Multiple sequence alignment - TraesCS3D01G215800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G215800 chr3D 100.000 2387 0 0 1 2387 291999989 291997603 0.000000e+00 4409.0
1 TraesCS3D01G215800 chr3D 91.385 650 34 11 1757 2387 291991117 291990471 0.000000e+00 870.0
2 TraesCS3D01G215800 chr3D 81.588 277 43 8 33 304 174799923 174799650 3.090000e-54 222.0
3 TraesCS3D01G215800 chr3D 85.417 192 22 6 311 501 292860645 292860459 6.730000e-46 195.0
4 TraesCS3D01G215800 chr3D 100.000 33 0 0 612 644 597160365 597160333 7.120000e-06 62.1
5 TraesCS3D01G215800 chr3B 93.761 1122 40 6 657 1757 385194385 385193273 0.000000e+00 1657.0
6 TraesCS3D01G215800 chr3B 85.932 263 35 2 32 292 89824822 89825084 1.810000e-71 279.0
7 TraesCS3D01G215800 chr3B 83.069 189 28 4 311 498 386193011 386193196 4.080000e-38 169.0
8 TraesCS3D01G215800 chr3A 94.588 850 30 4 772 1612 384737714 384736872 0.000000e+00 1301.0
9 TraesCS3D01G215800 chr3A 96.178 157 6 0 1601 1757 384735309 384735153 8.470000e-65 257.0
10 TraesCS3D01G215800 chr2D 89.985 659 35 13 1756 2385 69401973 69401317 0.000000e+00 822.0
11 TraesCS3D01G215800 chr2D 86.786 613 59 18 1765 2364 142382955 142382352 0.000000e+00 664.0
12 TraesCS3D01G215800 chr2D 82.723 191 29 3 311 500 490825707 490825894 1.470000e-37 167.0
13 TraesCS3D01G215800 chr6D 89.844 640 41 15 1757 2376 375282015 375282650 0.000000e+00 800.0
14 TraesCS3D01G215800 chr6D 91.364 579 39 6 1756 2327 375273483 375274057 0.000000e+00 782.0
15 TraesCS3D01G215800 chr6D 85.714 637 73 16 1757 2387 407922932 407923556 0.000000e+00 656.0
16 TraesCS3D01G215800 chr6D 85.547 256 34 2 46 298 16520449 16520704 5.060000e-67 265.0
17 TraesCS3D01G215800 chr6D 85.492 193 22 6 311 501 196164760 196164948 1.870000e-46 196.0
18 TraesCS3D01G215800 chr4D 89.369 602 46 10 1757 2343 88726797 88727395 0.000000e+00 741.0
19 TraesCS3D01G215800 chr4D 87.969 640 53 21 1757 2383 390583138 390583766 0.000000e+00 734.0
20 TraesCS3D01G215800 chr1D 92.886 492 34 1 1757 2248 74995543 74996033 0.000000e+00 713.0
21 TraesCS3D01G215800 chr1D 87.162 148 16 3 153 298 174296174 174296028 5.280000e-37 165.0
22 TraesCS3D01G215800 chr1D 84.049 163 23 3 153 313 62661312 62661151 1.140000e-33 154.0
23 TraesCS3D01G215800 chr2A 83.103 651 56 18 1757 2384 303506790 303506171 5.800000e-151 544.0
24 TraesCS3D01G215800 chr2A 85.930 199 11 7 2203 2384 303447284 303447086 1.870000e-46 196.0
25 TraesCS3D01G215800 chr2A 84.729 203 13 8 2203 2387 303472881 303472679 1.130000e-43 187.0
26 TraesCS3D01G215800 chr2A 80.976 205 16 12 2203 2384 303494512 303494308 8.900000e-30 141.0
27 TraesCS3D01G215800 chr2A 97.297 37 1 0 2347 2383 303451609 303451573 1.980000e-06 63.9
28 TraesCS3D01G215800 chr2A 97.297 37 1 0 2347 2383 303459932 303459896 1.980000e-06 63.9
29 TraesCS3D01G215800 chr5B 86.381 257 32 3 38 292 51568131 51568386 6.500000e-71 278.0
30 TraesCS3D01G215800 chr7B 86.561 253 31 3 42 292 185707536 185707787 2.340000e-70 276.0
31 TraesCS3D01G215800 chr7B 85.714 252 34 2 43 292 151403291 151403040 5.060000e-67 265.0
32 TraesCS3D01G215800 chr7B 84.328 268 38 3 29 292 634241612 634241879 2.350000e-65 259.0
33 TraesCS3D01G215800 chr7B 84.375 192 26 4 311 501 40176897 40177085 4.050000e-43 185.0
34 TraesCS3D01G215800 chr2B 85.441 261 36 2 34 292 345221397 345221657 1.090000e-68 270.0
35 TraesCS3D01G215800 chr2B 85.714 252 34 2 43 292 455432712 455432963 5.060000e-67 265.0
36 TraesCS3D01G215800 chr7D 85.000 260 36 2 40 296 219544199 219543940 6.540000e-66 261.0
37 TraesCS3D01G215800 chr5D 83.462 260 27 11 47 298 84219098 84218847 6.640000e-56 228.0
38 TraesCS3D01G215800 chr5D 81.905 210 32 6 311 519 308450346 308450550 3.150000e-39 172.0
39 TraesCS3D01G215800 chr5A 79.926 269 47 5 47 313 631358643 631358380 8.710000e-45 191.0
40 TraesCS3D01G215800 chr5A 100.000 32 0 0 614 645 69128836 69128805 2.560000e-05 60.2
41 TraesCS3D01G215800 chrUn 84.974 193 19 8 311 501 320483740 320483556 1.130000e-43 187.0
42 TraesCS3D01G215800 chrUn 84.974 193 19 8 311 501 438679612 438679796 1.130000e-43 187.0
43 TraesCS3D01G215800 chr6B 83.420 193 26 6 311 501 205433610 205433422 8.770000e-40 174.0
44 TraesCS3D01G215800 chr1B 86.486 148 17 3 153 298 497179771 497179917 2.460000e-35 159.0
45 TraesCS3D01G215800 chr1B 83.626 171 24 4 153 320 73907307 73907476 8.830000e-35 158.0
46 TraesCS3D01G215800 chr4B 78.601 243 48 4 47 286 560792922 560793163 8.830000e-35 158.0
47 TraesCS3D01G215800 chr7A 97.059 34 1 0 609 642 650594991 650595024 9.220000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G215800 chr3D 291997603 291999989 2386 True 4409 4409 100.000 1 2387 1 chr3D.!!$R3 2386
1 TraesCS3D01G215800 chr3D 291990471 291991117 646 True 870 870 91.385 1757 2387 1 chr3D.!!$R2 630
2 TraesCS3D01G215800 chr3B 385193273 385194385 1112 True 1657 1657 93.761 657 1757 1 chr3B.!!$R1 1100
3 TraesCS3D01G215800 chr3A 384735153 384737714 2561 True 779 1301 95.383 772 1757 2 chr3A.!!$R1 985
4 TraesCS3D01G215800 chr2D 69401317 69401973 656 True 822 822 89.985 1756 2385 1 chr2D.!!$R1 629
5 TraesCS3D01G215800 chr2D 142382352 142382955 603 True 664 664 86.786 1765 2364 1 chr2D.!!$R2 599
6 TraesCS3D01G215800 chr6D 375282015 375282650 635 False 800 800 89.844 1757 2376 1 chr6D.!!$F4 619
7 TraesCS3D01G215800 chr6D 375273483 375274057 574 False 782 782 91.364 1756 2327 1 chr6D.!!$F3 571
8 TraesCS3D01G215800 chr6D 407922932 407923556 624 False 656 656 85.714 1757 2387 1 chr6D.!!$F5 630
9 TraesCS3D01G215800 chr4D 88726797 88727395 598 False 741 741 89.369 1757 2343 1 chr4D.!!$F1 586
10 TraesCS3D01G215800 chr4D 390583138 390583766 628 False 734 734 87.969 1757 2383 1 chr4D.!!$F2 626
11 TraesCS3D01G215800 chr2A 303506171 303506790 619 True 544 544 83.103 1757 2384 1 chr2A.!!$R6 627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 468 0.037046 GGGGCAAAAATGCTGAGTGG 60.037 55.0 0.4 0.0 34.73 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 3778 4.582701 ATGCGAAGAACAATTTTCACCA 57.417 36.364 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.610705 TGAAAATGTTGAAAATCAGGAAAATGA 57.389 25.926 0.00 0.00 0.00 2.57
36 37 8.961294 AATGTTGAAAATCAGGAAAATGAACA 57.039 26.923 0.00 0.00 31.76 3.18
37 38 8.961294 ATGTTGAAAATCAGGAAAATGAACAA 57.039 26.923 0.00 0.00 31.76 2.83
38 39 8.783833 TGTTGAAAATCAGGAAAATGAACAAA 57.216 26.923 0.00 0.00 31.76 2.83
39 40 9.224267 TGTTGAAAATCAGGAAAATGAACAAAA 57.776 25.926 0.00 0.00 31.76 2.44
65 66 7.404671 AATATGGGATAATTATTTCCGTGGC 57.595 36.000 17.10 0.49 32.48 5.01
66 67 3.492337 TGGGATAATTATTTCCGTGGCC 58.508 45.455 0.00 0.00 32.48 5.36
67 68 2.823747 GGGATAATTATTTCCGTGGCCC 59.176 50.000 0.00 0.00 32.48 5.80
68 69 3.499745 GGGATAATTATTTCCGTGGCCCT 60.500 47.826 0.00 0.00 32.48 5.19
69 70 4.263594 GGGATAATTATTTCCGTGGCCCTA 60.264 45.833 0.00 0.00 32.48 3.53
70 71 4.941873 GGATAATTATTTCCGTGGCCCTAG 59.058 45.833 0.00 0.00 0.00 3.02
71 72 3.945640 AATTATTTCCGTGGCCCTAGT 57.054 42.857 0.00 0.00 0.00 2.57
72 73 6.296030 GGATAATTATTTCCGTGGCCCTAGTA 60.296 42.308 0.00 0.00 0.00 1.82
73 74 4.618920 ATTATTTCCGTGGCCCTAGTAG 57.381 45.455 0.00 0.00 0.00 2.57
74 75 1.875488 ATTTCCGTGGCCCTAGTAGT 58.125 50.000 0.00 0.00 0.00 2.73
75 76 0.899720 TTTCCGTGGCCCTAGTAGTG 59.100 55.000 0.00 0.00 0.00 2.74
76 77 0.251922 TTCCGTGGCCCTAGTAGTGT 60.252 55.000 0.00 0.00 0.00 3.55
77 78 0.682209 TCCGTGGCCCTAGTAGTGTC 60.682 60.000 0.00 0.00 0.00 3.67
78 79 1.673808 CCGTGGCCCTAGTAGTGTCC 61.674 65.000 0.00 0.00 0.00 4.02
79 80 1.673808 CGTGGCCCTAGTAGTGTCCC 61.674 65.000 0.00 0.00 0.00 4.46
80 81 0.616679 GTGGCCCTAGTAGTGTCCCA 60.617 60.000 0.00 0.00 0.00 4.37
81 82 0.616679 TGGCCCTAGTAGTGTCCCAC 60.617 60.000 0.00 0.00 34.10 4.61
83 84 1.112950 GCCCTAGTAGTGTCCCACTC 58.887 60.000 0.00 0.00 41.21 3.51
84 85 1.390565 CCCTAGTAGTGTCCCACTCG 58.609 60.000 0.00 0.00 41.21 4.18
85 86 1.390565 CCTAGTAGTGTCCCACTCGG 58.609 60.000 0.00 0.00 41.21 4.63
86 87 0.739561 CTAGTAGTGTCCCACTCGGC 59.260 60.000 0.00 0.00 41.21 5.54
87 88 0.330604 TAGTAGTGTCCCACTCGGCT 59.669 55.000 0.00 1.60 41.21 5.52
88 89 0.542232 AGTAGTGTCCCACTCGGCTT 60.542 55.000 0.00 0.00 41.21 4.35
89 90 0.320697 GTAGTGTCCCACTCGGCTTT 59.679 55.000 0.00 0.00 41.21 3.51
90 91 1.053424 TAGTGTCCCACTCGGCTTTT 58.947 50.000 0.00 0.00 41.21 2.27
91 92 0.182775 AGTGTCCCACTCGGCTTTTT 59.817 50.000 0.00 0.00 41.21 1.94
111 112 6.745159 TTTTTGCCCCTAGTTTTCAAAAAC 57.255 33.333 9.77 9.77 46.54 2.43
120 121 2.294074 GTTTTCAAAAACCCTTGGGCC 58.706 47.619 5.46 0.00 41.77 5.80
121 122 1.886422 TTTCAAAAACCCTTGGGCCT 58.114 45.000 4.53 0.00 0.00 5.19
122 123 1.127343 TTCAAAAACCCTTGGGCCTG 58.873 50.000 4.53 0.00 0.00 4.85
123 124 1.071299 CAAAAACCCTTGGGCCTGC 59.929 57.895 4.53 0.00 0.00 4.85
124 125 1.074547 AAAAACCCTTGGGCCTGCT 60.075 52.632 4.53 0.00 0.00 4.24
125 126 0.694105 AAAAACCCTTGGGCCTGCTT 60.694 50.000 4.53 0.00 0.00 3.91
126 127 0.189822 AAAACCCTTGGGCCTGCTTA 59.810 50.000 4.53 0.00 0.00 3.09
127 128 0.189822 AAACCCTTGGGCCTGCTTAA 59.810 50.000 4.53 0.00 0.00 1.85
128 129 0.251787 AACCCTTGGGCCTGCTTAAG 60.252 55.000 4.53 0.00 0.00 1.85
129 130 2.054453 CCCTTGGGCCTGCTTAAGC 61.054 63.158 20.84 20.84 42.50 3.09
136 137 2.184323 GCCTGCTTAAGCCACTTCC 58.816 57.895 24.30 3.76 41.18 3.46
137 138 1.315981 GCCTGCTTAAGCCACTTCCC 61.316 60.000 24.30 2.74 41.18 3.97
138 139 0.329596 CCTGCTTAAGCCACTTCCCT 59.670 55.000 24.30 0.00 41.18 4.20
139 140 1.680249 CCTGCTTAAGCCACTTCCCTC 60.680 57.143 24.30 0.00 41.18 4.30
140 141 0.328258 TGCTTAAGCCACTTCCCTCC 59.672 55.000 24.30 0.00 41.18 4.30
141 142 0.621082 GCTTAAGCCACTTCCCTCCT 59.379 55.000 17.00 0.00 34.31 3.69
142 143 1.407575 GCTTAAGCCACTTCCCTCCTC 60.408 57.143 17.00 0.00 34.31 3.71
143 144 2.192263 CTTAAGCCACTTCCCTCCTCT 58.808 52.381 0.00 0.00 0.00 3.69
144 145 2.344093 TAAGCCACTTCCCTCCTCTT 57.656 50.000 0.00 0.00 0.00 2.85
145 146 2.344093 AAGCCACTTCCCTCCTCTTA 57.656 50.000 0.00 0.00 0.00 2.10
146 147 2.577772 AGCCACTTCCCTCCTCTTAT 57.422 50.000 0.00 0.00 0.00 1.73
147 148 2.122768 AGCCACTTCCCTCCTCTTATG 58.877 52.381 0.00 0.00 0.00 1.90
148 149 1.475930 GCCACTTCCCTCCTCTTATGC 60.476 57.143 0.00 0.00 0.00 3.14
149 150 1.839994 CCACTTCCCTCCTCTTATGCA 59.160 52.381 0.00 0.00 0.00 3.96
150 151 2.441001 CCACTTCCCTCCTCTTATGCAT 59.559 50.000 3.79 3.79 0.00 3.96
151 152 3.117738 CCACTTCCCTCCTCTTATGCATT 60.118 47.826 3.54 0.00 0.00 3.56
152 153 4.530875 CACTTCCCTCCTCTTATGCATTT 58.469 43.478 3.54 0.00 0.00 2.32
153 154 4.337555 CACTTCCCTCCTCTTATGCATTTG 59.662 45.833 3.54 0.00 0.00 2.32
154 155 2.936202 TCCCTCCTCTTATGCATTTGC 58.064 47.619 3.54 0.00 42.50 3.68
155 156 1.959282 CCCTCCTCTTATGCATTTGCC 59.041 52.381 3.54 0.00 41.18 4.52
156 157 1.959282 CCTCCTCTTATGCATTTGCCC 59.041 52.381 3.54 0.00 41.18 5.36
157 158 2.423947 CCTCCTCTTATGCATTTGCCCT 60.424 50.000 3.54 0.00 41.18 5.19
158 159 3.294214 CTCCTCTTATGCATTTGCCCTT 58.706 45.455 3.54 0.00 41.18 3.95
159 160 3.703052 CTCCTCTTATGCATTTGCCCTTT 59.297 43.478 3.54 0.00 41.18 3.11
160 161 3.448301 TCCTCTTATGCATTTGCCCTTTG 59.552 43.478 3.54 0.00 41.18 2.77
161 162 3.448301 CCTCTTATGCATTTGCCCTTTGA 59.552 43.478 3.54 0.00 41.18 2.69
162 163 4.427312 CTCTTATGCATTTGCCCTTTGAC 58.573 43.478 3.54 0.00 41.18 3.18
163 164 4.088634 TCTTATGCATTTGCCCTTTGACT 58.911 39.130 3.54 0.00 41.18 3.41
164 165 2.754946 ATGCATTTGCCCTTTGACTG 57.245 45.000 0.00 0.00 41.18 3.51
165 166 1.412079 TGCATTTGCCCTTTGACTGT 58.588 45.000 0.00 0.00 41.18 3.55
166 167 1.761784 TGCATTTGCCCTTTGACTGTT 59.238 42.857 0.00 0.00 41.18 3.16
167 168 2.170187 TGCATTTGCCCTTTGACTGTTT 59.830 40.909 0.00 0.00 41.18 2.83
168 169 2.545106 GCATTTGCCCTTTGACTGTTTG 59.455 45.455 0.00 0.00 34.31 2.93
169 170 3.740764 GCATTTGCCCTTTGACTGTTTGA 60.741 43.478 0.00 0.00 34.31 2.69
170 171 3.518634 TTTGCCCTTTGACTGTTTGAC 57.481 42.857 0.00 0.00 0.00 3.18
171 172 1.398692 TGCCCTTTGACTGTTTGACC 58.601 50.000 0.00 0.00 0.00 4.02
172 173 0.673985 GCCCTTTGACTGTTTGACCC 59.326 55.000 0.00 0.00 0.00 4.46
173 174 1.754201 GCCCTTTGACTGTTTGACCCT 60.754 52.381 0.00 0.00 0.00 4.34
174 175 2.230660 CCCTTTGACTGTTTGACCCTC 58.769 52.381 0.00 0.00 0.00 4.30
175 176 2.422803 CCCTTTGACTGTTTGACCCTCA 60.423 50.000 0.00 0.00 0.00 3.86
176 177 2.618709 CCTTTGACTGTTTGACCCTCAC 59.381 50.000 0.00 0.00 0.00 3.51
177 178 3.545703 CTTTGACTGTTTGACCCTCACT 58.454 45.455 0.00 0.00 0.00 3.41
178 179 3.644966 TTGACTGTTTGACCCTCACTT 57.355 42.857 0.00 0.00 0.00 3.16
179 180 3.644966 TGACTGTTTGACCCTCACTTT 57.355 42.857 0.00 0.00 0.00 2.66
180 181 4.764050 TGACTGTTTGACCCTCACTTTA 57.236 40.909 0.00 0.00 0.00 1.85
181 182 5.105567 TGACTGTTTGACCCTCACTTTAA 57.894 39.130 0.00 0.00 0.00 1.52
182 183 5.502079 TGACTGTTTGACCCTCACTTTAAA 58.498 37.500 0.00 0.00 0.00 1.52
183 184 5.946972 TGACTGTTTGACCCTCACTTTAAAA 59.053 36.000 0.00 0.00 0.00 1.52
184 185 6.434652 TGACTGTTTGACCCTCACTTTAAAAA 59.565 34.615 0.00 0.00 0.00 1.94
185 186 6.627243 ACTGTTTGACCCTCACTTTAAAAAC 58.373 36.000 0.00 0.00 0.00 2.43
186 187 6.436218 ACTGTTTGACCCTCACTTTAAAAACT 59.564 34.615 0.00 0.00 0.00 2.66
187 188 7.039293 ACTGTTTGACCCTCACTTTAAAAACTT 60.039 33.333 0.00 0.00 0.00 2.66
188 189 7.317390 TGTTTGACCCTCACTTTAAAAACTTC 58.683 34.615 0.00 0.00 0.00 3.01
189 190 7.039644 TGTTTGACCCTCACTTTAAAAACTTCA 60.040 33.333 0.00 0.00 0.00 3.02
190 191 7.654022 TTGACCCTCACTTTAAAAACTTCAT 57.346 32.000 0.00 0.00 0.00 2.57
191 192 8.754991 TTGACCCTCACTTTAAAAACTTCATA 57.245 30.769 0.00 0.00 0.00 2.15
192 193 8.754991 TGACCCTCACTTTAAAAACTTCATAA 57.245 30.769 0.00 0.00 0.00 1.90
193 194 8.626526 TGACCCTCACTTTAAAAACTTCATAAC 58.373 33.333 0.00 0.00 0.00 1.89
194 195 8.528044 ACCCTCACTTTAAAAACTTCATAACA 57.472 30.769 0.00 0.00 0.00 2.41
195 196 8.973182 ACCCTCACTTTAAAAACTTCATAACAA 58.027 29.630 0.00 0.00 0.00 2.83
196 197 9.810545 CCCTCACTTTAAAAACTTCATAACAAA 57.189 29.630 0.00 0.00 0.00 2.83
252 253 7.951530 ATCAAAATGTTCAGAAAACATCACC 57.048 32.000 4.05 0.00 39.73 4.02
253 254 7.111247 TCAAAATGTTCAGAAAACATCACCT 57.889 32.000 4.05 0.00 39.73 4.00
254 255 8.231692 TCAAAATGTTCAGAAAACATCACCTA 57.768 30.769 4.05 0.00 39.73 3.08
255 256 8.859090 TCAAAATGTTCAGAAAACATCACCTAT 58.141 29.630 4.05 0.00 39.73 2.57
259 260 9.466497 AATGTTCAGAAAACATCACCTATATGT 57.534 29.630 4.05 0.00 39.73 2.29
260 261 8.267620 TGTTCAGAAAACATCACCTATATGTG 57.732 34.615 1.97 1.97 37.62 3.21
261 262 6.925610 TCAGAAAACATCACCTATATGTGC 57.074 37.500 3.46 0.00 37.62 4.57
262 263 6.413892 TCAGAAAACATCACCTATATGTGCA 58.586 36.000 3.46 0.00 37.62 4.57
263 264 7.056006 TCAGAAAACATCACCTATATGTGCAT 58.944 34.615 3.46 0.00 37.62 3.96
264 265 7.012610 TCAGAAAACATCACCTATATGTGCATG 59.987 37.037 3.46 9.83 37.62 4.06
265 266 5.443185 AAACATCACCTATATGTGCATGC 57.557 39.130 11.82 11.82 37.62 4.06
266 267 3.415212 ACATCACCTATATGTGCATGCC 58.585 45.455 16.68 7.25 36.24 4.40
267 268 2.566833 TCACCTATATGTGCATGCCC 57.433 50.000 16.68 3.59 36.17 5.36
268 269 2.057140 TCACCTATATGTGCATGCCCT 58.943 47.619 16.68 1.84 36.17 5.19
269 270 2.442878 TCACCTATATGTGCATGCCCTT 59.557 45.455 16.68 4.29 36.17 3.95
270 271 3.117550 TCACCTATATGTGCATGCCCTTT 60.118 43.478 16.68 0.00 36.17 3.11
271 272 3.638160 CACCTATATGTGCATGCCCTTTT 59.362 43.478 16.68 0.00 0.00 2.27
272 273 3.891366 ACCTATATGTGCATGCCCTTTTC 59.109 43.478 16.68 0.00 0.00 2.29
273 274 3.890756 CCTATATGTGCATGCCCTTTTCA 59.109 43.478 16.68 5.34 0.00 2.69
274 275 4.022589 CCTATATGTGCATGCCCTTTTCAG 60.023 45.833 16.68 4.34 0.00 3.02
275 276 1.636148 ATGTGCATGCCCTTTTCAGT 58.364 45.000 16.68 0.00 0.00 3.41
276 277 0.961019 TGTGCATGCCCTTTTCAGTC 59.039 50.000 16.68 0.00 0.00 3.51
277 278 0.961019 GTGCATGCCCTTTTCAGTCA 59.039 50.000 16.68 0.00 0.00 3.41
278 279 1.547372 GTGCATGCCCTTTTCAGTCAT 59.453 47.619 16.68 0.00 0.00 3.06
279 280 1.546923 TGCATGCCCTTTTCAGTCATG 59.453 47.619 16.68 0.00 37.98 3.07
280 281 1.820519 GCATGCCCTTTTCAGTCATGA 59.179 47.619 6.36 0.00 37.34 3.07
281 282 2.416431 GCATGCCCTTTTCAGTCATGAC 60.416 50.000 18.47 18.47 37.34 3.06
282 283 2.655090 TGCCCTTTTCAGTCATGACA 57.345 45.000 27.02 5.13 34.35 3.58
283 284 2.942804 TGCCCTTTTCAGTCATGACAA 58.057 42.857 27.02 11.35 34.35 3.18
284 285 3.295093 TGCCCTTTTCAGTCATGACAAA 58.705 40.909 27.02 16.51 34.35 2.83
285 286 3.703556 TGCCCTTTTCAGTCATGACAAAA 59.296 39.130 27.02 21.78 34.35 2.44
286 287 4.202141 TGCCCTTTTCAGTCATGACAAAAG 60.202 41.667 28.20 28.20 35.66 2.27
287 288 4.202151 GCCCTTTTCAGTCATGACAAAAGT 60.202 41.667 30.25 12.60 34.85 2.66
288 289 5.009610 GCCCTTTTCAGTCATGACAAAAGTA 59.990 40.000 30.25 17.09 34.85 2.24
289 290 6.294731 GCCCTTTTCAGTCATGACAAAAGTAT 60.295 38.462 30.25 11.46 34.85 2.12
290 291 7.661040 CCCTTTTCAGTCATGACAAAAGTATT 58.339 34.615 30.25 10.88 34.85 1.89
291 292 7.596248 CCCTTTTCAGTCATGACAAAAGTATTG 59.404 37.037 30.25 21.67 34.85 1.90
292 293 8.137437 CCTTTTCAGTCATGACAAAAGTATTGT 58.863 33.333 30.25 9.74 34.85 2.71
293 294 9.520204 CTTTTCAGTCATGACAAAAGTATTGTT 57.480 29.630 27.47 6.62 34.35 2.83
294 295 9.868277 TTTTCAGTCATGACAAAAGTATTGTTT 57.132 25.926 27.02 0.00 34.35 2.83
316 317 9.978044 TGTTTAAATGACATGATGTGATTTTGA 57.022 25.926 23.90 13.02 40.37 2.69
384 385 9.719355 AAAGTTTTTAAAGTGAGGTTCAAATGT 57.281 25.926 0.00 0.00 0.00 2.71
385 386 8.926715 AGTTTTTAAAGTGAGGTTCAAATGTC 57.073 30.769 0.00 0.00 0.00 3.06
386 387 8.527810 AGTTTTTAAAGTGAGGTTCAAATGTCA 58.472 29.630 0.00 0.00 0.00 3.58
387 388 9.145865 GTTTTTAAAGTGAGGTTCAAATGTCAA 57.854 29.630 0.00 0.00 0.00 3.18
388 389 9.712305 TTTTTAAAGTGAGGTTCAAATGTCAAA 57.288 25.926 0.00 0.00 0.00 2.69
389 390 8.925161 TTTAAAGTGAGGTTCAAATGTCAAAG 57.075 30.769 0.00 0.00 0.00 2.77
390 391 5.520376 AAGTGAGGTTCAAATGTCAAAGG 57.480 39.130 0.00 0.00 0.00 3.11
391 392 3.891366 AGTGAGGTTCAAATGTCAAAGGG 59.109 43.478 0.00 0.00 0.00 3.95
392 393 2.627699 TGAGGTTCAAATGTCAAAGGGC 59.372 45.455 0.00 0.00 0.00 5.19
393 394 2.627699 GAGGTTCAAATGTCAAAGGGCA 59.372 45.455 0.00 0.00 0.00 5.36
394 395 3.037549 AGGTTCAAATGTCAAAGGGCAA 58.962 40.909 0.00 0.00 0.00 4.52
395 396 3.454082 AGGTTCAAATGTCAAAGGGCAAA 59.546 39.130 0.00 0.00 0.00 3.68
396 397 4.102996 AGGTTCAAATGTCAAAGGGCAAAT 59.897 37.500 0.00 0.00 0.00 2.32
397 398 4.213906 GGTTCAAATGTCAAAGGGCAAATG 59.786 41.667 0.00 0.00 0.00 2.32
398 399 3.401182 TCAAATGTCAAAGGGCAAATGC 58.599 40.909 0.00 0.00 41.14 3.56
399 400 3.139850 CAAATGTCAAAGGGCAAATGCA 58.860 40.909 7.80 0.00 44.36 3.96
400 401 3.706600 AATGTCAAAGGGCAAATGCAT 57.293 38.095 7.80 0.00 44.36 3.96
401 402 4.822685 AATGTCAAAGGGCAAATGCATA 57.177 36.364 0.00 0.00 44.36 3.14
402 403 4.822685 ATGTCAAAGGGCAAATGCATAA 57.177 36.364 0.00 0.00 44.36 1.90
403 404 4.191033 TGTCAAAGGGCAAATGCATAAG 57.809 40.909 0.00 0.00 44.36 1.73
404 405 3.831333 TGTCAAAGGGCAAATGCATAAGA 59.169 39.130 0.00 0.00 44.36 2.10
405 406 4.082081 TGTCAAAGGGCAAATGCATAAGAG 60.082 41.667 0.00 0.00 44.36 2.85
406 407 3.448301 TCAAAGGGCAAATGCATAAGAGG 59.552 43.478 0.00 0.00 44.36 3.69
407 408 3.386932 AAGGGCAAATGCATAAGAGGA 57.613 42.857 0.00 0.00 44.36 3.71
408 409 2.941480 AGGGCAAATGCATAAGAGGAG 58.059 47.619 0.00 0.00 44.36 3.69
409 410 1.339291 GGGCAAATGCATAAGAGGAGC 59.661 52.381 0.00 0.00 44.36 4.70
410 411 1.002033 GGCAAATGCATAAGAGGAGCG 60.002 52.381 0.00 0.00 44.36 5.03
411 412 1.942657 GCAAATGCATAAGAGGAGCGA 59.057 47.619 0.00 0.00 41.59 4.93
412 413 2.355756 GCAAATGCATAAGAGGAGCGAA 59.644 45.455 0.00 0.00 41.59 4.70
413 414 3.547613 GCAAATGCATAAGAGGAGCGAAG 60.548 47.826 0.00 0.00 41.59 3.79
414 415 3.550437 AATGCATAAGAGGAGCGAAGT 57.450 42.857 0.00 0.00 0.00 3.01
415 416 2.299993 TGCATAAGAGGAGCGAAGTG 57.700 50.000 0.00 0.00 0.00 3.16
416 417 1.134699 TGCATAAGAGGAGCGAAGTGG 60.135 52.381 0.00 0.00 0.00 4.00
417 418 1.576356 CATAAGAGGAGCGAAGTGGC 58.424 55.000 0.00 0.00 0.00 5.01
419 420 1.267121 TAAGAGGAGCGAAGTGGCTT 58.733 50.000 0.00 0.00 44.93 4.35
420 421 1.267121 AAGAGGAGCGAAGTGGCTTA 58.733 50.000 0.00 0.00 44.93 3.09
421 422 1.490574 AGAGGAGCGAAGTGGCTTAT 58.509 50.000 0.00 0.00 44.93 1.73
422 423 1.137872 AGAGGAGCGAAGTGGCTTATG 59.862 52.381 0.00 0.00 44.93 1.90
423 424 0.462759 AGGAGCGAAGTGGCTTATGC 60.463 55.000 0.00 0.00 44.93 3.14
424 425 0.744414 GGAGCGAAGTGGCTTATGCA 60.744 55.000 2.72 0.00 44.93 3.96
425 426 0.654683 GAGCGAAGTGGCTTATGCAG 59.345 55.000 2.72 0.00 44.93 4.41
426 427 0.745845 AGCGAAGTGGCTTATGCAGG 60.746 55.000 2.72 0.00 41.39 4.85
427 428 0.744414 GCGAAGTGGCTTATGCAGGA 60.744 55.000 2.72 0.00 41.91 3.86
428 429 1.009829 CGAAGTGGCTTATGCAGGAC 58.990 55.000 2.72 0.00 41.91 3.85
429 430 1.383523 GAAGTGGCTTATGCAGGACC 58.616 55.000 2.72 0.00 41.91 4.46
430 431 0.392998 AAGTGGCTTATGCAGGACCG 60.393 55.000 2.72 0.00 41.91 4.79
431 432 1.220749 GTGGCTTATGCAGGACCGA 59.779 57.895 2.72 0.00 41.91 4.69
432 433 0.811616 GTGGCTTATGCAGGACCGAG 60.812 60.000 2.72 0.00 41.91 4.63
433 434 1.227674 GGCTTATGCAGGACCGAGG 60.228 63.158 2.72 0.00 41.91 4.63
434 435 1.227674 GCTTATGCAGGACCGAGGG 60.228 63.158 0.00 0.00 39.41 4.30
435 436 1.972660 GCTTATGCAGGACCGAGGGT 61.973 60.000 0.00 0.00 37.68 4.34
436 437 0.541863 CTTATGCAGGACCGAGGGTT 59.458 55.000 0.00 0.00 35.25 4.11
437 438 0.988832 TTATGCAGGACCGAGGGTTT 59.011 50.000 0.00 0.00 35.25 3.27
438 439 0.988832 TATGCAGGACCGAGGGTTTT 59.011 50.000 0.00 0.00 35.25 2.43
439 440 0.112412 ATGCAGGACCGAGGGTTTTT 59.888 50.000 0.00 0.00 35.25 1.94
440 441 0.821711 TGCAGGACCGAGGGTTTTTG 60.822 55.000 0.00 0.00 35.25 2.44
441 442 0.536460 GCAGGACCGAGGGTTTTTGA 60.536 55.000 0.00 0.00 35.25 2.69
442 443 1.975660 CAGGACCGAGGGTTTTTGAA 58.024 50.000 0.00 0.00 35.25 2.69
443 444 2.303175 CAGGACCGAGGGTTTTTGAAA 58.697 47.619 0.00 0.00 35.25 2.69
444 445 2.691011 CAGGACCGAGGGTTTTTGAAAA 59.309 45.455 0.00 0.00 35.25 2.29
445 446 2.691526 AGGACCGAGGGTTTTTGAAAAC 59.308 45.455 10.15 10.15 45.70 2.43
446 447 2.691526 GGACCGAGGGTTTTTGAAAACT 59.308 45.455 16.31 1.10 45.70 2.66
447 448 3.884693 GGACCGAGGGTTTTTGAAAACTA 59.115 43.478 16.31 0.00 45.70 2.24
448 449 4.023450 GGACCGAGGGTTTTTGAAAACTAG 60.023 45.833 16.31 0.00 45.70 2.57
449 450 3.887110 ACCGAGGGTTTTTGAAAACTAGG 59.113 43.478 16.31 15.33 45.70 3.02
450 451 3.254903 CCGAGGGTTTTTGAAAACTAGGG 59.745 47.826 16.31 10.32 45.70 3.53
451 452 3.254903 CGAGGGTTTTTGAAAACTAGGGG 59.745 47.826 16.31 2.89 45.70 4.79
452 453 2.969950 AGGGTTTTTGAAAACTAGGGGC 59.030 45.455 16.31 2.19 45.70 5.80
453 454 2.701423 GGGTTTTTGAAAACTAGGGGCA 59.299 45.455 16.31 0.00 45.70 5.36
454 455 3.134985 GGGTTTTTGAAAACTAGGGGCAA 59.865 43.478 16.31 0.00 45.70 4.52
455 456 4.384318 GGGTTTTTGAAAACTAGGGGCAAA 60.384 41.667 16.31 0.00 45.70 3.68
456 457 5.186942 GGTTTTTGAAAACTAGGGGCAAAA 58.813 37.500 16.31 9.50 45.70 2.44
457 458 5.648526 GGTTTTTGAAAACTAGGGGCAAAAA 59.351 36.000 16.31 16.67 45.70 1.94
458 459 6.320164 GGTTTTTGAAAACTAGGGGCAAAAAT 59.680 34.615 20.36 0.00 44.83 1.82
459 460 6.934048 TTTTGAAAACTAGGGGCAAAAATG 57.066 33.333 10.56 0.00 36.04 2.32
460 461 4.001618 TGAAAACTAGGGGCAAAAATGC 57.998 40.909 0.00 0.00 0.00 3.56
461 462 3.645687 TGAAAACTAGGGGCAAAAATGCT 59.354 39.130 0.40 0.00 34.73 3.79
462 463 3.683365 AAACTAGGGGCAAAAATGCTG 57.317 42.857 0.40 0.00 34.73 4.41
463 464 2.603075 ACTAGGGGCAAAAATGCTGA 57.397 45.000 0.40 0.00 34.73 4.26
464 465 2.450476 ACTAGGGGCAAAAATGCTGAG 58.550 47.619 0.40 0.00 34.73 3.35
465 466 2.225117 ACTAGGGGCAAAAATGCTGAGT 60.225 45.455 0.40 0.00 34.73 3.41
466 467 0.971386 AGGGGCAAAAATGCTGAGTG 59.029 50.000 0.40 0.00 34.73 3.51
467 468 0.037046 GGGGCAAAAATGCTGAGTGG 60.037 55.000 0.40 0.00 34.73 4.00
468 469 0.037046 GGGCAAAAATGCTGAGTGGG 60.037 55.000 0.40 0.00 34.73 4.61
469 470 0.968405 GGCAAAAATGCTGAGTGGGA 59.032 50.000 0.40 0.00 34.73 4.37
470 471 1.337167 GGCAAAAATGCTGAGTGGGAC 60.337 52.381 0.40 0.00 34.73 4.46
471 472 1.340889 GCAAAAATGCTGAGTGGGACA 59.659 47.619 0.00 0.00 0.00 4.02
504 505 9.747898 ATAGGGACATAAAATTAATTATCGGCA 57.252 29.630 0.01 0.00 0.00 5.69
505 506 8.472007 AGGGACATAAAATTAATTATCGGCAA 57.528 30.769 0.01 0.00 0.00 4.52
506 507 8.919145 AGGGACATAAAATTAATTATCGGCAAA 58.081 29.630 0.01 0.00 0.00 3.68
507 508 9.535878 GGGACATAAAATTAATTATCGGCAAAA 57.464 29.630 0.01 0.00 0.00 2.44
518 519 9.921637 TTAATTATCGGCAAAAAGAAAATCTGT 57.078 25.926 0.00 0.00 0.00 3.41
519 520 8.831715 AATTATCGGCAAAAAGAAAATCTGTT 57.168 26.923 0.00 0.00 0.00 3.16
520 521 7.636259 TTATCGGCAAAAAGAAAATCTGTTG 57.364 32.000 0.00 0.00 0.00 3.33
521 522 5.255710 TCGGCAAAAAGAAAATCTGTTGA 57.744 34.783 7.76 0.00 28.87 3.18
522 523 5.655488 TCGGCAAAAAGAAAATCTGTTGAA 58.345 33.333 7.76 0.00 28.87 2.69
523 524 6.102663 TCGGCAAAAAGAAAATCTGTTGAAA 58.897 32.000 7.76 0.00 28.87 2.69
524 525 6.035542 TCGGCAAAAAGAAAATCTGTTGAAAC 59.964 34.615 7.76 0.00 28.87 2.78
525 526 6.183360 CGGCAAAAAGAAAATCTGTTGAAACA 60.183 34.615 7.76 0.00 37.37 2.83
538 539 4.992688 TGTTGAAACAGGACATGAAACAC 58.007 39.130 0.00 0.00 34.30 3.32
539 540 4.460731 TGTTGAAACAGGACATGAAACACA 59.539 37.500 0.00 0.00 34.30 3.72
540 541 4.630894 TGAAACAGGACATGAAACACAC 57.369 40.909 0.00 0.00 0.00 3.82
541 542 4.269183 TGAAACAGGACATGAAACACACT 58.731 39.130 0.00 0.00 0.00 3.55
542 543 5.432645 TGAAACAGGACATGAAACACACTA 58.567 37.500 0.00 0.00 0.00 2.74
543 544 5.883115 TGAAACAGGACATGAAACACACTAA 59.117 36.000 0.00 0.00 0.00 2.24
544 545 5.751243 AACAGGACATGAAACACACTAAC 57.249 39.130 0.00 0.00 0.00 2.34
545 546 3.807622 ACAGGACATGAAACACACTAACG 59.192 43.478 0.00 0.00 0.00 3.18
546 547 2.806244 AGGACATGAAACACACTAACGC 59.194 45.455 0.00 0.00 0.00 4.84
547 548 2.806244 GGACATGAAACACACTAACGCT 59.194 45.455 0.00 0.00 0.00 5.07
548 549 3.991773 GGACATGAAACACACTAACGCTA 59.008 43.478 0.00 0.00 0.00 4.26
549 550 4.449743 GGACATGAAACACACTAACGCTAA 59.550 41.667 0.00 0.00 0.00 3.09
550 551 5.338614 ACATGAAACACACTAACGCTAAC 57.661 39.130 0.00 0.00 0.00 2.34
551 552 4.212636 ACATGAAACACACTAACGCTAACC 59.787 41.667 0.00 0.00 0.00 2.85
552 553 2.796031 TGAAACACACTAACGCTAACCG 59.204 45.455 0.00 0.00 44.21 4.44
553 554 2.798976 AACACACTAACGCTAACCGA 57.201 45.000 0.00 0.00 41.02 4.69
554 555 2.342910 ACACACTAACGCTAACCGAG 57.657 50.000 0.00 0.00 41.02 4.63
555 556 1.881973 ACACACTAACGCTAACCGAGA 59.118 47.619 0.00 0.00 41.02 4.04
556 557 2.294233 ACACACTAACGCTAACCGAGAA 59.706 45.455 0.00 0.00 41.02 2.87
557 558 3.243501 ACACACTAACGCTAACCGAGAAA 60.244 43.478 0.00 0.00 41.02 2.52
558 559 3.737266 CACACTAACGCTAACCGAGAAAA 59.263 43.478 0.00 0.00 41.02 2.29
559 560 3.737774 ACACTAACGCTAACCGAGAAAAC 59.262 43.478 0.00 0.00 41.02 2.43
560 561 3.122445 CACTAACGCTAACCGAGAAAACC 59.878 47.826 0.00 0.00 41.02 3.27
561 562 2.243602 AACGCTAACCGAGAAAACCA 57.756 45.000 0.00 0.00 41.02 3.67
562 563 1.792006 ACGCTAACCGAGAAAACCAG 58.208 50.000 0.00 0.00 41.02 4.00
563 564 0.442699 CGCTAACCGAGAAAACCAGC 59.557 55.000 0.00 0.00 40.02 4.85
564 565 1.519408 GCTAACCGAGAAAACCAGCA 58.481 50.000 0.00 0.00 0.00 4.41
565 566 1.464997 GCTAACCGAGAAAACCAGCAG 59.535 52.381 0.00 0.00 0.00 4.24
566 567 1.464997 CTAACCGAGAAAACCAGCAGC 59.535 52.381 0.00 0.00 0.00 5.25
567 568 0.465460 AACCGAGAAAACCAGCAGCA 60.465 50.000 0.00 0.00 0.00 4.41
568 569 0.465460 ACCGAGAAAACCAGCAGCAA 60.465 50.000 0.00 0.00 0.00 3.91
569 570 0.667993 CCGAGAAAACCAGCAGCAAA 59.332 50.000 0.00 0.00 0.00 3.68
570 571 1.600413 CCGAGAAAACCAGCAGCAAAC 60.600 52.381 0.00 0.00 0.00 2.93
571 572 1.334869 CGAGAAAACCAGCAGCAAACT 59.665 47.619 0.00 0.00 0.00 2.66
572 573 2.548057 CGAGAAAACCAGCAGCAAACTA 59.452 45.455 0.00 0.00 0.00 2.24
573 574 3.189287 CGAGAAAACCAGCAGCAAACTAT 59.811 43.478 0.00 0.00 0.00 2.12
574 575 4.479619 GAGAAAACCAGCAGCAAACTATG 58.520 43.478 0.00 0.00 0.00 2.23
575 576 4.144297 AGAAAACCAGCAGCAAACTATGA 58.856 39.130 0.00 0.00 0.00 2.15
576 577 4.217118 AGAAAACCAGCAGCAAACTATGAG 59.783 41.667 0.00 0.00 0.00 2.90
577 578 1.457346 ACCAGCAGCAAACTATGAGC 58.543 50.000 0.00 0.00 33.36 4.26
578 579 0.376152 CCAGCAGCAAACTATGAGCG 59.624 55.000 0.00 0.00 36.89 5.03
579 580 1.081892 CAGCAGCAAACTATGAGCGT 58.918 50.000 0.00 0.00 36.89 5.07
580 581 1.466167 CAGCAGCAAACTATGAGCGTT 59.534 47.619 0.00 0.00 36.89 4.84
581 582 2.672874 CAGCAGCAAACTATGAGCGTTA 59.327 45.455 0.00 0.00 36.89 3.18
582 583 3.125146 CAGCAGCAAACTATGAGCGTTAA 59.875 43.478 0.00 0.00 36.89 2.01
583 584 3.751175 AGCAGCAAACTATGAGCGTTAAA 59.249 39.130 0.00 0.00 36.89 1.52
584 585 4.091424 GCAGCAAACTATGAGCGTTAAAG 58.909 43.478 0.00 0.00 0.00 1.85
585 586 4.091424 CAGCAAACTATGAGCGTTAAAGC 58.909 43.478 5.12 5.12 37.41 3.51
595 596 0.098905 GCGTTAAAGCTAAGCTGGGC 59.901 55.000 6.10 3.31 39.62 5.36
596 597 1.739067 CGTTAAAGCTAAGCTGGGCT 58.261 50.000 7.73 7.73 39.62 5.19
597 598 1.398390 CGTTAAAGCTAAGCTGGGCTG 59.602 52.381 13.34 0.00 39.62 4.85
598 599 1.745653 GTTAAAGCTAAGCTGGGCTGG 59.254 52.381 13.34 0.00 39.62 4.85
599 600 0.255890 TAAAGCTAAGCTGGGCTGGG 59.744 55.000 13.34 0.00 39.62 4.45
600 601 3.651980 AAGCTAAGCTGGGCTGGGC 62.652 63.158 13.34 8.22 39.62 5.36
612 613 4.781959 CTGGGCCATTGCGTTGCG 62.782 66.667 6.72 0.00 38.85 4.85
614 615 4.356442 GGGCCATTGCGTTGCGTT 62.356 61.111 4.39 0.00 38.85 4.84
615 616 3.105157 GGCCATTGCGTTGCGTTG 61.105 61.111 0.00 0.00 38.85 4.10
616 617 3.105157 GCCATTGCGTTGCGTTGG 61.105 61.111 5.68 5.68 36.63 3.77
617 618 2.430582 CCATTGCGTTGCGTTGGG 60.431 61.111 2.80 0.00 32.11 4.12
618 619 3.105157 CATTGCGTTGCGTTGGGC 61.105 61.111 0.00 0.00 43.96 5.36
627 628 3.670377 GCGTTGGGCAAGTGGTCC 61.670 66.667 0.00 0.00 43.63 4.46
628 629 2.113139 CGTTGGGCAAGTGGTCCT 59.887 61.111 0.00 0.00 43.75 3.85
629 630 1.528309 CGTTGGGCAAGTGGTCCTT 60.528 57.895 0.00 0.00 43.75 3.36
630 631 1.106944 CGTTGGGCAAGTGGTCCTTT 61.107 55.000 0.00 0.00 43.75 3.11
631 632 1.119684 GTTGGGCAAGTGGTCCTTTT 58.880 50.000 0.00 0.00 43.75 2.27
632 633 1.118838 TTGGGCAAGTGGTCCTTTTG 58.881 50.000 0.00 0.00 43.75 2.44
633 634 0.758685 TGGGCAAGTGGTCCTTTTGG 60.759 55.000 0.00 0.00 43.75 3.28
665 666 1.912371 GCAAGTCTGGCCAGTTACGC 61.912 60.000 31.58 24.35 0.00 4.42
689 690 1.072391 TGGCGTGCGTGTTGTAATAG 58.928 50.000 0.00 0.00 0.00 1.73
696 697 4.481463 GTGCGTGTTGTAATAGCCATTTT 58.519 39.130 0.00 0.00 0.00 1.82
697 698 5.632959 GTGCGTGTTGTAATAGCCATTTTA 58.367 37.500 0.00 0.00 0.00 1.52
726 727 1.011968 CCCTGATTTTGCGTCGACGA 61.012 55.000 39.74 22.22 43.02 4.20
736 737 1.545614 GCGTCGACGAAACAAGAGCA 61.546 55.000 39.74 0.00 43.02 4.26
750 751 2.877168 CAAGAGCAGCAAGAAACAGAGT 59.123 45.455 0.00 0.00 0.00 3.24
767 768 1.610522 GAGTGTTGTTGCAGCCAGATT 59.389 47.619 0.00 0.00 0.00 2.40
777 778 1.830279 CAGCCAGATTTGCTTCCTCA 58.170 50.000 0.00 0.00 36.81 3.86
787 788 5.418209 AGATTTGCTTCCTCAATTCTTCCAG 59.582 40.000 0.00 0.00 34.75 3.86
924 937 1.057847 CGAAGCAAAACTCGCTCTACG 59.942 52.381 0.00 0.00 39.29 3.51
1450 1472 4.394729 TGAGGCCGACAAAAACTTTCTAT 58.605 39.130 0.00 0.00 0.00 1.98
1452 1474 5.642063 TGAGGCCGACAAAAACTTTCTATAG 59.358 40.000 0.00 0.00 0.00 1.31
1624 3220 6.155475 TGTTAATGCCTTGTTAGCTTTTGT 57.845 33.333 0.00 0.00 0.00 2.83
1671 3267 0.250770 GGACCCCAACAAGGAGTCAC 60.251 60.000 0.00 0.00 41.22 3.67
1719 3315 9.981114 TCTAAAGCATATGATCGAATTTACTGA 57.019 29.630 6.97 0.00 0.00 3.41
1757 3353 0.179181 ATGCAAACGCTTCGCTCATG 60.179 50.000 0.00 0.00 0.00 3.07
1758 3354 1.207593 GCAAACGCTTCGCTCATGT 59.792 52.632 0.00 0.00 0.00 3.21
1759 3355 1.061799 GCAAACGCTTCGCTCATGTG 61.062 55.000 0.00 0.00 0.00 3.21
1760 3356 0.512518 CAAACGCTTCGCTCATGTGA 59.487 50.000 0.00 0.00 0.00 3.58
1761 3357 0.512952 AAACGCTTCGCTCATGTGAC 59.487 50.000 0.00 0.00 31.77 3.67
1762 3358 0.599991 AACGCTTCGCTCATGTGACA 60.600 50.000 0.00 0.00 31.77 3.58
1763 3359 0.599991 ACGCTTCGCTCATGTGACAA 60.600 50.000 0.00 0.00 31.77 3.18
1764 3360 0.179240 CGCTTCGCTCATGTGACAAC 60.179 55.000 0.00 0.00 31.77 3.32
1765 3361 0.166814 GCTTCGCTCATGTGACAACC 59.833 55.000 0.00 0.00 31.77 3.77
1766 3362 0.798776 CTTCGCTCATGTGACAACCC 59.201 55.000 0.00 0.00 31.77 4.11
1767 3363 0.107643 TTCGCTCATGTGACAACCCA 59.892 50.000 0.00 0.00 31.77 4.51
1768 3364 0.107643 TCGCTCATGTGACAACCCAA 59.892 50.000 0.00 0.00 0.00 4.12
1898 3498 5.723295 AGTTGGGGATTTCATTCATTTTCG 58.277 37.500 0.00 0.00 0.00 3.46
1905 3505 7.763985 GGGGATTTCATTCATTTTCGTATTTGT 59.236 33.333 0.00 0.00 0.00 2.83
2237 3852 4.414999 ACGATTTTTCTTTAGGCGGAAC 57.585 40.909 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.610705 TCATTTTCCTGATTTTCAACATTTTCA 57.389 25.926 0.00 0.00 0.00 2.69
10 11 9.393512 TGTTCATTTTCCTGATTTTCAACATTT 57.606 25.926 0.00 0.00 0.00 2.32
13 14 8.783833 TTTGTTCATTTTCCTGATTTTCAACA 57.216 26.923 0.00 0.00 0.00 3.33
39 40 8.311109 GCCACGGAAATAATTATCCCATATTTT 58.689 33.333 13.89 0.00 31.31 1.82
40 41 7.093509 GGCCACGGAAATAATTATCCCATATTT 60.094 37.037 0.00 0.00 33.23 1.40
41 42 6.379988 GGCCACGGAAATAATTATCCCATATT 59.620 38.462 0.00 0.00 31.73 1.28
42 43 5.891551 GGCCACGGAAATAATTATCCCATAT 59.108 40.000 0.00 1.12 31.73 1.78
43 44 5.258051 GGCCACGGAAATAATTATCCCATA 58.742 41.667 0.00 0.00 31.73 2.74
44 45 4.086457 GGCCACGGAAATAATTATCCCAT 58.914 43.478 0.00 0.44 31.73 4.00
45 46 3.492337 GGCCACGGAAATAATTATCCCA 58.508 45.455 0.00 0.00 31.73 4.37
46 47 2.823747 GGGCCACGGAAATAATTATCCC 59.176 50.000 4.39 2.97 31.73 3.85
47 48 3.763057 AGGGCCACGGAAATAATTATCC 58.237 45.455 6.18 0.00 0.00 2.59
48 49 5.557866 ACTAGGGCCACGGAAATAATTATC 58.442 41.667 6.18 0.00 0.00 1.75
49 50 5.578157 ACTAGGGCCACGGAAATAATTAT 57.422 39.130 6.18 0.00 0.00 1.28
50 51 5.603813 ACTACTAGGGCCACGGAAATAATTA 59.396 40.000 6.18 0.00 0.00 1.40
51 52 3.945640 ACTAGGGCCACGGAAATAATT 57.054 42.857 6.18 0.00 0.00 1.40
52 53 3.971971 ACTACTAGGGCCACGGAAATAAT 59.028 43.478 6.18 0.00 0.00 1.28
53 54 3.133362 CACTACTAGGGCCACGGAAATAA 59.867 47.826 6.18 0.00 0.00 1.40
54 55 2.696707 CACTACTAGGGCCACGGAAATA 59.303 50.000 6.18 0.00 0.00 1.40
55 56 1.485066 CACTACTAGGGCCACGGAAAT 59.515 52.381 6.18 0.00 0.00 2.17
56 57 0.899720 CACTACTAGGGCCACGGAAA 59.100 55.000 6.18 0.00 0.00 3.13
57 58 0.251922 ACACTACTAGGGCCACGGAA 60.252 55.000 6.18 0.00 0.00 4.30
58 59 0.682209 GACACTACTAGGGCCACGGA 60.682 60.000 6.18 0.00 0.00 4.69
59 60 1.673808 GGACACTACTAGGGCCACGG 61.674 65.000 6.18 0.00 0.00 4.94
60 61 1.673808 GGGACACTACTAGGGCCACG 61.674 65.000 6.18 0.00 0.00 4.94
61 62 0.616679 TGGGACACTACTAGGGCCAC 60.617 60.000 6.18 0.00 0.00 5.01
62 63 1.785067 TGGGACACTACTAGGGCCA 59.215 57.895 6.18 0.00 0.00 5.36
63 64 4.800764 TGGGACACTACTAGGGCC 57.199 61.111 0.00 0.00 0.00 5.80
88 89 5.648526 GGTTTTTGAAAACTAGGGGCAAAAA 59.351 36.000 16.31 16.67 45.70 1.94
89 90 5.186942 GGTTTTTGAAAACTAGGGGCAAAA 58.813 37.500 16.31 9.50 45.70 2.44
90 91 4.384318 GGGTTTTTGAAAACTAGGGGCAAA 60.384 41.667 16.31 0.00 45.70 3.68
91 92 3.134985 GGGTTTTTGAAAACTAGGGGCAA 59.865 43.478 16.31 0.00 45.70 4.52
92 93 2.701423 GGGTTTTTGAAAACTAGGGGCA 59.299 45.455 16.31 0.00 45.70 5.36
93 94 2.969950 AGGGTTTTTGAAAACTAGGGGC 59.030 45.455 16.31 2.19 45.70 5.80
94 95 4.202315 CCAAGGGTTTTTGAAAACTAGGGG 60.202 45.833 16.31 10.80 45.70 4.79
95 96 4.202315 CCCAAGGGTTTTTGAAAACTAGGG 60.202 45.833 16.31 16.37 45.70 3.53
96 97 4.742440 GCCCAAGGGTTTTTGAAAACTAGG 60.742 45.833 16.31 12.80 45.70 3.02
97 98 4.377021 GCCCAAGGGTTTTTGAAAACTAG 58.623 43.478 16.31 0.00 45.70 2.57
98 99 3.134985 GGCCCAAGGGTTTTTGAAAACTA 59.865 43.478 16.31 0.00 45.70 2.24
99 100 2.092646 GGCCCAAGGGTTTTTGAAAACT 60.093 45.455 16.31 0.00 45.70 2.66
100 101 2.092646 AGGCCCAAGGGTTTTTGAAAAC 60.093 45.455 7.05 10.15 45.70 2.43
101 102 2.092699 CAGGCCCAAGGGTTTTTGAAAA 60.093 45.455 7.05 0.00 37.65 2.29
102 103 1.488393 CAGGCCCAAGGGTTTTTGAAA 59.512 47.619 7.05 0.00 37.65 2.69
103 104 1.127343 CAGGCCCAAGGGTTTTTGAA 58.873 50.000 7.05 0.00 37.65 2.69
104 105 1.406860 GCAGGCCCAAGGGTTTTTGA 61.407 55.000 7.05 0.00 37.65 2.69
105 106 1.071299 GCAGGCCCAAGGGTTTTTG 59.929 57.895 7.05 2.02 37.65 2.44
106 107 0.694105 AAGCAGGCCCAAGGGTTTTT 60.694 50.000 7.05 0.00 37.65 1.94
107 108 0.189822 TAAGCAGGCCCAAGGGTTTT 59.810 50.000 7.05 0.00 37.65 2.43
108 109 0.189822 TTAAGCAGGCCCAAGGGTTT 59.810 50.000 7.05 0.00 37.65 3.27
109 110 0.251787 CTTAAGCAGGCCCAAGGGTT 60.252 55.000 7.05 1.17 37.65 4.11
110 111 1.384191 CTTAAGCAGGCCCAAGGGT 59.616 57.895 7.05 0.00 37.65 4.34
111 112 2.054453 GCTTAAGCAGGCCCAAGGG 61.054 63.158 22.59 0.00 41.59 3.95
112 113 2.054453 GGCTTAAGCAGGCCCAAGG 61.054 63.158 27.83 0.00 42.55 3.61
113 114 3.608432 GGCTTAAGCAGGCCCAAG 58.392 61.111 27.83 0.00 42.55 3.61
119 120 0.329596 AGGGAAGTGGCTTAAGCAGG 59.670 55.000 27.83 0.00 44.36 4.85
120 121 1.680249 GGAGGGAAGTGGCTTAAGCAG 60.680 57.143 27.83 0.00 44.36 4.24
121 122 0.328258 GGAGGGAAGTGGCTTAAGCA 59.672 55.000 27.83 12.09 44.36 3.91
122 123 0.621082 AGGAGGGAAGTGGCTTAAGC 59.379 55.000 19.53 19.53 41.14 3.09
123 124 2.192263 AGAGGAGGGAAGTGGCTTAAG 58.808 52.381 0.00 0.00 0.00 1.85
124 125 2.344093 AGAGGAGGGAAGTGGCTTAA 57.656 50.000 0.00 0.00 0.00 1.85
125 126 2.344093 AAGAGGAGGGAAGTGGCTTA 57.656 50.000 0.00 0.00 0.00 3.09
126 127 2.344093 TAAGAGGAGGGAAGTGGCTT 57.656 50.000 0.00 0.00 0.00 4.35
127 128 2.122768 CATAAGAGGAGGGAAGTGGCT 58.877 52.381 0.00 0.00 0.00 4.75
128 129 1.475930 GCATAAGAGGAGGGAAGTGGC 60.476 57.143 0.00 0.00 0.00 5.01
129 130 1.839994 TGCATAAGAGGAGGGAAGTGG 59.160 52.381 0.00 0.00 0.00 4.00
130 131 3.853355 ATGCATAAGAGGAGGGAAGTG 57.147 47.619 0.00 0.00 0.00 3.16
131 132 4.530875 CAAATGCATAAGAGGAGGGAAGT 58.469 43.478 0.00 0.00 0.00 3.01
132 133 3.317430 GCAAATGCATAAGAGGAGGGAAG 59.683 47.826 0.00 0.00 41.59 3.46
133 134 3.290710 GCAAATGCATAAGAGGAGGGAA 58.709 45.455 0.00 0.00 41.59 3.97
134 135 2.423373 GGCAAATGCATAAGAGGAGGGA 60.423 50.000 0.00 0.00 44.36 4.20
135 136 1.959282 GGCAAATGCATAAGAGGAGGG 59.041 52.381 0.00 0.00 44.36 4.30
136 137 1.959282 GGGCAAATGCATAAGAGGAGG 59.041 52.381 0.00 0.00 44.36 4.30
137 138 2.941480 AGGGCAAATGCATAAGAGGAG 58.059 47.619 0.00 0.00 44.36 3.69
138 139 3.386932 AAGGGCAAATGCATAAGAGGA 57.613 42.857 0.00 0.00 44.36 3.71
139 140 3.448301 TCAAAGGGCAAATGCATAAGAGG 59.552 43.478 0.00 0.00 44.36 3.69
140 141 4.159135 AGTCAAAGGGCAAATGCATAAGAG 59.841 41.667 0.00 0.00 44.36 2.85
141 142 4.082081 CAGTCAAAGGGCAAATGCATAAGA 60.082 41.667 0.00 0.00 44.36 2.10
142 143 4.178540 CAGTCAAAGGGCAAATGCATAAG 58.821 43.478 0.00 0.00 44.36 1.73
143 144 3.577848 ACAGTCAAAGGGCAAATGCATAA 59.422 39.130 0.00 0.00 44.36 1.90
144 145 3.164268 ACAGTCAAAGGGCAAATGCATA 58.836 40.909 0.00 0.00 44.36 3.14
145 146 1.972795 ACAGTCAAAGGGCAAATGCAT 59.027 42.857 7.80 0.00 44.36 3.96
146 147 1.412079 ACAGTCAAAGGGCAAATGCA 58.588 45.000 7.80 0.00 44.36 3.96
147 148 2.531522 AACAGTCAAAGGGCAAATGC 57.468 45.000 0.00 0.00 41.14 3.56
148 149 3.803778 GTCAAACAGTCAAAGGGCAAATG 59.196 43.478 0.00 0.00 0.00 2.32
149 150 3.181466 GGTCAAACAGTCAAAGGGCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
150 151 2.167487 GGTCAAACAGTCAAAGGGCAAA 59.833 45.455 0.00 0.00 0.00 3.68
151 152 1.754226 GGTCAAACAGTCAAAGGGCAA 59.246 47.619 0.00 0.00 0.00 4.52
152 153 1.398692 GGTCAAACAGTCAAAGGGCA 58.601 50.000 0.00 0.00 0.00 5.36
153 154 0.673985 GGGTCAAACAGTCAAAGGGC 59.326 55.000 0.00 0.00 0.00 5.19
154 155 2.230660 GAGGGTCAAACAGTCAAAGGG 58.769 52.381 0.00 0.00 0.00 3.95
155 156 2.618709 GTGAGGGTCAAACAGTCAAAGG 59.381 50.000 0.00 0.00 0.00 3.11
156 157 3.545703 AGTGAGGGTCAAACAGTCAAAG 58.454 45.455 0.00 0.00 0.00 2.77
157 158 3.644966 AGTGAGGGTCAAACAGTCAAA 57.355 42.857 0.00 0.00 0.00 2.69
158 159 3.644966 AAGTGAGGGTCAAACAGTCAA 57.355 42.857 0.00 0.00 0.00 3.18
159 160 3.644966 AAAGTGAGGGTCAAACAGTCA 57.355 42.857 0.00 0.00 0.00 3.41
160 161 6.445357 TTTTAAAGTGAGGGTCAAACAGTC 57.555 37.500 0.00 0.00 0.00 3.51
161 162 6.436218 AGTTTTTAAAGTGAGGGTCAAACAGT 59.564 34.615 0.00 0.00 0.00 3.55
162 163 6.863275 AGTTTTTAAAGTGAGGGTCAAACAG 58.137 36.000 0.00 0.00 0.00 3.16
163 164 6.844097 AGTTTTTAAAGTGAGGGTCAAACA 57.156 33.333 0.00 0.00 0.00 2.83
164 165 7.317390 TGAAGTTTTTAAAGTGAGGGTCAAAC 58.683 34.615 0.00 0.00 0.00 2.93
165 166 7.469537 TGAAGTTTTTAAAGTGAGGGTCAAA 57.530 32.000 0.00 0.00 0.00 2.69
166 167 7.654022 ATGAAGTTTTTAAAGTGAGGGTCAA 57.346 32.000 0.00 0.00 0.00 3.18
167 168 8.626526 GTTATGAAGTTTTTAAAGTGAGGGTCA 58.373 33.333 0.00 0.00 0.00 4.02
168 169 8.626526 TGTTATGAAGTTTTTAAAGTGAGGGTC 58.373 33.333 0.00 0.00 0.00 4.46
169 170 8.528044 TGTTATGAAGTTTTTAAAGTGAGGGT 57.472 30.769 0.00 0.00 0.00 4.34
170 171 9.810545 TTTGTTATGAAGTTTTTAAAGTGAGGG 57.189 29.630 0.00 0.00 0.00 4.30
226 227 9.643693 GGTGATGTTTTCTGAACATTTTGATAT 57.356 29.630 5.93 0.00 40.62 1.63
227 228 8.859090 AGGTGATGTTTTCTGAACATTTTGATA 58.141 29.630 5.93 0.00 40.62 2.15
228 229 7.729116 AGGTGATGTTTTCTGAACATTTTGAT 58.271 30.769 5.93 0.00 40.62 2.57
229 230 7.111247 AGGTGATGTTTTCTGAACATTTTGA 57.889 32.000 5.93 0.00 40.62 2.69
233 234 9.466497 ACATATAGGTGATGTTTTCTGAACATT 57.534 29.630 5.93 0.00 40.62 2.71
234 235 8.896744 CACATATAGGTGATGTTTTCTGAACAT 58.103 33.333 12.10 4.22 42.98 2.71
235 236 7.148255 GCACATATAGGTGATGTTTTCTGAACA 60.148 37.037 21.10 0.00 41.32 3.18
236 237 7.148255 TGCACATATAGGTGATGTTTTCTGAAC 60.148 37.037 21.10 0.00 41.32 3.18
237 238 6.883756 TGCACATATAGGTGATGTTTTCTGAA 59.116 34.615 21.10 0.00 41.32 3.02
238 239 6.413892 TGCACATATAGGTGATGTTTTCTGA 58.586 36.000 21.10 0.00 41.32 3.27
239 240 6.682423 TGCACATATAGGTGATGTTTTCTG 57.318 37.500 21.10 0.00 41.32 3.02
240 241 6.238842 GCATGCACATATAGGTGATGTTTTCT 60.239 38.462 21.10 0.00 41.32 2.52
241 242 5.916883 GCATGCACATATAGGTGATGTTTTC 59.083 40.000 21.10 2.25 41.32 2.29
242 243 5.221303 GGCATGCACATATAGGTGATGTTTT 60.221 40.000 21.10 0.00 41.32 2.43
243 244 4.279169 GGCATGCACATATAGGTGATGTTT 59.721 41.667 21.10 0.00 41.32 2.83
244 245 3.822735 GGCATGCACATATAGGTGATGTT 59.177 43.478 21.10 0.00 41.32 2.71
245 246 3.415212 GGCATGCACATATAGGTGATGT 58.585 45.455 21.10 3.11 41.32 3.06
246 247 2.751259 GGGCATGCACATATAGGTGATG 59.249 50.000 21.10 19.09 41.32 3.07
247 248 2.646297 AGGGCATGCACATATAGGTGAT 59.354 45.455 24.51 8.79 41.32 3.06
248 249 2.057140 AGGGCATGCACATATAGGTGA 58.943 47.619 24.51 6.89 41.32 4.02
249 250 2.574006 AGGGCATGCACATATAGGTG 57.426 50.000 24.51 13.10 41.72 4.00
250 251 3.600448 AAAGGGCATGCACATATAGGT 57.400 42.857 24.51 0.00 0.00 3.08
251 252 3.890756 TGAAAAGGGCATGCACATATAGG 59.109 43.478 24.51 0.00 0.00 2.57
252 253 4.581824 ACTGAAAAGGGCATGCACATATAG 59.418 41.667 24.51 15.21 0.00 1.31
253 254 4.535781 ACTGAAAAGGGCATGCACATATA 58.464 39.130 24.51 3.15 0.00 0.86
254 255 3.368248 ACTGAAAAGGGCATGCACATAT 58.632 40.909 24.51 6.93 0.00 1.78
255 256 2.754552 GACTGAAAAGGGCATGCACATA 59.245 45.455 24.51 1.99 0.00 2.29
256 257 1.547372 GACTGAAAAGGGCATGCACAT 59.453 47.619 24.51 7.48 0.00 3.21
257 258 0.961019 GACTGAAAAGGGCATGCACA 59.039 50.000 24.51 9.36 0.00 4.57
258 259 0.961019 TGACTGAAAAGGGCATGCAC 59.039 50.000 21.36 17.78 0.00 4.57
259 260 1.546923 CATGACTGAAAAGGGCATGCA 59.453 47.619 21.36 0.00 31.24 3.96
260 261 1.820519 TCATGACTGAAAAGGGCATGC 59.179 47.619 9.90 9.90 37.01 4.06
261 262 2.821378 TGTCATGACTGAAAAGGGCATG 59.179 45.455 25.55 3.41 38.09 4.06
262 263 3.159213 TGTCATGACTGAAAAGGGCAT 57.841 42.857 25.55 0.00 31.85 4.40
263 264 2.655090 TGTCATGACTGAAAAGGGCA 57.345 45.000 25.55 0.00 31.85 5.36
264 265 4.202151 ACTTTTGTCATGACTGAAAAGGGC 60.202 41.667 33.00 9.85 38.01 5.19
265 266 5.520376 ACTTTTGTCATGACTGAAAAGGG 57.480 39.130 33.00 21.46 38.01 3.95
266 267 8.137437 ACAATACTTTTGTCATGACTGAAAAGG 58.863 33.333 33.00 24.67 38.01 3.11
267 268 9.520204 AACAATACTTTTGTCATGACTGAAAAG 57.480 29.630 30.77 30.77 38.85 2.27
268 269 9.868277 AAACAATACTTTTGTCATGACTGAAAA 57.132 25.926 25.55 21.20 31.85 2.29
290 291 9.978044 TCAAAATCACATCATGTCATTTAAACA 57.022 25.926 0.00 0.00 0.00 2.83
358 359 9.719355 ACATTTGAACCTCACTTTAAAAACTTT 57.281 25.926 0.00 0.00 0.00 2.66
359 360 9.366216 GACATTTGAACCTCACTTTAAAAACTT 57.634 29.630 0.00 0.00 0.00 2.66
360 361 8.527810 TGACATTTGAACCTCACTTTAAAAACT 58.472 29.630 0.00 0.00 0.00 2.66
361 362 8.696410 TGACATTTGAACCTCACTTTAAAAAC 57.304 30.769 0.00 0.00 0.00 2.43
362 363 9.712305 TTTGACATTTGAACCTCACTTTAAAAA 57.288 25.926 0.00 0.00 0.00 1.94
363 364 9.364989 CTTTGACATTTGAACCTCACTTTAAAA 57.635 29.630 0.00 0.00 0.00 1.52
364 365 7.978975 CCTTTGACATTTGAACCTCACTTTAAA 59.021 33.333 0.00 0.00 0.00 1.52
365 366 7.417342 CCCTTTGACATTTGAACCTCACTTTAA 60.417 37.037 0.00 0.00 0.00 1.52
366 367 6.040391 CCCTTTGACATTTGAACCTCACTTTA 59.960 38.462 0.00 0.00 0.00 1.85
367 368 5.163416 CCCTTTGACATTTGAACCTCACTTT 60.163 40.000 0.00 0.00 0.00 2.66
368 369 4.342092 CCCTTTGACATTTGAACCTCACTT 59.658 41.667 0.00 0.00 0.00 3.16
369 370 3.891366 CCCTTTGACATTTGAACCTCACT 59.109 43.478 0.00 0.00 0.00 3.41
370 371 3.552890 GCCCTTTGACATTTGAACCTCAC 60.553 47.826 0.00 0.00 0.00 3.51
371 372 2.627699 GCCCTTTGACATTTGAACCTCA 59.372 45.455 0.00 0.00 0.00 3.86
372 373 2.627699 TGCCCTTTGACATTTGAACCTC 59.372 45.455 0.00 0.00 0.00 3.85
373 374 2.676748 TGCCCTTTGACATTTGAACCT 58.323 42.857 0.00 0.00 0.00 3.50
374 375 3.467374 TTGCCCTTTGACATTTGAACC 57.533 42.857 0.00 0.00 0.00 3.62
375 376 4.319694 GCATTTGCCCTTTGACATTTGAAC 60.320 41.667 0.00 0.00 34.31 3.18
376 377 3.814283 GCATTTGCCCTTTGACATTTGAA 59.186 39.130 0.00 0.00 34.31 2.69
377 378 3.181457 TGCATTTGCCCTTTGACATTTGA 60.181 39.130 0.00 0.00 41.18 2.69
378 379 3.139850 TGCATTTGCCCTTTGACATTTG 58.860 40.909 0.00 0.00 41.18 2.32
379 380 3.488778 TGCATTTGCCCTTTGACATTT 57.511 38.095 0.00 0.00 41.18 2.32
380 381 3.706600 ATGCATTTGCCCTTTGACATT 57.293 38.095 0.00 0.00 41.18 2.71
381 382 4.467082 TCTTATGCATTTGCCCTTTGACAT 59.533 37.500 3.54 0.00 41.18 3.06
382 383 3.831333 TCTTATGCATTTGCCCTTTGACA 59.169 39.130 3.54 0.00 41.18 3.58
383 384 4.427312 CTCTTATGCATTTGCCCTTTGAC 58.573 43.478 3.54 0.00 41.18 3.18
384 385 3.448301 CCTCTTATGCATTTGCCCTTTGA 59.552 43.478 3.54 0.00 41.18 2.69
385 386 3.448301 TCCTCTTATGCATTTGCCCTTTG 59.552 43.478 3.54 0.00 41.18 2.77
386 387 3.703052 CTCCTCTTATGCATTTGCCCTTT 59.297 43.478 3.54 0.00 41.18 3.11
387 388 3.294214 CTCCTCTTATGCATTTGCCCTT 58.706 45.455 3.54 0.00 41.18 3.95
388 389 2.941480 CTCCTCTTATGCATTTGCCCT 58.059 47.619 3.54 0.00 41.18 5.19
389 390 1.339291 GCTCCTCTTATGCATTTGCCC 59.661 52.381 3.54 0.00 41.18 5.36
390 391 1.002033 CGCTCCTCTTATGCATTTGCC 60.002 52.381 3.54 0.00 41.18 4.52
391 392 1.942657 TCGCTCCTCTTATGCATTTGC 59.057 47.619 3.54 0.00 42.50 3.68
392 393 3.624861 ACTTCGCTCCTCTTATGCATTTG 59.375 43.478 3.54 0.00 0.00 2.32
393 394 3.624861 CACTTCGCTCCTCTTATGCATTT 59.375 43.478 3.54 0.00 0.00 2.32
394 395 3.201290 CACTTCGCTCCTCTTATGCATT 58.799 45.455 3.54 0.00 0.00 3.56
395 396 2.484417 CCACTTCGCTCCTCTTATGCAT 60.484 50.000 3.79 3.79 0.00 3.96
396 397 1.134699 CCACTTCGCTCCTCTTATGCA 60.135 52.381 0.00 0.00 0.00 3.96
397 398 1.576356 CCACTTCGCTCCTCTTATGC 58.424 55.000 0.00 0.00 0.00 3.14
398 399 1.137872 AGCCACTTCGCTCCTCTTATG 59.862 52.381 0.00 0.00 32.06 1.90
399 400 1.490574 AGCCACTTCGCTCCTCTTAT 58.509 50.000 0.00 0.00 32.06 1.73
400 401 1.267121 AAGCCACTTCGCTCCTCTTA 58.733 50.000 0.00 0.00 38.44 2.10
401 402 1.267121 TAAGCCACTTCGCTCCTCTT 58.733 50.000 0.00 0.00 38.44 2.85
402 403 1.137872 CATAAGCCACTTCGCTCCTCT 59.862 52.381 0.00 0.00 38.44 3.69
403 404 1.576356 CATAAGCCACTTCGCTCCTC 58.424 55.000 0.00 0.00 38.44 3.71
404 405 0.462759 GCATAAGCCACTTCGCTCCT 60.463 55.000 0.00 0.00 38.44 3.69
405 406 0.744414 TGCATAAGCCACTTCGCTCC 60.744 55.000 0.00 0.00 38.44 4.70
406 407 0.654683 CTGCATAAGCCACTTCGCTC 59.345 55.000 0.00 0.00 38.44 5.03
407 408 0.745845 CCTGCATAAGCCACTTCGCT 60.746 55.000 0.00 0.00 42.22 4.93
408 409 0.744414 TCCTGCATAAGCCACTTCGC 60.744 55.000 0.00 0.00 41.13 4.70
409 410 1.009829 GTCCTGCATAAGCCACTTCG 58.990 55.000 0.00 0.00 41.13 3.79
410 411 1.383523 GGTCCTGCATAAGCCACTTC 58.616 55.000 0.00 0.00 41.13 3.01
411 412 0.392998 CGGTCCTGCATAAGCCACTT 60.393 55.000 0.00 0.00 41.13 3.16
412 413 1.221840 CGGTCCTGCATAAGCCACT 59.778 57.895 0.00 0.00 41.13 4.00
413 414 0.811616 CTCGGTCCTGCATAAGCCAC 60.812 60.000 0.00 0.00 41.13 5.01
414 415 1.522092 CTCGGTCCTGCATAAGCCA 59.478 57.895 0.00 0.00 41.13 4.75
415 416 1.227674 CCTCGGTCCTGCATAAGCC 60.228 63.158 0.00 0.00 41.13 4.35
416 417 1.227674 CCCTCGGTCCTGCATAAGC 60.228 63.158 0.00 0.00 42.57 3.09
417 418 0.541863 AACCCTCGGTCCTGCATAAG 59.458 55.000 0.00 0.00 33.12 1.73
418 419 0.988832 AAACCCTCGGTCCTGCATAA 59.011 50.000 0.00 0.00 33.12 1.90
419 420 0.988832 AAAACCCTCGGTCCTGCATA 59.011 50.000 0.00 0.00 33.12 3.14
420 421 0.112412 AAAAACCCTCGGTCCTGCAT 59.888 50.000 0.00 0.00 33.12 3.96
421 422 0.821711 CAAAAACCCTCGGTCCTGCA 60.822 55.000 0.00 0.00 33.12 4.41
422 423 0.536460 TCAAAAACCCTCGGTCCTGC 60.536 55.000 0.00 0.00 33.12 4.85
423 424 1.975660 TTCAAAAACCCTCGGTCCTG 58.024 50.000 0.00 0.00 33.12 3.86
424 425 2.691526 GTTTTCAAAAACCCTCGGTCCT 59.308 45.455 7.03 0.00 41.77 3.85
425 426 3.088194 GTTTTCAAAAACCCTCGGTCC 57.912 47.619 7.03 0.00 41.77 4.46
434 435 6.745159 TTTTTGCCCCTAGTTTTCAAAAAC 57.255 33.333 9.77 9.77 46.54 2.43
435 436 6.183360 GCATTTTTGCCCCTAGTTTTCAAAAA 60.183 34.615 16.89 16.89 44.98 1.94
436 437 5.298026 GCATTTTTGCCCCTAGTTTTCAAAA 59.702 36.000 0.00 0.00 35.59 2.44
437 438 4.819088 GCATTTTTGCCCCTAGTTTTCAAA 59.181 37.500 0.00 0.00 0.00 2.69
438 439 4.102367 AGCATTTTTGCCCCTAGTTTTCAA 59.898 37.500 0.00 0.00 34.90 2.69
439 440 3.645687 AGCATTTTTGCCCCTAGTTTTCA 59.354 39.130 0.00 0.00 34.90 2.69
440 441 3.996363 CAGCATTTTTGCCCCTAGTTTTC 59.004 43.478 0.00 0.00 34.90 2.29
441 442 3.645687 TCAGCATTTTTGCCCCTAGTTTT 59.354 39.130 0.00 0.00 34.90 2.43
442 443 3.238597 TCAGCATTTTTGCCCCTAGTTT 58.761 40.909 0.00 0.00 34.90 2.66
443 444 2.827921 CTCAGCATTTTTGCCCCTAGTT 59.172 45.455 0.00 0.00 34.90 2.24
444 445 2.225117 ACTCAGCATTTTTGCCCCTAGT 60.225 45.455 0.00 0.00 34.90 2.57
445 446 2.165030 CACTCAGCATTTTTGCCCCTAG 59.835 50.000 0.00 0.00 34.90 3.02
446 447 2.170166 CACTCAGCATTTTTGCCCCTA 58.830 47.619 0.00 0.00 34.90 3.53
447 448 0.971386 CACTCAGCATTTTTGCCCCT 59.029 50.000 0.00 0.00 34.90 4.79
448 449 0.037046 CCACTCAGCATTTTTGCCCC 60.037 55.000 0.00 0.00 34.90 5.80
449 450 0.037046 CCCACTCAGCATTTTTGCCC 60.037 55.000 0.00 0.00 34.90 5.36
450 451 0.968405 TCCCACTCAGCATTTTTGCC 59.032 50.000 0.00 0.00 34.90 4.52
451 452 1.340889 TGTCCCACTCAGCATTTTTGC 59.659 47.619 0.00 0.00 0.00 3.68
452 453 2.288395 GGTGTCCCACTCAGCATTTTTG 60.288 50.000 0.00 0.00 34.40 2.44
453 454 1.963515 GGTGTCCCACTCAGCATTTTT 59.036 47.619 0.00 0.00 34.40 1.94
454 455 1.145738 AGGTGTCCCACTCAGCATTTT 59.854 47.619 0.00 0.00 36.02 1.82
455 456 0.773644 AGGTGTCCCACTCAGCATTT 59.226 50.000 0.00 0.00 36.02 2.32
456 457 1.279271 GTAGGTGTCCCACTCAGCATT 59.721 52.381 0.00 0.00 36.02 3.56
457 458 0.905357 GTAGGTGTCCCACTCAGCAT 59.095 55.000 0.00 0.00 36.02 3.79
458 459 0.178932 AGTAGGTGTCCCACTCAGCA 60.179 55.000 0.00 0.00 36.02 4.41
459 460 1.848652 TAGTAGGTGTCCCACTCAGC 58.151 55.000 0.00 0.00 34.40 4.26
460 461 4.145807 CCTATAGTAGGTGTCCCACTCAG 58.854 52.174 0.00 0.00 41.18 3.35
461 462 3.117246 CCCTATAGTAGGTGTCCCACTCA 60.117 52.174 0.00 0.00 44.73 3.41
462 463 3.139770 TCCCTATAGTAGGTGTCCCACTC 59.860 52.174 0.00 0.00 44.73 3.51
463 464 3.117208 GTCCCTATAGTAGGTGTCCCACT 60.117 52.174 0.00 0.00 44.73 4.00
464 465 3.229293 GTCCCTATAGTAGGTGTCCCAC 58.771 54.545 0.00 0.00 44.73 4.61
465 466 2.860679 TGTCCCTATAGTAGGTGTCCCA 59.139 50.000 0.00 0.00 44.73 4.37
466 467 3.607490 TGTCCCTATAGTAGGTGTCCC 57.393 52.381 0.00 0.00 44.73 4.46
467 468 7.607615 TTTTATGTCCCTATAGTAGGTGTCC 57.392 40.000 0.00 0.00 44.73 4.02
478 479 9.747898 TGCCGATAATTAATTTTATGTCCCTAT 57.252 29.630 5.91 0.00 0.00 2.57
479 480 9.575868 TTGCCGATAATTAATTTTATGTCCCTA 57.424 29.630 5.91 0.00 0.00 3.53
480 481 8.472007 TTGCCGATAATTAATTTTATGTCCCT 57.528 30.769 5.91 0.00 0.00 4.20
481 482 9.535878 TTTTGCCGATAATTAATTTTATGTCCC 57.464 29.630 5.91 0.00 0.00 4.46
492 493 9.921637 ACAGATTTTCTTTTTGCCGATAATTAA 57.078 25.926 0.00 0.00 0.00 1.40
493 494 9.921637 AACAGATTTTCTTTTTGCCGATAATTA 57.078 25.926 0.00 0.00 0.00 1.40
494 495 8.711457 CAACAGATTTTCTTTTTGCCGATAATT 58.289 29.630 0.00 0.00 0.00 1.40
495 496 8.087750 TCAACAGATTTTCTTTTTGCCGATAAT 58.912 29.630 0.00 0.00 0.00 1.28
496 497 7.429633 TCAACAGATTTTCTTTTTGCCGATAA 58.570 30.769 0.00 0.00 0.00 1.75
497 498 6.976088 TCAACAGATTTTCTTTTTGCCGATA 58.024 32.000 0.00 0.00 0.00 2.92
498 499 5.841810 TCAACAGATTTTCTTTTTGCCGAT 58.158 33.333 0.00 0.00 0.00 4.18
499 500 5.255710 TCAACAGATTTTCTTTTTGCCGA 57.744 34.783 0.00 0.00 0.00 5.54
500 501 5.964887 TTCAACAGATTTTCTTTTTGCCG 57.035 34.783 0.00 0.00 0.00 5.69
501 502 7.071014 TGTTTCAACAGATTTTCTTTTTGCC 57.929 32.000 0.00 0.00 34.30 4.52
516 517 4.460731 TGTGTTTCATGTCCTGTTTCAACA 59.539 37.500 0.00 0.00 37.37 3.33
517 518 4.798387 GTGTGTTTCATGTCCTGTTTCAAC 59.202 41.667 0.00 0.00 0.00 3.18
518 519 4.704540 AGTGTGTTTCATGTCCTGTTTCAA 59.295 37.500 0.00 0.00 0.00 2.69
519 520 4.269183 AGTGTGTTTCATGTCCTGTTTCA 58.731 39.130 0.00 0.00 0.00 2.69
520 521 4.900635 AGTGTGTTTCATGTCCTGTTTC 57.099 40.909 0.00 0.00 0.00 2.78
521 522 5.220777 CGTTAGTGTGTTTCATGTCCTGTTT 60.221 40.000 0.00 0.00 0.00 2.83
522 523 4.272504 CGTTAGTGTGTTTCATGTCCTGTT 59.727 41.667 0.00 0.00 0.00 3.16
523 524 3.807622 CGTTAGTGTGTTTCATGTCCTGT 59.192 43.478 0.00 0.00 0.00 4.00
524 525 3.363970 GCGTTAGTGTGTTTCATGTCCTG 60.364 47.826 0.00 0.00 0.00 3.86
525 526 2.806244 GCGTTAGTGTGTTTCATGTCCT 59.194 45.455 0.00 0.00 0.00 3.85
526 527 2.806244 AGCGTTAGTGTGTTTCATGTCC 59.194 45.455 0.00 0.00 0.00 4.02
527 528 5.371629 GTTAGCGTTAGTGTGTTTCATGTC 58.628 41.667 0.00 0.00 0.00 3.06
528 529 4.212636 GGTTAGCGTTAGTGTGTTTCATGT 59.787 41.667 0.00 0.00 0.00 3.21
529 530 4.665645 CGGTTAGCGTTAGTGTGTTTCATG 60.666 45.833 0.00 0.00 0.00 3.07
530 531 3.430895 CGGTTAGCGTTAGTGTGTTTCAT 59.569 43.478 0.00 0.00 0.00 2.57
531 532 2.796031 CGGTTAGCGTTAGTGTGTTTCA 59.204 45.455 0.00 0.00 0.00 2.69
532 533 3.052036 TCGGTTAGCGTTAGTGTGTTTC 58.948 45.455 3.21 0.00 0.00 2.78
533 534 3.054878 CTCGGTTAGCGTTAGTGTGTTT 58.945 45.455 3.21 0.00 0.00 2.83
534 535 2.294233 TCTCGGTTAGCGTTAGTGTGTT 59.706 45.455 3.21 0.00 0.00 3.32
535 536 1.881973 TCTCGGTTAGCGTTAGTGTGT 59.118 47.619 3.21 0.00 0.00 3.72
536 537 2.624316 TCTCGGTTAGCGTTAGTGTG 57.376 50.000 3.21 0.00 0.00 3.82
537 538 3.648339 TTTCTCGGTTAGCGTTAGTGT 57.352 42.857 3.21 0.00 0.00 3.55
538 539 3.122445 GGTTTTCTCGGTTAGCGTTAGTG 59.878 47.826 3.21 0.00 0.00 2.74
539 540 3.243839 TGGTTTTCTCGGTTAGCGTTAGT 60.244 43.478 3.21 0.00 0.00 2.24
540 541 3.319755 TGGTTTTCTCGGTTAGCGTTAG 58.680 45.455 3.21 0.00 0.00 2.34
541 542 3.319755 CTGGTTTTCTCGGTTAGCGTTA 58.680 45.455 3.21 0.00 0.00 3.18
542 543 2.140717 CTGGTTTTCTCGGTTAGCGTT 58.859 47.619 3.21 0.00 0.00 4.84
543 544 1.792006 CTGGTTTTCTCGGTTAGCGT 58.208 50.000 3.21 0.00 0.00 5.07
544 545 0.442699 GCTGGTTTTCTCGGTTAGCG 59.557 55.000 0.00 0.00 0.00 4.26
545 546 1.464997 CTGCTGGTTTTCTCGGTTAGC 59.535 52.381 0.00 0.00 0.00 3.09
546 547 1.464997 GCTGCTGGTTTTCTCGGTTAG 59.535 52.381 0.00 0.00 0.00 2.34
547 548 1.202710 TGCTGCTGGTTTTCTCGGTTA 60.203 47.619 0.00 0.00 0.00 2.85
548 549 0.465460 TGCTGCTGGTTTTCTCGGTT 60.465 50.000 0.00 0.00 0.00 4.44
549 550 0.465460 TTGCTGCTGGTTTTCTCGGT 60.465 50.000 0.00 0.00 0.00 4.69
550 551 0.667993 TTTGCTGCTGGTTTTCTCGG 59.332 50.000 0.00 0.00 0.00 4.63
551 552 1.334869 AGTTTGCTGCTGGTTTTCTCG 59.665 47.619 0.00 0.00 0.00 4.04
552 553 4.216257 TCATAGTTTGCTGCTGGTTTTCTC 59.784 41.667 0.00 0.00 0.00 2.87
553 554 4.144297 TCATAGTTTGCTGCTGGTTTTCT 58.856 39.130 0.00 0.00 0.00 2.52
554 555 4.479619 CTCATAGTTTGCTGCTGGTTTTC 58.520 43.478 0.00 0.00 0.00 2.29
555 556 3.305608 GCTCATAGTTTGCTGCTGGTTTT 60.306 43.478 0.00 0.00 0.00 2.43
556 557 2.229784 GCTCATAGTTTGCTGCTGGTTT 59.770 45.455 0.00 0.00 0.00 3.27
557 558 1.815003 GCTCATAGTTTGCTGCTGGTT 59.185 47.619 0.00 0.00 0.00 3.67
558 559 1.457346 GCTCATAGTTTGCTGCTGGT 58.543 50.000 0.00 0.00 0.00 4.00
559 560 0.376152 CGCTCATAGTTTGCTGCTGG 59.624 55.000 0.00 0.00 0.00 4.85
560 561 1.081892 ACGCTCATAGTTTGCTGCTG 58.918 50.000 0.00 0.00 0.00 4.41
561 562 1.813513 AACGCTCATAGTTTGCTGCT 58.186 45.000 0.00 0.00 0.00 4.24
562 563 3.740044 TTAACGCTCATAGTTTGCTGC 57.260 42.857 0.00 0.00 33.42 5.25
563 564 4.091424 GCTTTAACGCTCATAGTTTGCTG 58.909 43.478 0.00 0.00 33.42 4.41
564 565 4.003648 AGCTTTAACGCTCATAGTTTGCT 58.996 39.130 0.00 0.00 34.57 3.91
565 566 4.342352 AGCTTTAACGCTCATAGTTTGC 57.658 40.909 0.00 0.00 34.57 3.68
566 567 5.960105 GCTTAGCTTTAACGCTCATAGTTTG 59.040 40.000 10.07 0.00 41.30 2.93
567 568 5.875359 AGCTTAGCTTTAACGCTCATAGTTT 59.125 36.000 10.07 0.00 41.30 2.66
568 569 5.292101 CAGCTTAGCTTTAACGCTCATAGTT 59.708 40.000 10.07 2.55 41.30 2.24
569 570 4.806247 CAGCTTAGCTTTAACGCTCATAGT 59.194 41.667 10.07 0.00 41.30 2.12
570 571 4.210120 CCAGCTTAGCTTTAACGCTCATAG 59.790 45.833 10.07 7.79 41.30 2.23
571 572 4.119862 CCAGCTTAGCTTTAACGCTCATA 58.880 43.478 10.07 0.00 41.30 2.15
572 573 2.939103 CCAGCTTAGCTTTAACGCTCAT 59.061 45.455 10.07 0.00 41.30 2.90
573 574 2.346803 CCAGCTTAGCTTTAACGCTCA 58.653 47.619 10.07 0.00 41.30 4.26
574 575 1.666189 CCCAGCTTAGCTTTAACGCTC 59.334 52.381 10.07 0.00 41.30 5.03
575 576 1.739067 CCCAGCTTAGCTTTAACGCT 58.261 50.000 11.56 11.56 43.83 5.07
576 577 0.098905 GCCCAGCTTAGCTTTAACGC 59.901 55.000 3.00 0.00 36.40 4.84
577 578 1.398390 CAGCCCAGCTTAGCTTTAACG 59.602 52.381 3.00 0.00 36.40 3.18
578 579 1.745653 CCAGCCCAGCTTAGCTTTAAC 59.254 52.381 3.00 0.00 36.40 2.01
579 580 1.340991 CCCAGCCCAGCTTAGCTTTAA 60.341 52.381 3.00 0.00 36.40 1.52
580 581 0.255890 CCCAGCCCAGCTTAGCTTTA 59.744 55.000 3.00 0.00 36.40 1.85
581 582 1.000396 CCCAGCCCAGCTTAGCTTT 60.000 57.895 3.00 0.00 36.40 3.51
582 583 2.679716 CCCAGCCCAGCTTAGCTT 59.320 61.111 3.00 0.00 36.40 3.74
583 584 4.120755 GCCCAGCCCAGCTTAGCT 62.121 66.667 0.00 0.00 36.40 3.32
595 596 4.781959 CGCAACGCAATGGCCCAG 62.782 66.667 0.00 0.00 36.38 4.45
597 598 4.356442 AACGCAACGCAATGGCCC 62.356 61.111 0.00 0.00 36.38 5.80
598 599 3.105157 CAACGCAACGCAATGGCC 61.105 61.111 0.00 0.00 36.38 5.36
599 600 3.105157 CCAACGCAACGCAATGGC 61.105 61.111 0.00 0.00 29.64 4.40
600 601 2.430582 CCCAACGCAACGCAATGG 60.431 61.111 0.00 0.00 34.86 3.16
601 602 3.105157 GCCCAACGCAACGCAATG 61.105 61.111 0.00 0.00 37.47 2.82
610 611 3.670377 GGACCACTTGCCCAACGC 61.670 66.667 0.00 0.00 38.31 4.84
611 612 1.106944 AAAGGACCACTTGCCCAACG 61.107 55.000 0.00 0.00 39.96 4.10
612 613 1.119684 AAAAGGACCACTTGCCCAAC 58.880 50.000 0.00 0.00 39.96 3.77
613 614 1.118838 CAAAAGGACCACTTGCCCAA 58.881 50.000 0.00 0.00 39.96 4.12
614 615 0.758685 CCAAAAGGACCACTTGCCCA 60.759 55.000 0.00 0.00 39.96 5.36
615 616 0.469144 TCCAAAAGGACCACTTGCCC 60.469 55.000 0.00 0.00 39.96 5.36
616 617 0.673985 GTCCAAAAGGACCACTTGCC 59.326 55.000 3.27 0.00 39.96 4.52
617 618 1.398692 TGTCCAAAAGGACCACTTGC 58.601 50.000 11.79 0.00 39.96 4.01
618 619 4.464069 TTTTGTCCAAAAGGACCACTTG 57.536 40.909 11.79 0.00 39.96 3.16
637 638 2.699846 TGGCCAGACTTGCAAGATTTTT 59.300 40.909 32.50 10.03 0.00 1.94
638 639 2.298163 CTGGCCAGACTTGCAAGATTTT 59.702 45.455 32.50 10.45 30.97 1.82
639 640 1.891150 CTGGCCAGACTTGCAAGATTT 59.109 47.619 32.50 10.86 30.97 2.17
640 641 1.202976 ACTGGCCAGACTTGCAAGATT 60.203 47.619 39.19 16.53 33.79 2.40
641 642 0.403271 ACTGGCCAGACTTGCAAGAT 59.597 50.000 39.19 17.33 33.79 2.40
642 643 0.183492 AACTGGCCAGACTTGCAAGA 59.817 50.000 39.19 7.52 33.79 3.02
643 644 1.537202 GTAACTGGCCAGACTTGCAAG 59.463 52.381 39.19 24.84 35.80 4.01
644 645 1.604604 GTAACTGGCCAGACTTGCAA 58.395 50.000 39.19 12.39 0.00 4.08
645 646 0.602638 CGTAACTGGCCAGACTTGCA 60.603 55.000 39.19 13.47 0.00 4.08
646 647 1.912371 GCGTAACTGGCCAGACTTGC 61.912 60.000 39.19 29.09 0.00 4.01
647 648 2.162716 GCGTAACTGGCCAGACTTG 58.837 57.895 39.19 24.26 0.00 3.16
648 649 4.695560 GCGTAACTGGCCAGACTT 57.304 55.556 39.19 25.06 0.00 3.01
655 656 3.196648 CCAATGGGCGTAACTGGC 58.803 61.111 0.00 0.00 0.00 4.85
665 666 3.669344 AACACGCACGCCAATGGG 61.669 61.111 0.00 0.00 38.44 4.00
677 678 7.201199 CGTTTGTAAAATGGCTATTACAACACG 60.201 37.037 22.41 22.41 46.17 4.49
678 679 7.061326 CCGTTTGTAAAATGGCTATTACAACAC 59.939 37.037 16.78 15.86 46.17 3.32
679 680 7.040617 TCCGTTTGTAAAATGGCTATTACAACA 60.041 33.333 16.78 5.87 46.17 3.33
680 681 7.306953 TCCGTTTGTAAAATGGCTATTACAAC 58.693 34.615 16.78 3.68 46.17 3.32
689 690 2.758423 AGGGATCCGTTTGTAAAATGGC 59.242 45.455 5.45 0.00 0.00 4.40
696 697 3.442273 GCAAAATCAGGGATCCGTTTGTA 59.558 43.478 3.63 0.00 0.00 2.41
697 698 2.231235 GCAAAATCAGGGATCCGTTTGT 59.769 45.455 3.63 0.00 0.00 2.83
726 727 3.696051 TCTGTTTCTTGCTGCTCTTGTTT 59.304 39.130 0.00 0.00 0.00 2.83
736 737 3.428045 GCAACAACACTCTGTTTCTTGCT 60.428 43.478 14.60 0.00 42.49 3.91
750 751 1.538634 GCAAATCTGGCTGCAACAACA 60.539 47.619 0.50 0.00 38.48 3.33
767 768 3.074390 TCCTGGAAGAATTGAGGAAGCAA 59.926 43.478 0.00 0.00 31.99 3.91
777 778 0.676782 CCGCCGTTCCTGGAAGAATT 60.677 55.000 9.92 0.00 34.07 2.17
924 937 0.756815 GGCAGGGGTGGATTGGATTC 60.757 60.000 0.00 0.00 0.00 2.52
1473 1495 7.685481 TCTAATGGTTGATACAGTCCTTTTGA 58.315 34.615 0.00 0.00 0.00 2.69
1485 1507 9.066892 GGCAAATTCTGTATCTAATGGTTGATA 57.933 33.333 0.00 0.00 0.00 2.15
1757 3353 5.819901 TCCAAATTGAAAATTGGGTTGTCAC 59.180 36.000 9.46 0.00 44.99 3.67
1758 3354 5.994250 TCCAAATTGAAAATTGGGTTGTCA 58.006 33.333 9.46 0.00 44.99 3.58
1759 3355 6.486320 ACATCCAAATTGAAAATTGGGTTGTC 59.514 34.615 13.57 0.00 44.99 3.18
1760 3356 6.363882 ACATCCAAATTGAAAATTGGGTTGT 58.636 32.000 13.57 13.57 44.99 3.32
1761 3357 6.880942 ACATCCAAATTGAAAATTGGGTTG 57.119 33.333 9.46 12.62 44.99 3.77
1763 3359 9.665719 GTATAACATCCAAATTGAAAATTGGGT 57.334 29.630 9.46 0.38 44.99 4.51
1764 3360 9.664332 TGTATAACATCCAAATTGAAAATTGGG 57.336 29.630 9.46 4.13 44.99 4.12
2124 3734 6.332630 ACAAAGTGAACATTTTTCTGGTCTG 58.667 36.000 0.00 0.00 33.84 3.51
2127 3737 6.935167 AGAACAAAGTGAACATTTTTCTGGT 58.065 32.000 0.47 0.00 0.00 4.00
2168 3778 4.582701 ATGCGAAGAACAATTTTCACCA 57.417 36.364 0.00 0.00 0.00 4.17
2217 3831 4.680171 AGTTCCGCCTAAAGAAAAATCG 57.320 40.909 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.