Multiple sequence alignment - TraesCS3D01G216700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G216700 | chr3D | 100.000 | 3470 | 0 | 0 | 1 | 3470 | 294047395 | 294050864 | 0.000000e+00 | 6408 |
1 | TraesCS3D01G216700 | chr3D | 92.364 | 275 | 20 | 1 | 1261 | 1535 | 31092519 | 31092792 | 1.170000e-104 | 390 |
2 | TraesCS3D01G216700 | chr3D | 93.103 | 87 | 5 | 1 | 697 | 782 | 294041630 | 294041716 | 3.640000e-25 | 126 |
3 | TraesCS3D01G216700 | chr3A | 92.188 | 2829 | 78 | 51 | 719 | 3470 | 388801760 | 388804522 | 0.000000e+00 | 3868 |
4 | TraesCS3D01G216700 | chr3A | 74.419 | 473 | 98 | 19 | 1369 | 1830 | 30544407 | 30544867 | 7.650000e-42 | 182 |
5 | TraesCS3D01G216700 | chr3A | 92.727 | 110 | 5 | 1 | 4 | 113 | 388801545 | 388801651 | 4.640000e-34 | 156 |
6 | TraesCS3D01G216700 | chr3A | 88.889 | 108 | 11 | 1 | 582 | 689 | 733486463 | 733486569 | 7.810000e-27 | 132 |
7 | TraesCS3D01G216700 | chr3B | 94.299 | 1947 | 69 | 22 | 707 | 2633 | 387886588 | 387888512 | 0.000000e+00 | 2942 |
8 | TraesCS3D01G216700 | chr3B | 92.188 | 512 | 16 | 10 | 2973 | 3469 | 387889518 | 387890020 | 0.000000e+00 | 702 |
9 | TraesCS3D01G216700 | chr3B | 86.376 | 367 | 16 | 12 | 2630 | 2971 | 387888883 | 387889240 | 1.520000e-98 | 370 |
10 | TraesCS3D01G216700 | chr3B | 83.108 | 296 | 46 | 2 | 292 | 583 | 703118409 | 703118704 | 2.050000e-67 | 267 |
11 | TraesCS3D01G216700 | chr3B | 79.208 | 404 | 67 | 10 | 292 | 684 | 827401561 | 827401164 | 7.380000e-67 | 265 |
12 | TraesCS3D01G216700 | chr3B | 79.208 | 404 | 67 | 10 | 292 | 684 | 830789240 | 830789637 | 7.380000e-67 | 265 |
13 | TraesCS3D01G216700 | chr3B | 73.895 | 475 | 106 | 18 | 1369 | 1835 | 36543826 | 36543362 | 1.280000e-39 | 174 |
14 | TraesCS3D01G216700 | chr3B | 83.206 | 131 | 17 | 3 | 141 | 268 | 387838826 | 387838954 | 7.870000e-22 | 115 |
15 | TraesCS3D01G216700 | chr1D | 85.856 | 403 | 45 | 7 | 292 | 684 | 6522782 | 6522382 | 5.360000e-113 | 418 |
16 | TraesCS3D01G216700 | chr5D | 84.804 | 408 | 49 | 8 | 292 | 689 | 13784198 | 13784602 | 6.980000e-107 | 398 |
17 | TraesCS3D01G216700 | chr5D | 90.173 | 173 | 11 | 3 | 424 | 590 | 445106488 | 445106660 | 1.620000e-53 | 220 |
18 | TraesCS3D01G216700 | chr7B | 84.553 | 369 | 46 | 7 | 294 | 653 | 467988942 | 467989308 | 4.260000e-94 | 355 |
19 | TraesCS3D01G216700 | chr7B | 87.850 | 107 | 10 | 2 | 580 | 684 | 679501170 | 679501065 | 4.700000e-24 | 122 |
20 | TraesCS3D01G216700 | chr6D | 86.207 | 319 | 40 | 3 | 292 | 606 | 448381410 | 448381728 | 3.320000e-90 | 342 |
21 | TraesCS3D01G216700 | chr4A | 85.809 | 303 | 32 | 4 | 292 | 583 | 274744758 | 274745060 | 9.350000e-81 | 311 |
22 | TraesCS3D01G216700 | chr4A | 90.909 | 88 | 8 | 0 | 1244 | 1331 | 541017812 | 541017899 | 6.080000e-23 | 119 |
23 | TraesCS3D01G216700 | chr2D | 79.419 | 413 | 62 | 15 | 292 | 689 | 621264280 | 621263876 | 1.590000e-68 | 270 |
24 | TraesCS3D01G216700 | chr2D | 91.667 | 168 | 9 | 2 | 424 | 586 | 420278321 | 420278154 | 9.690000e-56 | 228 |
25 | TraesCS3D01G216700 | chr2A | 92.265 | 181 | 14 | 0 | 1243 | 1423 | 211481983 | 211481803 | 1.240000e-64 | 257 |
26 | TraesCS3D01G216700 | chr1B | 91.765 | 170 | 9 | 2 | 423 | 587 | 65568945 | 65568776 | 7.490000e-57 | 231 |
27 | TraesCS3D01G216700 | chr1B | 83.761 | 117 | 15 | 4 | 570 | 684 | 647833494 | 647833608 | 1.320000e-19 | 108 |
28 | TraesCS3D01G216700 | chr4B | 92.715 | 151 | 11 | 0 | 288 | 438 | 611495452 | 611495602 | 5.830000e-53 | 219 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G216700 | chr3D | 294047395 | 294050864 | 3469 | False | 6408 | 6408 | 100.000000 | 1 | 3470 | 1 | chr3D.!!$F3 | 3469 |
1 | TraesCS3D01G216700 | chr3A | 388801545 | 388804522 | 2977 | False | 2012 | 3868 | 92.457500 | 4 | 3470 | 2 | chr3A.!!$F3 | 3466 |
2 | TraesCS3D01G216700 | chr3B | 387886588 | 387890020 | 3432 | False | 1338 | 2942 | 90.954333 | 707 | 3469 | 3 | chr3B.!!$F4 | 2762 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
277 | 278 | 0.035458 | CCACAGTCAGGTCTTCCCAC | 59.965 | 60.0 | 0.0 | 0.0 | 34.66 | 4.61 | F |
966 | 999 | 0.036952 | CCACTCCAGTACAGCACCAG | 60.037 | 60.0 | 0.0 | 0.0 | 0.00 | 4.00 | F |
967 | 1000 | 0.671781 | CACTCCAGTACAGCACCAGC | 60.672 | 60.0 | 0.0 | 0.0 | 42.56 | 4.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1395 | 1440 | 0.331954 | TGAAGTACTCTCCGCTCCCT | 59.668 | 55.000 | 0.00 | 0.0 | 0.00 | 4.20 | R |
2409 | 2454 | 1.666872 | GTCGAACACCACCCGGAAG | 60.667 | 63.158 | 0.73 | 0.0 | 35.59 | 3.46 | R |
2623 | 2680 | 1.734163 | AACAAACCGCCTTATCCTCG | 58.266 | 50.000 | 0.00 | 0.0 | 0.00 | 4.63 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
35 | 36 | 3.753272 | ACACGCAGTAGCAAGAAAATGAT | 59.247 | 39.130 | 0.00 | 0.00 | 41.61 | 2.45 |
36 | 37 | 4.935205 | ACACGCAGTAGCAAGAAAATGATA | 59.065 | 37.500 | 0.00 | 0.00 | 41.61 | 2.15 |
37 | 38 | 5.163854 | ACACGCAGTAGCAAGAAAATGATAC | 60.164 | 40.000 | 0.00 | 0.00 | 41.61 | 2.24 |
78 | 79 | 3.443925 | GGCAGGGGAAAAGCTCGC | 61.444 | 66.667 | 0.00 | 0.00 | 36.26 | 5.03 |
113 | 114 | 1.080569 | CAACAATGGCTGGTTCCGC | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
120 | 121 | 3.741476 | GCTGGTTCCGCCTTGCTG | 61.741 | 66.667 | 0.00 | 0.00 | 38.35 | 4.41 |
121 | 122 | 2.032528 | CTGGTTCCGCCTTGCTGA | 59.967 | 61.111 | 0.00 | 0.00 | 38.35 | 4.26 |
122 | 123 | 1.377725 | CTGGTTCCGCCTTGCTGAT | 60.378 | 57.895 | 0.00 | 0.00 | 38.35 | 2.90 |
123 | 124 | 1.651240 | CTGGTTCCGCCTTGCTGATG | 61.651 | 60.000 | 0.00 | 0.00 | 38.35 | 3.07 |
124 | 125 | 2.409870 | GGTTCCGCCTTGCTGATGG | 61.410 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
125 | 126 | 1.675641 | GTTCCGCCTTGCTGATGGT | 60.676 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
126 | 127 | 1.675310 | TTCCGCCTTGCTGATGGTG | 60.675 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
127 | 128 | 2.360350 | CCGCCTTGCTGATGGTGT | 60.360 | 61.111 | 0.00 | 0.00 | 32.37 | 4.16 |
128 | 129 | 2.693762 | CCGCCTTGCTGATGGTGTG | 61.694 | 63.158 | 0.00 | 0.00 | 32.37 | 3.82 |
129 | 130 | 2.570181 | GCCTTGCTGATGGTGTGC | 59.430 | 61.111 | 0.00 | 0.00 | 0.00 | 4.57 |
130 | 131 | 2.998279 | GCCTTGCTGATGGTGTGCC | 61.998 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
131 | 132 | 2.345760 | CCTTGCTGATGGTGTGCCC | 61.346 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
149 | 150 | 3.525268 | CCCAATACAGGCACAAAATCC | 57.475 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
150 | 151 | 2.159254 | CCCAATACAGGCACAAAATCCG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
151 | 152 | 2.529151 | CAATACAGGCACAAAATCCGC | 58.471 | 47.619 | 0.00 | 0.00 | 0.00 | 5.54 |
152 | 153 | 0.732571 | ATACAGGCACAAAATCCGCG | 59.267 | 50.000 | 0.00 | 0.00 | 0.00 | 6.46 |
153 | 154 | 0.604243 | TACAGGCACAAAATCCGCGT | 60.604 | 50.000 | 4.92 | 0.00 | 0.00 | 6.01 |
154 | 155 | 1.154225 | CAGGCACAAAATCCGCGTC | 60.154 | 57.895 | 4.92 | 0.00 | 0.00 | 5.19 |
155 | 156 | 1.599518 | AGGCACAAAATCCGCGTCA | 60.600 | 52.632 | 4.92 | 0.00 | 0.00 | 4.35 |
156 | 157 | 1.154225 | GGCACAAAATCCGCGTCAG | 60.154 | 57.895 | 4.92 | 0.00 | 0.00 | 3.51 |
177 | 178 | 0.387622 | TTGCGCATTTGCTCTTGCTC | 60.388 | 50.000 | 12.75 | 0.00 | 40.48 | 4.26 |
199 | 200 | 3.869272 | CTGCAAGCCGGATCACGC | 61.869 | 66.667 | 5.05 | 3.16 | 42.52 | 5.34 |
200 | 201 | 4.393155 | TGCAAGCCGGATCACGCT | 62.393 | 61.111 | 5.05 | 0.12 | 42.52 | 5.07 |
201 | 202 | 3.567797 | GCAAGCCGGATCACGCTC | 61.568 | 66.667 | 5.05 | 0.00 | 42.52 | 5.03 |
202 | 203 | 2.892425 | CAAGCCGGATCACGCTCC | 60.892 | 66.667 | 5.05 | 0.00 | 42.52 | 4.70 |
203 | 204 | 3.390521 | AAGCCGGATCACGCTCCA | 61.391 | 61.111 | 5.05 | 0.00 | 42.52 | 3.86 |
204 | 205 | 3.665675 | AAGCCGGATCACGCTCCAC | 62.666 | 63.158 | 5.05 | 0.00 | 42.52 | 4.02 |
206 | 207 | 4.873129 | CCGGATCACGCTCCACCG | 62.873 | 72.222 | 0.00 | 0.00 | 42.52 | 4.94 |
230 | 231 | 2.957484 | TACGCCGACACCACACACAC | 62.957 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
231 | 232 | 2.512745 | GCCGACACCACACACACA | 60.513 | 61.111 | 0.00 | 0.00 | 0.00 | 3.72 |
247 | 248 | 0.179084 | CACAAGACGTGTCCACACCT | 60.179 | 55.000 | 0.00 | 0.00 | 43.66 | 4.00 |
267 | 268 | 0.322975 | CCAGGTCTTCCCACAGTCAG | 59.677 | 60.000 | 0.00 | 0.00 | 34.66 | 3.51 |
268 | 269 | 0.322975 | CAGGTCTTCCCACAGTCAGG | 59.677 | 60.000 | 0.00 | 0.00 | 34.66 | 3.86 |
270 | 271 | 0.321996 | GGTCTTCCCACAGTCAGGTC | 59.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
272 | 273 | 1.694696 | GTCTTCCCACAGTCAGGTCTT | 59.305 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
273 | 274 | 1.971357 | TCTTCCCACAGTCAGGTCTTC | 59.029 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
275 | 276 | 0.836400 | TCCCACAGTCAGGTCTTCCC | 60.836 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
276 | 277 | 1.127567 | CCCACAGTCAGGTCTTCCCA | 61.128 | 60.000 | 0.00 | 0.00 | 34.66 | 4.37 |
277 | 278 | 0.035458 | CCACAGTCAGGTCTTCCCAC | 59.965 | 60.000 | 0.00 | 0.00 | 34.66 | 4.61 |
278 | 279 | 0.758734 | CACAGTCAGGTCTTCCCACA | 59.241 | 55.000 | 0.00 | 0.00 | 34.66 | 4.17 |
279 | 280 | 1.051812 | ACAGTCAGGTCTTCCCACAG | 58.948 | 55.000 | 0.00 | 0.00 | 34.66 | 3.66 |
280 | 281 | 1.051812 | CAGTCAGGTCTTCCCACAGT | 58.948 | 55.000 | 0.00 | 0.00 | 34.66 | 3.55 |
281 | 282 | 1.001406 | CAGTCAGGTCTTCCCACAGTC | 59.999 | 57.143 | 0.00 | 0.00 | 34.66 | 3.51 |
282 | 283 | 1.048601 | GTCAGGTCTTCCCACAGTCA | 58.951 | 55.000 | 0.00 | 0.00 | 34.66 | 3.41 |
283 | 284 | 1.416401 | GTCAGGTCTTCCCACAGTCAA | 59.584 | 52.381 | 0.00 | 0.00 | 34.66 | 3.18 |
284 | 285 | 2.123589 | TCAGGTCTTCCCACAGTCAAA | 58.876 | 47.619 | 0.00 | 0.00 | 34.66 | 2.69 |
285 | 286 | 2.711009 | TCAGGTCTTCCCACAGTCAAAT | 59.289 | 45.455 | 0.00 | 0.00 | 34.66 | 2.32 |
286 | 287 | 3.077359 | CAGGTCTTCCCACAGTCAAATC | 58.923 | 50.000 | 0.00 | 0.00 | 34.66 | 2.17 |
287 | 288 | 2.982488 | AGGTCTTCCCACAGTCAAATCT | 59.018 | 45.455 | 0.00 | 0.00 | 34.66 | 2.40 |
288 | 289 | 3.077359 | GGTCTTCCCACAGTCAAATCTG | 58.923 | 50.000 | 0.00 | 0.00 | 40.80 | 2.90 |
290 | 291 | 3.748568 | GTCTTCCCACAGTCAAATCTGTC | 59.251 | 47.826 | 0.00 | 0.00 | 45.37 | 3.51 |
291 | 292 | 3.390967 | TCTTCCCACAGTCAAATCTGTCA | 59.609 | 43.478 | 0.00 | 0.00 | 45.37 | 3.58 |
292 | 293 | 3.407424 | TCCCACAGTCAAATCTGTCAG | 57.593 | 47.619 | 0.00 | 0.00 | 45.37 | 3.51 |
293 | 294 | 2.038952 | TCCCACAGTCAAATCTGTCAGG | 59.961 | 50.000 | 0.00 | 0.00 | 45.37 | 3.86 |
294 | 295 | 1.808945 | CCACAGTCAAATCTGTCAGGC | 59.191 | 52.381 | 0.00 | 0.00 | 45.37 | 4.85 |
295 | 296 | 2.551721 | CCACAGTCAAATCTGTCAGGCT | 60.552 | 50.000 | 0.00 | 0.00 | 45.37 | 4.58 |
296 | 297 | 2.483106 | CACAGTCAAATCTGTCAGGCTG | 59.517 | 50.000 | 8.58 | 8.58 | 45.37 | 4.85 |
297 | 298 | 2.082231 | CAGTCAAATCTGTCAGGCTGG | 58.918 | 52.381 | 15.73 | 0.00 | 0.00 | 4.85 |
298 | 299 | 1.701847 | AGTCAAATCTGTCAGGCTGGT | 59.298 | 47.619 | 15.73 | 0.00 | 0.00 | 4.00 |
299 | 300 | 2.079925 | GTCAAATCTGTCAGGCTGGTC | 58.920 | 52.381 | 15.73 | 9.03 | 0.00 | 4.02 |
300 | 301 | 1.699083 | TCAAATCTGTCAGGCTGGTCA | 59.301 | 47.619 | 15.73 | 13.10 | 0.00 | 4.02 |
301 | 302 | 2.306805 | TCAAATCTGTCAGGCTGGTCAT | 59.693 | 45.455 | 15.73 | 0.00 | 0.00 | 3.06 |
302 | 303 | 3.519107 | TCAAATCTGTCAGGCTGGTCATA | 59.481 | 43.478 | 15.73 | 7.76 | 0.00 | 2.15 |
303 | 304 | 3.834489 | AATCTGTCAGGCTGGTCATAG | 57.166 | 47.619 | 15.73 | 3.34 | 0.00 | 2.23 |
304 | 305 | 2.238084 | TCTGTCAGGCTGGTCATAGT | 57.762 | 50.000 | 15.73 | 0.00 | 0.00 | 2.12 |
305 | 306 | 1.827344 | TCTGTCAGGCTGGTCATAGTG | 59.173 | 52.381 | 15.73 | 3.46 | 0.00 | 2.74 |
306 | 307 | 0.904649 | TGTCAGGCTGGTCATAGTGG | 59.095 | 55.000 | 15.73 | 0.00 | 0.00 | 4.00 |
307 | 308 | 1.195115 | GTCAGGCTGGTCATAGTGGA | 58.805 | 55.000 | 15.73 | 0.00 | 0.00 | 4.02 |
308 | 309 | 1.555075 | GTCAGGCTGGTCATAGTGGAA | 59.445 | 52.381 | 15.73 | 0.00 | 0.00 | 3.53 |
309 | 310 | 2.027192 | GTCAGGCTGGTCATAGTGGAAA | 60.027 | 50.000 | 15.73 | 0.00 | 0.00 | 3.13 |
310 | 311 | 2.237143 | TCAGGCTGGTCATAGTGGAAAG | 59.763 | 50.000 | 15.73 | 0.00 | 0.00 | 2.62 |
311 | 312 | 2.026822 | CAGGCTGGTCATAGTGGAAAGT | 60.027 | 50.000 | 6.61 | 0.00 | 0.00 | 2.66 |
312 | 313 | 3.197766 | CAGGCTGGTCATAGTGGAAAGTA | 59.802 | 47.826 | 6.61 | 0.00 | 0.00 | 2.24 |
313 | 314 | 3.844211 | AGGCTGGTCATAGTGGAAAGTAA | 59.156 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
314 | 315 | 3.939592 | GGCTGGTCATAGTGGAAAGTAAC | 59.060 | 47.826 | 0.00 | 0.00 | 0.00 | 2.50 |
315 | 316 | 4.564821 | GGCTGGTCATAGTGGAAAGTAACA | 60.565 | 45.833 | 0.00 | 0.00 | 0.00 | 2.41 |
316 | 317 | 5.186198 | GCTGGTCATAGTGGAAAGTAACAT | 58.814 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
317 | 318 | 6.346096 | GCTGGTCATAGTGGAAAGTAACATA | 58.654 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
318 | 319 | 6.992715 | GCTGGTCATAGTGGAAAGTAACATAT | 59.007 | 38.462 | 0.00 | 0.00 | 0.00 | 1.78 |
319 | 320 | 8.148351 | GCTGGTCATAGTGGAAAGTAACATATA | 58.852 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
320 | 321 | 9.477484 | CTGGTCATAGTGGAAAGTAACATATAC | 57.523 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
321 | 322 | 9.209048 | TGGTCATAGTGGAAAGTAACATATACT | 57.791 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
361 | 362 | 9.170584 | CGATGCTAGTGTATAATATTACATCCG | 57.829 | 37.037 | 0.00 | 0.00 | 34.76 | 4.18 |
368 | 369 | 8.799367 | AGTGTATAATATTACATCCGTAGTGCA | 58.201 | 33.333 | 0.00 | 0.00 | 34.76 | 4.57 |
369 | 370 | 9.582431 | GTGTATAATATTACATCCGTAGTGCAT | 57.418 | 33.333 | 0.00 | 0.00 | 34.76 | 3.96 |
376 | 377 | 6.887626 | TTACATCCGTAGTGCATAGTATCA | 57.112 | 37.500 | 0.00 | 0.00 | 0.00 | 2.15 |
377 | 378 | 5.984695 | ACATCCGTAGTGCATAGTATCAT | 57.015 | 39.130 | 0.00 | 0.00 | 0.00 | 2.45 |
378 | 379 | 8.570068 | TTACATCCGTAGTGCATAGTATCATA | 57.430 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
379 | 380 | 7.462571 | ACATCCGTAGTGCATAGTATCATAA | 57.537 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
380 | 381 | 7.892609 | ACATCCGTAGTGCATAGTATCATAAA | 58.107 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
381 | 382 | 8.364894 | ACATCCGTAGTGCATAGTATCATAAAA | 58.635 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
382 | 383 | 9.371136 | CATCCGTAGTGCATAGTATCATAAAAT | 57.629 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
385 | 386 | 9.856488 | CCGTAGTGCATAGTATCATAAAATAGT | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
409 | 410 | 9.664332 | AGTATCATAGATGGTCTCATTTATTGC | 57.336 | 33.333 | 0.00 | 0.00 | 30.94 | 3.56 |
410 | 411 | 9.664332 | GTATCATAGATGGTCTCATTTATTGCT | 57.336 | 33.333 | 0.00 | 0.00 | 30.94 | 3.91 |
413 | 414 | 9.662947 | TCATAGATGGTCTCATTTATTGCTATG | 57.337 | 33.333 | 0.00 | 0.00 | 34.93 | 2.23 |
414 | 415 | 6.814506 | AGATGGTCTCATTTATTGCTATGC | 57.185 | 37.500 | 0.00 | 0.00 | 32.98 | 3.14 |
415 | 416 | 6.301486 | AGATGGTCTCATTTATTGCTATGCA | 58.699 | 36.000 | 0.00 | 0.00 | 32.81 | 3.96 |
416 | 417 | 6.946583 | AGATGGTCTCATTTATTGCTATGCAT | 59.053 | 34.615 | 3.79 | 3.79 | 34.08 | 3.96 |
417 | 418 | 6.321848 | TGGTCTCATTTATTGCTATGCATG | 57.678 | 37.500 | 10.16 | 0.26 | 38.76 | 4.06 |
418 | 419 | 6.063404 | TGGTCTCATTTATTGCTATGCATGA | 58.937 | 36.000 | 10.16 | 0.00 | 38.76 | 3.07 |
419 | 420 | 6.016860 | TGGTCTCATTTATTGCTATGCATGAC | 60.017 | 38.462 | 10.16 | 2.96 | 38.76 | 3.06 |
420 | 421 | 6.016860 | GGTCTCATTTATTGCTATGCATGACA | 60.017 | 38.462 | 10.16 | 4.24 | 38.76 | 3.58 |
421 | 422 | 6.854892 | GTCTCATTTATTGCTATGCATGACAC | 59.145 | 38.462 | 10.16 | 0.00 | 38.76 | 3.67 |
422 | 423 | 6.543100 | TCTCATTTATTGCTATGCATGACACA | 59.457 | 34.615 | 10.16 | 0.00 | 38.76 | 3.72 |
423 | 424 | 7.229907 | TCTCATTTATTGCTATGCATGACACAT | 59.770 | 33.333 | 10.16 | 6.58 | 38.76 | 3.21 |
424 | 425 | 8.393671 | TCATTTATTGCTATGCATGACACATA | 57.606 | 30.769 | 10.16 | 5.74 | 38.76 | 2.29 |
425 | 426 | 8.291740 | TCATTTATTGCTATGCATGACACATAC | 58.708 | 33.333 | 10.16 | 0.00 | 38.76 | 2.39 |
426 | 427 | 7.806409 | TTTATTGCTATGCATGACACATACT | 57.194 | 32.000 | 10.16 | 0.00 | 38.76 | 2.12 |
427 | 428 | 5.936686 | ATTGCTATGCATGACACATACTC | 57.063 | 39.130 | 10.16 | 0.00 | 38.76 | 2.59 |
428 | 429 | 3.732212 | TGCTATGCATGACACATACTCC | 58.268 | 45.455 | 10.16 | 0.00 | 31.71 | 3.85 |
429 | 430 | 3.070018 | GCTATGCATGACACATACTCCC | 58.930 | 50.000 | 10.16 | 0.00 | 0.00 | 4.30 |
430 | 431 | 3.244353 | GCTATGCATGACACATACTCCCT | 60.244 | 47.826 | 10.16 | 0.00 | 0.00 | 4.20 |
431 | 432 | 2.988010 | TGCATGACACATACTCCCTC | 57.012 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
432 | 433 | 1.486310 | TGCATGACACATACTCCCTCC | 59.514 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
433 | 434 | 1.539065 | GCATGACACATACTCCCTCCG | 60.539 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
434 | 435 | 1.757118 | CATGACACATACTCCCTCCGT | 59.243 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
435 | 436 | 1.933021 | TGACACATACTCCCTCCGTT | 58.067 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
436 | 437 | 1.822990 | TGACACATACTCCCTCCGTTC | 59.177 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
437 | 438 | 1.136500 | GACACATACTCCCTCCGTTCC | 59.864 | 57.143 | 0.00 | 0.00 | 0.00 | 3.62 |
438 | 439 | 1.191535 | CACATACTCCCTCCGTTCCA | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
439 | 440 | 1.553248 | CACATACTCCCTCCGTTCCAA | 59.447 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
440 | 441 | 2.027561 | CACATACTCCCTCCGTTCCAAA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
441 | 442 | 2.640826 | ACATACTCCCTCCGTTCCAAAA | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
442 | 443 | 3.265995 | ACATACTCCCTCCGTTCCAAAAT | 59.734 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
443 | 444 | 4.472108 | ACATACTCCCTCCGTTCCAAAATA | 59.528 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
444 | 445 | 5.132144 | ACATACTCCCTCCGTTCCAAAATAT | 59.868 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
445 | 446 | 6.328148 | ACATACTCCCTCCGTTCCAAAATATA | 59.672 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
446 | 447 | 5.703730 | ACTCCCTCCGTTCCAAAATATAA | 57.296 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
447 | 448 | 5.681639 | ACTCCCTCCGTTCCAAAATATAAG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
448 | 449 | 5.191124 | ACTCCCTCCGTTCCAAAATATAAGT | 59.809 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
449 | 450 | 5.677567 | TCCCTCCGTTCCAAAATATAAGTC | 58.322 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
450 | 451 | 5.427481 | TCCCTCCGTTCCAAAATATAAGTCT | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
451 | 452 | 6.069847 | TCCCTCCGTTCCAAAATATAAGTCTT | 60.070 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
452 | 453 | 6.602009 | CCCTCCGTTCCAAAATATAAGTCTTT | 59.398 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
453 | 454 | 7.201705 | CCCTCCGTTCCAAAATATAAGTCTTTC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 2.62 |
454 | 455 | 7.553044 | CCTCCGTTCCAAAATATAAGTCTTTCT | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
455 | 456 | 9.595823 | CTCCGTTCCAAAATATAAGTCTTTCTA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
456 | 457 | 9.595823 | TCCGTTCCAAAATATAAGTCTTTCTAG | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
457 | 458 | 9.595823 | CCGTTCCAAAATATAAGTCTTTCTAGA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
467 | 468 | 7.979786 | ATAAGTCTTTCTAGAGATTCCACCA | 57.020 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
468 | 469 | 6.688073 | AAGTCTTTCTAGAGATTCCACCAA | 57.312 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
469 | 470 | 6.293004 | AGTCTTTCTAGAGATTCCACCAAG | 57.707 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
470 | 471 | 5.782845 | AGTCTTTCTAGAGATTCCACCAAGT | 59.217 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
471 | 472 | 5.872070 | GTCTTTCTAGAGATTCCACCAAGTG | 59.128 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
472 | 473 | 5.780282 | TCTTTCTAGAGATTCCACCAAGTGA | 59.220 | 40.000 | 0.00 | 0.00 | 35.23 | 3.41 |
473 | 474 | 5.407407 | TTCTAGAGATTCCACCAAGTGAC | 57.593 | 43.478 | 0.00 | 0.00 | 35.23 | 3.67 |
474 | 475 | 4.678256 | TCTAGAGATTCCACCAAGTGACT | 58.322 | 43.478 | 0.00 | 0.00 | 35.23 | 3.41 |
475 | 476 | 5.827756 | TCTAGAGATTCCACCAAGTGACTA | 58.172 | 41.667 | 0.00 | 0.00 | 35.23 | 2.59 |
476 | 477 | 4.810191 | AGAGATTCCACCAAGTGACTAC | 57.190 | 45.455 | 0.00 | 0.00 | 35.23 | 2.73 |
477 | 478 | 4.160329 | AGAGATTCCACCAAGTGACTACA | 58.840 | 43.478 | 0.00 | 0.00 | 35.23 | 2.74 |
478 | 479 | 4.780021 | AGAGATTCCACCAAGTGACTACAT | 59.220 | 41.667 | 0.00 | 0.00 | 35.23 | 2.29 |
479 | 480 | 5.958380 | AGAGATTCCACCAAGTGACTACATA | 59.042 | 40.000 | 0.00 | 0.00 | 35.23 | 2.29 |
480 | 481 | 5.978814 | AGATTCCACCAAGTGACTACATAC | 58.021 | 41.667 | 0.00 | 0.00 | 35.23 | 2.39 |
481 | 482 | 3.861276 | TCCACCAAGTGACTACATACG | 57.139 | 47.619 | 0.00 | 0.00 | 35.23 | 3.06 |
482 | 483 | 2.494471 | TCCACCAAGTGACTACATACGG | 59.506 | 50.000 | 0.00 | 0.00 | 35.23 | 4.02 |
483 | 484 | 2.494471 | CCACCAAGTGACTACATACGGA | 59.506 | 50.000 | 0.00 | 0.00 | 35.23 | 4.69 |
484 | 485 | 3.056393 | CCACCAAGTGACTACATACGGAA | 60.056 | 47.826 | 0.00 | 0.00 | 35.23 | 4.30 |
485 | 486 | 3.924686 | CACCAAGTGACTACATACGGAAC | 59.075 | 47.826 | 0.00 | 0.00 | 35.23 | 3.62 |
486 | 487 | 3.575256 | ACCAAGTGACTACATACGGAACA | 59.425 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
487 | 488 | 4.039488 | ACCAAGTGACTACATACGGAACAA | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
488 | 489 | 4.992319 | CCAAGTGACTACATACGGAACAAA | 59.008 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
489 | 490 | 5.467399 | CCAAGTGACTACATACGGAACAAAA | 59.533 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
490 | 491 | 6.148811 | CCAAGTGACTACATACGGAACAAAAT | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
491 | 492 | 6.721571 | AGTGACTACATACGGAACAAAATG | 57.278 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
492 | 493 | 6.460781 | AGTGACTACATACGGAACAAAATGA | 58.539 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
493 | 494 | 6.590292 | AGTGACTACATACGGAACAAAATGAG | 59.410 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
494 | 495 | 6.367969 | GTGACTACATACGGAACAAAATGAGT | 59.632 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
495 | 496 | 6.367695 | TGACTACATACGGAACAAAATGAGTG | 59.632 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
496 | 497 | 6.460781 | ACTACATACGGAACAAAATGAGTGA | 58.539 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
497 | 498 | 6.932400 | ACTACATACGGAACAAAATGAGTGAA | 59.068 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
498 | 499 | 6.817765 | ACATACGGAACAAAATGAGTGAAT | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
499 | 500 | 6.842163 | ACATACGGAACAAAATGAGTGAATC | 58.158 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
500 | 501 | 6.655003 | ACATACGGAACAAAATGAGTGAATCT | 59.345 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
501 | 502 | 7.822334 | ACATACGGAACAAAATGAGTGAATCTA | 59.178 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
502 | 503 | 6.481954 | ACGGAACAAAATGAGTGAATCTAC | 57.518 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
503 | 504 | 5.995282 | ACGGAACAAAATGAGTGAATCTACA | 59.005 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
504 | 505 | 6.073222 | ACGGAACAAAATGAGTGAATCTACAC | 60.073 | 38.462 | 0.00 | 0.00 | 40.60 | 2.90 |
519 | 520 | 8.969267 | GTGAATCTACACTCTAAAATATGTCCG | 58.031 | 37.037 | 0.00 | 0.00 | 37.73 | 4.79 |
520 | 521 | 7.652105 | TGAATCTACACTCTAAAATATGTCCGC | 59.348 | 37.037 | 0.00 | 0.00 | 0.00 | 5.54 |
521 | 522 | 6.459670 | TCTACACTCTAAAATATGTCCGCA | 57.540 | 37.500 | 0.00 | 0.00 | 0.00 | 5.69 |
522 | 523 | 7.050970 | TCTACACTCTAAAATATGTCCGCAT | 57.949 | 36.000 | 0.00 | 0.00 | 39.03 | 4.73 |
523 | 524 | 8.173542 | TCTACACTCTAAAATATGTCCGCATA | 57.826 | 34.615 | 0.00 | 0.00 | 41.31 | 3.14 |
524 | 525 | 8.080417 | TCTACACTCTAAAATATGTCCGCATAC | 58.920 | 37.037 | 0.00 | 0.00 | 40.05 | 2.39 |
525 | 526 | 6.578944 | ACACTCTAAAATATGTCCGCATACA | 58.421 | 36.000 | 0.00 | 0.00 | 40.05 | 2.29 |
526 | 527 | 7.217200 | ACACTCTAAAATATGTCCGCATACAT | 58.783 | 34.615 | 6.22 | 6.22 | 40.05 | 2.29 |
527 | 528 | 7.385205 | ACACTCTAAAATATGTCCGCATACATC | 59.615 | 37.037 | 4.30 | 0.00 | 40.05 | 3.06 |
528 | 529 | 6.874134 | ACTCTAAAATATGTCCGCATACATCC | 59.126 | 38.462 | 4.30 | 0.00 | 40.05 | 3.51 |
529 | 530 | 5.867174 | TCTAAAATATGTCCGCATACATCCG | 59.133 | 40.000 | 4.30 | 0.00 | 40.05 | 4.18 |
530 | 531 | 3.678056 | AATATGTCCGCATACATCCGT | 57.322 | 42.857 | 4.30 | 0.00 | 40.05 | 4.69 |
531 | 532 | 4.794278 | AATATGTCCGCATACATCCGTA | 57.206 | 40.909 | 4.30 | 0.00 | 40.05 | 4.02 |
532 | 533 | 5.339008 | AATATGTCCGCATACATCCGTAT | 57.661 | 39.130 | 4.30 | 0.00 | 40.05 | 3.06 |
549 | 550 | 9.997482 | ACATCCGTATGTTGTAAATAAAATGTC | 57.003 | 29.630 | 0.00 | 0.00 | 44.07 | 3.06 |
577 | 578 | 9.524106 | AAAAAGACTTACATTTAAAAACGGAGG | 57.476 | 29.630 | 0.00 | 0.00 | 0.00 | 4.30 |
578 | 579 | 6.812879 | AGACTTACATTTAAAAACGGAGGG | 57.187 | 37.500 | 0.00 | 0.00 | 0.00 | 4.30 |
579 | 580 | 6.536447 | AGACTTACATTTAAAAACGGAGGGA | 58.464 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
580 | 581 | 6.653740 | AGACTTACATTTAAAAACGGAGGGAG | 59.346 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
581 | 582 | 6.301486 | ACTTACATTTAAAAACGGAGGGAGT | 58.699 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
582 | 583 | 7.452562 | ACTTACATTTAAAAACGGAGGGAGTA | 58.547 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
583 | 584 | 7.605309 | ACTTACATTTAAAAACGGAGGGAGTAG | 59.395 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
584 | 585 | 5.872963 | ACATTTAAAAACGGAGGGAGTAGT | 58.127 | 37.500 | 0.00 | 0.00 | 0.00 | 2.73 |
585 | 586 | 7.008021 | ACATTTAAAAACGGAGGGAGTAGTA | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
586 | 587 | 7.101700 | ACATTTAAAAACGGAGGGAGTAGTAG | 58.898 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
587 | 588 | 3.606595 | AAAAACGGAGGGAGTAGTAGC | 57.393 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
588 | 589 | 2.226962 | AAACGGAGGGAGTAGTAGCA | 57.773 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
589 | 590 | 2.456073 | AACGGAGGGAGTAGTAGCAT | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
590 | 591 | 3.589951 | AACGGAGGGAGTAGTAGCATA | 57.410 | 47.619 | 0.00 | 0.00 | 0.00 | 3.14 |
591 | 592 | 3.589951 | ACGGAGGGAGTAGTAGCATAA | 57.410 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
592 | 593 | 3.220940 | ACGGAGGGAGTAGTAGCATAAC | 58.779 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
593 | 594 | 3.220110 | CGGAGGGAGTAGTAGCATAACA | 58.780 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
594 | 595 | 3.827302 | CGGAGGGAGTAGTAGCATAACAT | 59.173 | 47.826 | 0.00 | 0.00 | 0.00 | 2.71 |
595 | 596 | 4.281182 | CGGAGGGAGTAGTAGCATAACATT | 59.719 | 45.833 | 0.00 | 0.00 | 0.00 | 2.71 |
596 | 597 | 5.221461 | CGGAGGGAGTAGTAGCATAACATTT | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
597 | 598 | 6.015688 | CGGAGGGAGTAGTAGCATAACATTTA | 60.016 | 42.308 | 0.00 | 0.00 | 0.00 | 1.40 |
598 | 599 | 7.309867 | CGGAGGGAGTAGTAGCATAACATTTAT | 60.310 | 40.741 | 0.00 | 0.00 | 0.00 | 1.40 |
599 | 600 | 8.376270 | GGAGGGAGTAGTAGCATAACATTTATT | 58.624 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
636 | 637 | 8.880991 | TCTACCTATGTTATTATGACCCTCTC | 57.119 | 38.462 | 0.00 | 0.00 | 0.00 | 3.20 |
637 | 638 | 8.679725 | TCTACCTATGTTATTATGACCCTCTCT | 58.320 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
638 | 639 | 7.784470 | ACCTATGTTATTATGACCCTCTCTC | 57.216 | 40.000 | 0.00 | 0.00 | 0.00 | 3.20 |
639 | 640 | 7.540183 | ACCTATGTTATTATGACCCTCTCTCT | 58.460 | 38.462 | 0.00 | 0.00 | 0.00 | 3.10 |
640 | 641 | 8.013667 | ACCTATGTTATTATGACCCTCTCTCTT | 58.986 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
641 | 642 | 8.527810 | CCTATGTTATTATGACCCTCTCTCTTC | 58.472 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
642 | 643 | 9.308000 | CTATGTTATTATGACCCTCTCTCTTCT | 57.692 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
643 | 644 | 7.979786 | TGTTATTATGACCCTCTCTCTTCTT | 57.020 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
644 | 645 | 8.380742 | TGTTATTATGACCCTCTCTCTTCTTT | 57.619 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
645 | 646 | 9.488762 | TGTTATTATGACCCTCTCTCTTCTTTA | 57.511 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
651 | 652 | 8.800370 | ATGACCCTCTCTCTTCTTTAATTTTC | 57.200 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
652 | 653 | 7.978925 | TGACCCTCTCTCTTCTTTAATTTTCT | 58.021 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
653 | 654 | 7.880195 | TGACCCTCTCTCTTCTTTAATTTTCTG | 59.120 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
654 | 655 | 7.750655 | ACCCTCTCTCTTCTTTAATTTTCTGT | 58.249 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
655 | 656 | 7.880713 | ACCCTCTCTCTTCTTTAATTTTCTGTC | 59.119 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
656 | 657 | 7.064016 | CCCTCTCTCTTCTTTAATTTTCTGTCG | 59.936 | 40.741 | 0.00 | 0.00 | 0.00 | 4.35 |
657 | 658 | 7.352719 | TCTCTCTTCTTTAATTTTCTGTCGC | 57.647 | 36.000 | 0.00 | 0.00 | 0.00 | 5.19 |
658 | 659 | 6.929049 | TCTCTCTTCTTTAATTTTCTGTCGCA | 59.071 | 34.615 | 0.00 | 0.00 | 0.00 | 5.10 |
659 | 660 | 7.604164 | TCTCTCTTCTTTAATTTTCTGTCGCAT | 59.396 | 33.333 | 0.00 | 0.00 | 0.00 | 4.73 |
660 | 661 | 8.771920 | TCTCTTCTTTAATTTTCTGTCGCATA | 57.228 | 30.769 | 0.00 | 0.00 | 0.00 | 3.14 |
661 | 662 | 9.214957 | TCTCTTCTTTAATTTTCTGTCGCATAA | 57.785 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
662 | 663 | 9.825972 | CTCTTCTTTAATTTTCTGTCGCATAAA | 57.174 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
671 | 672 | 8.880768 | ATTTTCTGTCGCATAAATATATTCGC | 57.119 | 30.769 | 0.00 | 1.87 | 29.78 | 4.70 |
672 | 673 | 7.414814 | TTTCTGTCGCATAAATATATTCGCA | 57.585 | 32.000 | 0.00 | 1.17 | 29.78 | 5.10 |
673 | 674 | 7.414814 | TTCTGTCGCATAAATATATTCGCAA | 57.585 | 32.000 | 0.00 | 0.00 | 29.78 | 4.85 |
674 | 675 | 7.049140 | TCTGTCGCATAAATATATTCGCAAG | 57.951 | 36.000 | 0.00 | 0.49 | 29.78 | 4.01 |
675 | 676 | 6.645003 | TCTGTCGCATAAATATATTCGCAAGT | 59.355 | 34.615 | 0.00 | 0.00 | 39.48 | 3.16 |
676 | 677 | 6.817396 | TGTCGCATAAATATATTCGCAAGTC | 58.183 | 36.000 | 0.00 | 0.00 | 39.48 | 3.01 |
677 | 678 | 6.128661 | TGTCGCATAAATATATTCGCAAGTCC | 60.129 | 38.462 | 0.00 | 0.00 | 39.48 | 3.85 |
678 | 679 | 5.350365 | TCGCATAAATATATTCGCAAGTCCC | 59.650 | 40.000 | 0.00 | 0.00 | 39.48 | 4.46 |
679 | 680 | 5.351465 | CGCATAAATATATTCGCAAGTCCCT | 59.649 | 40.000 | 0.00 | 0.00 | 39.48 | 4.20 |
680 | 681 | 6.533723 | CGCATAAATATATTCGCAAGTCCCTA | 59.466 | 38.462 | 0.00 | 0.00 | 39.48 | 3.53 |
681 | 682 | 7.064134 | CGCATAAATATATTCGCAAGTCCCTAA | 59.936 | 37.037 | 0.00 | 0.00 | 39.48 | 2.69 |
682 | 683 | 8.391106 | GCATAAATATATTCGCAAGTCCCTAAG | 58.609 | 37.037 | 0.00 | 0.00 | 39.48 | 2.18 |
683 | 684 | 9.436957 | CATAAATATATTCGCAAGTCCCTAAGT | 57.563 | 33.333 | 0.00 | 0.00 | 39.48 | 2.24 |
684 | 685 | 7.964604 | AAATATATTCGCAAGTCCCTAAGTC | 57.035 | 36.000 | 0.00 | 0.00 | 39.48 | 3.01 |
685 | 686 | 6.919775 | ATATATTCGCAAGTCCCTAAGTCT | 57.080 | 37.500 | 0.00 | 0.00 | 39.48 | 3.24 |
686 | 687 | 8.418597 | AATATATTCGCAAGTCCCTAAGTCTA | 57.581 | 34.615 | 0.00 | 0.00 | 39.48 | 2.59 |
687 | 688 | 6.919775 | ATATTCGCAAGTCCCTAAGTCTAT | 57.080 | 37.500 | 0.00 | 0.00 | 39.48 | 1.98 |
688 | 689 | 4.386867 | TTCGCAAGTCCCTAAGTCTATG | 57.613 | 45.455 | 0.00 | 0.00 | 39.48 | 2.23 |
689 | 690 | 2.100916 | TCGCAAGTCCCTAAGTCTATGC | 59.899 | 50.000 | 0.00 | 0.00 | 39.48 | 3.14 |
690 | 691 | 2.803492 | CGCAAGTCCCTAAGTCTATGCC | 60.803 | 54.545 | 0.00 | 0.00 | 0.00 | 4.40 |
691 | 692 | 2.485657 | GCAAGTCCCTAAGTCTATGCCC | 60.486 | 54.545 | 0.00 | 0.00 | 0.00 | 5.36 |
692 | 693 | 2.771943 | CAAGTCCCTAAGTCTATGCCCA | 59.228 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
693 | 694 | 2.683768 | AGTCCCTAAGTCTATGCCCAG | 58.316 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
694 | 695 | 1.070914 | GTCCCTAAGTCTATGCCCAGC | 59.929 | 57.143 | 0.00 | 0.00 | 0.00 | 4.85 |
695 | 696 | 0.398318 | CCCTAAGTCTATGCCCAGCC | 59.602 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
696 | 697 | 1.428869 | CCTAAGTCTATGCCCAGCCT | 58.571 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
697 | 698 | 1.346068 | CCTAAGTCTATGCCCAGCCTC | 59.654 | 57.143 | 0.00 | 0.00 | 0.00 | 4.70 |
698 | 699 | 2.042464 | CTAAGTCTATGCCCAGCCTCA | 58.958 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
699 | 700 | 1.289160 | AAGTCTATGCCCAGCCTCAA | 58.711 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
700 | 701 | 1.289160 | AGTCTATGCCCAGCCTCAAA | 58.711 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
701 | 702 | 1.065126 | AGTCTATGCCCAGCCTCAAAC | 60.065 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
702 | 703 | 0.991146 | TCTATGCCCAGCCTCAAACA | 59.009 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
703 | 704 | 1.354031 | TCTATGCCCAGCCTCAAACAA | 59.646 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
704 | 705 | 1.474077 | CTATGCCCAGCCTCAAACAAC | 59.526 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
705 | 706 | 0.469705 | ATGCCCAGCCTCAAACAACA | 60.470 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
804 | 829 | 2.566010 | CCAACCCAAACATCCGCG | 59.434 | 61.111 | 0.00 | 0.00 | 0.00 | 6.46 |
856 | 884 | 2.597578 | ATCGCCCAATAATTACCCCC | 57.402 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
936 | 964 | 0.104304 | CCCTTCTTATACACGCCGCT | 59.896 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
939 | 972 | 0.103572 | TTCTTATACACGCCGCTCCC | 59.896 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
964 | 997 | 0.247736 | CTCCACTCCAGTACAGCACC | 59.752 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
965 | 998 | 0.471022 | TCCACTCCAGTACAGCACCA | 60.471 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
966 | 999 | 0.036952 | CCACTCCAGTACAGCACCAG | 60.037 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
967 | 1000 | 0.671781 | CACTCCAGTACAGCACCAGC | 60.672 | 60.000 | 0.00 | 0.00 | 42.56 | 4.85 |
968 | 1001 | 1.121407 | ACTCCAGTACAGCACCAGCA | 61.121 | 55.000 | 0.00 | 0.00 | 45.49 | 4.41 |
969 | 1002 | 0.671781 | CTCCAGTACAGCACCAGCAC | 60.672 | 60.000 | 0.00 | 0.00 | 45.49 | 4.40 |
1057 | 1090 | 1.309347 | CTCCTCCTCCTCCTGCTCA | 59.691 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
1099 | 1132 | 1.534235 | AAGCCCGTCCAGACTCAGT | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
1707 | 1752 | 2.344203 | CGAGACCCTCACCTTCGCT | 61.344 | 63.158 | 0.00 | 0.00 | 0.00 | 4.93 |
1944 | 1989 | 3.400054 | GCCCTAGGCTCCACGGTT | 61.400 | 66.667 | 2.05 | 0.00 | 46.69 | 4.44 |
2106 | 2151 | 1.977009 | TGGCGTCATCGTGGACTCT | 60.977 | 57.895 | 0.00 | 0.00 | 39.49 | 3.24 |
2409 | 2454 | 1.805254 | CAACATACAGCAGCAGGGC | 59.195 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
2476 | 2521 | 2.711009 | CCCAGGGGCTGTTAAGATATGA | 59.289 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2477 | 2522 | 3.244700 | CCCAGGGGCTGTTAAGATATGAG | 60.245 | 52.174 | 0.00 | 0.00 | 0.00 | 2.90 |
2623 | 2680 | 3.712907 | TCGGGCAGGGTAAGGTGC | 61.713 | 66.667 | 0.00 | 0.00 | 39.08 | 5.01 |
2659 | 3090 | 5.290885 | GGTTTGTTTGTTCAAGGCTGTAAAG | 59.709 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2698 | 3130 | 5.961421 | ACAGGCTATCTCTCCTTTTTCTACT | 59.039 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2723 | 3167 | 6.597562 | ACTCCATTTTACTAAACACCAGTGA | 58.402 | 36.000 | 4.48 | 0.00 | 0.00 | 3.41 |
2777 | 3233 | 3.434984 | GCTCTCTTTGTTGGATCACACTC | 59.565 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
2893 | 3370 | 1.021390 | ACGAAATTGCCCTCTGCTCG | 61.021 | 55.000 | 0.00 | 0.00 | 42.00 | 5.03 |
2909 | 3386 | 1.939838 | GCTCGGTCGTCATTTGGAAGT | 60.940 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
2918 | 3395 | 4.921515 | TCGTCATTTGGAAGTTCTCTAACG | 59.078 | 41.667 | 2.25 | 6.33 | 40.73 | 3.18 |
2996 | 3749 | 0.966179 | ATTGTCCAGGGCCGAAAAAC | 59.034 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3055 | 3812 | 2.664436 | GGACGGTTTGTTCGCCTCG | 61.664 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
3056 | 3813 | 3.291167 | GACGGTTTGTTCGCCTCGC | 62.291 | 63.158 | 0.00 | 0.00 | 0.00 | 5.03 |
3087 | 3844 | 1.374252 | CGGAGGAGAACGTTGGTGG | 60.374 | 63.158 | 5.00 | 0.00 | 0.00 | 4.61 |
3111 | 3873 | 1.678627 | TGCTTTGCTTTGCCGTTCTTA | 59.321 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
3225 | 3995 | 7.790000 | TCCGAATTTCTTTAAAACACTCGTAG | 58.210 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
3227 | 3997 | 8.702438 | CCGAATTTCTTTAAAACACTCGTAGTA | 58.298 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3354 | 4133 | 0.813184 | CCGGTTTCGCTAGAGGTGTA | 59.187 | 55.000 | 0.00 | 0.00 | 34.56 | 2.90 |
3447 | 4232 | 0.878086 | GCGCCAGCTACTCATCTTCC | 60.878 | 60.000 | 0.00 | 0.00 | 41.01 | 3.46 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 8.571290 | TGCTACTGCGTGTTTAGTGTTTTCAC | 62.571 | 42.308 | 0.00 | 0.00 | 45.72 | 3.18 |
1 | 2 | 4.260456 | GCTACTGCGTGTTTAGTGTTTTCA | 60.260 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
2 | 3 | 4.209112 | GCTACTGCGTGTTTAGTGTTTTC | 58.791 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
9 | 10 | 4.725556 | TTTCTTGCTACTGCGTGTTTAG | 57.274 | 40.909 | 0.00 | 0.00 | 43.34 | 1.85 |
35 | 36 | 1.756950 | CCCGCTCAGCCTGGTAGTA | 60.757 | 63.158 | 0.00 | 0.00 | 0.00 | 1.82 |
36 | 37 | 3.077556 | CCCGCTCAGCCTGGTAGT | 61.078 | 66.667 | 0.00 | 0.00 | 0.00 | 2.73 |
37 | 38 | 3.854669 | CCCCGCTCAGCCTGGTAG | 61.855 | 72.222 | 0.00 | 0.00 | 0.00 | 3.18 |
106 | 107 | 2.409870 | CCATCAGCAAGGCGGAACC | 61.410 | 63.158 | 0.00 | 0.00 | 36.25 | 3.62 |
108 | 109 | 1.675310 | CACCATCAGCAAGGCGGAA | 60.675 | 57.895 | 0.00 | 0.00 | 36.25 | 4.30 |
113 | 114 | 2.345760 | GGGCACACCATCAGCAAGG | 61.346 | 63.158 | 0.00 | 0.00 | 39.85 | 3.61 |
115 | 116 | 2.519949 | TGGGCACACCATCAGCAA | 59.480 | 55.556 | 0.00 | 0.00 | 46.80 | 3.91 |
129 | 130 | 2.159254 | CGGATTTTGTGCCTGTATTGGG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
130 | 131 | 2.735126 | GCGGATTTTGTGCCTGTATTGG | 60.735 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
131 | 132 | 2.529151 | GCGGATTTTGTGCCTGTATTG | 58.471 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
132 | 133 | 1.132262 | CGCGGATTTTGTGCCTGTATT | 59.868 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
133 | 134 | 0.732571 | CGCGGATTTTGTGCCTGTAT | 59.267 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
134 | 135 | 0.604243 | ACGCGGATTTTGTGCCTGTA | 60.604 | 50.000 | 12.47 | 0.00 | 0.00 | 2.74 |
135 | 136 | 1.852067 | GACGCGGATTTTGTGCCTGT | 61.852 | 55.000 | 12.47 | 0.00 | 0.00 | 4.00 |
136 | 137 | 1.154225 | GACGCGGATTTTGTGCCTG | 60.154 | 57.895 | 12.47 | 0.00 | 0.00 | 4.85 |
137 | 138 | 1.577328 | CTGACGCGGATTTTGTGCCT | 61.577 | 55.000 | 12.47 | 0.00 | 0.00 | 4.75 |
138 | 139 | 1.154225 | CTGACGCGGATTTTGTGCC | 60.154 | 57.895 | 12.47 | 0.00 | 0.00 | 5.01 |
139 | 140 | 1.797537 | GCTGACGCGGATTTTGTGC | 60.798 | 57.895 | 12.47 | 0.00 | 0.00 | 4.57 |
140 | 141 | 0.238289 | AAGCTGACGCGGATTTTGTG | 59.762 | 50.000 | 12.47 | 0.00 | 42.32 | 3.33 |
141 | 142 | 0.238289 | CAAGCTGACGCGGATTTTGT | 59.762 | 50.000 | 12.47 | 0.00 | 42.32 | 2.83 |
142 | 143 | 1.067199 | GCAAGCTGACGCGGATTTTG | 61.067 | 55.000 | 12.47 | 9.50 | 42.32 | 2.44 |
143 | 144 | 1.210155 | GCAAGCTGACGCGGATTTT | 59.790 | 52.632 | 12.47 | 0.00 | 42.32 | 1.82 |
144 | 145 | 2.870372 | GCAAGCTGACGCGGATTT | 59.130 | 55.556 | 12.47 | 0.00 | 42.32 | 2.17 |
164 | 165 | 4.326255 | CGGGGAGCAAGAGCAAAT | 57.674 | 55.556 | 0.00 | 0.00 | 45.49 | 2.32 |
195 | 196 | 4.201679 | TATCGGCGGTGGAGCGTG | 62.202 | 66.667 | 7.21 | 0.00 | 38.18 | 5.34 |
196 | 197 | 4.203076 | GTATCGGCGGTGGAGCGT | 62.203 | 66.667 | 7.21 | 0.00 | 38.18 | 5.07 |
199 | 200 | 4.944372 | GGCGTATCGGCGGTGGAG | 62.944 | 72.222 | 7.21 | 0.00 | 43.33 | 3.86 |
207 | 208 | 2.581409 | GTGGTGTCGGCGTATCGG | 60.581 | 66.667 | 6.85 | 0.00 | 0.00 | 4.18 |
208 | 209 | 2.156446 | GTGTGGTGTCGGCGTATCG | 61.156 | 63.158 | 6.85 | 0.00 | 0.00 | 2.92 |
247 | 248 | 0.105194 | TGACTGTGGGAAGACCTGGA | 60.105 | 55.000 | 0.00 | 0.00 | 41.11 | 3.86 |
267 | 268 | 3.077359 | CAGATTTGACTGTGGGAAGACC | 58.923 | 50.000 | 0.00 | 0.00 | 40.81 | 3.85 |
277 | 278 | 2.082231 | CCAGCCTGACAGATTTGACTG | 58.918 | 52.381 | 3.32 | 0.00 | 42.78 | 3.51 |
278 | 279 | 1.701847 | ACCAGCCTGACAGATTTGACT | 59.298 | 47.619 | 3.32 | 0.00 | 0.00 | 3.41 |
279 | 280 | 2.079925 | GACCAGCCTGACAGATTTGAC | 58.920 | 52.381 | 3.32 | 0.00 | 0.00 | 3.18 |
280 | 281 | 1.699083 | TGACCAGCCTGACAGATTTGA | 59.301 | 47.619 | 3.32 | 0.00 | 0.00 | 2.69 |
281 | 282 | 2.189594 | TGACCAGCCTGACAGATTTG | 57.810 | 50.000 | 3.32 | 0.00 | 0.00 | 2.32 |
282 | 283 | 3.521126 | ACTATGACCAGCCTGACAGATTT | 59.479 | 43.478 | 3.32 | 0.00 | 0.00 | 2.17 |
283 | 284 | 3.110705 | ACTATGACCAGCCTGACAGATT | 58.889 | 45.455 | 3.32 | 0.00 | 0.00 | 2.40 |
284 | 285 | 2.433604 | CACTATGACCAGCCTGACAGAT | 59.566 | 50.000 | 3.32 | 0.00 | 0.00 | 2.90 |
285 | 286 | 1.827344 | CACTATGACCAGCCTGACAGA | 59.173 | 52.381 | 3.32 | 0.00 | 0.00 | 3.41 |
286 | 287 | 1.134580 | CCACTATGACCAGCCTGACAG | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
287 | 288 | 0.904649 | CCACTATGACCAGCCTGACA | 59.095 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
288 | 289 | 1.195115 | TCCACTATGACCAGCCTGAC | 58.805 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
289 | 290 | 1.951209 | TTCCACTATGACCAGCCTGA | 58.049 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
290 | 291 | 2.026822 | ACTTTCCACTATGACCAGCCTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
291 | 292 | 2.269940 | ACTTTCCACTATGACCAGCCT | 58.730 | 47.619 | 0.00 | 0.00 | 0.00 | 4.58 |
292 | 293 | 2.789409 | ACTTTCCACTATGACCAGCC | 57.211 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
293 | 294 | 4.575885 | TGTTACTTTCCACTATGACCAGC | 58.424 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
294 | 295 | 9.477484 | GTATATGTTACTTTCCACTATGACCAG | 57.523 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
295 | 296 | 9.209048 | AGTATATGTTACTTTCCACTATGACCA | 57.791 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
335 | 336 | 9.170584 | CGGATGTAATATTATACACTAGCATCG | 57.829 | 37.037 | 0.00 | 0.00 | 38.53 | 3.84 |
342 | 343 | 8.799367 | TGCACTACGGATGTAATATTATACACT | 58.201 | 33.333 | 0.00 | 0.00 | 38.53 | 3.55 |
343 | 344 | 8.975410 | TGCACTACGGATGTAATATTATACAC | 57.025 | 34.615 | 0.00 | 0.00 | 38.53 | 2.90 |
350 | 351 | 9.185680 | TGATACTATGCACTACGGATGTAATAT | 57.814 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
351 | 352 | 8.570068 | TGATACTATGCACTACGGATGTAATA | 57.430 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
352 | 353 | 7.462571 | TGATACTATGCACTACGGATGTAAT | 57.537 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
353 | 354 | 6.887626 | TGATACTATGCACTACGGATGTAA | 57.112 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
354 | 355 | 8.570068 | TTATGATACTATGCACTACGGATGTA | 57.430 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
355 | 356 | 5.984695 | ATGATACTATGCACTACGGATGT | 57.015 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
356 | 357 | 8.757164 | TTTTATGATACTATGCACTACGGATG | 57.243 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
359 | 360 | 9.856488 | ACTATTTTATGATACTATGCACTACGG | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
383 | 384 | 9.664332 | GCAATAAATGAGACCATCTATGATACT | 57.336 | 33.333 | 0.00 | 0.00 | 31.40 | 2.12 |
384 | 385 | 9.664332 | AGCAATAAATGAGACCATCTATGATAC | 57.336 | 33.333 | 0.00 | 0.00 | 31.40 | 2.24 |
387 | 388 | 9.662947 | CATAGCAATAAATGAGACCATCTATGA | 57.337 | 33.333 | 0.00 | 0.00 | 34.92 | 2.15 |
388 | 389 | 8.396390 | GCATAGCAATAAATGAGACCATCTATG | 58.604 | 37.037 | 0.00 | 0.00 | 35.45 | 2.23 |
389 | 390 | 8.105197 | TGCATAGCAATAAATGAGACCATCTAT | 58.895 | 33.333 | 0.00 | 0.00 | 34.76 | 1.98 |
390 | 391 | 7.452562 | TGCATAGCAATAAATGAGACCATCTA | 58.547 | 34.615 | 0.00 | 0.00 | 34.76 | 1.98 |
391 | 392 | 6.301486 | TGCATAGCAATAAATGAGACCATCT | 58.699 | 36.000 | 0.00 | 0.00 | 34.76 | 2.90 |
392 | 393 | 6.564709 | TGCATAGCAATAAATGAGACCATC | 57.435 | 37.500 | 0.00 | 0.00 | 34.76 | 3.51 |
393 | 394 | 6.717997 | TCATGCATAGCAATAAATGAGACCAT | 59.282 | 34.615 | 0.00 | 0.00 | 43.62 | 3.55 |
394 | 395 | 6.016860 | GTCATGCATAGCAATAAATGAGACCA | 60.017 | 38.462 | 0.00 | 0.00 | 43.62 | 4.02 |
395 | 396 | 6.016860 | TGTCATGCATAGCAATAAATGAGACC | 60.017 | 38.462 | 0.00 | 0.00 | 43.62 | 3.85 |
396 | 397 | 6.854892 | GTGTCATGCATAGCAATAAATGAGAC | 59.145 | 38.462 | 0.00 | 0.00 | 43.62 | 3.36 |
397 | 398 | 6.543100 | TGTGTCATGCATAGCAATAAATGAGA | 59.457 | 34.615 | 0.00 | 0.00 | 43.62 | 3.27 |
398 | 399 | 6.731164 | TGTGTCATGCATAGCAATAAATGAG | 58.269 | 36.000 | 0.00 | 0.00 | 43.62 | 2.90 |
399 | 400 | 6.696441 | TGTGTCATGCATAGCAATAAATGA | 57.304 | 33.333 | 0.00 | 0.00 | 43.62 | 2.57 |
400 | 401 | 8.294577 | AGTATGTGTCATGCATAGCAATAAATG | 58.705 | 33.333 | 0.00 | 0.00 | 43.62 | 2.32 |
401 | 402 | 8.400184 | AGTATGTGTCATGCATAGCAATAAAT | 57.600 | 30.769 | 0.00 | 0.00 | 43.62 | 1.40 |
402 | 403 | 7.041167 | GGAGTATGTGTCATGCATAGCAATAAA | 60.041 | 37.037 | 0.00 | 0.00 | 43.62 | 1.40 |
403 | 404 | 6.427853 | GGAGTATGTGTCATGCATAGCAATAA | 59.572 | 38.462 | 0.00 | 0.00 | 43.62 | 1.40 |
404 | 405 | 5.934043 | GGAGTATGTGTCATGCATAGCAATA | 59.066 | 40.000 | 0.00 | 0.85 | 43.62 | 1.90 |
405 | 406 | 4.758674 | GGAGTATGTGTCATGCATAGCAAT | 59.241 | 41.667 | 0.00 | 1.69 | 43.62 | 3.56 |
406 | 407 | 4.129380 | GGAGTATGTGTCATGCATAGCAA | 58.871 | 43.478 | 0.00 | 0.00 | 43.62 | 3.91 |
407 | 408 | 3.494924 | GGGAGTATGTGTCATGCATAGCA | 60.495 | 47.826 | 0.00 | 0.00 | 44.86 | 3.49 |
408 | 409 | 3.070018 | GGGAGTATGTGTCATGCATAGC | 58.930 | 50.000 | 0.00 | 0.00 | 30.45 | 2.97 |
409 | 410 | 4.562347 | GGAGGGAGTATGTGTCATGCATAG | 60.562 | 50.000 | 0.00 | 0.00 | 30.45 | 2.23 |
410 | 411 | 3.324846 | GGAGGGAGTATGTGTCATGCATA | 59.675 | 47.826 | 0.00 | 0.00 | 0.00 | 3.14 |
411 | 412 | 2.105477 | GGAGGGAGTATGTGTCATGCAT | 59.895 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
412 | 413 | 1.486310 | GGAGGGAGTATGTGTCATGCA | 59.514 | 52.381 | 0.00 | 0.00 | 0.00 | 3.96 |
413 | 414 | 1.539065 | CGGAGGGAGTATGTGTCATGC | 60.539 | 57.143 | 0.00 | 0.00 | 0.00 | 4.06 |
414 | 415 | 1.757118 | ACGGAGGGAGTATGTGTCATG | 59.243 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
415 | 416 | 2.160721 | ACGGAGGGAGTATGTGTCAT | 57.839 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
416 | 417 | 1.822990 | GAACGGAGGGAGTATGTGTCA | 59.177 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
417 | 418 | 1.136500 | GGAACGGAGGGAGTATGTGTC | 59.864 | 57.143 | 0.00 | 0.00 | 0.00 | 3.67 |
418 | 419 | 1.192428 | GGAACGGAGGGAGTATGTGT | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
419 | 420 | 1.191535 | TGGAACGGAGGGAGTATGTG | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
420 | 421 | 1.946984 | TTGGAACGGAGGGAGTATGT | 58.053 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
421 | 422 | 3.343941 | TTTTGGAACGGAGGGAGTATG | 57.656 | 47.619 | 0.00 | 0.00 | 0.00 | 2.39 |
422 | 423 | 5.906772 | ATATTTTGGAACGGAGGGAGTAT | 57.093 | 39.130 | 0.00 | 0.00 | 0.00 | 2.12 |
423 | 424 | 6.384886 | ACTTATATTTTGGAACGGAGGGAGTA | 59.615 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
424 | 425 | 5.191124 | ACTTATATTTTGGAACGGAGGGAGT | 59.809 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
425 | 426 | 5.681639 | ACTTATATTTTGGAACGGAGGGAG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
426 | 427 | 5.427481 | AGACTTATATTTTGGAACGGAGGGA | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
427 | 428 | 5.681639 | AGACTTATATTTTGGAACGGAGGG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
428 | 429 | 7.553044 | AGAAAGACTTATATTTTGGAACGGAGG | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
429 | 430 | 8.494016 | AGAAAGACTTATATTTTGGAACGGAG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
430 | 431 | 9.595823 | CTAGAAAGACTTATATTTTGGAACGGA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
431 | 432 | 9.595823 | TCTAGAAAGACTTATATTTTGGAACGG | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
441 | 442 | 9.661954 | TGGTGGAATCTCTAGAAAGACTTATAT | 57.338 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
442 | 443 | 9.488762 | TTGGTGGAATCTCTAGAAAGACTTATA | 57.511 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
443 | 444 | 7.979786 | TGGTGGAATCTCTAGAAAGACTTAT | 57.020 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
444 | 445 | 7.455008 | ACTTGGTGGAATCTCTAGAAAGACTTA | 59.545 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
445 | 446 | 6.271159 | ACTTGGTGGAATCTCTAGAAAGACTT | 59.729 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
446 | 447 | 5.782845 | ACTTGGTGGAATCTCTAGAAAGACT | 59.217 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
447 | 448 | 5.872070 | CACTTGGTGGAATCTCTAGAAAGAC | 59.128 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
448 | 449 | 5.780282 | TCACTTGGTGGAATCTCTAGAAAGA | 59.220 | 40.000 | 0.00 | 0.00 | 33.87 | 2.52 |
449 | 450 | 5.872070 | GTCACTTGGTGGAATCTCTAGAAAG | 59.128 | 44.000 | 0.00 | 0.00 | 33.87 | 2.62 |
450 | 451 | 5.544176 | AGTCACTTGGTGGAATCTCTAGAAA | 59.456 | 40.000 | 0.00 | 0.00 | 33.87 | 2.52 |
451 | 452 | 5.087323 | AGTCACTTGGTGGAATCTCTAGAA | 58.913 | 41.667 | 0.00 | 0.00 | 33.87 | 2.10 |
452 | 453 | 4.678256 | AGTCACTTGGTGGAATCTCTAGA | 58.322 | 43.478 | 0.00 | 0.00 | 33.87 | 2.43 |
453 | 454 | 5.419155 | TGTAGTCACTTGGTGGAATCTCTAG | 59.581 | 44.000 | 0.00 | 0.00 | 33.87 | 2.43 |
454 | 455 | 5.330233 | TGTAGTCACTTGGTGGAATCTCTA | 58.670 | 41.667 | 0.00 | 0.00 | 33.87 | 2.43 |
455 | 456 | 4.160329 | TGTAGTCACTTGGTGGAATCTCT | 58.840 | 43.478 | 0.00 | 0.00 | 33.87 | 3.10 |
456 | 457 | 4.537135 | TGTAGTCACTTGGTGGAATCTC | 57.463 | 45.455 | 0.00 | 0.00 | 33.87 | 2.75 |
457 | 458 | 5.394224 | CGTATGTAGTCACTTGGTGGAATCT | 60.394 | 44.000 | 0.00 | 0.00 | 33.87 | 2.40 |
458 | 459 | 4.804139 | CGTATGTAGTCACTTGGTGGAATC | 59.196 | 45.833 | 0.00 | 0.00 | 33.87 | 2.52 |
459 | 460 | 4.382685 | CCGTATGTAGTCACTTGGTGGAAT | 60.383 | 45.833 | 0.00 | 0.00 | 33.87 | 3.01 |
460 | 461 | 3.056393 | CCGTATGTAGTCACTTGGTGGAA | 60.056 | 47.826 | 0.00 | 0.00 | 33.87 | 3.53 |
461 | 462 | 2.494471 | CCGTATGTAGTCACTTGGTGGA | 59.506 | 50.000 | 0.00 | 0.00 | 33.87 | 4.02 |
462 | 463 | 2.494471 | TCCGTATGTAGTCACTTGGTGG | 59.506 | 50.000 | 0.00 | 0.00 | 33.87 | 4.61 |
463 | 464 | 3.861276 | TCCGTATGTAGTCACTTGGTG | 57.139 | 47.619 | 0.00 | 0.00 | 34.45 | 4.17 |
464 | 465 | 3.575256 | TGTTCCGTATGTAGTCACTTGGT | 59.425 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
465 | 466 | 4.182693 | TGTTCCGTATGTAGTCACTTGG | 57.817 | 45.455 | 0.00 | 0.00 | 0.00 | 3.61 |
466 | 467 | 6.533819 | TTTTGTTCCGTATGTAGTCACTTG | 57.466 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
467 | 468 | 6.932400 | TCATTTTGTTCCGTATGTAGTCACTT | 59.068 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
468 | 469 | 6.460781 | TCATTTTGTTCCGTATGTAGTCACT | 58.539 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
469 | 470 | 6.367969 | ACTCATTTTGTTCCGTATGTAGTCAC | 59.632 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
470 | 471 | 6.367695 | CACTCATTTTGTTCCGTATGTAGTCA | 59.632 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
471 | 472 | 6.588756 | TCACTCATTTTGTTCCGTATGTAGTC | 59.411 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
472 | 473 | 6.460781 | TCACTCATTTTGTTCCGTATGTAGT | 58.539 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
473 | 474 | 6.961359 | TCACTCATTTTGTTCCGTATGTAG | 57.039 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
474 | 475 | 7.822334 | AGATTCACTCATTTTGTTCCGTATGTA | 59.178 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
475 | 476 | 6.655003 | AGATTCACTCATTTTGTTCCGTATGT | 59.345 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
476 | 477 | 7.076842 | AGATTCACTCATTTTGTTCCGTATG | 57.923 | 36.000 | 0.00 | 0.00 | 0.00 | 2.39 |
477 | 478 | 7.822334 | TGTAGATTCACTCATTTTGTTCCGTAT | 59.178 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
478 | 479 | 7.117236 | GTGTAGATTCACTCATTTTGTTCCGTA | 59.883 | 37.037 | 0.00 | 0.00 | 35.68 | 4.02 |
479 | 480 | 5.995282 | TGTAGATTCACTCATTTTGTTCCGT | 59.005 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
480 | 481 | 6.147821 | AGTGTAGATTCACTCATTTTGTTCCG | 59.852 | 38.462 | 0.00 | 0.00 | 44.07 | 4.30 |
481 | 482 | 7.440523 | AGTGTAGATTCACTCATTTTGTTCC | 57.559 | 36.000 | 0.00 | 0.00 | 44.07 | 3.62 |
493 | 494 | 8.969267 | CGGACATATTTTAGAGTGTAGATTCAC | 58.031 | 37.037 | 0.00 | 0.00 | 38.46 | 3.18 |
494 | 495 | 7.652105 | GCGGACATATTTTAGAGTGTAGATTCA | 59.348 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
495 | 496 | 7.652105 | TGCGGACATATTTTAGAGTGTAGATTC | 59.348 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
496 | 497 | 7.497595 | TGCGGACATATTTTAGAGTGTAGATT | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
497 | 498 | 7.050970 | TGCGGACATATTTTAGAGTGTAGAT | 57.949 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
498 | 499 | 6.459670 | TGCGGACATATTTTAGAGTGTAGA | 57.540 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
499 | 500 | 7.865889 | TGTATGCGGACATATTTTAGAGTGTAG | 59.134 | 37.037 | 0.00 | 0.00 | 40.79 | 2.74 |
500 | 501 | 7.718525 | TGTATGCGGACATATTTTAGAGTGTA | 58.281 | 34.615 | 0.00 | 0.00 | 40.79 | 2.90 |
501 | 502 | 6.578944 | TGTATGCGGACATATTTTAGAGTGT | 58.421 | 36.000 | 0.00 | 0.00 | 40.79 | 3.55 |
502 | 503 | 7.148573 | GGATGTATGCGGACATATTTTAGAGTG | 60.149 | 40.741 | 3.46 | 0.00 | 40.18 | 3.51 |
503 | 504 | 6.874134 | GGATGTATGCGGACATATTTTAGAGT | 59.126 | 38.462 | 3.46 | 0.00 | 40.18 | 3.24 |
504 | 505 | 6.035005 | CGGATGTATGCGGACATATTTTAGAG | 59.965 | 42.308 | 3.46 | 0.00 | 40.18 | 2.43 |
505 | 506 | 5.867174 | CGGATGTATGCGGACATATTTTAGA | 59.133 | 40.000 | 3.46 | 0.00 | 40.18 | 2.10 |
506 | 507 | 5.637810 | ACGGATGTATGCGGACATATTTTAG | 59.362 | 40.000 | 10.41 | 0.00 | 46.28 | 1.85 |
507 | 508 | 5.543714 | ACGGATGTATGCGGACATATTTTA | 58.456 | 37.500 | 10.41 | 0.00 | 46.28 | 1.52 |
508 | 509 | 4.385825 | ACGGATGTATGCGGACATATTTT | 58.614 | 39.130 | 10.41 | 0.00 | 46.28 | 1.82 |
509 | 510 | 4.002906 | ACGGATGTATGCGGACATATTT | 57.997 | 40.909 | 10.41 | 0.00 | 46.28 | 1.40 |
510 | 511 | 3.678056 | ACGGATGTATGCGGACATATT | 57.322 | 42.857 | 10.41 | 0.00 | 46.28 | 1.28 |
551 | 552 | 9.524106 | CCTCCGTTTTTAAATGTAAGTCTTTTT | 57.476 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
552 | 553 | 8.139350 | CCCTCCGTTTTTAAATGTAAGTCTTTT | 58.861 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
553 | 554 | 7.503230 | TCCCTCCGTTTTTAAATGTAAGTCTTT | 59.497 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
554 | 555 | 6.999871 | TCCCTCCGTTTTTAAATGTAAGTCTT | 59.000 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
555 | 556 | 6.536447 | TCCCTCCGTTTTTAAATGTAAGTCT | 58.464 | 36.000 | 0.00 | 0.00 | 0.00 | 3.24 |
556 | 557 | 6.429078 | ACTCCCTCCGTTTTTAAATGTAAGTC | 59.571 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
557 | 558 | 6.301486 | ACTCCCTCCGTTTTTAAATGTAAGT | 58.699 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
558 | 559 | 6.812879 | ACTCCCTCCGTTTTTAAATGTAAG | 57.187 | 37.500 | 0.00 | 0.00 | 0.00 | 2.34 |
559 | 560 | 7.452562 | ACTACTCCCTCCGTTTTTAAATGTAA | 58.547 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
560 | 561 | 7.008021 | ACTACTCCCTCCGTTTTTAAATGTA | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
561 | 562 | 5.872963 | ACTACTCCCTCCGTTTTTAAATGT | 58.127 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
562 | 563 | 6.036844 | GCTACTACTCCCTCCGTTTTTAAATG | 59.963 | 42.308 | 0.00 | 0.00 | 0.00 | 2.32 |
563 | 564 | 6.111382 | GCTACTACTCCCTCCGTTTTTAAAT | 58.889 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
564 | 565 | 5.011943 | TGCTACTACTCCCTCCGTTTTTAAA | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
565 | 566 | 4.527816 | TGCTACTACTCCCTCCGTTTTTAA | 59.472 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
566 | 567 | 4.088634 | TGCTACTACTCCCTCCGTTTTTA | 58.911 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
567 | 568 | 2.901839 | TGCTACTACTCCCTCCGTTTTT | 59.098 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
568 | 569 | 2.532843 | TGCTACTACTCCCTCCGTTTT | 58.467 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
569 | 570 | 2.226962 | TGCTACTACTCCCTCCGTTT | 57.773 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
570 | 571 | 2.456073 | ATGCTACTACTCCCTCCGTT | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
571 | 572 | 3.220940 | GTTATGCTACTACTCCCTCCGT | 58.779 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
572 | 573 | 3.220110 | TGTTATGCTACTACTCCCTCCG | 58.780 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
573 | 574 | 5.810080 | AATGTTATGCTACTACTCCCTCC | 57.190 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
610 | 611 | 9.482175 | GAGAGGGTCATAATAACATAGGTAGAT | 57.518 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
611 | 612 | 8.679725 | AGAGAGGGTCATAATAACATAGGTAGA | 58.320 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
612 | 613 | 8.887264 | AGAGAGGGTCATAATAACATAGGTAG | 57.113 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
613 | 614 | 8.679725 | AGAGAGAGGGTCATAATAACATAGGTA | 58.320 | 37.037 | 0.00 | 0.00 | 0.00 | 3.08 |
614 | 615 | 7.540183 | AGAGAGAGGGTCATAATAACATAGGT | 58.460 | 38.462 | 0.00 | 0.00 | 0.00 | 3.08 |
615 | 616 | 8.429237 | AAGAGAGAGGGTCATAATAACATAGG | 57.571 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
616 | 617 | 9.308000 | AGAAGAGAGAGGGTCATAATAACATAG | 57.692 | 37.037 | 0.00 | 0.00 | 0.00 | 2.23 |
617 | 618 | 9.661954 | AAGAAGAGAGAGGGTCATAATAACATA | 57.338 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
618 | 619 | 8.560124 | AAGAAGAGAGAGGGTCATAATAACAT | 57.440 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
619 | 620 | 7.979786 | AAGAAGAGAGAGGGTCATAATAACA | 57.020 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
625 | 626 | 9.892130 | GAAAATTAAAGAAGAGAGAGGGTCATA | 57.108 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
626 | 627 | 8.610369 | AGAAAATTAAAGAAGAGAGAGGGTCAT | 58.390 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
627 | 628 | 7.880195 | CAGAAAATTAAAGAAGAGAGAGGGTCA | 59.120 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
628 | 629 | 7.880713 | ACAGAAAATTAAAGAAGAGAGAGGGTC | 59.119 | 37.037 | 0.00 | 0.00 | 0.00 | 4.46 |
629 | 630 | 7.750655 | ACAGAAAATTAAAGAAGAGAGAGGGT | 58.249 | 34.615 | 0.00 | 0.00 | 0.00 | 4.34 |
630 | 631 | 7.064016 | CGACAGAAAATTAAAGAAGAGAGAGGG | 59.936 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
631 | 632 | 7.412455 | GCGACAGAAAATTAAAGAAGAGAGAGG | 60.412 | 40.741 | 0.00 | 0.00 | 0.00 | 3.69 |
632 | 633 | 7.116948 | TGCGACAGAAAATTAAAGAAGAGAGAG | 59.883 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
633 | 634 | 6.929049 | TGCGACAGAAAATTAAAGAAGAGAGA | 59.071 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
634 | 635 | 7.121974 | TGCGACAGAAAATTAAAGAAGAGAG | 57.878 | 36.000 | 0.00 | 0.00 | 0.00 | 3.20 |
635 | 636 | 7.672983 | ATGCGACAGAAAATTAAAGAAGAGA | 57.327 | 32.000 | 0.00 | 0.00 | 0.00 | 3.10 |
636 | 637 | 9.825972 | TTTATGCGACAGAAAATTAAAGAAGAG | 57.174 | 29.630 | 0.00 | 0.00 | 0.00 | 2.85 |
645 | 646 | 9.329913 | GCGAATATATTTATGCGACAGAAAATT | 57.670 | 29.630 | 7.65 | 1.38 | 38.91 | 1.82 |
646 | 647 | 8.503196 | TGCGAATATATTTATGCGACAGAAAAT | 58.497 | 29.630 | 7.65 | 6.16 | 38.91 | 1.82 |
647 | 648 | 7.856556 | TGCGAATATATTTATGCGACAGAAAA | 58.143 | 30.769 | 7.65 | 0.24 | 38.91 | 2.29 |
648 | 649 | 7.414814 | TGCGAATATATTTATGCGACAGAAA | 57.585 | 32.000 | 7.65 | 2.94 | 38.91 | 2.52 |
649 | 650 | 7.170828 | ACTTGCGAATATATTTATGCGACAGAA | 59.829 | 33.333 | 7.65 | 0.00 | 38.91 | 3.02 |
650 | 651 | 6.645003 | ACTTGCGAATATATTTATGCGACAGA | 59.355 | 34.615 | 7.65 | 0.00 | 38.91 | 3.41 |
651 | 652 | 6.821482 | ACTTGCGAATATATTTATGCGACAG | 58.179 | 36.000 | 7.65 | 4.80 | 38.91 | 3.51 |
652 | 653 | 6.128661 | GGACTTGCGAATATATTTATGCGACA | 60.129 | 38.462 | 7.65 | 3.00 | 38.91 | 4.35 |
653 | 654 | 6.241385 | GGACTTGCGAATATATTTATGCGAC | 58.759 | 40.000 | 7.65 | 0.70 | 38.91 | 5.19 |
654 | 655 | 5.350365 | GGGACTTGCGAATATATTTATGCGA | 59.650 | 40.000 | 7.65 | 7.80 | 38.91 | 5.10 |
655 | 656 | 5.351465 | AGGGACTTGCGAATATATTTATGCG | 59.649 | 40.000 | 0.00 | 0.00 | 35.94 | 4.73 |
656 | 657 | 6.743575 | AGGGACTTGCGAATATATTTATGC | 57.256 | 37.500 | 0.00 | 5.53 | 27.25 | 3.14 |
657 | 658 | 9.436957 | ACTTAGGGACTTGCGAATATATTTATG | 57.563 | 33.333 | 0.00 | 0.00 | 41.75 | 1.90 |
658 | 659 | 9.654663 | GACTTAGGGACTTGCGAATATATTTAT | 57.345 | 33.333 | 0.00 | 0.00 | 41.75 | 1.40 |
659 | 660 | 8.867097 | AGACTTAGGGACTTGCGAATATATTTA | 58.133 | 33.333 | 0.00 | 0.00 | 41.75 | 1.40 |
660 | 661 | 7.736893 | AGACTTAGGGACTTGCGAATATATTT | 58.263 | 34.615 | 0.00 | 0.00 | 41.75 | 1.40 |
661 | 662 | 7.304497 | AGACTTAGGGACTTGCGAATATATT | 57.696 | 36.000 | 0.00 | 0.00 | 41.75 | 1.28 |
662 | 663 | 6.919775 | AGACTTAGGGACTTGCGAATATAT | 57.080 | 37.500 | 0.00 | 0.00 | 41.75 | 0.86 |
663 | 664 | 7.577046 | GCATAGACTTAGGGACTTGCGAATATA | 60.577 | 40.741 | 0.00 | 0.00 | 41.75 | 0.86 |
664 | 665 | 6.692486 | CATAGACTTAGGGACTTGCGAATAT | 58.308 | 40.000 | 0.00 | 0.00 | 41.75 | 1.28 |
665 | 666 | 5.509163 | GCATAGACTTAGGGACTTGCGAATA | 60.509 | 44.000 | 0.00 | 0.00 | 41.75 | 1.75 |
666 | 667 | 4.740934 | GCATAGACTTAGGGACTTGCGAAT | 60.741 | 45.833 | 0.00 | 0.00 | 41.75 | 3.34 |
667 | 668 | 3.430374 | GCATAGACTTAGGGACTTGCGAA | 60.430 | 47.826 | 0.00 | 0.00 | 41.75 | 4.70 |
668 | 669 | 2.100916 | GCATAGACTTAGGGACTTGCGA | 59.899 | 50.000 | 0.00 | 0.00 | 41.75 | 5.10 |
669 | 670 | 2.474816 | GCATAGACTTAGGGACTTGCG | 58.525 | 52.381 | 0.00 | 0.00 | 41.75 | 4.85 |
670 | 671 | 2.485657 | GGGCATAGACTTAGGGACTTGC | 60.486 | 54.545 | 0.00 | 0.00 | 41.75 | 4.01 |
671 | 672 | 2.771943 | TGGGCATAGACTTAGGGACTTG | 59.228 | 50.000 | 0.00 | 0.00 | 41.75 | 3.16 |
672 | 673 | 3.041946 | CTGGGCATAGACTTAGGGACTT | 58.958 | 50.000 | 0.00 | 0.00 | 41.75 | 3.01 |
673 | 674 | 2.683768 | CTGGGCATAGACTTAGGGACT | 58.316 | 52.381 | 0.00 | 0.00 | 46.37 | 3.85 |
674 | 675 | 1.070914 | GCTGGGCATAGACTTAGGGAC | 59.929 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
675 | 676 | 1.424638 | GCTGGGCATAGACTTAGGGA | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
676 | 677 | 0.398318 | GGCTGGGCATAGACTTAGGG | 59.602 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
677 | 678 | 1.346068 | GAGGCTGGGCATAGACTTAGG | 59.654 | 57.143 | 0.00 | 0.00 | 35.77 | 2.69 |
678 | 679 | 2.042464 | TGAGGCTGGGCATAGACTTAG | 58.958 | 52.381 | 0.00 | 0.00 | 35.77 | 2.18 |
679 | 680 | 2.174685 | TGAGGCTGGGCATAGACTTA | 57.825 | 50.000 | 0.00 | 0.00 | 35.77 | 2.24 |
680 | 681 | 1.289160 | TTGAGGCTGGGCATAGACTT | 58.711 | 50.000 | 0.00 | 0.00 | 35.77 | 3.01 |
681 | 682 | 1.065126 | GTTTGAGGCTGGGCATAGACT | 60.065 | 52.381 | 0.00 | 0.00 | 39.24 | 3.24 |
682 | 683 | 1.340017 | TGTTTGAGGCTGGGCATAGAC | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
683 | 684 | 0.991146 | TGTTTGAGGCTGGGCATAGA | 59.009 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
684 | 685 | 1.474077 | GTTGTTTGAGGCTGGGCATAG | 59.526 | 52.381 | 0.00 | 0.00 | 0.00 | 2.23 |
685 | 686 | 1.202989 | TGTTGTTTGAGGCTGGGCATA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.14 |
686 | 687 | 0.469705 | TGTTGTTTGAGGCTGGGCAT | 60.470 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
687 | 688 | 0.685785 | TTGTTGTTTGAGGCTGGGCA | 60.686 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
688 | 689 | 0.463620 | TTTGTTGTTTGAGGCTGGGC | 59.536 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
689 | 690 | 2.093764 | TGTTTTGTTGTTTGAGGCTGGG | 60.094 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
690 | 691 | 3.244033 | TGTTTTGTTGTTTGAGGCTGG | 57.756 | 42.857 | 0.00 | 0.00 | 0.00 | 4.85 |
691 | 692 | 4.091800 | CACTTGTTTTGTTGTTTGAGGCTG | 59.908 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
692 | 693 | 4.244862 | CACTTGTTTTGTTGTTTGAGGCT | 58.755 | 39.130 | 0.00 | 0.00 | 0.00 | 4.58 |
693 | 694 | 3.993736 | ACACTTGTTTTGTTGTTTGAGGC | 59.006 | 39.130 | 0.00 | 0.00 | 0.00 | 4.70 |
694 | 695 | 4.625311 | GGACACTTGTTTTGTTGTTTGAGG | 59.375 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
695 | 696 | 5.118510 | GTGGACACTTGTTTTGTTGTTTGAG | 59.881 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
696 | 697 | 4.985409 | GTGGACACTTGTTTTGTTGTTTGA | 59.015 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
697 | 698 | 4.987912 | AGTGGACACTTGTTTTGTTGTTTG | 59.012 | 37.500 | 0.00 | 0.00 | 38.83 | 2.93 |
698 | 699 | 5.208463 | AGTGGACACTTGTTTTGTTGTTT | 57.792 | 34.783 | 0.00 | 0.00 | 38.83 | 2.83 |
699 | 700 | 4.321675 | GGAGTGGACACTTGTTTTGTTGTT | 60.322 | 41.667 | 6.40 | 0.00 | 42.66 | 2.83 |
700 | 701 | 3.192633 | GGAGTGGACACTTGTTTTGTTGT | 59.807 | 43.478 | 6.40 | 0.00 | 42.66 | 3.32 |
701 | 702 | 3.443681 | AGGAGTGGACACTTGTTTTGTTG | 59.556 | 43.478 | 6.40 | 0.00 | 42.66 | 3.33 |
702 | 703 | 3.694566 | GAGGAGTGGACACTTGTTTTGTT | 59.305 | 43.478 | 6.40 | 0.00 | 42.66 | 2.83 |
703 | 704 | 3.054361 | AGAGGAGTGGACACTTGTTTTGT | 60.054 | 43.478 | 6.40 | 0.00 | 42.66 | 2.83 |
704 | 705 | 3.313526 | CAGAGGAGTGGACACTTGTTTTG | 59.686 | 47.826 | 6.40 | 0.00 | 42.66 | 2.44 |
705 | 706 | 3.545703 | CAGAGGAGTGGACACTTGTTTT | 58.454 | 45.455 | 6.40 | 0.00 | 42.66 | 2.43 |
804 | 829 | 6.073003 | CGGGGCAATTAATGAGATAGTTCTTC | 60.073 | 42.308 | 0.00 | 0.00 | 30.30 | 2.87 |
856 | 884 | 8.912988 | TGCATTAAATTAAGATTAGAAGGGTGG | 58.087 | 33.333 | 0.00 | 0.00 | 0.00 | 4.61 |
936 | 964 | 3.695825 | GGAGTGGAGGGGAGGGGA | 61.696 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
939 | 972 | 0.688087 | GTACTGGAGTGGAGGGGAGG | 60.688 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
944 | 977 | 0.247736 | GTGCTGTACTGGAGTGGAGG | 59.752 | 60.000 | 1.65 | 0.00 | 0.00 | 4.30 |
969 | 1002 | 4.410400 | GAACTGGAGGTGGGGCGG | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1199 | 1244 | 3.154584 | AAACGAACTGTCCCGGCGA | 62.155 | 57.895 | 9.30 | 0.00 | 0.00 | 5.54 |
1395 | 1440 | 0.331954 | TGAAGTACTCTCCGCTCCCT | 59.668 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1404 | 1449 | 2.761208 | CCCGATCTTGGTGAAGTACTCT | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1944 | 1989 | 3.319198 | GGGGTGAAGGACGAGGCA | 61.319 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
2409 | 2454 | 1.666872 | GTCGAACACCACCCGGAAG | 60.667 | 63.158 | 0.73 | 0.00 | 35.59 | 3.46 |
2459 | 2504 | 3.648545 | ACTCCTCATATCTTAACAGCCCC | 59.351 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
2476 | 2521 | 3.734293 | GCTAATCAAGCGACGTTACTCCT | 60.734 | 47.826 | 0.00 | 0.00 | 42.53 | 3.69 |
2477 | 2522 | 2.534757 | GCTAATCAAGCGACGTTACTCC | 59.465 | 50.000 | 0.00 | 0.00 | 42.53 | 3.85 |
2503 | 2551 | 3.537580 | TGACTGACAAAGCCGTACTTTT | 58.462 | 40.909 | 0.00 | 0.00 | 46.73 | 2.27 |
2623 | 2680 | 1.734163 | AACAAACCGCCTTATCCTCG | 58.266 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2698 | 3130 | 7.737869 | TCACTGGTGTTTAGTAAAATGGAGTA | 58.262 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
2723 | 3167 | 2.200373 | AGGCCAGCACGTAAAAAGAT | 57.800 | 45.000 | 5.01 | 0.00 | 0.00 | 2.40 |
2893 | 3370 | 3.665190 | AGAGAACTTCCAAATGACGACC | 58.335 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
2909 | 3386 | 3.771216 | ACTCCTTGGTACCGTTAGAGAA | 58.229 | 45.455 | 21.28 | 3.79 | 0.00 | 2.87 |
2918 | 3395 | 4.021632 | ACGTCTCTTTTACTCCTTGGTACC | 60.022 | 45.833 | 4.43 | 4.43 | 0.00 | 3.34 |
2996 | 3749 | 4.452733 | GTGGCCTCTTCGGTCCCG | 62.453 | 72.222 | 3.32 | 0.00 | 36.18 | 5.14 |
3056 | 3813 | 0.467106 | TCCTCCGCTCCTCATCAGAG | 60.467 | 60.000 | 0.00 | 0.00 | 41.72 | 3.35 |
3087 | 3844 | 1.006086 | ACGGCAAAGCAAAGCAAAAC | 58.994 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3111 | 3873 | 4.371417 | CAGGCAGCCCCACCACAT | 62.371 | 66.667 | 8.22 | 0.00 | 35.39 | 3.21 |
3225 | 3995 | 2.809601 | CGGGTCGCAGCACAGTAC | 60.810 | 66.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3354 | 4133 | 1.269012 | CCTCCCATGTGCCATGTTTT | 58.731 | 50.000 | 12.36 | 0.00 | 0.00 | 2.43 |
3447 | 4232 | 0.168788 | CACTGTACGCATTTGCTGGG | 59.831 | 55.000 | 0.51 | 0.00 | 43.21 | 4.45 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.