Multiple sequence alignment - TraesCS3D01G219700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G219700 chr3D 100.000 5533 0 0 1 5533 299603931 299598399 0.000000e+00 10218.0
1 TraesCS3D01G219700 chr3D 87.634 186 10 5 3252 3426 278679721 278679904 2.610000e-48 204.0
2 TraesCS3D01G219700 chr3D 84.615 78 8 3 5397 5472 123018583 123018658 2.140000e-09 75.0
3 TraesCS3D01G219700 chr3A 92.693 3011 134 43 296 3250 436461143 436464123 0.000000e+00 4263.0
4 TraesCS3D01G219700 chr3A 95.152 1217 49 4 4018 5228 436464751 436465963 0.000000e+00 1912.0
5 TraesCS3D01G219700 chr3A 94.158 582 29 3 3429 4007 436464127 436464706 0.000000e+00 881.0
6 TraesCS3D01G219700 chr3A 92.823 209 14 1 3432 3640 743489257 743489050 9.010000e-78 302.0
7 TraesCS3D01G219700 chr3A 86.508 126 9 6 1 124 164407872 164407753 1.250000e-26 132.0
8 TraesCS3D01G219700 chr3A 85.484 124 10 7 4 124 610389761 610389643 7.530000e-24 122.0
9 TraesCS3D01G219700 chr3A 94.915 59 3 0 3249 3307 558811554 558811612 5.900000e-15 93.5
10 TraesCS3D01G219700 chr3B 92.742 2921 112 38 386 3250 425392390 425389514 0.000000e+00 4128.0
11 TraesCS3D01G219700 chr3B 94.457 1299 54 8 4010 5306 425388823 425387541 0.000000e+00 1984.0
12 TraesCS3D01G219700 chr3B 92.110 583 38 5 3432 4011 425389507 425388930 0.000000e+00 815.0
13 TraesCS3D01G219700 chr3B 89.362 141 9 2 5397 5533 425387547 425387409 7.370000e-39 172.0
14 TraesCS3D01G219700 chr3B 90.083 121 9 3 3308 3426 518618285 518618404 2.670000e-33 154.0
15 TraesCS3D01G219700 chr3B 90.435 115 10 1 3311 3424 371353326 371353212 3.450000e-32 150.0
16 TraesCS3D01G219700 chr3B 90.000 110 5 3 5302 5406 548551149 548551257 2.690000e-28 137.0
17 TraesCS3D01G219700 chr3B 95.000 60 3 0 3248 3307 518618200 518618259 1.640000e-15 95.3
18 TraesCS3D01G219700 chr3B 89.706 68 7 0 3246 3313 419553831 419553898 2.750000e-13 87.9
19 TraesCS3D01G219700 chr4A 89.975 399 34 2 4293 4691 667775054 667775446 1.370000e-140 510.0
20 TraesCS3D01G219700 chr4A 88.038 209 14 6 5077 5284 667788543 667788741 2.580000e-58 237.0
21 TraesCS3D01G219700 chr4A 93.985 133 7 1 4683 4815 667787997 667788128 3.380000e-47 200.0
22 TraesCS3D01G219700 chr4A 81.250 128 17 6 1 126 712607836 712607958 4.560000e-16 97.1
23 TraesCS3D01G219700 chr4A 91.803 61 5 0 4982 5042 667788471 667788531 9.880000e-13 86.1
24 TraesCS3D01G219700 chr6A 93.016 315 19 1 3677 3988 222558702 222558388 1.820000e-124 457.0
25 TraesCS3D01G219700 chr6A 78.660 403 51 16 4886 5287 291917862 291918230 9.270000e-58 235.0
26 TraesCS3D01G219700 chr6A 79.602 201 14 13 3252 3425 1763104 1763304 9.740000e-23 119.0
27 TraesCS3D01G219700 chr6A 97.143 35 1 0 4986 5020 291917996 291918030 5.990000e-05 60.2
28 TraesCS3D01G219700 chr7D 93.780 209 12 1 3432 3640 491875013 491874806 4.160000e-81 313.0
29 TraesCS3D01G219700 chr7D 92.925 212 14 1 3429 3640 426446439 426446649 1.940000e-79 307.0
30 TraesCS3D01G219700 chr7D 92.179 179 13 1 3072 3250 426446258 426446435 9.200000e-63 252.0
31 TraesCS3D01G219700 chr7D 91.667 180 13 2 3072 3250 491875198 491875020 1.190000e-61 248.0
32 TraesCS3D01G219700 chr7D 83.594 128 15 4 1 126 21651818 21651695 1.260000e-21 115.0
33 TraesCS3D01G219700 chr7D 81.600 125 16 6 4 126 21611153 21611034 4.560000e-16 97.1
34 TraesCS3D01G219700 chr7D 96.491 57 2 0 3252 3308 582146598 582146542 1.640000e-15 95.3
35 TraesCS3D01G219700 chr1D 95.385 195 9 0 3444 3638 474450484 474450290 1.500000e-80 311.0
36 TraesCS3D01G219700 chr1D 81.141 403 41 20 4886 5287 265141550 265141182 1.950000e-74 291.0
37 TraesCS3D01G219700 chr1D 92.737 179 12 1 3072 3250 474450679 474450502 1.980000e-64 257.0
38 TraesCS3D01G219700 chr1D 80.597 201 12 11 3252 3425 459178282 459178482 4.500000e-26 130.0
39 TraesCS3D01G219700 chr1D 97.143 35 1 0 4986 5020 265141416 265141382 5.990000e-05 60.2
40 TraesCS3D01G219700 chr4D 92.925 212 14 1 3429 3640 25399927 25400137 1.940000e-79 307.0
41 TraesCS3D01G219700 chr4D 92.179 179 13 1 3072 3250 25399746 25399923 9.200000e-63 252.0
42 TraesCS3D01G219700 chr4D 93.137 102 6 1 3320 3420 470124515 470124616 1.240000e-31 148.0
43 TraesCS3D01G219700 chr4D 83.333 126 14 6 1 124 505364949 505365069 5.860000e-20 110.0
44 TraesCS3D01G219700 chr5D 92.823 209 14 1 3432 3640 385111622 385111415 9.010000e-78 302.0
45 TraesCS3D01G219700 chr5D 88.506 174 19 1 3077 3250 385111801 385111629 5.620000e-50 209.0
46 TraesCS3D01G219700 chr5D 89.815 108 7 2 3320 3426 530794939 530794835 9.670000e-28 135.0
47 TraesCS3D01G219700 chr5D 83.333 84 8 5 5397 5476 361646204 361646123 7.690000e-09 73.1
48 TraesCS3D01G219700 chr4B 91.509 212 17 1 3429 3640 80005448 80005658 1.950000e-74 291.0
49 TraesCS3D01G219700 chr4B 92.982 114 7 1 3320 3432 371788676 371788563 1.230000e-36 165.0
50 TraesCS3D01G219700 chr7B 92.697 178 12 1 3072 3249 32341457 32341281 7.110000e-64 255.0
51 TraesCS3D01G219700 chr7B 91.919 99 4 1 5305 5399 40404463 40404561 9.670000e-28 135.0
52 TraesCS3D01G219700 chr7B 91.837 98 4 1 5305 5398 17665587 17665490 3.480000e-27 134.0
53 TraesCS3D01G219700 chr7B 91.753 97 4 1 5305 5397 41171609 41171705 1.250000e-26 132.0
54 TraesCS3D01G219700 chr5B 82.524 206 8 9 3248 3426 262824401 262824605 7.420000e-34 156.0
55 TraesCS3D01G219700 chr5B 91.176 102 4 2 5301 5398 610685891 610685991 3.480000e-27 134.0
56 TraesCS3D01G219700 chr5B 91.000 100 5 1 5302 5397 68902393 68902492 1.250000e-26 132.0
57 TraesCS3D01G219700 chr5B 85.714 77 7 4 5397 5471 432174716 432174790 1.650000e-10 78.7
58 TraesCS3D01G219700 chr2B 92.523 107 7 1 3321 3426 438929286 438929180 9.600000e-33 152.0
59 TraesCS3D01G219700 chr2B 93.204 103 6 1 3320 3421 569130889 569130787 3.450000e-32 150.0
60 TraesCS3D01G219700 chr2B 91.176 102 5 1 5300 5397 695410849 695410950 9.670000e-28 135.0
61 TraesCS3D01G219700 chr2B 92.708 96 3 1 5300 5391 695437535 695437630 9.670000e-28 135.0
62 TraesCS3D01G219700 chr6D 90.741 108 8 2 3320 3425 43060522 43060629 5.780000e-30 143.0
63 TraesCS3D01G219700 chr2D 91.429 105 8 1 3321 3424 82889916 82889812 5.780000e-30 143.0
64 TraesCS3D01G219700 chr2D 84.146 82 9 3 5397 5476 58513939 58514018 5.940000e-10 76.8
65 TraesCS3D01G219700 chr6B 86.508 126 12 5 1 124 392491611 392491489 3.480000e-27 134.0
66 TraesCS3D01G219700 chr2A 90.476 105 4 3 5298 5397 710765988 710766091 3.480000e-27 134.0
67 TraesCS3D01G219700 chr5A 83.200 125 14 5 2 124 283632872 283632753 2.110000e-19 108.0
68 TraesCS3D01G219700 chr5A 85.897 78 6 4 5397 5472 44801072 44801146 1.650000e-10 78.7
69 TraesCS3D01G219700 chr7A 81.890 127 17 4 1 126 21803858 21803737 9.810000e-18 102.0
70 TraesCS3D01G219700 chr7A 85.897 78 7 4 5397 5472 705217981 705217906 4.590000e-11 80.5
71 TraesCS3D01G219700 chr7A 83.750 80 9 4 5397 5474 495549516 495549593 7.690000e-09 73.1
72 TraesCS3D01G219700 chr1B 85.185 81 8 4 5397 5475 634510147 634510069 4.590000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G219700 chr3D 299598399 299603931 5532 True 10218.00 10218 100.00000 1 5533 1 chr3D.!!$R1 5532
1 TraesCS3D01G219700 chr3A 436461143 436465963 4820 False 2352.00 4263 94.00100 296 5228 3 chr3A.!!$F2 4932
2 TraesCS3D01G219700 chr3B 425387409 425392390 4981 True 1774.75 4128 92.16775 386 5533 4 chr3B.!!$R2 5147

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
304 305 0.179189 GCGGACCGATTTTTCAGCTG 60.179 55.0 20.5 7.63 31.11 4.24 F
1346 1379 0.106318 AGCAATCCTGGGGAATCTGC 60.106 55.0 0.0 9.27 36.65 4.26 F
2417 2476 0.391661 TCGCCAGCTCCTGAATTGTC 60.392 55.0 0.0 0.00 32.44 3.18 F
3421 3500 0.607620 TGGCAGCAAACCAATTAGCC 59.392 50.0 0.0 0.00 40.93 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1891 1943 0.107312 CCCAATGTCCTGAGCTGGAG 60.107 60.0 0.00 0.0 36.69 3.86 R
2857 2916 0.255890 AGCTCGTATGGGTTTGGCAT 59.744 50.0 0.00 0.0 0.00 4.40 R
3582 3661 0.035458 ACTTTTCTGCGGTCCTCAGG 59.965 55.0 9.01 0.0 32.63 3.86 R
5301 5499 0.035152 TTGGGACGGAGCGAGTAGTA 60.035 55.0 0.00 0.0 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.335400 AAATCCACCACAACATTCAACC 57.665 40.909 0.00 0.00 0.00 3.77
47 48 2.443958 TCCACCACAACATTCAACCA 57.556 45.000 0.00 0.00 0.00 3.67
48 49 2.956132 TCCACCACAACATTCAACCAT 58.044 42.857 0.00 0.00 0.00 3.55
49 50 2.627221 TCCACCACAACATTCAACCATG 59.373 45.455 0.00 0.00 0.00 3.66
50 51 2.406130 CACCACAACATTCAACCATGC 58.594 47.619 0.00 0.00 0.00 4.06
51 52 2.037901 ACCACAACATTCAACCATGCA 58.962 42.857 0.00 0.00 0.00 3.96
52 53 2.633967 ACCACAACATTCAACCATGCAT 59.366 40.909 0.00 0.00 0.00 3.96
53 54 2.997303 CCACAACATTCAACCATGCATG 59.003 45.455 20.19 20.19 36.42 4.06
54 55 3.306156 CCACAACATTCAACCATGCATGA 60.306 43.478 28.31 7.94 34.33 3.07
55 56 3.924073 CACAACATTCAACCATGCATGAG 59.076 43.478 28.31 19.16 34.33 2.90
56 57 3.827876 ACAACATTCAACCATGCATGAGA 59.172 39.130 28.31 18.42 34.33 3.27
57 58 4.281435 ACAACATTCAACCATGCATGAGAA 59.719 37.500 28.31 24.73 34.33 2.87
58 59 5.221481 ACAACATTCAACCATGCATGAGAAA 60.221 36.000 28.31 15.58 34.33 2.52
59 60 5.471556 ACATTCAACCATGCATGAGAAAA 57.528 34.783 28.31 15.91 34.33 2.29
60 61 6.045072 ACATTCAACCATGCATGAGAAAAT 57.955 33.333 28.31 17.30 34.33 1.82
61 62 5.872617 ACATTCAACCATGCATGAGAAAATG 59.127 36.000 28.31 26.83 34.33 2.32
62 63 5.471556 TTCAACCATGCATGAGAAAATGT 57.528 34.783 28.31 12.19 0.00 2.71
63 64 5.063180 TCAACCATGCATGAGAAAATGTC 57.937 39.130 28.31 0.00 0.00 3.06
64 65 4.768448 TCAACCATGCATGAGAAAATGTCT 59.232 37.500 28.31 4.07 40.25 3.41
65 66 5.244402 TCAACCATGCATGAGAAAATGTCTT 59.756 36.000 28.31 3.44 36.41 3.01
66 67 5.320549 ACCATGCATGAGAAAATGTCTTC 57.679 39.130 28.31 0.00 36.41 2.87
67 68 4.768448 ACCATGCATGAGAAAATGTCTTCA 59.232 37.500 28.31 0.00 36.41 3.02
68 69 5.421056 ACCATGCATGAGAAAATGTCTTCAT 59.579 36.000 28.31 0.00 36.41 2.57
69 70 5.977725 CCATGCATGAGAAAATGTCTTCATC 59.022 40.000 28.31 0.00 36.41 2.92
70 71 5.571784 TGCATGAGAAAATGTCTTCATCC 57.428 39.130 0.00 0.00 36.41 3.51
71 72 5.011586 TGCATGAGAAAATGTCTTCATCCA 58.988 37.500 0.00 0.00 36.41 3.41
72 73 5.477637 TGCATGAGAAAATGTCTTCATCCAA 59.522 36.000 0.00 0.00 36.41 3.53
73 74 6.153851 TGCATGAGAAAATGTCTTCATCCAAT 59.846 34.615 0.00 0.00 36.41 3.16
74 75 7.039882 GCATGAGAAAATGTCTTCATCCAATT 58.960 34.615 0.00 0.00 36.41 2.32
75 76 8.192774 GCATGAGAAAATGTCTTCATCCAATTA 58.807 33.333 0.00 0.00 36.41 1.40
204 205 8.991243 ATGTATGTTCAATTTTGGTTCTCATG 57.009 30.769 0.00 0.00 0.00 3.07
205 206 7.950512 TGTATGTTCAATTTTGGTTCTCATGT 58.049 30.769 0.00 0.00 0.00 3.21
206 207 8.420222 TGTATGTTCAATTTTGGTTCTCATGTT 58.580 29.630 0.00 0.00 0.00 2.71
207 208 9.906660 GTATGTTCAATTTTGGTTCTCATGTTA 57.093 29.630 0.00 0.00 0.00 2.41
209 210 8.815141 TGTTCAATTTTGGTTCTCATGTTATG 57.185 30.769 0.00 0.00 0.00 1.90
210 211 8.637099 TGTTCAATTTTGGTTCTCATGTTATGA 58.363 29.630 0.00 0.00 37.76 2.15
234 235 9.912634 TGAGTCTAAATTTTCATCAACCAATTC 57.087 29.630 0.00 0.00 0.00 2.17
237 238 9.912634 GTCTAAATTTTCATCAACCAATTCTCA 57.087 29.630 0.00 0.00 0.00 3.27
238 239 9.912634 TCTAAATTTTCATCAACCAATTCTCAC 57.087 29.630 0.00 0.00 0.00 3.51
239 240 9.695526 CTAAATTTTCATCAACCAATTCTCACA 57.304 29.630 0.00 0.00 0.00 3.58
240 241 7.951530 AATTTTCATCAACCAATTCTCACAC 57.048 32.000 0.00 0.00 0.00 3.82
241 242 5.452078 TTTCATCAACCAATTCTCACACC 57.548 39.130 0.00 0.00 0.00 4.16
242 243 4.097551 TCATCAACCAATTCTCACACCA 57.902 40.909 0.00 0.00 0.00 4.17
243 244 4.468713 TCATCAACCAATTCTCACACCAA 58.531 39.130 0.00 0.00 0.00 3.67
244 245 4.278170 TCATCAACCAATTCTCACACCAAC 59.722 41.667 0.00 0.00 0.00 3.77
245 246 2.955660 TCAACCAATTCTCACACCAACC 59.044 45.455 0.00 0.00 0.00 3.77
246 247 1.995376 ACCAATTCTCACACCAACCC 58.005 50.000 0.00 0.00 0.00 4.11
247 248 1.216678 ACCAATTCTCACACCAACCCA 59.783 47.619 0.00 0.00 0.00 4.51
248 249 2.158325 ACCAATTCTCACACCAACCCAT 60.158 45.455 0.00 0.00 0.00 4.00
249 250 2.231964 CCAATTCTCACACCAACCCATG 59.768 50.000 0.00 0.00 0.00 3.66
250 251 3.156293 CAATTCTCACACCAACCCATGA 58.844 45.455 0.00 0.00 0.00 3.07
251 252 2.566833 TTCTCACACCAACCCATGAG 57.433 50.000 0.00 0.00 39.99 2.90
252 253 1.434188 TCTCACACCAACCCATGAGT 58.566 50.000 0.00 0.00 39.68 3.41
253 254 1.774254 TCTCACACCAACCCATGAGTT 59.226 47.619 0.00 0.00 39.68 3.01
254 255 2.976185 TCTCACACCAACCCATGAGTTA 59.024 45.455 0.00 0.00 39.68 2.24
255 256 3.587061 TCTCACACCAACCCATGAGTTAT 59.413 43.478 0.00 0.00 39.68 1.89
256 257 4.780554 TCTCACACCAACCCATGAGTTATA 59.219 41.667 0.00 0.00 39.68 0.98
257 258 5.249622 TCTCACACCAACCCATGAGTTATAA 59.750 40.000 0.00 0.00 39.68 0.98
258 259 6.069673 TCTCACACCAACCCATGAGTTATAAT 60.070 38.462 0.00 0.00 39.68 1.28
259 260 6.119536 TCACACCAACCCATGAGTTATAATC 58.880 40.000 0.00 0.00 0.00 1.75
260 261 6.069673 TCACACCAACCCATGAGTTATAATCT 60.070 38.462 0.00 0.00 0.00 2.40
261 262 6.603201 CACACCAACCCATGAGTTATAATCTT 59.397 38.462 0.00 0.00 0.00 2.40
262 263 7.773224 CACACCAACCCATGAGTTATAATCTTA 59.227 37.037 0.00 0.00 0.00 2.10
263 264 7.993183 ACACCAACCCATGAGTTATAATCTTAG 59.007 37.037 0.00 0.00 0.00 2.18
264 265 7.993183 CACCAACCCATGAGTTATAATCTTAGT 59.007 37.037 0.00 0.00 0.00 2.24
265 266 9.220906 ACCAACCCATGAGTTATAATCTTAGTA 57.779 33.333 0.00 0.00 0.00 1.82
266 267 9.490379 CCAACCCATGAGTTATAATCTTAGTAC 57.510 37.037 0.00 0.00 0.00 2.73
269 270 9.209048 ACCCATGAGTTATAATCTTAGTACACA 57.791 33.333 0.00 0.00 0.00 3.72
270 271 9.477484 CCCATGAGTTATAATCTTAGTACACAC 57.523 37.037 0.00 0.00 0.00 3.82
283 284 9.871238 ATCTTAGTACACACATTGTTTACCTAG 57.129 33.333 0.00 0.00 39.91 3.02
284 285 7.816031 TCTTAGTACACACATTGTTTACCTAGC 59.184 37.037 0.00 0.00 39.91 3.42
285 286 4.927425 AGTACACACATTGTTTACCTAGCG 59.073 41.667 0.00 0.00 39.91 4.26
286 287 2.482721 ACACACATTGTTTACCTAGCGC 59.517 45.455 0.00 0.00 33.09 5.92
287 288 1.730064 ACACATTGTTTACCTAGCGCG 59.270 47.619 0.00 0.00 0.00 6.86
288 289 1.062002 CACATTGTTTACCTAGCGCGG 59.938 52.381 8.83 0.00 0.00 6.46
289 290 1.066716 ACATTGTTTACCTAGCGCGGA 60.067 47.619 8.83 0.00 0.00 5.54
290 291 1.326548 CATTGTTTACCTAGCGCGGAC 59.673 52.381 8.83 0.00 0.00 4.79
291 292 0.390209 TTGTTTACCTAGCGCGGACC 60.390 55.000 8.83 0.00 0.00 4.46
292 293 1.875364 GTTTACCTAGCGCGGACCG 60.875 63.158 10.29 10.29 40.75 4.79
293 294 2.045708 TTTACCTAGCGCGGACCGA 61.046 57.895 20.50 0.00 40.02 4.69
294 295 1.386525 TTTACCTAGCGCGGACCGAT 61.387 55.000 20.50 4.89 40.02 4.18
295 296 1.386525 TTACCTAGCGCGGACCGATT 61.387 55.000 20.50 4.14 40.02 3.34
296 297 1.386525 TACCTAGCGCGGACCGATTT 61.387 55.000 20.50 3.74 40.02 2.17
297 298 1.520787 CCTAGCGCGGACCGATTTT 60.521 57.895 20.50 1.76 40.02 1.82
298 299 1.087771 CCTAGCGCGGACCGATTTTT 61.088 55.000 20.50 0.00 40.02 1.94
299 300 0.300789 CTAGCGCGGACCGATTTTTC 59.699 55.000 20.50 0.00 40.02 2.29
300 301 0.390078 TAGCGCGGACCGATTTTTCA 60.390 50.000 20.50 0.00 40.02 2.69
301 302 1.226018 GCGCGGACCGATTTTTCAG 60.226 57.895 20.50 0.00 40.02 3.02
302 303 1.226018 CGCGGACCGATTTTTCAGC 60.226 57.895 20.50 0.00 40.02 4.26
303 304 1.635663 CGCGGACCGATTTTTCAGCT 61.636 55.000 20.50 0.00 40.02 4.24
304 305 0.179189 GCGGACCGATTTTTCAGCTG 60.179 55.000 20.50 7.63 31.11 4.24
305 306 1.156736 CGGACCGATTTTTCAGCTGT 58.843 50.000 14.67 0.00 0.00 4.40
306 307 1.535462 CGGACCGATTTTTCAGCTGTT 59.465 47.619 14.67 0.00 0.00 3.16
307 308 2.665519 CGGACCGATTTTTCAGCTGTTG 60.666 50.000 14.67 0.00 0.00 3.33
312 313 4.819630 ACCGATTTTTCAGCTGTTGACTTA 59.180 37.500 14.67 0.00 34.94 2.24
313 314 5.473504 ACCGATTTTTCAGCTGTTGACTTAT 59.526 36.000 14.67 0.00 34.94 1.73
319 320 4.776795 TCAGCTGTTGACTTATGTACGA 57.223 40.909 14.67 0.00 0.00 3.43
337 338 6.893759 TGTACGAAACACTATTTTCACATGG 58.106 36.000 0.00 0.00 35.54 3.66
371 372 3.858238 GGCTGTCATCGTAGACACTTTAC 59.142 47.826 8.27 0.00 43.18 2.01
377 378 7.823665 TGTCATCGTAGACACTTTACACTAAT 58.176 34.615 8.27 0.00 43.18 1.73
426 429 5.092781 GCTTTACACATGAATGTTTACCCG 58.907 41.667 0.00 0.00 39.39 5.28
431 434 2.091541 CATGAATGTTTACCCGGCACT 58.908 47.619 0.00 0.00 0.00 4.40
434 438 2.303600 TGAATGTTTACCCGGCACTACT 59.696 45.455 0.00 0.00 0.00 2.57
446 450 4.038763 CCCGGCACTACTGATTTATCTGTA 59.961 45.833 0.00 8.55 39.30 2.74
464 468 5.414360 TCTGTATTCTCACAAGAGTCATGC 58.586 41.667 0.00 0.00 42.66 4.06
582 588 2.358898 GTCAAGGACAGCACAACACAAT 59.641 45.455 0.00 0.00 32.09 2.71
616 622 0.248296 TGAAACACGAAAACAGCGCC 60.248 50.000 2.29 0.00 0.00 6.53
838 871 4.332543 TTCCTCCTCACGCCCCCT 62.333 66.667 0.00 0.00 0.00 4.79
884 917 2.033448 CCCTAAACCCACGCAGCA 59.967 61.111 0.00 0.00 0.00 4.41
885 918 2.332654 CCCTAAACCCACGCAGCAC 61.333 63.158 0.00 0.00 0.00 4.40
886 919 2.332654 CCTAAACCCACGCAGCACC 61.333 63.158 0.00 0.00 0.00 5.01
1248 1281 2.605854 TACCGCTCCTCTCCGTCCTC 62.606 65.000 0.00 0.00 0.00 3.71
1253 1286 3.522731 CCTCTCCGTCCTCCGCTG 61.523 72.222 0.00 0.00 34.38 5.18
1304 1337 5.643379 TTGCCTCCTTAATGCTGTTTTAG 57.357 39.130 0.00 0.00 0.00 1.85
1346 1379 0.106318 AGCAATCCTGGGGAATCTGC 60.106 55.000 0.00 9.27 36.65 4.26
1478 1512 1.398692 TTTTGGGACTTGAGCGCTTT 58.601 45.000 13.26 0.00 0.00 3.51
1561 1595 1.869767 CTGTGCTTGTCTTCTTTCGCT 59.130 47.619 0.00 0.00 0.00 4.93
1562 1596 2.288666 TGTGCTTGTCTTCTTTCGCTT 58.711 42.857 0.00 0.00 0.00 4.68
1563 1597 2.032054 TGTGCTTGTCTTCTTTCGCTTG 59.968 45.455 0.00 0.00 0.00 4.01
1564 1598 1.603802 TGCTTGTCTTCTTTCGCTTGG 59.396 47.619 0.00 0.00 0.00 3.61
1565 1599 1.068954 GCTTGTCTTCTTTCGCTTGGG 60.069 52.381 0.00 0.00 0.00 4.12
1680 1732 2.412089 GCGTCATTTGCTTAAGTCGACT 59.588 45.455 13.58 13.58 0.00 4.18
1702 1754 6.038356 ACTGCTTGAAACTTGAAAGACATTG 58.962 36.000 0.00 0.00 0.00 2.82
1711 1763 9.920826 GAAACTTGAAAGACATTGGAAAATTTC 57.079 29.630 0.00 0.00 0.00 2.17
1741 1793 0.532573 ACAGTCTACACCAGCCATCG 59.467 55.000 0.00 0.00 0.00 3.84
1744 1796 0.525668 GTCTACACCAGCCATCGTCG 60.526 60.000 0.00 0.00 0.00 5.12
1778 1830 1.691976 TGCTAGTGTACTTGTGCAGGT 59.308 47.619 0.00 0.00 0.00 4.00
1814 1866 5.359576 GTGTGATACTTCTGGTCTCTCTCAT 59.640 44.000 0.00 0.00 0.00 2.90
1891 1943 1.135689 CATGAAGGCCTGCGTTTACAC 60.136 52.381 5.69 0.00 0.00 2.90
1957 2009 5.760253 CGGACCACAAGCTAAATATGAAGAT 59.240 40.000 0.00 0.00 0.00 2.40
2126 2178 2.495669 TCTCACTGCACATGACGGATTA 59.504 45.455 0.00 0.00 0.00 1.75
2135 2187 4.868171 GCACATGACGGATTACTGTTTCTA 59.132 41.667 0.00 0.00 35.56 2.10
2226 2285 4.754667 GTTCCTCGGTCGCCCACC 62.755 72.222 0.00 0.00 42.69 4.61
2356 2415 1.610086 TTCATTGCTTGCCAGGGGG 60.610 57.895 0.00 0.00 37.18 5.40
2364 2423 3.132029 TTGCCAGGGGGTCACTGTG 62.132 63.158 0.17 0.17 36.17 3.66
2391 2450 5.320549 ACAAAATGTCTGATCCATCAAGC 57.679 39.130 0.00 0.00 36.18 4.01
2400 2459 3.332034 TGATCCATCAAGCTGCATATCG 58.668 45.455 1.02 0.00 33.08 2.92
2417 2476 0.391661 TCGCCAGCTCCTGAATTGTC 60.392 55.000 0.00 0.00 32.44 3.18
2532 2591 4.494855 CGTCTTTTGCATAGGAGCTTTAGC 60.495 45.833 0.00 0.00 42.49 3.09
2677 2736 3.782523 ACCTATGGGCTTTGATCTTGAGA 59.217 43.478 0.00 0.00 35.63 3.27
2855 2914 3.326297 AGAAAGGACTGGGAAGACAAGAG 59.674 47.826 0.00 0.00 0.00 2.85
2857 2916 3.544698 AGGACTGGGAAGACAAGAGTA 57.455 47.619 0.00 0.00 0.00 2.59
2894 2953 1.277557 GCTTGAGTCACAGGTGATCCT 59.722 52.381 5.29 0.00 46.37 3.24
2901 2960 4.421131 AGTCACAGGTGATCCTTCTTACT 58.579 43.478 5.29 0.00 43.07 2.24
2902 2961 4.221703 AGTCACAGGTGATCCTTCTTACTG 59.778 45.833 5.29 0.00 43.07 2.74
2912 2981 5.302059 TGATCCTTCTTACTGGATTAGGTCG 59.698 44.000 0.00 0.00 42.56 4.79
2948 3017 7.065803 CGTAGGGTTGAATTATGTCACAAGAAT 59.934 37.037 0.00 0.00 0.00 2.40
2951 3020 7.671398 AGGGTTGAATTATGTCACAAGAATTCT 59.329 33.333 20.88 0.88 38.53 2.40
2978 3047 8.685838 AATTAAAGTCTAGCAAGTACCAACAA 57.314 30.769 0.00 0.00 0.00 2.83
2980 3049 3.650139 AGTCTAGCAAGTACCAACAACG 58.350 45.455 0.00 0.00 0.00 4.10
2988 3063 3.557228 AGTACCAACAACGTTTACCCA 57.443 42.857 0.00 0.00 0.00 4.51
3001 3076 3.066203 CGTTTACCCAAAAGTTGCAGAGT 59.934 43.478 0.00 0.00 0.00 3.24
3097 3176 6.484364 AGGTGAAATGTTGTCTTTTCCAAT 57.516 33.333 0.00 0.00 37.10 3.16
3161 3240 4.475944 CCTGAATGCTTTTAGTTTCCACG 58.524 43.478 3.85 0.00 0.00 4.94
3172 3251 2.175202 AGTTTCCACGCTCAGAGAGAT 58.825 47.619 8.35 0.00 0.00 2.75
3183 3262 7.328249 CCACGCTCAGAGAGATATTTTATCTTC 59.672 40.741 8.35 0.59 0.00 2.87
3229 3308 7.489113 AGAGTTTTTATTGTCACTGCAACTTTG 59.511 33.333 0.00 0.00 0.00 2.77
3240 3319 7.648908 TGTCACTGCAACTTTGAATAAATTCAG 59.351 33.333 5.60 0.00 46.34 3.02
3256 3335 8.814038 ATAAATTCAGTTTGAACTATGAGCCT 57.186 30.769 0.00 0.00 39.45 4.58
3257 3336 9.905713 ATAAATTCAGTTTGAACTATGAGCCTA 57.094 29.630 0.00 0.00 39.45 3.93
3258 3337 8.635765 AAATTCAGTTTGAACTATGAGCCTAA 57.364 30.769 0.00 0.00 39.45 2.69
3259 3338 8.814038 AATTCAGTTTGAACTATGAGCCTAAT 57.186 30.769 0.00 0.00 39.45 1.73
3260 3339 8.814038 ATTCAGTTTGAACTATGAGCCTAATT 57.186 30.769 0.00 0.00 39.45 1.40
3261 3340 7.615582 TCAGTTTGAACTATGAGCCTAATTG 57.384 36.000 0.00 0.00 37.08 2.32
3262 3341 6.599244 TCAGTTTGAACTATGAGCCTAATTGG 59.401 38.462 0.00 0.00 37.08 3.16
3263 3342 6.375455 CAGTTTGAACTATGAGCCTAATTGGT 59.625 38.462 0.00 0.00 37.08 3.67
3264 3343 6.948309 AGTTTGAACTATGAGCCTAATTGGTT 59.052 34.615 0.00 0.00 37.52 3.67
3265 3344 7.451566 AGTTTGAACTATGAGCCTAATTGGTTT 59.548 33.333 0.00 0.00 37.52 3.27
3266 3345 6.757897 TGAACTATGAGCCTAATTGGTTTG 57.242 37.500 0.00 0.00 38.35 2.93
3267 3346 5.652014 TGAACTATGAGCCTAATTGGTTTGG 59.348 40.000 0.00 0.00 38.35 3.28
3268 3347 5.193099 ACTATGAGCCTAATTGGTTTGGT 57.807 39.130 0.00 0.00 38.35 3.67
3269 3348 4.949856 ACTATGAGCCTAATTGGTTTGGTG 59.050 41.667 0.00 0.00 38.35 4.17
3270 3349 1.892474 TGAGCCTAATTGGTTTGGTGC 59.108 47.619 0.00 0.00 38.35 5.01
3271 3350 1.204704 GAGCCTAATTGGTTTGGTGCC 59.795 52.381 0.00 0.00 38.35 5.01
3272 3351 0.972883 GCCTAATTGGTTTGGTGCCA 59.027 50.000 0.00 0.00 38.35 4.92
3326 3405 4.890158 AAAAATGGTTGGTTCCCATCTC 57.110 40.909 0.00 0.00 41.87 2.75
3327 3406 3.833559 AAATGGTTGGTTCCCATCTCT 57.166 42.857 0.00 0.00 41.87 3.10
3328 3407 3.372440 AATGGTTGGTTCCCATCTCTC 57.628 47.619 0.00 0.00 41.87 3.20
3329 3408 1.741028 TGGTTGGTTCCCATCTCTCA 58.259 50.000 0.00 0.00 31.53 3.27
3330 3409 2.061848 TGGTTGGTTCCCATCTCTCAA 58.938 47.619 0.00 0.00 31.53 3.02
3331 3410 2.445145 TGGTTGGTTCCCATCTCTCAAA 59.555 45.455 0.00 0.00 31.53 2.69
3332 3411 3.117322 TGGTTGGTTCCCATCTCTCAAAA 60.117 43.478 0.00 0.00 31.53 2.44
3333 3412 3.895041 GGTTGGTTCCCATCTCTCAAAAA 59.105 43.478 0.00 0.00 31.53 1.94
3334 3413 4.528206 GGTTGGTTCCCATCTCTCAAAAAT 59.472 41.667 0.00 0.00 31.53 1.82
3335 3414 5.012046 GGTTGGTTCCCATCTCTCAAAAATT 59.988 40.000 0.00 0.00 31.53 1.82
3336 3415 5.726980 TGGTTCCCATCTCTCAAAAATTG 57.273 39.130 0.00 0.00 0.00 2.32
3337 3416 4.021192 TGGTTCCCATCTCTCAAAAATTGC 60.021 41.667 0.00 0.00 0.00 3.56
3338 3417 4.498241 GTTCCCATCTCTCAAAAATTGCC 58.502 43.478 0.00 0.00 0.00 4.52
3339 3418 3.777087 TCCCATCTCTCAAAAATTGCCA 58.223 40.909 0.00 0.00 0.00 4.92
3340 3419 4.158786 TCCCATCTCTCAAAAATTGCCAA 58.841 39.130 0.00 0.00 0.00 4.52
3341 3420 4.778958 TCCCATCTCTCAAAAATTGCCAAT 59.221 37.500 0.00 0.00 0.00 3.16
3342 3421 5.248934 TCCCATCTCTCAAAAATTGCCAATT 59.751 36.000 0.00 0.00 0.00 2.32
3343 3422 5.941647 CCCATCTCTCAAAAATTGCCAATTT 59.058 36.000 9.57 9.57 42.62 1.82
3362 3441 7.896894 CCAATTTTTGGCAATTTTCTGTTTTG 58.103 30.769 0.00 0.00 45.17 2.44
3363 3442 7.392556 CAATTTTTGGCAATTTTCTGTTTTGC 58.607 30.769 0.00 0.00 43.83 3.68
3370 3449 5.580661 GCAATTTTCTGTTTTGCCAAATGT 58.419 33.333 0.00 0.00 39.80 2.71
3371 3450 6.035217 GCAATTTTCTGTTTTGCCAAATGTT 58.965 32.000 0.00 0.00 39.80 2.71
3372 3451 6.020520 GCAATTTTCTGTTTTGCCAAATGTTG 60.021 34.615 0.00 0.00 39.80 3.33
3381 3460 3.702147 CCAAATGTTGGCTTGCCAA 57.298 47.368 21.59 21.59 45.17 4.52
3382 3461 1.964552 CCAAATGTTGGCTTGCCAAA 58.035 45.000 26.12 17.09 45.17 3.28
3383 3462 2.506444 CCAAATGTTGGCTTGCCAAAT 58.494 42.857 26.12 18.32 45.17 2.32
3384 3463 3.672808 CCAAATGTTGGCTTGCCAAATA 58.327 40.909 26.12 18.73 45.17 1.40
3385 3464 4.263435 CCAAATGTTGGCTTGCCAAATAT 58.737 39.130 26.12 19.92 45.17 1.28
3386 3465 4.701171 CCAAATGTTGGCTTGCCAAATATT 59.299 37.500 26.12 23.52 45.17 1.28
3387 3466 5.392165 CCAAATGTTGGCTTGCCAAATATTG 60.392 40.000 26.12 25.13 45.17 1.90
3414 3493 2.295885 CCAAATTTTGGCAGCAAACCA 58.704 42.857 14.96 0.00 45.17 3.67
3415 3494 2.686915 CCAAATTTTGGCAGCAAACCAA 59.313 40.909 14.96 1.35 45.17 3.67
3416 3495 3.318557 CCAAATTTTGGCAGCAAACCAAT 59.681 39.130 14.96 0.00 46.25 3.16
3417 3496 4.202131 CCAAATTTTGGCAGCAAACCAATT 60.202 37.500 14.96 0.00 46.25 2.32
3418 3497 5.009410 CCAAATTTTGGCAGCAAACCAATTA 59.991 36.000 14.96 0.00 46.25 1.40
3419 3498 5.945466 AATTTTGGCAGCAAACCAATTAG 57.055 34.783 6.01 0.00 46.25 1.73
3420 3499 2.453983 TTGGCAGCAAACCAATTAGC 57.546 45.000 0.00 0.00 42.23 3.09
3421 3500 0.607620 TGGCAGCAAACCAATTAGCC 59.392 50.000 0.00 0.00 40.93 3.93
3422 3501 0.897621 GGCAGCAAACCAATTAGCCT 59.102 50.000 0.00 0.00 37.67 4.58
3423 3502 1.134995 GGCAGCAAACCAATTAGCCTC 60.135 52.381 0.00 0.00 37.67 4.70
3424 3503 1.821136 GCAGCAAACCAATTAGCCTCT 59.179 47.619 0.00 0.00 0.00 3.69
3425 3504 3.016736 GCAGCAAACCAATTAGCCTCTA 58.983 45.455 0.00 0.00 0.00 2.43
3426 3505 3.181496 GCAGCAAACCAATTAGCCTCTAC 60.181 47.826 0.00 0.00 0.00 2.59
3427 3506 3.063997 CAGCAAACCAATTAGCCTCTACG 59.936 47.826 0.00 0.00 0.00 3.51
3428 3507 3.055385 AGCAAACCAATTAGCCTCTACGA 60.055 43.478 0.00 0.00 0.00 3.43
3429 3508 3.687698 GCAAACCAATTAGCCTCTACGAA 59.312 43.478 0.00 0.00 0.00 3.85
3430 3509 4.155280 GCAAACCAATTAGCCTCTACGAAA 59.845 41.667 0.00 0.00 0.00 3.46
3431 3510 5.628134 CAAACCAATTAGCCTCTACGAAAC 58.372 41.667 0.00 0.00 0.00 2.78
3432 3511 4.820894 ACCAATTAGCCTCTACGAAACT 57.179 40.909 0.00 0.00 0.00 2.66
3433 3512 5.161943 ACCAATTAGCCTCTACGAAACTT 57.838 39.130 0.00 0.00 0.00 2.66
3434 3513 5.176592 ACCAATTAGCCTCTACGAAACTTC 58.823 41.667 0.00 0.00 0.00 3.01
3439 3518 2.897969 AGCCTCTACGAAACTTCTTCCA 59.102 45.455 0.00 0.00 0.00 3.53
3526 3605 7.888424 TGATCTTCTGATTTCATTTTGCTCAA 58.112 30.769 0.00 0.00 32.19 3.02
3532 3611 7.211573 TCTGATTTCATTTTGCTCAAACATGT 58.788 30.769 0.00 0.00 0.00 3.21
3533 3612 7.711772 TCTGATTTCATTTTGCTCAAACATGTT 59.288 29.630 4.92 4.92 0.00 2.71
3640 3719 9.352191 GAGATTCTAGGAAGGTACAGTATTGTA 57.648 37.037 0.00 0.00 38.76 2.41
3651 3730 8.203681 AGGTACAGTATTGTAACCTTTCTTCT 57.796 34.615 9.62 0.00 46.58 2.85
3654 3733 9.708092 GTACAGTATTGTAACCTTTCTTCTTCT 57.292 33.333 0.00 0.00 41.25 2.85
3667 3746 8.947115 ACCTTTCTTCTTCTATTGTAAAATCCG 58.053 33.333 0.00 0.00 0.00 4.18
3668 3747 8.947115 CCTTTCTTCTTCTATTGTAAAATCCGT 58.053 33.333 0.00 0.00 0.00 4.69
3669 3748 9.760660 CTTTCTTCTTCTATTGTAAAATCCGTG 57.239 33.333 0.00 0.00 0.00 4.94
3670 3749 9.496873 TTTCTTCTTCTATTGTAAAATCCGTGA 57.503 29.630 0.00 0.00 0.00 4.35
3672 3751 9.314321 TCTTCTTCTATTGTAAAATCCGTGATC 57.686 33.333 0.00 0.00 0.00 2.92
3707 3789 6.627395 TTGGAAAGTTTGTCATCGTTGTAT 57.373 33.333 0.00 0.00 0.00 2.29
3755 3837 0.391597 TGTGTTCCCAGGTCGAAGTC 59.608 55.000 0.00 0.00 0.00 3.01
3776 3858 5.785940 AGTCAAGGGAGTTGTTCTTATAGGT 59.214 40.000 0.00 0.00 37.43 3.08
3911 3993 1.359848 ATCGACGAGCATGGTTTGAC 58.640 50.000 3.01 0.00 0.00 3.18
3953 4035 9.003658 ACAGATGTTCTTAATCTTTACAAGGTG 57.996 33.333 0.00 0.00 31.92 4.00
3977 4059 8.479280 GTGAACACTTGCATTAGTTTACATTTG 58.521 33.333 12.50 0.00 32.68 2.32
4007 4089 3.486383 TCTGTCATGAAAGTCAAACCCC 58.514 45.455 12.74 0.00 0.00 4.95
4014 4204 4.746535 TGAAAGTCAAACCCCCTTTTTC 57.253 40.909 0.00 0.00 0.00 2.29
4027 4217 1.403249 CCTTTTTCCCATTCTGCGCAG 60.403 52.381 31.53 31.53 0.00 5.18
4030 4220 1.382522 TTTCCCATTCTGCGCAGATC 58.617 50.000 38.40 0.00 37.29 2.75
4042 4232 6.392625 TCTGCGCAGATCTAACTATTAACT 57.607 37.500 35.30 0.00 31.41 2.24
4044 4237 6.039382 TCTGCGCAGATCTAACTATTAACTGA 59.961 38.462 35.30 7.63 31.41 3.41
4073 4266 1.206371 GCTTTTGCATTCAGGCTCCAT 59.794 47.619 0.00 0.00 46.58 3.41
4093 4286 2.623418 TATATGTCGAGGGCTGGGAT 57.377 50.000 0.00 0.00 0.00 3.85
4132 4325 1.886542 GGCCGTCTTTCATTTTCCACT 59.113 47.619 0.00 0.00 0.00 4.00
4163 4356 5.705441 TCATCAAAAAGAGCAACGGAACTAT 59.295 36.000 0.00 0.00 0.00 2.12
4282 4475 9.673454 CTTGTAAATTCTGTAAGTTGTTTACCC 57.327 33.333 0.00 0.00 40.80 3.69
4283 4476 8.168790 TGTAAATTCTGTAAGTTGTTTACCCC 57.831 34.615 0.00 0.00 40.80 4.95
4284 4477 6.659745 AAATTCTGTAAGTTGTTTACCCCC 57.340 37.500 0.00 0.00 40.80 5.40
4307 4500 2.936919 TGTCCACTTCATCTTGTGCT 57.063 45.000 0.00 0.00 33.26 4.40
4333 4526 7.147828 TGTCAGAGTGGTCTATATTTCTTCCAG 60.148 40.741 0.00 0.00 0.00 3.86
4338 4531 9.699703 GAGTGGTCTATATTTCTTCCAGAATAC 57.300 37.037 0.00 0.00 33.67 1.89
4340 4533 9.482627 GTGGTCTATATTTCTTCCAGAATACAG 57.517 37.037 0.00 0.00 33.67 2.74
4341 4534 9.213777 TGGTCTATATTTCTTCCAGAATACAGT 57.786 33.333 0.00 0.00 33.67 3.55
4356 4549 9.725019 CCAGAATACAGTATATAAATTCTGCCA 57.275 33.333 20.28 5.07 46.25 4.92
4480 4676 2.511659 TGCATTGCTCTCAGCTCTTTT 58.488 42.857 10.49 0.00 42.97 2.27
4484 4680 2.936919 TGCTCTCAGCTCTTTTTCCA 57.063 45.000 0.00 0.00 42.97 3.53
4551 4747 3.439857 AGCATACACATGTCCACCTTT 57.560 42.857 0.00 0.00 34.40 3.11
4574 4770 6.089249 TCCTTTTGAATTTTGCTCTCTTCC 57.911 37.500 0.00 0.00 0.00 3.46
4619 4815 0.718343 CTCTAGCTGTTGCGAGTTGC 59.282 55.000 0.00 0.00 45.42 4.17
4626 4822 1.265095 CTGTTGCGAGTTGCTGTGATT 59.735 47.619 3.50 0.00 46.63 2.57
4869 5066 4.216257 ACAGATACCTGAACAACAATGTGC 59.784 41.667 0.00 0.00 43.02 4.57
4922 5119 2.688507 TGCGTTTAGAAGCCTTCTCAG 58.311 47.619 10.91 2.44 41.14 3.35
4946 5144 8.111836 CAGTTGTGTGACATTTTGAGAATTTTG 58.888 33.333 0.00 0.00 0.00 2.44
4949 5147 4.744137 TGTGACATTTTGAGAATTTTGCGG 59.256 37.500 0.00 0.00 0.00 5.69
5282 5480 1.944032 ACACGTGTGACCTTTACACC 58.056 50.000 22.71 0.00 44.18 4.16
5296 5494 2.226962 TACACCAGTACTCCCTCCAC 57.773 55.000 0.00 0.00 0.00 4.02
5297 5495 0.190069 ACACCAGTACTCCCTCCACA 59.810 55.000 0.00 0.00 0.00 4.17
5299 5497 1.697432 CACCAGTACTCCCTCCACAAA 59.303 52.381 0.00 0.00 0.00 2.83
5300 5498 1.697982 ACCAGTACTCCCTCCACAAAC 59.302 52.381 0.00 0.00 0.00 2.93
5301 5499 1.978580 CCAGTACTCCCTCCACAAACT 59.021 52.381 0.00 0.00 0.00 2.66
5302 5500 3.170717 CCAGTACTCCCTCCACAAACTA 58.829 50.000 0.00 0.00 0.00 2.24
5303 5501 3.056035 CCAGTACTCCCTCCACAAACTAC 60.056 52.174 0.00 0.00 0.00 2.73
5304 5502 3.833070 CAGTACTCCCTCCACAAACTACT 59.167 47.826 0.00 0.00 0.00 2.57
5305 5503 5.014858 CAGTACTCCCTCCACAAACTACTA 58.985 45.833 0.00 0.00 0.00 1.82
5306 5504 5.015515 AGTACTCCCTCCACAAACTACTAC 58.984 45.833 0.00 0.00 0.00 2.73
5307 5505 4.129317 ACTCCCTCCACAAACTACTACT 57.871 45.455 0.00 0.00 0.00 2.57
5308 5506 4.087907 ACTCCCTCCACAAACTACTACTC 58.912 47.826 0.00 0.00 0.00 2.59
5309 5507 3.087031 TCCCTCCACAAACTACTACTCG 58.913 50.000 0.00 0.00 0.00 4.18
5310 5508 2.416972 CCCTCCACAAACTACTACTCGC 60.417 54.545 0.00 0.00 0.00 5.03
5311 5509 2.492484 CCTCCACAAACTACTACTCGCT 59.508 50.000 0.00 0.00 0.00 4.93
5312 5510 3.427773 CCTCCACAAACTACTACTCGCTC 60.428 52.174 0.00 0.00 0.00 5.03
5313 5511 2.490903 TCCACAAACTACTACTCGCTCC 59.509 50.000 0.00 0.00 0.00 4.70
5314 5512 2.516923 CACAAACTACTACTCGCTCCG 58.483 52.381 0.00 0.00 0.00 4.63
5315 5513 2.095364 CACAAACTACTACTCGCTCCGT 60.095 50.000 0.00 0.00 0.00 4.69
5316 5514 2.161211 ACAAACTACTACTCGCTCCGTC 59.839 50.000 0.00 0.00 0.00 4.79
5317 5515 1.377536 AACTACTACTCGCTCCGTCC 58.622 55.000 0.00 0.00 0.00 4.79
5318 5516 0.463474 ACTACTACTCGCTCCGTCCC 60.463 60.000 0.00 0.00 0.00 4.46
5319 5517 0.463295 CTACTACTCGCTCCGTCCCA 60.463 60.000 0.00 0.00 0.00 4.37
5320 5518 0.035152 TACTACTCGCTCCGTCCCAA 60.035 55.000 0.00 0.00 0.00 4.12
5321 5519 0.896940 ACTACTCGCTCCGTCCCAAA 60.897 55.000 0.00 0.00 0.00 3.28
5322 5520 0.179134 CTACTCGCTCCGTCCCAAAG 60.179 60.000 0.00 0.00 0.00 2.77
5323 5521 0.896940 TACTCGCTCCGTCCCAAAGT 60.897 55.000 0.00 0.00 0.00 2.66
5324 5522 1.738099 CTCGCTCCGTCCCAAAGTG 60.738 63.158 0.00 0.00 0.00 3.16
5325 5523 2.030562 CGCTCCGTCCCAAAGTGT 59.969 61.111 0.00 0.00 0.00 3.55
5326 5524 2.027625 CGCTCCGTCCCAAAGTGTC 61.028 63.158 0.00 0.00 0.00 3.67
5327 5525 1.371558 GCTCCGTCCCAAAGTGTCT 59.628 57.895 0.00 0.00 0.00 3.41
5328 5526 0.670854 GCTCCGTCCCAAAGTGTCTC 60.671 60.000 0.00 0.00 0.00 3.36
5329 5527 0.679505 CTCCGTCCCAAAGTGTCTCA 59.320 55.000 0.00 0.00 0.00 3.27
5330 5528 1.070134 CTCCGTCCCAAAGTGTCTCAA 59.930 52.381 0.00 0.00 0.00 3.02
5331 5529 1.202604 TCCGTCCCAAAGTGTCTCAAC 60.203 52.381 0.00 0.00 0.00 3.18
5332 5530 1.202651 CCGTCCCAAAGTGTCTCAACT 60.203 52.381 0.00 0.00 0.00 3.16
5333 5531 2.561569 CGTCCCAAAGTGTCTCAACTT 58.438 47.619 0.00 0.00 42.21 2.66
5344 5542 7.659652 AAGTGTCTCAACTTTGTATTAGCTC 57.340 36.000 0.00 0.00 37.05 4.09
5345 5543 6.998802 AGTGTCTCAACTTTGTATTAGCTCT 58.001 36.000 0.00 0.00 0.00 4.09
5346 5544 8.123639 AGTGTCTCAACTTTGTATTAGCTCTA 57.876 34.615 0.00 0.00 0.00 2.43
5347 5545 8.247562 AGTGTCTCAACTTTGTATTAGCTCTAG 58.752 37.037 0.00 0.00 0.00 2.43
5348 5546 8.030106 GTGTCTCAACTTTGTATTAGCTCTAGT 58.970 37.037 0.00 0.00 0.00 2.57
5349 5547 9.239551 TGTCTCAACTTTGTATTAGCTCTAGTA 57.760 33.333 0.00 0.00 0.00 1.82
5350 5548 9.505995 GTCTCAACTTTGTATTAGCTCTAGTAC 57.494 37.037 0.00 3.50 0.00 2.73
5351 5549 9.239551 TCTCAACTTTGTATTAGCTCTAGTACA 57.760 33.333 7.81 7.81 36.76 2.90
5352 5550 9.856488 CTCAACTTTGTATTAGCTCTAGTACAA 57.144 33.333 16.17 16.17 42.51 2.41
5372 5570 9.819267 AGTACAAATTTATACTAAGCTCCAGAC 57.181 33.333 7.37 0.00 29.70 3.51
5373 5571 9.595823 GTACAAATTTATACTAAGCTCCAGACA 57.404 33.333 0.00 0.00 0.00 3.41
5374 5572 8.494016 ACAAATTTATACTAAGCTCCAGACAC 57.506 34.615 2.46 0.00 0.00 3.67
5375 5573 8.322091 ACAAATTTATACTAAGCTCCAGACACT 58.678 33.333 2.46 0.00 0.00 3.55
5376 5574 9.167311 CAAATTTATACTAAGCTCCAGACACTT 57.833 33.333 2.46 0.00 0.00 3.16
5382 5580 8.723942 ATACTAAGCTCCAGACACTTATTTTG 57.276 34.615 2.46 0.00 0.00 2.44
5383 5581 5.940470 ACTAAGCTCCAGACACTTATTTTGG 59.060 40.000 2.46 0.00 0.00 3.28
5384 5582 3.690460 AGCTCCAGACACTTATTTTGGG 58.310 45.455 0.00 0.00 0.00 4.12
5385 5583 3.330701 AGCTCCAGACACTTATTTTGGGA 59.669 43.478 0.00 0.00 0.00 4.37
5386 5584 3.440522 GCTCCAGACACTTATTTTGGGAC 59.559 47.826 0.00 0.00 0.00 4.46
5387 5585 3.670625 TCCAGACACTTATTTTGGGACG 58.329 45.455 0.00 0.00 0.00 4.79
5388 5586 2.747446 CCAGACACTTATTTTGGGACGG 59.253 50.000 0.00 0.00 0.00 4.79
5389 5587 3.558321 CCAGACACTTATTTTGGGACGGA 60.558 47.826 0.00 0.00 0.00 4.69
5390 5588 3.684788 CAGACACTTATTTTGGGACGGAG 59.315 47.826 0.00 0.00 0.00 4.63
5391 5589 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
5392 5590 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
5393 5591 1.283905 ACTTATTTTGGGACGGAGGGG 59.716 52.381 0.00 0.00 0.00 4.79
5394 5592 0.626916 TTATTTTGGGACGGAGGGGG 59.373 55.000 0.00 0.00 0.00 5.40
5395 5593 0.550638 TATTTTGGGACGGAGGGGGT 60.551 55.000 0.00 0.00 0.00 4.95
5400 5598 1.152589 GGGACGGAGGGGGTACTAG 60.153 68.421 0.00 0.00 0.00 2.57
5406 5604 4.447762 GGACGGAGGGGGTACTAGTATAAA 60.448 50.000 5.75 0.00 0.00 1.40
5411 5609 6.462067 CGGAGGGGGTACTAGTATAAACTTTG 60.462 46.154 5.75 0.00 37.15 2.77
5508 5708 7.148323 ACCACTGCCTTTGAACAAAAATAAAAC 60.148 33.333 1.76 0.00 0.00 2.43
5511 5711 7.332182 ACTGCCTTTGAACAAAAATAAAACGAA 59.668 29.630 0.00 0.00 0.00 3.85
5526 5726 8.434870 AATAAAACGAACATCAACAATTCTCG 57.565 30.769 0.00 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.122519 GGTTGAATGTTGTGGTGGATTTTT 58.877 37.500 0.00 0.00 0.00 1.94
24 25 4.163078 TGGTTGAATGTTGTGGTGGATTTT 59.837 37.500 0.00 0.00 0.00 1.82
25 26 3.708631 TGGTTGAATGTTGTGGTGGATTT 59.291 39.130 0.00 0.00 0.00 2.17
26 27 3.303938 TGGTTGAATGTTGTGGTGGATT 58.696 40.909 0.00 0.00 0.00 3.01
27 28 2.956132 TGGTTGAATGTTGTGGTGGAT 58.044 42.857 0.00 0.00 0.00 3.41
28 29 2.443958 TGGTTGAATGTTGTGGTGGA 57.556 45.000 0.00 0.00 0.00 4.02
29 30 2.867251 GCATGGTTGAATGTTGTGGTGG 60.867 50.000 0.00 0.00 0.00 4.61
30 31 2.223994 TGCATGGTTGAATGTTGTGGTG 60.224 45.455 0.00 0.00 0.00 4.17
31 32 2.037901 TGCATGGTTGAATGTTGTGGT 58.962 42.857 0.00 0.00 0.00 4.16
32 33 2.816204 TGCATGGTTGAATGTTGTGG 57.184 45.000 0.00 0.00 0.00 4.17
33 34 3.915536 TCATGCATGGTTGAATGTTGTG 58.084 40.909 25.97 0.00 39.59 3.33
34 35 3.827876 TCTCATGCATGGTTGAATGTTGT 59.172 39.130 25.97 0.00 39.59 3.32
35 36 4.443913 TCTCATGCATGGTTGAATGTTG 57.556 40.909 25.97 0.00 39.59 3.33
36 37 5.471556 TTTCTCATGCATGGTTGAATGTT 57.528 34.783 25.97 0.00 39.59 2.71
37 38 5.471556 TTTTCTCATGCATGGTTGAATGT 57.528 34.783 25.97 0.00 39.59 2.71
38 39 5.872617 ACATTTTCTCATGCATGGTTGAATG 59.127 36.000 25.97 26.40 39.92 2.67
39 40 6.045072 ACATTTTCTCATGCATGGTTGAAT 57.955 33.333 25.97 17.14 0.00 2.57
40 41 5.244402 AGACATTTTCTCATGCATGGTTGAA 59.756 36.000 25.97 21.90 0.00 2.69
41 42 4.768448 AGACATTTTCTCATGCATGGTTGA 59.232 37.500 25.97 17.89 0.00 3.18
42 43 5.068234 AGACATTTTCTCATGCATGGTTG 57.932 39.130 25.97 16.03 0.00 3.77
43 44 5.244402 TGAAGACATTTTCTCATGCATGGTT 59.756 36.000 25.97 5.24 31.02 3.67
44 45 4.768448 TGAAGACATTTTCTCATGCATGGT 59.232 37.500 25.97 13.94 31.02 3.55
45 46 5.319140 TGAAGACATTTTCTCATGCATGG 57.681 39.130 25.97 16.47 31.02 3.66
46 47 5.977725 GGATGAAGACATTTTCTCATGCATG 59.022 40.000 21.07 21.07 36.82 4.06
47 48 5.655090 TGGATGAAGACATTTTCTCATGCAT 59.345 36.000 0.00 0.00 36.36 3.96
48 49 5.011586 TGGATGAAGACATTTTCTCATGCA 58.988 37.500 1.58 1.58 37.61 3.96
49 50 5.571784 TGGATGAAGACATTTTCTCATGC 57.428 39.130 0.00 0.00 36.82 4.06
179 180 8.587608 ACATGAGAACCAAAATTGAACATACAT 58.412 29.630 0.00 0.00 0.00 2.29
180 181 7.950512 ACATGAGAACCAAAATTGAACATACA 58.049 30.769 0.00 0.00 0.00 2.29
181 182 8.816640 AACATGAGAACCAAAATTGAACATAC 57.183 30.769 0.00 0.00 0.00 2.39
183 184 9.426837 CATAACATGAGAACCAAAATTGAACAT 57.573 29.630 0.00 0.00 0.00 2.71
184 185 8.637099 TCATAACATGAGAACCAAAATTGAACA 58.363 29.630 0.00 0.00 33.59 3.18
208 209 9.912634 GAATTGGTTGATGAAAATTTAGACTCA 57.087 29.630 0.00 0.00 0.00 3.41
211 212 9.912634 TGAGAATTGGTTGATGAAAATTTAGAC 57.087 29.630 0.00 0.00 0.00 2.59
212 213 9.912634 GTGAGAATTGGTTGATGAAAATTTAGA 57.087 29.630 0.00 0.00 0.00 2.10
213 214 9.695526 TGTGAGAATTGGTTGATGAAAATTTAG 57.304 29.630 0.00 0.00 0.00 1.85
214 215 9.474920 GTGTGAGAATTGGTTGATGAAAATTTA 57.525 29.630 0.00 0.00 0.00 1.40
215 216 7.442062 GGTGTGAGAATTGGTTGATGAAAATTT 59.558 33.333 0.00 0.00 0.00 1.82
216 217 6.930722 GGTGTGAGAATTGGTTGATGAAAATT 59.069 34.615 0.00 0.00 0.00 1.82
217 218 6.041865 TGGTGTGAGAATTGGTTGATGAAAAT 59.958 34.615 0.00 0.00 0.00 1.82
218 219 5.362143 TGGTGTGAGAATTGGTTGATGAAAA 59.638 36.000 0.00 0.00 0.00 2.29
219 220 4.892345 TGGTGTGAGAATTGGTTGATGAAA 59.108 37.500 0.00 0.00 0.00 2.69
220 221 4.468713 TGGTGTGAGAATTGGTTGATGAA 58.531 39.130 0.00 0.00 0.00 2.57
221 222 4.097551 TGGTGTGAGAATTGGTTGATGA 57.902 40.909 0.00 0.00 0.00 2.92
222 223 4.549458 GTTGGTGTGAGAATTGGTTGATG 58.451 43.478 0.00 0.00 0.00 3.07
223 224 3.573967 GGTTGGTGTGAGAATTGGTTGAT 59.426 43.478 0.00 0.00 0.00 2.57
224 225 2.955660 GGTTGGTGTGAGAATTGGTTGA 59.044 45.455 0.00 0.00 0.00 3.18
225 226 2.035832 GGGTTGGTGTGAGAATTGGTTG 59.964 50.000 0.00 0.00 0.00 3.77
226 227 2.316108 GGGTTGGTGTGAGAATTGGTT 58.684 47.619 0.00 0.00 0.00 3.67
227 228 1.216678 TGGGTTGGTGTGAGAATTGGT 59.783 47.619 0.00 0.00 0.00 3.67
228 229 1.993956 TGGGTTGGTGTGAGAATTGG 58.006 50.000 0.00 0.00 0.00 3.16
229 230 3.156293 TCATGGGTTGGTGTGAGAATTG 58.844 45.455 0.00 0.00 0.00 2.32
230 231 3.181429 ACTCATGGGTTGGTGTGAGAATT 60.181 43.478 8.09 0.00 40.30 2.17
231 232 2.376518 ACTCATGGGTTGGTGTGAGAAT 59.623 45.455 8.09 0.00 40.30 2.40
232 233 1.774254 ACTCATGGGTTGGTGTGAGAA 59.226 47.619 8.09 0.00 40.30 2.87
233 234 1.434188 ACTCATGGGTTGGTGTGAGA 58.566 50.000 8.09 0.00 40.30 3.27
234 235 2.276732 AACTCATGGGTTGGTGTGAG 57.723 50.000 10.99 0.00 42.80 3.51
235 236 5.506730 TTATAACTCATGGGTTGGTGTGA 57.493 39.130 21.51 0.00 0.00 3.58
236 237 6.122277 AGATTATAACTCATGGGTTGGTGTG 58.878 40.000 21.51 0.00 0.00 3.82
237 238 6.327386 AGATTATAACTCATGGGTTGGTGT 57.673 37.500 21.51 4.66 0.00 4.16
238 239 7.993183 ACTAAGATTATAACTCATGGGTTGGTG 59.007 37.037 21.51 3.68 0.00 4.17
239 240 8.102484 ACTAAGATTATAACTCATGGGTTGGT 57.898 34.615 21.51 11.80 0.00 3.67
240 241 9.490379 GTACTAAGATTATAACTCATGGGTTGG 57.510 37.037 21.51 0.00 0.00 3.77
243 244 9.209048 TGTGTACTAAGATTATAACTCATGGGT 57.791 33.333 0.00 0.00 0.00 4.51
244 245 9.477484 GTGTGTACTAAGATTATAACTCATGGG 57.523 37.037 0.00 0.00 0.00 4.00
257 258 9.871238 CTAGGTAAACAATGTGTGTACTAAGAT 57.129 33.333 8.28 0.00 40.18 2.40
258 259 7.816031 GCTAGGTAAACAATGTGTGTACTAAGA 59.184 37.037 8.28 0.00 40.18 2.10
259 260 7.201410 CGCTAGGTAAACAATGTGTGTACTAAG 60.201 40.741 8.28 7.29 40.18 2.18
260 261 6.587226 CGCTAGGTAAACAATGTGTGTACTAA 59.413 38.462 8.28 0.00 40.18 2.24
261 262 6.094719 CGCTAGGTAAACAATGTGTGTACTA 58.905 40.000 8.28 0.56 40.18 1.82
262 263 4.927425 CGCTAGGTAAACAATGTGTGTACT 59.073 41.667 8.28 0.00 40.18 2.73
263 264 4.435121 GCGCTAGGTAAACAATGTGTGTAC 60.435 45.833 0.00 0.80 40.60 2.90
264 265 3.680937 GCGCTAGGTAAACAATGTGTGTA 59.319 43.478 0.00 0.00 40.60 2.90
265 266 2.482721 GCGCTAGGTAAACAATGTGTGT 59.517 45.455 0.00 0.00 44.64 3.72
266 267 2.473868 CGCGCTAGGTAAACAATGTGTG 60.474 50.000 5.56 0.00 0.00 3.82
267 268 1.730064 CGCGCTAGGTAAACAATGTGT 59.270 47.619 5.56 0.00 0.00 3.72
268 269 1.062002 CCGCGCTAGGTAAACAATGTG 59.938 52.381 5.56 0.00 0.00 3.21
269 270 1.066716 TCCGCGCTAGGTAAACAATGT 60.067 47.619 5.56 0.00 0.00 2.71
270 271 1.326548 GTCCGCGCTAGGTAAACAATG 59.673 52.381 5.56 0.00 0.00 2.82
271 272 1.648504 GTCCGCGCTAGGTAAACAAT 58.351 50.000 5.56 0.00 0.00 2.71
272 273 0.390209 GGTCCGCGCTAGGTAAACAA 60.390 55.000 5.56 0.00 0.00 2.83
273 274 1.216178 GGTCCGCGCTAGGTAAACA 59.784 57.895 5.56 0.00 0.00 2.83
274 275 1.875364 CGGTCCGCGCTAGGTAAAC 60.875 63.158 5.56 0.00 0.00 2.01
275 276 1.386525 ATCGGTCCGCGCTAGGTAAA 61.387 55.000 6.34 0.00 0.00 2.01
276 277 1.386525 AATCGGTCCGCGCTAGGTAA 61.387 55.000 6.34 0.00 0.00 2.85
277 278 1.386525 AAATCGGTCCGCGCTAGGTA 61.387 55.000 6.34 0.00 0.00 3.08
278 279 2.234913 AAAATCGGTCCGCGCTAGGT 62.235 55.000 6.34 0.00 0.00 3.08
279 280 1.087771 AAAAATCGGTCCGCGCTAGG 61.088 55.000 6.34 0.00 0.00 3.02
280 281 0.300789 GAAAAATCGGTCCGCGCTAG 59.699 55.000 6.34 0.00 0.00 3.42
281 282 0.390078 TGAAAAATCGGTCCGCGCTA 60.390 50.000 6.34 0.00 0.00 4.26
282 283 1.635663 CTGAAAAATCGGTCCGCGCT 61.636 55.000 6.34 0.00 0.00 5.92
283 284 1.226018 CTGAAAAATCGGTCCGCGC 60.226 57.895 6.34 0.00 0.00 6.86
284 285 1.226018 GCTGAAAAATCGGTCCGCG 60.226 57.895 6.34 0.00 0.00 6.46
285 286 0.179189 CAGCTGAAAAATCGGTCCGC 60.179 55.000 8.42 0.00 0.00 5.54
286 287 1.156736 ACAGCTGAAAAATCGGTCCG 58.843 50.000 23.35 4.39 0.00 4.79
287 288 2.552315 TCAACAGCTGAAAAATCGGTCC 59.448 45.455 23.35 0.00 0.00 4.46
288 289 3.251004 AGTCAACAGCTGAAAAATCGGTC 59.749 43.478 23.35 0.00 35.22 4.79
289 290 3.214328 AGTCAACAGCTGAAAAATCGGT 58.786 40.909 23.35 0.00 35.22 4.69
290 291 3.904136 AGTCAACAGCTGAAAAATCGG 57.096 42.857 23.35 0.23 35.22 4.18
291 292 6.373779 ACATAAGTCAACAGCTGAAAAATCG 58.626 36.000 23.35 3.33 35.22 3.34
292 293 7.478667 CGTACATAAGTCAACAGCTGAAAAATC 59.521 37.037 23.35 5.56 35.22 2.17
293 294 7.172532 TCGTACATAAGTCAACAGCTGAAAAAT 59.827 33.333 23.35 4.35 35.22 1.82
294 295 6.480651 TCGTACATAAGTCAACAGCTGAAAAA 59.519 34.615 23.35 0.00 35.22 1.94
295 296 5.986741 TCGTACATAAGTCAACAGCTGAAAA 59.013 36.000 23.35 1.18 35.22 2.29
296 297 5.534407 TCGTACATAAGTCAACAGCTGAAA 58.466 37.500 23.35 1.59 35.22 2.69
297 298 5.128992 TCGTACATAAGTCAACAGCTGAA 57.871 39.130 23.35 2.00 35.22 3.02
298 299 4.776795 TCGTACATAAGTCAACAGCTGA 57.223 40.909 23.35 0.00 0.00 4.26
299 300 5.176774 TGTTTCGTACATAAGTCAACAGCTG 59.823 40.000 13.48 13.48 0.00 4.24
300 301 5.176958 GTGTTTCGTACATAAGTCAACAGCT 59.823 40.000 0.00 0.00 39.39 4.24
301 302 5.176958 AGTGTTTCGTACATAAGTCAACAGC 59.823 40.000 0.00 0.00 39.39 4.40
302 303 6.764877 AGTGTTTCGTACATAAGTCAACAG 57.235 37.500 0.00 0.00 39.39 3.16
303 304 8.821147 AATAGTGTTTCGTACATAAGTCAACA 57.179 30.769 0.00 0.00 39.39 3.33
306 307 9.478768 TGAAAATAGTGTTTCGTACATAAGTCA 57.521 29.630 0.00 0.00 39.85 3.41
307 308 9.737025 GTGAAAATAGTGTTTCGTACATAAGTC 57.263 33.333 0.00 0.00 39.85 3.01
312 313 7.389330 TCCATGTGAAAATAGTGTTTCGTACAT 59.611 33.333 0.00 0.00 39.85 2.29
313 314 6.706716 TCCATGTGAAAATAGTGTTTCGTACA 59.293 34.615 0.00 0.00 39.85 2.90
347 348 0.170561 GTGTCTACGATGACAGCCGT 59.829 55.000 13.55 9.99 46.09 5.68
377 378 9.330063 CATGAAGAGGAGCAAACAGTTTATATA 57.670 33.333 0.00 0.00 0.00 0.86
426 429 8.144478 TGAGAATACAGATAAATCAGTAGTGCC 58.856 37.037 1.01 0.00 33.27 5.01
434 438 9.809096 GACTCTTGTGAGAATACAGATAAATCA 57.191 33.333 0.00 0.00 42.73 2.57
446 450 3.996921 AGGCATGACTCTTGTGAGAAT 57.003 42.857 0.00 0.00 42.73 2.40
464 468 5.163457 TGCCTTGTCTTTTCTTGGTAAAAGG 60.163 40.000 8.70 0.00 43.56 3.11
582 588 4.024725 CGTGTTTCATTTTCCCTTCGTGTA 60.025 41.667 0.00 0.00 0.00 2.90
616 622 6.072342 AGCAAGTATAAGTTGGGTTTTTACCG 60.072 38.462 0.00 0.00 0.00 4.02
755 786 3.713764 AGAGAGAGAGAAGGAGAGGAGAG 59.286 52.174 0.00 0.00 0.00 3.20
858 891 3.129502 GGTTTAGGGTTCGGGCGC 61.130 66.667 0.00 0.00 0.00 6.53
990 1023 3.237741 GCCCCCATCTCTCTCCGG 61.238 72.222 0.00 0.00 0.00 5.14
1248 1281 2.528743 GGTGATGACGATGCAGCGG 61.529 63.158 29.52 10.79 35.12 5.52
1253 1286 1.594862 GCTTACAGGTGATGACGATGC 59.405 52.381 0.00 0.00 0.00 3.91
1255 1288 2.739932 GCAGCTTACAGGTGATGACGAT 60.740 50.000 7.13 0.00 45.98 3.73
1346 1379 1.800586 CAAACACGACCCAGACAGATG 59.199 52.381 0.00 0.00 0.00 2.90
1424 1457 6.438763 AGGACAAACGAAACTTCATTCATTC 58.561 36.000 0.00 0.00 0.00 2.67
1561 1595 1.540367 ATCGTCTCCCCCAACCCAA 60.540 57.895 0.00 0.00 0.00 4.12
1562 1596 2.124085 ATCGTCTCCCCCAACCCA 59.876 61.111 0.00 0.00 0.00 4.51
1563 1597 1.559065 TTCATCGTCTCCCCCAACCC 61.559 60.000 0.00 0.00 0.00 4.11
1564 1598 0.326927 TTTCATCGTCTCCCCCAACC 59.673 55.000 0.00 0.00 0.00 3.77
1565 1599 1.003233 AGTTTCATCGTCTCCCCCAAC 59.997 52.381 0.00 0.00 0.00 3.77
1605 1647 2.370281 AGAGTAACAGGCGACACATG 57.630 50.000 0.00 0.00 0.00 3.21
1607 1649 1.684450 TGAAGAGTAACAGGCGACACA 59.316 47.619 0.00 0.00 0.00 3.72
1680 1732 5.126869 TCCAATGTCTTTCAAGTTTCAAGCA 59.873 36.000 0.00 0.00 0.00 3.91
1702 1754 5.471116 ACTGTAACTGTACCGGAAATTTTCC 59.529 40.000 16.80 16.80 46.62 3.13
1711 1763 3.119708 GGTGTAGACTGTAACTGTACCGG 60.120 52.174 0.00 0.00 0.00 5.28
1741 1793 1.207329 AGCAGGTTAGTGGAATCCGAC 59.793 52.381 0.00 0.00 0.00 4.79
1744 1796 3.798202 CACTAGCAGGTTAGTGGAATCC 58.202 50.000 13.53 0.00 44.30 3.01
1778 1830 5.884232 AGAAGTATCACACACGAGGTATACA 59.116 40.000 5.01 0.00 0.00 2.29
1814 1866 2.751688 GTTCCAAGGTACGGGCCA 59.248 61.111 4.39 0.00 0.00 5.36
1891 1943 0.107312 CCCAATGTCCTGAGCTGGAG 60.107 60.000 0.00 0.00 36.69 3.86
1942 1994 6.216251 TCCCCATAGCATCTTCATATTTAGCT 59.784 38.462 0.00 0.00 34.84 3.32
1957 2009 1.152694 GCAGGCATTCCCCATAGCA 60.153 57.895 0.00 0.00 0.00 3.49
2093 2145 2.548057 TGCAGTGAGATTCAAACGAACC 59.452 45.455 0.00 0.00 0.00 3.62
2099 2151 3.187022 CGTCATGTGCAGTGAGATTCAAA 59.813 43.478 2.11 0.00 0.00 2.69
2126 2178 7.069455 GGGCCATAAATACCAAATAGAAACAGT 59.931 37.037 4.39 0.00 0.00 3.55
2135 2187 4.901250 CAGAAGGGGCCATAAATACCAAAT 59.099 41.667 4.39 0.00 0.00 2.32
2356 2415 4.273480 AGACATTTTGTAGTGCACAGTGAC 59.727 41.667 21.04 11.54 38.72 3.67
2364 2423 5.355071 TGATGGATCAGACATTTTGTAGTGC 59.645 40.000 0.00 0.00 32.11 4.40
2400 2459 1.377536 GAGACAATTCAGGAGCTGGC 58.622 55.000 0.00 0.00 31.51 4.85
2417 2476 5.821470 ACAGCATCATGATTAGTTTCTGGAG 59.179 40.000 5.16 0.00 0.00 3.86
2532 2591 4.191544 ACGATGTTTGGTGATACTGATGG 58.808 43.478 0.00 0.00 0.00 3.51
2677 2736 0.693049 AATTTCCCGTGCTCTCCAGT 59.307 50.000 0.00 0.00 0.00 4.00
2855 2914 1.602377 GCTCGTATGGGTTTGGCATAC 59.398 52.381 0.00 0.00 0.00 2.39
2857 2916 0.255890 AGCTCGTATGGGTTTGGCAT 59.744 50.000 0.00 0.00 0.00 4.40
2894 2953 7.893124 AGATTACGACCTAATCCAGTAAGAA 57.107 36.000 0.00 0.00 41.29 2.52
2901 2960 6.889301 ACGAATAGATTACGACCTAATCCA 57.111 37.500 0.00 0.00 41.29 3.41
2902 2961 7.414984 CCCTACGAATAGATTACGACCTAATCC 60.415 44.444 0.00 0.00 41.29 3.01
2951 3020 9.781633 TGTTGGTACTTGCTAGACTTTAATTAA 57.218 29.630 1.04 0.00 0.00 1.40
2978 3047 3.018149 TCTGCAACTTTTGGGTAAACGT 58.982 40.909 0.00 0.00 30.48 3.99
2980 3049 4.649088 ACTCTGCAACTTTTGGGTAAAC 57.351 40.909 0.00 0.00 0.00 2.01
3122 3201 7.884877 AGCATTCAGGCAATAGCACTTAATATA 59.115 33.333 0.00 0.00 44.61 0.86
3123 3202 6.718454 AGCATTCAGGCAATAGCACTTAATAT 59.282 34.615 0.00 0.00 44.61 1.28
3124 3203 6.064060 AGCATTCAGGCAATAGCACTTAATA 58.936 36.000 0.00 0.00 44.61 0.98
3125 3204 4.891756 AGCATTCAGGCAATAGCACTTAAT 59.108 37.500 0.00 0.00 44.61 1.40
3126 3205 4.272489 AGCATTCAGGCAATAGCACTTAA 58.728 39.130 0.00 0.00 44.61 1.85
3161 3240 9.979578 TTCTGAAGATAAAATATCTCTCTGAGC 57.020 33.333 0.00 0.00 0.00 4.26
3194 3273 8.902806 AGTGACAATAAAAACTCTCAATGACAA 58.097 29.630 0.00 0.00 0.00 3.18
3210 3289 9.979578 ATTTATTCAAAGTTGCAGTGACAATAA 57.020 25.926 0.00 0.00 0.00 1.40
3229 3308 9.508567 GGCTCATAGTTCAAACTGAATTTATTC 57.491 33.333 5.66 0.00 38.79 1.75
3240 3319 6.759497 ACCAATTAGGCTCATAGTTCAAAC 57.241 37.500 0.00 0.00 43.14 2.93
3250 3329 1.892474 GCACCAAACCAATTAGGCTCA 59.108 47.619 0.00 0.00 43.14 4.26
3251 3330 1.204704 GGCACCAAACCAATTAGGCTC 59.795 52.381 0.00 0.00 43.14 4.70
3252 3331 1.266178 GGCACCAAACCAATTAGGCT 58.734 50.000 0.00 0.00 43.14 4.58
3253 3332 0.972883 TGGCACCAAACCAATTAGGC 59.027 50.000 0.00 0.00 43.14 3.93
3260 3339 3.692257 CCAATTATTGGCACCAAACCA 57.308 42.857 11.33 0.00 45.17 3.67
3316 3395 4.021192 TGGCAATTTTTGAGAGATGGGAAC 60.021 41.667 0.00 0.00 0.00 3.62
3317 3396 4.158786 TGGCAATTTTTGAGAGATGGGAA 58.841 39.130 0.00 0.00 0.00 3.97
3318 3397 3.777087 TGGCAATTTTTGAGAGATGGGA 58.223 40.909 0.00 0.00 0.00 4.37
3319 3398 4.540359 TTGGCAATTTTTGAGAGATGGG 57.460 40.909 0.00 0.00 0.00 4.00
3320 3399 7.443259 AAAATTGGCAATTTTTGAGAGATGG 57.557 32.000 33.97 0.00 46.01 3.51
3338 3417 7.392556 GCAAAACAGAAAATTGCCAAAAATTG 58.607 30.769 0.00 0.00 42.70 2.32
3339 3418 7.522901 GCAAAACAGAAAATTGCCAAAAATT 57.477 28.000 0.00 0.00 42.70 1.82
3347 3426 5.580661 ACATTTGGCAAAACAGAAAATTGC 58.419 33.333 17.70 1.29 46.60 3.56
3348 3427 6.472808 CCAACATTTGGCAAAACAGAAAATTG 59.527 34.615 17.70 9.58 45.17 2.32
3349 3428 6.562518 CCAACATTTGGCAAAACAGAAAATT 58.437 32.000 17.70 0.00 45.17 1.82
3350 3429 6.134040 CCAACATTTGGCAAAACAGAAAAT 57.866 33.333 17.70 0.00 45.17 1.82
3351 3430 5.557891 CCAACATTTGGCAAAACAGAAAA 57.442 34.783 17.70 0.00 45.17 2.29
3402 3481 0.607620 GGCTAATTGGTTTGCTGCCA 59.392 50.000 0.00 0.00 38.79 4.92
3403 3482 0.897621 AGGCTAATTGGTTTGCTGCC 59.102 50.000 0.00 0.00 36.51 4.85
3404 3483 1.821136 AGAGGCTAATTGGTTTGCTGC 59.179 47.619 0.00 0.00 36.51 5.25
3405 3484 3.063997 CGTAGAGGCTAATTGGTTTGCTG 59.936 47.826 0.00 0.00 36.51 4.41
3406 3485 3.055385 TCGTAGAGGCTAATTGGTTTGCT 60.055 43.478 0.00 0.00 36.51 3.91
3407 3486 3.267483 TCGTAGAGGCTAATTGGTTTGC 58.733 45.455 0.00 0.00 35.70 3.68
3408 3487 5.411669 AGTTTCGTAGAGGCTAATTGGTTTG 59.588 40.000 0.00 0.00 38.43 2.93
3409 3488 5.557866 AGTTTCGTAGAGGCTAATTGGTTT 58.442 37.500 0.00 0.00 38.43 3.27
3410 3489 5.161943 AGTTTCGTAGAGGCTAATTGGTT 57.838 39.130 0.00 0.00 38.43 3.67
3411 3490 4.820894 AGTTTCGTAGAGGCTAATTGGT 57.179 40.909 0.00 0.00 38.43 3.67
3412 3491 5.420409 AGAAGTTTCGTAGAGGCTAATTGG 58.580 41.667 0.00 0.00 38.43 3.16
3413 3492 6.036191 GGAAGAAGTTTCGTAGAGGCTAATTG 59.964 42.308 0.00 0.00 38.43 2.32
3414 3493 6.107343 GGAAGAAGTTTCGTAGAGGCTAATT 58.893 40.000 0.00 0.00 38.43 1.40
3415 3494 5.187186 TGGAAGAAGTTTCGTAGAGGCTAAT 59.813 40.000 0.00 0.00 38.43 1.73
3416 3495 4.525487 TGGAAGAAGTTTCGTAGAGGCTAA 59.475 41.667 0.00 0.00 38.43 3.09
3417 3496 4.082354 GTGGAAGAAGTTTCGTAGAGGCTA 60.082 45.833 0.00 0.00 38.43 3.93
3418 3497 2.897969 TGGAAGAAGTTTCGTAGAGGCT 59.102 45.455 0.00 0.00 38.43 4.58
3419 3498 2.994578 GTGGAAGAAGTTTCGTAGAGGC 59.005 50.000 0.00 0.00 38.43 4.70
3420 3499 4.238514 CAGTGGAAGAAGTTTCGTAGAGG 58.761 47.826 0.00 0.00 38.43 3.69
3421 3500 4.872664 ACAGTGGAAGAAGTTTCGTAGAG 58.127 43.478 0.00 0.00 38.43 2.43
3422 3501 4.931661 ACAGTGGAAGAAGTTTCGTAGA 57.068 40.909 0.00 0.00 0.00 2.59
3423 3502 7.384115 TGAAATACAGTGGAAGAAGTTTCGTAG 59.616 37.037 0.00 0.00 0.00 3.51
3424 3503 7.211573 TGAAATACAGTGGAAGAAGTTTCGTA 58.788 34.615 0.00 0.00 0.00 3.43
3425 3504 6.053005 TGAAATACAGTGGAAGAAGTTTCGT 58.947 36.000 0.00 0.00 0.00 3.85
3426 3505 6.539649 TGAAATACAGTGGAAGAAGTTTCG 57.460 37.500 0.00 0.00 0.00 3.46
3427 3506 8.188139 TGTTTGAAATACAGTGGAAGAAGTTTC 58.812 33.333 0.00 0.00 0.00 2.78
3428 3507 8.062065 TGTTTGAAATACAGTGGAAGAAGTTT 57.938 30.769 0.00 0.00 0.00 2.66
3429 3508 7.639113 TGTTTGAAATACAGTGGAAGAAGTT 57.361 32.000 0.00 0.00 0.00 2.66
3430 3509 6.238759 GCTGTTTGAAATACAGTGGAAGAAGT 60.239 38.462 0.00 0.00 43.81 3.01
3431 3510 6.145535 GCTGTTTGAAATACAGTGGAAGAAG 58.854 40.000 0.00 0.00 43.81 2.85
3432 3511 5.277779 CGCTGTTTGAAATACAGTGGAAGAA 60.278 40.000 8.30 0.00 45.67 2.52
3433 3512 4.213270 CGCTGTTTGAAATACAGTGGAAGA 59.787 41.667 8.30 0.00 45.67 2.87
3434 3513 4.466828 CGCTGTTTGAAATACAGTGGAAG 58.533 43.478 8.30 0.00 45.67 3.46
3439 3518 4.754618 TGATCACGCTGTTTGAAATACAGT 59.245 37.500 0.00 0.00 43.81 3.55
3488 3567 8.662094 AATCAGAAGATCAACCTGCACAAGGA 62.662 42.308 0.00 0.00 40.32 3.36
3526 3605 0.110486 ACCGAGCCCAAGAACATGTT 59.890 50.000 11.78 11.78 0.00 2.71
3532 3611 2.286365 AAAATGACCGAGCCCAAGAA 57.714 45.000 0.00 0.00 0.00 2.52
3533 3612 2.304761 ACTAAAATGACCGAGCCCAAGA 59.695 45.455 0.00 0.00 0.00 3.02
3582 3661 0.035458 ACTTTTCTGCGGTCCTCAGG 59.965 55.000 9.01 0.00 32.63 3.86
3663 3742 7.735917 TCCAAAAACTATGATAGATCACGGAT 58.264 34.615 6.45 0.00 40.03 4.18
3664 3743 7.119709 TCCAAAAACTATGATAGATCACGGA 57.880 36.000 6.45 3.89 40.03 4.69
3665 3744 7.786178 TTCCAAAAACTATGATAGATCACGG 57.214 36.000 6.45 1.61 40.03 4.94
3666 3745 8.883731 ACTTTCCAAAAACTATGATAGATCACG 58.116 33.333 6.45 0.00 40.03 4.35
3680 3759 6.090223 ACAACGATGACAAACTTTCCAAAAAC 59.910 34.615 0.00 0.00 0.00 2.43
3727 3809 0.537371 CTGGGAACACACAGGGGAAC 60.537 60.000 0.00 0.00 35.60 3.62
3755 3837 5.805728 ACACCTATAAGAACAACTCCCTTG 58.194 41.667 0.00 0.00 35.77 3.61
3776 3858 7.766278 GGAATCACTTCTCTTGATAAGCTTACA 59.234 37.037 8.70 6.50 32.29 2.41
3911 3993 2.479837 TCTGTTGTCAACTTGGTAGCG 58.520 47.619 16.45 0.00 0.00 4.26
3953 4035 7.359181 GGCAAATGTAAACTAATGCAAGTGTTC 60.359 37.037 0.00 0.00 35.57 3.18
3977 4059 6.913170 TGACTTTCATGACAGATTAAAAGGC 58.087 36.000 15.71 7.10 33.36 4.35
3989 4071 2.876581 AGGGGGTTTGACTTTCATGAC 58.123 47.619 0.00 0.00 0.00 3.06
4042 4232 4.766373 TGAATGCAAAAGCTCATTAGGTCA 59.234 37.500 0.00 0.00 33.49 4.02
4044 4237 4.159135 CCTGAATGCAAAAGCTCATTAGGT 59.841 41.667 0.00 0.00 33.49 3.08
4073 4266 2.391926 TCCCAGCCCTCGACATATAA 57.608 50.000 0.00 0.00 0.00 0.98
4093 4286 2.355108 GCCTACTTCATGGAGTGCTTCA 60.355 50.000 17.48 0.00 0.00 3.02
4132 4325 5.122239 CGTTGCTCTTTTTGATGATAGGACA 59.878 40.000 0.00 0.00 0.00 4.02
4277 4470 1.422402 GAAGTGGACAAGTGGGGGTAA 59.578 52.381 0.00 0.00 0.00 2.85
4282 4475 2.816087 CAAGATGAAGTGGACAAGTGGG 59.184 50.000 0.00 0.00 0.00 4.61
4283 4476 3.251729 CACAAGATGAAGTGGACAAGTGG 59.748 47.826 0.00 0.00 32.24 4.00
4284 4477 3.304257 GCACAAGATGAAGTGGACAAGTG 60.304 47.826 0.00 0.00 36.29 3.16
4307 4500 6.667848 TGGAAGAAATATAGACCACTCTGACA 59.332 38.462 0.00 0.00 0.00 3.58
4338 4531 9.350357 GCAAATCATGGCAGAATTTATATACTG 57.650 33.333 8.90 0.00 0.00 2.74
4340 4533 9.865321 ATGCAAATCATGGCAGAATTTATATAC 57.135 29.630 8.90 0.83 44.24 1.47
4480 4676 8.592529 TGATACCAATTTTGAGATGAATGGAA 57.407 30.769 0.00 0.00 0.00 3.53
4484 4680 9.636789 TCTGATGATACCAATTTTGAGATGAAT 57.363 29.630 0.00 0.00 0.00 2.57
4540 4736 6.499106 AAATTCAAAAGGAAAGGTGGACAT 57.501 33.333 0.00 0.00 39.39 3.06
4547 4743 6.519382 AGAGAGCAAAATTCAAAAGGAAAGG 58.481 36.000 0.00 0.00 39.39 3.11
4551 4747 5.278463 CGGAAGAGAGCAAAATTCAAAAGGA 60.278 40.000 0.00 0.00 0.00 3.36
4619 4815 5.375417 TTGCAACTAACATGGAATCACAG 57.625 39.130 0.00 0.00 0.00 3.66
4626 4822 4.759693 CCACTACTTTGCAACTAACATGGA 59.240 41.667 0.00 0.00 0.00 3.41
4700 4896 4.678574 CGGGAACAGAAATACATACGACCA 60.679 45.833 0.00 0.00 0.00 4.02
4705 4901 6.281405 ACAGATCGGGAACAGAAATACATAC 58.719 40.000 0.00 0.00 0.00 2.39
4896 5093 3.831715 AGGCTTCTAAACGCAATTGAC 57.168 42.857 10.34 0.00 0.00 3.18
4922 5119 6.901357 GCAAAATTCTCAAAATGTCACACAAC 59.099 34.615 0.00 0.00 0.00 3.32
4946 5144 2.056094 ACTACGTGTGTAAGTTCCGC 57.944 50.000 0.00 0.00 0.00 5.54
4949 5147 4.084693 GGCAGAAACTACGTGTGTAAGTTC 60.085 45.833 0.00 0.00 0.00 3.01
5228 5426 6.545504 TCAGAGAGTAATTTCTGTTGCAAC 57.454 37.500 22.83 22.83 41.21 4.17
5229 5427 6.936335 TCATCAGAGAGTAATTTCTGTTGCAA 59.064 34.615 13.89 0.00 41.21 4.08
5230 5428 6.466812 TCATCAGAGAGTAATTTCTGTTGCA 58.533 36.000 13.89 4.42 41.21 4.08
5231 5429 6.036953 CCTCATCAGAGAGTAATTTCTGTTGC 59.963 42.308 13.89 0.00 44.98 4.17
5232 5430 6.036953 GCCTCATCAGAGAGTAATTTCTGTTG 59.963 42.308 12.96 12.96 44.98 3.33
5233 5431 6.070309 AGCCTCATCAGAGAGTAATTTCTGTT 60.070 38.462 10.13 0.12 44.98 3.16
5234 5432 5.424895 AGCCTCATCAGAGAGTAATTTCTGT 59.575 40.000 10.13 0.00 44.98 3.41
5282 5480 3.833070 AGTAGTTTGTGGAGGGAGTACTG 59.167 47.826 0.00 0.00 29.56 2.74
5296 5494 2.477525 GGACGGAGCGAGTAGTAGTTTG 60.478 54.545 0.00 0.00 0.00 2.93
5297 5495 1.742268 GGACGGAGCGAGTAGTAGTTT 59.258 52.381 0.00 0.00 0.00 2.66
5299 5497 0.463474 GGGACGGAGCGAGTAGTAGT 60.463 60.000 0.00 0.00 0.00 2.73
5300 5498 0.463295 TGGGACGGAGCGAGTAGTAG 60.463 60.000 0.00 0.00 0.00 2.57
5301 5499 0.035152 TTGGGACGGAGCGAGTAGTA 60.035 55.000 0.00 0.00 0.00 1.82
5302 5500 0.896940 TTTGGGACGGAGCGAGTAGT 60.897 55.000 0.00 0.00 0.00 2.73
5303 5501 0.179134 CTTTGGGACGGAGCGAGTAG 60.179 60.000 0.00 0.00 0.00 2.57
5304 5502 0.896940 ACTTTGGGACGGAGCGAGTA 60.897 55.000 0.00 0.00 0.00 2.59
5305 5503 2.207924 ACTTTGGGACGGAGCGAGT 61.208 57.895 0.00 0.00 0.00 4.18
5306 5504 1.738099 CACTTTGGGACGGAGCGAG 60.738 63.158 0.00 0.00 0.00 5.03
5307 5505 2.342279 CACTTTGGGACGGAGCGA 59.658 61.111 0.00 0.00 0.00 4.93
5308 5506 2.027625 GACACTTTGGGACGGAGCG 61.028 63.158 0.00 0.00 0.00 5.03
5309 5507 0.670854 GAGACACTTTGGGACGGAGC 60.671 60.000 0.00 0.00 0.00 4.70
5310 5508 0.679505 TGAGACACTTTGGGACGGAG 59.320 55.000 0.00 0.00 0.00 4.63
5311 5509 1.124780 TTGAGACACTTTGGGACGGA 58.875 50.000 0.00 0.00 0.00 4.69
5312 5510 1.202651 AGTTGAGACACTTTGGGACGG 60.203 52.381 0.00 0.00 0.00 4.79
5313 5511 2.240493 AGTTGAGACACTTTGGGACG 57.760 50.000 0.00 0.00 0.00 4.79
5319 5517 7.934120 AGAGCTAATACAAAGTTGAGACACTTT 59.066 33.333 0.00 0.00 46.00 2.66
5320 5518 7.445945 AGAGCTAATACAAAGTTGAGACACTT 58.554 34.615 0.00 0.00 38.74 3.16
5321 5519 6.998802 AGAGCTAATACAAAGTTGAGACACT 58.001 36.000 0.00 0.00 0.00 3.55
5322 5520 8.030106 ACTAGAGCTAATACAAAGTTGAGACAC 58.970 37.037 0.00 0.00 0.00 3.67
5323 5521 8.123639 ACTAGAGCTAATACAAAGTTGAGACA 57.876 34.615 0.00 0.00 0.00 3.41
5324 5522 9.505995 GTACTAGAGCTAATACAAAGTTGAGAC 57.494 37.037 0.00 0.00 0.00 3.36
5325 5523 9.239551 TGTACTAGAGCTAATACAAAGTTGAGA 57.760 33.333 0.00 0.00 26.61 3.27
5326 5524 9.856488 TTGTACTAGAGCTAATACAAAGTTGAG 57.144 33.333 8.58 0.00 35.60 3.02
5346 5544 9.819267 GTCTGGAGCTTAGTATAAATTTGTACT 57.181 33.333 25.08 25.08 38.43 2.73
5347 5545 9.595823 TGTCTGGAGCTTAGTATAAATTTGTAC 57.404 33.333 15.18 15.18 0.00 2.90
5348 5546 9.595823 GTGTCTGGAGCTTAGTATAAATTTGTA 57.404 33.333 0.00 0.00 0.00 2.41
5349 5547 8.322091 AGTGTCTGGAGCTTAGTATAAATTTGT 58.678 33.333 0.00 0.00 0.00 2.83
5350 5548 8.723942 AGTGTCTGGAGCTTAGTATAAATTTG 57.276 34.615 0.00 0.00 0.00 2.32
5356 5554 9.817809 CAAAATAAGTGTCTGGAGCTTAGTATA 57.182 33.333 0.00 0.00 0.00 1.47
5357 5555 7.770897 CCAAAATAAGTGTCTGGAGCTTAGTAT 59.229 37.037 0.00 0.00 0.00 2.12
5358 5556 7.103641 CCAAAATAAGTGTCTGGAGCTTAGTA 58.896 38.462 0.00 0.00 0.00 1.82
5359 5557 5.940470 CCAAAATAAGTGTCTGGAGCTTAGT 59.060 40.000 0.00 0.00 0.00 2.24
5360 5558 5.355350 CCCAAAATAAGTGTCTGGAGCTTAG 59.645 44.000 0.00 0.00 0.00 2.18
5361 5559 5.013704 TCCCAAAATAAGTGTCTGGAGCTTA 59.986 40.000 0.00 0.00 0.00 3.09
5362 5560 4.082125 CCCAAAATAAGTGTCTGGAGCTT 58.918 43.478 0.00 0.00 0.00 3.74
5363 5561 3.330701 TCCCAAAATAAGTGTCTGGAGCT 59.669 43.478 0.00 0.00 0.00 4.09
5364 5562 3.440522 GTCCCAAAATAAGTGTCTGGAGC 59.559 47.826 0.00 0.00 0.00 4.70
5365 5563 3.684788 CGTCCCAAAATAAGTGTCTGGAG 59.315 47.826 0.00 0.00 0.00 3.86
5366 5564 3.558321 CCGTCCCAAAATAAGTGTCTGGA 60.558 47.826 0.00 0.00 0.00 3.86
5367 5565 2.747446 CCGTCCCAAAATAAGTGTCTGG 59.253 50.000 0.00 0.00 0.00 3.86
5368 5566 3.670625 TCCGTCCCAAAATAAGTGTCTG 58.329 45.455 0.00 0.00 0.00 3.51
5369 5567 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
5370 5568 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
5371 5569 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
5372 5570 2.365582 CCCTCCGTCCCAAAATAAGTG 58.634 52.381 0.00 0.00 0.00 3.16
5373 5571 1.283905 CCCCTCCGTCCCAAAATAAGT 59.716 52.381 0.00 0.00 0.00 2.24
5374 5572 1.409661 CCCCCTCCGTCCCAAAATAAG 60.410 57.143 0.00 0.00 0.00 1.73
5375 5573 0.626916 CCCCCTCCGTCCCAAAATAA 59.373 55.000 0.00 0.00 0.00 1.40
5376 5574 0.550638 ACCCCCTCCGTCCCAAAATA 60.551 55.000 0.00 0.00 0.00 1.40
5377 5575 0.550638 TACCCCCTCCGTCCCAAAAT 60.551 55.000 0.00 0.00 0.00 1.82
5378 5576 1.151855 TACCCCCTCCGTCCCAAAA 60.152 57.895 0.00 0.00 0.00 2.44
5379 5577 1.919816 GTACCCCCTCCGTCCCAAA 60.920 63.158 0.00 0.00 0.00 3.28
5380 5578 1.517538 TAGTACCCCCTCCGTCCCAA 61.518 60.000 0.00 0.00 0.00 4.12
5381 5579 1.935400 TAGTACCCCCTCCGTCCCA 60.935 63.158 0.00 0.00 0.00 4.37
5382 5580 1.152589 CTAGTACCCCCTCCGTCCC 60.153 68.421 0.00 0.00 0.00 4.46
5383 5581 0.846693 TACTAGTACCCCCTCCGTCC 59.153 60.000 0.00 0.00 0.00 4.79
5384 5582 2.967745 ATACTAGTACCCCCTCCGTC 57.032 55.000 4.31 0.00 0.00 4.79
5385 5583 4.168871 AGTTTATACTAGTACCCCCTCCGT 59.831 45.833 4.31 0.00 31.21 4.69
5386 5584 4.734266 AGTTTATACTAGTACCCCCTCCG 58.266 47.826 4.31 0.00 31.21 4.63
5387 5585 6.612863 TCAAAGTTTATACTAGTACCCCCTCC 59.387 42.308 4.31 0.00 33.17 4.30
5388 5586 7.562821 TCTCAAAGTTTATACTAGTACCCCCTC 59.437 40.741 4.31 0.00 33.17 4.30
5389 5587 7.425003 TCTCAAAGTTTATACTAGTACCCCCT 58.575 38.462 4.31 0.00 33.17 4.79
5390 5588 7.666063 TCTCAAAGTTTATACTAGTACCCCC 57.334 40.000 4.31 0.00 33.17 5.40
5391 5589 8.921205 TGATCTCAAAGTTTATACTAGTACCCC 58.079 37.037 4.31 0.00 33.17 4.95
5478 5678 0.249031 GTTCAAAGGCAGTGGTGTGC 60.249 55.000 0.00 0.00 43.19 4.57
5508 5708 5.509605 TGTACGAGAATTGTTGATGTTCG 57.490 39.130 0.00 0.00 32.63 3.95
5511 5711 4.928661 GCTGTACGAGAATTGTTGATGT 57.071 40.909 0.00 0.00 32.63 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.