Multiple sequence alignment - TraesCS3D01G218400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G218400 chr3D 100.000 6261 0 0 1 6261 297593294 297599554 0.000000e+00 11562.0
1 TraesCS3D01G218400 chr3D 86.207 203 26 2 6056 6257 79608576 79608777 1.060000e-52 219.0
2 TraesCS3D01G218400 chr3D 81.455 275 44 7 5991 6261 79621257 79620986 1.060000e-52 219.0
3 TraesCS3D01G218400 chr3D 93.407 91 4 2 4665 4755 297598041 297597953 3.940000e-27 134.0
4 TraesCS3D01G218400 chr3A 96.613 3425 70 15 2079 5488 394484196 394480803 0.000000e+00 5640.0
5 TraesCS3D01G218400 chr3A 97.136 803 18 4 767 1569 394485567 394484770 0.000000e+00 1351.0
6 TraesCS3D01G218400 chr3A 97.105 449 13 0 1568 2016 394484666 394484218 0.000000e+00 758.0
7 TraesCS3D01G218400 chr3A 94.715 473 15 9 5486 5953 394480757 394480290 0.000000e+00 726.0
8 TraesCS3D01G218400 chr3A 91.304 92 5 3 4660 4748 394481537 394481628 8.520000e-24 122.0
9 TraesCS3D01G218400 chr3A 84.000 100 15 1 5674 5773 81462033 81461935 1.860000e-15 95.3
10 TraesCS3D01G218400 chr3B 96.628 2639 68 6 2079 4708 392746046 392748672 0.000000e+00 4361.0
11 TraesCS3D01G218400 chr3B 95.156 1280 28 20 767 2016 392744749 392746024 0.000000e+00 1989.0
12 TraesCS3D01G218400 chr3B 96.170 731 20 3 4766 5488 392748669 392749399 0.000000e+00 1188.0
13 TraesCS3D01G218400 chr3B 91.393 244 1 3 5486 5726 392749445 392749671 3.640000e-82 316.0
14 TraesCS3D01G218400 chr3B 91.667 168 5 4 5812 5970 392749688 392749855 2.270000e-54 224.0
15 TraesCS3D01G218400 chr3B 95.349 43 2 0 2017 2059 392746125 392746167 1.130000e-07 69.4
16 TraesCS3D01G218400 chr5D 94.595 333 18 0 434 766 41465648 41465980 3.350000e-142 516.0
17 TraesCS3D01G218400 chr5D 92.308 338 21 1 434 766 353926300 353925963 5.680000e-130 475.0
18 TraesCS3D01G218400 chr5D 91.916 334 22 4 434 767 515818397 515818725 4.420000e-126 462.0
19 TraesCS3D01G218400 chr5D 86.940 268 26 5 5995 6261 98223036 98223295 6.140000e-75 292.0
20 TraesCS3D01G218400 chr2D 93.413 334 21 1 433 766 36472113 36472445 1.570000e-135 494.0
21 TraesCS3D01G218400 chr2D 91.813 342 26 2 425 766 314275895 314276234 5.680000e-130 475.0
22 TraesCS3D01G218400 chr2D 81.685 273 46 4 5990 6260 567389316 567389046 2.270000e-54 224.0
23 TraesCS3D01G218400 chr4D 93.393 333 21 1 434 766 365095962 365096293 5.640000e-135 492.0
24 TraesCS3D01G218400 chr4D 95.122 41 2 0 297 337 487919764 487919724 1.460000e-06 65.8
25 TraesCS3D01G218400 chr7D 95.098 306 13 1 461 766 161430481 161430784 1.220000e-131 481.0
26 TraesCS3D01G218400 chr7D 91.617 334 22 2 433 766 183187209 183186882 2.060000e-124 457.0
27 TraesCS3D01G218400 chr1B 91.592 333 23 1 434 766 666552648 666552975 7.400000e-124 455.0
28 TraesCS3D01G218400 chr1B 80.216 278 45 10 5984 6257 673171209 673170938 3.830000e-47 200.0
29 TraesCS3D01G218400 chr1B 87.879 99 8 4 5676 5773 204273981 204273886 5.130000e-21 113.0
30 TraesCS3D01G218400 chr1B 90.588 85 8 0 4665 4749 550709951 550710035 5.130000e-21 113.0
31 TraesCS3D01G218400 chr1B 90.588 85 8 0 4665 4749 550983642 550983726 5.130000e-21 113.0
32 TraesCS3D01G218400 chr1B 84.848 99 11 4 5676 5773 505115274 505115179 5.170000e-16 97.1
33 TraesCS3D01G218400 chr7B 88.761 347 27 10 9 350 485077309 485076970 1.260000e-111 414.0
34 TraesCS3D01G218400 chr7B 76.699 309 49 13 43 343 481832286 481832579 3.910000e-32 150.0
35 TraesCS3D01G218400 chr5A 88.131 337 21 14 9 345 495104225 495104542 3.540000e-102 383.0
36 TraesCS3D01G218400 chr4B 86.944 337 25 10 9 345 72889011 72888694 1.660000e-95 361.0
37 TraesCS3D01G218400 chr4B 80.523 344 26 19 9 352 446767664 446767362 6.320000e-55 226.0
38 TraesCS3D01G218400 chr4B 90.588 85 7 1 4665 4748 631617885 631617969 1.850000e-20 111.0
39 TraesCS3D01G218400 chr1D 86.391 338 23 10 9 345 374739748 374740063 1.290000e-91 348.0
40 TraesCS3D01G218400 chr5B 84.911 338 28 15 9 345 127540990 127540675 2.820000e-83 320.0
41 TraesCS3D01G218400 chr5B 87.259 259 23 9 90 345 92678279 92678028 2.860000e-73 287.0
42 TraesCS3D01G218400 chr5B 85.859 99 12 2 5675 5773 390732910 390733006 3.090000e-18 104.0
43 TraesCS3D01G218400 chr5B 76.562 192 27 14 42 230 596203383 596203207 8.640000e-14 89.8
44 TraesCS3D01G218400 chr7A 87.970 266 31 1 5992 6257 61874873 61874609 4.710000e-81 313.0
45 TraesCS3D01G218400 chr7A 92.771 83 5 1 4665 4746 19449054 19448972 1.100000e-22 119.0
46 TraesCS3D01G218400 chr2B 79.630 270 49 6 5990 6257 721355760 721356025 8.290000e-44 189.0
47 TraesCS3D01G218400 chr1A 79.562 274 48 8 5988 6257 535727423 535727154 8.290000e-44 189.0
48 TraesCS3D01G218400 chr4A 79.487 273 47 9 5993 6261 646134776 646134509 1.070000e-42 185.0
49 TraesCS3D01G218400 chr2A 91.954 87 5 2 4664 4750 42473856 42473772 3.070000e-23 121.0
50 TraesCS3D01G218400 chr6B 88.172 93 7 4 5675 5766 200762798 200762887 2.390000e-19 108.0
51 TraesCS3D01G218400 chr6B 75.258 194 35 13 51 240 135404730 135404914 5.200000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G218400 chr3D 297593294 297599554 6260 False 11562.00 11562 100.000000 1 6261 1 chr3D.!!$F2 6260
1 TraesCS3D01G218400 chr3A 394480290 394485567 5277 True 2118.75 5640 96.392250 767 5953 4 chr3A.!!$R2 5186
2 TraesCS3D01G218400 chr3B 392744749 392749855 5106 False 1357.90 4361 94.393833 767 5970 6 chr3B.!!$F1 5203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
235 236 0.031585 GTTCCCAAAACCGGTTGCTC 59.968 55.0 23.08 4.02 0.00 4.26 F
249 250 0.036732 TTGCTCCCACTGTGATGGTC 59.963 55.0 9.86 1.15 38.16 4.02 F
289 290 0.099613 CAGATCCACTGGTCGAGTCG 59.900 60.0 6.09 6.09 42.39 4.18 F
370 371 0.107654 GTTAGATGGAAGCAGCCCGT 60.108 55.0 0.00 0.00 0.00 5.28 F
580 581 0.162294 CGAACACGTAAAAGCCCGTC 59.838 55.0 0.00 0.00 34.59 4.79 F
581 582 0.162294 GAACACGTAAAAGCCCGTCG 59.838 55.0 0.00 0.00 34.59 5.12 F
678 679 0.180406 GGCTCAAAATCTAGGCCCGA 59.820 55.0 0.00 0.00 37.12 5.14 F
978 1014 0.815615 GTTGCCATCTCCACCGATCC 60.816 60.0 0.00 0.00 0.00 3.36 F
2072 2213 0.030504 TTCAAGGTGCGTGCAATGTG 59.969 50.0 0.00 0.00 0.00 3.21 F
3503 3647 0.451783 CGTATTTGCCCAACCAGAGC 59.548 55.0 0.00 0.00 0.00 4.09 F
4350 4494 2.071778 ACAAACATGTCCAAGCCAGT 57.928 45.0 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2053 2194 0.030504 CACATTGCACGCACCTTGAA 59.969 50.000 0.00 0.00 0.00 2.69 R
2059 2200 0.030638 AAAGTCCACATTGCACGCAC 59.969 50.000 0.00 0.00 0.00 5.34 R
2060 2201 0.743688 AAAAGTCCACATTGCACGCA 59.256 45.000 0.00 0.00 0.00 5.24 R
2061 2202 1.268999 TGAAAAGTCCACATTGCACGC 60.269 47.619 0.00 0.00 0.00 5.34 R
2062 2203 2.772568 TGAAAAGTCCACATTGCACG 57.227 45.000 0.00 0.00 0.00 5.34 R
2063 2204 4.022935 TGAGATGAAAAGTCCACATTGCAC 60.023 41.667 0.00 0.00 0.00 4.57 R
2069 2210 4.090761 AGCTTGAGATGAAAAGTCCACA 57.909 40.909 0.00 0.00 0.00 4.17 R
2858 3002 0.526310 GCGCAAATCAAGGGCTAAGC 60.526 55.000 0.30 0.00 41.20 3.09 R
3880 4024 1.532868 CGGGAGTTCAAGTCAGCTTTG 59.467 52.381 0.00 0.00 31.49 2.77 R
4759 4910 0.384725 CGGCAAGAACAAAGCACTCG 60.385 55.000 0.00 0.00 0.00 4.18 R
6144 6400 0.041312 CTGTGCGGAAAACCGTTCTG 60.041 55.000 10.25 4.71 35.43 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.895607 AAAAATCGGAAACACGAACAAAAT 57.104 29.167 0.00 0.00 46.92 1.82
25 26 6.895607 AAAATCGGAAACACGAACAAAATT 57.104 29.167 0.00 0.00 46.92 1.82
26 27 6.895607 AAATCGGAAACACGAACAAAATTT 57.104 29.167 0.00 0.00 46.92 1.82
27 28 7.988904 AAATCGGAAACACGAACAAAATTTA 57.011 28.000 0.00 0.00 46.92 1.40
28 29 7.988904 AATCGGAAACACGAACAAAATTTAA 57.011 28.000 0.00 0.00 46.92 1.52
29 30 7.988904 ATCGGAAACACGAACAAAATTTAAA 57.011 28.000 0.00 0.00 46.92 1.52
30 31 7.807687 TCGGAAACACGAACAAAATTTAAAA 57.192 28.000 0.00 0.00 40.34 1.52
31 32 8.408743 TCGGAAACACGAACAAAATTTAAAAT 57.591 26.923 0.00 0.00 40.34 1.82
32 33 8.870879 TCGGAAACACGAACAAAATTTAAAATT 58.129 25.926 0.00 0.00 40.34 1.82
33 34 9.479278 CGGAAACACGAACAAAATTTAAAATTT 57.521 25.926 0.00 0.00 35.47 1.82
119 120 9.981114 AAGAAAAAGAACAGAAAAGACAAAAGA 57.019 25.926 0.00 0.00 0.00 2.52
120 121 9.981114 AGAAAAAGAACAGAAAAGACAAAAGAA 57.019 25.926 0.00 0.00 0.00 2.52
122 123 8.763049 AAAAGAACAGAAAAGACAAAAGAAGG 57.237 30.769 0.00 0.00 0.00 3.46
123 124 7.703058 AAGAACAGAAAAGACAAAAGAAGGA 57.297 32.000 0.00 0.00 0.00 3.36
124 125 7.703058 AGAACAGAAAAGACAAAAGAAGGAA 57.297 32.000 0.00 0.00 0.00 3.36
125 126 8.122472 AGAACAGAAAAGACAAAAGAAGGAAA 57.878 30.769 0.00 0.00 0.00 3.13
126 127 8.585018 AGAACAGAAAAGACAAAAGAAGGAAAA 58.415 29.630 0.00 0.00 0.00 2.29
127 128 9.203421 GAACAGAAAAGACAAAAGAAGGAAAAA 57.797 29.630 0.00 0.00 0.00 1.94
149 150 8.581253 AAAAAGGAAGAGAAAAAGACAGAGAA 57.419 30.769 0.00 0.00 0.00 2.87
150 151 8.581253 AAAAGGAAGAGAAAAAGACAGAGAAA 57.419 30.769 0.00 0.00 0.00 2.52
151 152 8.581253 AAAGGAAGAGAAAAAGACAGAGAAAA 57.419 30.769 0.00 0.00 0.00 2.29
152 153 8.581253 AAGGAAGAGAAAAAGACAGAGAAAAA 57.419 30.769 0.00 0.00 0.00 1.94
168 169 2.613026 AAAAACCCCGAAAAAGCCAG 57.387 45.000 0.00 0.00 0.00 4.85
169 170 1.491668 AAAACCCCGAAAAAGCCAGT 58.508 45.000 0.00 0.00 0.00 4.00
170 171 2.368311 AAACCCCGAAAAAGCCAGTA 57.632 45.000 0.00 0.00 0.00 2.74
171 172 1.905637 AACCCCGAAAAAGCCAGTAG 58.094 50.000 0.00 0.00 0.00 2.57
172 173 1.061546 ACCCCGAAAAAGCCAGTAGA 58.938 50.000 0.00 0.00 0.00 2.59
173 174 1.422402 ACCCCGAAAAAGCCAGTAGAA 59.578 47.619 0.00 0.00 0.00 2.10
174 175 2.084546 CCCCGAAAAAGCCAGTAGAAG 58.915 52.381 0.00 0.00 0.00 2.85
175 176 2.290071 CCCCGAAAAAGCCAGTAGAAGA 60.290 50.000 0.00 0.00 0.00 2.87
176 177 3.408634 CCCGAAAAAGCCAGTAGAAGAA 58.591 45.455 0.00 0.00 0.00 2.52
177 178 3.818773 CCCGAAAAAGCCAGTAGAAGAAA 59.181 43.478 0.00 0.00 0.00 2.52
178 179 4.277423 CCCGAAAAAGCCAGTAGAAGAAAA 59.723 41.667 0.00 0.00 0.00 2.29
179 180 5.048013 CCCGAAAAAGCCAGTAGAAGAAAAT 60.048 40.000 0.00 0.00 0.00 1.82
180 181 6.150474 CCCGAAAAAGCCAGTAGAAGAAAATA 59.850 38.462 0.00 0.00 0.00 1.40
181 182 7.308951 CCCGAAAAAGCCAGTAGAAGAAAATAA 60.309 37.037 0.00 0.00 0.00 1.40
182 183 8.079809 CCGAAAAAGCCAGTAGAAGAAAATAAA 58.920 33.333 0.00 0.00 0.00 1.40
183 184 8.902735 CGAAAAAGCCAGTAGAAGAAAATAAAC 58.097 33.333 0.00 0.00 0.00 2.01
184 185 9.744468 GAAAAAGCCAGTAGAAGAAAATAAACA 57.256 29.630 0.00 0.00 0.00 2.83
185 186 9.750125 AAAAAGCCAGTAGAAGAAAATAAACAG 57.250 29.630 0.00 0.00 0.00 3.16
186 187 8.691661 AAAGCCAGTAGAAGAAAATAAACAGA 57.308 30.769 0.00 0.00 0.00 3.41
187 188 8.691661 AAGCCAGTAGAAGAAAATAAACAGAA 57.308 30.769 0.00 0.00 0.00 3.02
188 189 8.691661 AGCCAGTAGAAGAAAATAAACAGAAA 57.308 30.769 0.00 0.00 0.00 2.52
189 190 9.131791 AGCCAGTAGAAGAAAATAAACAGAAAA 57.868 29.630 0.00 0.00 0.00 2.29
190 191 9.914131 GCCAGTAGAAGAAAATAAACAGAAAAT 57.086 29.630 0.00 0.00 0.00 1.82
196 197 9.147732 AGAAGAAAATAAACAGAAAATCCAGGT 57.852 29.630 0.00 0.00 0.00 4.00
197 198 9.764363 GAAGAAAATAAACAGAAAATCCAGGTT 57.236 29.630 0.00 0.00 0.00 3.50
198 199 9.764363 AAGAAAATAAACAGAAAATCCAGGTTC 57.236 29.630 0.00 0.00 0.00 3.62
199 200 9.147732 AGAAAATAAACAGAAAATCCAGGTTCT 57.852 29.630 0.00 0.00 34.37 3.01
213 214 4.826274 CAGGTTCTGGAAACCATCTAGA 57.174 45.455 9.45 0.00 43.22 2.43
218 219 5.843019 TTCTGGAAACCATCTAGAAGGTT 57.157 39.130 23.53 23.53 46.90 3.50
219 220 5.422214 TCTGGAAACCATCTAGAAGGTTC 57.578 43.478 27.79 20.16 46.92 3.62
220 221 4.225267 TCTGGAAACCATCTAGAAGGTTCC 59.775 45.833 27.79 26.61 46.92 3.62
221 222 3.265995 TGGAAACCATCTAGAAGGTTCCC 59.734 47.826 27.79 25.88 46.92 3.97
222 223 3.265995 GGAAACCATCTAGAAGGTTCCCA 59.734 47.826 25.30 0.00 46.92 4.37
223 224 4.263771 GGAAACCATCTAGAAGGTTCCCAA 60.264 45.833 25.30 0.00 46.92 4.12
224 225 5.321927 GAAACCATCTAGAAGGTTCCCAAA 58.678 41.667 27.79 0.00 46.92 3.28
225 226 5.333566 AACCATCTAGAAGGTTCCCAAAA 57.666 39.130 23.53 0.00 44.51 2.44
226 227 4.663334 ACCATCTAGAAGGTTCCCAAAAC 58.337 43.478 13.93 0.00 33.39 2.43
227 228 4.017126 CCATCTAGAAGGTTCCCAAAACC 58.983 47.826 5.81 0.00 40.58 3.27
228 229 3.412237 TCTAGAAGGTTCCCAAAACCG 57.588 47.619 0.00 0.00 44.82 4.44
229 230 2.039348 TCTAGAAGGTTCCCAAAACCGG 59.961 50.000 0.00 0.00 44.82 5.28
230 231 0.554305 AGAAGGTTCCCAAAACCGGT 59.446 50.000 0.00 0.00 44.82 5.28
231 232 1.063492 AGAAGGTTCCCAAAACCGGTT 60.063 47.619 15.86 15.86 44.82 4.44
232 233 1.067974 GAAGGTTCCCAAAACCGGTTG 59.932 52.381 23.08 10.35 44.82 3.77
233 234 1.068417 GGTTCCCAAAACCGGTTGC 59.932 57.895 23.08 5.36 0.00 4.17
234 235 1.396607 GGTTCCCAAAACCGGTTGCT 61.397 55.000 23.08 8.65 0.00 3.91
235 236 0.031585 GTTCCCAAAACCGGTTGCTC 59.968 55.000 23.08 4.02 0.00 4.26
236 237 1.110518 TTCCCAAAACCGGTTGCTCC 61.111 55.000 23.08 0.00 0.00 4.70
237 238 2.570284 CCCAAAACCGGTTGCTCCC 61.570 63.158 23.08 0.00 0.00 4.30
238 239 1.830408 CCAAAACCGGTTGCTCCCA 60.830 57.895 23.08 0.00 0.00 4.37
239 240 1.362355 CAAAACCGGTTGCTCCCAC 59.638 57.895 23.08 0.00 0.00 4.61
240 241 1.106944 CAAAACCGGTTGCTCCCACT 61.107 55.000 23.08 0.00 0.00 4.00
241 242 1.106944 AAAACCGGTTGCTCCCACTG 61.107 55.000 23.08 0.00 0.00 3.66
242 243 2.279037 AAACCGGTTGCTCCCACTGT 62.279 55.000 23.08 0.00 0.00 3.55
243 244 2.669569 CCGGTTGCTCCCACTGTG 60.670 66.667 0.00 0.00 0.00 3.66
244 245 2.425592 CGGTTGCTCCCACTGTGA 59.574 61.111 9.86 0.00 0.00 3.58
245 246 1.003355 CGGTTGCTCCCACTGTGAT 60.003 57.895 9.86 0.00 0.00 3.06
246 247 1.300971 CGGTTGCTCCCACTGTGATG 61.301 60.000 9.86 0.00 0.00 3.07
247 248 0.962356 GGTTGCTCCCACTGTGATGG 60.962 60.000 9.86 2.88 39.71 3.51
248 249 0.250901 GTTGCTCCCACTGTGATGGT 60.251 55.000 9.86 0.00 38.16 3.55
249 250 0.036732 TTGCTCCCACTGTGATGGTC 59.963 55.000 9.86 1.15 38.16 4.02
250 251 1.126948 TGCTCCCACTGTGATGGTCA 61.127 55.000 9.86 3.57 38.16 4.02
261 262 2.607187 GTGATGGTCACGGTCTAAGTG 58.393 52.381 0.00 0.00 37.67 3.16
262 263 1.548719 TGATGGTCACGGTCTAAGTGG 59.451 52.381 0.00 0.00 39.86 4.00
263 264 0.902531 ATGGTCACGGTCTAAGTGGG 59.097 55.000 0.00 0.00 39.86 4.61
264 265 1.079336 GGTCACGGTCTAAGTGGGC 60.079 63.158 0.00 0.00 39.86 5.36
265 266 1.079336 GTCACGGTCTAAGTGGGCC 60.079 63.158 0.00 0.00 39.86 5.80
268 269 4.832608 CGGTCTAAGTGGGCCGGC 62.833 72.222 21.18 21.18 40.45 6.13
269 270 4.484872 GGTCTAAGTGGGCCGGCC 62.485 72.222 38.57 38.57 0.00 6.13
280 281 4.864334 GCCGGCCCAGATCCACTG 62.864 72.222 18.11 0.00 45.36 3.66
289 290 0.099613 CAGATCCACTGGTCGAGTCG 59.900 60.000 6.09 6.09 42.39 4.18
290 291 0.322636 AGATCCACTGGTCGAGTCGT 60.323 55.000 13.12 0.00 29.75 4.34
291 292 0.526662 GATCCACTGGTCGAGTCGTT 59.473 55.000 13.12 0.00 29.75 3.85
292 293 0.243907 ATCCACTGGTCGAGTCGTTG 59.756 55.000 13.12 4.10 29.75 4.10
293 294 1.372997 CCACTGGTCGAGTCGTTGG 60.373 63.158 13.12 8.65 29.75 3.77
294 295 2.022129 CACTGGTCGAGTCGTTGGC 61.022 63.158 13.12 1.84 29.75 4.52
295 296 2.201022 ACTGGTCGAGTCGTTGGCT 61.201 57.895 13.12 0.00 0.00 4.75
296 297 1.006102 CTGGTCGAGTCGTTGGCTT 60.006 57.895 13.12 0.00 0.00 4.35
297 298 1.284982 CTGGTCGAGTCGTTGGCTTG 61.285 60.000 13.12 0.00 0.00 4.01
298 299 1.300697 GGTCGAGTCGTTGGCTTGT 60.301 57.895 13.12 0.00 0.00 3.16
299 300 1.557443 GGTCGAGTCGTTGGCTTGTG 61.557 60.000 13.12 0.00 0.00 3.33
300 301 1.954146 TCGAGTCGTTGGCTTGTGC 60.954 57.895 13.12 0.00 38.76 4.57
301 302 2.551270 GAGTCGTTGGCTTGTGCG 59.449 61.111 0.00 0.00 40.82 5.34
302 303 2.203015 AGTCGTTGGCTTGTGCGT 60.203 55.556 0.00 0.00 40.82 5.24
303 304 1.772063 GAGTCGTTGGCTTGTGCGTT 61.772 55.000 0.00 0.00 40.82 4.84
304 305 1.654137 GTCGTTGGCTTGTGCGTTG 60.654 57.895 0.00 0.00 40.82 4.10
305 306 3.024043 CGTTGGCTTGTGCGTTGC 61.024 61.111 0.00 0.00 40.82 4.17
306 307 3.024043 GTTGGCTTGTGCGTTGCG 61.024 61.111 0.00 0.00 40.82 4.85
307 308 3.513438 TTGGCTTGTGCGTTGCGT 61.513 55.556 0.00 0.00 40.82 5.24
308 309 3.462333 TTGGCTTGTGCGTTGCGTC 62.462 57.895 0.00 0.00 40.82 5.19
310 311 3.995669 GCTTGTGCGTTGCGTCGA 61.996 61.111 0.00 0.00 0.00 4.20
311 312 2.128128 CTTGTGCGTTGCGTCGAC 60.128 61.111 5.18 5.18 0.00 4.20
312 313 2.866010 CTTGTGCGTTGCGTCGACA 61.866 57.895 17.16 0.00 0.00 4.35
313 314 2.158058 CTTGTGCGTTGCGTCGACAT 62.158 55.000 17.16 0.00 0.00 3.06
314 315 1.767127 TTGTGCGTTGCGTCGACATT 61.767 50.000 17.16 0.00 0.00 2.71
315 316 1.083015 GTGCGTTGCGTCGACATTT 60.083 52.632 17.16 0.00 0.00 2.32
316 317 1.052768 GTGCGTTGCGTCGACATTTC 61.053 55.000 17.16 1.84 0.00 2.17
338 339 1.571460 GCAATGAGCGGCGAATAGG 59.429 57.895 12.98 0.00 0.00 2.57
339 340 0.880278 GCAATGAGCGGCGAATAGGA 60.880 55.000 12.98 0.00 0.00 2.94
340 341 1.581934 CAATGAGCGGCGAATAGGAA 58.418 50.000 12.98 0.00 0.00 3.36
341 342 1.939934 CAATGAGCGGCGAATAGGAAA 59.060 47.619 12.98 0.00 0.00 3.13
342 343 2.549754 CAATGAGCGGCGAATAGGAAAT 59.450 45.455 12.98 0.00 0.00 2.17
343 344 3.678056 ATGAGCGGCGAATAGGAAATA 57.322 42.857 12.98 0.00 0.00 1.40
344 345 2.750948 TGAGCGGCGAATAGGAAATAC 58.249 47.619 12.98 0.00 0.00 1.89
345 346 1.719780 GAGCGGCGAATAGGAAATACG 59.280 52.381 12.98 0.00 0.00 3.06
346 347 0.788391 GCGGCGAATAGGAAATACGG 59.212 55.000 12.98 0.00 0.00 4.02
347 348 1.870993 GCGGCGAATAGGAAATACGGT 60.871 52.381 12.98 0.00 0.00 4.83
348 349 2.476821 CGGCGAATAGGAAATACGGTT 58.523 47.619 0.00 0.00 0.00 4.44
349 350 2.867975 CGGCGAATAGGAAATACGGTTT 59.132 45.455 0.00 0.00 0.00 3.27
350 351 4.050553 CGGCGAATAGGAAATACGGTTTA 58.949 43.478 0.00 0.00 0.00 2.01
351 352 4.149396 CGGCGAATAGGAAATACGGTTTAG 59.851 45.833 0.00 0.00 0.00 1.85
352 353 5.052481 GGCGAATAGGAAATACGGTTTAGT 58.948 41.667 0.00 0.00 0.00 2.24
353 354 5.525012 GGCGAATAGGAAATACGGTTTAGTT 59.475 40.000 0.00 0.00 0.00 2.24
354 355 6.701400 GGCGAATAGGAAATACGGTTTAGTTA 59.299 38.462 0.00 0.00 0.00 2.24
355 356 7.095899 GGCGAATAGGAAATACGGTTTAGTTAG 60.096 40.741 0.00 0.00 0.00 2.34
356 357 7.649306 GCGAATAGGAAATACGGTTTAGTTAGA 59.351 37.037 0.00 0.00 0.00 2.10
357 358 9.688592 CGAATAGGAAATACGGTTTAGTTAGAT 57.311 33.333 0.00 0.00 0.00 1.98
359 360 9.774413 AATAGGAAATACGGTTTAGTTAGATGG 57.226 33.333 0.00 0.00 0.00 3.51
360 361 7.427989 AGGAAATACGGTTTAGTTAGATGGA 57.572 36.000 0.00 0.00 0.00 3.41
361 362 7.854337 AGGAAATACGGTTTAGTTAGATGGAA 58.146 34.615 0.00 0.00 0.00 3.53
362 363 7.985752 AGGAAATACGGTTTAGTTAGATGGAAG 59.014 37.037 0.00 0.00 0.00 3.46
363 364 7.254692 GGAAATACGGTTTAGTTAGATGGAAGC 60.255 40.741 0.00 0.00 0.00 3.86
364 365 4.546829 ACGGTTTAGTTAGATGGAAGCA 57.453 40.909 0.00 0.00 0.00 3.91
365 366 4.504858 ACGGTTTAGTTAGATGGAAGCAG 58.495 43.478 0.00 0.00 0.00 4.24
366 367 3.309954 CGGTTTAGTTAGATGGAAGCAGC 59.690 47.826 0.00 0.00 0.00 5.25
367 368 3.628032 GGTTTAGTTAGATGGAAGCAGCC 59.372 47.826 0.00 0.00 0.00 4.85
368 369 3.560636 TTAGTTAGATGGAAGCAGCCC 57.439 47.619 0.00 0.00 0.00 5.19
369 370 0.179000 AGTTAGATGGAAGCAGCCCG 59.821 55.000 0.00 0.00 0.00 6.13
370 371 0.107654 GTTAGATGGAAGCAGCCCGT 60.108 55.000 0.00 0.00 0.00 5.28
371 372 1.138266 GTTAGATGGAAGCAGCCCGTA 59.862 52.381 0.00 0.00 0.00 4.02
372 373 1.491668 TAGATGGAAGCAGCCCGTAA 58.508 50.000 0.00 0.00 0.00 3.18
373 374 0.618458 AGATGGAAGCAGCCCGTAAA 59.382 50.000 0.00 0.00 0.00 2.01
374 375 1.004277 AGATGGAAGCAGCCCGTAAAA 59.996 47.619 0.00 0.00 0.00 1.52
375 376 1.401905 GATGGAAGCAGCCCGTAAAAG 59.598 52.381 0.00 0.00 0.00 2.27
376 377 1.241315 TGGAAGCAGCCCGTAAAAGC 61.241 55.000 0.00 0.00 0.00 3.51
377 378 1.134694 GAAGCAGCCCGTAAAAGCG 59.865 57.895 0.00 0.00 0.00 4.68
378 379 1.574702 GAAGCAGCCCGTAAAAGCGT 61.575 55.000 0.00 0.00 0.00 5.07
379 380 1.852067 AAGCAGCCCGTAAAAGCGTG 61.852 55.000 0.00 0.00 0.00 5.34
380 381 2.613506 GCAGCCCGTAAAAGCGTGT 61.614 57.895 0.00 0.00 0.00 4.49
381 382 1.293267 GCAGCCCGTAAAAGCGTGTA 61.293 55.000 0.00 0.00 0.00 2.90
382 383 1.149987 CAGCCCGTAAAAGCGTGTAA 58.850 50.000 0.00 0.00 0.00 2.41
383 384 1.532007 CAGCCCGTAAAAGCGTGTAAA 59.468 47.619 0.00 0.00 0.00 2.01
384 385 1.532437 AGCCCGTAAAAGCGTGTAAAC 59.468 47.619 0.00 0.00 0.00 2.01
385 386 1.263752 GCCCGTAAAAGCGTGTAAACA 59.736 47.619 0.00 0.00 0.00 2.83
386 387 2.663606 GCCCGTAAAAGCGTGTAAACAG 60.664 50.000 0.00 0.00 0.00 3.16
387 388 2.567067 CCGTAAAAGCGTGTAAACAGC 58.433 47.619 0.00 0.00 0.00 4.40
388 389 2.032722 CCGTAAAAGCGTGTAAACAGCA 60.033 45.455 3.33 0.00 0.00 4.41
389 390 2.962191 CGTAAAAGCGTGTAAACAGCAC 59.038 45.455 3.33 0.00 0.00 4.40
413 414 3.634568 CGTTTAGCATTGTTTGTCCCA 57.365 42.857 0.00 0.00 0.00 4.37
414 415 3.305110 CGTTTAGCATTGTTTGTCCCAC 58.695 45.455 0.00 0.00 0.00 4.61
415 416 3.305110 GTTTAGCATTGTTTGTCCCACG 58.695 45.455 0.00 0.00 0.00 4.94
416 417 2.552599 TAGCATTGTTTGTCCCACGA 57.447 45.000 0.00 0.00 0.00 4.35
417 418 1.238439 AGCATTGTTTGTCCCACGAG 58.762 50.000 0.00 0.00 0.00 4.18
418 419 0.387239 GCATTGTTTGTCCCACGAGC 60.387 55.000 0.00 0.00 0.00 5.03
419 420 0.950836 CATTGTTTGTCCCACGAGCA 59.049 50.000 0.00 0.00 0.00 4.26
420 421 0.951558 ATTGTTTGTCCCACGAGCAC 59.048 50.000 0.00 0.00 0.00 4.40
421 422 0.393132 TTGTTTGTCCCACGAGCACA 60.393 50.000 0.00 0.00 0.00 4.57
422 423 0.393132 TGTTTGTCCCACGAGCACAA 60.393 50.000 0.00 0.00 0.00 3.33
423 424 0.307760 GTTTGTCCCACGAGCACAAG 59.692 55.000 0.00 0.00 31.81 3.16
424 425 1.444119 TTTGTCCCACGAGCACAAGC 61.444 55.000 0.00 0.00 42.56 4.01
425 426 2.280797 GTCCCACGAGCACAAGCA 60.281 61.111 0.00 0.00 45.49 3.91
426 427 2.280797 TCCCACGAGCACAAGCAC 60.281 61.111 0.00 0.00 45.49 4.40
427 428 3.357079 CCCACGAGCACAAGCACC 61.357 66.667 0.00 0.00 45.49 5.01
428 429 3.357079 CCACGAGCACAAGCACCC 61.357 66.667 0.00 0.00 45.49 4.61
429 430 2.281070 CACGAGCACAAGCACCCT 60.281 61.111 0.00 0.00 45.49 4.34
430 431 2.281070 ACGAGCACAAGCACCCTG 60.281 61.111 0.00 0.00 45.49 4.45
431 432 2.281070 CGAGCACAAGCACCCTGT 60.281 61.111 0.00 0.00 45.49 4.00
432 433 2.610694 CGAGCACAAGCACCCTGTG 61.611 63.158 0.00 0.00 45.49 3.66
433 434 1.526917 GAGCACAAGCACCCTGTGT 60.527 57.895 5.00 0.00 45.49 3.72
434 435 0.250295 GAGCACAAGCACCCTGTGTA 60.250 55.000 5.00 0.00 45.49 2.90
435 436 0.401738 AGCACAAGCACCCTGTGTAT 59.598 50.000 5.00 0.00 45.49 2.29
436 437 1.628340 AGCACAAGCACCCTGTGTATA 59.372 47.619 5.00 0.00 45.49 1.47
437 438 2.239654 AGCACAAGCACCCTGTGTATAT 59.760 45.455 5.00 0.00 45.49 0.86
438 439 2.614057 GCACAAGCACCCTGTGTATATC 59.386 50.000 5.00 0.00 41.58 1.63
439 440 3.682718 GCACAAGCACCCTGTGTATATCT 60.683 47.826 5.00 0.00 41.58 1.98
440 441 3.873361 CACAAGCACCCTGTGTATATCTG 59.127 47.826 0.00 0.00 35.75 2.90
441 442 3.118261 ACAAGCACCCTGTGTATATCTGG 60.118 47.826 0.00 0.00 35.75 3.86
442 443 1.417890 AGCACCCTGTGTATATCTGGC 59.582 52.381 0.00 0.00 35.75 4.85
443 444 1.543429 GCACCCTGTGTATATCTGGCC 60.543 57.143 0.00 0.00 35.75 5.36
444 445 1.768275 CACCCTGTGTATATCTGGCCA 59.232 52.381 4.71 4.71 0.00 5.36
445 446 2.373169 CACCCTGTGTATATCTGGCCAT 59.627 50.000 5.51 0.00 0.00 4.40
446 447 3.582647 CACCCTGTGTATATCTGGCCATA 59.417 47.826 5.51 0.00 0.00 2.74
447 448 3.583086 ACCCTGTGTATATCTGGCCATAC 59.417 47.826 5.51 6.59 0.00 2.39
448 449 3.055094 CCCTGTGTATATCTGGCCATACC 60.055 52.174 5.51 1.01 39.84 2.73
449 450 3.840666 CCTGTGTATATCTGGCCATACCT 59.159 47.826 5.51 0.00 40.22 3.08
450 451 4.081420 CCTGTGTATATCTGGCCATACCTC 60.081 50.000 5.51 2.97 40.22 3.85
451 452 3.509967 TGTGTATATCTGGCCATACCTCG 59.490 47.826 5.51 0.00 40.22 4.63
452 453 3.096852 TGTATATCTGGCCATACCTCGG 58.903 50.000 5.51 0.00 40.22 4.63
453 454 1.573108 ATATCTGGCCATACCTCGGG 58.427 55.000 5.51 0.00 40.22 5.14
454 455 0.485543 TATCTGGCCATACCTCGGGA 59.514 55.000 5.51 0.00 40.22 5.14
455 456 1.122019 ATCTGGCCATACCTCGGGAC 61.122 60.000 5.51 0.00 40.22 4.46
456 457 3.151710 TGGCCATACCTCGGGACG 61.152 66.667 0.00 0.00 46.96 4.79
480 481 4.593864 GCTTCGAGCCGGGCCTAG 62.594 72.222 17.02 7.55 34.48 3.02
481 482 4.593864 CTTCGAGCCGGGCCTAGC 62.594 72.222 17.02 5.99 0.00 3.42
494 495 4.451150 CTAGCCAAGCCCGACGCA 62.451 66.667 0.00 0.00 41.38 5.24
495 496 3.950794 CTAGCCAAGCCCGACGCAA 62.951 63.158 0.00 0.00 41.38 4.85
496 497 3.538785 TAGCCAAGCCCGACGCAAA 62.539 57.895 0.00 0.00 41.38 3.68
497 498 3.972276 GCCAAGCCCGACGCAAAA 61.972 61.111 0.00 0.00 41.38 2.44
498 499 2.725008 CCAAGCCCGACGCAAAAA 59.275 55.556 0.00 0.00 41.38 1.94
512 513 2.600470 AAAAACCCAGGCCCGAGC 60.600 61.111 0.00 0.00 38.76 5.03
544 545 2.032071 CCGTCAGGCCGGTTTTCT 59.968 61.111 1.90 0.00 43.07 2.52
545 546 2.325082 CCGTCAGGCCGGTTTTCTG 61.325 63.158 1.90 6.61 43.07 3.02
547 548 1.971695 GTCAGGCCGGTTTTCTGGG 60.972 63.158 1.90 0.00 46.03 4.45
552 553 4.338710 CCGGTTTTCTGGGCCCGA 62.339 66.667 19.37 14.97 43.01 5.14
553 554 2.746277 CGGTTTTCTGGGCCCGAG 60.746 66.667 19.37 15.85 43.01 4.63
554 555 3.062466 GGTTTTCTGGGCCCGAGC 61.062 66.667 19.37 6.33 38.76 5.03
570 571 4.382320 GCCTGGCCCGAACACGTA 62.382 66.667 7.66 0.00 0.00 3.57
571 572 2.344500 CCTGGCCCGAACACGTAA 59.656 61.111 0.00 0.00 0.00 3.18
572 573 1.301874 CCTGGCCCGAACACGTAAA 60.302 57.895 0.00 0.00 0.00 2.01
573 574 0.885596 CCTGGCCCGAACACGTAAAA 60.886 55.000 0.00 0.00 0.00 1.52
574 575 0.515564 CTGGCCCGAACACGTAAAAG 59.484 55.000 0.00 0.00 0.00 2.27
575 576 1.208358 GGCCCGAACACGTAAAAGC 59.792 57.895 0.00 0.00 0.00 3.51
576 577 1.208358 GCCCGAACACGTAAAAGCC 59.792 57.895 0.00 0.00 0.00 4.35
577 578 1.871077 CCCGAACACGTAAAAGCCC 59.129 57.895 0.00 0.00 0.00 5.19
578 579 1.494189 CCGAACACGTAAAAGCCCG 59.506 57.895 0.00 0.00 0.00 6.13
579 580 1.223417 CCGAACACGTAAAAGCCCGT 61.223 55.000 0.00 0.00 37.90 5.28
580 581 0.162294 CGAACACGTAAAAGCCCGTC 59.838 55.000 0.00 0.00 34.59 4.79
581 582 0.162294 GAACACGTAAAAGCCCGTCG 59.838 55.000 0.00 0.00 34.59 5.12
582 583 1.223417 AACACGTAAAAGCCCGTCGG 61.223 55.000 3.60 3.60 34.59 4.79
625 626 3.776340 TCCTTCAGGAAAACGCAAAAAC 58.224 40.909 0.00 0.00 42.18 2.43
626 627 2.533942 CCTTCAGGAAAACGCAAAAACG 59.466 45.455 0.00 0.00 37.39 3.60
627 628 3.430931 CTTCAGGAAAACGCAAAAACGA 58.569 40.909 0.00 0.00 36.70 3.85
628 629 3.701532 TCAGGAAAACGCAAAAACGAT 57.298 38.095 0.00 0.00 36.70 3.73
629 630 3.367607 TCAGGAAAACGCAAAAACGATG 58.632 40.909 0.00 0.00 36.70 3.84
630 631 2.470999 CAGGAAAACGCAAAAACGATGG 59.529 45.455 0.00 0.00 36.70 3.51
631 632 1.790043 GGAAAACGCAAAAACGATGGG 59.210 47.619 0.00 0.00 36.70 4.00
632 633 1.191425 GAAAACGCAAAAACGATGGGC 59.809 47.619 0.00 0.00 36.70 5.36
633 634 0.598942 AAACGCAAAAACGATGGGCC 60.599 50.000 0.00 0.00 36.70 5.80
634 635 2.126110 CGCAAAAACGATGGGCCC 60.126 61.111 17.59 17.59 34.06 5.80
635 636 2.126110 GCAAAAACGATGGGCCCG 60.126 61.111 19.37 7.98 0.00 6.13
636 637 2.571231 CAAAAACGATGGGCCCGG 59.429 61.111 19.37 11.81 0.00 5.73
637 638 2.678580 AAAAACGATGGGCCCGGG 60.679 61.111 19.09 19.09 0.00 5.73
658 659 4.222847 GGCCTAGCCCGGTCTTCG 62.223 72.222 0.00 0.00 44.06 3.79
667 668 4.371975 CGGTCTTCGGGCTCAAAA 57.628 55.556 0.00 0.00 34.75 2.44
668 669 2.854522 CGGTCTTCGGGCTCAAAAT 58.145 52.632 0.00 0.00 34.75 1.82
669 670 0.727398 CGGTCTTCGGGCTCAAAATC 59.273 55.000 0.00 0.00 34.75 2.17
670 671 1.676014 CGGTCTTCGGGCTCAAAATCT 60.676 52.381 0.00 0.00 34.75 2.40
671 672 2.418197 CGGTCTTCGGGCTCAAAATCTA 60.418 50.000 0.00 0.00 34.75 1.98
672 673 3.198872 GGTCTTCGGGCTCAAAATCTAG 58.801 50.000 0.00 0.00 0.00 2.43
673 674 3.198872 GTCTTCGGGCTCAAAATCTAGG 58.801 50.000 0.00 0.00 0.00 3.02
674 675 1.943340 CTTCGGGCTCAAAATCTAGGC 59.057 52.381 0.00 0.00 37.55 3.93
677 678 2.707902 GGCTCAAAATCTAGGCCCG 58.292 57.895 0.00 0.00 37.12 6.13
678 679 0.180406 GGCTCAAAATCTAGGCCCGA 59.820 55.000 0.00 0.00 37.12 5.14
679 680 1.587547 GCTCAAAATCTAGGCCCGAG 58.412 55.000 0.00 0.00 0.00 4.63
680 681 1.587547 CTCAAAATCTAGGCCCGAGC 58.412 55.000 0.00 0.00 38.76 5.03
721 722 4.016706 CGGACCGGGTCAGGCTTT 62.017 66.667 27.32 0.00 33.68 3.51
722 723 2.434774 GGACCGGGTCAGGCTTTT 59.565 61.111 27.32 0.00 33.68 2.27
723 724 1.228459 GGACCGGGTCAGGCTTTTT 60.228 57.895 27.32 0.00 33.68 1.94
724 725 1.241990 GGACCGGGTCAGGCTTTTTC 61.242 60.000 27.32 4.14 33.68 2.29
725 726 1.574702 GACCGGGTCAGGCTTTTTCG 61.575 60.000 22.10 0.00 32.09 3.46
726 727 2.332654 CCGGGTCAGGCTTTTTCGG 61.333 63.158 0.00 2.50 0.00 4.30
727 728 2.332654 CGGGTCAGGCTTTTTCGGG 61.333 63.158 0.00 0.00 0.00 5.14
728 729 2.636412 GGGTCAGGCTTTTTCGGGC 61.636 63.158 0.00 0.00 0.00 6.13
775 776 4.598257 CAGGACTAACCCTGTGCG 57.402 61.111 0.00 0.00 46.62 5.34
890 891 2.243957 CGAAACGCCACAGCTGTCA 61.244 57.895 18.64 0.00 36.60 3.58
978 1014 0.815615 GTTGCCATCTCCACCGATCC 60.816 60.000 0.00 0.00 0.00 3.36
1440 1476 3.151554 CCAAGGTACACCCAGTTTAACC 58.848 50.000 0.00 0.00 36.42 2.85
1447 1483 3.329277 ACACCCAGTTTAACCCCTTAGA 58.671 45.455 0.00 0.00 0.00 2.10
1537 1573 5.248640 CCACTGCTTTAGGAAATCTCTTGA 58.751 41.667 0.00 0.00 0.00 3.02
1557 1593 5.534207 TGACTGCAATGAAGATGGTTTTT 57.466 34.783 0.00 0.00 0.00 1.94
1561 1597 6.218746 ACTGCAATGAAGATGGTTTTTCTTC 58.781 36.000 0.00 6.50 46.04 2.87
1705 1846 1.455587 CCCTGTTTGTGGTGGTGCT 60.456 57.895 0.00 0.00 0.00 4.40
1796 1937 7.033530 TCACTAACGGATGTTTGTTCATTTT 57.966 32.000 0.00 0.00 41.14 1.82
1811 1952 8.801715 TTGTTCATTTTGATTGAGAAGTTAGC 57.198 30.769 0.00 0.00 0.00 3.09
1819 1960 3.418684 TTGAGAAGTTAGCAAGGGACC 57.581 47.619 0.00 0.00 0.00 4.46
1990 2131 2.503765 CCTCTTTTCCTCTCCTTCCTCC 59.496 54.545 0.00 0.00 0.00 4.30
2020 2161 2.017783 GCAAGGTGCGTGCAATGTG 61.018 57.895 0.00 0.00 41.80 3.21
2021 2162 1.372004 CAAGGTGCGTGCAATGTGG 60.372 57.895 0.00 0.00 0.00 4.17
2022 2163 1.528076 AAGGTGCGTGCAATGTGGA 60.528 52.632 0.00 0.00 0.00 4.02
2023 2164 1.795170 AAGGTGCGTGCAATGTGGAC 61.795 55.000 0.00 0.00 35.21 4.02
2026 2167 0.871722 GTGCGTGCAATGTGGACTTA 59.128 50.000 0.00 0.00 36.50 2.24
2027 2168 1.135972 GTGCGTGCAATGTGGACTTAG 60.136 52.381 0.00 0.00 36.50 2.18
2028 2169 1.156736 GCGTGCAATGTGGACTTAGT 58.843 50.000 0.00 0.00 36.50 2.24
2029 2170 2.289133 TGCGTGCAATGTGGACTTAGTA 60.289 45.455 0.00 0.00 36.50 1.82
2030 2171 2.936498 GCGTGCAATGTGGACTTAGTAT 59.064 45.455 0.00 0.00 36.50 2.12
2031 2172 3.374058 GCGTGCAATGTGGACTTAGTATT 59.626 43.478 0.00 0.00 36.50 1.89
2032 2173 4.727734 GCGTGCAATGTGGACTTAGTATTG 60.728 45.833 0.00 2.25 36.50 1.90
2033 2174 4.629634 CGTGCAATGTGGACTTAGTATTGA 59.370 41.667 9.10 0.00 36.50 2.57
2035 2176 4.635765 TGCAATGTGGACTTAGTATTGAGC 59.364 41.667 9.10 0.00 32.05 4.26
2036 2177 4.635765 GCAATGTGGACTTAGTATTGAGCA 59.364 41.667 9.10 0.00 32.05 4.26
2037 2178 5.123820 GCAATGTGGACTTAGTATTGAGCAA 59.876 40.000 9.10 0.00 32.05 3.91
2038 2179 6.183360 GCAATGTGGACTTAGTATTGAGCAAT 60.183 38.462 9.10 0.97 32.05 3.56
2039 2180 7.629222 GCAATGTGGACTTAGTATTGAGCAATT 60.629 37.037 9.10 0.00 32.05 2.32
2040 2181 7.944729 ATGTGGACTTAGTATTGAGCAATTT 57.055 32.000 0.52 0.00 32.50 1.82
2041 2182 9.461312 AATGTGGACTTAGTATTGAGCAATTTA 57.539 29.630 0.52 0.00 32.50 1.40
2042 2183 8.492673 TGTGGACTTAGTATTGAGCAATTTAG 57.507 34.615 0.52 0.00 32.50 1.85
2043 2184 8.100791 TGTGGACTTAGTATTGAGCAATTTAGT 58.899 33.333 0.52 1.16 32.50 2.24
2044 2185 8.391106 GTGGACTTAGTATTGAGCAATTTAGTG 58.609 37.037 0.52 0.00 32.50 2.74
2045 2186 8.100791 TGGACTTAGTATTGAGCAATTTAGTGT 58.899 33.333 0.52 0.00 32.50 3.55
2046 2187 8.947115 GGACTTAGTATTGAGCAATTTAGTGTT 58.053 33.333 0.52 0.00 32.50 3.32
2059 2200 9.696917 AGCAATTTAGTGTTTTAAGATTCAAGG 57.303 29.630 0.00 0.00 0.00 3.61
2060 2201 9.476202 GCAATTTAGTGTTTTAAGATTCAAGGT 57.524 29.630 0.00 0.00 0.00 3.50
2062 2203 9.476202 AATTTAGTGTTTTAAGATTCAAGGTGC 57.524 29.630 0.00 0.00 0.00 5.01
2063 2204 5.108385 AGTGTTTTAAGATTCAAGGTGCG 57.892 39.130 0.00 0.00 0.00 5.34
2064 2205 4.578928 AGTGTTTTAAGATTCAAGGTGCGT 59.421 37.500 0.00 0.00 0.00 5.24
2065 2206 4.675114 GTGTTTTAAGATTCAAGGTGCGTG 59.325 41.667 0.00 0.00 0.00 5.34
2066 2207 3.552604 TTTAAGATTCAAGGTGCGTGC 57.447 42.857 0.00 0.00 0.00 5.34
2067 2208 2.177394 TAAGATTCAAGGTGCGTGCA 57.823 45.000 0.00 0.00 0.00 4.57
2068 2209 1.317613 AAGATTCAAGGTGCGTGCAA 58.682 45.000 0.00 0.00 0.00 4.08
2069 2210 1.538047 AGATTCAAGGTGCGTGCAAT 58.462 45.000 0.00 0.00 0.00 3.56
2070 2211 1.200716 AGATTCAAGGTGCGTGCAATG 59.799 47.619 0.00 0.00 0.00 2.82
2071 2212 0.961019 ATTCAAGGTGCGTGCAATGT 59.039 45.000 0.00 0.00 0.00 2.71
2072 2213 0.030504 TTCAAGGTGCGTGCAATGTG 59.969 50.000 0.00 0.00 0.00 3.21
2073 2214 1.372004 CAAGGTGCGTGCAATGTGG 60.372 57.895 0.00 0.00 0.00 4.17
2074 2215 1.528076 AAGGTGCGTGCAATGTGGA 60.528 52.632 0.00 0.00 0.00 4.02
2075 2216 1.795170 AAGGTGCGTGCAATGTGGAC 61.795 55.000 0.00 0.00 35.21 4.02
2076 2217 2.260869 GGTGCGTGCAATGTGGACT 61.261 57.895 0.00 0.00 36.50 3.85
2077 2218 1.654220 GTGCGTGCAATGTGGACTT 59.346 52.632 0.00 0.00 36.50 3.01
2110 2251 4.253685 GCTATGAGCGGATAAGGCAATTA 58.746 43.478 0.00 0.00 0.00 1.40
2181 2322 6.985188 TGTGGACTTAGTATTGAGCAATTC 57.015 37.500 0.52 0.00 32.50 2.17
2858 3002 9.229784 GACACATATGCAACTGAATAAATTCTG 57.770 33.333 1.58 7.74 40.32 3.02
2943 3087 5.662211 GCACAATGCACTGAAAAAGATTT 57.338 34.783 0.26 0.00 44.26 2.17
3032 3176 5.136105 AGGAATGCCTTTTGCTATTAGGAG 58.864 41.667 0.00 0.00 43.90 3.69
3048 3192 7.012610 GCTATTAGGAGAACTCGGATATACCTC 59.987 44.444 0.00 0.00 36.31 3.85
3085 3229 1.726853 ACCTAGAAGCGTTGTCATGC 58.273 50.000 0.00 0.00 34.79 4.06
3103 3247 6.375736 TGTCATGCGATATTGAAAACCCTTTA 59.624 34.615 0.00 0.00 0.00 1.85
3105 3249 7.920682 GTCATGCGATATTGAAAACCCTTTATT 59.079 33.333 0.00 0.00 0.00 1.40
3212 3356 2.005606 TTTGCCTGGCCTCTGTTGGA 62.006 55.000 17.53 0.00 0.00 3.53
3233 3377 6.228258 TGGAAACATATCCTCGTATTTAGCC 58.772 40.000 0.00 0.00 40.35 3.93
3247 3391 6.027749 CGTATTTAGCCAGGTGTTTCAAATC 58.972 40.000 0.00 0.00 0.00 2.17
3267 3411 8.197439 TCAAATCGCTTTGAGTAGATATCTTGA 58.803 33.333 11.25 0.29 44.46 3.02
3342 3486 6.754675 TGCACATATTCTTCTGCATCAAATTG 59.245 34.615 0.00 0.00 34.73 2.32
3485 3629 0.749649 AGATGCAAGCTCTACCTCCG 59.250 55.000 0.00 0.00 0.00 4.63
3503 3647 0.451783 CGTATTTGCCCAACCAGAGC 59.548 55.000 0.00 0.00 0.00 4.09
3581 3725 3.245371 TGGTTCTCCAGCAATTCCAGATT 60.245 43.478 0.00 0.00 39.03 2.40
3701 3845 6.822170 AGAACGACCTCTTCAACTTTTTAAGT 59.178 34.615 0.00 0.00 45.46 2.24
4254 4398 3.952535 ACTTGAAACTTGATCAACACGC 58.047 40.909 3.38 0.00 33.47 5.34
4264 4408 4.406648 TGATCAACACGCAATAGATCCT 57.593 40.909 0.00 0.00 35.42 3.24
4297 4441 5.186797 ACCTGTTGAGGATACAAGAGAAGAG 59.813 44.000 0.00 0.00 42.93 2.85
4350 4494 2.071778 ACAAACATGTCCAAGCCAGT 57.928 45.000 0.00 0.00 0.00 4.00
4414 4558 2.910319 AGGTGTACAGCCATCAGGTAAA 59.090 45.455 20.99 0.00 37.19 2.01
4567 4713 4.874396 GGAACGAAAATGTAGGGGAAGTAG 59.126 45.833 0.00 0.00 0.00 2.57
4569 4715 4.098894 ACGAAAATGTAGGGGAAGTAGGA 58.901 43.478 0.00 0.00 0.00 2.94
4570 4716 4.161754 ACGAAAATGTAGGGGAAGTAGGAG 59.838 45.833 0.00 0.00 0.00 3.69
4571 4717 4.161754 CGAAAATGTAGGGGAAGTAGGAGT 59.838 45.833 0.00 0.00 0.00 3.85
4572 4718 5.361857 CGAAAATGTAGGGGAAGTAGGAGTA 59.638 44.000 0.00 0.00 0.00 2.59
4574 4720 6.556974 AAATGTAGGGGAAGTAGGAGTAAC 57.443 41.667 0.00 0.00 0.00 2.50
4576 4722 5.280998 TGTAGGGGAAGTAGGAGTAACTT 57.719 43.478 0.00 0.00 39.84 2.66
4577 4723 5.021458 TGTAGGGGAAGTAGGAGTAACTTG 58.979 45.833 0.00 0.00 37.31 3.16
4582 4729 5.236282 GGGAAGTAGGAGTAACTTGTTGTC 58.764 45.833 0.00 0.00 37.31 3.18
4589 4739 5.602628 AGGAGTAACTTGTTGTCAGAGTTC 58.397 41.667 0.00 0.00 35.43 3.01
4616 4766 9.937175 GGAACTTCTAACAACAATTAGCATATC 57.063 33.333 0.00 0.00 32.99 1.63
4626 4776 6.791887 ACAATTAGCATATCGATTGACTGG 57.208 37.500 1.71 0.00 34.47 4.00
4657 4807 9.688592 GTAGTAAAGCTTCTTAACAGAACAGTA 57.311 33.333 0.00 0.00 33.80 2.74
4674 4824 4.164981 ACAGTAAACACATACTCCCTCCA 58.835 43.478 0.00 0.00 33.90 3.86
4759 4910 4.215908 TGGAGGGAGTACTGATGTATGAC 58.784 47.826 0.00 0.00 0.00 3.06
4927 5078 3.915437 AAAAACAAGGCCTGTATGACG 57.085 42.857 5.69 0.00 37.23 4.35
5092 5243 3.101643 TGGAGACTAAGCTCAGCCTTA 57.898 47.619 0.00 0.00 36.62 2.69
5287 5442 9.634163 GAACTGTATTGGTTTATTCCGAATTTT 57.366 29.630 0.00 0.00 0.00 1.82
5404 5566 4.294347 TGGGAACAAGAAAAGGGAAACAT 58.706 39.130 0.00 0.00 37.44 2.71
5470 5637 5.888161 GGAATTTCCTGTATGACATTGGTCT 59.112 40.000 8.25 0.00 38.02 3.85
5674 5892 0.250166 GTCCAAACGCCTGTACCAGT 60.250 55.000 0.00 0.00 0.00 4.00
5714 5936 7.728847 AGCCAAGTTTTATTCATCAAAAACC 57.271 32.000 6.97 0.00 43.43 3.27
5742 5964 4.649267 TGTGGGATACAATTCAGGTCAA 57.351 40.909 0.00 0.00 36.06 3.18
5778 6000 0.540365 AAACGTGACGTCCCTCCCTA 60.540 55.000 12.37 0.00 39.99 3.53
5781 6003 1.516423 GTGACGTCCCTCCCTAAGC 59.484 63.158 14.12 0.00 0.00 3.09
5793 6040 4.324719 CCCTCCCTAAGCGATAGAGAGTAT 60.325 50.000 9.22 0.00 35.32 2.12
5799 6046 4.946478 AAGCGATAGAGAGTATTTGGCT 57.054 40.909 0.00 0.00 39.76 4.75
5800 6047 6.151312 CCTAAGCGATAGAGAGTATTTGGCTA 59.849 42.308 1.61 0.00 39.76 3.93
5801 6048 6.406692 AAGCGATAGAGAGTATTTGGCTAA 57.593 37.500 0.00 0.00 39.76 3.09
5802 6049 6.019779 AGCGATAGAGAGTATTTGGCTAAG 57.980 41.667 0.00 0.00 39.76 2.18
5803 6050 4.623595 GCGATAGAGAGTATTTGGCTAAGC 59.376 45.833 0.00 0.00 39.76 3.09
5804 6051 5.773575 CGATAGAGAGTATTTGGCTAAGCA 58.226 41.667 0.00 0.00 39.76 3.91
5805 6052 6.216569 CGATAGAGAGTATTTGGCTAAGCAA 58.783 40.000 0.00 0.00 39.76 3.91
5806 6053 6.870965 CGATAGAGAGTATTTGGCTAAGCAAT 59.129 38.462 0.00 0.00 39.76 3.56
5807 6054 7.148672 CGATAGAGAGTATTTGGCTAAGCAATG 60.149 40.741 0.00 0.00 39.76 2.82
5808 6055 5.749462 AGAGAGTATTTGGCTAAGCAATGT 58.251 37.500 0.00 0.00 0.00 2.71
5809 6056 5.587844 AGAGAGTATTTGGCTAAGCAATGTG 59.412 40.000 0.00 0.00 0.00 3.21
5810 6057 4.096984 AGAGTATTTGGCTAAGCAATGTGC 59.903 41.667 0.00 0.00 45.46 4.57
5823 6070 3.971150 GCAATGTGCGATAGAGAGTACT 58.029 45.455 0.00 0.00 39.76 2.73
5824 6071 4.363999 GCAATGTGCGATAGAGAGTACTT 58.636 43.478 0.00 0.00 39.76 2.24
5825 6072 4.208047 GCAATGTGCGATAGAGAGTACTTG 59.792 45.833 0.00 0.00 39.76 3.16
5826 6073 4.576216 ATGTGCGATAGAGAGTACTTGG 57.424 45.455 0.00 0.00 39.76 3.61
5827 6074 3.353557 TGTGCGATAGAGAGTACTTGGT 58.646 45.455 0.00 0.00 39.76 3.67
5868 6115 6.526674 GGTATTTACCGCATGACTTTCAAAAG 59.473 38.462 0.00 0.97 38.06 2.27
5944 6198 6.418057 TCCAAATTTGCCACTGTTCTAATT 57.582 33.333 12.92 0.00 0.00 1.40
5970 6226 5.756734 ACACTGTTGTTTGGAATCCGAAGG 61.757 45.833 1.35 0.00 41.50 3.46
5981 6237 4.082523 CCGAAGGCCTCTCCGCAA 62.083 66.667 5.23 0.00 46.14 4.85
5982 6238 2.510238 CGAAGGCCTCTCCGCAAG 60.510 66.667 5.23 0.00 40.77 4.01
5983 6239 2.982130 GAAGGCCTCTCCGCAAGA 59.018 61.111 5.23 0.00 40.77 3.02
6016 6272 2.999507 TGTCGAAAGAGACTCTCTGC 57.000 50.000 9.44 4.52 40.28 4.26
6017 6273 1.542030 TGTCGAAAGAGACTCTCTGCC 59.458 52.381 9.44 4.01 40.28 4.85
6018 6274 1.135228 GTCGAAAGAGACTCTCTGCCC 60.135 57.143 9.44 1.73 40.28 5.36
6019 6275 0.891373 CGAAAGAGACTCTCTGCCCA 59.109 55.000 9.44 0.00 40.28 5.36
6020 6276 1.135141 CGAAAGAGACTCTCTGCCCAG 60.135 57.143 9.44 0.00 40.28 4.45
6021 6277 1.899142 GAAAGAGACTCTCTGCCCAGT 59.101 52.381 9.44 0.00 40.28 4.00
6022 6278 1.265236 AAGAGACTCTCTGCCCAGTG 58.735 55.000 9.44 0.00 40.28 3.66
6023 6279 0.614415 AGAGACTCTCTGCCCAGTGG 60.614 60.000 7.84 0.63 39.62 4.00
6024 6280 0.613292 GAGACTCTCTGCCCAGTGGA 60.613 60.000 11.95 0.00 0.00 4.02
6025 6281 0.042431 AGACTCTCTGCCCAGTGGAT 59.958 55.000 11.95 0.00 0.00 3.41
6026 6282 0.908198 GACTCTCTGCCCAGTGGATT 59.092 55.000 11.95 0.00 0.00 3.01
6027 6283 1.280421 GACTCTCTGCCCAGTGGATTT 59.720 52.381 11.95 0.00 0.00 2.17
6028 6284 1.004044 ACTCTCTGCCCAGTGGATTTG 59.996 52.381 11.95 0.00 0.00 2.32
6029 6285 0.322816 TCTCTGCCCAGTGGATTTGC 60.323 55.000 11.95 5.90 0.00 3.68
6030 6286 1.304381 TCTGCCCAGTGGATTTGCC 60.304 57.895 11.95 0.00 37.10 4.52
6031 6287 1.607178 CTGCCCAGTGGATTTGCCA 60.607 57.895 11.95 0.00 46.96 4.92
6041 6297 2.247358 TGGATTTGCCAGAAAAGACCC 58.753 47.619 0.00 0.00 43.33 4.46
6042 6298 1.550524 GGATTTGCCAGAAAAGACCCC 59.449 52.381 0.00 0.00 36.34 4.95
6043 6299 1.550524 GATTTGCCAGAAAAGACCCCC 59.449 52.381 0.00 0.00 0.00 5.40
6044 6300 0.560688 TTTGCCAGAAAAGACCCCCT 59.439 50.000 0.00 0.00 0.00 4.79
6045 6301 0.560688 TTGCCAGAAAAGACCCCCTT 59.439 50.000 0.00 0.00 36.47 3.95
6046 6302 0.112412 TGCCAGAAAAGACCCCCTTC 59.888 55.000 0.00 0.00 33.02 3.46
6047 6303 0.960861 GCCAGAAAAGACCCCCTTCG 60.961 60.000 0.00 0.00 33.02 3.79
6048 6304 0.322546 CCAGAAAAGACCCCCTTCGG 60.323 60.000 0.00 0.00 33.02 4.30
6049 6305 0.690762 CAGAAAAGACCCCCTTCGGA 59.309 55.000 0.00 0.00 33.02 4.55
6050 6306 0.691332 AGAAAAGACCCCCTTCGGAC 59.309 55.000 0.00 0.00 33.02 4.79
6051 6307 0.672711 GAAAAGACCCCCTTCGGACG 60.673 60.000 0.00 0.00 33.02 4.79
6052 6308 2.743126 AAAAGACCCCCTTCGGACGC 62.743 60.000 0.00 0.00 33.02 5.19
6054 6310 4.011517 GACCCCCTTCGGACGCAA 62.012 66.667 0.00 0.00 0.00 4.85
6055 6311 3.325201 GACCCCCTTCGGACGCAAT 62.325 63.158 0.00 0.00 0.00 3.56
6056 6312 2.045340 CCCCCTTCGGACGCAATT 60.045 61.111 0.00 0.00 0.00 2.32
6057 6313 2.406616 CCCCCTTCGGACGCAATTG 61.407 63.158 0.00 0.00 0.00 2.32
6058 6314 1.376683 CCCCTTCGGACGCAATTGA 60.377 57.895 10.34 0.00 0.00 2.57
6059 6315 1.644786 CCCCTTCGGACGCAATTGAC 61.645 60.000 10.34 0.00 0.00 3.18
6060 6316 0.953471 CCCTTCGGACGCAATTGACA 60.953 55.000 10.34 0.00 0.00 3.58
6061 6317 0.871722 CCTTCGGACGCAATTGACAA 59.128 50.000 10.34 0.00 0.00 3.18
6062 6318 1.265635 CCTTCGGACGCAATTGACAAA 59.734 47.619 10.34 0.00 0.00 2.83
6063 6319 2.287308 CCTTCGGACGCAATTGACAAAA 60.287 45.455 10.34 0.00 0.00 2.44
6064 6320 3.367607 CTTCGGACGCAATTGACAAAAA 58.632 40.909 10.34 0.00 0.00 1.94
6065 6321 2.993545 TCGGACGCAATTGACAAAAAG 58.006 42.857 10.34 0.00 0.00 2.27
6066 6322 2.050691 CGGACGCAATTGACAAAAAGG 58.949 47.619 10.34 0.00 0.00 3.11
6067 6323 2.287308 CGGACGCAATTGACAAAAAGGA 60.287 45.455 10.34 0.00 0.00 3.36
6068 6324 3.049912 GGACGCAATTGACAAAAAGGAC 58.950 45.455 10.34 0.00 0.00 3.85
6069 6325 3.049912 GACGCAATTGACAAAAAGGACC 58.950 45.455 10.34 0.00 0.00 4.46
6070 6326 2.223947 ACGCAATTGACAAAAAGGACCC 60.224 45.455 10.34 0.00 0.00 4.46
6071 6327 2.766313 GCAATTGACAAAAAGGACCCC 58.234 47.619 10.34 0.00 0.00 4.95
6072 6328 2.549992 GCAATTGACAAAAAGGACCCCC 60.550 50.000 10.34 0.00 0.00 5.40
6074 6330 2.375014 TTGACAAAAAGGACCCCCTC 57.625 50.000 0.00 0.00 43.48 4.30
6075 6331 1.227249 TGACAAAAAGGACCCCCTCA 58.773 50.000 0.00 0.00 43.48 3.86
6076 6332 1.786441 TGACAAAAAGGACCCCCTCAT 59.214 47.619 0.00 0.00 43.48 2.90
6077 6333 2.225017 TGACAAAAAGGACCCCCTCATC 60.225 50.000 0.00 0.00 43.48 2.92
6078 6334 1.077169 ACAAAAAGGACCCCCTCATCC 59.923 52.381 0.00 0.00 43.48 3.51
6079 6335 0.331616 AAAAAGGACCCCCTCATCCG 59.668 55.000 0.00 0.00 43.48 4.18
6080 6336 0.845102 AAAAGGACCCCCTCATCCGT 60.845 55.000 0.00 0.00 43.48 4.69
6081 6337 1.562672 AAAGGACCCCCTCATCCGTG 61.563 60.000 0.00 0.00 43.48 4.94
6082 6338 3.480133 GGACCCCCTCATCCGTGG 61.480 72.222 0.00 0.00 0.00 4.94
6083 6339 4.176752 GACCCCCTCATCCGTGGC 62.177 72.222 0.00 0.00 0.00 5.01
6155 6411 3.292159 GCGGGGCAGAACGGTTTT 61.292 61.111 0.00 0.00 0.00 2.43
6156 6412 2.951458 CGGGGCAGAACGGTTTTC 59.049 61.111 0.00 0.00 0.00 2.29
6157 6413 2.622962 CGGGGCAGAACGGTTTTCC 61.623 63.158 0.00 0.00 0.00 3.13
6167 6423 2.335011 GGTTTTCCGCACAGTGGC 59.665 61.111 1.84 0.00 32.51 5.01
6175 6431 2.742372 GCACAGTGGCGTACCTGG 60.742 66.667 1.84 0.00 36.63 4.45
6176 6432 2.047274 CACAGTGGCGTACCTGGG 60.047 66.667 0.00 0.00 36.63 4.45
6177 6433 2.203728 ACAGTGGCGTACCTGGGA 60.204 61.111 0.00 0.00 36.63 4.37
6178 6434 2.264794 CAGTGGCGTACCTGGGAC 59.735 66.667 0.00 0.00 36.63 4.46
6179 6435 3.379445 AGTGGCGTACCTGGGACG 61.379 66.667 26.87 26.87 43.19 4.79
6180 6436 4.446413 GTGGCGTACCTGGGACGG 62.446 72.222 31.00 14.20 40.66 4.79
6181 6437 4.682334 TGGCGTACCTGGGACGGA 62.682 66.667 31.00 0.00 40.66 4.69
6182 6438 3.384532 GGCGTACCTGGGACGGAA 61.385 66.667 31.00 0.00 40.66 4.30
6183 6439 2.125793 GCGTACCTGGGACGGAAC 60.126 66.667 31.00 12.44 40.66 3.62
6196 6452 4.506255 GGAACGGGCCAGGGGATG 62.506 72.222 8.08 0.00 0.00 3.51
6197 6453 3.728373 GAACGGGCCAGGGGATGT 61.728 66.667 8.08 0.00 0.00 3.06
6198 6454 3.995506 GAACGGGCCAGGGGATGTG 62.996 68.421 8.08 0.00 0.00 3.21
6204 6460 3.432335 CCAGGGGATGTGGGCCAT 61.432 66.667 10.70 0.00 36.13 4.40
6205 6461 2.123597 CAGGGGATGTGGGCCATG 60.124 66.667 10.70 0.00 32.56 3.66
6206 6462 4.147587 AGGGGATGTGGGCCATGC 62.148 66.667 10.70 0.00 40.91 4.06
6260 6516 4.410400 CTCCCTGGCCGACAACCC 62.410 72.222 0.00 0.00 0.00 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.895607 ATTTTGTTCGTGTTTCCGATTTTT 57.104 29.167 0.00 0.00 36.62 1.94
2 3 6.895607 AATTTTGTTCGTGTTTCCGATTTT 57.104 29.167 0.00 0.00 36.62 1.82
3 4 6.895607 AAATTTTGTTCGTGTTTCCGATTT 57.104 29.167 0.00 0.00 36.62 2.17
4 5 7.988904 TTAAATTTTGTTCGTGTTTCCGATT 57.011 28.000 0.00 0.00 36.62 3.34
5 6 7.988904 TTTAAATTTTGTTCGTGTTTCCGAT 57.011 28.000 0.00 0.00 36.62 4.18
6 7 7.807687 TTTTAAATTTTGTTCGTGTTTCCGA 57.192 28.000 0.00 0.00 34.52 4.55
7 8 9.479278 AAATTTTAAATTTTGTTCGTGTTTCCG 57.521 25.926 9.58 0.00 0.00 4.30
93 94 9.981114 TCTTTTGTCTTTTCTGTTCTTTTTCTT 57.019 25.926 0.00 0.00 0.00 2.52
94 95 9.981114 TTCTTTTGTCTTTTCTGTTCTTTTTCT 57.019 25.926 0.00 0.00 0.00 2.52
96 97 9.208022 CCTTCTTTTGTCTTTTCTGTTCTTTTT 57.792 29.630 0.00 0.00 0.00 1.94
97 98 8.585018 TCCTTCTTTTGTCTTTTCTGTTCTTTT 58.415 29.630 0.00 0.00 0.00 2.27
98 99 8.122472 TCCTTCTTTTGTCTTTTCTGTTCTTT 57.878 30.769 0.00 0.00 0.00 2.52
99 100 7.703058 TCCTTCTTTTGTCTTTTCTGTTCTT 57.297 32.000 0.00 0.00 0.00 2.52
100 101 7.703058 TTCCTTCTTTTGTCTTTTCTGTTCT 57.297 32.000 0.00 0.00 0.00 3.01
101 102 8.757164 TTTTCCTTCTTTTGTCTTTTCTGTTC 57.243 30.769 0.00 0.00 0.00 3.18
124 125 8.581253 TTCTCTGTCTTTTTCTCTTCCTTTTT 57.419 30.769 0.00 0.00 0.00 1.94
125 126 8.581253 TTTCTCTGTCTTTTTCTCTTCCTTTT 57.419 30.769 0.00 0.00 0.00 2.27
126 127 8.581253 TTTTCTCTGTCTTTTTCTCTTCCTTT 57.419 30.769 0.00 0.00 0.00 3.11
127 128 8.581253 TTTTTCTCTGTCTTTTTCTCTTCCTT 57.419 30.769 0.00 0.00 0.00 3.36
149 150 1.834896 ACTGGCTTTTTCGGGGTTTTT 59.165 42.857 0.00 0.00 0.00 1.94
150 151 1.491668 ACTGGCTTTTTCGGGGTTTT 58.508 45.000 0.00 0.00 0.00 2.43
151 152 2.158579 TCTACTGGCTTTTTCGGGGTTT 60.159 45.455 0.00 0.00 0.00 3.27
152 153 1.422402 TCTACTGGCTTTTTCGGGGTT 59.578 47.619 0.00 0.00 0.00 4.11
153 154 1.061546 TCTACTGGCTTTTTCGGGGT 58.938 50.000 0.00 0.00 0.00 4.95
154 155 2.084546 CTTCTACTGGCTTTTTCGGGG 58.915 52.381 0.00 0.00 0.00 5.73
155 156 3.053831 TCTTCTACTGGCTTTTTCGGG 57.946 47.619 0.00 0.00 0.00 5.14
156 157 5.432885 TTTTCTTCTACTGGCTTTTTCGG 57.567 39.130 0.00 0.00 0.00 4.30
157 158 8.902735 GTTTATTTTCTTCTACTGGCTTTTTCG 58.097 33.333 0.00 0.00 0.00 3.46
158 159 9.744468 TGTTTATTTTCTTCTACTGGCTTTTTC 57.256 29.630 0.00 0.00 0.00 2.29
159 160 9.750125 CTGTTTATTTTCTTCTACTGGCTTTTT 57.250 29.630 0.00 0.00 0.00 1.94
160 161 9.131791 TCTGTTTATTTTCTTCTACTGGCTTTT 57.868 29.630 0.00 0.00 0.00 2.27
161 162 8.691661 TCTGTTTATTTTCTTCTACTGGCTTT 57.308 30.769 0.00 0.00 0.00 3.51
162 163 8.691661 TTCTGTTTATTTTCTTCTACTGGCTT 57.308 30.769 0.00 0.00 0.00 4.35
163 164 8.691661 TTTCTGTTTATTTTCTTCTACTGGCT 57.308 30.769 0.00 0.00 0.00 4.75
164 165 9.914131 ATTTTCTGTTTATTTTCTTCTACTGGC 57.086 29.630 0.00 0.00 0.00 4.85
170 171 9.147732 ACCTGGATTTTCTGTTTATTTTCTTCT 57.852 29.630 0.00 0.00 0.00 2.85
171 172 9.764363 AACCTGGATTTTCTGTTTATTTTCTTC 57.236 29.630 0.00 0.00 0.00 2.87
172 173 9.764363 GAACCTGGATTTTCTGTTTATTTTCTT 57.236 29.630 0.00 0.00 0.00 2.52
173 174 9.147732 AGAACCTGGATTTTCTGTTTATTTTCT 57.852 29.630 0.00 0.00 30.65 2.52
174 175 9.196552 CAGAACCTGGATTTTCTGTTTATTTTC 57.803 33.333 14.30 0.00 42.54 2.29
192 193 4.826274 TCTAGATGGTTTCCAGAACCTG 57.174 45.455 9.15 0.00 40.88 4.00
193 194 4.226168 CCTTCTAGATGGTTTCCAGAACCT 59.774 45.833 15.11 0.00 40.88 3.50
194 195 4.019231 ACCTTCTAGATGGTTTCCAGAACC 60.019 45.833 21.63 1.05 36.75 3.62
195 196 5.167303 ACCTTCTAGATGGTTTCCAGAAC 57.833 43.478 21.63 0.00 36.75 3.01
196 197 5.280521 GGAACCTTCTAGATGGTTTCCAGAA 60.281 44.000 32.44 0.77 40.55 3.02
197 198 4.225267 GGAACCTTCTAGATGGTTTCCAGA 59.775 45.833 32.44 0.00 40.55 3.86
198 199 4.518249 GGAACCTTCTAGATGGTTTCCAG 58.482 47.826 32.44 9.99 40.55 3.86
199 200 4.569719 GGAACCTTCTAGATGGTTTCCA 57.430 45.455 32.44 0.87 40.55 3.53
216 217 0.031585 GAGCAACCGGTTTTGGGAAC 59.968 55.000 19.55 1.23 0.00 3.62
217 218 1.110518 GGAGCAACCGGTTTTGGGAA 61.111 55.000 19.55 0.00 0.00 3.97
218 219 1.529713 GGAGCAACCGGTTTTGGGA 60.530 57.895 19.55 0.00 0.00 4.37
219 220 2.570284 GGGAGCAACCGGTTTTGGG 61.570 63.158 19.55 7.65 40.11 4.12
220 221 1.830408 TGGGAGCAACCGGTTTTGG 60.830 57.895 19.55 8.07 40.11 3.28
221 222 1.106944 AGTGGGAGCAACCGGTTTTG 61.107 55.000 19.55 9.90 40.11 2.44
222 223 1.106944 CAGTGGGAGCAACCGGTTTT 61.107 55.000 19.55 9.20 40.11 2.43
223 224 1.528309 CAGTGGGAGCAACCGGTTT 60.528 57.895 19.55 3.54 40.11 3.27
224 225 2.113139 CAGTGGGAGCAACCGGTT 59.887 61.111 15.86 15.86 40.11 4.44
225 226 3.168528 ACAGTGGGAGCAACCGGT 61.169 61.111 0.00 0.00 40.11 5.28
226 227 2.469465 ATCACAGTGGGAGCAACCGG 62.469 60.000 0.00 0.00 40.11 5.28
227 228 1.003355 ATCACAGTGGGAGCAACCG 60.003 57.895 0.00 0.00 40.11 4.44
228 229 0.962356 CCATCACAGTGGGAGCAACC 60.962 60.000 0.00 0.00 35.55 3.77
229 230 0.250901 ACCATCACAGTGGGAGCAAC 60.251 55.000 0.00 0.00 43.77 4.17
230 231 0.036732 GACCATCACAGTGGGAGCAA 59.963 55.000 0.00 0.00 43.77 3.91
231 232 1.126948 TGACCATCACAGTGGGAGCA 61.127 55.000 0.00 0.00 43.77 4.26
232 233 0.674895 GTGACCATCACAGTGGGAGC 60.675 60.000 0.00 0.00 46.22 4.70
233 234 3.540211 GTGACCATCACAGTGGGAG 57.460 57.895 0.00 0.00 46.22 4.30
241 242 2.607187 CACTTAGACCGTGACCATCAC 58.393 52.381 0.00 0.00 43.65 3.06
242 243 1.548719 CCACTTAGACCGTGACCATCA 59.451 52.381 0.00 0.00 34.35 3.07
243 244 1.134788 CCCACTTAGACCGTGACCATC 60.135 57.143 0.00 0.00 34.35 3.51
244 245 0.902531 CCCACTTAGACCGTGACCAT 59.097 55.000 0.00 0.00 34.35 3.55
245 246 1.823169 GCCCACTTAGACCGTGACCA 61.823 60.000 0.00 0.00 34.35 4.02
246 247 1.079336 GCCCACTTAGACCGTGACC 60.079 63.158 0.00 0.00 34.35 4.02
247 248 1.079336 GGCCCACTTAGACCGTGAC 60.079 63.158 0.00 0.00 34.35 3.67
248 249 2.642254 CGGCCCACTTAGACCGTGA 61.642 63.158 0.00 0.00 40.77 4.35
249 250 2.125673 CGGCCCACTTAGACCGTG 60.126 66.667 0.00 0.00 40.77 4.94
250 251 3.387947 CCGGCCCACTTAGACCGT 61.388 66.667 0.00 0.00 44.14 4.83
251 252 4.832608 GCCGGCCCACTTAGACCG 62.833 72.222 18.11 0.00 45.21 4.79
252 253 4.484872 GGCCGGCCCACTTAGACC 62.485 72.222 36.64 5.01 0.00 3.85
263 264 4.864334 CAGTGGATCTGGGCCGGC 62.864 72.222 21.18 21.18 40.23 6.13
270 271 0.099613 CGACTCGACCAGTGGATCTG 59.900 60.000 18.40 5.83 43.27 2.90
271 272 0.322636 ACGACTCGACCAGTGGATCT 60.323 55.000 18.40 0.00 34.41 2.75
272 273 0.526662 AACGACTCGACCAGTGGATC 59.473 55.000 18.40 8.88 34.41 3.36
273 274 0.243907 CAACGACTCGACCAGTGGAT 59.756 55.000 18.40 0.00 34.41 3.41
274 275 1.658114 CAACGACTCGACCAGTGGA 59.342 57.895 18.40 0.00 34.41 4.02
275 276 1.372997 CCAACGACTCGACCAGTGG 60.373 63.158 7.91 7.91 34.41 4.00
276 277 2.022129 GCCAACGACTCGACCAGTG 61.022 63.158 5.20 0.00 34.41 3.66
277 278 1.745320 AAGCCAACGACTCGACCAGT 61.745 55.000 5.20 0.00 38.45 4.00
278 279 1.006102 AAGCCAACGACTCGACCAG 60.006 57.895 5.20 0.00 0.00 4.00
279 280 1.300620 CAAGCCAACGACTCGACCA 60.301 57.895 5.20 0.00 0.00 4.02
280 281 1.300697 ACAAGCCAACGACTCGACC 60.301 57.895 5.20 0.00 0.00 4.79
281 282 1.853319 CACAAGCCAACGACTCGAC 59.147 57.895 5.20 0.00 0.00 4.20
282 283 1.954146 GCACAAGCCAACGACTCGA 60.954 57.895 5.20 0.00 33.58 4.04
283 284 2.551270 GCACAAGCCAACGACTCG 59.449 61.111 0.00 0.00 33.58 4.18
284 285 1.772063 AACGCACAAGCCAACGACTC 61.772 55.000 0.00 0.00 37.52 3.36
285 286 1.817941 AACGCACAAGCCAACGACT 60.818 52.632 0.00 0.00 37.52 4.18
286 287 1.654137 CAACGCACAAGCCAACGAC 60.654 57.895 0.00 0.00 37.52 4.34
287 288 2.712539 CAACGCACAAGCCAACGA 59.287 55.556 0.00 0.00 37.52 3.85
288 289 3.024043 GCAACGCACAAGCCAACG 61.024 61.111 0.00 0.00 37.52 4.10
289 290 3.024043 CGCAACGCACAAGCCAAC 61.024 61.111 0.00 0.00 37.52 3.77
290 291 3.462333 GACGCAACGCACAAGCCAA 62.462 57.895 0.00 0.00 37.52 4.52
291 292 3.947841 GACGCAACGCACAAGCCA 61.948 61.111 0.00 0.00 37.52 4.75
293 294 3.995669 TCGACGCAACGCACAAGC 61.996 61.111 0.00 0.00 37.42 4.01
294 295 2.128128 GTCGACGCAACGCACAAG 60.128 61.111 0.00 0.00 0.00 3.16
295 296 1.767127 AATGTCGACGCAACGCACAA 61.767 50.000 11.62 0.00 31.61 3.33
296 297 1.767127 AAATGTCGACGCAACGCACA 61.767 50.000 11.62 0.00 0.00 4.57
297 298 1.052768 GAAATGTCGACGCAACGCAC 61.053 55.000 11.62 0.00 0.00 5.34
298 299 1.203065 GAAATGTCGACGCAACGCA 59.797 52.632 11.62 0.00 0.00 5.24
299 300 4.021734 GAAATGTCGACGCAACGC 57.978 55.556 11.62 0.00 0.00 4.84
308 309 2.369600 GCTCATTGCATCGAAATGTCG 58.630 47.619 0.00 0.00 44.44 4.35
309 310 2.369600 CGCTCATTGCATCGAAATGTC 58.630 47.619 7.90 2.36 43.06 3.06
310 311 1.064505 CCGCTCATTGCATCGAAATGT 59.935 47.619 7.90 0.00 43.06 2.71
311 312 1.750351 CCGCTCATTGCATCGAAATG 58.250 50.000 2.49 2.49 43.06 2.32
312 313 0.029834 GCCGCTCATTGCATCGAAAT 59.970 50.000 0.00 0.00 43.06 2.17
313 314 1.429021 GCCGCTCATTGCATCGAAA 59.571 52.632 0.00 0.00 43.06 3.46
314 315 2.812122 CGCCGCTCATTGCATCGAA 61.812 57.895 0.00 0.00 43.06 3.71
315 316 3.264159 CGCCGCTCATTGCATCGA 61.264 61.111 0.00 0.00 43.06 3.59
316 317 2.109538 ATTCGCCGCTCATTGCATCG 62.110 55.000 0.00 0.00 43.06 3.84
317 318 0.867746 TATTCGCCGCTCATTGCATC 59.132 50.000 0.00 0.00 43.06 3.91
318 319 0.870393 CTATTCGCCGCTCATTGCAT 59.130 50.000 0.00 0.00 43.06 3.96
319 320 1.159713 CCTATTCGCCGCTCATTGCA 61.160 55.000 0.00 0.00 43.06 4.08
320 321 0.880278 TCCTATTCGCCGCTCATTGC 60.880 55.000 0.00 0.00 38.57 3.56
321 322 1.581934 TTCCTATTCGCCGCTCATTG 58.418 50.000 0.00 0.00 0.00 2.82
322 323 2.325583 TTTCCTATTCGCCGCTCATT 57.674 45.000 0.00 0.00 0.00 2.57
323 324 2.550830 ATTTCCTATTCGCCGCTCAT 57.449 45.000 0.00 0.00 0.00 2.90
324 325 2.750948 GTATTTCCTATTCGCCGCTCA 58.249 47.619 0.00 0.00 0.00 4.26
325 326 1.719780 CGTATTTCCTATTCGCCGCTC 59.280 52.381 0.00 0.00 0.00 5.03
326 327 1.604693 CCGTATTTCCTATTCGCCGCT 60.605 52.381 0.00 0.00 0.00 5.52
327 328 0.788391 CCGTATTTCCTATTCGCCGC 59.212 55.000 0.00 0.00 0.00 6.53
328 329 2.144482 ACCGTATTTCCTATTCGCCG 57.856 50.000 0.00 0.00 0.00 6.46
329 330 5.052481 ACTAAACCGTATTTCCTATTCGCC 58.948 41.667 0.00 0.00 0.00 5.54
330 331 6.594284 AACTAAACCGTATTTCCTATTCGC 57.406 37.500 0.00 0.00 0.00 4.70
331 332 9.688592 ATCTAACTAAACCGTATTTCCTATTCG 57.311 33.333 0.00 0.00 0.00 3.34
333 334 9.774413 CCATCTAACTAAACCGTATTTCCTATT 57.226 33.333 0.00 0.00 0.00 1.73
334 335 9.151177 TCCATCTAACTAAACCGTATTTCCTAT 57.849 33.333 0.00 0.00 0.00 2.57
335 336 8.537728 TCCATCTAACTAAACCGTATTTCCTA 57.462 34.615 0.00 0.00 0.00 2.94
336 337 7.427989 TCCATCTAACTAAACCGTATTTCCT 57.572 36.000 0.00 0.00 0.00 3.36
337 338 7.254692 GCTTCCATCTAACTAAACCGTATTTCC 60.255 40.741 0.00 0.00 0.00 3.13
338 339 7.279313 TGCTTCCATCTAACTAAACCGTATTTC 59.721 37.037 0.00 0.00 0.00 2.17
339 340 7.107542 TGCTTCCATCTAACTAAACCGTATTT 58.892 34.615 0.00 0.00 0.00 1.40
340 341 6.646267 TGCTTCCATCTAACTAAACCGTATT 58.354 36.000 0.00 0.00 0.00 1.89
341 342 6.229936 TGCTTCCATCTAACTAAACCGTAT 57.770 37.500 0.00 0.00 0.00 3.06
342 343 5.657474 CTGCTTCCATCTAACTAAACCGTA 58.343 41.667 0.00 0.00 0.00 4.02
343 344 4.504858 CTGCTTCCATCTAACTAAACCGT 58.495 43.478 0.00 0.00 0.00 4.83
344 345 3.309954 GCTGCTTCCATCTAACTAAACCG 59.690 47.826 0.00 0.00 0.00 4.44
345 346 3.628032 GGCTGCTTCCATCTAACTAAACC 59.372 47.826 0.00 0.00 0.00 3.27
346 347 3.628032 GGGCTGCTTCCATCTAACTAAAC 59.372 47.826 0.00 0.00 0.00 2.01
347 348 3.681594 CGGGCTGCTTCCATCTAACTAAA 60.682 47.826 0.00 0.00 0.00 1.85
348 349 2.158957 CGGGCTGCTTCCATCTAACTAA 60.159 50.000 0.00 0.00 0.00 2.24
349 350 1.412710 CGGGCTGCTTCCATCTAACTA 59.587 52.381 0.00 0.00 0.00 2.24
350 351 0.179000 CGGGCTGCTTCCATCTAACT 59.821 55.000 0.00 0.00 0.00 2.24
351 352 0.107654 ACGGGCTGCTTCCATCTAAC 60.108 55.000 0.00 0.00 0.00 2.34
352 353 1.491668 TACGGGCTGCTTCCATCTAA 58.508 50.000 0.00 0.00 0.00 2.10
353 354 1.491668 TTACGGGCTGCTTCCATCTA 58.508 50.000 0.00 0.00 0.00 1.98
354 355 0.618458 TTTACGGGCTGCTTCCATCT 59.382 50.000 0.00 0.00 0.00 2.90
355 356 1.401905 CTTTTACGGGCTGCTTCCATC 59.598 52.381 0.00 0.00 0.00 3.51
356 357 1.463674 CTTTTACGGGCTGCTTCCAT 58.536 50.000 0.00 0.00 0.00 3.41
357 358 1.241315 GCTTTTACGGGCTGCTTCCA 61.241 55.000 0.00 0.00 0.00 3.53
358 359 1.506718 GCTTTTACGGGCTGCTTCC 59.493 57.895 0.00 0.00 0.00 3.46
359 360 1.134694 CGCTTTTACGGGCTGCTTC 59.865 57.895 0.00 0.00 0.00 3.86
360 361 1.599797 ACGCTTTTACGGGCTGCTT 60.600 52.632 0.00 0.00 37.37 3.91
361 362 2.032071 ACGCTTTTACGGGCTGCT 59.968 55.556 0.00 0.00 37.37 4.24
362 363 1.293267 TACACGCTTTTACGGGCTGC 61.293 55.000 0.00 0.00 41.17 5.25
363 364 1.149987 TTACACGCTTTTACGGGCTG 58.850 50.000 0.00 0.00 41.17 4.85
364 365 1.532437 GTTTACACGCTTTTACGGGCT 59.468 47.619 0.00 0.00 41.17 5.19
365 366 1.263752 TGTTTACACGCTTTTACGGGC 59.736 47.619 0.00 0.00 41.17 6.13
366 367 2.663606 GCTGTTTACACGCTTTTACGGG 60.664 50.000 0.00 0.00 43.76 5.28
367 368 2.032722 TGCTGTTTACACGCTTTTACGG 60.033 45.455 0.00 0.00 37.37 4.02
368 369 2.962191 GTGCTGTTTACACGCTTTTACG 59.038 45.455 0.00 0.00 39.50 3.18
377 378 0.027063 AACGCACGTGCTGTTTACAC 59.973 50.000 35.27 6.46 39.32 2.90
378 379 0.727970 AAACGCACGTGCTGTTTACA 59.272 45.000 37.60 0.00 41.80 2.41
379 380 2.556806 CTAAACGCACGTGCTGTTTAC 58.443 47.619 37.27 17.26 42.67 2.01
380 381 1.070443 GCTAAACGCACGTGCTGTTTA 60.070 47.619 37.53 37.53 42.67 2.01
381 382 0.316689 GCTAAACGCACGTGCTGTTT 60.317 50.000 38.62 38.62 43.88 2.83
382 383 1.278637 GCTAAACGCACGTGCTGTT 59.721 52.632 35.27 32.73 38.61 3.16
383 384 1.885388 TGCTAAACGCACGTGCTGT 60.885 52.632 35.27 29.67 45.47 4.40
384 385 2.935191 TGCTAAACGCACGTGCTG 59.065 55.556 35.27 29.06 45.47 4.41
390 391 6.797852 TGGGACAAACAATGCTAAACGCAC 62.798 45.833 0.00 0.00 45.33 5.34
391 392 4.801406 TGGGACAAACAATGCTAAACGCA 61.801 43.478 0.00 0.00 46.35 5.24
392 393 2.287909 TGGGACAAACAATGCTAAACGC 60.288 45.455 0.00 0.00 34.88 4.84
393 394 3.305110 GTGGGACAAACAATGCTAAACG 58.695 45.455 0.00 0.00 44.16 3.60
394 395 3.003897 TCGTGGGACAAACAATGCTAAAC 59.996 43.478 0.00 0.00 44.16 2.01
395 396 3.215151 TCGTGGGACAAACAATGCTAAA 58.785 40.909 0.00 0.00 44.16 1.85
396 397 2.811431 CTCGTGGGACAAACAATGCTAA 59.189 45.455 0.00 0.00 44.16 3.09
397 398 2.422597 CTCGTGGGACAAACAATGCTA 58.577 47.619 0.00 0.00 44.16 3.49
398 399 1.238439 CTCGTGGGACAAACAATGCT 58.762 50.000 0.00 0.00 44.16 3.79
399 400 0.387239 GCTCGTGGGACAAACAATGC 60.387 55.000 0.00 0.00 44.16 3.56
400 401 0.950836 TGCTCGTGGGACAAACAATG 59.049 50.000 0.00 0.00 44.16 2.82
401 402 0.951558 GTGCTCGTGGGACAAACAAT 59.048 50.000 0.00 0.00 44.16 2.71
402 403 0.393132 TGTGCTCGTGGGACAAACAA 60.393 50.000 3.59 0.00 43.13 2.83
403 404 1.222113 TGTGCTCGTGGGACAAACA 59.778 52.632 3.59 0.00 43.13 2.83
404 405 4.134623 TGTGCTCGTGGGACAAAC 57.865 55.556 3.59 0.00 43.13 2.93
407 408 2.280797 GCTTGTGCTCGTGGGACA 60.281 61.111 2.18 2.18 44.36 4.02
408 409 2.280797 TGCTTGTGCTCGTGGGAC 60.281 61.111 0.00 0.00 40.48 4.46
409 410 2.280797 GTGCTTGTGCTCGTGGGA 60.281 61.111 0.00 0.00 40.48 4.37
410 411 3.357079 GGTGCTTGTGCTCGTGGG 61.357 66.667 0.00 0.00 40.48 4.61
411 412 3.357079 GGGTGCTTGTGCTCGTGG 61.357 66.667 0.00 0.00 40.48 4.94
412 413 2.281070 AGGGTGCTTGTGCTCGTG 60.281 61.111 0.00 0.00 40.48 4.35
413 414 2.281070 CAGGGTGCTTGTGCTCGT 60.281 61.111 0.00 0.00 40.48 4.18
414 415 2.281070 ACAGGGTGCTTGTGCTCG 60.281 61.111 0.00 0.00 40.48 5.03
415 416 3.348236 CACAGGGTGCTTGTGCTC 58.652 61.111 0.00 0.00 39.43 4.26
419 420 3.118261 CCAGATATACACAGGGTGCTTGT 60.118 47.826 0.00 0.00 36.98 3.16
420 421 3.470709 CCAGATATACACAGGGTGCTTG 58.529 50.000 0.00 0.00 36.98 4.01
421 422 2.158755 GCCAGATATACACAGGGTGCTT 60.159 50.000 0.00 0.00 36.98 3.91
422 423 1.417890 GCCAGATATACACAGGGTGCT 59.582 52.381 0.00 0.00 36.98 4.40
423 424 1.543429 GGCCAGATATACACAGGGTGC 60.543 57.143 0.00 0.00 36.98 5.01
424 425 1.768275 TGGCCAGATATACACAGGGTG 59.232 52.381 0.00 0.00 39.75 4.61
425 426 2.190398 TGGCCAGATATACACAGGGT 57.810 50.000 0.00 0.00 0.00 4.34
426 427 3.055094 GGTATGGCCAGATATACACAGGG 60.055 52.174 13.05 0.00 37.17 4.45
427 428 3.840666 AGGTATGGCCAGATATACACAGG 59.159 47.826 13.05 0.00 40.61 4.00
428 429 4.380973 CGAGGTATGGCCAGATATACACAG 60.381 50.000 13.05 0.04 40.61 3.66
429 430 3.509967 CGAGGTATGGCCAGATATACACA 59.490 47.826 13.05 0.00 40.61 3.72
430 431 3.119101 CCGAGGTATGGCCAGATATACAC 60.119 52.174 13.05 6.15 40.61 2.90
431 432 3.096852 CCGAGGTATGGCCAGATATACA 58.903 50.000 13.05 0.00 40.61 2.29
432 433 2.431057 CCCGAGGTATGGCCAGATATAC 59.569 54.545 13.05 8.77 40.61 1.47
433 434 2.313643 TCCCGAGGTATGGCCAGATATA 59.686 50.000 13.05 0.00 40.61 0.86
434 435 1.078823 TCCCGAGGTATGGCCAGATAT 59.921 52.381 13.05 0.00 40.61 1.63
435 436 0.485543 TCCCGAGGTATGGCCAGATA 59.514 55.000 13.05 0.00 40.61 1.98
436 437 1.122019 GTCCCGAGGTATGGCCAGAT 61.122 60.000 13.05 0.00 40.61 2.90
437 438 1.760875 GTCCCGAGGTATGGCCAGA 60.761 63.158 13.05 2.53 40.61 3.86
438 439 2.822399 GTCCCGAGGTATGGCCAG 59.178 66.667 13.05 0.00 40.61 4.85
439 440 3.151710 CGTCCCGAGGTATGGCCA 61.152 66.667 8.56 8.56 40.61 5.36
440 441 3.925090 CCGTCCCGAGGTATGGCC 61.925 72.222 0.00 0.00 37.58 5.36
441 442 3.925090 CCCGTCCCGAGGTATGGC 61.925 72.222 0.00 0.00 0.00 4.40
442 443 3.925090 GCCCGTCCCGAGGTATGG 61.925 72.222 0.00 0.00 0.00 2.74
443 444 3.925090 GGCCCGTCCCGAGGTATG 61.925 72.222 0.00 0.00 0.00 2.39
463 464 4.593864 CTAGGCCCGGCTCGAAGC 62.594 72.222 9.86 0.00 41.46 3.86
464 465 4.593864 GCTAGGCCCGGCTCGAAG 62.594 72.222 9.86 3.15 0.00 3.79
477 478 3.950794 TTGCGTCGGGCTTGGCTAG 62.951 63.158 0.00 0.00 44.05 3.42
478 479 3.538785 TTTGCGTCGGGCTTGGCTA 62.539 57.895 0.00 0.00 44.05 3.93
479 480 4.947147 TTTGCGTCGGGCTTGGCT 62.947 61.111 0.00 0.00 44.05 4.75
480 481 3.492311 TTTTTGCGTCGGGCTTGGC 62.492 57.895 0.00 0.00 44.05 4.52
481 482 2.725008 TTTTTGCGTCGGGCTTGG 59.275 55.556 0.00 0.00 44.05 3.61
495 496 2.600470 GCTCGGGCCTGGGTTTTT 60.600 61.111 14.54 0.00 0.00 1.94
528 529 2.325082 CCAGAAAACCGGCCTGACG 61.325 63.158 0.00 0.00 0.00 4.35
529 530 1.971695 CCCAGAAAACCGGCCTGAC 60.972 63.158 0.00 0.00 0.00 3.51
530 531 2.434331 CCCAGAAAACCGGCCTGA 59.566 61.111 0.00 0.00 0.00 3.86
531 532 3.373565 GCCCAGAAAACCGGCCTG 61.374 66.667 0.00 3.92 36.63 4.85
535 536 4.338710 TCGGGCCCAGAAAACCGG 62.339 66.667 24.92 0.00 45.97 5.28
537 538 3.062466 GCTCGGGCCCAGAAAACC 61.062 66.667 24.92 5.25 0.00 3.27
553 554 3.887335 TTACGTGTTCGGGCCAGGC 62.887 63.158 4.39 1.26 41.85 4.85
554 555 0.885596 TTTTACGTGTTCGGGCCAGG 60.886 55.000 4.39 0.00 41.85 4.45
555 556 0.515564 CTTTTACGTGTTCGGGCCAG 59.484 55.000 4.39 0.00 41.85 4.85
556 557 1.508808 GCTTTTACGTGTTCGGGCCA 61.509 55.000 4.39 0.00 41.85 5.36
557 558 1.208358 GCTTTTACGTGTTCGGGCC 59.792 57.895 0.00 0.00 41.85 5.80
558 559 1.208358 GGCTTTTACGTGTTCGGGC 59.792 57.895 0.00 0.00 41.85 6.13
559 560 1.871077 GGGCTTTTACGTGTTCGGG 59.129 57.895 0.00 0.00 41.85 5.14
560 561 1.223417 ACGGGCTTTTACGTGTTCGG 61.223 55.000 0.00 0.00 42.39 4.30
561 562 0.162294 GACGGGCTTTTACGTGTTCG 59.838 55.000 0.00 0.00 44.24 3.95
562 563 0.162294 CGACGGGCTTTTACGTGTTC 59.838 55.000 0.00 0.00 44.24 3.18
563 564 1.223417 CCGACGGGCTTTTACGTGTT 61.223 55.000 5.81 0.00 44.24 3.32
564 565 1.665599 CCGACGGGCTTTTACGTGT 60.666 57.895 5.81 0.00 44.24 4.49
565 566 2.385091 CCCGACGGGCTTTTACGTG 61.385 63.158 22.37 0.00 44.24 4.49
597 598 2.741486 TTTTCCTGAAGGACGGGCCG 62.741 60.000 27.06 27.06 45.39 6.13
598 599 1.074248 TTTTCCTGAAGGACGGGCC 59.926 57.895 0.00 0.00 45.39 5.80
599 600 1.574702 CGTTTTCCTGAAGGACGGGC 61.575 60.000 0.00 0.00 45.39 6.13
600 601 1.574702 GCGTTTTCCTGAAGGACGGG 61.575 60.000 15.05 0.00 45.39 5.28
601 602 0.882927 TGCGTTTTCCTGAAGGACGG 60.883 55.000 15.05 0.00 45.39 4.79
602 603 0.941542 TTGCGTTTTCCTGAAGGACG 59.058 50.000 0.00 1.64 45.39 4.79
603 604 3.430333 TTTTGCGTTTTCCTGAAGGAC 57.570 42.857 0.00 0.00 45.39 3.85
604 605 3.732471 CGTTTTTGCGTTTTCCTGAAGGA 60.732 43.478 0.00 0.00 43.73 3.36
605 606 2.533942 CGTTTTTGCGTTTTCCTGAAGG 59.466 45.455 0.00 0.00 0.00 3.46
606 607 3.430931 TCGTTTTTGCGTTTTCCTGAAG 58.569 40.909 0.00 0.00 0.00 3.02
607 608 3.489180 TCGTTTTTGCGTTTTCCTGAA 57.511 38.095 0.00 0.00 0.00 3.02
608 609 3.367607 CATCGTTTTTGCGTTTTCCTGA 58.632 40.909 0.00 0.00 0.00 3.86
609 610 2.470999 CCATCGTTTTTGCGTTTTCCTG 59.529 45.455 0.00 0.00 0.00 3.86
610 611 2.544903 CCCATCGTTTTTGCGTTTTCCT 60.545 45.455 0.00 0.00 0.00 3.36
611 612 1.790043 CCCATCGTTTTTGCGTTTTCC 59.210 47.619 0.00 0.00 0.00 3.13
612 613 1.191425 GCCCATCGTTTTTGCGTTTTC 59.809 47.619 0.00 0.00 0.00 2.29
613 614 1.213491 GCCCATCGTTTTTGCGTTTT 58.787 45.000 0.00 0.00 0.00 2.43
614 615 0.598942 GGCCCATCGTTTTTGCGTTT 60.599 50.000 0.00 0.00 0.00 3.60
615 616 1.006688 GGCCCATCGTTTTTGCGTT 60.007 52.632 0.00 0.00 0.00 4.84
616 617 2.648454 GGCCCATCGTTTTTGCGT 59.352 55.556 0.00 0.00 0.00 5.24
617 618 2.126110 GGGCCCATCGTTTTTGCG 60.126 61.111 19.95 0.00 0.00 4.85
618 619 2.126110 CGGGCCCATCGTTTTTGC 60.126 61.111 24.92 0.00 0.00 3.68
619 620 2.571231 CCGGGCCCATCGTTTTTG 59.429 61.111 24.92 0.78 0.00 2.44
620 621 2.678580 CCCGGGCCCATCGTTTTT 60.679 61.111 24.92 0.00 0.00 1.94
650 651 0.727398 GATTTTGAGCCCGAAGACCG 59.273 55.000 0.00 0.00 38.18 4.79
651 652 2.115343 AGATTTTGAGCCCGAAGACC 57.885 50.000 0.00 0.00 0.00 3.85
652 653 3.198872 CCTAGATTTTGAGCCCGAAGAC 58.801 50.000 0.00 0.00 0.00 3.01
653 654 2.420129 GCCTAGATTTTGAGCCCGAAGA 60.420 50.000 0.00 0.00 0.00 2.87
654 655 1.943340 GCCTAGATTTTGAGCCCGAAG 59.057 52.381 0.00 0.00 0.00 3.79
655 656 1.408266 GGCCTAGATTTTGAGCCCGAA 60.408 52.381 0.00 0.00 37.66 4.30
656 657 0.180406 GGCCTAGATTTTGAGCCCGA 59.820 55.000 0.00 0.00 37.66 5.14
657 658 2.707902 GGCCTAGATTTTGAGCCCG 58.292 57.895 0.00 0.00 37.66 6.13
659 660 0.180406 TCGGGCCTAGATTTTGAGCC 59.820 55.000 0.84 0.00 43.09 4.70
660 661 1.587547 CTCGGGCCTAGATTTTGAGC 58.412 55.000 0.84 0.00 0.00 4.26
661 662 1.587547 GCTCGGGCCTAGATTTTGAG 58.412 55.000 9.63 2.79 0.00 3.02
662 663 3.780624 GCTCGGGCCTAGATTTTGA 57.219 52.632 9.63 0.00 0.00 2.69
704 705 3.546714 AAAAGCCTGACCCGGTCCG 62.547 63.158 15.24 3.60 0.00 4.79
705 706 1.228459 AAAAAGCCTGACCCGGTCC 60.228 57.895 15.24 0.00 0.00 4.46
706 707 1.574702 CGAAAAAGCCTGACCCGGTC 61.575 60.000 10.96 10.96 0.00 4.79
707 708 1.599797 CGAAAAAGCCTGACCCGGT 60.600 57.895 0.00 0.00 0.00 5.28
708 709 2.332654 CCGAAAAAGCCTGACCCGG 61.333 63.158 0.00 0.00 0.00 5.73
709 710 2.332654 CCCGAAAAAGCCTGACCCG 61.333 63.158 0.00 0.00 0.00 5.28
710 711 2.636412 GCCCGAAAAAGCCTGACCC 61.636 63.158 0.00 0.00 0.00 4.46
711 712 2.636412 GGCCCGAAAAAGCCTGACC 61.636 63.158 0.00 0.00 46.14 4.02
712 713 2.962569 GGCCCGAAAAAGCCTGAC 59.037 61.111 0.00 0.00 46.14 3.51
750 751 1.227383 GGTTAGTCCTGGCCATGGG 59.773 63.158 15.13 4.96 0.00 4.00
751 752 1.227383 GGGTTAGTCCTGGCCATGG 59.773 63.158 5.51 7.63 36.25 3.66
752 753 2.311287 AGGGTTAGTCCTGGCCATG 58.689 57.895 5.51 2.84 35.47 3.66
753 754 4.942900 AGGGTTAGTCCTGGCCAT 57.057 55.556 5.51 0.00 35.47 4.40
759 760 1.119574 ACACGCACAGGGTTAGTCCT 61.120 55.000 0.00 0.00 37.71 3.85
760 761 0.604578 TACACGCACAGGGTTAGTCC 59.395 55.000 0.00 0.00 37.78 3.85
761 762 2.443887 TTACACGCACAGGGTTAGTC 57.556 50.000 0.00 0.00 37.78 2.59
762 763 2.762745 CTTTACACGCACAGGGTTAGT 58.237 47.619 0.00 0.00 37.78 2.24
763 764 1.463444 GCTTTACACGCACAGGGTTAG 59.537 52.381 0.00 0.00 37.78 2.34
764 765 1.515081 GCTTTACACGCACAGGGTTA 58.485 50.000 0.00 0.00 37.78 2.85
765 766 1.170290 GGCTTTACACGCACAGGGTT 61.170 55.000 0.00 0.00 37.78 4.11
775 776 4.462483 TGATCAAGGATTTGGGCTTTACAC 59.538 41.667 0.00 0.00 34.97 2.90
819 820 2.231721 GGCCGAGAGTTTACAGTCTCTT 59.768 50.000 11.11 0.00 44.62 2.85
820 821 1.819903 GGCCGAGAGTTTACAGTCTCT 59.180 52.381 11.11 0.00 44.62 3.10
1440 1476 3.372206 CGAAGTGCAATCAACTCTAAGGG 59.628 47.826 0.00 0.00 0.00 3.95
1447 1483 2.750948 ACGTACGAAGTGCAATCAACT 58.249 42.857 24.41 0.00 45.55 3.16
1537 1573 5.796424 AGAAAAACCATCTTCATTGCAGT 57.204 34.783 0.00 0.00 0.00 4.40
1557 1593 7.921041 ACCATCAATCTGTTAGATAGGAAGA 57.079 36.000 0.00 0.00 32.89 2.87
1796 1937 4.565652 GGTCCCTTGCTAACTTCTCAATCA 60.566 45.833 0.00 0.00 0.00 2.57
1811 1952 1.915141 AGCTGAAATGTGGTCCCTTG 58.085 50.000 0.00 0.00 0.00 3.61
1819 1960 5.556355 TGAGATGCTTTAGCTGAAATGTG 57.444 39.130 0.00 0.00 42.66 3.21
1990 2131 1.149174 ACCTTGCTGTGGTGTCCAG 59.851 57.895 0.00 0.00 36.30 3.86
2016 2157 7.944729 AAATTGCTCAATACTAAGTCCACAT 57.055 32.000 0.00 0.00 0.00 3.21
2018 2159 8.391106 CACTAAATTGCTCAATACTAAGTCCAC 58.609 37.037 0.00 0.00 0.00 4.02
2020 2161 8.494016 ACACTAAATTGCTCAATACTAAGTCC 57.506 34.615 0.00 0.00 0.00 3.85
2033 2174 9.696917 CCTTGAATCTTAAAACACTAAATTGCT 57.303 29.630 0.00 0.00 0.00 3.91
2036 2177 9.476202 GCACCTTGAATCTTAAAACACTAAATT 57.524 29.630 0.00 0.00 0.00 1.82
2037 2178 7.807907 CGCACCTTGAATCTTAAAACACTAAAT 59.192 33.333 0.00 0.00 0.00 1.40
2038 2179 7.136119 CGCACCTTGAATCTTAAAACACTAAA 58.864 34.615 0.00 0.00 0.00 1.85
2039 2180 6.261381 ACGCACCTTGAATCTTAAAACACTAA 59.739 34.615 0.00 0.00 0.00 2.24
2040 2181 5.761234 ACGCACCTTGAATCTTAAAACACTA 59.239 36.000 0.00 0.00 0.00 2.74
2041 2182 4.578928 ACGCACCTTGAATCTTAAAACACT 59.421 37.500 0.00 0.00 0.00 3.55
2042 2183 4.675114 CACGCACCTTGAATCTTAAAACAC 59.325 41.667 0.00 0.00 0.00 3.32
2043 2184 4.791411 GCACGCACCTTGAATCTTAAAACA 60.791 41.667 0.00 0.00 0.00 2.83
2044 2185 3.668656 GCACGCACCTTGAATCTTAAAAC 59.331 43.478 0.00 0.00 0.00 2.43
2045 2186 3.316588 TGCACGCACCTTGAATCTTAAAA 59.683 39.130 0.00 0.00 0.00 1.52
2046 2187 2.881513 TGCACGCACCTTGAATCTTAAA 59.118 40.909 0.00 0.00 0.00 1.52
2047 2188 2.499197 TGCACGCACCTTGAATCTTAA 58.501 42.857 0.00 0.00 0.00 1.85
2048 2189 2.177394 TGCACGCACCTTGAATCTTA 57.823 45.000 0.00 0.00 0.00 2.10
2049 2190 1.317613 TTGCACGCACCTTGAATCTT 58.682 45.000 0.00 0.00 0.00 2.40
2050 2191 1.200716 CATTGCACGCACCTTGAATCT 59.799 47.619 0.00 0.00 0.00 2.40
2051 2192 1.068333 ACATTGCACGCACCTTGAATC 60.068 47.619 0.00 0.00 0.00 2.52
2052 2193 0.961019 ACATTGCACGCACCTTGAAT 59.039 45.000 0.00 0.00 0.00 2.57
2053 2194 0.030504 CACATTGCACGCACCTTGAA 59.969 50.000 0.00 0.00 0.00 2.69
2054 2195 1.653667 CACATTGCACGCACCTTGA 59.346 52.632 0.00 0.00 0.00 3.02
2055 2196 1.372004 CCACATTGCACGCACCTTG 60.372 57.895 0.00 0.00 0.00 3.61
2056 2197 1.528076 TCCACATTGCACGCACCTT 60.528 52.632 0.00 0.00 0.00 3.50
2057 2198 2.112928 TCCACATTGCACGCACCT 59.887 55.556 0.00 0.00 0.00 4.00
2058 2199 1.795170 AAGTCCACATTGCACGCACC 61.795 55.000 0.00 0.00 0.00 5.01
2059 2200 0.030638 AAAGTCCACATTGCACGCAC 59.969 50.000 0.00 0.00 0.00 5.34
2060 2201 0.743688 AAAAGTCCACATTGCACGCA 59.256 45.000 0.00 0.00 0.00 5.24
2061 2202 1.268999 TGAAAAGTCCACATTGCACGC 60.269 47.619 0.00 0.00 0.00 5.34
2062 2203 2.772568 TGAAAAGTCCACATTGCACG 57.227 45.000 0.00 0.00 0.00 5.34
2063 2204 4.022935 TGAGATGAAAAGTCCACATTGCAC 60.023 41.667 0.00 0.00 0.00 4.57
2064 2205 4.143543 TGAGATGAAAAGTCCACATTGCA 58.856 39.130 0.00 0.00 0.00 4.08
2065 2206 4.771590 TGAGATGAAAAGTCCACATTGC 57.228 40.909 0.00 0.00 0.00 3.56
2066 2207 5.048224 AGCTTGAGATGAAAAGTCCACATTG 60.048 40.000 0.00 0.00 0.00 2.82
2067 2208 5.075493 AGCTTGAGATGAAAAGTCCACATT 58.925 37.500 0.00 0.00 0.00 2.71
2068 2209 4.660168 AGCTTGAGATGAAAAGTCCACAT 58.340 39.130 0.00 0.00 0.00 3.21
2069 2210 4.090761 AGCTTGAGATGAAAAGTCCACA 57.909 40.909 0.00 0.00 0.00 4.17
2070 2211 5.877012 TCATAGCTTGAGATGAAAAGTCCAC 59.123 40.000 0.00 0.00 0.00 4.02
2071 2212 6.053632 TCATAGCTTGAGATGAAAAGTCCA 57.946 37.500 0.00 0.00 0.00 4.02
2181 2322 7.749570 CAGCATCTCTTGAATCTTAAAACACTG 59.250 37.037 0.00 0.00 0.00 3.66
2653 2794 4.842531 TGAAAAGTGCCATCTAGATCCA 57.157 40.909 1.03 0.21 0.00 3.41
2725 2866 6.721318 AGGCAATAAACTCCACAAAGAGATA 58.279 36.000 0.00 0.00 37.33 1.98
2858 3002 0.526310 GCGCAAATCAAGGGCTAAGC 60.526 55.000 0.30 0.00 41.20 3.09
2978 3122 6.126409 AGTTATGACAGGACTAAGAGAGGAG 58.874 44.000 0.00 0.00 0.00 3.69
3032 3176 5.521544 GTCAACAGAGGTATATCCGAGTTC 58.478 45.833 0.00 0.00 41.99 3.01
3048 3192 4.124851 AGGTATAGGCTTTCGTCAACAG 57.875 45.455 0.00 0.00 0.00 3.16
3181 3325 3.181483 GGCCAGGCAAATGAGATTGTAAG 60.181 47.826 15.19 0.00 32.80 2.34
3182 3326 2.760092 GGCCAGGCAAATGAGATTGTAA 59.240 45.455 15.19 0.00 32.80 2.41
3183 3327 2.025037 AGGCCAGGCAAATGAGATTGTA 60.025 45.455 15.19 0.00 32.80 2.41
3212 3356 6.183361 ACCTGGCTAAATACGAGGATATGTTT 60.183 38.462 0.00 0.00 0.00 2.83
3233 3377 3.963665 TCAAAGCGATTTGAAACACCTG 58.036 40.909 25.27 0.00 37.93 4.00
3247 3391 9.469807 AACTATTCAAGATATCTACTCAAAGCG 57.530 33.333 5.46 0.00 0.00 4.68
3342 3486 3.808174 AGTTCAACCGCAGAGACTTAAAC 59.192 43.478 0.00 0.00 0.00 2.01
3485 3629 1.544724 TGCTCTGGTTGGGCAAATAC 58.455 50.000 0.00 0.00 32.79 1.89
3503 3647 5.247507 TCTTCCAGTGTGTTGTTCATTTG 57.752 39.130 0.00 0.00 0.00 2.32
3664 3808 3.995048 GAGGTCGTTCTACAAGGGAAAAG 59.005 47.826 0.00 0.00 0.00 2.27
3701 3845 8.996024 TCTTGTGTATTCGAATCTGATACAAA 57.004 30.769 15.25 5.33 30.69 2.83
3880 4024 1.532868 CGGGAGTTCAAGTCAGCTTTG 59.467 52.381 0.00 0.00 31.49 2.77
4002 4146 4.832266 AGATTGTGTTAATGCCTTCCAACA 59.168 37.500 0.00 0.00 0.00 3.33
4224 4368 3.266636 TCAAGTTTCAAGTTCGTGCTCA 58.733 40.909 0.00 0.00 0.00 4.26
4254 4398 8.454106 CAACAGGTGAAAACTTAGGATCTATTG 58.546 37.037 0.00 0.00 0.00 1.90
4264 4408 6.833041 TGTATCCTCAACAGGTGAAAACTTA 58.167 36.000 0.00 0.00 41.28 2.24
4297 4441 4.857509 AGAGTTCCGATCATTAGTAGGC 57.142 45.455 0.00 0.00 0.00 3.93
4350 4494 2.655090 TGAGATTGTGCCAACCTCAA 57.345 45.000 8.95 0.00 31.72 3.02
4367 4511 2.556189 CCATGTTGGTGGACGATTTTGA 59.444 45.455 0.00 0.00 42.02 2.69
4414 4558 9.783081 AAAGCAAAGGAAACATAAATGAATTCT 57.217 25.926 7.05 0.00 32.17 2.40
4567 4713 4.444720 CGAACTCTGACAACAAGTTACTCC 59.555 45.833 0.00 0.00 33.54 3.85
4569 4715 4.098960 TCCGAACTCTGACAACAAGTTACT 59.901 41.667 0.00 0.00 33.54 2.24
4570 4716 4.365723 TCCGAACTCTGACAACAAGTTAC 58.634 43.478 0.00 0.00 33.54 2.50
4571 4717 4.659111 TCCGAACTCTGACAACAAGTTA 57.341 40.909 0.00 0.00 33.54 2.24
4572 4718 3.536956 TCCGAACTCTGACAACAAGTT 57.463 42.857 0.00 0.00 36.00 2.66
4574 4720 3.458189 AGTTCCGAACTCTGACAACAAG 58.542 45.455 8.03 0.00 37.02 3.16
4576 4722 3.132289 AGAAGTTCCGAACTCTGACAACA 59.868 43.478 14.18 0.00 41.91 3.33
4577 4723 3.718815 AGAAGTTCCGAACTCTGACAAC 58.281 45.455 14.18 1.74 41.91 3.32
4582 4729 5.047847 TGTTGTTAGAAGTTCCGAACTCTG 58.952 41.667 14.18 0.00 41.91 3.35
4589 4739 6.236017 TGCTAATTGTTGTTAGAAGTTCCG 57.764 37.500 0.00 0.00 34.34 4.30
4616 4766 5.444218 GCTTTACTACGAAACCAGTCAATCG 60.444 44.000 0.00 0.00 40.90 3.34
4626 4776 8.290663 TCTGTTAAGAAGCTTTACTACGAAAC 57.709 34.615 0.00 0.00 0.00 2.78
4657 4807 6.388619 ACTTTATGGAGGGAGTATGTGTTT 57.611 37.500 0.00 0.00 0.00 2.83
4737 4888 4.215908 GTCATACATCAGTACTCCCTCCA 58.784 47.826 0.00 0.00 31.96 3.86
4759 4910 0.384725 CGGCAAGAACAAAGCACTCG 60.385 55.000 0.00 0.00 0.00 4.18
5092 5243 7.177216 TCAACAAAAGAGCATTACCTCATTGAT 59.823 33.333 11.86 1.89 35.88 2.57
5287 5442 3.884704 GACATGGCTGCCCAACCCA 62.885 63.158 17.53 0.00 46.14 4.51
5392 5554 5.675684 AACACAACTCATGTTTCCCTTTT 57.324 34.783 0.00 0.00 41.46 2.27
5393 5555 5.418676 CAAACACAACTCATGTTTCCCTTT 58.581 37.500 0.26 0.00 44.97 3.11
5395 5557 3.384467 CCAAACACAACTCATGTTTCCCT 59.616 43.478 0.26 0.00 44.97 4.20
5396 5558 3.492482 CCCAAACACAACTCATGTTTCCC 60.492 47.826 0.26 0.00 44.97 3.97
5397 5559 3.383185 TCCCAAACACAACTCATGTTTCC 59.617 43.478 0.26 0.00 44.97 3.13
5398 5560 4.338118 TCTCCCAAACACAACTCATGTTTC 59.662 41.667 0.26 0.00 44.97 2.78
5404 5566 3.278574 CAGTTCTCCCAAACACAACTCA 58.721 45.455 0.00 0.00 0.00 3.41
5470 5637 5.432645 TCAACACACCATAACAGAACAGAA 58.567 37.500 0.00 0.00 0.00 3.02
5763 5985 1.516423 GCTTAGGGAGGGACGTCAC 59.484 63.158 18.91 15.14 0.00 3.67
5778 6000 4.946478 AGCCAAATACTCTCTATCGCTT 57.054 40.909 0.00 0.00 0.00 4.68
5781 6003 5.773575 TGCTTAGCCAAATACTCTCTATCG 58.226 41.667 0.29 0.00 0.00 2.92
5793 6040 1.242989 TCGCACATTGCTTAGCCAAA 58.757 45.000 0.29 0.00 42.25 3.28
5799 6046 4.655762 ACTCTCTATCGCACATTGCTTA 57.344 40.909 0.00 0.00 42.25 3.09
5800 6047 3.533606 ACTCTCTATCGCACATTGCTT 57.466 42.857 0.00 0.00 42.25 3.91
5801 6048 3.634448 AGTACTCTCTATCGCACATTGCT 59.366 43.478 0.00 0.00 42.25 3.91
5802 6049 3.971150 AGTACTCTCTATCGCACATTGC 58.029 45.455 0.00 0.00 40.69 3.56
5803 6050 4.742167 CCAAGTACTCTCTATCGCACATTG 59.258 45.833 0.00 0.00 0.00 2.82
5804 6051 4.402793 ACCAAGTACTCTCTATCGCACATT 59.597 41.667 0.00 0.00 0.00 2.71
5805 6052 3.954904 ACCAAGTACTCTCTATCGCACAT 59.045 43.478 0.00 0.00 0.00 3.21
5806 6053 3.353557 ACCAAGTACTCTCTATCGCACA 58.646 45.455 0.00 0.00 0.00 4.57
5807 6054 4.373348 AACCAAGTACTCTCTATCGCAC 57.627 45.455 0.00 0.00 0.00 5.34
5808 6055 5.450137 GCTTAACCAAGTACTCTCTATCGCA 60.450 44.000 0.00 0.00 34.00 5.10
5809 6056 4.977347 GCTTAACCAAGTACTCTCTATCGC 59.023 45.833 0.00 0.00 34.00 4.58
5810 6057 6.380095 AGCTTAACCAAGTACTCTCTATCG 57.620 41.667 0.00 0.00 34.00 2.92
5811 6058 8.852135 ACATAGCTTAACCAAGTACTCTCTATC 58.148 37.037 0.00 0.00 34.00 2.08
5812 6059 8.634444 CACATAGCTTAACCAAGTACTCTCTAT 58.366 37.037 0.00 0.00 34.00 1.98
5813 6060 7.416438 GCACATAGCTTAACCAAGTACTCTCTA 60.416 40.741 0.00 0.00 41.15 2.43
5814 6061 6.628398 GCACATAGCTTAACCAAGTACTCTCT 60.628 42.308 0.00 0.00 41.15 3.10
5815 6062 5.520649 GCACATAGCTTAACCAAGTACTCTC 59.479 44.000 0.00 0.00 41.15 3.20
5816 6063 5.420409 GCACATAGCTTAACCAAGTACTCT 58.580 41.667 0.00 0.00 41.15 3.24
5817 6064 5.720261 GCACATAGCTTAACCAAGTACTC 57.280 43.478 0.00 0.00 41.15 2.59
5842 6089 4.580868 TGAAAGTCATGCGGTAAATACCA 58.419 39.130 10.10 0.00 46.80 3.25
5944 6198 3.066064 CGGATTCCAAACAACAGTGTCAA 59.934 43.478 3.09 0.00 36.80 3.18
5993 6249 4.508124 GCAGAGAGTCTCTTTCGACAAAAA 59.492 41.667 20.38 0.00 38.99 1.94
5994 6250 4.051922 GCAGAGAGTCTCTTTCGACAAAA 58.948 43.478 20.38 0.00 38.99 2.44
5995 6251 3.553096 GGCAGAGAGTCTCTTTCGACAAA 60.553 47.826 20.38 0.00 38.99 2.83
5996 6252 2.029828 GGCAGAGAGTCTCTTTCGACAA 60.030 50.000 20.38 0.00 38.99 3.18
5997 6253 1.542030 GGCAGAGAGTCTCTTTCGACA 59.458 52.381 20.38 0.00 38.99 4.35
5998 6254 1.135228 GGGCAGAGAGTCTCTTTCGAC 60.135 57.143 20.38 11.38 38.99 4.20
5999 6255 1.178276 GGGCAGAGAGTCTCTTTCGA 58.822 55.000 20.38 0.00 38.99 3.71
6000 6256 0.891373 TGGGCAGAGAGTCTCTTTCG 59.109 55.000 20.38 10.51 38.99 3.46
6001 6257 1.899142 ACTGGGCAGAGAGTCTCTTTC 59.101 52.381 20.38 14.15 38.99 2.62
6002 6258 1.622811 CACTGGGCAGAGAGTCTCTTT 59.377 52.381 20.38 0.00 38.99 2.52
6003 6259 1.265236 CACTGGGCAGAGAGTCTCTT 58.735 55.000 20.38 1.72 38.99 2.85
6004 6260 0.614415 CCACTGGGCAGAGAGTCTCT 60.614 60.000 17.30 17.30 42.11 3.10
6005 6261 0.613292 TCCACTGGGCAGAGAGTCTC 60.613 60.000 12.54 12.54 0.00 3.36
6006 6262 0.042431 ATCCACTGGGCAGAGAGTCT 59.958 55.000 0.00 0.00 0.00 3.24
6007 6263 0.908198 AATCCACTGGGCAGAGAGTC 59.092 55.000 0.00 0.00 0.00 3.36
6008 6264 1.004044 CAAATCCACTGGGCAGAGAGT 59.996 52.381 0.00 0.00 0.00 3.24
6009 6265 1.747709 CAAATCCACTGGGCAGAGAG 58.252 55.000 0.00 0.00 0.00 3.20
6010 6266 0.322816 GCAAATCCACTGGGCAGAGA 60.323 55.000 0.00 0.00 0.00 3.10
6011 6267 1.318158 GGCAAATCCACTGGGCAGAG 61.318 60.000 0.00 0.00 34.01 3.35
6012 6268 1.304381 GGCAAATCCACTGGGCAGA 60.304 57.895 0.00 0.00 34.01 4.26
6013 6269 1.601419 CTGGCAAATCCACTGGGCAG 61.601 60.000 0.00 0.00 45.47 4.85
6014 6270 1.607178 CTGGCAAATCCACTGGGCA 60.607 57.895 0.00 0.00 40.72 5.36
6015 6271 0.899717 TTCTGGCAAATCCACTGGGC 60.900 55.000 0.00 0.00 40.72 5.36
6016 6272 1.631405 TTTCTGGCAAATCCACTGGG 58.369 50.000 0.00 0.00 40.72 4.45
6017 6273 2.892852 TCTTTTCTGGCAAATCCACTGG 59.107 45.455 0.00 0.00 40.72 4.00
6018 6274 3.305608 GGTCTTTTCTGGCAAATCCACTG 60.306 47.826 0.00 0.00 40.72 3.66
6019 6275 2.893489 GGTCTTTTCTGGCAAATCCACT 59.107 45.455 0.00 0.00 40.72 4.00
6020 6276 2.029020 GGGTCTTTTCTGGCAAATCCAC 60.029 50.000 0.00 0.00 40.72 4.02
6021 6277 2.247358 GGGTCTTTTCTGGCAAATCCA 58.753 47.619 0.00 0.00 44.18 3.41
6022 6278 1.550524 GGGGTCTTTTCTGGCAAATCC 59.449 52.381 0.00 0.00 0.00 3.01
6023 6279 1.550524 GGGGGTCTTTTCTGGCAAATC 59.449 52.381 0.00 0.00 0.00 2.17
6024 6280 1.149923 AGGGGGTCTTTTCTGGCAAAT 59.850 47.619 0.00 0.00 0.00 2.32
6025 6281 0.560688 AGGGGGTCTTTTCTGGCAAA 59.439 50.000 0.00 0.00 0.00 3.68
6026 6282 0.560688 AAGGGGGTCTTTTCTGGCAA 59.439 50.000 0.00 0.00 29.99 4.52
6027 6283 0.112412 GAAGGGGGTCTTTTCTGGCA 59.888 55.000 0.00 0.00 35.50 4.92
6028 6284 0.960861 CGAAGGGGGTCTTTTCTGGC 60.961 60.000 0.00 0.00 35.50 4.85
6029 6285 3.249687 CGAAGGGGGTCTTTTCTGG 57.750 57.895 0.00 0.00 35.50 3.86
6043 6299 2.679355 TTTGTCAATTGCGTCCGAAG 57.321 45.000 0.00 0.00 0.00 3.79
6044 6300 3.367607 CTTTTTGTCAATTGCGTCCGAA 58.632 40.909 0.00 0.00 0.00 4.30
6045 6301 2.287308 CCTTTTTGTCAATTGCGTCCGA 60.287 45.455 0.00 0.00 0.00 4.55
6046 6302 2.050691 CCTTTTTGTCAATTGCGTCCG 58.949 47.619 0.00 0.00 0.00 4.79
6047 6303 3.049912 GTCCTTTTTGTCAATTGCGTCC 58.950 45.455 0.00 0.00 0.00 4.79
6048 6304 3.049912 GGTCCTTTTTGTCAATTGCGTC 58.950 45.455 0.00 0.00 0.00 5.19
6049 6305 2.223947 GGGTCCTTTTTGTCAATTGCGT 60.224 45.455 0.00 0.00 0.00 5.24
6050 6306 2.403259 GGGTCCTTTTTGTCAATTGCG 58.597 47.619 0.00 0.00 0.00 4.85
6051 6307 2.549992 GGGGGTCCTTTTTGTCAATTGC 60.550 50.000 0.00 0.00 0.00 3.56
6052 6308 2.972021 AGGGGGTCCTTTTTGTCAATTG 59.028 45.455 0.00 0.00 41.56 2.32
6053 6309 3.239449 GAGGGGGTCCTTTTTGTCAATT 58.761 45.455 0.00 0.00 45.05 2.32
6054 6310 2.178984 TGAGGGGGTCCTTTTTGTCAAT 59.821 45.455 0.00 0.00 45.05 2.57
6055 6311 1.571457 TGAGGGGGTCCTTTTTGTCAA 59.429 47.619 0.00 0.00 45.05 3.18
6056 6312 1.227249 TGAGGGGGTCCTTTTTGTCA 58.773 50.000 0.00 0.00 45.05 3.58
6057 6313 2.447443 GATGAGGGGGTCCTTTTTGTC 58.553 52.381 0.00 0.00 45.05 3.18
6058 6314 1.077169 GGATGAGGGGGTCCTTTTTGT 59.923 52.381 0.00 0.00 45.05 2.83
6059 6315 1.852633 GGATGAGGGGGTCCTTTTTG 58.147 55.000 0.00 0.00 45.05 2.44
6060 6316 0.331616 CGGATGAGGGGGTCCTTTTT 59.668 55.000 0.00 0.00 45.05 1.94
6061 6317 0.845102 ACGGATGAGGGGGTCCTTTT 60.845 55.000 0.00 0.00 45.05 2.27
6062 6318 1.229853 ACGGATGAGGGGGTCCTTT 60.230 57.895 0.00 0.00 45.05 3.11
6063 6319 1.995626 CACGGATGAGGGGGTCCTT 60.996 63.158 0.00 0.00 45.05 3.36
6065 6321 3.480133 CCACGGATGAGGGGGTCC 61.480 72.222 0.00 0.00 0.00 4.46
6066 6322 4.176752 GCCACGGATGAGGGGGTC 62.177 72.222 0.00 0.00 0.00 4.46
6138 6394 3.263503 GAAAACCGTTCTGCCCCGC 62.264 63.158 0.00 0.00 0.00 6.13
6139 6395 2.622962 GGAAAACCGTTCTGCCCCG 61.623 63.158 0.00 0.00 0.00 5.73
6140 6396 2.622962 CGGAAAACCGTTCTGCCCC 61.623 63.158 0.00 0.00 0.00 5.80
6141 6397 2.951458 CGGAAAACCGTTCTGCCC 59.049 61.111 0.00 0.00 0.00 5.36
6142 6398 2.254350 GCGGAAAACCGTTCTGCC 59.746 61.111 8.41 0.00 43.19 4.85
6144 6400 0.041312 CTGTGCGGAAAACCGTTCTG 60.041 55.000 10.25 4.71 35.43 3.02
6145 6401 0.463116 ACTGTGCGGAAAACCGTTCT 60.463 50.000 10.25 0.00 35.43 3.01
6146 6402 0.316689 CACTGTGCGGAAAACCGTTC 60.317 55.000 10.25 4.81 35.43 3.95
6147 6403 1.720694 CCACTGTGCGGAAAACCGTT 61.721 55.000 10.25 0.00 35.43 4.44
6148 6404 2.184167 CCACTGTGCGGAAAACCGT 61.184 57.895 10.25 0.00 35.43 4.83
6149 6405 2.637025 CCACTGTGCGGAAAACCG 59.363 61.111 1.29 4.21 0.00 4.44
6150 6406 2.335011 GCCACTGTGCGGAAAACC 59.665 61.111 1.29 0.00 0.00 3.27
6158 6414 2.742372 CCAGGTACGCCACTGTGC 60.742 66.667 1.29 0.00 37.19 4.57
6159 6415 2.047274 CCCAGGTACGCCACTGTG 60.047 66.667 0.00 0.00 37.19 3.66
6160 6416 2.203728 TCCCAGGTACGCCACTGT 60.204 61.111 0.00 0.00 37.19 3.55
6161 6417 2.264794 GTCCCAGGTACGCCACTG 59.735 66.667 0.00 0.00 37.19 3.66
6162 6418 3.379445 CGTCCCAGGTACGCCACT 61.379 66.667 0.00 0.00 37.19 4.00
6163 6419 4.446413 CCGTCCCAGGTACGCCAC 62.446 72.222 0.00 0.00 39.00 5.01
6164 6420 4.682334 TCCGTCCCAGGTACGCCA 62.682 66.667 0.00 0.00 39.00 5.69
6165 6421 3.384532 TTCCGTCCCAGGTACGCC 61.385 66.667 0.00 0.00 39.00 5.68
6166 6422 2.125793 GTTCCGTCCCAGGTACGC 60.126 66.667 0.00 0.00 39.00 4.42
6167 6423 2.180017 CGTTCCGTCCCAGGTACG 59.820 66.667 0.00 0.00 45.65 3.67
6168 6424 2.575461 CCGTTCCGTCCCAGGTAC 59.425 66.667 0.00 0.00 0.00 3.34
6169 6425 2.681064 CCCGTTCCGTCCCAGGTA 60.681 66.667 0.00 0.00 0.00 3.08
6179 6435 4.506255 CATCCCCTGGCCCGTTCC 62.506 72.222 0.00 0.00 0.00 3.62
6180 6436 3.728373 ACATCCCCTGGCCCGTTC 61.728 66.667 0.00 0.00 0.00 3.95
6181 6437 4.047125 CACATCCCCTGGCCCGTT 62.047 66.667 0.00 0.00 0.00 4.44
6187 6443 3.432335 ATGGCCCACATCCCCTGG 61.432 66.667 0.00 0.00 33.53 4.45
6188 6444 2.123597 CATGGCCCACATCCCCTG 60.124 66.667 0.00 0.00 37.84 4.45
6189 6445 4.147587 GCATGGCCCACATCCCCT 62.148 66.667 0.00 0.00 37.84 4.79
6243 6499 4.410400 GGGTTGTCGGCCAGGGAG 62.410 72.222 2.24 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.