Multiple sequence alignment - TraesCS3D01G215500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G215500 chr3D 100.000 3009 0 0 735 3743 291765079 291768087 0.000000e+00 5557.0
1 TraesCS3D01G215500 chr3D 100.000 703 0 0 1 703 291764345 291765047 0.000000e+00 1299.0
2 TraesCS3D01G215500 chr3D 99.704 338 1 0 735 1072 291764710 291765047 1.480000e-173 619.0
3 TraesCS3D01G215500 chr3D 99.704 338 1 0 366 703 291765079 291765416 1.480000e-173 619.0
4 TraesCS3D01G215500 chr3D 79.021 858 153 23 1178 2020 75355829 75356674 2.520000e-156 562.0
5 TraesCS3D01G215500 chr3D 92.537 67 3 2 3673 3738 278980932 278980867 1.110000e-15 95.3
6 TraesCS3D01G215500 chr3D 91.176 68 4 2 3671 3737 7400497 7400563 1.430000e-14 91.6
7 TraesCS3D01G215500 chr3D 84.091 88 10 3 2528 2613 291766797 291766882 8.620000e-12 82.4
8 TraesCS3D01G215500 chr3D 84.091 88 10 3 2453 2538 291766872 291766957 8.620000e-12 82.4
9 TraesCS3D01G215500 chr3B 95.583 1562 44 6 735 2278 384909469 384911023 0.000000e+00 2479.0
10 TraesCS3D01G215500 chr3B 92.289 1219 34 14 2223 3407 384910917 384912109 0.000000e+00 1676.0
11 TraesCS3D01G215500 chr3B 92.022 727 20 18 2 703 384909110 384909823 0.000000e+00 987.0
12 TraesCS3D01G215500 chr3B 80.842 689 113 16 1178 1855 121575991 121576671 1.190000e-144 523.0
13 TraesCS3D01G215500 chr3B 83.721 86 14 0 2528 2613 384911132 384911217 8.620000e-12 82.4
14 TraesCS3D01G215500 chr3A 97.449 1333 22 5 963 2289 384319779 384321105 0.000000e+00 2263.0
15 TraesCS3D01G215500 chr3A 92.333 1200 28 15 2223 3396 384320988 384322149 0.000000e+00 1648.0
16 TraesCS3D01G215500 chr3A 86.157 484 17 23 2 474 384318882 384319326 9.410000e-131 477.0
17 TraesCS3D01G215500 chr3A 98.165 109 2 0 594 702 384319779 384319887 1.370000e-44 191.0
18 TraesCS3D01G215500 chr3A 91.525 118 1 2 735 843 384319209 384319326 1.800000e-33 154.0
19 TraesCS3D01G215500 chr3A 91.176 68 2 3 3673 3738 455035143 455035078 5.150000e-14 89.8
20 TraesCS3D01G215500 chr3A 82.558 86 15 0 2528 2613 384321218 384321303 4.010000e-10 76.8
21 TraesCS3D01G215500 chr1D 79.027 863 155 22 1165 2014 119010746 119009897 5.430000e-158 568.0
22 TraesCS3D01G215500 chr1D 95.000 160 8 0 3418 3577 307464678 307464519 6.210000e-63 252.0
23 TraesCS3D01G215500 chr1D 93.210 162 9 1 3418 3577 248253630 248253469 1.740000e-58 237.0
24 TraesCS3D01G215500 chr1A 78.670 872 158 26 1157 2014 131521542 131520685 4.220000e-154 555.0
25 TraesCS3D01G215500 chr1A 92.647 68 5 0 3671 3738 369574650 369574583 8.560000e-17 99.0
26 TraesCS3D01G215500 chr1B 77.851 912 171 26 1118 2014 181218267 181217372 1.530000e-148 536.0
27 TraesCS3D01G215500 chr1B 91.429 70 4 2 3670 3738 619091261 619091329 1.110000e-15 95.3
28 TraesCS3D01G215500 chr6D 76.818 880 173 27 1154 2015 60168253 60167387 2.040000e-127 466.0
29 TraesCS3D01G215500 chr6D 92.754 69 3 2 3671 3738 139307691 139307624 8.560000e-17 99.0
30 TraesCS3D01G215500 chr6B 76.531 882 172 30 1154 2015 134000296 133999430 2.050000e-122 449.0
31 TraesCS3D01G215500 chr7A 78.267 681 138 8 1145 1817 606330998 606330320 2.670000e-116 429.0
32 TraesCS3D01G215500 chr7A 91.304 161 12 2 3418 3577 229838615 229838456 6.290000e-53 219.0
33 TraesCS3D01G215500 chr7A 91.304 69 6 0 3670 3738 696010756 696010688 1.110000e-15 95.3
34 TraesCS3D01G215500 chr7D 95.597 159 7 0 3418 3576 159649343 159649501 4.800000e-64 255.0
35 TraesCS3D01G215500 chr7D 91.925 161 11 2 3418 3577 369381057 369381216 1.350000e-54 224.0
36 TraesCS3D01G215500 chr4D 93.750 160 10 0 3418 3577 57684754 57684595 1.340000e-59 241.0
37 TraesCS3D01G215500 chr4D 93.125 160 11 0 3418 3577 216152586 216152427 6.250000e-58 235.0
38 TraesCS3D01G215500 chr7B 91.925 161 11 2 3418 3577 553217485 553217326 1.350000e-54 224.0
39 TraesCS3D01G215500 chr6A 89.375 160 17 0 3418 3577 75920021 75920180 6.340000e-48 202.0
40 TraesCS3D01G215500 chr5D 94.118 68 3 1 3670 3736 477027185 477027118 6.610000e-18 102.0
41 TraesCS3D01G215500 chr5A 90.141 71 3 3 3669 3737 445551445 445551377 5.150000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G215500 chr3D 291764345 291768087 3742 False 1376.466667 5557 94.598333 1 3743 6 chr3D.!!$F3 3742
1 TraesCS3D01G215500 chr3D 75355829 75356674 845 False 562.000000 562 79.021000 1178 2020 1 chr3D.!!$F2 842
2 TraesCS3D01G215500 chr3B 384909110 384912109 2999 False 1306.100000 2479 90.903750 2 3407 4 chr3B.!!$F2 3405
3 TraesCS3D01G215500 chr3B 121575991 121576671 680 False 523.000000 523 80.842000 1178 1855 1 chr3B.!!$F1 677
4 TraesCS3D01G215500 chr3A 384318882 384322149 3267 False 801.633333 2263 91.364500 2 3396 6 chr3A.!!$F1 3394
5 TraesCS3D01G215500 chr1D 119009897 119010746 849 True 568.000000 568 79.027000 1165 2014 1 chr1D.!!$R1 849
6 TraesCS3D01G215500 chr1A 131520685 131521542 857 True 555.000000 555 78.670000 1157 2014 1 chr1A.!!$R1 857
7 TraesCS3D01G215500 chr1B 181217372 181218267 895 True 536.000000 536 77.851000 1118 2014 1 chr1B.!!$R1 896
8 TraesCS3D01G215500 chr6D 60167387 60168253 866 True 466.000000 466 76.818000 1154 2015 1 chr6D.!!$R1 861
9 TraesCS3D01G215500 chr6B 133999430 134000296 866 True 449.000000 449 76.531000 1154 2015 1 chr6B.!!$R1 861
10 TraesCS3D01G215500 chr7A 606330320 606330998 678 True 429.000000 429 78.267000 1145 1817 1 chr7A.!!$R2 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
959 1316 0.032813 CCCCTCAAACCCATGAGCAT 60.033 55.0 0.0 0.0 44.43 3.79 F
2160 2529 0.179094 AGAAGTTCGTGTTGCCGTCA 60.179 50.0 0.0 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2307 2676 0.321996 GTGAAGGTGGTGGAGGAGAC 59.678 60.0 0.0 0.0 0.0 3.36 R
3505 3927 0.032416 TGTAGGAGTGGGGTAGAGGC 60.032 60.0 0.0 0.0 0.0 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
202 208 2.159462 GCAGCTAGCATCGCTTTCTTTT 60.159 45.455 18.83 0.00 44.79 2.27
204 210 4.437390 GCAGCTAGCATCGCTTTCTTTTTA 60.437 41.667 18.83 0.00 44.79 1.52
205 211 5.731686 GCAGCTAGCATCGCTTTCTTTTTAT 60.732 40.000 18.83 0.00 44.79 1.40
207 213 4.900747 GCTAGCATCGCTTTCTTTTTATCG 59.099 41.667 10.63 0.00 40.44 2.92
209 215 3.689649 AGCATCGCTTTCTTTTTATCGGT 59.310 39.130 0.00 0.00 33.89 4.69
210 216 3.786048 GCATCGCTTTCTTTTTATCGGTG 59.214 43.478 0.00 0.00 0.00 4.94
211 217 4.436852 GCATCGCTTTCTTTTTATCGGTGA 60.437 41.667 0.00 0.00 30.51 4.02
212 218 5.730568 GCATCGCTTTCTTTTTATCGGTGAT 60.731 40.000 0.00 0.00 30.51 3.06
217 223 8.545420 TCGCTTTCTTTTTATCGGTGATATAAC 58.455 33.333 0.00 0.00 0.00 1.89
249 255 7.825709 TCACCCTGATAATTTATTCCCTTCAT 58.174 34.615 0.00 0.00 0.00 2.57
276 282 1.120437 GGTGAGCGCAAAAGAAAACG 58.880 50.000 11.47 0.00 0.00 3.60
292 298 2.776072 CGCCGTTCGTTGATGACC 59.224 61.111 0.00 0.00 0.00 4.02
297 303 1.669760 GTTCGTTGATGACCCGCCA 60.670 57.895 0.00 0.00 0.00 5.69
337 350 9.834628 TCGTAAAAAGAAAAGCCAATTATACTG 57.165 29.630 0.00 0.00 0.00 2.74
338 351 9.620660 CGTAAAAAGAAAAGCCAATTATACTGT 57.379 29.630 0.00 0.00 0.00 3.55
409 422 2.129555 TTGTGGAAGGCAGCTCCTCC 62.130 60.000 5.34 8.61 46.94 4.30
566 588 0.625980 TGCTCCCCCATATGAACCCA 60.626 55.000 3.65 0.00 0.00 4.51
567 589 0.178990 GCTCCCCCATATGAACCCAC 60.179 60.000 3.65 0.00 0.00 4.61
568 590 0.478507 CTCCCCCATATGAACCCACC 59.521 60.000 3.65 0.00 0.00 4.61
662 1019 4.740822 GGCAATGGCGACCACCCT 62.741 66.667 0.50 0.00 42.47 4.34
663 1020 3.134127 GCAATGGCGACCACCCTC 61.134 66.667 0.50 0.00 35.80 4.30
664 1021 2.438434 CAATGGCGACCACCCTCC 60.438 66.667 0.50 0.00 35.80 4.30
665 1022 2.610859 AATGGCGACCACCCTCCT 60.611 61.111 0.50 0.00 35.80 3.69
666 1023 2.670148 AATGGCGACCACCCTCCTC 61.670 63.158 0.50 0.00 35.80 3.71
667 1024 3.625632 ATGGCGACCACCCTCCTCT 62.626 63.158 0.50 0.00 35.80 3.69
668 1025 3.003763 GGCGACCACCCTCCTCTT 61.004 66.667 0.00 0.00 0.00 2.85
672 1029 1.324005 CGACCACCCTCCTCTTCCTC 61.324 65.000 0.00 0.00 0.00 3.71
673 1030 1.305381 ACCACCCTCCTCTTCCTCG 60.305 63.158 0.00 0.00 0.00 4.63
674 1031 2.726351 CCACCCTCCTCTTCCTCGC 61.726 68.421 0.00 0.00 0.00 5.03
675 1032 2.756283 ACCCTCCTCTTCCTCGCG 60.756 66.667 0.00 0.00 0.00 5.87
676 1033 4.214327 CCCTCCTCTTCCTCGCGC 62.214 72.222 0.00 0.00 0.00 6.86
677 1034 3.144193 CCTCCTCTTCCTCGCGCT 61.144 66.667 5.56 0.00 0.00 5.92
678 1035 2.103934 CTCCTCTTCCTCGCGCTG 59.896 66.667 5.56 0.00 0.00 5.18
679 1036 4.135153 TCCTCTTCCTCGCGCTGC 62.135 66.667 5.56 0.00 0.00 5.25
680 1037 4.140599 CCTCTTCCTCGCGCTGCT 62.141 66.667 5.56 0.00 0.00 4.24
681 1038 2.581953 CTCTTCCTCGCGCTGCTC 60.582 66.667 5.56 0.00 0.00 4.26
682 1039 4.135153 TCTTCCTCGCGCTGCTCC 62.135 66.667 5.56 0.00 0.00 4.70
683 1040 4.140599 CTTCCTCGCGCTGCTCCT 62.141 66.667 5.56 0.00 0.00 3.69
684 1041 4.135153 TTCCTCGCGCTGCTCCTC 62.135 66.667 5.56 0.00 0.00 3.71
693 1050 4.803426 CTGCTCCTCGTCCCGCAC 62.803 72.222 0.00 0.00 0.00 5.34
696 1053 3.827898 CTCCTCGTCCCGCACCTC 61.828 72.222 0.00 0.00 0.00 3.85
752 1109 2.086510 AATGCGATCAAACGACCCG 58.913 52.632 0.00 0.00 35.09 5.28
753 1110 0.390603 AATGCGATCAAACGACCCGA 60.391 50.000 0.00 0.00 35.09 5.14
754 1111 1.082117 ATGCGATCAAACGACCCGAC 61.082 55.000 0.00 0.00 35.09 4.79
755 1112 2.785105 GCGATCAAACGACCCGACG 61.785 63.158 0.00 0.00 39.31 5.12
756 1113 1.154169 CGATCAAACGACCCGACGA 60.154 57.895 0.00 0.00 37.03 4.20
757 1114 1.400990 CGATCAAACGACCCGACGAC 61.401 60.000 0.00 0.00 37.03 4.34
758 1115 1.400990 GATCAAACGACCCGACGACG 61.401 60.000 0.00 0.00 37.03 5.12
759 1116 2.133742 ATCAAACGACCCGACGACGT 62.134 55.000 0.00 0.00 41.97 4.34
761 1118 1.945662 AAACGACCCGACGACGTTG 60.946 57.895 20.60 8.34 46.74 4.10
762 1119 2.612219 AAACGACCCGACGACGTTGT 62.612 55.000 20.60 8.55 46.74 3.32
763 1120 3.095278 CGACCCGACGACGTTGTG 61.095 66.667 14.59 5.31 37.88 3.33
764 1121 2.732094 GACCCGACGACGTTGTGG 60.732 66.667 14.59 12.45 37.88 4.17
765 1122 3.198236 GACCCGACGACGTTGTGGA 62.198 63.158 18.55 0.00 37.88 4.02
766 1123 2.027897 CCCGACGACGTTGTGGAA 59.972 61.111 18.55 0.00 37.88 3.53
767 1124 2.019951 CCCGACGACGTTGTGGAAG 61.020 63.158 18.55 6.54 37.88 3.46
768 1125 2.019951 CCGACGACGTTGTGGAAGG 61.020 63.158 18.55 10.07 37.88 3.46
769 1126 2.654912 CGACGACGTTGTGGAAGGC 61.655 63.158 14.59 0.00 34.56 4.35
770 1127 1.593209 GACGACGTTGTGGAAGGCA 60.593 57.895 14.59 0.00 0.00 4.75
771 1128 1.557443 GACGACGTTGTGGAAGGCAG 61.557 60.000 14.59 0.00 0.00 4.85
772 1129 2.946762 GACGTTGTGGAAGGCAGC 59.053 61.111 0.00 0.00 0.00 5.25
773 1130 1.598130 GACGTTGTGGAAGGCAGCT 60.598 57.895 0.00 0.00 0.00 4.24
774 1131 1.569479 GACGTTGTGGAAGGCAGCTC 61.569 60.000 0.00 0.00 0.00 4.09
775 1132 2.328099 CGTTGTGGAAGGCAGCTCC 61.328 63.158 0.00 0.00 0.00 4.70
777 1134 0.957888 GTTGTGGAAGGCAGCTCCTC 60.958 60.000 5.34 0.00 46.94 3.71
778 1135 2.129555 TTGTGGAAGGCAGCTCCTCC 62.130 60.000 5.34 8.61 46.94 4.30
779 1136 2.123632 TGGAAGGCAGCTCCTCCT 59.876 61.111 5.34 0.00 46.94 3.69
780 1137 1.992277 TGGAAGGCAGCTCCTCCTC 60.992 63.158 5.34 1.56 46.94 3.71
781 1138 2.741055 GGAAGGCAGCTCCTCCTCC 61.741 68.421 5.34 6.28 46.94 4.30
782 1139 1.992277 GAAGGCAGCTCCTCCTCCA 60.992 63.158 5.34 0.00 46.94 3.86
783 1140 1.970352 GAAGGCAGCTCCTCCTCCAG 61.970 65.000 5.34 0.00 46.94 3.86
784 1141 4.173924 GGCAGCTCCTCCTCCAGC 62.174 72.222 0.00 0.00 35.73 4.85
787 1144 3.082701 AGCTCCTCCTCCAGCTGC 61.083 66.667 8.66 0.00 44.58 5.25
788 1145 4.173924 GCTCCTCCTCCAGCTGCC 62.174 72.222 8.66 0.00 32.48 4.85
789 1146 3.847602 CTCCTCCTCCAGCTGCCG 61.848 72.222 8.66 0.31 0.00 5.69
792 1149 3.710722 CTCCTCCAGCTGCCGGTT 61.711 66.667 8.66 0.00 0.00 4.44
793 1150 3.965539 CTCCTCCAGCTGCCGGTTG 62.966 68.421 8.66 4.83 0.00 3.77
794 1151 4.020617 CCTCCAGCTGCCGGTTGA 62.021 66.667 8.66 0.00 0.00 3.18
795 1152 2.270205 CTCCAGCTGCCGGTTGAT 59.730 61.111 8.66 0.00 0.00 2.57
796 1153 1.817099 CTCCAGCTGCCGGTTGATC 60.817 63.158 8.66 0.00 0.00 2.92
797 1154 2.825836 CCAGCTGCCGGTTGATCC 60.826 66.667 8.66 0.00 0.00 3.36
819 1176 3.474806 GAGCGTTGGTCCATCACG 58.525 61.111 11.10 11.10 0.00 4.35
821 1178 4.147322 GCGTTGGTCCATCACGCG 62.147 66.667 21.76 3.53 39.94 6.01
822 1179 4.147322 CGTTGGTCCATCACGCGC 62.147 66.667 5.73 0.00 0.00 6.86
823 1180 3.047280 GTTGGTCCATCACGCGCA 61.047 61.111 5.73 0.00 0.00 6.09
824 1181 3.047280 TTGGTCCATCACGCGCAC 61.047 61.111 5.73 0.00 0.00 5.34
825 1182 3.816367 TTGGTCCATCACGCGCACA 62.816 57.895 5.73 0.00 0.00 4.57
826 1183 3.788766 GGTCCATCACGCGCACAC 61.789 66.667 5.73 0.00 0.00 3.82
827 1184 4.134187 GTCCATCACGCGCACACG 62.134 66.667 5.73 0.00 44.07 4.49
837 1194 3.882013 CGCACACGCAACCAACCA 61.882 61.111 0.00 0.00 38.40 3.67
838 1195 2.492090 GCACACGCAACCAACCAA 59.508 55.556 0.00 0.00 38.36 3.67
839 1196 1.153745 GCACACGCAACCAACCAAA 60.154 52.632 0.00 0.00 38.36 3.28
840 1197 1.145162 GCACACGCAACCAACCAAAG 61.145 55.000 0.00 0.00 38.36 2.77
841 1198 1.140804 ACACGCAACCAACCAAAGC 59.859 52.632 0.00 0.00 0.00 3.51
842 1199 1.591327 CACGCAACCAACCAAAGCC 60.591 57.895 0.00 0.00 0.00 4.35
843 1200 2.055042 ACGCAACCAACCAAAGCCA 61.055 52.632 0.00 0.00 0.00 4.75
844 1201 1.367102 CGCAACCAACCAAAGCCAT 59.633 52.632 0.00 0.00 0.00 4.40
845 1202 0.667184 CGCAACCAACCAAAGCCATC 60.667 55.000 0.00 0.00 0.00 3.51
846 1203 0.320683 GCAACCAACCAAAGCCATCC 60.321 55.000 0.00 0.00 0.00 3.51
847 1204 0.321346 CAACCAACCAAAGCCATCCC 59.679 55.000 0.00 0.00 0.00 3.85
848 1205 1.184970 AACCAACCAAAGCCATCCCG 61.185 55.000 0.00 0.00 0.00 5.14
849 1206 2.573340 CAACCAAAGCCATCCCGC 59.427 61.111 0.00 0.00 0.00 6.13
850 1207 3.061848 AACCAAAGCCATCCCGCG 61.062 61.111 0.00 0.00 0.00 6.46
851 1208 3.561120 AACCAAAGCCATCCCGCGA 62.561 57.895 8.23 0.00 0.00 5.87
852 1209 2.516930 CCAAAGCCATCCCGCGAT 60.517 61.111 8.23 0.00 0.00 4.58
853 1210 2.546494 CCAAAGCCATCCCGCGATC 61.546 63.158 8.23 0.00 0.00 3.69
854 1211 2.588877 AAAGCCATCCCGCGATCG 60.589 61.111 11.69 11.69 0.00 3.69
875 1232 3.131478 CCGTCCGGCCCAATCAAC 61.131 66.667 0.00 0.00 0.00 3.18
876 1233 3.496131 CGTCCGGCCCAATCAACG 61.496 66.667 0.00 0.00 0.00 4.10
877 1234 3.810896 GTCCGGCCCAATCAACGC 61.811 66.667 0.00 0.00 0.00 4.84
882 1239 3.825611 GCCCAATCAACGCGCCAT 61.826 61.111 5.73 0.00 0.00 4.40
883 1240 2.884367 CCCAATCAACGCGCCATT 59.116 55.556 5.73 0.00 0.00 3.16
884 1241 1.999071 GCCCAATCAACGCGCCATTA 61.999 55.000 5.73 0.00 0.00 1.90
885 1242 0.667993 CCCAATCAACGCGCCATTAT 59.332 50.000 5.73 0.00 0.00 1.28
886 1243 1.066908 CCCAATCAACGCGCCATTATT 59.933 47.619 5.73 0.00 0.00 1.40
887 1244 2.384382 CCAATCAACGCGCCATTATTC 58.616 47.619 5.73 0.00 0.00 1.75
888 1245 2.033299 CCAATCAACGCGCCATTATTCT 59.967 45.455 5.73 0.00 0.00 2.40
889 1246 3.249799 CCAATCAACGCGCCATTATTCTA 59.750 43.478 5.73 0.00 0.00 2.10
890 1247 4.083324 CCAATCAACGCGCCATTATTCTAT 60.083 41.667 5.73 0.00 0.00 1.98
891 1248 5.451908 CAATCAACGCGCCATTATTCTATT 58.548 37.500 5.73 0.00 0.00 1.73
892 1249 4.725556 TCAACGCGCCATTATTCTATTC 57.274 40.909 5.73 0.00 0.00 1.75
893 1250 3.496884 TCAACGCGCCATTATTCTATTCC 59.503 43.478 5.73 0.00 0.00 3.01
894 1251 2.423577 ACGCGCCATTATTCTATTCCC 58.576 47.619 5.73 0.00 0.00 3.97
895 1252 1.393539 CGCGCCATTATTCTATTCCCG 59.606 52.381 0.00 0.00 0.00 5.14
896 1253 1.130561 GCGCCATTATTCTATTCCCGC 59.869 52.381 0.00 0.00 0.00 6.13
897 1254 1.393539 CGCCATTATTCTATTCCCGCG 59.606 52.381 0.00 0.00 0.00 6.46
898 1255 1.130561 GCCATTATTCTATTCCCGCGC 59.869 52.381 0.00 0.00 0.00 6.86
899 1256 1.737793 CCATTATTCTATTCCCGCGCC 59.262 52.381 0.00 0.00 0.00 6.53
900 1257 1.393539 CATTATTCTATTCCCGCGCCG 59.606 52.381 0.00 0.00 0.00 6.46
901 1258 0.947180 TTATTCTATTCCCGCGCCGC 60.947 55.000 0.00 0.00 0.00 6.53
916 1273 4.489771 CGCGATTTGGCCTCCCCT 62.490 66.667 0.00 0.00 0.00 4.79
917 1274 2.830370 GCGATTTGGCCTCCCCTG 60.830 66.667 3.32 0.00 0.00 4.45
918 1275 2.830370 CGATTTGGCCTCCCCTGC 60.830 66.667 3.32 0.00 0.00 4.85
919 1276 2.685999 GATTTGGCCTCCCCTGCT 59.314 61.111 3.32 0.00 0.00 4.24
920 1277 1.454663 GATTTGGCCTCCCCTGCTC 60.455 63.158 3.32 0.00 0.00 4.26
921 1278 2.918300 GATTTGGCCTCCCCTGCTCC 62.918 65.000 3.32 0.00 0.00 4.70
938 1295 3.342387 CCCCCTATGAACCCACCC 58.658 66.667 0.00 0.00 0.00 4.61
939 1296 2.391972 CCCCCTATGAACCCACCCC 61.392 68.421 0.00 0.00 0.00 4.95
940 1297 2.391972 CCCCTATGAACCCACCCCC 61.392 68.421 0.00 0.00 0.00 5.40
957 1314 1.380380 CCCCCTCAAACCCATGAGC 60.380 63.158 0.00 0.00 44.43 4.26
958 1315 1.383799 CCCCTCAAACCCATGAGCA 59.616 57.895 0.00 0.00 44.43 4.26
959 1316 0.032813 CCCCTCAAACCCATGAGCAT 60.033 55.000 0.00 0.00 44.43 3.79
960 1317 1.396653 CCCTCAAACCCATGAGCATC 58.603 55.000 0.00 0.00 44.43 3.91
961 1318 1.396653 CCTCAAACCCATGAGCATCC 58.603 55.000 0.00 0.00 44.43 3.51
962 1319 1.341285 CCTCAAACCCATGAGCATCCA 60.341 52.381 0.00 0.00 44.43 3.41
963 1320 2.662866 CTCAAACCCATGAGCATCCAT 58.337 47.619 0.00 0.00 40.31 3.41
964 1321 2.621998 CTCAAACCCATGAGCATCCATC 59.378 50.000 0.00 0.00 40.31 3.51
965 1322 1.684983 CAAACCCATGAGCATCCATCC 59.315 52.381 0.00 0.00 0.00 3.51
966 1323 0.928505 AACCCATGAGCATCCATCCA 59.071 50.000 0.00 0.00 0.00 3.41
967 1324 0.184451 ACCCATGAGCATCCATCCAC 59.816 55.000 0.00 0.00 0.00 4.02
968 1325 0.887836 CCCATGAGCATCCATCCACG 60.888 60.000 0.00 0.00 0.00 4.94
969 1326 1.512996 CCATGAGCATCCATCCACGC 61.513 60.000 0.00 0.00 0.00 5.34
970 1327 1.228063 ATGAGCATCCATCCACGCC 60.228 57.895 0.00 0.00 0.00 5.68
971 1328 1.986632 ATGAGCATCCATCCACGCCA 61.987 55.000 0.00 0.00 0.00 5.69
972 1329 2.124570 AGCATCCATCCACGCCAC 60.125 61.111 0.00 0.00 0.00 5.01
973 1330 2.438254 GCATCCATCCACGCCACA 60.438 61.111 0.00 0.00 0.00 4.17
974 1331 2.764314 GCATCCATCCACGCCACAC 61.764 63.158 0.00 0.00 0.00 3.82
975 1332 2.114670 CATCCATCCACGCCACACC 61.115 63.158 0.00 0.00 0.00 4.16
976 1333 2.601702 ATCCATCCACGCCACACCA 61.602 57.895 0.00 0.00 0.00 4.17
977 1334 2.819984 ATCCATCCACGCCACACCAC 62.820 60.000 0.00 0.00 0.00 4.16
978 1335 2.281414 CATCCACGCCACACCACA 60.281 61.111 0.00 0.00 0.00 4.17
979 1336 2.281484 ATCCACGCCACACCACAC 60.281 61.111 0.00 0.00 0.00 3.82
980 1337 3.113514 ATCCACGCCACACCACACA 62.114 57.895 0.00 0.00 0.00 3.72
981 1338 3.582120 CCACGCCACACCACACAC 61.582 66.667 0.00 0.00 0.00 3.82
982 1339 2.821810 CACGCCACACCACACACA 60.822 61.111 0.00 0.00 0.00 3.72
983 1340 2.513666 ACGCCACACCACACACAG 60.514 61.111 0.00 0.00 0.00 3.66
984 1341 3.952675 CGCCACACCACACACAGC 61.953 66.667 0.00 0.00 0.00 4.40
985 1342 3.595758 GCCACACCACACACAGCC 61.596 66.667 0.00 0.00 0.00 4.85
986 1343 2.906897 CCACACCACACACAGCCC 60.907 66.667 0.00 0.00 0.00 5.19
987 1344 3.279116 CACACCACACACAGCCCG 61.279 66.667 0.00 0.00 0.00 6.13
1009 1366 3.508840 GGGCTACCATGCGCACAC 61.509 66.667 14.90 0.00 43.95 3.82
1010 1367 2.745884 GGCTACCATGCGCACACA 60.746 61.111 14.90 0.00 0.00 3.72
1011 1368 2.753966 GGCTACCATGCGCACACAG 61.754 63.158 14.90 9.12 0.00 3.66
1012 1369 1.741401 GCTACCATGCGCACACAGA 60.741 57.895 14.90 0.00 0.00 3.41
1013 1370 1.970917 GCTACCATGCGCACACAGAC 61.971 60.000 14.90 0.00 0.00 3.51
1014 1371 1.686566 CTACCATGCGCACACAGACG 61.687 60.000 14.90 0.00 0.00 4.18
1015 1372 3.792047 CCATGCGCACACAGACGG 61.792 66.667 14.90 0.38 0.00 4.79
1016 1373 4.450122 CATGCGCACACAGACGGC 62.450 66.667 14.90 0.00 0.00 5.68
1017 1374 4.986645 ATGCGCACACAGACGGCA 62.987 61.111 14.90 0.00 38.09 5.69
1019 1376 3.726517 GCGCACACAGACGGCAAT 61.727 61.111 0.30 0.00 0.00 3.56
1020 1377 2.174107 CGCACACAGACGGCAATG 59.826 61.111 0.00 0.00 0.00 2.82
1021 1378 2.562912 GCACACAGACGGCAATGG 59.437 61.111 0.00 0.00 0.00 3.16
1022 1379 2.562912 CACACAGACGGCAATGGC 59.437 61.111 0.00 0.00 40.13 4.40
1929 2298 2.426023 GGTCACAACCGCCTCAGT 59.574 61.111 0.00 0.00 35.36 3.41
2067 2436 1.375523 GAACTGCATCCCGAACCGT 60.376 57.895 0.00 0.00 0.00 4.83
2121 2490 3.316029 TCTTCAACAGCAACCATGTCAAG 59.684 43.478 0.00 0.00 0.00 3.02
2133 2502 0.884704 ATGTCAAGTGCGACGCCTTT 60.885 50.000 18.69 8.75 38.84 3.11
2160 2529 0.179094 AGAAGTTCGTGTTGCCGTCA 60.179 50.000 0.00 0.00 0.00 4.35
2214 2583 2.765807 CCATCTCCTCCGCCACCT 60.766 66.667 0.00 0.00 0.00 4.00
2215 2584 2.370445 CCATCTCCTCCGCCACCTT 61.370 63.158 0.00 0.00 0.00 3.50
2216 2585 1.144936 CATCTCCTCCGCCACCTTC 59.855 63.158 0.00 0.00 0.00 3.46
2217 2586 1.306141 ATCTCCTCCGCCACCTTCA 60.306 57.895 0.00 0.00 0.00 3.02
2218 2587 1.617947 ATCTCCTCCGCCACCTTCAC 61.618 60.000 0.00 0.00 0.00 3.18
2219 2588 3.316573 CTCCTCCGCCACCTTCACC 62.317 68.421 0.00 0.00 0.00 4.02
2260 2629 2.663196 CTCCACCAACCCCGTCTC 59.337 66.667 0.00 0.00 0.00 3.36
2261 2630 2.926242 TCCACCAACCCCGTCTCC 60.926 66.667 0.00 0.00 0.00 3.71
2262 2631 2.928396 CCACCAACCCCGTCTCCT 60.928 66.667 0.00 0.00 0.00 3.69
2263 2632 2.663196 CACCAACCCCGTCTCCTC 59.337 66.667 0.00 0.00 0.00 3.71
2264 2633 2.606826 ACCAACCCCGTCTCCTCC 60.607 66.667 0.00 0.00 0.00 4.30
2265 2634 3.771160 CCAACCCCGTCTCCTCCG 61.771 72.222 0.00 0.00 0.00 4.63
2266 2635 4.452733 CAACCCCGTCTCCTCCGC 62.453 72.222 0.00 0.00 0.00 5.54
2272 2641 3.382832 CGTCTCCTCCGCCACCTT 61.383 66.667 0.00 0.00 0.00 3.50
2273 2642 2.579738 GTCTCCTCCGCCACCTTC 59.420 66.667 0.00 0.00 0.00 3.46
2274 2643 2.119611 TCTCCTCCGCCACCTTCA 59.880 61.111 0.00 0.00 0.00 3.02
2275 2644 2.266055 CTCCTCCGCCACCTTCAC 59.734 66.667 0.00 0.00 0.00 3.18
2276 2645 3.316573 CTCCTCCGCCACCTTCACC 62.317 68.421 0.00 0.00 0.00 4.02
2277 2646 3.636231 CCTCCGCCACCTTCACCA 61.636 66.667 0.00 0.00 0.00 4.17
2278 2647 2.358737 CTCCGCCACCTTCACCAC 60.359 66.667 0.00 0.00 0.00 4.16
2279 2648 3.901797 CTCCGCCACCTTCACCACC 62.902 68.421 0.00 0.00 0.00 4.61
2302 2671 3.691342 CGTCGCCTCCTCCACCAA 61.691 66.667 0.00 0.00 0.00 3.67
2303 2672 2.047179 GTCGCCTCCTCCACCAAC 60.047 66.667 0.00 0.00 0.00 3.77
2304 2673 3.319198 TCGCCTCCTCCACCAACC 61.319 66.667 0.00 0.00 0.00 3.77
2305 2674 4.760047 CGCCTCCTCCACCAACCG 62.760 72.222 0.00 0.00 0.00 4.44
2307 2676 4.760047 CCTCCTCCACCAACCGCG 62.760 72.222 0.00 0.00 0.00 6.46
2308 2677 4.003788 CTCCTCCACCAACCGCGT 62.004 66.667 4.92 0.00 0.00 6.01
2309 2678 3.934391 CTCCTCCACCAACCGCGTC 62.934 68.421 4.92 0.00 0.00 5.19
2310 2679 4.003788 CCTCCACCAACCGCGTCT 62.004 66.667 4.92 0.00 0.00 4.18
2311 2680 2.432628 CTCCACCAACCGCGTCTC 60.433 66.667 4.92 0.00 0.00 3.36
2312 2681 3.934391 CTCCACCAACCGCGTCTCC 62.934 68.421 4.92 0.00 0.00 3.71
2313 2682 4.003788 CCACCAACCGCGTCTCCT 62.004 66.667 4.92 0.00 0.00 3.69
2314 2683 2.432628 CACCAACCGCGTCTCCTC 60.433 66.667 4.92 0.00 0.00 3.71
2315 2684 3.692406 ACCAACCGCGTCTCCTCC 61.692 66.667 4.92 0.00 0.00 4.30
2316 2685 3.691342 CCAACCGCGTCTCCTCCA 61.691 66.667 4.92 0.00 0.00 3.86
2317 2686 2.432628 CAACCGCGTCTCCTCCAC 60.433 66.667 4.92 0.00 0.00 4.02
2318 2687 3.692406 AACCGCGTCTCCTCCACC 61.692 66.667 4.92 0.00 0.00 4.61
2319 2688 4.988716 ACCGCGTCTCCTCCACCA 62.989 66.667 4.92 0.00 0.00 4.17
2320 2689 4.436998 CCGCGTCTCCTCCACCAC 62.437 72.222 4.92 0.00 0.00 4.16
2321 2690 4.436998 CGCGTCTCCTCCACCACC 62.437 72.222 0.00 0.00 0.00 4.61
2322 2691 2.997897 GCGTCTCCTCCACCACCT 60.998 66.667 0.00 0.00 0.00 4.00
2323 2692 2.584391 GCGTCTCCTCCACCACCTT 61.584 63.158 0.00 0.00 0.00 3.50
2324 2693 1.592223 CGTCTCCTCCACCACCTTC 59.408 63.158 0.00 0.00 0.00 3.46
2325 2694 1.185618 CGTCTCCTCCACCACCTTCA 61.186 60.000 0.00 0.00 0.00 3.02
2442 2826 3.752339 ACGCCTCCCCGTTACGAC 61.752 66.667 6.24 0.00 38.47 4.34
2547 2931 0.731417 CCTACTACGAGGTGTCACCG 59.269 60.000 16.44 8.15 44.90 4.94
2823 3207 5.416013 TGGTGAAACAATGCCGTTAATATCA 59.584 36.000 0.00 0.00 39.98 2.15
2932 3328 8.970859 AGATGGATTCGATAATGAGAAGTTTT 57.029 30.769 0.00 0.00 0.00 2.43
2947 3343 7.109501 TGAGAAGTTTTATCATTCGATTCCCA 58.890 34.615 0.00 0.00 32.73 4.37
3032 3428 5.724328 TCACTTGACTGGAATAACAGCTAG 58.276 41.667 0.00 0.00 42.21 3.42
3139 3539 1.191944 CACGATGAGACGGTCGATTG 58.808 55.000 1.89 5.81 40.11 2.67
3242 3642 1.321474 CCAGCTCAAGGTCAAGCAAA 58.679 50.000 0.00 0.00 41.06 3.68
3243 3643 1.891150 CCAGCTCAAGGTCAAGCAAAT 59.109 47.619 0.00 0.00 41.06 2.32
3245 3645 2.094854 CAGCTCAAGGTCAAGCAAATCC 60.095 50.000 0.00 0.00 41.06 3.01
3246 3646 2.165998 GCTCAAGGTCAAGCAAATCCT 58.834 47.619 0.00 0.00 38.42 3.24
3247 3647 2.560105 GCTCAAGGTCAAGCAAATCCTT 59.440 45.455 0.00 0.00 40.38 3.36
3279 3679 3.459965 AGCCGCTCAGCCTCTCTG 61.460 66.667 0.00 0.00 44.21 3.35
3281 3681 3.767806 CCGCTCAGCCTCTCTGCA 61.768 66.667 0.00 0.00 42.56 4.41
3282 3682 2.263852 CGCTCAGCCTCTCTGCAA 59.736 61.111 0.00 0.00 42.56 4.08
3285 3685 0.803740 GCTCAGCCTCTCTGCAAAAG 59.196 55.000 0.00 0.00 42.56 2.27
3286 3686 1.451067 CTCAGCCTCTCTGCAAAAGG 58.549 55.000 4.66 4.66 42.56 3.11
3391 3813 1.069500 GTCAACACCAACGTGCATACC 60.069 52.381 0.00 0.00 44.40 2.73
3437 3859 4.861102 GGGCGTACCTTAGCTTTATAGA 57.139 45.455 0.00 0.00 35.85 1.98
3438 3860 5.205759 GGGCGTACCTTAGCTTTATAGAA 57.794 43.478 0.00 0.00 35.85 2.10
3439 3861 5.604565 GGGCGTACCTTAGCTTTATAGAAA 58.395 41.667 0.00 0.00 35.85 2.52
3440 3862 6.051074 GGGCGTACCTTAGCTTTATAGAAAA 58.949 40.000 0.00 0.00 35.85 2.29
3441 3863 6.202379 GGGCGTACCTTAGCTTTATAGAAAAG 59.798 42.308 0.00 0.00 35.85 2.27
3442 3864 6.982724 GGCGTACCTTAGCTTTATAGAAAAGA 59.017 38.462 0.00 0.00 0.00 2.52
3443 3865 7.169476 GGCGTACCTTAGCTTTATAGAAAAGAG 59.831 40.741 0.00 0.00 0.00 2.85
3444 3866 7.919621 GCGTACCTTAGCTTTATAGAAAAGAGA 59.080 37.037 0.00 0.00 0.00 3.10
3445 3867 9.798994 CGTACCTTAGCTTTATAGAAAAGAGAA 57.201 33.333 0.00 0.00 0.00 2.87
3486 3908 9.982651 GATTATATTTGTGCTAGTTAGGAGTCA 57.017 33.333 0.00 0.00 0.00 3.41
3487 3909 9.765795 ATTATATTTGTGCTAGTTAGGAGTCAC 57.234 33.333 0.00 0.00 0.00 3.67
3488 3910 4.948341 TTTGTGCTAGTTAGGAGTCACA 57.052 40.909 0.00 0.00 32.70 3.58
3489 3911 4.948341 TTGTGCTAGTTAGGAGTCACAA 57.052 40.909 0.00 0.00 37.97 3.33
3490 3912 4.521130 TGTGCTAGTTAGGAGTCACAAG 57.479 45.455 0.00 0.00 32.08 3.16
3491 3913 3.254892 GTGCTAGTTAGGAGTCACAAGC 58.745 50.000 0.00 0.00 0.00 4.01
3492 3914 2.233922 TGCTAGTTAGGAGTCACAAGCC 59.766 50.000 0.00 0.00 0.00 4.35
3493 3915 2.735762 GCTAGTTAGGAGTCACAAGCCG 60.736 54.545 0.00 0.00 0.00 5.52
3494 3916 1.629043 AGTTAGGAGTCACAAGCCGA 58.371 50.000 0.00 0.00 0.00 5.54
3495 3917 1.272769 AGTTAGGAGTCACAAGCCGAC 59.727 52.381 0.00 0.00 0.00 4.79
3496 3918 0.606604 TTAGGAGTCACAAGCCGACC 59.393 55.000 0.00 0.00 33.70 4.79
3497 3919 1.255667 TAGGAGTCACAAGCCGACCC 61.256 60.000 0.00 0.00 33.70 4.46
3498 3920 2.584391 GGAGTCACAAGCCGACCCT 61.584 63.158 0.00 0.00 33.70 4.34
3499 3921 1.255667 GGAGTCACAAGCCGACCCTA 61.256 60.000 0.00 0.00 33.70 3.53
3500 3922 0.606604 GAGTCACAAGCCGACCCTAA 59.393 55.000 0.00 0.00 33.70 2.69
3501 3923 0.320697 AGTCACAAGCCGACCCTAAC 59.679 55.000 0.00 0.00 33.70 2.34
3502 3924 0.672711 GTCACAAGCCGACCCTAACC 60.673 60.000 0.00 0.00 0.00 2.85
3503 3925 1.122632 TCACAAGCCGACCCTAACCA 61.123 55.000 0.00 0.00 0.00 3.67
3504 3926 0.250553 CACAAGCCGACCCTAACCAA 60.251 55.000 0.00 0.00 0.00 3.67
3505 3927 0.036306 ACAAGCCGACCCTAACCAAG 59.964 55.000 0.00 0.00 0.00 3.61
3506 3928 1.002502 AAGCCGACCCTAACCAAGC 60.003 57.895 0.00 0.00 0.00 4.01
3507 3929 2.437895 GCCGACCCTAACCAAGCC 60.438 66.667 0.00 0.00 0.00 4.35
3508 3930 2.967946 GCCGACCCTAACCAAGCCT 61.968 63.158 0.00 0.00 0.00 4.58
3509 3931 1.221021 CCGACCCTAACCAAGCCTC 59.779 63.158 0.00 0.00 0.00 4.70
3510 3932 1.265454 CCGACCCTAACCAAGCCTCT 61.265 60.000 0.00 0.00 0.00 3.69
3511 3933 1.481871 CGACCCTAACCAAGCCTCTA 58.518 55.000 0.00 0.00 0.00 2.43
3512 3934 1.136500 CGACCCTAACCAAGCCTCTAC 59.864 57.143 0.00 0.00 0.00 2.59
3513 3935 1.485480 GACCCTAACCAAGCCTCTACC 59.515 57.143 0.00 0.00 0.00 3.18
3514 3936 0.837940 CCCTAACCAAGCCTCTACCC 59.162 60.000 0.00 0.00 0.00 3.69
3515 3937 0.837940 CCTAACCAAGCCTCTACCCC 59.162 60.000 0.00 0.00 0.00 4.95
3516 3938 1.580059 CTAACCAAGCCTCTACCCCA 58.420 55.000 0.00 0.00 0.00 4.96
3517 3939 1.209747 CTAACCAAGCCTCTACCCCAC 59.790 57.143 0.00 0.00 0.00 4.61
3518 3940 0.475828 AACCAAGCCTCTACCCCACT 60.476 55.000 0.00 0.00 0.00 4.00
3519 3941 0.910088 ACCAAGCCTCTACCCCACTC 60.910 60.000 0.00 0.00 0.00 3.51
3520 3942 1.627297 CCAAGCCTCTACCCCACTCC 61.627 65.000 0.00 0.00 0.00 3.85
3521 3943 0.618968 CAAGCCTCTACCCCACTCCT 60.619 60.000 0.00 0.00 0.00 3.69
3522 3944 1.016415 AAGCCTCTACCCCACTCCTA 58.984 55.000 0.00 0.00 0.00 2.94
3523 3945 0.262285 AGCCTCTACCCCACTCCTAC 59.738 60.000 0.00 0.00 0.00 3.18
3524 3946 0.032416 GCCTCTACCCCACTCCTACA 60.032 60.000 0.00 0.00 0.00 2.74
3525 3947 1.413227 GCCTCTACCCCACTCCTACAT 60.413 57.143 0.00 0.00 0.00 2.29
3526 3948 2.599677 CCTCTACCCCACTCCTACATC 58.400 57.143 0.00 0.00 0.00 3.06
3527 3949 2.091278 CCTCTACCCCACTCCTACATCA 60.091 54.545 0.00 0.00 0.00 3.07
3528 3950 3.438668 CCTCTACCCCACTCCTACATCAT 60.439 52.174 0.00 0.00 0.00 2.45
3529 3951 4.202684 CCTCTACCCCACTCCTACATCATA 60.203 50.000 0.00 0.00 0.00 2.15
3530 3952 4.737578 TCTACCCCACTCCTACATCATAC 58.262 47.826 0.00 0.00 0.00 2.39
3531 3953 3.708236 ACCCCACTCCTACATCATACT 57.292 47.619 0.00 0.00 0.00 2.12
3532 3954 3.577919 ACCCCACTCCTACATCATACTC 58.422 50.000 0.00 0.00 0.00 2.59
3533 3955 2.558795 CCCCACTCCTACATCATACTCG 59.441 54.545 0.00 0.00 0.00 4.18
3534 3956 3.487372 CCCACTCCTACATCATACTCGA 58.513 50.000 0.00 0.00 0.00 4.04
3535 3957 3.253677 CCCACTCCTACATCATACTCGAC 59.746 52.174 0.00 0.00 0.00 4.20
3536 3958 4.138290 CCACTCCTACATCATACTCGACT 58.862 47.826 0.00 0.00 0.00 4.18
3537 3959 5.306394 CCACTCCTACATCATACTCGACTA 58.694 45.833 0.00 0.00 0.00 2.59
3538 3960 5.179742 CCACTCCTACATCATACTCGACTAC 59.820 48.000 0.00 0.00 0.00 2.73
3539 3961 5.992829 CACTCCTACATCATACTCGACTACT 59.007 44.000 0.00 0.00 0.00 2.57
3540 3962 6.146510 CACTCCTACATCATACTCGACTACTC 59.853 46.154 0.00 0.00 0.00 2.59
3541 3963 5.228665 TCCTACATCATACTCGACTACTCG 58.771 45.833 0.00 0.00 41.65 4.18
3542 3964 4.389382 CCTACATCATACTCGACTACTCGG 59.611 50.000 0.00 0.00 40.58 4.63
3543 3965 3.139850 ACATCATACTCGACTACTCGGG 58.860 50.000 0.00 0.00 46.75 5.14
3544 3966 3.181457 ACATCATACTCGACTACTCGGGA 60.181 47.826 0.00 0.00 43.81 5.14
3545 3967 3.548745 TCATACTCGACTACTCGGGAA 57.451 47.619 0.00 0.00 43.81 3.97
3546 3968 3.201290 TCATACTCGACTACTCGGGAAC 58.799 50.000 0.00 0.00 43.81 3.62
3547 3969 3.118482 TCATACTCGACTACTCGGGAACT 60.118 47.826 0.00 0.00 43.81 3.01
3548 3970 4.100035 TCATACTCGACTACTCGGGAACTA 59.900 45.833 0.00 0.00 43.81 2.24
3549 3971 2.903798 ACTCGACTACTCGGGAACTAG 58.096 52.381 0.00 0.00 43.81 2.57
3550 3972 2.235898 ACTCGACTACTCGGGAACTAGT 59.764 50.000 0.00 0.00 43.81 2.57
3551 3973 3.269178 CTCGACTACTCGGGAACTAGTT 58.731 50.000 8.13 8.13 43.81 2.24
3552 3974 3.005554 TCGACTACTCGGGAACTAGTTG 58.994 50.000 14.14 0.12 40.58 3.16
3553 3975 2.746362 CGACTACTCGGGAACTAGTTGT 59.254 50.000 14.14 6.81 36.16 3.32
3554 3976 3.181512 CGACTACTCGGGAACTAGTTGTC 60.182 52.174 14.14 10.23 40.38 3.18
3555 3977 3.087781 ACTACTCGGGAACTAGTTGTCC 58.912 50.000 14.14 13.02 29.03 4.02
3556 3978 2.305858 ACTCGGGAACTAGTTGTCCT 57.694 50.000 14.14 0.00 0.00 3.85
3557 3979 2.169330 ACTCGGGAACTAGTTGTCCTC 58.831 52.381 14.14 0.00 0.00 3.71
3558 3980 1.477295 CTCGGGAACTAGTTGTCCTCC 59.523 57.143 14.14 7.46 0.00 4.30
3559 3981 1.203087 TCGGGAACTAGTTGTCCTCCA 60.203 52.381 14.14 0.00 29.30 3.86
3560 3982 1.621814 CGGGAACTAGTTGTCCTCCAA 59.378 52.381 14.14 0.00 29.30 3.53
3561 3983 2.038033 CGGGAACTAGTTGTCCTCCAAA 59.962 50.000 14.14 0.00 34.07 3.28
3562 3984 3.409570 GGGAACTAGTTGTCCTCCAAAC 58.590 50.000 14.14 0.00 34.07 2.93
3563 3985 3.064931 GGAACTAGTTGTCCTCCAAACG 58.935 50.000 14.14 0.00 34.07 3.60
3564 3986 2.165319 ACTAGTTGTCCTCCAAACGC 57.835 50.000 0.00 0.00 34.07 4.84
3565 3987 1.692519 ACTAGTTGTCCTCCAAACGCT 59.307 47.619 0.00 0.00 34.07 5.07
3566 3988 2.288886 ACTAGTTGTCCTCCAAACGCTC 60.289 50.000 0.00 0.00 34.07 5.03
3567 3989 0.250338 AGTTGTCCTCCAAACGCTCC 60.250 55.000 0.00 0.00 34.07 4.70
3568 3990 0.250338 GTTGTCCTCCAAACGCTCCT 60.250 55.000 0.00 0.00 34.07 3.69
3569 3991 0.250295 TTGTCCTCCAAACGCTCCTG 60.250 55.000 0.00 0.00 0.00 3.86
3570 3992 2.035442 GTCCTCCAAACGCTCCTGC 61.035 63.158 0.00 0.00 0.00 4.85
3571 3993 2.747855 CCTCCAAACGCTCCTGCC 60.748 66.667 0.00 0.00 35.36 4.85
3572 3994 3.121030 CTCCAAACGCTCCTGCCG 61.121 66.667 0.00 0.00 35.36 5.69
3573 3995 3.883744 CTCCAAACGCTCCTGCCGT 62.884 63.158 0.00 0.00 35.36 5.68
3574 3996 3.726517 CCAAACGCTCCTGCCGTG 61.727 66.667 0.00 0.00 35.36 4.94
3575 3997 3.726517 CAAACGCTCCTGCCGTGG 61.727 66.667 0.00 0.00 35.36 4.94
3641 4063 5.997385 GGTACCACTAACAAGTTGAATGTG 58.003 41.667 10.54 13.39 0.00 3.21
3642 4064 5.529800 GGTACCACTAACAAGTTGAATGTGT 59.470 40.000 10.54 2.33 0.00 3.72
3643 4065 5.499139 ACCACTAACAAGTTGAATGTGTG 57.501 39.130 10.54 10.22 0.00 3.82
3644 4066 4.202010 ACCACTAACAAGTTGAATGTGTGC 60.202 41.667 10.54 0.00 0.00 4.57
3645 4067 4.202000 CCACTAACAAGTTGAATGTGTGCA 60.202 41.667 10.54 0.00 0.00 4.57
3646 4068 5.507817 CCACTAACAAGTTGAATGTGTGCAT 60.508 40.000 10.54 0.00 36.80 3.96
3647 4069 5.978919 CACTAACAAGTTGAATGTGTGCATT 59.021 36.000 10.54 0.00 46.99 3.56
3648 4070 5.978919 ACTAACAAGTTGAATGTGTGCATTG 59.021 36.000 10.54 0.00 44.61 2.82
3649 4071 3.125316 ACAAGTTGAATGTGTGCATTGC 58.875 40.909 10.54 0.46 44.61 3.56
3650 4072 3.124560 CAAGTTGAATGTGTGCATTGCA 58.875 40.909 7.38 7.38 44.61 4.08
3660 4082 3.331002 TGCATTGCACGTAGGGAAA 57.669 47.368 7.38 0.00 31.71 3.13
3661 4083 0.878416 TGCATTGCACGTAGGGAAAC 59.122 50.000 7.38 0.00 31.71 2.78
3668 4090 0.799534 CACGTAGGGAAACGGCTACG 60.800 60.000 1.57 1.57 46.98 3.51
3669 4091 1.226773 CGTAGGGAAACGGCTACGG 60.227 63.158 0.00 0.00 46.48 4.02
3670 4092 1.893062 GTAGGGAAACGGCTACGGT 59.107 57.895 0.00 0.00 45.80 4.83
3677 4099 2.269978 AACGGCTACGGTTAGAGCA 58.730 52.632 4.00 0.00 46.48 4.26
3678 4100 0.604578 AACGGCTACGGTTAGAGCAA 59.395 50.000 4.00 0.00 46.48 3.91
3679 4101 0.108945 ACGGCTACGGTTAGAGCAAC 60.109 55.000 4.00 0.00 46.48 4.17
3680 4102 0.172803 CGGCTACGGTTAGAGCAACT 59.827 55.000 4.00 0.00 40.64 3.16
3681 4103 1.798079 CGGCTACGGTTAGAGCAACTC 60.798 57.143 4.00 0.00 40.64 3.01
3682 4104 1.471153 GGCTACGGTTAGAGCAACTCC 60.471 57.143 4.00 0.00 40.64 3.85
3683 4105 1.203994 GCTACGGTTAGAGCAACTCCA 59.796 52.381 0.00 0.00 38.62 3.86
3684 4106 2.353406 GCTACGGTTAGAGCAACTCCAA 60.353 50.000 0.00 0.00 38.62 3.53
3685 4107 2.165319 ACGGTTAGAGCAACTCCAAC 57.835 50.000 0.00 0.00 37.30 3.77
3686 4108 1.068474 CGGTTAGAGCAACTCCAACG 58.932 55.000 0.91 0.00 34.00 4.10
3687 4109 1.439679 GGTTAGAGCAACTCCAACGG 58.560 55.000 0.91 0.00 34.00 4.44
3688 4110 1.439679 GTTAGAGCAACTCCAACGGG 58.560 55.000 0.00 0.00 34.06 5.28
3689 4111 0.321298 TTAGAGCAACTCCAACGGGC 60.321 55.000 0.00 0.00 0.00 6.13
3690 4112 2.180159 TAGAGCAACTCCAACGGGCC 62.180 60.000 0.00 0.00 0.00 5.80
3693 4115 3.047877 CAACTCCAACGGGCCGAC 61.048 66.667 35.78 0.00 0.00 4.79
3694 4116 4.324991 AACTCCAACGGGCCGACC 62.325 66.667 35.78 0.00 0.00 4.79
3707 4129 2.650196 CGACCCAAACGGACGGTA 59.350 61.111 0.00 0.00 44.72 4.02
3708 4130 1.006337 CGACCCAAACGGACGGTAA 60.006 57.895 0.00 0.00 44.72 2.85
3709 4131 0.390209 CGACCCAAACGGACGGTAAT 60.390 55.000 0.00 0.00 44.72 1.89
3710 4132 1.812235 GACCCAAACGGACGGTAATT 58.188 50.000 0.00 0.00 34.64 1.40
3711 4133 2.153645 GACCCAAACGGACGGTAATTT 58.846 47.619 0.00 0.00 34.64 1.82
3712 4134 2.153645 ACCCAAACGGACGGTAATTTC 58.846 47.619 0.00 0.00 34.64 2.17
3713 4135 1.129064 CCCAAACGGACGGTAATTTCG 59.871 52.381 0.00 0.00 0.00 3.46
3714 4136 1.799994 CCAAACGGACGGTAATTTCGT 59.200 47.619 6.29 6.29 44.03 3.85
3720 4142 3.520187 ACGGTAATTTCGTCCGCTT 57.480 47.368 2.72 0.00 46.92 4.68
3721 4143 1.073177 ACGGTAATTTCGTCCGCTTG 58.927 50.000 2.72 0.00 46.92 4.01
3722 4144 0.372334 CGGTAATTTCGTCCGCTTGG 59.628 55.000 0.00 0.00 37.90 3.61
3723 4145 0.730840 GGTAATTTCGTCCGCTTGGG 59.269 55.000 0.00 0.00 37.02 4.12
3724 4146 1.445871 GTAATTTCGTCCGCTTGGGT 58.554 50.000 0.00 0.00 37.00 4.51
3725 4147 1.395954 GTAATTTCGTCCGCTTGGGTC 59.604 52.381 0.00 0.00 37.00 4.46
3726 4148 1.296056 AATTTCGTCCGCTTGGGTCG 61.296 55.000 0.00 0.00 46.78 4.79
3727 4149 3.869473 TTTCGTCCGCTTGGGTCGG 62.869 63.158 0.00 0.00 45.67 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 0.747255 CCATTCCACTCCGACGAGAT 59.253 55.000 0.00 0.00 38.52 2.75
115 116 1.940758 CTGTTGTGCTGCGTTGTGC 60.941 57.895 0.00 0.00 46.70 4.57
165 167 0.665835 CTGCGCTCCCTAGTAGACAG 59.334 60.000 9.73 0.00 0.00 3.51
167 169 1.104577 AGCTGCGCTCCCTAGTAGAC 61.105 60.000 9.73 0.00 30.62 2.59
202 208 7.145985 GTGAGCAGAAGTTATATCACCGATAA 58.854 38.462 4.46 0.00 32.78 1.75
204 210 5.509840 GGTGAGCAGAAGTTATATCACCGAT 60.510 44.000 14.75 0.00 45.04 4.18
205 211 4.202121 GGTGAGCAGAAGTTATATCACCGA 60.202 45.833 14.75 0.00 45.04 4.69
209 215 4.962362 TCAGGGTGAGCAGAAGTTATATCA 59.038 41.667 0.00 0.00 0.00 2.15
210 216 5.537300 TCAGGGTGAGCAGAAGTTATATC 57.463 43.478 0.00 0.00 0.00 1.63
211 217 7.618019 TTATCAGGGTGAGCAGAAGTTATAT 57.382 36.000 0.00 0.00 0.00 0.86
212 218 7.618019 ATTATCAGGGTGAGCAGAAGTTATA 57.382 36.000 0.00 0.00 0.00 0.98
217 223 7.040823 GGAATAAATTATCAGGGTGAGCAGAAG 60.041 40.741 0.00 0.00 0.00 2.85
222 228 5.635120 AGGGAATAAATTATCAGGGTGAGC 58.365 41.667 0.00 0.00 0.00 4.26
276 282 2.736682 CGGGTCATCAACGAACGGC 61.737 63.158 0.00 0.00 0.00 5.68
305 311 7.924103 TTGGCTTTTCTTTTTACGATTCTTC 57.076 32.000 0.00 0.00 0.00 2.87
335 348 6.499234 TGATTGATGACCAATGTTGTACAG 57.501 37.500 0.00 0.00 45.00 2.74
336 349 6.658391 TGATGATTGATGACCAATGTTGTACA 59.342 34.615 0.00 0.00 45.00 2.90
337 350 7.066163 TCTGATGATTGATGACCAATGTTGTAC 59.934 37.037 0.00 0.00 45.00 2.90
338 351 7.111466 TCTGATGATTGATGACCAATGTTGTA 58.889 34.615 0.00 0.00 45.00 2.41
339 352 5.947566 TCTGATGATTGATGACCAATGTTGT 59.052 36.000 0.00 0.00 45.00 3.32
409 422 1.817099 GATCAACCGGCAGCTGGAG 60.817 63.158 28.29 18.04 33.36 3.86
497 519 0.667993 ATAATGGCGCGTTGATTGGG 59.332 50.000 8.43 0.00 0.00 4.12
505 527 2.423577 GGGAATAGAATAATGGCGCGT 58.576 47.619 8.43 0.00 0.00 6.01
544 566 0.111253 GTTCATATGGGGGAGCAGGG 59.889 60.000 2.13 0.00 0.00 4.45
636 993 2.562912 GCCATTGCCGTCTGTGTG 59.437 61.111 0.00 0.00 0.00 3.82
661 1018 2.103934 CAGCGCGAGGAAGAGGAG 59.896 66.667 12.10 0.00 0.00 3.69
662 1019 4.135153 GCAGCGCGAGGAAGAGGA 62.135 66.667 12.10 0.00 0.00 3.71
663 1020 4.140599 AGCAGCGCGAGGAAGAGG 62.141 66.667 12.10 0.00 0.00 3.69
664 1021 2.581953 GAGCAGCGCGAGGAAGAG 60.582 66.667 12.10 0.00 0.00 2.85
665 1022 4.135153 GGAGCAGCGCGAGGAAGA 62.135 66.667 12.10 0.00 0.00 2.87
666 1023 4.140599 AGGAGCAGCGCGAGGAAG 62.141 66.667 12.10 0.00 0.00 3.46
667 1024 4.135153 GAGGAGCAGCGCGAGGAA 62.135 66.667 12.10 0.00 0.00 3.36
734 1091 0.390603 TCGGGTCGTTTGATCGCATT 60.391 50.000 0.00 0.00 0.00 3.56
735 1092 1.082117 GTCGGGTCGTTTGATCGCAT 61.082 55.000 0.00 0.00 0.00 4.73
736 1093 1.735198 GTCGGGTCGTTTGATCGCA 60.735 57.895 0.00 0.00 0.00 5.10
737 1094 2.785105 CGTCGGGTCGTTTGATCGC 61.785 63.158 0.00 0.00 0.00 4.58
738 1095 1.154169 TCGTCGGGTCGTTTGATCG 60.154 57.895 0.00 0.00 0.00 3.69
739 1096 1.400990 CGTCGTCGGGTCGTTTGATC 61.401 60.000 0.00 0.00 0.00 2.92
740 1097 1.443194 CGTCGTCGGGTCGTTTGAT 60.443 57.895 0.00 0.00 0.00 2.57
741 1098 2.051076 CGTCGTCGGGTCGTTTGA 60.051 61.111 0.00 0.00 0.00 2.69
742 1099 1.945662 AACGTCGTCGGGTCGTTTG 60.946 57.895 7.05 0.00 43.56 2.93
743 1100 1.945662 CAACGTCGTCGGGTCGTTT 60.946 57.895 16.24 5.07 44.08 3.60
744 1101 2.353839 CAACGTCGTCGGGTCGTT 60.354 61.111 7.05 14.23 46.22 3.85
745 1102 3.585990 ACAACGTCGTCGGGTCGT 61.586 61.111 7.05 0.00 41.85 4.34
746 1103 3.095278 CACAACGTCGTCGGGTCG 61.095 66.667 7.05 0.00 41.85 4.79
747 1104 2.682256 TTCCACAACGTCGTCGGGTC 62.682 60.000 7.05 0.00 41.85 4.46
748 1105 2.688526 CTTCCACAACGTCGTCGGGT 62.689 60.000 7.05 1.45 41.85 5.28
749 1106 2.019951 CTTCCACAACGTCGTCGGG 61.020 63.158 7.05 0.66 41.85 5.14
750 1107 2.019951 CCTTCCACAACGTCGTCGG 61.020 63.158 7.05 0.00 41.85 4.79
751 1108 2.654912 GCCTTCCACAACGTCGTCG 61.655 63.158 0.00 0.00 43.34 5.12
752 1109 1.557443 CTGCCTTCCACAACGTCGTC 61.557 60.000 0.00 0.00 0.00 4.20
753 1110 1.594293 CTGCCTTCCACAACGTCGT 60.594 57.895 0.00 0.00 0.00 4.34
754 1111 2.954753 GCTGCCTTCCACAACGTCG 61.955 63.158 0.00 0.00 0.00 5.12
755 1112 1.569479 GAGCTGCCTTCCACAACGTC 61.569 60.000 0.00 0.00 0.00 4.34
756 1113 1.598130 GAGCTGCCTTCCACAACGT 60.598 57.895 0.00 0.00 0.00 3.99
757 1114 2.328099 GGAGCTGCCTTCCACAACG 61.328 63.158 0.00 0.00 34.74 4.10
758 1115 3.673599 GGAGCTGCCTTCCACAAC 58.326 61.111 0.00 0.00 34.74 3.32
767 1124 4.173924 GCTGGAGGAGGAGCTGCC 62.174 72.222 0.00 0.00 32.12 4.85
768 1125 3.082701 AGCTGGAGGAGGAGCTGC 61.083 66.667 0.00 0.00 44.03 5.25
770 1127 3.082701 GCAGCTGGAGGAGGAGCT 61.083 66.667 17.12 0.00 46.73 4.09
771 1128 4.173924 GGCAGCTGGAGGAGGAGC 62.174 72.222 17.12 0.00 35.28 4.70
772 1129 3.847602 CGGCAGCTGGAGGAGGAG 61.848 72.222 17.12 0.00 0.00 3.69
775 1132 3.710722 AACCGGCAGCTGGAGGAG 61.711 66.667 28.29 0.00 33.36 3.69
776 1133 4.020617 CAACCGGCAGCTGGAGGA 62.021 66.667 28.29 0.00 33.36 3.71
777 1134 3.335356 ATCAACCGGCAGCTGGAGG 62.335 63.158 28.29 17.37 33.36 4.30
778 1135 1.817099 GATCAACCGGCAGCTGGAG 60.817 63.158 28.29 18.04 33.36 3.86
779 1136 2.268920 GATCAACCGGCAGCTGGA 59.731 61.111 28.29 4.71 33.36 3.86
780 1137 2.825836 GGATCAACCGGCAGCTGG 60.826 66.667 19.77 19.77 35.68 4.85
798 1155 2.045926 ATGGACCAACGCTCCAGC 60.046 61.111 0.00 0.00 41.24 4.85
799 1156 1.021390 GTGATGGACCAACGCTCCAG 61.021 60.000 7.99 0.00 41.24 3.86
800 1157 1.003839 GTGATGGACCAACGCTCCA 60.004 57.895 7.99 0.00 42.17 3.86
801 1158 2.100631 CGTGATGGACCAACGCTCC 61.101 63.158 12.82 0.00 0.00 4.70
802 1159 2.740714 GCGTGATGGACCAACGCTC 61.741 63.158 28.32 12.14 45.01 5.03
803 1160 2.742372 GCGTGATGGACCAACGCT 60.742 61.111 28.32 0.56 45.01 5.07
804 1161 4.147322 CGCGTGATGGACCAACGC 62.147 66.667 26.65 26.65 44.99 4.84
805 1162 4.147322 GCGCGTGATGGACCAACG 62.147 66.667 13.32 13.32 0.00 4.10
806 1163 3.047280 TGCGCGTGATGGACCAAC 61.047 61.111 8.43 0.00 0.00 3.77
807 1164 3.047280 GTGCGCGTGATGGACCAA 61.047 61.111 8.43 0.00 0.00 3.67
808 1165 4.306967 TGTGCGCGTGATGGACCA 62.307 61.111 8.43 0.00 0.00 4.02
809 1166 3.788766 GTGTGCGCGTGATGGACC 61.789 66.667 8.43 0.00 0.00 4.46
810 1167 4.134187 CGTGTGCGCGTGATGGAC 62.134 66.667 8.43 0.00 0.00 4.02
821 1178 1.145162 CTTTGGTTGGTTGCGTGTGC 61.145 55.000 0.00 0.00 43.20 4.57
822 1179 1.145162 GCTTTGGTTGGTTGCGTGTG 61.145 55.000 0.00 0.00 0.00 3.82
823 1180 1.140804 GCTTTGGTTGGTTGCGTGT 59.859 52.632 0.00 0.00 0.00 4.49
824 1181 1.591327 GGCTTTGGTTGGTTGCGTG 60.591 57.895 0.00 0.00 0.00 5.34
825 1182 1.398958 ATGGCTTTGGTTGGTTGCGT 61.399 50.000 0.00 0.00 0.00 5.24
826 1183 0.667184 GATGGCTTTGGTTGGTTGCG 60.667 55.000 0.00 0.00 0.00 4.85
827 1184 0.320683 GGATGGCTTTGGTTGGTTGC 60.321 55.000 0.00 0.00 0.00 4.17
828 1185 0.321346 GGGATGGCTTTGGTTGGTTG 59.679 55.000 0.00 0.00 0.00 3.77
829 1186 1.184970 CGGGATGGCTTTGGTTGGTT 61.185 55.000 0.00 0.00 0.00 3.67
830 1187 1.606313 CGGGATGGCTTTGGTTGGT 60.606 57.895 0.00 0.00 0.00 3.67
831 1188 3.005540 GCGGGATGGCTTTGGTTGG 62.006 63.158 0.00 0.00 0.00 3.77
832 1189 2.573340 GCGGGATGGCTTTGGTTG 59.427 61.111 0.00 0.00 0.00 3.77
833 1190 2.837031 ATCGCGGGATGGCTTTGGTT 62.837 55.000 14.93 0.00 0.00 3.67
834 1191 3.344137 ATCGCGGGATGGCTTTGGT 62.344 57.895 14.93 0.00 0.00 3.67
835 1192 2.516930 ATCGCGGGATGGCTTTGG 60.517 61.111 14.93 0.00 0.00 3.28
836 1193 2.885676 CGATCGCGGGATGGCTTTG 61.886 63.158 20.80 0.00 31.51 2.77
837 1194 2.588877 CGATCGCGGGATGGCTTT 60.589 61.111 20.80 0.00 31.51 3.51
858 1215 3.131478 GTTGATTGGGCCGGACGG 61.131 66.667 5.05 6.35 38.57 4.79
859 1216 3.496131 CGTTGATTGGGCCGGACG 61.496 66.667 5.05 0.00 0.00 4.79
860 1217 3.810896 GCGTTGATTGGGCCGGAC 61.811 66.667 5.05 0.00 0.00 4.79
865 1222 1.999071 TAATGGCGCGTTGATTGGGC 61.999 55.000 8.43 0.00 43.79 5.36
866 1223 0.667993 ATAATGGCGCGTTGATTGGG 59.332 50.000 8.43 0.00 0.00 4.12
867 1224 2.033299 AGAATAATGGCGCGTTGATTGG 59.967 45.455 8.43 0.00 0.00 3.16
868 1225 3.338818 AGAATAATGGCGCGTTGATTG 57.661 42.857 8.43 0.00 0.00 2.67
869 1226 5.334879 GGAATAGAATAATGGCGCGTTGATT 60.335 40.000 8.43 6.30 0.00 2.57
870 1227 4.154195 GGAATAGAATAATGGCGCGTTGAT 59.846 41.667 8.43 0.00 0.00 2.57
871 1228 3.496884 GGAATAGAATAATGGCGCGTTGA 59.503 43.478 8.43 0.00 0.00 3.18
872 1229 3.364964 GGGAATAGAATAATGGCGCGTTG 60.365 47.826 8.43 0.00 0.00 4.10
873 1230 2.812011 GGGAATAGAATAATGGCGCGTT 59.188 45.455 8.43 0.93 0.00 4.84
874 1231 2.423577 GGGAATAGAATAATGGCGCGT 58.576 47.619 8.43 0.00 0.00 6.01
875 1232 1.393539 CGGGAATAGAATAATGGCGCG 59.606 52.381 0.00 0.00 0.00 6.86
876 1233 1.130561 GCGGGAATAGAATAATGGCGC 59.869 52.381 0.00 0.00 0.00 6.53
877 1234 1.393539 CGCGGGAATAGAATAATGGCG 59.606 52.381 0.00 0.00 34.99 5.69
878 1235 1.130561 GCGCGGGAATAGAATAATGGC 59.869 52.381 8.83 0.00 0.00 4.40
879 1236 1.737793 GGCGCGGGAATAGAATAATGG 59.262 52.381 8.83 0.00 0.00 3.16
880 1237 1.393539 CGGCGCGGGAATAGAATAATG 59.606 52.381 8.83 0.00 0.00 1.90
881 1238 1.722011 CGGCGCGGGAATAGAATAAT 58.278 50.000 8.83 0.00 0.00 1.28
882 1239 0.947180 GCGGCGCGGGAATAGAATAA 60.947 55.000 19.09 0.00 0.00 1.40
883 1240 1.373748 GCGGCGCGGGAATAGAATA 60.374 57.895 19.09 0.00 0.00 1.75
884 1241 2.665185 GCGGCGCGGGAATAGAAT 60.665 61.111 19.09 0.00 0.00 2.40
899 1256 4.489771 AGGGGAGGCCAAATCGCG 62.490 66.667 5.01 0.00 0.00 5.87
900 1257 2.830370 CAGGGGAGGCCAAATCGC 60.830 66.667 5.01 1.57 0.00 4.58
901 1258 2.830370 GCAGGGGAGGCCAAATCG 60.830 66.667 5.01 0.00 0.00 3.34
902 1259 1.454663 GAGCAGGGGAGGCCAAATC 60.455 63.158 5.01 0.00 0.00 2.17
903 1260 2.685999 GAGCAGGGGAGGCCAAAT 59.314 61.111 5.01 0.00 0.00 2.32
904 1261 3.661648 GGAGCAGGGGAGGCCAAA 61.662 66.667 5.01 0.00 0.00 3.28
921 1278 2.391972 GGGGTGGGTTCATAGGGGG 61.392 68.421 0.00 0.00 0.00 5.40
922 1279 2.391972 GGGGGTGGGTTCATAGGGG 61.392 68.421 0.00 0.00 0.00 4.79
923 1280 3.342387 GGGGGTGGGTTCATAGGG 58.658 66.667 0.00 0.00 0.00 3.53
939 1296 1.380380 GCTCATGGGTTTGAGGGGG 60.380 63.158 0.00 0.00 42.78 5.40
940 1297 0.032813 ATGCTCATGGGTTTGAGGGG 60.033 55.000 0.00 0.00 42.78 4.79
941 1298 1.396653 GATGCTCATGGGTTTGAGGG 58.603 55.000 0.00 0.00 42.78 4.30
942 1299 1.341285 TGGATGCTCATGGGTTTGAGG 60.341 52.381 0.00 0.00 42.78 3.86
943 1300 2.133281 TGGATGCTCATGGGTTTGAG 57.867 50.000 0.00 0.00 44.87 3.02
944 1301 2.658285 GATGGATGCTCATGGGTTTGA 58.342 47.619 0.00 0.00 0.00 2.69
945 1302 1.684983 GGATGGATGCTCATGGGTTTG 59.315 52.381 0.00 0.00 0.00 2.93
946 1303 1.288633 TGGATGGATGCTCATGGGTTT 59.711 47.619 0.00 0.00 0.00 3.27
947 1304 0.928505 TGGATGGATGCTCATGGGTT 59.071 50.000 0.00 0.00 0.00 4.11
948 1305 0.184451 GTGGATGGATGCTCATGGGT 59.816 55.000 0.00 0.00 0.00 4.51
949 1306 0.887836 CGTGGATGGATGCTCATGGG 60.888 60.000 0.00 0.00 0.00 4.00
950 1307 1.512996 GCGTGGATGGATGCTCATGG 61.513 60.000 0.00 0.00 0.00 3.66
951 1308 1.512996 GGCGTGGATGGATGCTCATG 61.513 60.000 0.00 0.00 0.00 3.07
952 1309 1.228063 GGCGTGGATGGATGCTCAT 60.228 57.895 0.00 0.00 0.00 2.90
953 1310 2.190313 GGCGTGGATGGATGCTCA 59.810 61.111 0.00 0.00 0.00 4.26
954 1311 2.182842 GTGGCGTGGATGGATGCTC 61.183 63.158 0.00 0.00 0.00 4.26
955 1312 2.124570 GTGGCGTGGATGGATGCT 60.125 61.111 0.00 0.00 0.00 3.79
956 1313 2.438254 TGTGGCGTGGATGGATGC 60.438 61.111 0.00 0.00 0.00 3.91
957 1314 2.114670 GGTGTGGCGTGGATGGATG 61.115 63.158 0.00 0.00 0.00 3.51
958 1315 2.272146 GGTGTGGCGTGGATGGAT 59.728 61.111 0.00 0.00 0.00 3.41
959 1316 3.245346 TGGTGTGGCGTGGATGGA 61.245 61.111 0.00 0.00 0.00 3.41
960 1317 3.055719 GTGGTGTGGCGTGGATGG 61.056 66.667 0.00 0.00 0.00 3.51
961 1318 2.281414 TGTGGTGTGGCGTGGATG 60.281 61.111 0.00 0.00 0.00 3.51
962 1319 2.281484 GTGTGGTGTGGCGTGGAT 60.281 61.111 0.00 0.00 0.00 3.41
963 1320 3.787001 TGTGTGGTGTGGCGTGGA 61.787 61.111 0.00 0.00 0.00 4.02
964 1321 3.582120 GTGTGTGGTGTGGCGTGG 61.582 66.667 0.00 0.00 0.00 4.94
965 1322 2.821810 TGTGTGTGGTGTGGCGTG 60.822 61.111 0.00 0.00 0.00 5.34
966 1323 2.513666 CTGTGTGTGGTGTGGCGT 60.514 61.111 0.00 0.00 0.00 5.68
967 1324 3.952675 GCTGTGTGTGGTGTGGCG 61.953 66.667 0.00 0.00 0.00 5.69
968 1325 3.595758 GGCTGTGTGTGGTGTGGC 61.596 66.667 0.00 0.00 0.00 5.01
969 1326 2.906897 GGGCTGTGTGTGGTGTGG 60.907 66.667 0.00 0.00 0.00 4.17
970 1327 3.279116 CGGGCTGTGTGTGGTGTG 61.279 66.667 0.00 0.00 0.00 3.82
992 1349 3.508840 GTGTGCGCATGGTAGCCC 61.509 66.667 15.91 0.00 0.00 5.19
993 1350 2.745884 TGTGTGCGCATGGTAGCC 60.746 61.111 15.91 0.00 0.00 3.93
994 1351 1.741401 TCTGTGTGCGCATGGTAGC 60.741 57.895 15.91 0.00 0.00 3.58
995 1352 1.686566 CGTCTGTGTGCGCATGGTAG 61.687 60.000 15.91 10.44 0.00 3.18
996 1353 1.736282 CGTCTGTGTGCGCATGGTA 60.736 57.895 15.91 0.00 0.00 3.25
997 1354 3.043713 CGTCTGTGTGCGCATGGT 61.044 61.111 15.91 0.00 0.00 3.55
998 1355 3.792047 CCGTCTGTGTGCGCATGG 61.792 66.667 15.91 0.00 0.00 3.66
999 1356 4.450122 GCCGTCTGTGTGCGCATG 62.450 66.667 15.91 4.74 0.00 4.06
1000 1357 4.986645 TGCCGTCTGTGTGCGCAT 62.987 61.111 15.91 0.00 0.00 4.73
1002 1359 3.726517 ATTGCCGTCTGTGTGCGC 61.727 61.111 0.00 0.00 0.00 6.09
1003 1360 2.174107 CATTGCCGTCTGTGTGCG 59.826 61.111 0.00 0.00 0.00 5.34
1004 1361 2.562912 CCATTGCCGTCTGTGTGC 59.437 61.111 0.00 0.00 0.00 4.57
1005 1362 2.562912 GCCATTGCCGTCTGTGTG 59.437 61.111 0.00 0.00 0.00 3.82
1006 1363 3.049674 CGCCATTGCCGTCTGTGT 61.050 61.111 0.00 0.00 0.00 3.72
1007 1364 2.741985 TCGCCATTGCCGTCTGTG 60.742 61.111 0.00 0.00 0.00 3.66
1008 1365 2.742372 GTCGCCATTGCCGTCTGT 60.742 61.111 0.00 0.00 0.00 3.41
1009 1366 3.499737 GGTCGCCATTGCCGTCTG 61.500 66.667 0.00 0.00 0.00 3.51
1010 1367 4.015406 TGGTCGCCATTGCCGTCT 62.015 61.111 0.00 0.00 0.00 4.18
1011 1368 3.799755 GTGGTCGCCATTGCCGTC 61.800 66.667 1.90 0.00 35.28 4.79
1014 1371 4.740822 AGGGTGGTCGCCATTGCC 62.741 66.667 2.81 0.00 35.28 4.52
1015 1372 3.134127 GAGGGTGGTCGCCATTGC 61.134 66.667 2.81 0.00 35.28 3.56
1016 1373 2.438434 GGAGGGTGGTCGCCATTG 60.438 66.667 2.81 0.00 35.28 2.82
1017 1374 2.610859 AGGAGGGTGGTCGCCATT 60.611 61.111 2.81 0.00 35.28 3.16
1018 1375 3.083997 GAGGAGGGTGGTCGCCAT 61.084 66.667 2.81 0.00 35.28 4.40
1019 1376 3.846405 AAGAGGAGGGTGGTCGCCA 62.846 63.158 2.81 0.00 0.00 5.69
1020 1377 3.003763 AAGAGGAGGGTGGTCGCC 61.004 66.667 0.00 0.00 0.00 5.54
1021 1378 2.579738 GAAGAGGAGGGTGGTCGC 59.420 66.667 0.00 0.00 0.00 5.19
1022 1379 1.305381 AGGAAGAGGAGGGTGGTCG 60.305 63.158 0.00 0.00 0.00 4.79
1023 1380 1.324005 CGAGGAAGAGGAGGGTGGTC 61.324 65.000 0.00 0.00 0.00 4.02
1024 1381 1.305381 CGAGGAAGAGGAGGGTGGT 60.305 63.158 0.00 0.00 0.00 4.16
1025 1382 2.726351 GCGAGGAAGAGGAGGGTGG 61.726 68.421 0.00 0.00 0.00 4.61
1026 1383 2.896443 GCGAGGAAGAGGAGGGTG 59.104 66.667 0.00 0.00 0.00 4.61
1027 1384 2.756283 CGCGAGGAAGAGGAGGGT 60.756 66.667 0.00 0.00 0.00 4.34
1028 1385 4.214327 GCGCGAGGAAGAGGAGGG 62.214 72.222 12.10 0.00 0.00 4.30
2088 2457 2.035066 GCTGTTGAAGAATTGGCACTGT 59.965 45.455 0.00 0.00 0.00 3.55
2121 2490 3.023591 GCACCTAAAGGCGTCGCAC 62.024 63.158 20.50 8.57 39.32 5.34
2133 2502 2.869801 CAACACGAACTTCTTGCACCTA 59.130 45.455 0.00 0.00 0.00 3.08
2214 2583 2.112297 GGCGGTGGTGAAGGTGAA 59.888 61.111 0.00 0.00 0.00 3.18
2215 2584 4.308458 CGGCGGTGGTGAAGGTGA 62.308 66.667 0.00 0.00 0.00 4.02
2260 2629 3.636231 TGGTGAAGGTGGCGGAGG 61.636 66.667 0.00 0.00 0.00 4.30
2261 2630 2.358737 GTGGTGAAGGTGGCGGAG 60.359 66.667 0.00 0.00 0.00 4.63
2262 2631 3.948719 GGTGGTGAAGGTGGCGGA 61.949 66.667 0.00 0.00 0.00 5.54
2285 2654 3.691342 TTGGTGGAGGAGGCGACG 61.691 66.667 0.00 0.00 0.00 5.12
2286 2655 2.047179 GTTGGTGGAGGAGGCGAC 60.047 66.667 0.00 0.00 0.00 5.19
2287 2656 3.319198 GGTTGGTGGAGGAGGCGA 61.319 66.667 0.00 0.00 0.00 5.54
2288 2657 4.760047 CGGTTGGTGGAGGAGGCG 62.760 72.222 0.00 0.00 0.00 5.52
2290 2659 4.760047 CGCGGTTGGTGGAGGAGG 62.760 72.222 0.00 0.00 0.00 4.30
2291 2660 3.934391 GACGCGGTTGGTGGAGGAG 62.934 68.421 12.47 0.00 0.00 3.69
2292 2661 3.998672 GACGCGGTTGGTGGAGGA 61.999 66.667 12.47 0.00 0.00 3.71
2293 2662 3.934391 GAGACGCGGTTGGTGGAGG 62.934 68.421 12.47 0.00 0.00 4.30
2294 2663 2.432628 GAGACGCGGTTGGTGGAG 60.433 66.667 12.47 0.00 0.00 3.86
2295 2664 3.998672 GGAGACGCGGTTGGTGGA 61.999 66.667 12.47 0.00 0.00 4.02
2296 2665 3.934391 GAGGAGACGCGGTTGGTGG 62.934 68.421 12.47 0.00 0.00 4.61
2297 2666 2.432628 GAGGAGACGCGGTTGGTG 60.433 66.667 12.47 0.00 0.00 4.17
2298 2667 3.692406 GGAGGAGACGCGGTTGGT 61.692 66.667 12.47 0.00 0.00 3.67
2299 2668 3.691342 TGGAGGAGACGCGGTTGG 61.691 66.667 12.47 0.00 0.00 3.77
2300 2669 2.432628 GTGGAGGAGACGCGGTTG 60.433 66.667 12.47 0.00 0.00 3.77
2301 2670 3.692406 GGTGGAGGAGACGCGGTT 61.692 66.667 12.47 0.00 0.00 4.44
2302 2671 4.988716 TGGTGGAGGAGACGCGGT 62.989 66.667 12.47 0.00 0.00 5.68
2303 2672 4.436998 GTGGTGGAGGAGACGCGG 62.437 72.222 12.47 0.00 0.00 6.46
2304 2673 4.436998 GGTGGTGGAGGAGACGCG 62.437 72.222 3.53 3.53 0.00 6.01
2305 2674 2.508586 GAAGGTGGTGGAGGAGACGC 62.509 65.000 0.00 0.00 0.00 5.19
2306 2675 1.185618 TGAAGGTGGTGGAGGAGACG 61.186 60.000 0.00 0.00 0.00 4.18
2307 2676 0.321996 GTGAAGGTGGTGGAGGAGAC 59.678 60.000 0.00 0.00 0.00 3.36
2308 2677 0.836400 GGTGAAGGTGGTGGAGGAGA 60.836 60.000 0.00 0.00 0.00 3.71
2309 2678 0.838122 AGGTGAAGGTGGTGGAGGAG 60.838 60.000 0.00 0.00 0.00 3.69
2310 2679 0.836400 GAGGTGAAGGTGGTGGAGGA 60.836 60.000 0.00 0.00 0.00 3.71
2311 2680 1.679898 GAGGTGAAGGTGGTGGAGG 59.320 63.158 0.00 0.00 0.00 4.30
2312 2681 1.127567 TGGAGGTGAAGGTGGTGGAG 61.128 60.000 0.00 0.00 0.00 3.86
2313 2682 1.074090 TGGAGGTGAAGGTGGTGGA 60.074 57.895 0.00 0.00 0.00 4.02
2314 2683 1.073199 GTGGAGGTGAAGGTGGTGG 59.927 63.158 0.00 0.00 0.00 4.61
2315 2684 1.073199 GGTGGAGGTGAAGGTGGTG 59.927 63.158 0.00 0.00 0.00 4.17
2316 2685 2.154074 GGGTGGAGGTGAAGGTGGT 61.154 63.158 0.00 0.00 0.00 4.16
2317 2686 2.757077 GGGTGGAGGTGAAGGTGG 59.243 66.667 0.00 0.00 0.00 4.61
2318 2687 2.757077 GGGGTGGAGGTGAAGGTG 59.243 66.667 0.00 0.00 0.00 4.00
2319 2688 2.531942 GGGGGTGGAGGTGAAGGT 60.532 66.667 0.00 0.00 0.00 3.50
2320 2689 3.717294 CGGGGGTGGAGGTGAAGG 61.717 72.222 0.00 0.00 0.00 3.46
2321 2690 2.928396 ACGGGGGTGGAGGTGAAG 60.928 66.667 0.00 0.00 0.00 3.02
2322 2691 2.926242 GACGGGGGTGGAGGTGAA 60.926 66.667 0.00 0.00 0.00 3.18
2340 2724 3.420482 GGAGGTGGGGGTGATGGG 61.420 72.222 0.00 0.00 0.00 4.00
2435 2819 2.092882 GGAGCTGGCACGTCGTAAC 61.093 63.158 0.00 0.00 0.00 2.50
2436 2820 2.260434 GGAGCTGGCACGTCGTAA 59.740 61.111 0.00 0.00 0.00 3.18
2442 2826 1.437986 GTAGTAGGGAGCTGGCACG 59.562 63.158 0.00 0.00 0.00 5.34
2500 2884 3.330267 GTGGAGACTCTTGGTAAGCTTG 58.670 50.000 9.86 0.00 0.00 4.01
2501 2885 2.303311 GGTGGAGACTCTTGGTAAGCTT 59.697 50.000 3.48 3.48 0.00 3.74
2547 2931 2.413142 CGACAGGTACCGGTCCTCC 61.413 68.421 31.42 13.06 37.76 4.30
2823 3207 6.122277 TGAAGAAGAAGAAGAACACACCAAT 58.878 36.000 0.00 0.00 0.00 3.16
2947 3343 7.053316 TGACAACAATTTCATTGAATCCACT 57.947 32.000 0.00 0.00 42.83 4.00
3032 3428 4.322567 AGTCTTCAGATTCTTGTTCTGCC 58.677 43.478 0.00 0.00 40.35 4.85
3183 3583 3.094062 GCTAGCGCTCCCCATGTCA 62.094 63.158 16.34 0.00 0.00 3.58
3242 3642 0.389948 GAGCGTCAACCGTCAAGGAT 60.390 55.000 0.00 0.00 45.00 3.24
3243 3643 1.006571 GAGCGTCAACCGTCAAGGA 60.007 57.895 0.00 0.00 45.00 3.36
3245 3645 1.891060 GCTGAGCGTCAACCGTCAAG 61.891 60.000 0.00 0.00 39.32 3.02
3246 3646 1.954146 GCTGAGCGTCAACCGTCAA 60.954 57.895 0.00 0.00 39.32 3.18
3247 3647 2.355837 GCTGAGCGTCAACCGTCA 60.356 61.111 0.00 0.00 39.32 4.35
3248 3648 3.112709 GGCTGAGCGTCAACCGTC 61.113 66.667 0.00 0.00 39.32 4.79
3252 3652 3.482783 GAGCGGCTGAGCGTCAAC 61.483 66.667 7.50 0.00 43.00 3.18
3410 3832 3.986996 AGCTAAGGTACGCCCTAAAAA 57.013 42.857 0.00 0.00 45.47 1.94
3411 3833 3.986996 AAGCTAAGGTACGCCCTAAAA 57.013 42.857 0.00 0.00 45.47 1.52
3412 3834 3.986996 AAAGCTAAGGTACGCCCTAAA 57.013 42.857 0.00 0.00 45.47 1.85
3413 3835 6.070656 TCTATAAAGCTAAGGTACGCCCTAA 58.929 40.000 0.00 0.00 45.47 2.69
3414 3836 5.634118 TCTATAAAGCTAAGGTACGCCCTA 58.366 41.667 0.00 0.00 45.47 3.53
3416 3838 4.861102 TCTATAAAGCTAAGGTACGCCC 57.139 45.455 0.00 0.00 34.57 6.13
3417 3839 6.982724 TCTTTTCTATAAAGCTAAGGTACGCC 59.017 38.462 0.00 0.00 0.00 5.68
3418 3840 7.919621 TCTCTTTTCTATAAAGCTAAGGTACGC 59.080 37.037 0.00 0.00 0.00 4.42
3419 3841 9.798994 TTCTCTTTTCTATAAAGCTAAGGTACG 57.201 33.333 0.00 0.00 0.00 3.67
3460 3882 9.982651 TGACTCCTAACTAGCACAAATATAATC 57.017 33.333 0.00 0.00 0.00 1.75
3461 3883 9.765795 GTGACTCCTAACTAGCACAAATATAAT 57.234 33.333 0.00 0.00 0.00 1.28
3462 3884 8.755028 TGTGACTCCTAACTAGCACAAATATAA 58.245 33.333 0.00 0.00 32.17 0.98
3463 3885 8.301252 TGTGACTCCTAACTAGCACAAATATA 57.699 34.615 0.00 0.00 32.17 0.86
3464 3886 7.182817 TGTGACTCCTAACTAGCACAAATAT 57.817 36.000 0.00 0.00 32.17 1.28
3465 3887 6.599356 TGTGACTCCTAACTAGCACAAATA 57.401 37.500 0.00 0.00 32.17 1.40
3466 3888 5.483685 TGTGACTCCTAACTAGCACAAAT 57.516 39.130 0.00 0.00 32.17 2.32
3467 3889 4.948341 TGTGACTCCTAACTAGCACAAA 57.052 40.909 0.00 0.00 32.17 2.83
3468 3890 4.799586 GCTTGTGACTCCTAACTAGCACAA 60.800 45.833 0.00 0.00 42.37 3.33
3469 3891 3.306088 GCTTGTGACTCCTAACTAGCACA 60.306 47.826 4.72 0.00 42.37 4.57
3470 3892 3.254892 GCTTGTGACTCCTAACTAGCAC 58.745 50.000 4.72 0.00 42.37 4.40
3471 3893 2.233922 GGCTTGTGACTCCTAACTAGCA 59.766 50.000 10.48 0.00 43.88 3.49
3472 3894 2.735762 CGGCTTGTGACTCCTAACTAGC 60.736 54.545 0.00 0.00 42.17 3.42
3473 3895 2.753452 TCGGCTTGTGACTCCTAACTAG 59.247 50.000 0.00 0.00 0.00 2.57
3474 3896 2.490903 GTCGGCTTGTGACTCCTAACTA 59.509 50.000 0.00 0.00 33.54 2.24
3475 3897 1.272769 GTCGGCTTGTGACTCCTAACT 59.727 52.381 0.00 0.00 33.54 2.24
3476 3898 1.672145 GGTCGGCTTGTGACTCCTAAC 60.672 57.143 0.00 0.00 36.58 2.34
3477 3899 0.606604 GGTCGGCTTGTGACTCCTAA 59.393 55.000 0.00 0.00 36.58 2.69
3478 3900 1.255667 GGGTCGGCTTGTGACTCCTA 61.256 60.000 0.00 0.00 36.58 2.94
3479 3901 2.584391 GGGTCGGCTTGTGACTCCT 61.584 63.158 0.00 0.00 36.58 3.69
3480 3902 1.255667 TAGGGTCGGCTTGTGACTCC 61.256 60.000 0.00 0.00 37.56 3.85
3481 3903 0.606604 TTAGGGTCGGCTTGTGACTC 59.393 55.000 0.00 0.00 37.09 3.36
3482 3904 0.320697 GTTAGGGTCGGCTTGTGACT 59.679 55.000 0.00 0.00 36.58 3.41
3483 3905 0.672711 GGTTAGGGTCGGCTTGTGAC 60.673 60.000 0.00 0.00 35.60 3.67
3484 3906 1.122632 TGGTTAGGGTCGGCTTGTGA 61.123 55.000 0.00 0.00 0.00 3.58
3485 3907 0.250553 TTGGTTAGGGTCGGCTTGTG 60.251 55.000 0.00 0.00 0.00 3.33
3486 3908 0.036306 CTTGGTTAGGGTCGGCTTGT 59.964 55.000 0.00 0.00 0.00 3.16
3487 3909 1.305930 GCTTGGTTAGGGTCGGCTTG 61.306 60.000 0.00 0.00 0.00 4.01
3488 3910 1.002502 GCTTGGTTAGGGTCGGCTT 60.003 57.895 0.00 0.00 0.00 4.35
3489 3911 2.669240 GCTTGGTTAGGGTCGGCT 59.331 61.111 0.00 0.00 0.00 5.52
3490 3912 2.437895 GGCTTGGTTAGGGTCGGC 60.438 66.667 0.00 0.00 0.00 5.54
3491 3913 1.221021 GAGGCTTGGTTAGGGTCGG 59.779 63.158 0.00 0.00 0.00 4.79
3492 3914 1.136500 GTAGAGGCTTGGTTAGGGTCG 59.864 57.143 0.00 0.00 0.00 4.79
3493 3915 1.485480 GGTAGAGGCTTGGTTAGGGTC 59.515 57.143 0.00 0.00 0.00 4.46
3494 3916 1.581223 GGTAGAGGCTTGGTTAGGGT 58.419 55.000 0.00 0.00 0.00 4.34
3495 3917 0.837940 GGGTAGAGGCTTGGTTAGGG 59.162 60.000 0.00 0.00 0.00 3.53
3496 3918 0.837940 GGGGTAGAGGCTTGGTTAGG 59.162 60.000 0.00 0.00 0.00 2.69
3497 3919 1.209747 GTGGGGTAGAGGCTTGGTTAG 59.790 57.143 0.00 0.00 0.00 2.34
3498 3920 1.203389 AGTGGGGTAGAGGCTTGGTTA 60.203 52.381 0.00 0.00 0.00 2.85
3499 3921 0.475828 AGTGGGGTAGAGGCTTGGTT 60.476 55.000 0.00 0.00 0.00 3.67
3500 3922 0.910088 GAGTGGGGTAGAGGCTTGGT 60.910 60.000 0.00 0.00 0.00 3.67
3501 3923 1.627297 GGAGTGGGGTAGAGGCTTGG 61.627 65.000 0.00 0.00 0.00 3.61
3502 3924 0.618968 AGGAGTGGGGTAGAGGCTTG 60.619 60.000 0.00 0.00 0.00 4.01
3503 3925 1.016415 TAGGAGTGGGGTAGAGGCTT 58.984 55.000 0.00 0.00 0.00 4.35
3504 3926 0.262285 GTAGGAGTGGGGTAGAGGCT 59.738 60.000 0.00 0.00 0.00 4.58
3505 3927 0.032416 TGTAGGAGTGGGGTAGAGGC 60.032 60.000 0.00 0.00 0.00 4.70
3506 3928 2.091278 TGATGTAGGAGTGGGGTAGAGG 60.091 54.545 0.00 0.00 0.00 3.69
3507 3929 3.314307 TGATGTAGGAGTGGGGTAGAG 57.686 52.381 0.00 0.00 0.00 2.43
3508 3930 3.993658 ATGATGTAGGAGTGGGGTAGA 57.006 47.619 0.00 0.00 0.00 2.59
3509 3931 4.742012 AGTATGATGTAGGAGTGGGGTAG 58.258 47.826 0.00 0.00 0.00 3.18
3510 3932 4.737578 GAGTATGATGTAGGAGTGGGGTA 58.262 47.826 0.00 0.00 0.00 3.69
3511 3933 3.577919 GAGTATGATGTAGGAGTGGGGT 58.422 50.000 0.00 0.00 0.00 4.95
3512 3934 2.558795 CGAGTATGATGTAGGAGTGGGG 59.441 54.545 0.00 0.00 0.00 4.96
3513 3935 3.253677 GTCGAGTATGATGTAGGAGTGGG 59.746 52.174 0.00 0.00 0.00 4.61
3514 3936 4.138290 AGTCGAGTATGATGTAGGAGTGG 58.862 47.826 0.00 0.00 0.00 4.00
3515 3937 5.992829 AGTAGTCGAGTATGATGTAGGAGTG 59.007 44.000 2.72 0.00 0.00 3.51
3516 3938 6.177310 AGTAGTCGAGTATGATGTAGGAGT 57.823 41.667 2.72 0.00 0.00 3.85
3517 3939 6.715344 GAGTAGTCGAGTATGATGTAGGAG 57.285 45.833 2.72 0.00 0.00 3.69
3532 3954 2.746362 ACAACTAGTTCCCGAGTAGTCG 59.254 50.000 13.16 13.16 42.42 4.18
3533 3955 3.128415 GGACAACTAGTTCCCGAGTAGTC 59.872 52.174 4.77 7.45 42.42 2.59
3534 3956 3.087781 GGACAACTAGTTCCCGAGTAGT 58.912 50.000 4.77 0.00 44.58 2.73
3535 3957 3.354467 AGGACAACTAGTTCCCGAGTAG 58.646 50.000 4.77 0.00 37.32 2.57
3536 3958 3.350833 GAGGACAACTAGTTCCCGAGTA 58.649 50.000 4.77 0.00 0.00 2.59
3537 3959 2.169330 GAGGACAACTAGTTCCCGAGT 58.831 52.381 4.77 0.00 0.00 4.18
3538 3960 1.477295 GGAGGACAACTAGTTCCCGAG 59.523 57.143 4.77 0.00 0.00 4.63
3539 3961 1.203087 TGGAGGACAACTAGTTCCCGA 60.203 52.381 4.77 0.00 0.00 5.14
3540 3962 1.263356 TGGAGGACAACTAGTTCCCG 58.737 55.000 4.77 0.00 0.00 5.14
3541 3963 3.409570 GTTTGGAGGACAACTAGTTCCC 58.590 50.000 4.77 10.08 39.19 3.97
3542 3964 3.064931 CGTTTGGAGGACAACTAGTTCC 58.935 50.000 4.77 5.23 39.19 3.62
3543 3965 2.479275 GCGTTTGGAGGACAACTAGTTC 59.521 50.000 4.77 0.00 39.19 3.01
3544 3966 2.104281 AGCGTTTGGAGGACAACTAGTT 59.896 45.455 1.12 1.12 39.19 2.24
3545 3967 1.692519 AGCGTTTGGAGGACAACTAGT 59.307 47.619 0.00 0.00 39.19 2.57
3546 3968 2.338500 GAGCGTTTGGAGGACAACTAG 58.662 52.381 0.00 0.00 39.19 2.57
3547 3969 1.001633 GGAGCGTTTGGAGGACAACTA 59.998 52.381 0.00 0.00 39.19 2.24
3548 3970 0.250338 GGAGCGTTTGGAGGACAACT 60.250 55.000 0.00 0.00 39.19 3.16
3549 3971 0.250338 AGGAGCGTTTGGAGGACAAC 60.250 55.000 0.00 0.00 39.19 3.32
3550 3972 0.250295 CAGGAGCGTTTGGAGGACAA 60.250 55.000 0.00 0.00 37.28 3.18
3551 3973 1.371183 CAGGAGCGTTTGGAGGACA 59.629 57.895 0.00 0.00 0.00 4.02
3552 3974 2.035442 GCAGGAGCGTTTGGAGGAC 61.035 63.158 0.00 0.00 0.00 3.85
3553 3975 2.347490 GCAGGAGCGTTTGGAGGA 59.653 61.111 0.00 0.00 0.00 3.71
3554 3976 2.747855 GGCAGGAGCGTTTGGAGG 60.748 66.667 0.00 0.00 43.41 4.30
3555 3977 3.121030 CGGCAGGAGCGTTTGGAG 61.121 66.667 0.00 0.00 43.41 3.86
3556 3978 3.936203 ACGGCAGGAGCGTTTGGA 61.936 61.111 0.00 0.00 43.41 3.53
3557 3979 3.726517 CACGGCAGGAGCGTTTGG 61.727 66.667 0.00 0.00 43.41 3.28
3558 3980 3.726517 CCACGGCAGGAGCGTTTG 61.727 66.667 0.00 0.00 43.41 2.93
3573 3995 1.126329 TTGTTAGTGGTACCCCGCCA 61.126 55.000 10.07 0.00 42.59 5.69
3574 3996 0.392060 CTTGTTAGTGGTACCCCGCC 60.392 60.000 10.07 0.00 42.59 6.13
3575 3997 0.322648 ACTTGTTAGTGGTACCCCGC 59.677 55.000 10.07 0.00 41.87 6.13
3576 3998 2.845363 AACTTGTTAGTGGTACCCCG 57.155 50.000 10.07 0.00 34.01 5.73
3577 3999 4.209538 ACAAAACTTGTTAGTGGTACCCC 58.790 43.478 10.07 0.00 42.22 4.95
3608 4030 3.118112 TGTTAGTGGTACCCCGTCAAAAA 60.118 43.478 10.07 0.00 0.00 1.94
3609 4031 2.437281 TGTTAGTGGTACCCCGTCAAAA 59.563 45.455 10.07 0.00 0.00 2.44
3610 4032 2.045524 TGTTAGTGGTACCCCGTCAAA 58.954 47.619 10.07 0.00 0.00 2.69
3611 4033 1.714541 TGTTAGTGGTACCCCGTCAA 58.285 50.000 10.07 0.00 0.00 3.18
3612 4034 1.619827 CTTGTTAGTGGTACCCCGTCA 59.380 52.381 10.07 0.00 0.00 4.35
3613 4035 1.620323 ACTTGTTAGTGGTACCCCGTC 59.380 52.381 10.07 0.00 31.99 4.79
3614 4036 1.720781 ACTTGTTAGTGGTACCCCGT 58.279 50.000 10.07 0.00 31.99 5.28
3615 4037 2.037511 TCAACTTGTTAGTGGTACCCCG 59.962 50.000 10.07 0.00 34.01 5.73
3616 4038 3.775261 TCAACTTGTTAGTGGTACCCC 57.225 47.619 10.07 0.00 34.01 4.95
3617 4039 5.048991 CACATTCAACTTGTTAGTGGTACCC 60.049 44.000 10.07 0.32 34.01 3.69
3618 4040 5.529800 ACACATTCAACTTGTTAGTGGTACC 59.470 40.000 4.43 4.43 34.01 3.34
3619 4041 6.427150 CACACATTCAACTTGTTAGTGGTAC 58.573 40.000 11.84 0.00 34.01 3.34
3620 4042 5.008217 GCACACATTCAACTTGTTAGTGGTA 59.992 40.000 11.84 0.00 34.01 3.25
3621 4043 4.202010 GCACACATTCAACTTGTTAGTGGT 60.202 41.667 11.84 0.00 34.01 4.16
3622 4044 4.202000 TGCACACATTCAACTTGTTAGTGG 60.202 41.667 11.84 0.00 34.01 4.00
3623 4045 4.919206 TGCACACATTCAACTTGTTAGTG 58.081 39.130 0.00 0.00 34.01 2.74
3624 4046 5.772825 ATGCACACATTCAACTTGTTAGT 57.227 34.783 0.00 0.00 31.13 2.24
3625 4047 5.107760 GCAATGCACACATTCAACTTGTTAG 60.108 40.000 0.00 0.00 44.83 2.34
3626 4048 4.744137 GCAATGCACACATTCAACTTGTTA 59.256 37.500 0.00 0.00 44.83 2.41
3627 4049 3.556775 GCAATGCACACATTCAACTTGTT 59.443 39.130 0.00 0.00 44.83 2.83
3628 4050 3.125316 GCAATGCACACATTCAACTTGT 58.875 40.909 0.00 0.00 44.83 3.16
3629 4051 3.124560 TGCAATGCACACATTCAACTTG 58.875 40.909 2.72 0.00 44.83 3.16
3630 4052 3.455990 TGCAATGCACACATTCAACTT 57.544 38.095 2.72 0.00 44.83 2.66
3642 4064 0.878416 GTTTCCCTACGTGCAATGCA 59.122 50.000 2.72 2.72 35.60 3.96
3643 4065 0.179200 CGTTTCCCTACGTGCAATGC 60.179 55.000 0.00 0.00 36.80 3.56
3644 4066 0.446222 CCGTTTCCCTACGTGCAATG 59.554 55.000 0.00 0.00 39.81 2.82
3645 4067 1.303091 GCCGTTTCCCTACGTGCAAT 61.303 55.000 0.00 0.00 39.81 3.56
3646 4068 1.962306 GCCGTTTCCCTACGTGCAA 60.962 57.895 0.00 0.00 39.81 4.08
3647 4069 1.534336 TAGCCGTTTCCCTACGTGCA 61.534 55.000 0.00 0.00 39.81 4.57
3648 4070 1.080435 GTAGCCGTTTCCCTACGTGC 61.080 60.000 0.00 0.00 39.81 5.34
3649 4071 3.040409 GTAGCCGTTTCCCTACGTG 57.960 57.895 0.00 0.00 39.81 4.49
3652 4074 0.247460 AACCGTAGCCGTTTCCCTAC 59.753 55.000 0.00 0.00 0.00 3.18
3653 4075 1.750778 CTAACCGTAGCCGTTTCCCTA 59.249 52.381 0.00 0.00 0.00 3.53
3654 4076 0.533951 CTAACCGTAGCCGTTTCCCT 59.466 55.000 0.00 0.00 0.00 4.20
3655 4077 0.532115 TCTAACCGTAGCCGTTTCCC 59.468 55.000 0.00 0.00 0.00 3.97
3656 4078 1.918595 CTCTAACCGTAGCCGTTTCC 58.081 55.000 0.00 0.00 0.00 3.13
3657 4079 1.275505 GCTCTAACCGTAGCCGTTTC 58.724 55.000 0.00 0.00 32.40 2.78
3658 4080 0.604578 TGCTCTAACCGTAGCCGTTT 59.395 50.000 0.00 0.00 37.97 3.60
3659 4081 0.604578 TTGCTCTAACCGTAGCCGTT 59.395 50.000 0.00 0.00 37.97 4.44
3660 4082 0.108945 GTTGCTCTAACCGTAGCCGT 60.109 55.000 0.00 0.00 37.97 5.68
3661 4083 0.172803 AGTTGCTCTAACCGTAGCCG 59.827 55.000 0.00 0.00 40.24 5.52
3662 4084 1.471153 GGAGTTGCTCTAACCGTAGCC 60.471 57.143 0.00 0.00 40.24 3.93
3663 4085 1.203994 TGGAGTTGCTCTAACCGTAGC 59.796 52.381 0.00 0.00 40.24 3.58
3664 4086 3.251571 GTTGGAGTTGCTCTAACCGTAG 58.748 50.000 12.41 0.00 43.15 3.51
3665 4087 2.352030 CGTTGGAGTTGCTCTAACCGTA 60.352 50.000 16.07 0.00 45.09 4.02
3666 4088 1.604693 CGTTGGAGTTGCTCTAACCGT 60.605 52.381 16.07 0.00 45.09 4.83
3667 4089 1.068474 CGTTGGAGTTGCTCTAACCG 58.932 55.000 16.07 9.78 45.09 4.44
3668 4090 1.439679 CCGTTGGAGTTGCTCTAACC 58.560 55.000 16.07 0.00 45.09 2.85
3669 4091 1.439679 CCCGTTGGAGTTGCTCTAAC 58.560 55.000 13.14 13.14 44.66 2.34
3670 4092 0.321298 GCCCGTTGGAGTTGCTCTAA 60.321 55.000 0.00 0.00 0.00 2.10
3671 4093 1.295423 GCCCGTTGGAGTTGCTCTA 59.705 57.895 0.00 0.00 0.00 2.43
3672 4094 2.032681 GCCCGTTGGAGTTGCTCT 59.967 61.111 0.00 0.00 0.00 4.09
3673 4095 3.056328 GGCCCGTTGGAGTTGCTC 61.056 66.667 0.00 0.00 0.00 4.26
3676 4098 3.047877 GTCGGCCCGTTGGAGTTG 61.048 66.667 1.63 0.00 0.00 3.16
3677 4099 4.324991 GGTCGGCCCGTTGGAGTT 62.325 66.667 1.63 0.00 0.00 3.01
3690 4112 0.390209 ATTACCGTCCGTTTGGGTCG 60.390 55.000 0.00 0.00 45.31 4.79
3691 4113 1.812235 AATTACCGTCCGTTTGGGTC 58.188 50.000 0.00 0.00 35.28 4.46
3692 4114 2.153645 GAAATTACCGTCCGTTTGGGT 58.846 47.619 0.00 0.00 37.84 4.51
3693 4115 1.129064 CGAAATTACCGTCCGTTTGGG 59.871 52.381 0.00 0.00 35.24 4.12
3694 4116 1.799994 ACGAAATTACCGTCCGTTTGG 59.200 47.619 0.00 0.00 34.97 3.28
3702 4124 1.073177 CAAGCGGACGAAATTACCGT 58.927 50.000 0.00 5.63 46.95 4.83
3704 4126 0.730840 CCCAAGCGGACGAAATTACC 59.269 55.000 0.00 0.00 0.00 2.85
3705 4127 1.395954 GACCCAAGCGGACGAAATTAC 59.604 52.381 0.00 0.00 34.64 1.89
3706 4128 1.729284 GACCCAAGCGGACGAAATTA 58.271 50.000 0.00 0.00 34.64 1.40
3707 4129 2.551644 GACCCAAGCGGACGAAATT 58.448 52.632 0.00 0.00 34.64 1.82
3708 4130 4.296265 GACCCAAGCGGACGAAAT 57.704 55.556 0.00 0.00 34.64 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.