 0.00 4.30
446 447 8.383175 TGATATTCTTACTTGAACAAACCTCCT 58.617 33.333 0.00 0.00 0.00 3.69
447 448 9.886132 GATATTCTTACTTGAACAAACCTCCTA 57.114 33.333 0.00 0.00 0.00 2.94
448 449 7.981102 ATTCTTACTTGAACAAACCTCCTAC 57.019 36.000 0.00 0.00 0.00 3.18
449 450 6.742559 TCTTACTTGAACAAACCTCCTACT 57.257 37.500 0.00 0.00 0.00 2.57
450 451 7.133133 TCTTACTTGAACAAACCTCCTACTT 57.867 36.000 0.00 0.00 0.00 2.24
451 452 8.253867 TCTTACTTGAACAAACCTCCTACTTA 57.746 34.615 0.00 0.00 0.00 2.24
452 453 8.877195 TCTTACTTGAACAAACCTCCTACTTAT 58.123 33.333 0.00 0.00 0.00 1.73
453 454 8.842358 TTACTTGAACAAACCTCCTACTTATG 57.158 34.615 0.00 0.00 0.00 1.90
454 455 7.074653 ACTTGAACAAACCTCCTACTTATGA 57.925 36.000 0.00 0.00 0.00 2.15
455 456 7.690256 ACTTGAACAAACCTCCTACTTATGAT 58.310 34.615 0.00 0.00 0.00 2.45
456 457 8.164070 ACTTGAACAAACCTCCTACTTATGATT 58.836 33.333 0.00 0.00 0.00 2.57
457 458 9.667107 CTTGAACAAACCTCCTACTTATGATTA 57.333 33.333 0.00 0.00 0.00 1.75
459 460 9.444600 TGAACAAACCTCCTACTTATGATTAAC 57.555 33.333 0.00 0.00 0.00 2.01
460 461 8.803397 AACAAACCTCCTACTTATGATTAACC 57.197 34.615 0.00 0.00 0.00 2.85
461 462 7.344134 ACAAACCTCCTACTTATGATTAACCC 58.656 38.462 0.00 0.00 0.00 4.11
462 463 7.184022 ACAAACCTCCTACTTATGATTAACCCT 59.816 37.037 0.00 0.00 0.00 4.34
463 464 6.997942 ACCTCCTACTTATGATTAACCCTC 57.002 41.667 0.00 0.00 0.00 4.30
464 465 5.845065 ACCTCCTACTTATGATTAACCCTCC 59.155 44.000 0.00 0.00 0.00 4.30
465 466 5.248705 CCTCCTACTTATGATTAACCCTCCC 59.751 48.000 0.00 0.00 0.00 4.30
466 467 4.836736 TCCTACTTATGATTAACCCTCCCG 59.163 45.833 0.00 0.00 0.00 5.14
467 468 3.487120 ACTTATGATTAACCCTCCCGC 57.513 47.619 0.00 0.00 0.00 6.13
468 469 2.775384 ACTTATGATTAACCCTCCCGCA 59.225 45.455 0.00 0.00 0.00 5.69
469 470 3.201266 ACTTATGATTAACCCTCCCGCAA 59.799 43.478 0.00 0.00 0.00 4.85
523 524 6.716284 TCCACCAGAAACATATGTTGATGTA 58.284 36.000 21.46 6.39 39.16 2.29
577 578 4.815308 CACAATGAGGCAAACAATGGAAAA 59.185 37.500 0.00 0.00 0.00 2.29
719 723 1.810151 CAGTACCCCATTGTTGGTTCG 59.190 52.381 0.97 0.00 41.91 3.95
738 742 5.230942 GTTCGATAATGTAGCTATGGCAGT 58.769 41.667 3.10 0.00 41.70 4.40
769 773 3.949586 TCTTGGGACCATGCATATGAA 57.050 42.857 6.97 0.00 36.36 2.57
843 847 3.312736 AAATGGGTGGACTGTTGAAGT 57.687 42.857 0.00 0.00 43.85 3.01
883 888 9.357652 ACAAATACATTCAATCAGAAATTTCCG 57.642 29.630 14.61 4.74 40.22 4.30
1071 1077 9.468532 AGCTCTTTTCTTGATAAATTGTTTGTC 57.531 29.630 0.00 0.00 0.00 3.18
1132 1138 2.094078 CCCAACCATACAATGTTGCTGG 60.094 50.000 11.35 11.35 39.13 4.85
1165 1171 7.646884 AGGATCATCCAAGGATAAAGAAGTTT 58.353 34.615 6.42 0.00 39.61 2.66
1343 1350 0.464916 GTGTGTTTCCACCGACCCTT 60.465 55.000 0.00 0.00 41.09 3.95
1378 1385 8.795842 TCCTTTTCTTTCTAAACAGTTGTACA 57.204 30.769 0.00 0.00 0.00 2.90
1395 1402 7.012894 CAGTTGTACAATGAAGGACCAAGTTAA 59.987 37.037 12.26 0.00 0.00 2.01
1536 1575 1.423584 TGCTCCAGGAGACTTGAACA 58.576 50.000 21.89 3.52 40.21 3.18
1596 1635 5.558818 CCATTTCTCCTATGGATTCCTCTG 58.441 45.833 3.95 0.00 44.36 3.35
1638 1677 7.862274 ATCTCCTCTACCAATGTTGATGATA 57.138 36.000 0.00 0.00 0.00 2.15
1779 1819 4.556233 CCAGATCGTTGTTGTACTTGAGA 58.444 43.478 0.00 0.00 0.00 3.27
1790 1830 6.220930 TGTTGTACTTGAGAACTACATGGAC 58.779 40.000 0.00 0.00 32.50 4.02
1831 1873 4.214437 GCAAAACTGATTGACGAGTTGAG 58.786 43.478 0.00 0.00 32.66 3.02
1832 1874 4.024893 GCAAAACTGATTGACGAGTTGAGA 60.025 41.667 0.00 0.00 32.66 3.27
1908 1950 7.637511 AGAACCAATGGAAGATCTATCAGTTT 58.362 34.615 6.16 0.00 0.00 2.66
1932 1981 1.975660 AAAAGCAAAGGCACTACGGA 58.024 45.000 0.00 0.00 44.61 4.69
1961 2010 4.579454 ATGCCCAATGAATCGAGAAATG 57.421 40.909 0.00 0.00 0.00 2.32
2012 2061 4.281657 GGCTTTATTGGTTGAAGGAGGAT 58.718 43.478 0.00 0.00 0.00 3.24
2031 2080 9.474313 AGGAGGATATTTCTGAGATGTAGATAC 57.526 37.037 0.00 0.00 0.00 2.24
2075 2130 5.359576 TCACCTTCTTGTTTTGCACTACATT 59.640 36.000 1.26 0.00 0.00 2.71
2077 2132 5.221244 ACCTTCTTGTTTTGCACTACATTCC 60.221 40.000 1.26 0.00 0.00 3.01
2420 2480 1.143684 ACTGGACAGCCTTGTGATTGT 59.856 47.619 0.00 0.00 37.76 2.71
2553 2619 4.464244 ACTCTGAACTGATGCTAGCTAACA 59.536 41.667 17.23 11.84 0.00 2.41
2559 2625 8.146479 TGAACTGATGCTAGCTAACATATTTG 57.854 34.615 17.23 3.82 0.00 2.32
2566 2632 8.931385 ATGCTAGCTAACATATTTGTTTTTGG 57.069 30.769 17.23 0.00 43.57 3.28
2599 2686 6.899393 AACATCAAGTTGTGGTACATGATT 57.101 33.333 0.00 0.00 39.49 2.57
2630 2717 3.142174 GAGTGGAGAAAAGACCCAAGTG 58.858 50.000 0.00 0.00 0.00 3.16
2651 2739 3.648982 CGTGCTTGTGCCTTGCGA 61.649 61.111 0.00 0.00 38.71 5.10
2728 2816 6.509418 ACTTTTTCTAGTGCACAAACTTGA 57.491 33.333 21.04 1.49 31.42 3.02
2729 2817 6.322491 ACTTTTTCTAGTGCACAAACTTGAC 58.678 36.000 21.04 0.00 32.75 3.18
2730 2818 5.888691 TTTTCTAGTGCACAAACTTGACA 57.111 34.783 21.04 0.00 32.75 3.58
2838 2930 7.488187 TGCAGAATGATATCTTAAGCTTGAC 57.512 36.000 9.86 0.00 39.69 3.18
2917 3010 1.086696 CTTCGTTATGTGCCTGTGGG 58.913 55.000 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.253432 GGTGAAGCTTCTTTGGTAAGTGG 59.747 47.826 26.09 0.00 32.98 4.00
1 2 3.253432 GGGTGAAGCTTCTTTGGTAAGTG 59.747 47.826 26.09 0.00 32.98 3.16
2 3 3.487372 GGGTGAAGCTTCTTTGGTAAGT 58.513 45.455 26.09 0.00 32.98 2.24
6 7 0.853530 AGGGGTGAAGCTTCTTTGGT 59.146 50.000 26.09 6.69 0.00 3.67
7 8 1.539157 GAGGGGTGAAGCTTCTTTGG 58.461 55.000 26.09 0.00 0.00 3.28
8 9 1.160137 CGAGGGGTGAAGCTTCTTTG 58.840 55.000 26.09 7.87 0.00 2.77
9 10 1.056660 TCGAGGGGTGAAGCTTCTTT 58.943 50.000 26.09 8.03 0.00 2.52
10 11 0.321996 GTCGAGGGGTGAAGCTTCTT 59.678 55.000 26.09 7.70 0.00 2.52
11 12 0.832135 TGTCGAGGGGTGAAGCTTCT 60.832 55.000 26.09 6.43 0.00 2.85
12 13 0.034896 TTGTCGAGGGGTGAAGCTTC 59.965 55.000 19.89 19.89 0.00 3.86
13 14 0.250338 GTTGTCGAGGGGTGAAGCTT 60.250 55.000 0.00 0.00 0.00 3.74
14 15 1.371558 GTTGTCGAGGGGTGAAGCT 59.628 57.895 0.00 0.00 0.00 3.74
15 16 2.027625 CGTTGTCGAGGGGTGAAGC 61.028 63.158 0.00 0.00 39.71 3.86
16 17 1.374252 CCGTTGTCGAGGGGTGAAG 60.374 63.158 0.00 0.00 39.71 3.02
17 18 2.738480 CCGTTGTCGAGGGGTGAA 59.262 61.111 0.00 0.00 39.71 3.18
18 19 3.998672 GCCGTTGTCGAGGGGTGA 61.999 66.667 0.97 0.00 39.71 4.02
23 24 3.777925 CTTGCGCCGTTGTCGAGG 61.778 66.667 4.18 0.00 39.71 4.63
24 25 1.827315 TTTCTTGCGCCGTTGTCGAG 61.827 55.000 4.18 0.00 39.71 4.04
25 26 1.429927 TTTTCTTGCGCCGTTGTCGA 61.430 50.000 4.18 0.00 39.71 4.20
26 27 0.385473 ATTTTCTTGCGCCGTTGTCG 60.385 50.000 4.18 0.00 0.00 4.35
27 28 2.505866 CTATTTTCTTGCGCCGTTGTC 58.494 47.619 4.18 0.00 0.00 3.18
28 29 1.401018 GCTATTTTCTTGCGCCGTTGT 60.401 47.619 4.18 0.00 0.00 3.32
29 30 1.259316 GCTATTTTCTTGCGCCGTTG 58.741 50.000 4.18 0.00 0.00 4.10
30 31 0.170339 GGCTATTTTCTTGCGCCGTT 59.830 50.000 4.18 0.00 0.00 4.44
31 32 0.676782 AGGCTATTTTCTTGCGCCGT 60.677 50.000 4.18 0.00 45.16 5.68
32 33 0.451783 AAGGCTATTTTCTTGCGCCG 59.548 50.000 4.18 0.00 45.16 6.46
33 34 1.472480 TCAAGGCTATTTTCTTGCGCC 59.528 47.619 4.18 0.00 39.92 6.53
34 35 2.519963 GTCAAGGCTATTTTCTTGCGC 58.480 47.619 0.00 0.00 39.92 6.09
35 36 2.415168 TCGTCAAGGCTATTTTCTTGCG 59.585 45.455 0.00 0.00 39.92 4.85
36 37 3.426292 GGTCGTCAAGGCTATTTTCTTGC 60.426 47.826 0.00 0.00 39.92 4.01
37 38 3.127030 GGGTCGTCAAGGCTATTTTCTTG 59.873 47.826 0.00 0.00 41.06 3.02
38 39 3.244770 TGGGTCGTCAAGGCTATTTTCTT 60.245 43.478 0.00 0.00 0.00 2.52
39 40 2.304761 TGGGTCGTCAAGGCTATTTTCT 59.695 45.455 0.00 0.00 0.00 2.52
40 41 2.418976 GTGGGTCGTCAAGGCTATTTTC 59.581 50.000 0.00 0.00 0.00 2.29
41 42 2.224670 TGTGGGTCGTCAAGGCTATTTT 60.225 45.455 0.00 0.00 0.00 1.82
42 43 1.349688 TGTGGGTCGTCAAGGCTATTT 59.650 47.619 0.00 0.00 0.00 1.40
43 44 0.981183 TGTGGGTCGTCAAGGCTATT 59.019 50.000 0.00 0.00 0.00 1.73
44 45 0.981183 TTGTGGGTCGTCAAGGCTAT 59.019 50.000 0.00 0.00 0.00 2.97
45 46 0.320374 CTTGTGGGTCGTCAAGGCTA 59.680 55.000 0.00 0.00 37.83 3.93
46 47 1.071471 CTTGTGGGTCGTCAAGGCT 59.929 57.895 0.00 0.00 37.83 4.58
47 48 0.034337 TACTTGTGGGTCGTCAAGGC 59.966 55.000 9.21 0.00 43.40 4.35
48 49 2.762535 ATACTTGTGGGTCGTCAAGG 57.237 50.000 9.21 0.00 43.40 3.61
49 50 3.430374 CCCTATACTTGTGGGTCGTCAAG 60.430 52.174 0.00 0.00 44.29 3.02
50 51 2.498481 CCCTATACTTGTGGGTCGTCAA 59.502 50.000 0.00 0.00 36.32 3.18
51 52 2.104967 CCCTATACTTGTGGGTCGTCA 58.895 52.381 0.00 0.00 36.32 4.35
52 53 1.411612 CCCCTATACTTGTGGGTCGTC 59.588 57.143 0.00 0.00 39.31 4.20
53 54 1.007479 TCCCCTATACTTGTGGGTCGT 59.993 52.381 0.00 0.00 39.31 4.34
54 55 1.784358 TCCCCTATACTTGTGGGTCG 58.216 55.000 0.00 0.00 39.31 4.79
55 56 3.314693 TGATCCCCTATACTTGTGGGTC 58.685 50.000 0.00 0.00 39.31 4.46
56 57 3.431411 TGATCCCCTATACTTGTGGGT 57.569 47.619 0.00 0.00 39.31 4.51
57 58 5.072741 CAATTGATCCCCTATACTTGTGGG 58.927 45.833 0.00 0.00 40.59 4.61
58 59 5.694995 ACAATTGATCCCCTATACTTGTGG 58.305 41.667 13.59 0.00 0.00 4.17
59 60 6.428159 GCTACAATTGATCCCCTATACTTGTG 59.572 42.308 13.59 0.00 0.00 3.33
60 61 6.330250 AGCTACAATTGATCCCCTATACTTGT 59.670 38.462 13.59 0.00 0.00 3.16
61 62 6.773638 AGCTACAATTGATCCCCTATACTTG 58.226 40.000 13.59 0.00 0.00 3.16
62 63 6.789959 AGAGCTACAATTGATCCCCTATACTT 59.210 38.462 13.59 0.00 0.00 2.24
63 64 6.326970 AGAGCTACAATTGATCCCCTATACT 58.673 40.000 13.59 0.00 0.00 2.12
64 65 6.613153 AGAGCTACAATTGATCCCCTATAC 57.387 41.667 13.59 0.00 0.00 1.47
65 66 7.633018 AAAGAGCTACAATTGATCCCCTATA 57.367 36.000 13.59 0.00 0.00 1.31
66 67 6.521527 AAAGAGCTACAATTGATCCCCTAT 57.478 37.500 13.59 0.00 0.00 2.57
67 68 5.975988 AAAGAGCTACAATTGATCCCCTA 57.024 39.130 13.59 0.00 0.00 3.53
68 69 4.870021 AAAGAGCTACAATTGATCCCCT 57.130 40.909 13.59 0.72 0.00 4.79
69 70 4.035675 CGAAAAGAGCTACAATTGATCCCC 59.964 45.833 13.59 0.00 0.00 4.81
70 71 4.876107 TCGAAAAGAGCTACAATTGATCCC 59.124 41.667 13.59 0.00 0.00 3.85
71 72 6.610741 ATCGAAAAGAGCTACAATTGATCC 57.389 37.500 13.59 0.00 0.00 3.36
72 73 8.821894 ACTTATCGAAAAGAGCTACAATTGATC 58.178 33.333 13.59 4.68 0.00 2.92
73 74 8.723942 ACTTATCGAAAAGAGCTACAATTGAT 57.276 30.769 13.59 0.00 0.00 2.57
74 75 9.647797 TTACTTATCGAAAAGAGCTACAATTGA 57.352 29.630 13.59 0.00 0.00 2.57
75 76 9.907576 CTTACTTATCGAAAAGAGCTACAATTG 57.092 33.333 3.24 3.24 0.00 2.32
76 77 9.871238 TCTTACTTATCGAAAAGAGCTACAATT 57.129 29.630 0.00 0.00 0.00 2.32
77 78 9.522804 CTCTTACTTATCGAAAAGAGCTACAAT 57.477 33.333 10.09 0.00 38.75 2.71
78 79 8.521176 ACTCTTACTTATCGAAAAGAGCTACAA 58.479 33.333 17.49 0.00 45.71 2.41
79 80 7.968956 CACTCTTACTTATCGAAAAGAGCTACA 59.031 37.037 17.49 0.00 45.71 2.74
80 81 7.969508 ACACTCTTACTTATCGAAAAGAGCTAC 59.030 37.037 17.49 0.00 45.71 3.58
81 82 8.053026 ACACTCTTACTTATCGAAAAGAGCTA 57.947 34.615 17.49 0.00 45.71 3.32
82 83 6.926313 ACACTCTTACTTATCGAAAAGAGCT 58.074 36.000 17.49 0.00 45.71 4.09
83 84 6.021311 CGACACTCTTACTTATCGAAAAGAGC 60.021 42.308 17.49 7.32 45.71 4.09
84 85 7.242079 TCGACACTCTTACTTATCGAAAAGAG 58.758 38.462 16.62 16.62 46.69 2.85
85 86 7.137490 TCGACACTCTTACTTATCGAAAAGA 57.863 36.000 0.00 0.00 35.80 2.52
86 87 7.201333 GGTTCGACACTCTTACTTATCGAAAAG 60.201 40.741 8.30 0.00 46.48 2.27
87 88 6.583806 GGTTCGACACTCTTACTTATCGAAAA 59.416 38.462 8.30 0.00 46.48 2.29
88 89 6.088824 GGTTCGACACTCTTACTTATCGAAA 58.911 40.000 8.30 0.00 46.48 3.46
89 90 5.392380 GGGTTCGACACTCTTACTTATCGAA 60.392 44.000 2.99 2.99 43.90 3.71
90 91 4.095483 GGGTTCGACACTCTTACTTATCGA 59.905 45.833 0.00 0.00 36.85 3.59
91 92 4.142534 TGGGTTCGACACTCTTACTTATCG 60.143 45.833 0.00 0.00 0.00 2.92
92 93 5.320549 TGGGTTCGACACTCTTACTTATC 57.679 43.478 0.00 0.00 0.00 1.75
93 94 5.476614 GTTGGGTTCGACACTCTTACTTAT 58.523 41.667 0.00 0.00 0.00 1.73
94 95 4.557296 CGTTGGGTTCGACACTCTTACTTA 60.557 45.833 0.00 0.00 0.00 2.24
95 96 3.725490 GTTGGGTTCGACACTCTTACTT 58.275 45.455 0.00 0.00 0.00 2.24
96 97 2.288030 CGTTGGGTTCGACACTCTTACT 60.288 50.000 0.00 0.00 0.00 2.24
97 98 2.056577 CGTTGGGTTCGACACTCTTAC 58.943 52.381 0.00 0.00 0.00 2.34
98 99 1.955778 TCGTTGGGTTCGACACTCTTA 59.044 47.619 0.00 0.00 32.30 2.10
99 100 0.748450 TCGTTGGGTTCGACACTCTT 59.252 50.000 0.00 0.00 32.30 2.85
100 101 0.314302 CTCGTTGGGTTCGACACTCT 59.686 55.000 0.00 0.00 33.71 3.24
101 102 0.666577 CCTCGTTGGGTTCGACACTC 60.667 60.000 0.00 0.00 33.71 3.51
102 103 1.111116 TCCTCGTTGGGTTCGACACT 61.111 55.000 0.00 0.00 36.20 3.55
103 104 0.666577 CTCCTCGTTGGGTTCGACAC 60.667 60.000 0.00 0.00 36.20 3.67
104 105 0.824595 TCTCCTCGTTGGGTTCGACA 60.825 55.000 0.00 0.00 36.20 4.35
105 106 0.316204 TTCTCCTCGTTGGGTTCGAC 59.684 55.000 0.00 0.00 36.20 4.20
106 107 0.601558 CTTCTCCTCGTTGGGTTCGA 59.398 55.000 0.00 0.00 36.20 3.71
107 108 0.601558 TCTTCTCCTCGTTGGGTTCG 59.398 55.000 0.00 0.00 36.20 3.95
108 109 2.613223 CCTTCTTCTCCTCGTTGGGTTC 60.613 54.545 0.00 0.00 36.20 3.62
109 110 1.348036 CCTTCTTCTCCTCGTTGGGTT 59.652 52.381 0.00 0.00 36.20 4.11
110 111 0.977395 CCTTCTTCTCCTCGTTGGGT 59.023 55.000 0.00 0.00 36.20 4.51
111 112 1.267121 TCCTTCTTCTCCTCGTTGGG 58.733 55.000 0.00 0.00 36.20 4.12
112 113 3.402628 TTTCCTTCTTCTCCTCGTTGG 57.597 47.619 0.00 0.00 37.10 3.77
113 114 4.390297 GTCATTTCCTTCTTCTCCTCGTTG 59.610 45.833 0.00 0.00 0.00 4.10
114 115 4.040461 TGTCATTTCCTTCTTCTCCTCGTT 59.960 41.667 0.00 0.00 0.00 3.85
115 116 3.578716 TGTCATTTCCTTCTTCTCCTCGT 59.421 43.478 0.00 0.00 0.00 4.18
116 117 4.193826 TGTCATTTCCTTCTTCTCCTCG 57.806 45.455 0.00 0.00 0.00 4.63
117 118 5.411053 CACTTGTCATTTCCTTCTTCTCCTC 59.589 44.000 0.00 0.00 0.00 3.71
118 119 5.312079 CACTTGTCATTTCCTTCTTCTCCT 58.688 41.667 0.00 0.00 0.00 3.69
119 120 4.457257 CCACTTGTCATTTCCTTCTTCTCC 59.543 45.833 0.00 0.00 0.00 3.71
120 121 5.066593 ACCACTTGTCATTTCCTTCTTCTC 58.933 41.667 0.00 0.00 0.00 2.87
121 122 5.053978 ACCACTTGTCATTTCCTTCTTCT 57.946 39.130 0.00 0.00 0.00 2.85
122 123 5.774498 AACCACTTGTCATTTCCTTCTTC 57.226 39.130 0.00 0.00 0.00 2.87
123 124 6.154363 TGAAAACCACTTGTCATTTCCTTCTT 59.846 34.615 0.00 0.00 30.80 2.52
124 125 5.656416 TGAAAACCACTTGTCATTTCCTTCT 59.344 36.000 0.00 0.00 30.80 2.85
125 126 5.901552 TGAAAACCACTTGTCATTTCCTTC 58.098 37.500 0.00 0.00 30.80 3.46
126 127 5.930837 TGAAAACCACTTGTCATTTCCTT 57.069 34.783 0.00 0.00 30.80 3.36
127 128 5.660460 GTTGAAAACCACTTGTCATTTCCT 58.340 37.500 0.00 0.00 42.21 3.36
128 129 5.966636 GTTGAAAACCACTTGTCATTTCC 57.033 39.130 0.00 0.00 42.21 3.13
143 144 8.177119 ACTTGCAGATATTACCTTGTTGAAAA 57.823 30.769 0.00 0.00 0.00 2.29
144 145 7.759489 ACTTGCAGATATTACCTTGTTGAAA 57.241 32.000 0.00 0.00 0.00 2.69
145 146 7.665559 AGAACTTGCAGATATTACCTTGTTGAA 59.334 33.333 0.00 0.00 0.00 2.69
146 147 7.119699 CAGAACTTGCAGATATTACCTTGTTGA 59.880 37.037 0.00 0.00 0.00 3.18
147 148 7.119699 TCAGAACTTGCAGATATTACCTTGTTG 59.880 37.037 0.00 0.00 0.00 3.33
148 149 7.168219 TCAGAACTTGCAGATATTACCTTGTT 58.832 34.615 0.00 0.00 0.00 2.83
149 150 6.711277 TCAGAACTTGCAGATATTACCTTGT 58.289 36.000 0.00 0.00 0.00 3.16
150 151 7.615582 TTCAGAACTTGCAGATATTACCTTG 57.384 36.000 0.00 0.00 0.00 3.61
151 152 8.814038 AATTCAGAACTTGCAGATATTACCTT 57.186 30.769 0.00 0.00 0.00 3.50
152 153 8.680903 CAAATTCAGAACTTGCAGATATTACCT 58.319 33.333 0.00 0.00 0.00 3.08
153 154 8.462016 ACAAATTCAGAACTTGCAGATATTACC 58.538 33.333 4.22 0.00 0.00 2.85
157 158 9.236006 ACTTACAAATTCAGAACTTGCAGATAT 57.764 29.630 4.22 0.00 0.00 1.63
158 159 8.621532 ACTTACAAATTCAGAACTTGCAGATA 57.378 30.769 4.22 0.00 0.00 1.98
159 160 7.516198 ACTTACAAATTCAGAACTTGCAGAT 57.484 32.000 4.22 0.00 0.00 2.90
160 161 6.942532 ACTTACAAATTCAGAACTTGCAGA 57.057 33.333 4.22 0.00 0.00 4.26
161 162 7.865707 ACTACTTACAAATTCAGAACTTGCAG 58.134 34.615 4.22 3.86 0.00 4.41
162 163 7.801716 ACTACTTACAAATTCAGAACTTGCA 57.198 32.000 4.22 0.00 0.00 4.08
163 164 9.204570 TCTACTACTTACAAATTCAGAACTTGC 57.795 33.333 4.22 0.00 0.00 4.01
177 178 9.676861 TGCTATCAAACTACTCTACTACTTACA 57.323 33.333 0.00 0.00 0.00 2.41
180 181 9.463902 TCTTGCTATCAAACTACTCTACTACTT 57.536 33.333 0.00 0.00 0.00 2.24
181 182 9.635404 ATCTTGCTATCAAACTACTCTACTACT 57.365 33.333 0.00 0.00 0.00 2.57
192 193 9.988350 CGTTACAAATTATCTTGCTATCAAACT 57.012 29.630 0.00 0.00 0.00 2.66
193 194 9.982291 TCGTTACAAATTATCTTGCTATCAAAC 57.018 29.630 0.00 0.00 0.00 2.93
195 196 8.335356 GCTCGTTACAAATTATCTTGCTATCAA 58.665 33.333 0.00 0.00 0.00 2.57
196 197 7.494298 TGCTCGTTACAAATTATCTTGCTATCA 59.506 33.333 0.00 0.00 0.00 2.15
197 198 7.851508 TGCTCGTTACAAATTATCTTGCTATC 58.148 34.615 0.00 0.00 0.00 2.08
198 199 7.786178 TGCTCGTTACAAATTATCTTGCTAT 57.214 32.000 0.00 0.00 0.00 2.97
199 200 7.333423 ACTTGCTCGTTACAAATTATCTTGCTA 59.667 33.333 0.00 0.00 0.00 3.49
200 201 6.149474 ACTTGCTCGTTACAAATTATCTTGCT 59.851 34.615 0.00 0.00 0.00 3.91
201 202 6.314784 ACTTGCTCGTTACAAATTATCTTGC 58.685 36.000 0.00 0.00 0.00 4.01
202 203 9.262472 GTTACTTGCTCGTTACAAATTATCTTG 57.738 33.333 0.00 0.00 0.00 3.02
203 204 8.166706 CGTTACTTGCTCGTTACAAATTATCTT 58.833 33.333 0.00 0.00 0.00 2.40
204 205 7.543172 TCGTTACTTGCTCGTTACAAATTATCT 59.457 33.333 0.00 0.00 0.00 1.98
205 206 7.669098 TCGTTACTTGCTCGTTACAAATTATC 58.331 34.615 0.00 0.00 0.00 1.75
206 207 7.585286 TCGTTACTTGCTCGTTACAAATTAT 57.415 32.000 0.00 0.00 0.00 1.28
207 208 7.585286 ATCGTTACTTGCTCGTTACAAATTA 57.415 32.000 0.00 0.00 0.00 1.40
208 209 5.910637 TCGTTACTTGCTCGTTACAAATT 57.089 34.783 0.00 0.00 0.00 1.82
209 210 6.810182 ACTATCGTTACTTGCTCGTTACAAAT 59.190 34.615 0.00 0.00 0.00 2.32
210 211 6.151691 ACTATCGTTACTTGCTCGTTACAAA 58.848 36.000 0.00 0.00 0.00 2.83
211 212 5.702865 ACTATCGTTACTTGCTCGTTACAA 58.297 37.500 0.00 0.00 0.00 2.41
212 213 5.300969 ACTATCGTTACTTGCTCGTTACA 57.699 39.130 0.00 0.00 0.00 2.41
213 214 6.481984 ACTACTATCGTTACTTGCTCGTTAC 58.518 40.000 0.00 0.00 0.00 2.50
214 215 6.668541 ACTACTATCGTTACTTGCTCGTTA 57.331 37.500 0.00 0.00 0.00 3.18
215 216 5.557891 ACTACTATCGTTACTTGCTCGTT 57.442 39.130 0.00 0.00 0.00 3.85
216 217 6.092670 TGTTACTACTATCGTTACTTGCTCGT 59.907 38.462 0.00 0.00 0.00 4.18
217 218 6.481134 TGTTACTACTATCGTTACTTGCTCG 58.519 40.000 0.00 0.00 0.00 5.03
218 219 8.679288 TTTGTTACTACTATCGTTACTTGCTC 57.321 34.615 0.00 0.00 0.00 4.26
219 220 9.136952 CTTTTGTTACTACTATCGTTACTTGCT 57.863 33.333 0.00 0.00 0.00 3.91
220 221 8.919661 ACTTTTGTTACTACTATCGTTACTTGC 58.080 33.333 0.00 0.00 0.00 4.01
222 223 8.919661 GCACTTTTGTTACTACTATCGTTACTT 58.080 33.333 0.00 0.00 0.00 2.24
223 224 8.084073 TGCACTTTTGTTACTACTATCGTTACT 58.916 33.333 0.00 0.00 0.00 2.24
224 225 8.231304 TGCACTTTTGTTACTACTATCGTTAC 57.769 34.615 0.00 0.00 0.00 2.50
225 226 7.062605 GCTGCACTTTTGTTACTACTATCGTTA 59.937 37.037 0.00 0.00 0.00 3.18
226 227 6.128634 GCTGCACTTTTGTTACTACTATCGTT 60.129 38.462 0.00 0.00 0.00 3.85
227 228 5.347907 GCTGCACTTTTGTTACTACTATCGT 59.652 40.000 0.00 0.00 0.00 3.73
228 229 5.347635 TGCTGCACTTTTGTTACTACTATCG 59.652 40.000 0.00 0.00 0.00 2.92
229 230 6.721571 TGCTGCACTTTTGTTACTACTATC 57.278 37.500 0.00 0.00 0.00 2.08
230 231 6.934645 TCTTGCTGCACTTTTGTTACTACTAT 59.065 34.615 0.00 0.00 0.00 2.12
231 232 6.285224 TCTTGCTGCACTTTTGTTACTACTA 58.715 36.000 0.00 0.00 0.00 1.82
232 233 5.123227 TCTTGCTGCACTTTTGTTACTACT 58.877 37.500 0.00 0.00 0.00 2.57
233 234 5.418310 TCTTGCTGCACTTTTGTTACTAC 57.582 39.130 0.00 0.00 0.00 2.73
234 235 6.128282 GCTATCTTGCTGCACTTTTGTTACTA 60.128 38.462 0.00 0.00 0.00 1.82
235 236 5.335191 GCTATCTTGCTGCACTTTTGTTACT 60.335 40.000 0.00 0.00 0.00 2.24
236 237 4.853743 GCTATCTTGCTGCACTTTTGTTAC 59.146 41.667 0.00 0.00 0.00 2.50
237 238 4.082787 GGCTATCTTGCTGCACTTTTGTTA 60.083 41.667 0.00 0.00 0.00 2.41
238 239 3.305608 GGCTATCTTGCTGCACTTTTGTT 60.306 43.478 0.00 0.00 0.00 2.83
239 240 2.229784 GGCTATCTTGCTGCACTTTTGT 59.770 45.455 0.00 0.00 0.00 2.83
240 241 2.416431 GGGCTATCTTGCTGCACTTTTG 60.416 50.000 0.00 0.00 0.00 2.44
241 242 1.821136 GGGCTATCTTGCTGCACTTTT 59.179 47.619 0.00 0.00 0.00 2.27
242 243 1.272092 TGGGCTATCTTGCTGCACTTT 60.272 47.619 0.00 0.00 0.00 2.66
243 244 0.329261 TGGGCTATCTTGCTGCACTT 59.671 50.000 0.00 0.00 0.00 3.16
244 245 0.329261 TTGGGCTATCTTGCTGCACT 59.671 50.000 0.00 0.00 0.00 4.40
245 246 1.336125 GATTGGGCTATCTTGCTGCAC 59.664 52.381 0.00 0.00 0.00 4.57
246 247 1.683943 GATTGGGCTATCTTGCTGCA 58.316 50.000 0.00 0.00 0.00 4.41
247 248 0.957362 GGATTGGGCTATCTTGCTGC 59.043 55.000 0.00 0.00 0.00 5.25
248 249 2.653234 AGGATTGGGCTATCTTGCTG 57.347 50.000 0.00 0.00 0.00 4.41
249 250 3.677156 AAAGGATTGGGCTATCTTGCT 57.323 42.857 0.00 0.00 0.00 3.91
250 251 3.701040 TCAAAAGGATTGGGCTATCTTGC 59.299 43.478 0.00 0.00 0.00 4.01
251 252 4.340381 CCTCAAAAGGATTGGGCTATCTTG 59.660 45.833 0.00 0.00 46.67 3.02
252 253 4.540715 CCTCAAAAGGATTGGGCTATCTT 58.459 43.478 0.00 0.00 46.67 2.40
253 254 3.689569 GCCTCAAAAGGATTGGGCTATCT 60.690 47.826 11.15 0.00 46.67 1.98
254 255 2.625314 GCCTCAAAAGGATTGGGCTATC 59.375 50.000 11.15 0.00 46.67 2.08
255 256 2.024080 TGCCTCAAAAGGATTGGGCTAT 60.024 45.455 16.26 0.00 46.67 2.97
256 257 1.357420 TGCCTCAAAAGGATTGGGCTA 59.643 47.619 16.26 5.91 46.67 3.93
257 258 0.114954 TGCCTCAAAAGGATTGGGCT 59.885 50.000 16.26 0.00 46.67 5.19
258 259 0.975887 TTGCCTCAAAAGGATTGGGC 59.024 50.000 11.38 11.38 46.67 5.36
259 260 3.323751 CTTTGCCTCAAAAGGATTGGG 57.676 47.619 0.00 0.00 46.67 4.12
266 267 1.000171 GCCTGTCCTTTGCCTCAAAAG 60.000 52.381 0.00 0.00 36.99 2.27
267 268 1.039856 GCCTGTCCTTTGCCTCAAAA 58.960 50.000 0.00 0.00 32.75 2.44
268 269 0.827507 GGCCTGTCCTTTGCCTCAAA 60.828 55.000 0.00 0.00 42.01 2.69
269 270 1.228552 GGCCTGTCCTTTGCCTCAA 60.229 57.895 0.00 0.00 42.01 3.02
270 271 2.005606 TTGGCCTGTCCTTTGCCTCA 62.006 55.000 3.32 0.00 45.56 3.86
271 272 0.827507 TTTGGCCTGTCCTTTGCCTC 60.828 55.000 3.32 0.00 45.56 4.70
272 273 0.398381 TTTTGGCCTGTCCTTTGCCT 60.398 50.000 3.32 0.00 45.56 4.75
273 274 0.249868 GTTTTGGCCTGTCCTTTGCC 60.250 55.000 3.32 0.00 45.56 4.52
274 275 0.597377 CGTTTTGGCCTGTCCTTTGC 60.597 55.000 3.32 0.00 35.26 3.68
275 276 0.031994 CCGTTTTGGCCTGTCCTTTG 59.968 55.000 3.32 0.00 35.26 2.77
276 277 0.396556 ACCGTTTTGGCCTGTCCTTT 60.397 50.000 3.32 0.00 43.94 3.11
277 278 0.822121 GACCGTTTTGGCCTGTCCTT 60.822 55.000 3.32 0.00 43.94 3.36
278 279 1.228154 GACCGTTTTGGCCTGTCCT 60.228 57.895 3.32 0.00 43.94 3.85
279 280 1.228154 AGACCGTTTTGGCCTGTCC 60.228 57.895 3.32 0.00 43.94 4.02
280 281 0.250338 AGAGACCGTTTTGGCCTGTC 60.250 55.000 3.32 1.19 43.94 3.51
281 282 0.182775 AAGAGACCGTTTTGGCCTGT 59.817 50.000 3.32 0.00 43.94 4.00
282 283 2.178912 TAAGAGACCGTTTTGGCCTG 57.821 50.000 3.32 0.00 43.94 4.85
283 284 2.304761 TCATAAGAGACCGTTTTGGCCT 59.695 45.455 3.32 0.00 43.94 5.19
284 285 2.706890 TCATAAGAGACCGTTTTGGCC 58.293 47.619 0.00 0.00 43.94 5.36
285 286 5.504173 GCTTATCATAAGAGACCGTTTTGGC 60.504 44.000 8.74 0.00 43.94 4.52
286 287 5.584649 TGCTTATCATAAGAGACCGTTTTGG 59.415 40.000 8.74 0.00 46.41 3.28
287 288 6.662414 TGCTTATCATAAGAGACCGTTTTG 57.338 37.500 8.74 0.00 0.00 2.44
288 289 7.390718 ACTTTGCTTATCATAAGAGACCGTTTT 59.609 33.333 8.74 0.00 0.00 2.43
289 290 6.879458 ACTTTGCTTATCATAAGAGACCGTTT 59.121 34.615 8.74 0.00 0.00 3.60
290 291 6.313905 CACTTTGCTTATCATAAGAGACCGTT 59.686 38.462 8.74 0.00 0.00 4.44
291 292 5.812642 CACTTTGCTTATCATAAGAGACCGT 59.187 40.000 8.74 0.00 0.00 4.83
292 293 5.812642 ACACTTTGCTTATCATAAGAGACCG 59.187 40.000 8.74 0.00 0.00 4.79
293 294 7.550906 AGAACACTTTGCTTATCATAAGAGACC 59.449 37.037 8.74 0.00 0.00 3.85
294 295 8.485976 AGAACACTTTGCTTATCATAAGAGAC 57.514 34.615 8.74 0.00 0.00 3.36
295 296 8.939929 CAAGAACACTTTGCTTATCATAAGAGA 58.060 33.333 8.74 0.00 0.00 3.10
296 297 8.939929 TCAAGAACACTTTGCTTATCATAAGAG 58.060 33.333 8.74 0.00 0.00 2.85
297 298 8.846943 TCAAGAACACTTTGCTTATCATAAGA 57.153 30.769 8.74 0.00 0.00 2.10
298 299 8.180267 CCTCAAGAACACTTTGCTTATCATAAG 58.820 37.037 0.00 0.00 0.00 1.73
299 300 7.121168 CCCTCAAGAACACTTTGCTTATCATAA 59.879 37.037 0.00 0.00 0.00 1.90
300 301 6.599244 CCCTCAAGAACACTTTGCTTATCATA 59.401 38.462 0.00 0.00 0.00 2.15
301 302 5.416952 CCCTCAAGAACACTTTGCTTATCAT 59.583 40.000 0.00 0.00 0.00 2.45
302 303 4.761739 CCCTCAAGAACACTTTGCTTATCA 59.238 41.667 0.00 0.00 0.00 2.15
303 304 4.762251 ACCCTCAAGAACACTTTGCTTATC 59.238 41.667 0.00 0.00 0.00 1.75
304 305 4.729868 ACCCTCAAGAACACTTTGCTTAT 58.270 39.130 0.00 0.00 0.00 1.73
305 306 4.164843 ACCCTCAAGAACACTTTGCTTA 57.835 40.909 0.00 0.00 0.00 3.09
306 307 3.018423 ACCCTCAAGAACACTTTGCTT 57.982 42.857 0.00 0.00 0.00 3.91
307 308 2.736670 ACCCTCAAGAACACTTTGCT 57.263 45.000 0.00 0.00 0.00 3.91
308 309 3.003378 GTGTACCCTCAAGAACACTTTGC 59.997 47.826 0.00 0.00 39.27 3.68
309 310 3.247648 CGTGTACCCTCAAGAACACTTTG 59.752 47.826 0.00 0.00 40.01 2.77
310 311 3.463944 CGTGTACCCTCAAGAACACTTT 58.536 45.455 0.00 0.00 40.01 2.66
311 312 2.224209 CCGTGTACCCTCAAGAACACTT 60.224 50.000 0.00 0.00 40.01 3.16
312 313 1.343465 CCGTGTACCCTCAAGAACACT 59.657 52.381 0.00 0.00 40.01 3.55
313 314 1.607251 CCCGTGTACCCTCAAGAACAC 60.607 57.143 0.00 0.00 39.04 3.32
314 315 0.682852 CCCGTGTACCCTCAAGAACA 59.317 55.000 0.00 0.00 0.00 3.18
315 316 0.971386 TCCCGTGTACCCTCAAGAAC 59.029 55.000 0.00 0.00 0.00 3.01
316 317 1.719529 TTCCCGTGTACCCTCAAGAA 58.280 50.000 0.00 0.00 0.00 2.52
317 318 1.946984 ATTCCCGTGTACCCTCAAGA 58.053 50.000 0.00 0.00 0.00 3.02
318 319 2.781681 AATTCCCGTGTACCCTCAAG 57.218 50.000 0.00 0.00 0.00 3.02
319 320 2.372504 TGAAATTCCCGTGTACCCTCAA 59.627 45.455 0.00 0.00 0.00 3.02
320 321 1.979308 TGAAATTCCCGTGTACCCTCA 59.021 47.619 0.00 0.00 0.00 3.86
321 322 2.773993 TGAAATTCCCGTGTACCCTC 57.226 50.000 0.00 0.00 0.00 4.30
322 323 2.844348 AGATGAAATTCCCGTGTACCCT 59.156 45.455 0.00 0.00 0.00 4.34
323 324 3.277142 AGATGAAATTCCCGTGTACCC 57.723 47.619 0.00 0.00 0.00 3.69
324 325 5.019785 ACTAGATGAAATTCCCGTGTACC 57.980 43.478 0.00 0.00 0.00 3.34
325 326 5.519206 GTGACTAGATGAAATTCCCGTGTAC 59.481 44.000 0.00 0.00 0.00 2.90
326 327 5.421056 AGTGACTAGATGAAATTCCCGTGTA 59.579 40.000 0.00 0.00 0.00 2.90
327 328 4.223032 AGTGACTAGATGAAATTCCCGTGT 59.777 41.667 0.00 0.00 0.00 4.49
328 329 4.759782 AGTGACTAGATGAAATTCCCGTG 58.240 43.478 0.00 0.00 0.00 4.94
329 330 5.422214 AAGTGACTAGATGAAATTCCCGT 57.578 39.130 0.00 0.00 0.00 5.28
330 331 5.874810 TGAAAGTGACTAGATGAAATTCCCG 59.125 40.000 0.00 0.00 0.00 5.14
331 332 7.554118 TGATGAAAGTGACTAGATGAAATTCCC 59.446 37.037 0.00 0.00 0.00 3.97
332 333 8.498054 TGATGAAAGTGACTAGATGAAATTCC 57.502 34.615 0.00 0.00 0.00 3.01
333 334 9.932699 CATGATGAAAGTGACTAGATGAAATTC 57.067 33.333 0.00 0.00 0.00 2.17
334 335 9.458727 ACATGATGAAAGTGACTAGATGAAATT 57.541 29.630 0.00 0.00 0.00 1.82
335 336 9.458727 AACATGATGAAAGTGACTAGATGAAAT 57.541 29.630 0.00 0.00 0.00 2.17
336 337 8.724229 CAACATGATGAAAGTGACTAGATGAAA 58.276 33.333 0.00 0.00 0.00 2.69
337 338 7.335171 CCAACATGATGAAAGTGACTAGATGAA 59.665 37.037 4.25 0.00 0.00 2.57
338 339 6.820152 CCAACATGATGAAAGTGACTAGATGA 59.180 38.462 4.25 0.00 0.00 2.92
339 340 6.596888 ACCAACATGATGAAAGTGACTAGATG 59.403 38.462 4.25 0.00 0.00 2.90
340 341 6.715280 ACCAACATGATGAAAGTGACTAGAT 58.285 36.000 4.25 0.00 0.00 1.98
341 342 6.114187 ACCAACATGATGAAAGTGACTAGA 57.886 37.500 4.25 0.00 0.00 2.43
342 343 6.808008 AACCAACATGATGAAAGTGACTAG 57.192 37.500 4.25 0.00 0.00 2.57
343 344 8.684386 TTAAACCAACATGATGAAAGTGACTA 57.316 30.769 4.25 0.00 0.00 2.59
344 345 7.581213 TTAAACCAACATGATGAAAGTGACT 57.419 32.000 4.25 0.00 0.00 3.41
345 346 8.816640 AATTAAACCAACATGATGAAAGTGAC 57.183 30.769 4.25 0.00 0.00 3.67
346 347 7.807433 CGAATTAAACCAACATGATGAAAGTGA 59.193 33.333 4.25 0.00 0.00 3.41
347 348 7.594758 ACGAATTAAACCAACATGATGAAAGTG 59.405 33.333 4.25 0.00 0.00 3.16
348 349 7.594758 CACGAATTAAACCAACATGATGAAAGT 59.405 33.333 4.25 0.00 0.00 2.66
349 350 7.594758 ACACGAATTAAACCAACATGATGAAAG 59.405 33.333 4.25 0.00 0.00 2.62
350 351 7.429633 ACACGAATTAAACCAACATGATGAAA 58.570 30.769 4.25 0.00 0.00 2.69
351 352 6.976088 ACACGAATTAAACCAACATGATGAA 58.024 32.000 4.25 0.00 0.00 2.57
352 353 6.567687 ACACGAATTAAACCAACATGATGA 57.432 33.333 4.25 0.00 0.00 2.92
353 354 6.032355 CGAACACGAATTAAACCAACATGATG 59.968 38.462 0.00 0.00 0.00 3.07
354 355 6.083630 CGAACACGAATTAAACCAACATGAT 58.916 36.000 0.00 0.00 0.00 2.45
355 356 5.444983 CGAACACGAATTAAACCAACATGA 58.555 37.500 0.00 0.00 0.00 3.07
356 357 4.615121 CCGAACACGAATTAAACCAACATG 59.385 41.667 0.00 0.00 0.00 3.21
357 358 4.276431 ACCGAACACGAATTAAACCAACAT 59.724 37.500 0.00 0.00 0.00 2.71
358 359 3.626670 ACCGAACACGAATTAAACCAACA 59.373 39.130 0.00 0.00 0.00 3.33
359 360 4.213596 ACCGAACACGAATTAAACCAAC 57.786 40.909 0.00 0.00 0.00 3.77
360 361 5.055812 AGTACCGAACACGAATTAAACCAA 58.944 37.500 0.00 0.00 0.00 3.67
361 362 4.630111 AGTACCGAACACGAATTAAACCA 58.370 39.130 0.00 0.00 0.00 3.67
362 363 5.596268 AAGTACCGAACACGAATTAAACC 57.404 39.130 0.00 0.00 0.00 3.27
363 364 6.648502 TCAAAGTACCGAACACGAATTAAAC 58.351 36.000 0.00 0.00 0.00 2.01
364 365 6.841443 TCAAAGTACCGAACACGAATTAAA 57.159 33.333 0.00 0.00 0.00 1.52
365 366 8.531622 TTATCAAAGTACCGAACACGAATTAA 57.468 30.769 0.00 0.00 0.00 1.40
366 367 8.706492 ATTATCAAAGTACCGAACACGAATTA 57.294 30.769 0.00 0.00 0.00 1.40
367 368 7.605410 ATTATCAAAGTACCGAACACGAATT 57.395 32.000 0.00 0.00 0.00 2.17
368 369 7.605410 AATTATCAAAGTACCGAACACGAAT 57.395 32.000 0.00 0.00 0.00 3.34
369 370 7.171167 TCAAATTATCAAAGTACCGAACACGAA 59.829 33.333 0.00 0.00 0.00 3.85
370 371 6.645827 TCAAATTATCAAAGTACCGAACACGA 59.354 34.615 0.00 0.00 0.00 4.35
371 372 6.823531 TCAAATTATCAAAGTACCGAACACG 58.176 36.000 0.00 0.00 0.00 4.49
376 377 9.051679 CCACATATCAAATTATCAAAGTACCGA 57.948 33.333 0.00 0.00 0.00 4.69
377 378 8.289618 CCCACATATCAAATTATCAAAGTACCG 58.710 37.037 0.00 0.00 0.00 4.02
378 379 9.131791 ACCCACATATCAAATTATCAAAGTACC 57.868 33.333 0.00 0.00 0.00 3.34
379 380 9.950680 CACCCACATATCAAATTATCAAAGTAC 57.049 33.333 0.00 0.00 0.00 2.73
380 381 9.130661 CCACCCACATATCAAATTATCAAAGTA 57.869 33.333 0.00 0.00 0.00 2.24
381 382 7.838696 TCCACCCACATATCAAATTATCAAAGT 59.161 33.333 0.00 0.00 0.00 2.66
382 383 8.137437 GTCCACCCACATATCAAATTATCAAAG 58.863 37.037 0.00 0.00 0.00 2.77
383 384 7.069331 GGTCCACCCACATATCAAATTATCAAA 59.931 37.037 0.00 0.00 0.00 2.69
384 385 6.549364 GGTCCACCCACATATCAAATTATCAA 59.451 38.462 0.00 0.00 0.00 2.57
385 386 6.068010 GGTCCACCCACATATCAAATTATCA 58.932 40.000 0.00 0.00 0.00 2.15
386 387 6.068010 TGGTCCACCCACATATCAAATTATC 58.932 40.000 0.00 0.00 38.72 1.75
387 388 6.024563 TGGTCCACCCACATATCAAATTAT 57.975 37.500 0.00 0.00 38.72 1.28
388 389 5.044476 ACTGGTCCACCCACATATCAAATTA 60.044 40.000 0.00 0.00 38.72 1.40
389 390 4.264352 ACTGGTCCACCCACATATCAAATT 60.264 41.667 0.00 0.00 38.72 1.82
390 391 3.269381 ACTGGTCCACCCACATATCAAAT 59.731 43.478 0.00 0.00 38.72 2.32
391 392 2.647299 ACTGGTCCACCCACATATCAAA 59.353 45.455 0.00 0.00 38.72 2.69
392 393 2.026356 CACTGGTCCACCCACATATCAA 60.026 50.000 0.00 0.00 38.72 2.57
393 394 1.559219 CACTGGTCCACCCACATATCA 59.441 52.381 0.00 0.00 38.72 2.15
394 395 1.747206 GCACTGGTCCACCCACATATC 60.747 57.143 0.00 0.00 38.72 1.63
395 396 0.255890 GCACTGGTCCACCCACATAT 59.744 55.000 0.00 0.00 38.72 1.78
396 397 0.840288 AGCACTGGTCCACCCACATA 60.840 55.000 0.00 0.00 38.72 2.29
397 398 1.719063 AAGCACTGGTCCACCCACAT 61.719 55.000 0.00 0.00 38.72 3.21
398 399 1.057275 TAAGCACTGGTCCACCCACA 61.057 55.000 0.00 0.00 38.72 4.17
399 400 0.321653 CTAAGCACTGGTCCACCCAC 60.322 60.000 0.00 0.00 38.72 4.61
400 401 1.488705 CCTAAGCACTGGTCCACCCA 61.489 60.000 0.00 0.00 42.51 4.51
401 402 1.299976 CCTAAGCACTGGTCCACCC 59.700 63.158 0.00 0.00 34.29 4.61
402 403 0.321653 CACCTAAGCACTGGTCCACC 60.322 60.000 0.00 0.00 33.75 4.61
403 404 0.685097 TCACCTAAGCACTGGTCCAC 59.315 55.000 0.00 0.00 33.75 4.02
404 405 1.656587 ATCACCTAAGCACTGGTCCA 58.343 50.000 0.00 0.00 33.75 4.02
405 406 4.101741 AGAATATCACCTAAGCACTGGTCC 59.898 45.833 0.00 0.00 33.75 4.46
406 407 5.283457 AGAATATCACCTAAGCACTGGTC 57.717 43.478 0.00 0.00 33.75 4.02
407 408 5.700402 AAGAATATCACCTAAGCACTGGT 57.300 39.130 0.00 0.00 36.96 4.00
408 409 6.821388 AGTAAGAATATCACCTAAGCACTGG 58.179 40.000 0.00 0.00 0.00 4.00
409 410 7.981789 TCAAGTAAGAATATCACCTAAGCACTG 59.018 37.037 0.00 0.00 0.00 3.66
410 411 8.079211 TCAAGTAAGAATATCACCTAAGCACT 57.921 34.615 0.00 0.00 0.00 4.40
411 412 8.604890 GTTCAAGTAAGAATATCACCTAAGCAC 58.395 37.037 0.00 0.00 0.00 4.40
412 413 8.318412 TGTTCAAGTAAGAATATCACCTAAGCA 58.682 33.333 0.00 0.00 0.00 3.91
413 414 8.718102 TGTTCAAGTAAGAATATCACCTAAGC 57.282 34.615 0.00 0.00 0.00 3.09
416 417 9.444600 GGTTTGTTCAAGTAAGAATATCACCTA 57.555 33.333 0.00 0.00 0.00 3.08
417 418 8.164070 AGGTTTGTTCAAGTAAGAATATCACCT 58.836 33.333 0.00 0.00 32.52 4.00
418 419 8.336801 AGGTTTGTTCAAGTAAGAATATCACC 57.663 34.615 0.00 0.00 0.00 4.02
419 420 8.451748 GGAGGTTTGTTCAAGTAAGAATATCAC 58.548 37.037 0.00 0.00 0.00 3.06
420 421 8.383175 AGGAGGTTTGTTCAAGTAAGAATATCA 58.617 33.333 0.00 0.00 0.00 2.15
421 422 8.794335 AGGAGGTTTGTTCAAGTAAGAATATC 57.206 34.615 0.00 0.00 0.00 1.63
422 423 9.668497 GTAGGAGGTTTGTTCAAGTAAGAATAT 57.332 33.333 0.00 0.00 0.00 1.28
423 424 8.877195 AGTAGGAGGTTTGTTCAAGTAAGAATA 58.123 33.333 0.00 0.00 0.00 1.75
424 425 7.746703 AGTAGGAGGTTTGTTCAAGTAAGAAT 58.253 34.615 0.00 0.00 0.00 2.40
425 426 7.133133 AGTAGGAGGTTTGTTCAAGTAAGAA 57.867 36.000 0.00 0.00 0.00 2.52
426 427 6.742559 AGTAGGAGGTTTGTTCAAGTAAGA 57.257 37.500 0.00 0.00 0.00 2.10
427 428 8.936864 CATAAGTAGGAGGTTTGTTCAAGTAAG 58.063 37.037 0.00 0.00 0.00 2.34
428 429 8.653191 TCATAAGTAGGAGGTTTGTTCAAGTAA 58.347 33.333 0.00 0.00 0.00 2.24
429 430 8.197592 TCATAAGTAGGAGGTTTGTTCAAGTA 57.802 34.615 0.00 0.00 0.00 2.24
430 431 7.074653 TCATAAGTAGGAGGTTTGTTCAAGT 57.925 36.000 0.00 0.00 0.00 3.16
431 432 8.567285 AATCATAAGTAGGAGGTTTGTTCAAG 57.433 34.615 0.00 0.00 0.00 3.02
433 434 9.444600 GTTAATCATAAGTAGGAGGTTTGTTCA 57.555 33.333 0.00 0.00 0.00 3.18
434 435 8.890718 GGTTAATCATAAGTAGGAGGTTTGTTC 58.109 37.037 0.00 0.00 0.00 3.18
435 436 7.832685 GGGTTAATCATAAGTAGGAGGTTTGTT 59.167 37.037 0.00 0.00 0.00 2.83
436 437 7.184022 AGGGTTAATCATAAGTAGGAGGTTTGT 59.816 37.037 0.00 0.00 0.00 2.83
437 438 7.574607 AGGGTTAATCATAAGTAGGAGGTTTG 58.425 38.462 0.00 0.00 0.00 2.93
438 439 7.147355 GGAGGGTTAATCATAAGTAGGAGGTTT 60.147 40.741 0.00 0.00 0.00 3.27
439 440 6.329460 GGAGGGTTAATCATAAGTAGGAGGTT 59.671 42.308 0.00 0.00 0.00 3.50
440 441 5.845065 GGAGGGTTAATCATAAGTAGGAGGT 59.155 44.000 0.00 0.00 0.00 3.85
441 442 5.248705 GGGAGGGTTAATCATAAGTAGGAGG 59.751 48.000 0.00 0.00 0.00 4.30
442 443 5.047235 CGGGAGGGTTAATCATAAGTAGGAG 60.047 48.000 0.00 0.00 0.00 3.69
443 444 4.836736 CGGGAGGGTTAATCATAAGTAGGA 59.163 45.833 0.00 0.00 0.00 2.94
444 445 4.562963 GCGGGAGGGTTAATCATAAGTAGG 60.563 50.000 0.00 0.00 0.00 3.18
445 446 4.039973 TGCGGGAGGGTTAATCATAAGTAG 59.960 45.833 0.00 0.00 0.00 2.57
446 447 3.968649 TGCGGGAGGGTTAATCATAAGTA 59.031 43.478 0.00 0.00 0.00 2.24
447 448 2.775384 TGCGGGAGGGTTAATCATAAGT 59.225 45.455 0.00 0.00 0.00 2.24
448 449 3.485463 TGCGGGAGGGTTAATCATAAG 57.515 47.619 0.00 0.00 0.00 1.73
449 450 3.815809 CTTGCGGGAGGGTTAATCATAA 58.184 45.455 0.00 0.00 0.00 1.90
450 451 2.486548 GCTTGCGGGAGGGTTAATCATA 60.487 50.000 0.00 0.00 0.00 2.15
451 452 1.750682 GCTTGCGGGAGGGTTAATCAT 60.751 52.381 0.00 0.00 0.00 2.45
452 453 0.393808 GCTTGCGGGAGGGTTAATCA 60.394 55.000 0.00 0.00 0.00 2.57
453 454 0.393808 TGCTTGCGGGAGGGTTAATC 60.394 55.000 0.00 0.00 0.00 1.75
454 455 0.258774 ATGCTTGCGGGAGGGTTAAT 59.741 50.000 0.00 0.00 0.00 1.40
455 456 0.679640 CATGCTTGCGGGAGGGTTAA 60.680 55.000 0.00 0.00 0.00 2.01
456 457 1.077787 CATGCTTGCGGGAGGGTTA 60.078 57.895 0.00 0.00 0.00 2.85
457 458 2.361610 CATGCTTGCGGGAGGGTT 60.362 61.111 0.00 0.00 0.00 4.11
458 459 4.431131 CCATGCTTGCGGGAGGGT 62.431 66.667 0.00 0.00 32.51 4.34
459 460 3.944250 AACCATGCTTGCGGGAGGG 62.944 63.158 9.55 0.70 42.93 4.30
460 461 2.361610 AACCATGCTTGCGGGAGG 60.362 61.111 9.55 1.55 0.00 4.30
461 462 2.703798 CCAACCATGCTTGCGGGAG 61.704 63.158 9.55 3.01 0.00 4.30
462 463 2.497792 ATCCAACCATGCTTGCGGGA 62.498 55.000 9.55 7.31 0.00 5.14
463 464 2.008268 GATCCAACCATGCTTGCGGG 62.008 60.000 0.00 2.28 0.00 6.13
464 465 1.314534 TGATCCAACCATGCTTGCGG 61.315 55.000 0.00 0.00 0.00 5.69
465 466 0.179156 GTGATCCAACCATGCTTGCG 60.179 55.000 0.00 0.00 0.00 4.85
466 467 0.174162 GGTGATCCAACCATGCTTGC 59.826 55.000 0.00 0.00 40.22 4.01
467 468 1.548081 TGGTGATCCAACCATGCTTG 58.452 50.000 0.79 0.00 45.43 4.01
523 524 2.503356 GTTGACATCATCTCCCTCTGGT 59.497 50.000 0.00 0.00 0.00 4.00
577 578 4.130857 TCGCGATCTGATCTCTAAGAGTT 58.869 43.478 3.71 0.00 0.00 3.01
719 723 4.935885 GCACTGCCATAGCTACATTATC 57.064 45.455 0.00 0.00 40.80 1.75
769 773 9.023962 TCAAGCATTATATCAACAAGACCTTTT 57.976 29.630 0.00 0.00 0.00 2.27
843 847 7.826744 TGAATGTATTTGTAATGCTAGTCCACA 59.173 33.333 0.00 0.00 0.00 4.17
883 888 2.086869 TGCTTGGTGAAATGAGCTAGC 58.913 47.619 6.62 6.62 40.95 3.42
963 969 2.868583 CCATCTCGTGCCACTCTATTTG 59.131 50.000 0.00 0.00 0.00 2.32
967 973 0.033503 TCCCATCTCGTGCCACTCTA 60.034 55.000 0.00 0.00 0.00 2.43
1061 1067 3.387374 TGAATGGCAGTGGACAAACAATT 59.613 39.130 0.00 0.00 34.11 2.32
1071 1077 1.404391 GAAGAGCATGAATGGCAGTGG 59.596 52.381 0.00 0.00 0.00 4.00
1132 1138 9.745018 TTTATCCTTGGATGATCCTATTGAATC 57.255 33.333 13.44 0.00 37.46 2.52
1165 1171 3.820467 AGAGCATGAATGGTTTTGAACGA 59.180 39.130 0.00 0.00 38.85 3.85
1335 1341 0.390472 GAGCACTCAAGAAGGGTCGG 60.390 60.000 0.00 0.00 0.00 4.79
1343 1350 5.041191 AGAAAGAAAAGGAGCACTCAAGA 57.959 39.130 0.00 0.00 0.00 3.02
1521 1560 5.491070 TGATACAATGTTCAAGTCTCCTGG 58.509 41.667 0.00 0.00 0.00 4.45
1536 1575 4.269183 TCCACTTGCGGAATTGATACAAT 58.731 39.130 8.60 0.00 29.93 2.71
1596 1635 5.537674 AGGAGATATGGTTCAAATCATTGGC 59.462 40.000 0.00 0.00 37.15 4.52
1638 1677 6.493115 CCTTGTAGATCAGATGAGGACATACT 59.507 42.308 0.00 0.00 36.82 2.12
1779 1819 8.918202 TGTTTCTTATGAAAGTCCATGTAGTT 57.082 30.769 4.14 0.00 42.15 2.24
1790 1830 9.252962 AGTTTTGCAGATTGTTTCTTATGAAAG 57.747 29.630 4.14 0.00 42.15 2.62
1831 1873 6.192234 ACATGTCATCTTGCTTTGATTCTC 57.808 37.500 0.00 0.00 0.00 2.87
1832 1874 6.433404 AGAACATGTCATCTTGCTTTGATTCT 59.567 34.615 0.00 0.00 0.00 2.40
1908 1950 3.003275 CGTAGTGCCTTTGCTTTTTCTGA 59.997 43.478 0.00 0.00 38.71 3.27
1932 1981 5.732633 TCGATTCATTGGGCATTTGAAAAT 58.267 33.333 0.42 0.00 33.45 1.82
1961 2010 6.817765 TTTGAGTCCTTGGTATTGATGAAC 57.182 37.500 0.00 0.00 0.00 3.18
2031 2080 6.386654 GGTGAATTGTTTACACACCTTATGG 58.613 40.000 11.72 0.00 44.91 2.74
2566 2632 3.308438 AACTTGATGTTGGCTGAATGC 57.692 42.857 0.00 0.00 37.52 3.56
2599 2686 0.178915 TTCTCCACTCCTTCCCCGAA 60.179 55.000 0.00 0.00 0.00 4.30
2651 2739 6.741724 AGGGATACTTTCAAACAATATGGGT 58.258 36.000 0.00 0.00 0.00 4.51
2770 2862 0.885196 TAAGCCGTTTTCATGTGCCC 59.115 50.000 0.00 0.00 0.00 5.36
2917 3010 9.233232 ACAAATAATTCTGAGAAACGACAAAAC 57.767 29.630 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.