Multiple sequence alignment - TraesCS3D01G221800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G221800 chr3D 100.000 5512 0 0 1 5512 302264801 302270312 0.000000e+00 10179.0
1 TraesCS3D01G221800 chr3D 91.875 320 13 6 2224 2533 570946363 570946679 8.480000e-118 435.0
2 TraesCS3D01G221800 chr3A 90.980 1674 104 31 3860 5512 432375148 432373501 0.000000e+00 2211.0
3 TraesCS3D01G221800 chr3A 85.743 1515 104 57 1699 3143 432377058 432375586 0.000000e+00 1498.0
4 TraesCS3D01G221800 chr3A 95.220 523 22 1 617 1136 432378214 432377692 0.000000e+00 824.0
5 TraesCS3D01G221800 chr3A 91.812 574 38 5 1 571 432380618 432380051 0.000000e+00 791.0
6 TraesCS3D01G221800 chr3A 92.708 480 29 5 1137 1612 432377664 432377187 0.000000e+00 688.0
7 TraesCS3D01G221800 chr3A 95.110 409 6 2 3468 3862 432375587 432375179 2.800000e-177 632.0
8 TraesCS3D01G221800 chr3B 86.691 1946 98 59 1272 3114 418721655 418719768 0.000000e+00 2010.0
9 TraesCS3D01G221800 chr3B 93.521 957 36 10 3860 4799 418719035 418718088 0.000000e+00 1400.0
10 TraesCS3D01G221800 chr3B 94.206 535 19 4 611 1136 418722312 418721781 0.000000e+00 806.0
11 TraesCS3D01G221800 chr3B 95.074 406 9 1 3468 3862 418719481 418719076 3.620000e-176 628.0
12 TraesCS3D01G221800 chr3B 91.449 421 30 3 1 420 418723216 418722801 1.720000e-159 573.0
13 TraesCS3D01G221800 chr3B 94.545 330 17 1 3140 3469 822384918 822385246 4.930000e-140 508.0
14 TraesCS3D01G221800 chr3B 94.294 333 13 3 3138 3469 551965669 551965342 6.370000e-139 505.0
15 TraesCS3D01G221800 chr3B 93.235 340 20 3 3131 3470 699796771 699796435 1.070000e-136 497.0
16 TraesCS3D01G221800 chr7D 95.441 329 14 1 3142 3470 301954828 301954501 1.760000e-144 523.0
17 TraesCS3D01G221800 chr7D 94.135 341 19 1 3129 3469 210445934 210446273 8.190000e-143 518.0
18 TraesCS3D01G221800 chr5D 95.122 328 15 1 3142 3469 124799837 124799511 2.940000e-142 516.0
19 TraesCS3D01G221800 chr5D 91.857 307 12 5 2237 2533 557305871 557305568 3.070000e-112 416.0
20 TraesCS3D01G221800 chr5D 100.000 34 0 0 2215 2248 557305905 557305872 4.610000e-06 63.9
21 TraesCS3D01G221800 chr4D 94.595 333 15 3 3139 3469 82458000 82457669 3.810000e-141 512.0
22 TraesCS3D01G221800 chr4D 94.529 329 18 0 3141 3469 418889337 418889009 4.930000e-140 508.0
23 TraesCS3D01G221800 chr7B 94.012 334 17 3 3138 3471 530307814 530307484 2.290000e-138 503.0
24 TraesCS3D01G221800 chr2A 90.432 324 20 4 2215 2530 725178054 725178374 3.070000e-112 416.0
25 TraesCS3D01G221800 chrUn 98.077 52 1 0 2545 2596 264960859 264960910 2.110000e-14 91.6
26 TraesCS3D01G221800 chrUn 100.000 49 0 0 2548 2596 359434601 359434553 2.110000e-14 91.6
27 TraesCS3D01G221800 chrUn 94.444 54 2 1 2480 2533 264960815 264960867 1.270000e-11 82.4
28 TraesCS3D01G221800 chrUn 94.444 54 2 1 2480 2533 359434648 359434596 1.270000e-11 82.4
29 TraesCS3D01G221800 chr7A 98.077 52 1 0 2545 2596 544855847 544855898 2.110000e-14 91.6
30 TraesCS3D01G221800 chr6A 100.000 49 0 0 2548 2596 567412105 567412057 2.110000e-14 91.6
31 TraesCS3D01G221800 chr6A 94.444 54 2 1 2480 2533 567412152 567412100 1.270000e-11 82.4
32 TraesCS3D01G221800 chr5A 98.077 52 1 0 2545 2596 631886298 631886349 2.110000e-14 91.6
33 TraesCS3D01G221800 chr4A 98.077 52 1 0 2545 2596 608905354 608905405 2.110000e-14 91.6
34 TraesCS3D01G221800 chr4A 94.444 54 2 1 2480 2533 608905310 608905362 1.270000e-11 82.4
35 TraesCS3D01G221800 chr2B 100.000 49 0 0 2548 2596 680547676 680547628 2.110000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G221800 chr3D 302264801 302270312 5511 False 10179.000000 10179 100.000000 1 5512 1 chr3D.!!$F1 5511
1 TraesCS3D01G221800 chr3A 432373501 432380618 7117 True 1107.333333 2211 91.928833 1 5512 6 chr3A.!!$R1 5511
2 TraesCS3D01G221800 chr3B 418718088 418723216 5128 True 1083.400000 2010 92.188200 1 4799 5 chr3B.!!$R3 4798

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
495 498 0.263172 TTTGGTGGGACATGGGTGTT 59.737 50.0 0.00 0.00 44.52 3.32 F
1234 3333 0.244721 GGGAAGAAATGCACAGCACC 59.755 55.0 0.00 0.00 43.04 5.01 F
1828 3977 0.250684 TGGGCATTGAAGAGCACGAA 60.251 50.0 0.00 0.00 36.83 3.85 F
2248 4441 0.322648 TCACATACAGCAGCAGCAGT 59.677 50.0 3.17 3.77 45.49 4.40 F
3092 5341 0.571197 GCGTCGAGATTAAACCGAGC 59.429 55.0 0.00 0.00 32.65 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1481 3585 0.033991 TCCTCCTCGTCCTCTTCCAG 60.034 60.0 0.00 0.00 0.00 3.86 R
2310 4517 0.035820 GGCCTTCACCGTCCATGTTA 60.036 55.0 0.00 0.00 0.00 2.41 R
2998 5243 0.109179 GTGCGTACCATGGACGTGTA 60.109 55.0 26.56 16.34 42.31 2.90 R
3098 5347 0.600782 TCTTAACAACGGCGGACCAC 60.601 55.0 13.24 0.00 34.57 4.16 R
4809 7139 0.692756 TATTGGATGTCCCGCCTGGA 60.693 55.0 0.00 0.00 42.41 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 24 5.344743 CATATCCACTACACACTGTTCCT 57.655 43.478 0.00 0.00 0.00 3.36
33 35 5.007682 ACACACTGTTCCTGTTTAACACTT 58.992 37.500 0.00 0.00 33.45 3.16
74 76 6.838382 ACCTTTGTAGTTAAGAACATGGTCT 58.162 36.000 7.68 7.68 31.46 3.85
139 141 7.066284 CACCGTTTCATCCTCATCTTCTAAAAT 59.934 37.037 0.00 0.00 0.00 1.82
145 147 9.519191 TTCATCCTCATCTTCTAAAATGAAACA 57.481 29.630 0.00 0.00 31.81 2.83
213 215 9.424319 TGATTCAAAGTGAGTAACTAGAACATC 57.576 33.333 0.00 0.00 38.56 3.06
216 218 9.778741 TTCAAAGTGAGTAACTAGAACATCAAT 57.221 29.630 0.00 0.00 38.56 2.57
259 261 2.180674 GGACACTTTCCGGGCATTC 58.819 57.895 0.00 0.00 33.46 2.67
260 262 0.608035 GGACACTTTCCGGGCATTCA 60.608 55.000 0.00 0.00 33.46 2.57
302 304 2.452937 GGGTGGAGGGTATCTGGGC 61.453 68.421 0.00 0.00 0.00 5.36
450 452 1.048724 CGGAGGAGGGCAGGATTGTA 61.049 60.000 0.00 0.00 0.00 2.41
463 465 4.668289 CAGGATTGTAAAAATACGTGGGC 58.332 43.478 0.00 0.00 0.00 5.36
466 468 4.201980 GGATTGTAAAAATACGTGGGCTCC 60.202 45.833 0.00 0.00 0.00 4.70
495 498 0.263172 TTTGGTGGGACATGGGTGTT 59.737 50.000 0.00 0.00 44.52 3.32
511 776 1.003839 GTTGGAGTCCGACATGGCA 60.004 57.895 22.83 0.00 37.82 4.92
558 824 3.936772 GATTTGGGTCCGGGCTGCA 62.937 63.158 5.77 0.00 0.00 4.41
566 837 3.204827 CCGGGCTGCAGGATTTCG 61.205 66.667 17.12 0.00 0.00 3.46
571 842 0.659957 GGCTGCAGGATTTCGACATC 59.340 55.000 17.12 2.83 0.00 3.06
572 843 0.659957 GCTGCAGGATTTCGACATCC 59.340 55.000 20.81 20.81 43.04 3.51
583 2616 1.627864 TCGACATCCAGACCAGTTCA 58.372 50.000 0.00 0.00 0.00 3.18
600 2633 3.055530 AGTTCAGACCGATTTGCTGATCT 60.056 43.478 0.00 0.00 38.35 2.75
603 2636 3.701542 TCAGACCGATTTGCTGATCTACT 59.298 43.478 0.00 0.00 34.02 2.57
606 2639 4.872691 AGACCGATTTGCTGATCTACTTTG 59.127 41.667 0.00 0.00 0.00 2.77
629 2691 1.202463 TGACATTTGCGGGTGTTTTGG 60.202 47.619 0.00 0.00 0.00 3.28
697 2759 3.391506 TGATGTCTCCAACAGTGTGAG 57.608 47.619 0.00 0.00 42.37 3.51
838 2903 2.336554 TGTTCCAACGTAGTACGAGC 57.663 50.000 28.47 9.12 45.00 5.03
1105 3177 1.798813 GACCACCTACGAGCTGTTTTG 59.201 52.381 0.00 0.00 0.00 2.44
1106 3178 1.156736 CCACCTACGAGCTGTTTTGG 58.843 55.000 0.00 0.00 0.00 3.28
1114 3186 0.875059 GAGCTGTTTTGGTTCTCCGG 59.125 55.000 0.00 0.00 36.30 5.14
1122 3194 2.364448 GGTTCTCCGGCTCCCTCT 60.364 66.667 0.00 0.00 0.00 3.69
1150 3249 4.245660 CTGCAAGTTCTTCTCCGTTCATA 58.754 43.478 0.00 0.00 0.00 2.15
1175 3274 6.712095 AGCTTCAAATCTTGTCAGTGAACATA 59.288 34.615 0.00 0.00 0.00 2.29
1199 3298 0.588737 TTCTACGCGCATGCACAAAA 59.411 45.000 19.57 0.80 42.97 2.44
1234 3333 0.244721 GGGAAGAAATGCACAGCACC 59.755 55.000 0.00 0.00 43.04 5.01
1272 3371 7.475137 TTTTCTCTCTCCCTCTCTCTTTAAG 57.525 40.000 0.00 0.00 0.00 1.85
1273 3372 5.789574 TCTCTCTCCCTCTCTCTTTAAGT 57.210 43.478 0.00 0.00 0.00 2.24
1281 3380 4.394300 CCCTCTCTCTTTAAGTTGCATGTG 59.606 45.833 0.00 0.00 0.00 3.21
1481 3585 2.123726 ATTTCCTGATGGGCGGCC 60.124 61.111 23.42 23.42 34.39 6.13
1502 3606 0.256464 GGAAGAGGACGAGGAGGAGA 59.744 60.000 0.00 0.00 0.00 3.71
1612 3716 1.599047 CCTCTCACCGGTCAGCAAT 59.401 57.895 2.59 0.00 0.00 3.56
1613 3717 0.742281 CCTCTCACCGGTCAGCAATG 60.742 60.000 2.59 0.00 0.00 2.82
1615 3719 2.359850 TCACCGGTCAGCAATGCC 60.360 61.111 2.59 0.00 0.00 4.40
1616 3720 3.803082 CACCGGTCAGCAATGCCG 61.803 66.667 2.59 0.00 44.55 5.69
1621 3725 2.486966 GTCAGCAATGCCGCCTTC 59.513 61.111 0.00 0.00 0.00 3.46
1622 3726 2.033911 TCAGCAATGCCGCCTTCA 59.966 55.556 0.00 0.00 0.00 3.02
1624 3728 2.034687 AGCAATGCCGCCTTCACT 59.965 55.556 0.00 0.00 0.00 3.41
1625 3729 1.604593 AGCAATGCCGCCTTCACTT 60.605 52.632 0.00 0.00 0.00 3.16
1626 3730 0.322456 AGCAATGCCGCCTTCACTTA 60.322 50.000 0.00 0.00 0.00 2.24
1627 3731 0.525761 GCAATGCCGCCTTCACTTAA 59.474 50.000 0.00 0.00 0.00 1.85
1628 3732 1.732405 GCAATGCCGCCTTCACTTAAC 60.732 52.381 0.00 0.00 0.00 2.01
1629 3733 1.812571 CAATGCCGCCTTCACTTAACT 59.187 47.619 0.00 0.00 0.00 2.24
1635 3739 3.071479 CCGCCTTCACTTAACTTGCTTA 58.929 45.455 0.00 0.00 0.00 3.09
1636 3740 3.500680 CCGCCTTCACTTAACTTGCTTAA 59.499 43.478 0.00 0.00 0.00 1.85
1637 3741 4.378459 CCGCCTTCACTTAACTTGCTTAAG 60.378 45.833 0.00 0.00 44.97 1.85
1638 3742 4.451096 CGCCTTCACTTAACTTGCTTAAGA 59.549 41.667 6.67 0.00 42.93 2.10
1639 3743 5.122396 CGCCTTCACTTAACTTGCTTAAGAT 59.878 40.000 6.67 0.00 42.93 2.40
1641 3745 6.673316 GCCTTCACTTAACTTGCTTAAGATCG 60.673 42.308 6.67 0.00 42.93 3.69
1642 3746 6.183360 CCTTCACTTAACTTGCTTAAGATCGG 60.183 42.308 6.67 0.00 42.93 4.18
1644 3748 4.391830 CACTTAACTTGCTTAAGATCGGCA 59.608 41.667 6.67 0.00 42.93 5.69
1646 3750 5.065218 ACTTAACTTGCTTAAGATCGGCATG 59.935 40.000 6.67 2.50 42.93 4.06
1647 3751 2.991250 ACTTGCTTAAGATCGGCATGT 58.009 42.857 6.67 13.87 38.75 3.21
1648 3752 2.939103 ACTTGCTTAAGATCGGCATGTC 59.061 45.455 6.67 0.00 39.12 3.06
1649 3753 1.953559 TGCTTAAGATCGGCATGTCC 58.046 50.000 6.67 0.00 0.00 4.02
1650 3754 1.209261 TGCTTAAGATCGGCATGTCCA 59.791 47.619 6.67 0.00 34.01 4.02
1651 3755 2.288666 GCTTAAGATCGGCATGTCCAA 58.711 47.619 6.67 0.00 34.01 3.53
1652 3756 2.682856 GCTTAAGATCGGCATGTCCAAA 59.317 45.455 6.67 0.00 34.01 3.28
1653 3757 3.128589 GCTTAAGATCGGCATGTCCAAAA 59.871 43.478 6.67 0.00 34.01 2.44
1682 3811 1.739093 CGGCATGTAGTACACGCACG 61.739 60.000 21.64 17.67 39.34 5.34
1686 3815 2.855963 GCATGTAGTACACGCACGTAAT 59.144 45.455 16.06 0.00 37.25 1.89
1687 3816 4.037021 GCATGTAGTACACGCACGTAATA 58.963 43.478 16.06 0.00 37.25 0.98
1689 3818 5.174398 GCATGTAGTACACGCACGTAATAAT 59.826 40.000 16.06 0.00 37.25 1.28
1690 3819 6.360414 GCATGTAGTACACGCACGTAATAATA 59.640 38.462 16.06 0.00 37.25 0.98
1691 3820 7.409026 GCATGTAGTACACGCACGTAATAATAG 60.409 40.741 16.06 0.00 37.25 1.73
1692 3821 7.015226 TGTAGTACACGCACGTAATAATAGT 57.985 36.000 0.00 0.00 0.00 2.12
1695 3824 9.599322 GTAGTACACGCACGTAATAATAGTTAT 57.401 33.333 0.00 0.00 0.00 1.89
1697 3826 9.599322 AGTACACGCACGTAATAATAGTTATAC 57.401 33.333 0.00 0.00 0.00 1.47
1729 3878 1.137086 CCAGAAATCTCGTCCACGGAT 59.863 52.381 0.00 0.00 40.29 4.18
1812 3961 1.227380 GTGGCGCTACTCTGATGGG 60.227 63.158 17.55 0.00 0.00 4.00
1828 3977 0.250684 TGGGCATTGAAGAGCACGAA 60.251 50.000 0.00 0.00 36.83 3.85
1852 4002 2.819595 CTGCCATGGGTTCGGACG 60.820 66.667 15.13 0.00 0.00 4.79
1873 4023 4.051922 CGACCACTGATCCATTAAGTAGC 58.948 47.826 0.00 0.00 0.00 3.58
1874 4024 4.441495 CGACCACTGATCCATTAAGTAGCA 60.441 45.833 0.00 0.00 0.00 3.49
1875 4025 5.615289 GACCACTGATCCATTAAGTAGCAT 58.385 41.667 0.00 0.00 0.00 3.79
1876 4026 6.516693 CGACCACTGATCCATTAAGTAGCATA 60.517 42.308 0.00 0.00 0.00 3.14
1877 4027 6.763355 ACCACTGATCCATTAAGTAGCATAG 58.237 40.000 0.00 0.00 0.00 2.23
1927 4077 2.423538 GTCCGTTCATGGGAAATCAAGG 59.576 50.000 0.00 0.00 34.80 3.61
1931 4081 3.305950 CGTTCATGGGAAATCAAGGCAAA 60.306 43.478 0.00 0.00 34.13 3.68
1940 4104 6.495181 TGGGAAATCAAGGCAAAACATTACTA 59.505 34.615 0.00 0.00 0.00 1.82
1941 4105 6.811665 GGGAAATCAAGGCAAAACATTACTAC 59.188 38.462 0.00 0.00 0.00 2.73
1943 4107 7.755373 GGAAATCAAGGCAAAACATTACTACTC 59.245 37.037 0.00 0.00 0.00 2.59
1944 4108 5.856126 TCAAGGCAAAACATTACTACTCG 57.144 39.130 0.00 0.00 0.00 4.18
1954 4118 4.995124 ACATTACTACTCGTTAGTGGCAG 58.005 43.478 9.01 0.00 41.48 4.85
1966 4143 2.795231 AGTGGCAGTACTCGGTAGTA 57.205 50.000 0.00 0.00 37.15 1.82
1978 4155 7.793927 GTACTCGGTAGTAGTACATTACCTT 57.206 40.000 13.88 4.47 45.64 3.50
1994 4171 2.371306 ACCTTAACGGTGCACAACTTT 58.629 42.857 20.43 7.86 46.80 2.66
1995 4172 2.098443 ACCTTAACGGTGCACAACTTTG 59.902 45.455 20.43 4.22 46.80 2.77
1996 4173 2.098443 CCTTAACGGTGCACAACTTTGT 59.902 45.455 20.43 3.79 43.36 2.83
1997 4174 3.312973 CCTTAACGGTGCACAACTTTGTA 59.687 43.478 20.43 0.00 39.91 2.41
1998 4175 4.523813 CTTAACGGTGCACAACTTTGTAG 58.476 43.478 20.43 1.37 39.91 2.74
1999 4176 2.032680 ACGGTGCACAACTTTGTAGT 57.967 45.000 20.43 1.14 39.91 2.73
2000 4177 3.182341 ACGGTGCACAACTTTGTAGTA 57.818 42.857 20.43 0.00 39.91 1.82
2001 4178 3.735591 ACGGTGCACAACTTTGTAGTAT 58.264 40.909 20.43 0.00 39.91 2.12
2002 4179 4.131596 ACGGTGCACAACTTTGTAGTATT 58.868 39.130 20.43 0.00 39.91 1.89
2006 4183 6.368213 GGTGCACAACTTTGTAGTATTGTAC 58.632 40.000 20.43 0.00 39.91 2.90
2010 4187 8.145767 TGCACAACTTTGTAGTATTGTACTAGT 58.854 33.333 0.00 0.00 41.59 2.57
2034 4220 5.253330 AGCATGGAGAGATCTAGTAGTAGC 58.747 45.833 0.00 0.00 0.00 3.58
2095 4281 3.064820 CGGTACATGGTGCATAAAAGTCC 59.935 47.826 0.00 0.00 0.00 3.85
2141 4331 0.618458 GTCTTATGCAGTGGGGTGGA 59.382 55.000 0.00 0.00 0.00 4.02
2191 4381 2.767505 CGGCCAGTAATGAACCTATCC 58.232 52.381 2.24 0.00 0.00 2.59
2242 4435 2.393271 ACTCCTTCACATACAGCAGC 57.607 50.000 0.00 0.00 0.00 5.25
2245 4438 0.731417 CCTTCACATACAGCAGCAGC 59.269 55.000 0.00 0.00 42.56 5.25
2247 4440 1.397343 CTTCACATACAGCAGCAGCAG 59.603 52.381 3.17 0.00 45.49 4.24
2248 4441 0.322648 TCACATACAGCAGCAGCAGT 59.677 50.000 3.17 3.77 45.49 4.40
2249 4442 1.550072 TCACATACAGCAGCAGCAGTA 59.450 47.619 8.73 8.73 45.10 2.74
2253 4446 3.181482 ACATACAGCAGCAGCAGTAGTAG 60.181 47.826 11.74 7.10 44.40 2.57
2270 4463 7.869429 GCAGTAGTAGTAGGTTTTGTTTGACTA 59.131 37.037 0.00 0.00 0.00 2.59
2275 4468 3.202829 AGGTTTTGTTTGACTAGCGGA 57.797 42.857 0.00 0.00 0.00 5.54
2276 4469 3.139077 AGGTTTTGTTTGACTAGCGGAG 58.861 45.455 0.00 0.00 0.00 4.63
2278 4471 4.060205 GGTTTTGTTTGACTAGCGGAGTA 58.940 43.478 0.00 0.00 39.06 2.59
2279 4472 4.512571 GGTTTTGTTTGACTAGCGGAGTAA 59.487 41.667 0.00 0.00 39.06 2.24
2280 4473 5.438117 GTTTTGTTTGACTAGCGGAGTAAC 58.562 41.667 0.00 0.00 39.06 2.50
2281 4474 2.937591 TGTTTGACTAGCGGAGTAACG 58.062 47.619 0.00 0.00 39.06 3.18
2282 4475 2.294233 TGTTTGACTAGCGGAGTAACGT 59.706 45.455 0.00 0.00 39.06 3.99
2284 4477 4.023279 TGTTTGACTAGCGGAGTAACGTTA 60.023 41.667 3.29 3.29 39.06 3.18
2285 4478 3.747099 TGACTAGCGGAGTAACGTTAC 57.253 47.619 27.23 27.23 39.06 2.50
2286 4479 3.338249 TGACTAGCGGAGTAACGTTACT 58.662 45.455 34.88 34.88 46.11 2.24
2302 4509 7.473027 AACGTTACTCATATTTATTCACCCG 57.527 36.000 0.00 0.00 0.00 5.28
2307 4514 9.754382 GTTACTCATATTTATTCACCCGTCTTA 57.246 33.333 0.00 0.00 0.00 2.10
2309 4516 6.929606 ACTCATATTTATTCACCCGTCTTAGC 59.070 38.462 0.00 0.00 0.00 3.09
2310 4517 7.062749 TCATATTTATTCACCCGTCTTAGCT 57.937 36.000 0.00 0.00 0.00 3.32
2375 4588 5.683743 GCAGCGATTTATTTATTTAACGCCA 59.316 36.000 0.00 0.00 44.61 5.69
2524 4739 6.697019 CCTTTTAACTTGTTCCTGTTCACATG 59.303 38.462 0.00 0.00 0.00 3.21
2531 4746 1.596603 TCCTGTTCACATGCACAGTG 58.403 50.000 13.47 13.47 37.55 3.66
2532 4747 1.134128 TCCTGTTCACATGCACAGTGT 60.134 47.619 17.67 3.46 37.55 3.55
2533 4748 2.103941 TCCTGTTCACATGCACAGTGTA 59.896 45.455 17.67 8.31 37.55 2.90
2534 4749 2.224079 CCTGTTCACATGCACAGTGTAC 59.776 50.000 18.15 18.15 37.55 2.90
2592 4807 2.591429 CCAAGCCTCACGTGCACA 60.591 61.111 18.64 0.00 0.00 4.57
2599 4814 1.577328 CCTCACGTGCACATGGAACC 61.577 60.000 18.64 0.00 0.00 3.62
2723 4944 0.772384 TTTTAGGAAACGGGCAGGGA 59.228 50.000 0.00 0.00 0.00 4.20
2724 4945 0.772384 TTTAGGAAACGGGCAGGGAA 59.228 50.000 0.00 0.00 0.00 3.97
2758 4981 1.263356 TCAAGTAGGGAAGACGGTGG 58.737 55.000 0.00 0.00 0.00 4.61
2832 5056 1.528129 GAGGACCTGCTTGTTCCTTG 58.472 55.000 0.00 0.00 0.00 3.61
2861 5086 3.004315 TCATTTCCGTTGAAAGGTCAAGC 59.996 43.478 0.00 0.00 44.44 4.01
2882 5111 1.251251 ACTCAAGGCAATGCTTGTCC 58.749 50.000 4.82 0.00 35.39 4.02
2883 5112 1.250328 CTCAAGGCAATGCTTGTCCA 58.750 50.000 4.82 0.00 35.39 4.02
2886 5115 1.068055 CAAGGCAATGCTTGTCCAGTC 60.068 52.381 4.82 0.00 35.39 3.51
2963 5192 4.210331 GGAACATCAGCCCACTAATTGAT 58.790 43.478 0.00 0.00 0.00 2.57
2995 5240 5.098211 GCAACTTCATTGAGCAAATCCTAC 58.902 41.667 0.00 0.00 41.23 3.18
2996 5241 5.335897 GCAACTTCATTGAGCAAATCCTACA 60.336 40.000 0.00 0.00 41.23 2.74
2997 5242 5.886960 ACTTCATTGAGCAAATCCTACAC 57.113 39.130 0.00 0.00 0.00 2.90
2998 5243 5.564550 ACTTCATTGAGCAAATCCTACACT 58.435 37.500 0.00 0.00 0.00 3.55
2999 5244 6.711277 ACTTCATTGAGCAAATCCTACACTA 58.289 36.000 0.00 0.00 0.00 2.74
3043 5288 3.926616 TGCTTAACTTGCAGACTACTCC 58.073 45.455 0.00 0.00 35.31 3.85
3044 5289 3.323691 TGCTTAACTTGCAGACTACTCCA 59.676 43.478 0.00 0.00 35.31 3.86
3092 5341 0.571197 GCGTCGAGATTAAACCGAGC 59.429 55.000 0.00 0.00 32.65 5.03
3098 5347 3.678072 TCGAGATTAAACCGAGCTGTTTG 59.322 43.478 11.39 0.00 38.79 2.93
3101 5350 3.502211 AGATTAAACCGAGCTGTTTGTGG 59.498 43.478 11.39 0.00 38.79 4.17
3114 5363 0.463295 TTTGTGGTCCGCCGTTGTTA 60.463 50.000 0.00 0.00 37.67 2.41
3117 5366 0.600782 GTGGTCCGCCGTTGTTAAGA 60.601 55.000 0.00 0.00 37.67 2.10
3118 5367 0.106335 TGGTCCGCCGTTGTTAAGAA 59.894 50.000 0.00 0.00 37.67 2.52
3119 5368 1.228533 GGTCCGCCGTTGTTAAGAAA 58.771 50.000 0.00 0.00 0.00 2.52
3120 5369 1.069703 GGTCCGCCGTTGTTAAGAAAC 60.070 52.381 0.00 0.00 36.07 2.78
3121 5370 1.869132 GTCCGCCGTTGTTAAGAAACT 59.131 47.619 0.00 0.00 36.51 2.66
3122 5371 2.288729 GTCCGCCGTTGTTAAGAAACTT 59.711 45.455 0.00 0.00 36.51 2.66
3123 5372 2.944349 TCCGCCGTTGTTAAGAAACTTT 59.056 40.909 0.00 0.00 36.51 2.66
3124 5373 3.040099 CCGCCGTTGTTAAGAAACTTTG 58.960 45.455 0.00 0.00 36.51 2.77
3125 5374 2.466205 CGCCGTTGTTAAGAAACTTTGC 59.534 45.455 0.00 0.00 36.51 3.68
3127 5376 4.048504 GCCGTTGTTAAGAAACTTTGCAT 58.951 39.130 0.00 0.00 36.51 3.96
3128 5377 5.216648 GCCGTTGTTAAGAAACTTTGCATA 58.783 37.500 0.00 0.00 36.51 3.14
3129 5378 5.342259 GCCGTTGTTAAGAAACTTTGCATAG 59.658 40.000 2.27 2.27 36.51 2.23
3130 5379 6.664515 CCGTTGTTAAGAAACTTTGCATAGA 58.335 36.000 11.39 0.00 36.51 1.98
3131 5380 6.797033 CCGTTGTTAAGAAACTTTGCATAGAG 59.203 38.462 11.39 1.00 36.51 2.43
3134 5383 9.899226 GTTGTTAAGAAACTTTGCATAGAGATT 57.101 29.630 11.39 3.18 36.51 2.40
3145 5394 9.810545 ACTTTGCATAGAGATTAGTTTCTACTC 57.189 33.333 11.39 0.00 35.78 2.59
3149 5398 7.231722 TGCATAGAGATTAGTTTCTACTCCCTC 59.768 40.741 0.00 0.00 35.78 4.30
3150 5399 7.309560 GCATAGAGATTAGTTTCTACTCCCTCC 60.310 44.444 0.00 0.00 35.78 4.30
3153 5402 7.193338 AGAGATTAGTTTCTACTCCCTCCTTT 58.807 38.462 0.00 0.00 35.78 3.11
3154 5403 7.343574 AGAGATTAGTTTCTACTCCCTCCTTTC 59.656 40.741 0.00 0.00 35.78 2.62
3155 5404 6.384595 AGATTAGTTTCTACTCCCTCCTTTCC 59.615 42.308 0.00 0.00 35.78 3.13
3156 5405 2.832733 AGTTTCTACTCCCTCCTTTCCG 59.167 50.000 0.00 0.00 0.00 4.30
3157 5406 1.861982 TTCTACTCCCTCCTTTCCGG 58.138 55.000 0.00 0.00 0.00 5.14
3158 5407 0.708802 TCTACTCCCTCCTTTCCGGT 59.291 55.000 0.00 0.00 0.00 5.28
3159 5408 1.078324 TCTACTCCCTCCTTTCCGGTT 59.922 52.381 0.00 0.00 0.00 4.44
3160 5409 1.907255 CTACTCCCTCCTTTCCGGTTT 59.093 52.381 0.00 0.00 0.00 3.27
3161 5410 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
3162 5411 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
3165 5414 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
3166 5415 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
3167 5416 2.486727 CCTCCTTTCCGGTTTATAGGGC 60.487 54.545 0.00 0.00 0.00 5.19
3168 5417 2.438392 CTCCTTTCCGGTTTATAGGGCT 59.562 50.000 0.00 0.00 0.00 5.19
3169 5418 2.848071 TCCTTTCCGGTTTATAGGGCTT 59.152 45.455 0.00 0.00 0.00 4.35
3170 5419 4.039339 TCCTTTCCGGTTTATAGGGCTTA 58.961 43.478 0.00 0.00 0.00 3.09
3171 5420 4.661709 TCCTTTCCGGTTTATAGGGCTTAT 59.338 41.667 0.00 0.00 0.00 1.73
3172 5421 5.001874 CCTTTCCGGTTTATAGGGCTTATC 58.998 45.833 0.00 0.00 0.00 1.75
3173 5422 5.221864 CCTTTCCGGTTTATAGGGCTTATCT 60.222 44.000 0.00 0.00 0.00 1.98
3174 5423 5.479124 TTCCGGTTTATAGGGCTTATCTC 57.521 43.478 0.00 0.00 0.00 2.75
3175 5424 4.485875 TCCGGTTTATAGGGCTTATCTCA 58.514 43.478 0.00 0.00 0.00 3.27
3176 5425 4.527038 TCCGGTTTATAGGGCTTATCTCAG 59.473 45.833 0.00 0.00 0.00 3.35
3177 5426 4.527038 CCGGTTTATAGGGCTTATCTCAGA 59.473 45.833 0.00 0.00 0.00 3.27
3179 5428 6.295916 CCGGTTTATAGGGCTTATCTCAGAAT 60.296 42.308 0.00 0.00 0.00 2.40
3180 5429 7.162082 CGGTTTATAGGGCTTATCTCAGAATT 58.838 38.462 0.00 0.00 0.00 2.17
3182 5431 9.355916 GGTTTATAGGGCTTATCTCAGAATTTT 57.644 33.333 0.00 0.00 0.00 1.82
3188 5437 8.885693 AGGGCTTATCTCAGAATTTTAGTTTT 57.114 30.769 0.00 0.00 0.00 2.43
3189 5438 9.314133 AGGGCTTATCTCAGAATTTTAGTTTTT 57.686 29.630 0.00 0.00 0.00 1.94
3215 5464 9.434420 TTCATTTTATAAGGCTCAATTTGGTTG 57.566 29.630 0.00 0.00 39.25 3.77
3217 5466 9.218440 CATTTTATAAGGCTCAATTTGGTTGTT 57.782 29.630 0.00 0.00 38.95 2.83
3219 5468 3.751479 AAGGCTCAATTTGGTTGTTCC 57.249 42.857 0.00 0.00 38.95 3.62
3220 5469 1.970640 AGGCTCAATTTGGTTGTTCCC 59.029 47.619 0.00 0.00 38.95 3.97
3221 5470 1.001974 GGCTCAATTTGGTTGTTCCCC 59.998 52.381 0.00 0.00 38.95 4.81
3222 5471 1.336795 GCTCAATTTGGTTGTTCCCCG 60.337 52.381 0.00 0.00 38.95 5.73
3223 5472 1.960689 CTCAATTTGGTTGTTCCCCGT 59.039 47.619 0.00 0.00 38.95 5.28
3224 5473 2.364002 CTCAATTTGGTTGTTCCCCGTT 59.636 45.455 0.00 0.00 38.95 4.44
3225 5474 3.563223 TCAATTTGGTTGTTCCCCGTTA 58.437 40.909 0.00 0.00 38.95 3.18
3226 5475 3.318557 TCAATTTGGTTGTTCCCCGTTAC 59.681 43.478 0.00 0.00 38.95 2.50
3227 5476 2.431954 TTTGGTTGTTCCCCGTTACA 57.568 45.000 0.00 0.00 34.77 2.41
3228 5477 2.660670 TTGGTTGTTCCCCGTTACAT 57.339 45.000 0.00 0.00 34.77 2.29
3229 5478 1.898902 TGGTTGTTCCCCGTTACATG 58.101 50.000 0.00 0.00 34.77 3.21
3230 5479 1.143277 TGGTTGTTCCCCGTTACATGT 59.857 47.619 2.69 2.69 34.77 3.21
3231 5480 2.232399 GGTTGTTCCCCGTTACATGTT 58.768 47.619 2.30 0.00 0.00 2.71
3234 5483 3.210232 TGTTCCCCGTTACATGTTCAA 57.790 42.857 2.30 0.00 0.00 2.69
3235 5484 3.552875 TGTTCCCCGTTACATGTTCAAA 58.447 40.909 2.30 0.00 0.00 2.69
3237 5486 4.585162 TGTTCCCCGTTACATGTTCAAATT 59.415 37.500 2.30 0.00 0.00 1.82
3238 5487 5.069251 TGTTCCCCGTTACATGTTCAAATTT 59.931 36.000 2.30 0.00 0.00 1.82
3239 5488 5.379732 TCCCCGTTACATGTTCAAATTTC 57.620 39.130 2.30 0.00 0.00 2.17
3241 5490 5.302059 TCCCCGTTACATGTTCAAATTTCAA 59.698 36.000 2.30 0.00 0.00 2.69
3243 5492 6.442952 CCCGTTACATGTTCAAATTTCAAGA 58.557 36.000 2.30 0.00 0.00 3.02
3244 5493 7.090173 CCCGTTACATGTTCAAATTTCAAGAT 58.910 34.615 2.30 0.00 0.00 2.40
3246 5495 7.410728 CCGTTACATGTTCAAATTTCAAGATGC 60.411 37.037 11.15 0.00 28.55 3.91
3247 5496 7.114670 CGTTACATGTTCAAATTTCAAGATGCA 59.885 33.333 11.15 0.00 28.55 3.96
3248 5497 8.928733 GTTACATGTTCAAATTTCAAGATGCAT 58.071 29.630 11.15 0.00 28.55 3.96
3249 5498 7.972832 ACATGTTCAAATTTCAAGATGCATT 57.027 28.000 11.15 0.00 28.55 3.56
3251 5500 9.491675 ACATGTTCAAATTTCAAGATGCATTAA 57.508 25.926 11.15 0.00 28.55 1.40
3263 5512 8.806177 TCAAGATGCATTAAATCATTGTATGC 57.194 30.769 0.00 9.14 37.91 3.14
3264 5513 8.414778 TCAAGATGCATTAAATCATTGTATGCA 58.585 29.630 17.42 17.42 44.57 3.96
3265 5514 9.036671 CAAGATGCATTAAATCATTGTATGCAA 57.963 29.630 18.48 0.00 44.12 4.08
3267 5516 8.418662 AGATGCATTAAATCATTGTATGCAAGT 58.581 29.630 18.48 7.79 44.12 3.16
3268 5517 9.681692 GATGCATTAAATCATTGTATGCAAGTA 57.318 29.630 18.48 2.08 44.12 2.24
3367 5616 9.612066 TTTTTGAGGAAAAACAAGAGCATTAAT 57.388 25.926 0.00 0.00 37.48 1.40
3368 5617 9.612066 TTTTGAGGAAAAACAAGAGCATTAATT 57.388 25.926 0.00 0.00 32.72 1.40
3370 5619 9.912634 TTGAGGAAAAACAAGAGCATTAATTAG 57.087 29.630 0.00 0.00 0.00 1.73
3371 5620 8.522830 TGAGGAAAAACAAGAGCATTAATTAGG 58.477 33.333 0.00 0.00 0.00 2.69
3372 5621 8.422577 AGGAAAAACAAGAGCATTAATTAGGT 57.577 30.769 0.00 0.00 0.00 3.08
3373 5622 8.306761 AGGAAAAACAAGAGCATTAATTAGGTG 58.693 33.333 0.00 0.00 0.00 4.00
3374 5623 7.063426 GGAAAAACAAGAGCATTAATTAGGTGC 59.937 37.037 13.92 13.92 39.10 5.01
3413 5662 7.781324 AAAAATATTCCAACACTCACCATCT 57.219 32.000 0.00 0.00 0.00 2.90
3414 5663 8.877864 AAAAATATTCCAACACTCACCATCTA 57.122 30.769 0.00 0.00 0.00 1.98
3415 5664 9.479549 AAAAATATTCCAACACTCACCATCTAT 57.520 29.630 0.00 0.00 0.00 1.98
3416 5665 8.682936 AAATATTCCAACACTCACCATCTATC 57.317 34.615 0.00 0.00 0.00 2.08
3417 5666 5.965033 ATTCCAACACTCACCATCTATCT 57.035 39.130 0.00 0.00 0.00 1.98
3418 5667 5.762179 TTCCAACACTCACCATCTATCTT 57.238 39.130 0.00 0.00 0.00 2.40
3419 5668 5.089970 TCCAACACTCACCATCTATCTTG 57.910 43.478 0.00 0.00 0.00 3.02
3420 5669 4.080919 TCCAACACTCACCATCTATCTTGG 60.081 45.833 0.00 0.00 40.26 3.61
3422 5671 5.248640 CAACACTCACCATCTATCTTGGTT 58.751 41.667 0.00 0.00 45.19 3.67
3423 5672 4.836825 ACACTCACCATCTATCTTGGTTG 58.163 43.478 0.00 0.00 45.19 3.77
3424 5673 4.194640 CACTCACCATCTATCTTGGTTGG 58.805 47.826 0.00 0.00 45.19 3.77
3425 5674 3.846588 ACTCACCATCTATCTTGGTTGGT 59.153 43.478 0.00 0.00 45.19 3.67
3428 5677 4.494091 ACCATCTATCTTGGTTGGTGAG 57.506 45.455 0.00 0.00 45.19 3.51
3429 5678 4.104086 ACCATCTATCTTGGTTGGTGAGA 58.896 43.478 0.00 0.00 45.19 3.27
3430 5679 4.723789 ACCATCTATCTTGGTTGGTGAGAT 59.276 41.667 0.00 0.00 45.19 2.75
3431 5680 5.192522 ACCATCTATCTTGGTTGGTGAGATT 59.807 40.000 0.00 0.00 45.19 2.40
3432 5681 6.125029 CCATCTATCTTGGTTGGTGAGATTT 58.875 40.000 0.00 0.00 32.68 2.17
3433 5682 6.604795 CCATCTATCTTGGTTGGTGAGATTTT 59.395 38.462 0.00 0.00 32.68 1.82
3434 5683 7.123247 CCATCTATCTTGGTTGGTGAGATTTTT 59.877 37.037 0.00 0.00 32.68 1.94
3435 5684 7.452880 TCTATCTTGGTTGGTGAGATTTTTG 57.547 36.000 0.00 0.00 32.68 2.44
3436 5685 7.230747 TCTATCTTGGTTGGTGAGATTTTTGA 58.769 34.615 0.00 0.00 32.68 2.69
3437 5686 6.729690 ATCTTGGTTGGTGAGATTTTTGAA 57.270 33.333 0.00 0.00 0.00 2.69
3438 5687 6.729690 TCTTGGTTGGTGAGATTTTTGAAT 57.270 33.333 0.00 0.00 0.00 2.57
3439 5688 7.123355 TCTTGGTTGGTGAGATTTTTGAATT 57.877 32.000 0.00 0.00 0.00 2.17
3440 5689 6.985645 TCTTGGTTGGTGAGATTTTTGAATTG 59.014 34.615 0.00 0.00 0.00 2.32
3441 5690 6.477053 TGGTTGGTGAGATTTTTGAATTGA 57.523 33.333 0.00 0.00 0.00 2.57
3442 5691 6.514947 TGGTTGGTGAGATTTTTGAATTGAG 58.485 36.000 0.00 0.00 0.00 3.02
3443 5692 5.406477 GGTTGGTGAGATTTTTGAATTGAGC 59.594 40.000 0.00 0.00 0.00 4.26
3444 5693 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
3445 5694 4.021192 TGGTGAGATTTTTGAATTGAGCCC 60.021 41.667 0.00 0.00 0.00 5.19
3446 5695 4.221482 GGTGAGATTTTTGAATTGAGCCCT 59.779 41.667 0.00 0.00 0.00 5.19
3447 5696 5.418840 GGTGAGATTTTTGAATTGAGCCCTA 59.581 40.000 0.00 0.00 0.00 3.53
3448 5697 6.097412 GGTGAGATTTTTGAATTGAGCCCTAT 59.903 38.462 0.00 0.00 0.00 2.57
3449 5698 7.285401 GGTGAGATTTTTGAATTGAGCCCTATA 59.715 37.037 0.00 0.00 0.00 1.31
3450 5699 8.686334 GTGAGATTTTTGAATTGAGCCCTATAA 58.314 33.333 0.00 0.00 0.00 0.98
3451 5700 9.253832 TGAGATTTTTGAATTGAGCCCTATAAA 57.746 29.630 0.00 0.00 0.00 1.40
3452 5701 9.521503 GAGATTTTTGAATTGAGCCCTATAAAC 57.478 33.333 0.00 0.00 0.00 2.01
3453 5702 8.478066 AGATTTTTGAATTGAGCCCTATAAACC 58.522 33.333 0.00 0.00 0.00 3.27
3454 5703 7.546250 TTTTTGAATTGAGCCCTATAAACCA 57.454 32.000 0.00 0.00 0.00 3.67
3455 5704 6.773976 TTTGAATTGAGCCCTATAAACCAG 57.226 37.500 0.00 0.00 0.00 4.00
3456 5705 5.708736 TGAATTGAGCCCTATAAACCAGA 57.291 39.130 0.00 0.00 0.00 3.86
3457 5706 6.073447 TGAATTGAGCCCTATAAACCAGAA 57.927 37.500 0.00 0.00 0.00 3.02
3458 5707 6.489603 TGAATTGAGCCCTATAAACCAGAAA 58.510 36.000 0.00 0.00 0.00 2.52
3459 5708 6.603201 TGAATTGAGCCCTATAAACCAGAAAG 59.397 38.462 0.00 0.00 0.00 2.62
3460 5709 4.503714 TGAGCCCTATAAACCAGAAAGG 57.496 45.455 0.00 0.00 45.67 3.11
3461 5710 4.108570 TGAGCCCTATAAACCAGAAAGGA 58.891 43.478 0.00 0.00 41.22 3.36
3462 5711 4.164221 TGAGCCCTATAAACCAGAAAGGAG 59.836 45.833 0.00 0.00 41.22 3.69
3463 5712 3.459969 AGCCCTATAAACCAGAAAGGAGG 59.540 47.826 0.00 0.00 41.22 4.30
3464 5713 3.435169 GCCCTATAAACCAGAAAGGAGGG 60.435 52.174 0.00 0.00 45.37 4.30
3465 5714 4.045022 CCCTATAAACCAGAAAGGAGGGA 58.955 47.826 0.00 0.00 45.41 4.20
3466 5715 4.103311 CCCTATAAACCAGAAAGGAGGGAG 59.897 50.000 0.00 0.00 45.41 4.30
3479 5728 6.837568 AGAAAGGAGGGAGTATCGTAATGTAA 59.162 38.462 0.00 0.00 34.37 2.41
3504 5756 5.350365 TGATAACGCCAATCAAACTAGTGAC 59.650 40.000 0.00 0.00 30.52 3.67
3690 5953 1.337071 TGATAGAGTAAGGCGGCTTCG 59.663 52.381 29.05 0.00 0.00 3.79
3857 6120 1.593426 CGAGTCTCGTGAAGTCGAAC 58.407 55.000 14.27 0.00 39.34 3.95
4042 6348 7.542890 ACTCTGTCATCTTGTATACAACTGAG 58.457 38.462 24.99 24.99 35.57 3.35
4114 6424 1.463444 GTTCCGAGGTTCAATGTTCCG 59.537 52.381 0.00 0.00 0.00 4.30
4142 6456 6.394809 TGAGATCGAGCAACTTGTGTTATTA 58.605 36.000 2.38 0.00 34.60 0.98
4143 6457 6.310467 TGAGATCGAGCAACTTGTGTTATTAC 59.690 38.462 2.38 0.00 34.60 1.89
4178 6492 6.058183 TCCTGGATCATTTTCTTTAGCTAGC 58.942 40.000 6.62 6.62 0.00 3.42
4183 6497 6.146347 GGATCATTTTCTTTAGCTAGCGGTAG 59.854 42.308 17.24 17.24 0.00 3.18
4197 6511 1.429463 CGGTAGTGGTTGAGTTGCTC 58.571 55.000 0.00 0.00 0.00 4.26
4217 6531 7.325660 TGCTCTAATCTGAATGAATTGAACC 57.674 36.000 0.00 0.00 0.00 3.62
4536 6850 6.350696 GGGTTTTGTTATGTTAGGGCTTAAGG 60.351 42.308 4.29 0.00 0.00 2.69
4595 6909 3.106672 ACGCACGATCGATAAGTCTTTC 58.893 45.455 24.34 0.00 0.00 2.62
4596 6910 3.181499 ACGCACGATCGATAAGTCTTTCT 60.181 43.478 24.34 0.00 0.00 2.52
4597 6911 3.791887 CGCACGATCGATAAGTCTTTCTT 59.208 43.478 24.34 0.00 39.89 2.52
4598 6912 4.265556 CGCACGATCGATAAGTCTTTCTTT 59.734 41.667 24.34 0.00 37.56 2.52
4650 6967 0.251033 GGAAAAGGCGTAGTGGGGTT 60.251 55.000 0.00 0.00 0.00 4.11
4668 6985 2.600470 GTGTGGGGTTTGGAGGCC 60.600 66.667 0.00 0.00 0.00 5.19
4750 7077 2.293170 GCTCATTTGGTCTTCTAGGGC 58.707 52.381 0.00 0.00 0.00 5.19
4754 7081 1.485294 TTTGGTCTTCTAGGGCCGCA 61.485 55.000 0.00 0.00 0.00 5.69
4769 7096 1.126296 GCCGCACGTTCTCTTCTTAAC 59.874 52.381 0.00 0.00 0.00 2.01
4826 7156 2.609299 TCCAGGCGGGACATCCAA 60.609 61.111 0.91 0.00 42.15 3.53
4832 7162 1.072331 AGGCGGGACATCCAATATGAC 59.928 52.381 0.00 0.00 37.91 3.06
4860 7190 0.994995 CATGCGTCATATAGGAGCGC 59.005 55.000 19.93 19.93 47.00 5.92
4861 7191 4.966005 GCGTCATATAGGAGCGCA 57.034 55.556 21.05 0.00 46.23 6.09
4863 7193 1.714794 GCGTCATATAGGAGCGCAAT 58.285 50.000 21.05 0.00 46.23 3.56
4897 7227 3.249189 TGACCAGCCTGACCCACC 61.249 66.667 0.00 0.00 0.00 4.61
4941 7271 0.376152 TTAACACGTGGCGCGAAAAA 59.624 45.000 28.85 12.22 44.77 1.94
5019 7349 5.387342 CCGTCGAGAATTGATTTTGTTTTGC 60.387 40.000 0.00 0.00 0.00 3.68
5097 7429 9.552114 CAAAACACAAACATATTTTTGAAAGCA 57.448 25.926 18.78 0.00 38.76 3.91
5159 7493 2.147958 TGGGATCCAAACGAGAAAACG 58.852 47.619 15.23 0.00 39.31 3.60
5160 7494 2.224329 TGGGATCCAAACGAGAAAACGA 60.224 45.455 15.23 0.00 37.03 3.85
5167 7501 6.847956 TCCAAACGAGAAAACGAGATTTTA 57.152 33.333 0.00 0.00 40.73 1.52
5168 7502 7.249186 TCCAAACGAGAAAACGAGATTTTAA 57.751 32.000 0.00 0.00 40.73 1.52
5169 7503 7.695820 TCCAAACGAGAAAACGAGATTTTAAA 58.304 30.769 0.00 0.00 40.73 1.52
5170 7504 8.182881 TCCAAACGAGAAAACGAGATTTTAAAA 58.817 29.630 2.51 2.51 40.73 1.52
5270 7604 6.626199 AAGACGTGAACAACAATTTGAAAC 57.374 33.333 2.79 0.00 36.48 2.78
5274 7608 5.290643 ACGTGAACAACAATTTGAAACATGG 59.709 36.000 2.79 0.00 36.48 3.66
5277 7611 7.179410 GTGAACAACAATTTGAAACATGGAAC 58.821 34.615 2.79 0.00 36.48 3.62
5349 7685 8.750515 AACTTTTGAATTGATGGAAACCAAAT 57.249 26.923 0.00 0.00 36.95 2.32
5356 7692 9.487790 TGAATTGATGGAAACCAAATAAGAAAC 57.512 29.630 0.00 0.00 36.95 2.78
5358 7694 9.492973 AATTGATGGAAACCAAATAAGAAACAG 57.507 29.630 0.00 0.00 36.95 3.16
5359 7695 7.831691 TGATGGAAACCAAATAAGAAACAGA 57.168 32.000 0.00 0.00 36.95 3.41
5436 7773 1.082117 CCCCGCACGTATGACAAGTC 61.082 60.000 0.00 0.00 0.00 3.01
5438 7775 0.455464 CCGCACGTATGACAAGTCGA 60.455 55.000 0.00 0.00 0.00 4.20
5439 7776 0.633733 CGCACGTATGACAAGTCGAC 59.366 55.000 7.70 7.70 0.00 4.20
5467 7804 0.464036 TCCGTCGCCTCTATGCATTT 59.536 50.000 3.54 0.00 0.00 2.32
5472 7809 1.102809 CGCCTCTATGCATTTGGCCA 61.103 55.000 22.78 0.00 43.89 5.36
5487 7824 1.271163 TGGCCAACTACTACTTGCCAC 60.271 52.381 0.61 0.00 0.00 5.01
5488 7825 1.271163 GGCCAACTACTACTTGCCACA 60.271 52.381 0.00 0.00 0.00 4.17
5490 7827 3.081804 GCCAACTACTACTTGCCACAAT 58.918 45.455 0.00 0.00 0.00 2.71
5495 7832 2.566833 ACTACTTGCCACAATGAGCA 57.433 45.000 0.00 0.00 37.18 4.26
5496 7833 3.077484 ACTACTTGCCACAATGAGCAT 57.923 42.857 3.86 0.00 39.11 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.910688 ACAGGAACAGTGTGTAGTGG 57.089 50.000 0.00 0.00 0.00 4.00
7 8 5.583457 GTGTTAAACAGGAACAGTGTGTAGT 59.417 40.000 0.00 0.00 37.47 2.73
8 9 5.815740 AGTGTTAAACAGGAACAGTGTGTAG 59.184 40.000 0.00 0.00 38.68 2.74
9 10 5.736813 AGTGTTAAACAGGAACAGTGTGTA 58.263 37.500 0.00 0.00 38.68 2.90
10 11 4.585879 AGTGTTAAACAGGAACAGTGTGT 58.414 39.130 0.00 0.00 38.68 3.72
11 12 5.331902 CAAGTGTTAAACAGGAACAGTGTG 58.668 41.667 0.00 0.00 39.75 3.82
33 35 1.286553 AGGTTCACAAAAGGGACACCA 59.713 47.619 0.00 0.00 40.13 4.17
74 76 3.398406 TGAAGAAACGTAGCATGCTGAA 58.602 40.909 30.42 8.48 0.00 3.02
139 141 8.827177 ACTTCTACATCGAGTTTATTGTTTCA 57.173 30.769 0.00 0.00 0.00 2.69
145 147 9.448294 GACGAATACTTCTACATCGAGTTTATT 57.552 33.333 0.07 0.00 37.27 1.40
302 304 1.227089 CTCTTGGATCTGGTCGCCG 60.227 63.158 0.00 0.00 0.00 6.46
450 452 2.188062 TTCGGAGCCCACGTATTTTT 57.812 45.000 0.00 0.00 0.00 1.94
463 465 3.055385 TCCCACCAAAACTCTATTCGGAG 60.055 47.826 0.00 0.00 39.09 4.63
466 468 3.670625 TGTCCCACCAAAACTCTATTCG 58.329 45.455 0.00 0.00 0.00 3.34
495 498 1.609210 TCTGCCATGTCGGACTCCA 60.609 57.895 9.88 0.83 36.56 3.86
511 776 0.626382 TCTGAGGAGTCCGGATGTCT 59.374 55.000 7.81 5.14 0.00 3.41
558 824 2.169352 CTGGTCTGGATGTCGAAATCCT 59.831 50.000 30.41 0.00 45.57 3.24
561 832 3.007940 TGAACTGGTCTGGATGTCGAAAT 59.992 43.478 0.00 0.00 0.00 2.17
566 837 2.354203 GGTCTGAACTGGTCTGGATGTC 60.354 54.545 0.00 0.00 0.00 3.06
571 842 0.898320 ATCGGTCTGAACTGGTCTGG 59.102 55.000 0.00 0.00 32.22 3.86
572 843 2.738846 CAAATCGGTCTGAACTGGTCTG 59.261 50.000 0.00 0.00 32.22 3.51
583 2616 4.744795 AAGTAGATCAGCAAATCGGTCT 57.255 40.909 0.00 0.00 0.00 3.85
600 2633 2.752354 CCCGCAAATGTCATCCAAAGTA 59.248 45.455 0.00 0.00 0.00 2.24
603 2636 1.271934 CACCCGCAAATGTCATCCAAA 59.728 47.619 0.00 0.00 0.00 3.28
606 2639 0.887933 AACACCCGCAAATGTCATCC 59.112 50.000 0.00 0.00 0.00 3.51
629 2691 1.662026 GGCATTTCCAACGTGAACGAC 60.662 52.381 10.26 0.00 37.54 4.34
697 2759 5.835113 TGTCTGGCAAGAAATTATTAGGC 57.165 39.130 0.00 0.00 33.05 3.93
800 2865 9.072072 TTGGAACATTTAACAGTGGCAGTACTG 62.072 40.741 18.93 18.93 46.10 2.74
819 2884 1.608109 TGCTCGTACTACGTTGGAACA 59.392 47.619 8.42 0.00 43.14 3.18
838 2903 2.025155 AGTAGAGCGATACCACCACTG 58.975 52.381 0.00 0.00 0.00 3.66
1062 3127 0.532573 CGAGCTTACCTGAGCCAGAA 59.467 55.000 4.00 0.00 43.74 3.02
1095 3167 0.875059 CCGGAGAACCAAAACAGCTC 59.125 55.000 0.00 0.00 35.59 4.09
1105 3177 0.686769 TAAGAGGGAGCCGGAGAACC 60.687 60.000 5.05 0.19 0.00 3.62
1106 3178 0.460722 GTAAGAGGGAGCCGGAGAAC 59.539 60.000 5.05 0.00 0.00 3.01
1114 3186 2.079925 CTTGCAGTTGTAAGAGGGAGC 58.920 52.381 4.20 0.00 39.64 4.70
1122 3194 3.807622 CGGAGAAGAACTTGCAGTTGTAA 59.192 43.478 6.31 0.00 38.80 2.41
1150 3249 4.883585 TGTTCACTGACAAGATTTGAAGCT 59.116 37.500 0.00 0.00 0.00 3.74
1175 3274 1.353103 GCATGCGCGTAGAAATGCT 59.647 52.632 17.87 0.00 41.71 3.79
1213 3312 1.243342 TGCTGTGCATTTCTTCCCGG 61.243 55.000 0.00 0.00 31.71 5.73
1250 3349 6.147437 ACTTAAAGAGAGAGGGAGAGAGAA 57.853 41.667 0.00 0.00 0.00 2.87
1258 3357 4.394300 CACATGCAACTTAAAGAGAGAGGG 59.606 45.833 0.00 0.00 0.00 4.30
1259 3358 5.240891 TCACATGCAACTTAAAGAGAGAGG 58.759 41.667 0.00 0.00 0.00 3.69
1261 3360 7.229306 ACATTTCACATGCAACTTAAAGAGAGA 59.771 33.333 0.00 0.00 0.00 3.10
1262 3361 7.365741 ACATTTCACATGCAACTTAAAGAGAG 58.634 34.615 0.00 0.00 0.00 3.20
1265 3364 7.978414 TCAAACATTTCACATGCAACTTAAAGA 59.022 29.630 0.00 0.00 0.00 2.52
1267 3366 7.763528 ACTCAAACATTTCACATGCAACTTAAA 59.236 29.630 0.00 0.00 0.00 1.52
1269 3368 6.804677 ACTCAAACATTTCACATGCAACTTA 58.195 32.000 0.00 0.00 0.00 2.24
1270 3369 5.663456 ACTCAAACATTTCACATGCAACTT 58.337 33.333 0.00 0.00 0.00 2.66
1272 3371 5.971895 AACTCAAACATTTCACATGCAAC 57.028 34.783 0.00 0.00 0.00 4.17
1273 3372 5.873712 ACAAACTCAAACATTTCACATGCAA 59.126 32.000 0.00 0.00 0.00 4.08
1281 3380 8.592155 GGTTACTTGAACAAACTCAAACATTTC 58.408 33.333 0.00 0.00 40.09 2.17
1389 3493 0.665835 GCCACCGTTGTTGTTGATGA 59.334 50.000 0.00 0.00 0.00 2.92
1390 3494 0.660005 CGCCACCGTTGTTGTTGATG 60.660 55.000 0.00 0.00 0.00 3.07
1395 3499 3.700831 TTCCCGCCACCGTTGTTGT 62.701 57.895 0.00 0.00 0.00 3.32
1481 3585 0.033991 TCCTCCTCGTCCTCTTCCAG 60.034 60.000 0.00 0.00 0.00 3.86
1612 3716 1.234821 CAAGTTAAGTGAAGGCGGCA 58.765 50.000 13.08 0.00 0.00 5.69
1613 3717 0.109735 GCAAGTTAAGTGAAGGCGGC 60.110 55.000 0.00 0.00 0.00 6.53
1615 3719 4.451096 TCTTAAGCAAGTTAAGTGAAGGCG 59.549 41.667 0.00 0.00 45.58 5.52
1616 3720 5.941948 TCTTAAGCAAGTTAAGTGAAGGC 57.058 39.130 0.00 0.00 45.58 4.35
1617 3721 6.183360 CCGATCTTAAGCAAGTTAAGTGAAGG 60.183 42.308 0.00 2.39 45.58 3.46
1618 3722 6.673316 GCCGATCTTAAGCAAGTTAAGTGAAG 60.673 42.308 0.00 0.00 45.58 3.02
1619 3723 5.121768 GCCGATCTTAAGCAAGTTAAGTGAA 59.878 40.000 0.00 0.00 45.58 3.18
1621 3725 4.391830 TGCCGATCTTAAGCAAGTTAAGTG 59.608 41.667 0.00 0.00 45.58 3.16
1622 3726 4.575885 TGCCGATCTTAAGCAAGTTAAGT 58.424 39.130 0.00 0.00 45.58 2.24
1624 3728 4.941263 ACATGCCGATCTTAAGCAAGTTAA 59.059 37.500 0.00 0.00 40.46 2.01
1625 3729 4.513442 ACATGCCGATCTTAAGCAAGTTA 58.487 39.130 0.00 0.00 40.46 2.24
1626 3730 3.347216 ACATGCCGATCTTAAGCAAGTT 58.653 40.909 0.00 0.00 40.46 2.66
1627 3731 2.939103 GACATGCCGATCTTAAGCAAGT 59.061 45.455 0.00 0.00 40.76 3.16
1628 3732 2.289002 GGACATGCCGATCTTAAGCAAG 59.711 50.000 0.00 0.00 40.46 4.01
1629 3733 2.288666 GGACATGCCGATCTTAAGCAA 58.711 47.619 0.00 0.00 40.46 3.91
1651 3755 0.975887 ACATGCCGGCCAATCTTTTT 59.024 45.000 26.77 0.00 0.00 1.94
1652 3756 1.750778 CTACATGCCGGCCAATCTTTT 59.249 47.619 26.77 1.60 0.00 2.27
1653 3757 1.340991 ACTACATGCCGGCCAATCTTT 60.341 47.619 26.77 3.35 0.00 2.52
1659 3783 1.219664 GTGTACTACATGCCGGCCA 59.780 57.895 26.77 12.96 0.00 5.36
1682 3811 9.381027 TGCACGTACGTGTATAACTATTATTAC 57.619 33.333 39.56 22.17 46.90 1.89
1686 3815 6.183360 TGGTGCACGTACGTGTATAACTATTA 60.183 38.462 39.56 18.88 46.90 0.98
1687 3816 5.036737 GGTGCACGTACGTGTATAACTATT 58.963 41.667 39.56 5.54 46.90 1.73
1689 3818 3.438434 TGGTGCACGTACGTGTATAACTA 59.562 43.478 39.56 28.38 46.90 2.24
1690 3819 2.228582 TGGTGCACGTACGTGTATAACT 59.771 45.455 39.56 7.59 46.90 2.24
1691 3820 2.594321 TGGTGCACGTACGTGTATAAC 58.406 47.619 39.56 31.06 46.90 1.89
1692 3821 2.487372 TCTGGTGCACGTACGTGTATAA 59.513 45.455 39.56 28.15 46.90 0.98
1695 3824 0.667453 TTCTGGTGCACGTACGTGTA 59.333 50.000 39.56 35.62 46.90 2.90
1696 3825 0.179105 TTTCTGGTGCACGTACGTGT 60.179 50.000 39.56 11.43 46.90 4.49
1706 3855 1.079503 GTGGACGAGATTTCTGGTGC 58.920 55.000 7.18 7.18 41.85 5.01
1754 3903 0.821517 ATTCATCCGTACGACCAGCA 59.178 50.000 18.76 0.00 0.00 4.41
1756 3905 3.116300 CAAGATTCATCCGTACGACCAG 58.884 50.000 18.76 0.00 0.00 4.00
1812 3961 3.424962 GGTTACTTCGTGCTCTTCAATGC 60.425 47.826 0.00 0.00 0.00 3.56
1845 3995 0.896479 TGGATCAGTGGTCGTCCGAA 60.896 55.000 0.00 0.00 36.30 4.30
1852 4002 5.023533 TGCTACTTAATGGATCAGTGGTC 57.976 43.478 0.00 0.00 0.00 4.02
1873 4023 3.451526 TCAAAGATCGAGCAGTGCTATG 58.548 45.455 19.77 14.06 39.88 2.23
1874 4024 3.808466 TCAAAGATCGAGCAGTGCTAT 57.192 42.857 19.77 9.12 39.88 2.97
1875 4025 3.808466 ATCAAAGATCGAGCAGTGCTA 57.192 42.857 19.77 3.27 39.88 3.49
1876 4026 2.687700 ATCAAAGATCGAGCAGTGCT 57.312 45.000 19.86 19.86 43.88 4.40
1877 4027 6.718454 ATATAATCAAAGATCGAGCAGTGC 57.282 37.500 7.13 7.13 0.00 4.40
1906 4056 2.423538 CCTTGATTTCCCATGAACGGAC 59.576 50.000 0.00 0.00 0.00 4.79
1907 4057 2.722094 CCTTGATTTCCCATGAACGGA 58.278 47.619 0.00 0.00 0.00 4.69
1910 4060 3.959535 TTGCCTTGATTTCCCATGAAC 57.040 42.857 0.00 0.00 0.00 3.18
1927 4077 6.531439 CCACTAACGAGTAGTAATGTTTTGC 58.469 40.000 0.00 0.00 41.37 3.68
1931 4081 5.047519 ACTGCCACTAACGAGTAGTAATGTT 60.048 40.000 0.00 0.00 41.37 2.71
1940 4104 1.467734 CGAGTACTGCCACTAACGAGT 59.532 52.381 0.00 0.00 35.80 4.18
1941 4105 1.202154 CCGAGTACTGCCACTAACGAG 60.202 57.143 0.00 0.00 0.00 4.18
1943 4107 0.524862 ACCGAGTACTGCCACTAACG 59.475 55.000 0.00 0.00 0.00 3.18
1944 4108 2.751806 ACTACCGAGTACTGCCACTAAC 59.248 50.000 0.00 0.00 32.65 2.34
1954 4118 7.793927 AAGGTAATGTACTACTACCGAGTAC 57.206 40.000 6.09 6.09 46.32 2.73
1977 4154 3.940221 ACTACAAAGTTGTGCACCGTTAA 59.060 39.130 15.69 0.00 42.31 2.01
1978 4155 3.533547 ACTACAAAGTTGTGCACCGTTA 58.466 40.909 15.69 0.00 42.31 3.18
1994 4171 8.215736 TCTCCATGCTACTAGTACAATACTACA 58.784 37.037 0.00 0.00 40.14 2.74
1995 4172 8.618702 TCTCCATGCTACTAGTACAATACTAC 57.381 38.462 0.00 0.00 40.14 2.73
1996 4173 8.657712 TCTCTCCATGCTACTAGTACAATACTA 58.342 37.037 0.00 0.00 40.14 1.82
1997 4174 7.519057 TCTCTCCATGCTACTAGTACAATACT 58.481 38.462 0.00 0.00 42.68 2.12
1998 4175 7.747155 TCTCTCCATGCTACTAGTACAATAC 57.253 40.000 0.00 0.00 0.00 1.89
1999 4176 8.387039 AGATCTCTCCATGCTACTAGTACAATA 58.613 37.037 0.00 0.00 0.00 1.90
2000 4177 7.237982 AGATCTCTCCATGCTACTAGTACAAT 58.762 38.462 0.00 0.00 0.00 2.71
2001 4178 6.606069 AGATCTCTCCATGCTACTAGTACAA 58.394 40.000 0.00 0.00 0.00 2.41
2002 4179 6.194285 AGATCTCTCCATGCTACTAGTACA 57.806 41.667 0.00 3.27 0.00 2.90
2006 4183 7.620880 ACTACTAGATCTCTCCATGCTACTAG 58.379 42.308 0.00 0.00 34.30 2.57
2010 4187 6.411376 GCTACTACTAGATCTCTCCATGCTA 58.589 44.000 0.00 0.00 0.00 3.49
2034 4220 1.102978 CGCCCCCACTCTTTATTTGG 58.897 55.000 0.00 0.00 0.00 3.28
2095 4281 1.543358 TGTGCTCTACAGTCTCTGCTG 59.457 52.381 0.00 0.00 41.92 4.41
2141 4331 3.250744 CTGTACCACGACGACATGAATT 58.749 45.455 0.00 0.00 0.00 2.17
2175 4365 5.977635 TGTGACTGGATAGGTTCATTACTG 58.022 41.667 0.00 0.00 0.00 2.74
2191 4381 2.046507 GGGAGGCAGCTGTGACTG 60.047 66.667 16.64 0.00 44.82 3.51
2229 4419 0.322648 ACTGCTGCTGCTGTATGTGA 59.677 50.000 23.22 0.00 46.92 3.58
2242 4435 6.704493 TCAAACAAAACCTACTACTACTGCTG 59.296 38.462 0.00 0.00 0.00 4.41
2245 4438 9.408069 CTAGTCAAACAAAACCTACTACTACTG 57.592 37.037 0.00 0.00 0.00 2.74
2247 4440 7.061557 CGCTAGTCAAACAAAACCTACTACTAC 59.938 40.741 0.00 0.00 0.00 2.73
2248 4441 7.086376 CGCTAGTCAAACAAAACCTACTACTA 58.914 38.462 0.00 0.00 0.00 1.82
2249 4442 5.924825 CGCTAGTCAAACAAAACCTACTACT 59.075 40.000 0.00 0.00 0.00 2.57
2253 4446 4.060205 TCCGCTAGTCAAACAAAACCTAC 58.940 43.478 0.00 0.00 0.00 3.18
2275 4468 9.538508 GGGTGAATAAATATGAGTAACGTTACT 57.461 33.333 34.88 34.88 46.11 2.24
2276 4469 8.482429 CGGGTGAATAAATATGAGTAACGTTAC 58.518 37.037 27.23 27.23 0.00 2.50
2278 4471 7.043565 ACGGGTGAATAAATATGAGTAACGTT 58.956 34.615 5.88 5.88 0.00 3.99
2279 4472 6.576185 ACGGGTGAATAAATATGAGTAACGT 58.424 36.000 0.00 0.00 0.00 3.99
2280 4473 6.921857 AGACGGGTGAATAAATATGAGTAACG 59.078 38.462 0.00 0.00 0.00 3.18
2281 4474 8.658499 AAGACGGGTGAATAAATATGAGTAAC 57.342 34.615 0.00 0.00 0.00 2.50
2282 4475 9.976511 CTAAGACGGGTGAATAAATATGAGTAA 57.023 33.333 0.00 0.00 0.00 2.24
2284 4477 6.929606 GCTAAGACGGGTGAATAAATATGAGT 59.070 38.462 0.00 0.00 0.00 3.41
2285 4478 7.155328 AGCTAAGACGGGTGAATAAATATGAG 58.845 38.462 0.00 0.00 0.00 2.90
2286 4479 7.062749 AGCTAAGACGGGTGAATAAATATGA 57.937 36.000 0.00 0.00 0.00 2.15
2300 4507 2.460918 CGTCCATGTTAGCTAAGACGG 58.539 52.381 26.27 19.68 42.39 4.79
2302 4509 3.119245 TCACCGTCCATGTTAGCTAAGAC 60.119 47.826 6.38 9.70 0.00 3.01
2307 4514 1.066143 CCTTCACCGTCCATGTTAGCT 60.066 52.381 0.00 0.00 0.00 3.32
2309 4516 1.369625 GCCTTCACCGTCCATGTTAG 58.630 55.000 0.00 0.00 0.00 2.34
2310 4517 0.035820 GGCCTTCACCGTCCATGTTA 60.036 55.000 0.00 0.00 0.00 2.41
2375 4588 4.080807 TGCATGCAAGAATTCCATTTCCAT 60.081 37.500 20.30 0.00 0.00 3.41
2524 4739 2.719426 AAGAGGTACGTACACTGTGC 57.281 50.000 26.02 8.52 0.00 4.57
2531 4746 7.164826 CGTGAACATGTATAAAGAGGTACGTAC 59.835 40.741 17.56 17.56 0.00 3.67
2532 4747 7.065683 TCGTGAACATGTATAAAGAGGTACGTA 59.934 37.037 0.00 0.00 0.00 3.57
2533 4748 6.032094 CGTGAACATGTATAAAGAGGTACGT 58.968 40.000 0.00 0.00 0.00 3.57
2534 4749 6.260377 TCGTGAACATGTATAAAGAGGTACG 58.740 40.000 0.00 0.00 0.00 3.67
2592 4807 1.280998 CCCTTAACGGTGAGGTTCCAT 59.719 52.381 10.81 0.00 0.00 3.41
2599 4814 2.094338 GTGGTAGTCCCTTAACGGTGAG 60.094 54.545 0.00 0.00 0.00 3.51
2758 4981 1.069500 ACTAACGAACCAATTGCACGC 60.069 47.619 13.85 0.00 0.00 5.34
2832 5056 5.008316 ACCTTTCAACGGAAATGAGTAACAC 59.992 40.000 0.00 0.00 41.89 3.32
2933 5162 6.898171 AGTGGGCTGATGTTCCATATATAT 57.102 37.500 0.00 0.00 32.71 0.86
2955 5184 7.075121 TGAAGTTGCAACGTTACATCAATTAG 58.925 34.615 23.21 0.00 0.00 1.73
2963 5192 4.788201 GCTCAATGAAGTTGCAACGTTACA 60.788 41.667 23.21 19.86 37.74 2.41
2995 5240 1.904144 CGTACCATGGACGTGTAGTG 58.096 55.000 21.47 0.00 35.58 2.74
2996 5241 0.171903 GCGTACCATGGACGTGTAGT 59.828 55.000 26.56 5.71 42.31 2.73
2997 5242 0.171679 TGCGTACCATGGACGTGTAG 59.828 55.000 26.56 11.21 42.31 2.74
2998 5243 0.109179 GTGCGTACCATGGACGTGTA 60.109 55.000 26.56 16.34 42.31 2.90
2999 5244 1.373748 GTGCGTACCATGGACGTGT 60.374 57.895 26.56 7.62 42.31 4.49
3044 5289 3.535629 TAGCACGCACAGCCAAGCT 62.536 57.895 0.00 0.00 40.77 3.74
3057 5302 1.137513 ACGCGAGTTCAAAGTAGCAC 58.862 50.000 15.93 0.00 46.40 4.40
3088 5337 2.954753 GCGGACCACAAACAGCTCG 61.955 63.158 0.00 0.00 0.00 5.03
3092 5341 2.184167 AACGGCGGACCACAAACAG 61.184 57.895 13.24 0.00 34.57 3.16
3098 5347 0.600782 TCTTAACAACGGCGGACCAC 60.601 55.000 13.24 0.00 34.57 4.16
3101 5350 1.869132 AGTTTCTTAACAACGGCGGAC 59.131 47.619 13.24 0.00 36.70 4.79
3119 5368 9.810545 GAGTAGAAACTAATCTCTATGCAAAGT 57.189 33.333 0.00 0.00 35.56 2.66
3120 5369 9.255304 GGAGTAGAAACTAATCTCTATGCAAAG 57.745 37.037 0.00 0.00 35.56 2.77
3121 5370 8.204836 GGGAGTAGAAACTAATCTCTATGCAAA 58.795 37.037 0.00 0.00 35.56 3.68
3122 5371 7.565398 AGGGAGTAGAAACTAATCTCTATGCAA 59.435 37.037 6.81 0.00 35.56 4.08
3123 5372 7.069986 AGGGAGTAGAAACTAATCTCTATGCA 58.930 38.462 6.81 0.00 35.56 3.96
3124 5373 7.309560 GGAGGGAGTAGAAACTAATCTCTATGC 60.310 44.444 8.29 0.00 35.56 3.14
3125 5374 7.947890 AGGAGGGAGTAGAAACTAATCTCTATG 59.052 40.741 8.29 0.00 35.56 2.23
3127 5376 7.468752 AGGAGGGAGTAGAAACTAATCTCTA 57.531 40.000 8.29 0.00 35.56 2.43
3128 5377 6.349897 AGGAGGGAGTAGAAACTAATCTCT 57.650 41.667 8.09 8.09 35.56 3.10
3129 5378 7.418139 GGAAAGGAGGGAGTAGAAACTAATCTC 60.418 44.444 0.00 0.00 35.56 2.75
3130 5379 6.384595 GGAAAGGAGGGAGTAGAAACTAATCT 59.615 42.308 0.00 0.00 35.56 2.40
3131 5380 6.584488 GGAAAGGAGGGAGTAGAAACTAATC 58.416 44.000 0.00 0.00 35.56 1.75
3134 5383 4.021916 CGGAAAGGAGGGAGTAGAAACTA 58.978 47.826 0.00 0.00 35.56 2.24
3135 5384 2.832733 CGGAAAGGAGGGAGTAGAAACT 59.167 50.000 0.00 0.00 39.21 2.66
3136 5385 2.093606 CCGGAAAGGAGGGAGTAGAAAC 60.094 54.545 0.00 0.00 45.00 2.78
3137 5386 2.185387 CCGGAAAGGAGGGAGTAGAAA 58.815 52.381 0.00 0.00 45.00 2.52
3138 5387 1.078324 ACCGGAAAGGAGGGAGTAGAA 59.922 52.381 9.46 0.00 45.00 2.10
3139 5388 0.708802 ACCGGAAAGGAGGGAGTAGA 59.291 55.000 9.46 0.00 45.00 2.59
3140 5389 1.569653 AACCGGAAAGGAGGGAGTAG 58.430 55.000 9.46 0.00 45.00 2.57
3143 5392 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
3144 5393 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
3145 5394 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
3150 5399 5.866207 AGATAAGCCCTATAAACCGGAAAG 58.134 41.667 9.46 0.00 0.00 2.62
3153 5402 4.485875 TGAGATAAGCCCTATAAACCGGA 58.514 43.478 9.46 0.00 0.00 5.14
3154 5403 4.527038 TCTGAGATAAGCCCTATAAACCGG 59.473 45.833 0.00 0.00 0.00 5.28
3155 5404 5.723672 TCTGAGATAAGCCCTATAAACCG 57.276 43.478 0.00 0.00 0.00 4.44
3156 5405 8.926092 AAATTCTGAGATAAGCCCTATAAACC 57.074 34.615 0.00 0.00 0.00 3.27
3162 5411 9.975218 AAAACTAAAATTCTGAGATAAGCCCTA 57.025 29.630 0.00 0.00 0.00 3.53
3189 5438 9.434420 CAACCAAATTGAGCCTTATAAAATGAA 57.566 29.630 0.00 0.00 41.23 2.57
3190 5439 8.592809 ACAACCAAATTGAGCCTTATAAAATGA 58.407 29.630 0.00 0.00 41.23 2.57
3193 5442 7.875554 GGAACAACCAAATTGAGCCTTATAAAA 59.124 33.333 0.00 0.00 41.23 1.52
3194 5443 7.382898 GGAACAACCAAATTGAGCCTTATAAA 58.617 34.615 0.00 0.00 41.23 1.40
3197 5446 4.222810 GGGAACAACCAAATTGAGCCTTAT 59.777 41.667 0.00 0.00 41.23 1.73
3199 5448 2.368548 GGGAACAACCAAATTGAGCCTT 59.631 45.455 0.00 0.00 41.23 4.35
3201 5450 1.001974 GGGGAACAACCAAATTGAGCC 59.998 52.381 0.00 0.00 41.23 4.70
3202 5451 1.336795 CGGGGAACAACCAAATTGAGC 60.337 52.381 0.00 0.00 41.23 4.26
3203 5452 1.960689 ACGGGGAACAACCAAATTGAG 59.039 47.619 0.00 0.00 41.23 3.02
3204 5453 2.074729 ACGGGGAACAACCAAATTGA 57.925 45.000 0.00 0.00 41.23 2.57
3205 5454 2.900716 AACGGGGAACAACCAAATTG 57.099 45.000 0.00 0.00 44.60 2.32
3207 5456 2.946785 TGTAACGGGGAACAACCAAAT 58.053 42.857 0.00 0.00 41.20 2.32
3208 5457 2.431954 TGTAACGGGGAACAACCAAA 57.568 45.000 0.00 0.00 41.20 3.28
3209 5458 2.231529 CATGTAACGGGGAACAACCAA 58.768 47.619 0.00 0.00 41.20 3.67
3210 5459 1.143277 ACATGTAACGGGGAACAACCA 59.857 47.619 0.00 0.00 41.20 3.67
3211 5460 1.900245 ACATGTAACGGGGAACAACC 58.100 50.000 0.00 0.00 38.08 3.77
3212 5461 2.879646 TGAACATGTAACGGGGAACAAC 59.120 45.455 0.00 0.00 0.00 3.32
3214 5463 2.932855 TGAACATGTAACGGGGAACA 57.067 45.000 0.00 0.00 0.00 3.18
3215 5464 4.776795 ATTTGAACATGTAACGGGGAAC 57.223 40.909 0.00 0.00 0.00 3.62
3217 5466 4.827835 TGAAATTTGAACATGTAACGGGGA 59.172 37.500 0.00 0.00 0.00 4.81
3219 5468 6.442952 TCTTGAAATTTGAACATGTAACGGG 58.557 36.000 0.00 0.00 0.00 5.28
3220 5469 7.410728 GCATCTTGAAATTTGAACATGTAACGG 60.411 37.037 0.00 0.00 0.00 4.44
3221 5470 7.114670 TGCATCTTGAAATTTGAACATGTAACG 59.885 33.333 0.00 0.00 0.00 3.18
3222 5471 8.296799 TGCATCTTGAAATTTGAACATGTAAC 57.703 30.769 0.00 0.00 0.00 2.50
3223 5472 9.491675 AATGCATCTTGAAATTTGAACATGTAA 57.508 25.926 0.00 0.00 0.00 2.41
3225 5474 7.972832 AATGCATCTTGAAATTTGAACATGT 57.027 28.000 0.00 0.00 0.00 3.21
3237 5486 9.251792 GCATACAATGATTTAATGCATCTTGAA 57.748 29.630 13.66 0.00 41.94 2.69
3238 5487 8.414778 TGCATACAATGATTTAATGCATCTTGA 58.585 29.630 16.11 0.00 45.76 3.02
3239 5488 8.582433 TGCATACAATGATTTAATGCATCTTG 57.418 30.769 16.11 0.00 45.76 3.02
3345 5594 8.522830 CCTAATTAATGCTCTTGTTTTTCCTCA 58.477 33.333 0.00 0.00 0.00 3.86
3346 5595 8.523658 ACCTAATTAATGCTCTTGTTTTTCCTC 58.476 33.333 0.00 0.00 0.00 3.71
3347 5596 8.306761 CACCTAATTAATGCTCTTGTTTTTCCT 58.693 33.333 0.00 0.00 0.00 3.36
3348 5597 7.063426 GCACCTAATTAATGCTCTTGTTTTTCC 59.937 37.037 12.17 0.00 36.40 3.13
3349 5598 7.814587 AGCACCTAATTAATGCTCTTGTTTTTC 59.185 33.333 15.10 0.00 46.68 2.29
3350 5599 7.670364 AGCACCTAATTAATGCTCTTGTTTTT 58.330 30.769 15.10 0.00 46.68 1.94
3351 5600 7.232118 AGCACCTAATTAATGCTCTTGTTTT 57.768 32.000 15.10 0.00 46.68 2.43
3352 5601 6.840780 AGCACCTAATTAATGCTCTTGTTT 57.159 33.333 15.10 0.00 46.68 2.83
3360 5609 6.147656 AGTTTGCAAAAGCACCTAATTAATGC 59.852 34.615 14.67 11.70 39.74 3.56
3361 5610 7.656707 AGTTTGCAAAAGCACCTAATTAATG 57.343 32.000 14.67 0.00 0.00 1.90
3362 5611 8.364142 TGTAGTTTGCAAAAGCACCTAATTAAT 58.636 29.630 14.67 0.00 0.00 1.40
3364 5613 7.278461 TGTAGTTTGCAAAAGCACCTAATTA 57.722 32.000 14.67 0.00 0.00 1.40
3365 5614 6.155475 TGTAGTTTGCAAAAGCACCTAATT 57.845 33.333 14.67 0.00 0.00 1.40
3366 5615 5.782893 TGTAGTTTGCAAAAGCACCTAAT 57.217 34.783 14.67 0.00 0.00 1.73
3367 5616 5.584253 TTGTAGTTTGCAAAAGCACCTAA 57.416 34.783 14.67 0.82 0.00 2.69
3368 5617 5.584253 TTTGTAGTTTGCAAAAGCACCTA 57.416 34.783 14.67 7.87 33.51 3.08
3369 5618 4.464069 TTTGTAGTTTGCAAAAGCACCT 57.536 36.364 14.67 8.91 33.51 4.00
3370 5619 5.538067 TTTTTGTAGTTTGCAAAAGCACC 57.462 34.783 14.67 0.55 43.70 5.01
3389 5638 7.781324 AGATGGTGAGTGTTGGAATATTTTT 57.219 32.000 0.00 0.00 0.00 1.94
3390 5639 9.125026 GATAGATGGTGAGTGTTGGAATATTTT 57.875 33.333 0.00 0.00 0.00 1.82
3391 5640 8.497745 AGATAGATGGTGAGTGTTGGAATATTT 58.502 33.333 0.00 0.00 0.00 1.40
3392 5641 8.038862 AGATAGATGGTGAGTGTTGGAATATT 57.961 34.615 0.00 0.00 0.00 1.28
3393 5642 7.623999 AGATAGATGGTGAGTGTTGGAATAT 57.376 36.000 0.00 0.00 0.00 1.28
3394 5643 7.275183 CAAGATAGATGGTGAGTGTTGGAATA 58.725 38.462 0.00 0.00 0.00 1.75
3395 5644 5.965033 AGATAGATGGTGAGTGTTGGAAT 57.035 39.130 0.00 0.00 0.00 3.01
3398 5647 4.194640 CCAAGATAGATGGTGAGTGTTGG 58.805 47.826 0.00 0.00 33.08 3.77
3408 5657 4.760530 TCTCACCAACCAAGATAGATGG 57.239 45.455 0.00 0.00 43.84 3.51
3409 5658 7.636150 AAAATCTCACCAACCAAGATAGATG 57.364 36.000 0.00 0.00 0.00 2.90
3410 5659 7.890127 TCAAAAATCTCACCAACCAAGATAGAT 59.110 33.333 0.00 0.00 0.00 1.98
3411 5660 7.230747 TCAAAAATCTCACCAACCAAGATAGA 58.769 34.615 0.00 0.00 0.00 1.98
3412 5661 7.452880 TCAAAAATCTCACCAACCAAGATAG 57.547 36.000 0.00 0.00 0.00 2.08
3413 5662 7.831691 TTCAAAAATCTCACCAACCAAGATA 57.168 32.000 0.00 0.00 0.00 1.98
3414 5663 6.729690 TTCAAAAATCTCACCAACCAAGAT 57.270 33.333 0.00 0.00 0.00 2.40
3415 5664 6.729690 ATTCAAAAATCTCACCAACCAAGA 57.270 33.333 0.00 0.00 0.00 3.02
3416 5665 6.985645 TCAATTCAAAAATCTCACCAACCAAG 59.014 34.615 0.00 0.00 0.00 3.61
3417 5666 6.882656 TCAATTCAAAAATCTCACCAACCAA 58.117 32.000 0.00 0.00 0.00 3.67
3418 5667 6.477053 TCAATTCAAAAATCTCACCAACCA 57.523 33.333 0.00 0.00 0.00 3.67
3419 5668 5.406477 GCTCAATTCAAAAATCTCACCAACC 59.594 40.000 0.00 0.00 0.00 3.77
3420 5669 5.406477 GGCTCAATTCAAAAATCTCACCAAC 59.594 40.000 0.00 0.00 0.00 3.77
3421 5670 5.511202 GGGCTCAATTCAAAAATCTCACCAA 60.511 40.000 0.00 0.00 0.00 3.67
3422 5671 4.021192 GGGCTCAATTCAAAAATCTCACCA 60.021 41.667 0.00 0.00 0.00 4.17
3423 5672 4.221482 AGGGCTCAATTCAAAAATCTCACC 59.779 41.667 0.00 0.00 0.00 4.02
3424 5673 5.397142 AGGGCTCAATTCAAAAATCTCAC 57.603 39.130 0.00 0.00 0.00 3.51
3425 5674 8.821686 TTATAGGGCTCAATTCAAAAATCTCA 57.178 30.769 0.00 0.00 0.00 3.27
3426 5675 9.521503 GTTTATAGGGCTCAATTCAAAAATCTC 57.478 33.333 0.00 0.00 0.00 2.75
3427 5676 8.478066 GGTTTATAGGGCTCAATTCAAAAATCT 58.522 33.333 0.00 0.00 0.00 2.40
3428 5677 8.257306 TGGTTTATAGGGCTCAATTCAAAAATC 58.743 33.333 0.00 0.00 0.00 2.17
3429 5678 8.144862 TGGTTTATAGGGCTCAATTCAAAAAT 57.855 30.769 0.00 0.00 0.00 1.82
3430 5679 7.453126 TCTGGTTTATAGGGCTCAATTCAAAAA 59.547 33.333 0.00 0.00 0.00 1.94
3431 5680 6.951198 TCTGGTTTATAGGGCTCAATTCAAAA 59.049 34.615 0.00 0.00 0.00 2.44
3432 5681 6.489603 TCTGGTTTATAGGGCTCAATTCAAA 58.510 36.000 0.00 0.00 0.00 2.69
3433 5682 6.073447 TCTGGTTTATAGGGCTCAATTCAA 57.927 37.500 0.00 0.00 0.00 2.69
3434 5683 5.708736 TCTGGTTTATAGGGCTCAATTCA 57.291 39.130 0.00 0.00 0.00 2.57
3435 5684 6.039829 CCTTTCTGGTTTATAGGGCTCAATTC 59.960 42.308 0.00 0.00 0.00 2.17
3436 5685 5.893824 CCTTTCTGGTTTATAGGGCTCAATT 59.106 40.000 0.00 0.00 0.00 2.32
3437 5686 5.193728 TCCTTTCTGGTTTATAGGGCTCAAT 59.806 40.000 0.00 0.00 37.07 2.57
3438 5687 4.538490 TCCTTTCTGGTTTATAGGGCTCAA 59.462 41.667 0.00 0.00 37.07 3.02
3439 5688 4.108570 TCCTTTCTGGTTTATAGGGCTCA 58.891 43.478 0.00 0.00 37.07 4.26
3440 5689 4.445019 CCTCCTTTCTGGTTTATAGGGCTC 60.445 50.000 0.00 0.00 37.07 4.70
3441 5690 3.459969 CCTCCTTTCTGGTTTATAGGGCT 59.540 47.826 0.00 0.00 37.07 5.19
3442 5691 3.435169 CCCTCCTTTCTGGTTTATAGGGC 60.435 52.174 0.00 0.00 37.92 5.19
3443 5692 4.045022 TCCCTCCTTTCTGGTTTATAGGG 58.955 47.826 0.00 0.00 43.08 3.53
3444 5693 4.722279 ACTCCCTCCTTTCTGGTTTATAGG 59.278 45.833 0.00 0.00 37.07 2.57
3445 5694 5.959583 ACTCCCTCCTTTCTGGTTTATAG 57.040 43.478 0.00 0.00 37.07 1.31
3446 5695 6.267014 CGATACTCCCTCCTTTCTGGTTTATA 59.733 42.308 0.00 0.00 37.07 0.98
3447 5696 5.070580 CGATACTCCCTCCTTTCTGGTTTAT 59.929 44.000 0.00 0.00 37.07 1.40
3448 5697 4.404715 CGATACTCCCTCCTTTCTGGTTTA 59.595 45.833 0.00 0.00 37.07 2.01
3449 5698 3.197983 CGATACTCCCTCCTTTCTGGTTT 59.802 47.826 0.00 0.00 37.07 3.27
3450 5699 2.766828 CGATACTCCCTCCTTTCTGGTT 59.233 50.000 0.00 0.00 37.07 3.67
3451 5700 2.292323 ACGATACTCCCTCCTTTCTGGT 60.292 50.000 0.00 0.00 37.07 4.00
3452 5701 2.389715 ACGATACTCCCTCCTTTCTGG 58.610 52.381 0.00 0.00 37.10 3.86
3453 5702 5.069251 ACATTACGATACTCCCTCCTTTCTG 59.931 44.000 0.00 0.00 0.00 3.02
3454 5703 5.209659 ACATTACGATACTCCCTCCTTTCT 58.790 41.667 0.00 0.00 0.00 2.52
3455 5704 5.532664 ACATTACGATACTCCCTCCTTTC 57.467 43.478 0.00 0.00 0.00 2.62
3456 5705 7.289317 TCATTACATTACGATACTCCCTCCTTT 59.711 37.037 0.00 0.00 0.00 3.11
3457 5706 6.781014 TCATTACATTACGATACTCCCTCCTT 59.219 38.462 0.00 0.00 0.00 3.36
3458 5707 6.312529 TCATTACATTACGATACTCCCTCCT 58.687 40.000 0.00 0.00 0.00 3.69
3459 5708 6.585695 TCATTACATTACGATACTCCCTCC 57.414 41.667 0.00 0.00 0.00 4.30
3460 5709 9.570488 GTTATCATTACATTACGATACTCCCTC 57.430 37.037 0.00 0.00 0.00 4.30
3461 5710 8.242053 CGTTATCATTACATTACGATACTCCCT 58.758 37.037 0.00 0.00 31.91 4.20
3462 5711 7.008992 GCGTTATCATTACATTACGATACTCCC 59.991 40.741 0.00 0.00 31.91 4.30
3463 5712 7.008992 GGCGTTATCATTACATTACGATACTCC 59.991 40.741 0.00 0.00 31.91 3.85
3464 5713 7.539710 TGGCGTTATCATTACATTACGATACTC 59.460 37.037 0.00 0.00 31.91 2.59
3465 5714 7.372714 TGGCGTTATCATTACATTACGATACT 58.627 34.615 0.00 0.00 31.91 2.12
3466 5715 7.571089 TGGCGTTATCATTACATTACGATAC 57.429 36.000 0.00 0.00 31.91 2.24
3479 5728 6.037172 GTCACTAGTTTGATTGGCGTTATCAT 59.963 38.462 0.00 0.00 32.43 2.45
3857 6120 1.080569 GGCCAATGACTTTGCCACG 60.081 57.895 0.00 0.00 33.95 4.94
4042 6348 9.787532 ACATATAATTGTAACTTGACAACATGC 57.212 29.630 0.00 0.00 41.93 4.06
4114 6424 4.627467 ACACAAGTTGCTCGATCTCATAAC 59.373 41.667 1.81 0.00 0.00 1.89
4178 6492 1.000955 AGAGCAACTCAACCACTACCG 59.999 52.381 0.00 0.00 32.06 4.02
4183 6497 4.569943 TCAGATTAGAGCAACTCAACCAC 58.430 43.478 0.00 0.00 32.06 4.16
4197 6511 7.076842 ACGTGGTTCAATTCATTCAGATTAG 57.923 36.000 0.00 0.00 0.00 1.73
4536 6850 3.586892 CAACTCTACCTCGACCTTTTCC 58.413 50.000 0.00 0.00 0.00 3.13
4595 6909 7.972277 CCTCCTTCATCATCAATTTACACAAAG 59.028 37.037 0.00 0.00 0.00 2.77
4596 6910 7.669304 TCCTCCTTCATCATCAATTTACACAAA 59.331 33.333 0.00 0.00 0.00 2.83
4597 6911 7.174413 TCCTCCTTCATCATCAATTTACACAA 58.826 34.615 0.00 0.00 0.00 3.33
4598 6912 6.720309 TCCTCCTTCATCATCAATTTACACA 58.280 36.000 0.00 0.00 0.00 3.72
4650 6967 2.197324 GCCTCCAAACCCCACACA 59.803 61.111 0.00 0.00 0.00 3.72
4668 6985 1.381599 CCCACATGGTCCATTGGGG 60.382 63.158 28.14 24.13 37.92 4.96
4672 6989 1.000739 CAGGCCCACATGGTCCATT 59.999 57.895 0.00 0.00 40.85 3.16
4750 7077 2.408704 CAGTTAAGAAGAGAACGTGCGG 59.591 50.000 0.00 0.00 0.00 5.69
4754 7081 8.209917 ACATTTTTCAGTTAAGAAGAGAACGT 57.790 30.769 0.00 0.00 0.00 3.99
4769 7096 8.017373 AGTGACGATAAACATGACATTTTTCAG 58.983 33.333 0.00 0.34 0.00 3.02
4790 7120 4.189452 TGGAACAAGGGGTCAAAAGTGAC 61.189 47.826 0.00 0.00 45.16 3.67
4809 7139 0.692756 TATTGGATGTCCCGCCTGGA 60.693 55.000 0.00 0.00 42.41 3.86
4923 7253 2.012237 TTTTTCGCGCCACGTGTTA 58.988 47.368 15.65 0.00 44.19 2.41
4941 7271 3.973472 AGGAACCTCCTTTTCTTGGTT 57.027 42.857 0.00 0.00 46.91 3.67
4981 7311 2.048503 ACGGGCTAGCAACGTGTC 60.049 61.111 28.32 6.17 39.64 3.67
4985 7315 2.537792 TTCTCGACGGGCTAGCAACG 62.538 60.000 23.87 23.87 0.00 4.10
5131 7465 5.317808 TCTCGTTTGGATCCCATTGTAAAA 58.682 37.500 9.90 0.00 31.53 1.52
5134 7468 4.561500 TTCTCGTTTGGATCCCATTGTA 57.438 40.909 9.90 0.00 31.53 2.41
5245 7579 7.808381 TGTTTCAAATTGTTGTTCACGTCTTTA 59.192 29.630 0.00 0.00 36.07 1.85
5249 7583 6.402017 CATGTTTCAAATTGTTGTTCACGTC 58.598 36.000 0.00 0.00 36.07 4.34
5251 7585 5.518128 TCCATGTTTCAAATTGTTGTTCACG 59.482 36.000 0.00 0.00 36.07 4.35
5252 7586 6.900568 TCCATGTTTCAAATTGTTGTTCAC 57.099 33.333 0.00 0.00 36.07 3.18
5322 7658 8.572855 TTGGTTTCCATCAATTCAAAAGTTTT 57.427 26.923 0.00 0.00 31.53 2.43
5336 7672 9.541143 TTTTCTGTTTCTTATTTGGTTTCCATC 57.459 29.630 0.00 0.00 31.53 3.51
5450 7787 0.583438 CCAAATGCATAGAGGCGACG 59.417 55.000 0.00 0.00 36.28 5.12
5467 7804 3.948735 GGCAAGTAGTAGTTGGCCA 57.051 52.632 26.30 0.00 45.20 5.36
5472 7809 4.003648 GCTCATTGTGGCAAGTAGTAGTT 58.996 43.478 0.00 0.00 0.00 2.24
5487 7824 6.044682 GGAAAACCCTATTTGATGCTCATTG 58.955 40.000 0.00 0.00 0.00 2.82
5488 7825 6.225981 GGAAAACCCTATTTGATGCTCATT 57.774 37.500 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.