Multiple sequence alignment - TraesCS3D01G213600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G213600 chr3D 100.000 7666 0 0 1 7666 287483552 287475887 0.000000e+00 14157.0
1 TraesCS3D01G213600 chr3D 92.821 390 28 0 1600 1989 287481367 287480978 4.020000e-157 566.0
2 TraesCS3D01G213600 chr3D 92.821 390 28 0 2186 2575 287481953 287481564 4.020000e-157 566.0
3 TraesCS3D01G213600 chr3D 91.371 197 15 2 1991 2186 287481099 287480904 1.270000e-67 268.0
4 TraesCS3D01G213600 chr3D 91.371 197 15 2 2454 2649 287481562 287481367 1.270000e-67 268.0
5 TraesCS3D01G213600 chr3D 100.000 125 0 0 1866 1990 287481564 287481440 1.660000e-56 231.0
6 TraesCS3D01G213600 chr3D 100.000 125 0 0 1989 2113 287481687 287481563 1.660000e-56 231.0
7 TraesCS3D01G213600 chr3D 76.000 375 65 15 3 361 322769025 322768660 3.680000e-38 171.0
8 TraesCS3D01G213600 chr3D 81.731 104 13 4 74 172 291589046 291589148 1.770000e-11 82.4
9 TraesCS3D01G213600 chr3D 100.000 29 0 0 3277 3305 389910792 389910764 4.000000e-03 54.7
10 TraesCS3D01G213600 chr3A 96.066 5414 134 35 1989 7393 377147770 377142427 0.000000e+00 8745.0
11 TraesCS3D01G213600 chr3A 95.805 1788 69 3 204 1990 377149428 377147646 0.000000e+00 2881.0
12 TraesCS3D01G213600 chr3A 93.548 465 29 1 2186 2649 377148036 377147572 0.000000e+00 691.0
13 TraesCS3D01G213600 chr3A 93.401 394 25 1 1600 1993 377147572 377147180 3.990000e-162 582.0
14 TraesCS3D01G213600 chr3A 93.237 207 9 1 1 202 377150196 377149990 4.500000e-77 300.0
15 TraesCS3D01G213600 chr3A 92.386 197 13 2 1991 2186 377147304 377147109 5.860000e-71 279.0
16 TraesCS3D01G213600 chr3A 74.074 378 66 19 3 361 400752163 400752527 8.080000e-25 126.0
17 TraesCS3D01G213600 chr3A 86.765 68 7 2 5029 5095 710277821 710277887 2.970000e-09 75.0
18 TraesCS3D01G213600 chr3A 100.000 30 0 0 3277 3306 329061417 329061388 1.000000e-03 56.5
19 TraesCS3D01G213600 chr3A 100.000 29 0 0 3277 3305 510595885 510595857 4.000000e-03 54.7
20 TraesCS3D01G213600 chr3B 93.730 1898 52 24 3253 5140 380682146 380680306 0.000000e+00 2784.0
21 TraesCS3D01G213600 chr3B 97.020 1611 27 6 5784 7393 380679464 380677874 0.000000e+00 2689.0
22 TraesCS3D01G213600 chr3B 96.767 1330 38 2 474 1803 380685260 380683936 0.000000e+00 2213.0
23 TraesCS3D01G213600 chr3B 96.807 689 21 1 1989 2676 380683790 380683102 0.000000e+00 1149.0
24 TraesCS3D01G213600 chr3B 98.302 648 11 0 5138 5785 380680193 380679546 0.000000e+00 1136.0
25 TraesCS3D01G213600 chr3B 94.677 526 11 3 2619 3143 380683102 380682593 0.000000e+00 800.0
26 TraesCS3D01G213600 chr3B 92.893 394 27 1 1600 1993 380683592 380683200 8.630000e-159 571.0
27 TraesCS3D01G213600 chr3B 87.123 497 39 10 1 476 380685912 380685420 2.430000e-149 540.0
28 TraesCS3D01G213600 chr3B 94.872 273 14 0 7394 7666 380672670 380672398 1.980000e-115 427.0
29 TraesCS3D01G213600 chr3B 93.916 263 15 1 2388 2649 380683854 380683592 5.570000e-106 396.0
30 TraesCS3D01G213600 chr3B 97.884 189 4 0 1802 1990 380683854 380683666 2.060000e-85 327.0
31 TraesCS3D01G213600 chr3B 90.686 204 17 2 2186 2389 380684137 380683936 3.530000e-68 270.0
32 TraesCS3D01G213600 chr3B 91.371 197 15 2 1991 2186 380683324 380683129 1.270000e-67 268.0
33 TraesCS3D01G213600 chr3B 95.238 63 3 0 3126 3188 380682195 380682133 4.890000e-17 100.0
34 TraesCS3D01G213600 chr3B 90.541 74 7 0 455 528 72463347 72463420 1.760000e-16 99.0
35 TraesCS3D01G213600 chr3B 80.769 104 14 5 74 172 69173923 69173821 8.250000e-10 76.8
36 TraesCS3D01G213600 chr7A 87.719 171 20 1 3597 3767 640542638 640542469 1.690000e-46 198.0
37 TraesCS3D01G213600 chr7A 87.395 119 15 0 3649 3767 602095008 602094890 3.730000e-28 137.0
38 TraesCS3D01G213600 chr7A 83.871 93 11 4 293 383 589245394 589245484 1.370000e-12 86.1
39 TraesCS3D01G213600 chr7A 91.489 47 1 2 3344 3390 507687748 507687705 2.310000e-05 62.1
40 TraesCS3D01G213600 chr7A 91.489 47 1 2 3344 3390 640542812 640542769 2.310000e-05 62.1
41 TraesCS3D01G213600 chr7A 91.489 47 1 2 3344 3390 682200359 682200402 2.310000e-05 62.1
42 TraesCS3D01G213600 chr2A 87.719 171 20 1 3597 3767 750326041 750325872 1.690000e-46 198.0
43 TraesCS3D01G213600 chr2A 79.200 250 39 8 104 340 676372217 676372466 2.210000e-35 161.0
44 TraesCS3D01G213600 chr2A 91.489 47 1 2 3344 3390 750326213 750326170 2.310000e-05 62.1
45 TraesCS3D01G213600 chr2A 92.105 38 1 1 3276 3311 582635075 582635038 1.400000e-02 52.8
46 TraesCS3D01G213600 chr5A 87.209 172 19 3 3597 3767 606178230 606178061 7.850000e-45 193.0
47 TraesCS3D01G213600 chr5A 79.245 106 15 4 5034 5132 567736061 567736166 4.960000e-07 67.6
48 TraesCS3D01G213600 chr5A 91.489 47 1 2 3344 3390 606486034 606485991 2.310000e-05 62.1
49 TraesCS3D01G213600 chr5A 100.000 31 0 0 3276 3306 448105962 448105992 2.990000e-04 58.4
50 TraesCS3D01G213600 chr5A 89.362 47 2 2 3344 3390 606178404 606178361 1.000000e-03 56.5
51 TraesCS3D01G213600 chr6D 80.247 243 39 5 149 383 423661982 423662223 2.840000e-39 174.0
52 TraesCS3D01G213600 chr6D 90.909 44 3 1 3230 3272 350632397 350632440 2.990000e-04 58.4
53 TraesCS3D01G213600 chr5D 94.366 71 4 0 454 524 374262405 374262335 8.130000e-20 110.0
54 TraesCS3D01G213600 chr5D 82.022 89 10 6 298 383 214711597 214711682 3.840000e-08 71.3
55 TraesCS3D01G213600 chr1A 77.586 174 27 7 221 383 372284848 372285020 2.280000e-15 95.3
56 TraesCS3D01G213600 chr1A 82.178 101 14 4 5033 5131 249387633 249387535 4.930000e-12 84.2
57 TraesCS3D01G213600 chr2B 96.364 55 1 1 293 347 445178493 445178440 1.060000e-13 89.8
58 TraesCS3D01G213600 chr2B 81.731 104 13 5 74 172 377420139 377420037 1.770000e-11 82.4
59 TraesCS3D01G213600 chr2B 94.286 35 2 0 3233 3267 84137970 84137936 4.000000e-03 54.7
60 TraesCS3D01G213600 chr2B 96.774 31 1 0 3245 3275 67370973 67370943 1.400000e-02 52.8
61 TraesCS3D01G213600 chr6A 83.333 90 9 6 5026 5112 15581620 15581534 2.290000e-10 78.7
62 TraesCS3D01G213600 chr6A 78.846 104 16 4 5034 5133 499792872 499792973 1.790000e-06 65.8
63 TraesCS3D01G213600 chr2D 78.626 131 19 8 47 172 408521891 408521765 2.290000e-10 78.7
64 TraesCS3D01G213600 chr7D 88.710 62 7 0 5034 5095 107266153 107266092 8.250000e-10 76.8
65 TraesCS3D01G213600 chr6B 78.462 130 19 8 47 171 105040875 105040750 8.250000e-10 76.8
66 TraesCS3D01G213600 chr1B 79.808 104 15 5 74 172 250154246 250154348 3.840000e-08 71.3
67 TraesCS3D01G213600 chr1B 96.875 32 1 0 3280 3311 17774642 17774611 4.000000e-03 54.7
68 TraesCS3D01G213600 chr4A 88.136 59 3 3 477 531 596000204 596000262 4.960000e-07 67.6
69 TraesCS3D01G213600 chr5B 79.412 102 14 6 5034 5128 548440802 548440903 1.790000e-06 65.8
70 TraesCS3D01G213600 chr1D 80.220 91 12 5 298 384 483406668 483406580 6.420000e-06 63.9
71 TraesCS3D01G213600 chr4B 100.000 30 0 0 3277 3306 74557079 74557050 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G213600 chr3D 287475887 287483552 7665 True 2326.714286 14157 95.483429 1 7666 7 chr3D.!!$R3 7665
1 TraesCS3D01G213600 chr3A 377142427 377150196 7769 True 2246.333333 8745 94.073833 1 7393 6 chr3A.!!$R3 7392
2 TraesCS3D01G213600 chr3B 380677874 380685912 8038 True 1018.692308 2784 94.339538 1 7393 13 chr3B.!!$R3 7392

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.323542 AGGTCGTGGACTCCGAAGAT 60.324 55.000 0.0 0.0 35.89 2.40 F
1688 2432 0.383949 GTTCTCGTTGCTTTTGGCCA 59.616 50.000 0.0 0.0 40.92 5.36 F
2057 2884 0.179020 TTGTTGCTGGAGGAGTGGTG 60.179 55.000 0.0 0.0 0.00 4.17 F
2059 2886 0.326264 GTTGCTGGAGGAGTGGTGAT 59.674 55.000 0.0 0.0 0.00 3.06 F
3627 4941 0.741915 GGCGTTTGGAAGTTGGAACA 59.258 50.000 0.0 0.0 0.00 3.18 F
4422 5737 1.403514 CGACCTGAGAGTCTTCTTGGC 60.404 57.143 0.0 0.0 34.46 4.52 F
4868 6183 2.567169 TGTCAGGACATCTACCCTTGTG 59.433 50.000 0.0 0.0 36.21 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2038 2865 0.179020 CACCACTCCTCCAGCAACAA 60.179 55.000 0.00 0.0 0.00 2.83 R
3564 4878 0.381801 CACAAGCACACGCCTTTCTT 59.618 50.000 0.00 0.0 39.83 2.52 R
3607 4921 0.741915 GTTCCAACTTCCAAACGCCA 59.258 50.000 0.00 0.0 0.00 5.69 R
3794 5108 2.159310 CCAAACCGCAAGAAACAACAGA 60.159 45.455 0.00 0.0 43.02 3.41 R
5112 6427 2.074729 ACTACTCCCTCCGATTCAGG 57.925 55.000 0.00 0.0 0.00 3.86 R
6251 7768 0.251297 CAACCAGATTGTGCTCCCCA 60.251 55.000 0.00 0.0 33.20 4.96 R
6695 8212 1.006571 GCTCGACGAGAACCCAACA 60.007 57.895 28.43 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.818841 CGCCCATCCACGTCCATA 59.181 61.111 0.00 0.00 0.00 2.74
62 63 1.111116 AACAGGTCGTGGACTCCGAA 61.111 55.000 0.00 0.00 35.89 4.30
65 66 0.323542 AGGTCGTGGACTCCGAAGAT 60.324 55.000 0.00 0.00 35.89 2.40
243 809 1.226746 GAACAACAAGGACGTGGAGG 58.773 55.000 0.00 0.00 0.00 4.30
277 843 2.068213 GGCTAGGTTTAGGCCCGGA 61.068 63.158 0.73 0.00 44.44 5.14
332 899 7.068103 TGTGCTCCGGTTTATATGAAAATCATT 59.932 33.333 0.00 0.00 38.26 2.57
407 975 4.075682 TGGATGACCAGTTTTCGCATTAA 58.924 39.130 0.00 0.00 41.77 1.40
435 1017 1.480137 GGACTGGTCCTCACTGATCAG 59.520 57.143 21.37 21.37 46.74 2.90
437 1019 1.193323 CTGGTCCTCACTGATCAGCT 58.807 55.000 22.83 7.28 36.73 4.24
566 1310 6.605594 ACAAAATAAAGCGAATCCCCATTAGA 59.394 34.615 0.00 0.00 0.00 2.10
567 1311 7.287696 ACAAAATAAAGCGAATCCCCATTAGAT 59.712 33.333 0.00 0.00 0.00 1.98
841 1585 2.353605 CCTCTTCACACTCTCTCTTGCC 60.354 54.545 0.00 0.00 0.00 4.52
1107 1851 2.045926 ACTGGTTGCTGGATCCGC 60.046 61.111 18.08 18.08 0.00 5.54
1205 1949 0.733150 GGCGGTAAAATGCTCTCACC 59.267 55.000 0.00 0.00 0.00 4.02
1213 1957 1.501582 AATGCTCTCACCCCTCCTAC 58.498 55.000 0.00 0.00 0.00 3.18
1235 1979 1.531149 CATCGCGTTCACTTTCTGGTT 59.469 47.619 5.77 0.00 0.00 3.67
1607 2351 3.643320 TGCCATTACCCATCTAGAGACAG 59.357 47.826 0.00 0.00 0.00 3.51
1688 2432 0.383949 GTTCTCGTTGCTTTTGGCCA 59.616 50.000 0.00 0.00 40.92 5.36
1690 2434 1.327303 TCTCGTTGCTTTTGGCCATT 58.673 45.000 6.09 0.00 40.92 3.16
1743 2487 1.248785 TGGTTCGCTAAGGTCGAGCT 61.249 55.000 12.24 12.24 37.81 4.09
1791 2535 0.613012 ACAATTTGGGGAGCCTGCTC 60.613 55.000 10.68 10.68 42.04 4.26
1841 2668 4.023450 GCTTACACTTGTGGGGTTAAGTTC 60.023 45.833 5.72 0.00 35.08 3.01
1844 2671 0.879090 CTTGTGGGGTTAAGTTCGCC 59.121 55.000 0.00 0.00 38.21 5.54
1884 2711 4.518970 GGATTTTGTAGTGGTTGAAGCAGA 59.481 41.667 0.00 0.00 0.00 4.26
1924 2751 3.125316 CAAGGTGATGTTTTGTTGCTGG 58.875 45.455 0.00 0.00 0.00 4.85
1965 2792 1.148048 GAGGAGCTGAAGGGATGCC 59.852 63.158 0.00 0.00 0.00 4.40
1966 2793 2.194326 GGAGCTGAAGGGATGCCC 59.806 66.667 0.00 0.00 45.90 5.36
1975 2802 4.337013 GGGATGCCCAAATGTCGT 57.663 55.556 0.00 0.00 44.65 4.34
1976 2803 2.578683 GGGATGCCCAAATGTCGTT 58.421 52.632 0.00 0.00 44.65 3.85
1977 2804 1.757682 GGGATGCCCAAATGTCGTTA 58.242 50.000 0.00 0.00 44.65 3.18
1978 2805 2.096248 GGGATGCCCAAATGTCGTTAA 58.904 47.619 0.00 0.00 44.65 2.01
1979 2806 2.494073 GGGATGCCCAAATGTCGTTAAA 59.506 45.455 0.00 0.00 44.65 1.52
1980 2807 3.132111 GGGATGCCCAAATGTCGTTAAAT 59.868 43.478 0.00 0.00 44.65 1.40
1981 2808 4.382577 GGGATGCCCAAATGTCGTTAAATT 60.383 41.667 0.00 0.00 44.65 1.82
1982 2809 4.803613 GGATGCCCAAATGTCGTTAAATTC 59.196 41.667 0.00 0.00 0.00 2.17
1983 2810 4.855715 TGCCCAAATGTCGTTAAATTCA 57.144 36.364 0.00 0.00 0.00 2.57
1984 2811 5.201713 TGCCCAAATGTCGTTAAATTCAA 57.798 34.783 0.00 0.00 0.00 2.69
1985 2812 5.788450 TGCCCAAATGTCGTTAAATTCAAT 58.212 33.333 0.00 0.00 0.00 2.57
1986 2813 5.636965 TGCCCAAATGTCGTTAAATTCAATG 59.363 36.000 0.00 0.00 0.00 2.82
1987 2814 5.445806 GCCCAAATGTCGTTAAATTCAATGC 60.446 40.000 0.00 0.00 0.00 3.56
1988 2815 5.868801 CCCAAATGTCGTTAAATTCAATGCT 59.131 36.000 0.00 0.00 0.00 3.79
1989 2816 6.368516 CCCAAATGTCGTTAAATTCAATGCTT 59.631 34.615 0.00 0.00 0.00 3.91
1990 2817 7.095271 CCCAAATGTCGTTAAATTCAATGCTTT 60.095 33.333 0.00 0.00 0.00 3.51
1991 2818 7.741216 CCAAATGTCGTTAAATTCAATGCTTTG 59.259 33.333 5.99 5.99 0.00 2.77
1992 2819 7.945033 AATGTCGTTAAATTCAATGCTTTGT 57.055 28.000 11.67 0.00 34.32 2.83
1993 2820 9.469807 AAATGTCGTTAAATTCAATGCTTTGTA 57.530 25.926 11.67 3.35 34.32 2.41
1994 2821 8.673626 ATGTCGTTAAATTCAATGCTTTGTAG 57.326 30.769 11.67 0.00 34.32 2.74
1995 2822 7.644490 TGTCGTTAAATTCAATGCTTTGTAGT 58.356 30.769 11.67 0.00 34.32 2.73
1996 2823 7.589587 TGTCGTTAAATTCAATGCTTTGTAGTG 59.410 33.333 11.67 0.00 34.32 2.74
1997 2824 7.060633 GTCGTTAAATTCAATGCTTTGTAGTGG 59.939 37.037 11.67 0.00 34.32 4.00
1998 2825 6.861055 CGTTAAATTCAATGCTTTGTAGTGGT 59.139 34.615 11.67 0.00 34.32 4.16
1999 2826 7.381139 CGTTAAATTCAATGCTTTGTAGTGGTT 59.619 33.333 11.67 3.16 34.32 3.67
2000 2827 8.487176 GTTAAATTCAATGCTTTGTAGTGGTTG 58.513 33.333 11.67 0.00 34.32 3.77
2001 2828 6.403866 AATTCAATGCTTTGTAGTGGTTGA 57.596 33.333 11.67 0.00 34.32 3.18
2002 2829 5.843673 TTCAATGCTTTGTAGTGGTTGAA 57.156 34.783 11.67 0.00 34.32 2.69
2003 2830 5.437289 TCAATGCTTTGTAGTGGTTGAAG 57.563 39.130 11.67 0.00 34.32 3.02
2004 2831 3.923017 ATGCTTTGTAGTGGTTGAAGC 57.077 42.857 0.00 0.00 42.19 3.86
2006 2833 2.618241 TGCTTTGTAGTGGTTGAAGCAG 59.382 45.455 0.00 0.00 45.33 4.24
2007 2834 2.878406 GCTTTGTAGTGGTTGAAGCAGA 59.122 45.455 0.00 0.00 41.64 4.26
2008 2835 3.315191 GCTTTGTAGTGGTTGAAGCAGAA 59.685 43.478 0.00 0.00 41.64 3.02
2009 2836 4.555511 GCTTTGTAGTGGTTGAAGCAGAAG 60.556 45.833 0.00 0.00 41.64 2.85
2010 2837 3.838244 TGTAGTGGTTGAAGCAGAAGT 57.162 42.857 0.00 0.00 0.00 3.01
2011 2838 4.948341 TGTAGTGGTTGAAGCAGAAGTA 57.052 40.909 0.00 0.00 0.00 2.24
2012 2839 4.628074 TGTAGTGGTTGAAGCAGAAGTAC 58.372 43.478 0.00 0.00 0.00 2.73
2013 2840 3.127425 AGTGGTTGAAGCAGAAGTACC 57.873 47.619 0.00 0.00 0.00 3.34
2014 2841 2.706190 AGTGGTTGAAGCAGAAGTACCT 59.294 45.455 0.00 0.00 0.00 3.08
2015 2842 3.067833 GTGGTTGAAGCAGAAGTACCTC 58.932 50.000 0.00 0.00 0.00 3.85
2016 2843 2.703536 TGGTTGAAGCAGAAGTACCTCA 59.296 45.455 0.00 0.00 0.00 3.86
2017 2844 3.244215 TGGTTGAAGCAGAAGTACCTCAG 60.244 47.826 0.00 0.00 0.00 3.35
2018 2845 3.330267 GTTGAAGCAGAAGTACCTCAGG 58.670 50.000 0.00 0.00 0.00 3.86
2019 2846 2.609747 TGAAGCAGAAGTACCTCAGGT 58.390 47.619 0.00 0.00 40.16 4.00
2020 2847 3.774734 TGAAGCAGAAGTACCTCAGGTA 58.225 45.455 0.00 0.00 37.09 3.08
2021 2848 4.157246 TGAAGCAGAAGTACCTCAGGTAA 58.843 43.478 4.67 0.00 40.12 2.85
2022 2849 4.591498 TGAAGCAGAAGTACCTCAGGTAAA 59.409 41.667 4.67 0.00 40.12 2.01
2023 2850 5.071250 TGAAGCAGAAGTACCTCAGGTAAAA 59.929 40.000 4.67 0.00 40.12 1.52
2024 2851 5.763876 AGCAGAAGTACCTCAGGTAAAAT 57.236 39.130 4.67 0.00 40.12 1.82
2025 2852 5.491982 AGCAGAAGTACCTCAGGTAAAATG 58.508 41.667 4.67 3.81 40.12 2.32
2026 2853 4.095036 GCAGAAGTACCTCAGGTAAAATGC 59.905 45.833 4.67 10.18 40.12 3.56
2027 2854 5.245531 CAGAAGTACCTCAGGTAAAATGCA 58.754 41.667 4.67 0.00 40.12 3.96
2028 2855 5.705441 CAGAAGTACCTCAGGTAAAATGCAA 59.295 40.000 4.67 0.00 40.12 4.08
2029 2856 5.940470 AGAAGTACCTCAGGTAAAATGCAAG 59.060 40.000 4.67 0.00 40.12 4.01
2030 2857 4.589908 AGTACCTCAGGTAAAATGCAAGG 58.410 43.478 4.67 0.00 40.12 3.61
2031 2858 3.525800 ACCTCAGGTAAAATGCAAGGT 57.474 42.857 0.00 0.00 32.11 3.50
2032 2859 3.157087 ACCTCAGGTAAAATGCAAGGTG 58.843 45.455 0.00 0.00 34.46 4.00
2033 2860 3.181434 ACCTCAGGTAAAATGCAAGGTGA 60.181 43.478 0.00 0.00 34.46 4.02
2034 2861 4.019174 CCTCAGGTAAAATGCAAGGTGAT 58.981 43.478 0.00 0.00 0.00 3.06
2035 2862 4.142315 CCTCAGGTAAAATGCAAGGTGATG 60.142 45.833 0.00 0.00 0.00 3.07
2036 2863 4.406456 TCAGGTAAAATGCAAGGTGATGT 58.594 39.130 0.00 0.00 0.00 3.06
2037 2864 4.832266 TCAGGTAAAATGCAAGGTGATGTT 59.168 37.500 0.00 0.00 0.00 2.71
2038 2865 5.304101 TCAGGTAAAATGCAAGGTGATGTTT 59.696 36.000 0.00 0.00 0.00 2.83
2039 2866 5.990996 CAGGTAAAATGCAAGGTGATGTTTT 59.009 36.000 0.00 0.00 0.00 2.43
2040 2867 5.990996 AGGTAAAATGCAAGGTGATGTTTTG 59.009 36.000 0.00 0.00 0.00 2.44
2041 2868 5.757808 GGTAAAATGCAAGGTGATGTTTTGT 59.242 36.000 0.00 0.00 0.00 2.83
2042 2869 6.259829 GGTAAAATGCAAGGTGATGTTTTGTT 59.740 34.615 0.00 0.00 0.00 2.83
2043 2870 5.738118 AAATGCAAGGTGATGTTTTGTTG 57.262 34.783 0.00 0.00 0.00 3.33
2044 2871 2.548875 TGCAAGGTGATGTTTTGTTGC 58.451 42.857 0.00 0.00 40.53 4.17
2045 2872 2.168106 TGCAAGGTGATGTTTTGTTGCT 59.832 40.909 6.44 0.00 40.71 3.91
2046 2873 2.540931 GCAAGGTGATGTTTTGTTGCTG 59.459 45.455 0.00 0.00 37.80 4.41
2047 2874 3.125316 CAAGGTGATGTTTTGTTGCTGG 58.875 45.455 0.00 0.00 0.00 4.85
2048 2875 2.665165 AGGTGATGTTTTGTTGCTGGA 58.335 42.857 0.00 0.00 0.00 3.86
2049 2876 2.624838 AGGTGATGTTTTGTTGCTGGAG 59.375 45.455 0.00 0.00 0.00 3.86
2050 2877 2.288395 GGTGATGTTTTGTTGCTGGAGG 60.288 50.000 0.00 0.00 0.00 4.30
2051 2878 2.622942 GTGATGTTTTGTTGCTGGAGGA 59.377 45.455 0.00 0.00 0.00 3.71
2052 2879 2.886523 TGATGTTTTGTTGCTGGAGGAG 59.113 45.455 0.00 0.00 0.00 3.69
2053 2880 2.435372 TGTTTTGTTGCTGGAGGAGT 57.565 45.000 0.00 0.00 0.00 3.85
2054 2881 2.023673 TGTTTTGTTGCTGGAGGAGTG 58.976 47.619 0.00 0.00 0.00 3.51
2055 2882 1.338020 GTTTTGTTGCTGGAGGAGTGG 59.662 52.381 0.00 0.00 0.00 4.00
2056 2883 0.550914 TTTGTTGCTGGAGGAGTGGT 59.449 50.000 0.00 0.00 0.00 4.16
2057 2884 0.179020 TTGTTGCTGGAGGAGTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
2058 2885 1.053835 TGTTGCTGGAGGAGTGGTGA 61.054 55.000 0.00 0.00 0.00 4.02
2059 2886 0.326264 GTTGCTGGAGGAGTGGTGAT 59.674 55.000 0.00 0.00 0.00 3.06
2060 2887 1.067295 TTGCTGGAGGAGTGGTGATT 58.933 50.000 0.00 0.00 0.00 2.57
2061 2888 1.951209 TGCTGGAGGAGTGGTGATTA 58.049 50.000 0.00 0.00 0.00 1.75
2062 2889 1.555075 TGCTGGAGGAGTGGTGATTAC 59.445 52.381 0.00 0.00 0.00 1.89
2063 2890 1.834263 GCTGGAGGAGTGGTGATTACT 59.166 52.381 0.00 0.00 0.00 2.24
2064 2891 2.419297 GCTGGAGGAGTGGTGATTACTG 60.419 54.545 0.00 0.00 0.00 2.74
2065 2892 3.099905 CTGGAGGAGTGGTGATTACTGA 58.900 50.000 0.00 0.00 0.00 3.41
2066 2893 3.708631 CTGGAGGAGTGGTGATTACTGAT 59.291 47.826 0.00 0.00 0.00 2.90
2067 2894 4.104086 TGGAGGAGTGGTGATTACTGATT 58.896 43.478 0.00 0.00 0.00 2.57
2068 2895 5.277250 TGGAGGAGTGGTGATTACTGATTA 58.723 41.667 0.00 0.00 0.00 1.75
2069 2896 5.363868 TGGAGGAGTGGTGATTACTGATTAG 59.636 44.000 0.00 0.00 0.00 1.73
2070 2897 5.221541 GGAGGAGTGGTGATTACTGATTAGG 60.222 48.000 0.00 0.00 0.00 2.69
2071 2898 5.529289 AGGAGTGGTGATTACTGATTAGGA 58.471 41.667 0.00 0.00 0.00 2.94
2072 2899 5.600484 AGGAGTGGTGATTACTGATTAGGAG 59.400 44.000 0.00 0.00 0.00 3.69
2073 2900 5.221541 GGAGTGGTGATTACTGATTAGGAGG 60.222 48.000 0.00 0.00 0.00 4.30
2074 2901 5.529289 AGTGGTGATTACTGATTAGGAGGA 58.471 41.667 0.00 0.00 0.00 3.71
2075 2902 5.600484 AGTGGTGATTACTGATTAGGAGGAG 59.400 44.000 0.00 0.00 0.00 3.69
2076 2903 4.345257 TGGTGATTACTGATTAGGAGGAGC 59.655 45.833 0.00 0.00 0.00 4.70
2077 2904 4.591072 GGTGATTACTGATTAGGAGGAGCT 59.409 45.833 0.00 0.00 0.00 4.09
2078 2905 5.510520 GGTGATTACTGATTAGGAGGAGCTG 60.511 48.000 0.00 0.00 0.00 4.24
2079 2906 5.303078 GTGATTACTGATTAGGAGGAGCTGA 59.697 44.000 0.00 0.00 0.00 4.26
2080 2907 5.899547 TGATTACTGATTAGGAGGAGCTGAA 59.100 40.000 0.00 0.00 0.00 3.02
2081 2908 5.860941 TTACTGATTAGGAGGAGCTGAAG 57.139 43.478 0.00 0.00 0.00 3.02
2082 2909 3.037549 ACTGATTAGGAGGAGCTGAAGG 58.962 50.000 0.00 0.00 0.00 3.46
2083 2910 2.368221 CTGATTAGGAGGAGCTGAAGGG 59.632 54.545 0.00 0.00 0.00 3.95
2084 2911 2.023015 TGATTAGGAGGAGCTGAAGGGA 60.023 50.000 0.00 0.00 0.00 4.20
2085 2912 2.877154 TTAGGAGGAGCTGAAGGGAT 57.123 50.000 0.00 0.00 0.00 3.85
2086 2913 2.094100 TAGGAGGAGCTGAAGGGATG 57.906 55.000 0.00 0.00 0.00 3.51
2087 2914 1.148048 GGAGGAGCTGAAGGGATGC 59.852 63.158 0.00 0.00 0.00 3.91
2122 2949 9.941991 CGTTAAATTCAATGCTTGTCTATTTTG 57.058 29.630 0.00 0.00 0.00 2.44
2126 2953 5.295431 TCAATGCTTGTCTATTTTGTCCG 57.705 39.130 0.00 0.00 0.00 4.79
2167 2995 4.811908 ACAATTAATTACCGTTTGGCCAC 58.188 39.130 3.88 0.00 39.70 5.01
2211 3039 3.059935 GGCATTAAAACCGTGCAACTTTG 60.060 43.478 0.00 0.00 40.53 2.77
2305 3133 3.697045 TGTCAAAAATCCCACGTTGTCTT 59.303 39.130 0.00 0.00 0.00 3.01
2356 3184 3.336568 ATGGGCTGCTGCTCCAGT 61.337 61.111 23.03 13.16 40.81 4.00
2573 3401 6.488817 GCCCAAATGTCATTAAATTCAATGC 58.511 36.000 0.00 0.00 36.13 3.56
2575 3403 7.466320 GCCCAAATGTCATTAAATTCAATGCTC 60.466 37.037 0.00 0.00 36.13 4.26
2603 3431 5.703592 TGTTTTTGTCCATACGCTTGTAGAT 59.296 36.000 0.00 0.00 0.00 1.98
2705 3590 8.061125 ACTTTTGTTGCGAGATTTAACATTTC 57.939 30.769 0.00 0.00 34.63 2.17
2733 3618 7.428020 GTTCCATTTATGCATGCTTCAGAATA 58.572 34.615 20.33 4.09 0.00 1.75
2734 3619 7.770366 TCCATTTATGCATGCTTCAGAATAT 57.230 32.000 20.33 3.60 0.00 1.28
2735 3620 7.599171 TCCATTTATGCATGCTTCAGAATATG 58.401 34.615 20.33 10.74 0.00 1.78
2894 3783 5.414144 TCAAGTCACTTCAAATTGTCACACA 59.586 36.000 0.00 0.00 0.00 3.72
3146 4452 2.208872 AGACTTACCCATGGCCTCATT 58.791 47.619 6.09 0.00 0.00 2.57
3205 4511 1.906105 TTGACCATCAGGGCCGTACC 61.906 60.000 0.00 0.00 45.14 3.34
3214 4520 2.420466 GGCCGTACCCGAGAATCC 59.580 66.667 0.00 0.00 35.63 3.01
3236 4542 2.666317 GGGGCCAGTGCAAAATAGTAT 58.334 47.619 4.39 0.00 40.13 2.12
3238 4544 4.211920 GGGGCCAGTGCAAAATAGTATTA 58.788 43.478 4.39 0.00 40.13 0.98
3272 4578 9.071276 CCCATAATATAAGATGTTTCTGCAAGT 57.929 33.333 0.00 0.00 33.76 3.16
3316 4623 3.395941 AGGGAGTATGAAATAAGGCCCTG 59.604 47.826 0.00 0.00 41.61 4.45
3318 4625 4.349930 GGGAGTATGAAATAAGGCCCTGTA 59.650 45.833 0.00 0.00 34.56 2.74
3564 4878 7.607991 GTGATTTAAATGGAGAGAGAGGTCAAA 59.392 37.037 5.17 0.00 0.00 2.69
3607 4921 1.531602 GCTGGCCTTGGAACTGGTT 60.532 57.895 3.32 0.00 0.00 3.67
3627 4941 0.741915 GGCGTTTGGAAGTTGGAACA 59.258 50.000 0.00 0.00 0.00 3.18
3630 4944 3.453424 GCGTTTGGAAGTTGGAACATTT 58.547 40.909 0.00 0.00 39.30 2.32
3645 4959 5.006386 GGAACATTTCACAGGAGATGAAGT 58.994 41.667 2.69 0.00 37.73 3.01
3921 5235 3.058155 GGTGTGTTGTTTGTGTGTGTGTA 60.058 43.478 0.00 0.00 0.00 2.90
3952 5266 9.651913 TTGGATTATGTTTTTCCTTCTTAATGC 57.348 29.630 0.00 0.00 0.00 3.56
4029 5343 8.611654 TCTTACAGTTAGTGGTGGTATTTTTC 57.388 34.615 0.00 0.00 0.00 2.29
4030 5344 5.934935 ACAGTTAGTGGTGGTATTTTTCG 57.065 39.130 0.00 0.00 0.00 3.46
4059 5373 1.615883 TGAGAGACTGTCAGCCTTGTC 59.384 52.381 10.88 0.00 0.00 3.18
4104 5418 9.787532 TTTGCTATCACATTAGCTATTGTTTTC 57.212 29.630 16.66 7.19 44.03 2.29
4223 5538 5.422012 TGGATAATGTCTACTGTGCAGAGAA 59.578 40.000 19.13 0.00 0.00 2.87
4422 5737 1.403514 CGACCTGAGAGTCTTCTTGGC 60.404 57.143 0.00 0.00 34.46 4.52
4868 6183 2.567169 TGTCAGGACATCTACCCTTGTG 59.433 50.000 0.00 0.00 36.21 3.33
4956 6271 9.587461 GACTCGTAGGTATTATTCGTTACTTAC 57.413 37.037 0.00 0.00 0.00 2.34
4968 6283 6.998258 TTCGTTACTTACTGTTTGCTACTC 57.002 37.500 0.00 0.00 0.00 2.59
4991 6306 9.178758 ACTCCTAACTTTTTATTCCATTGCTAG 57.821 33.333 0.00 0.00 0.00 3.42
5002 6317 5.824904 TTCCATTGCTAGAATTCTGCTTC 57.175 39.130 18.47 4.91 0.00 3.86
5072 6387 8.790718 CCAAATTAATTGATGCAGCTCTAGTAT 58.209 33.333 2.53 0.00 41.85 2.12
5084 6399 8.648557 TGCAGCTCTAGTATAATTTTGTACTG 57.351 34.615 9.26 0.00 36.09 2.74
5085 6400 8.474831 TGCAGCTCTAGTATAATTTTGTACTGA 58.525 33.333 9.26 5.24 36.09 3.41
5086 6401 9.482627 GCAGCTCTAGTATAATTTTGTACTGAT 57.517 33.333 9.26 0.00 36.09 2.90
5103 6418 3.511540 ACTGATGTTGTACTAGAGCTGCA 59.488 43.478 1.02 0.00 0.00 4.41
5106 6421 3.150848 TGTTGTACTAGAGCTGCATCG 57.849 47.619 1.02 0.00 0.00 3.84
5112 6427 5.520632 TGTACTAGAGCTGCATCGATTAAC 58.479 41.667 1.02 0.00 0.00 2.01
5113 6428 3.983741 ACTAGAGCTGCATCGATTAACC 58.016 45.455 1.02 0.00 0.00 2.85
5180 6610 6.932400 TGTCTTGTATTCGTCCAATAACTGTT 59.068 34.615 0.00 0.00 0.00 3.16
5360 6790 3.256136 GGTATGCAGCTATACCGAGAACT 59.744 47.826 9.44 0.00 42.15 3.01
5708 7138 8.918116 TGCTAGATAGACTGAAGTTCATACATT 58.082 33.333 5.91 0.00 0.00 2.71
6095 7612 4.965119 ACCACTCATTCTTTTATTCGGC 57.035 40.909 0.00 0.00 0.00 5.54
6251 7768 2.380064 TGGACAAGAACAGGCCAAAT 57.620 45.000 5.01 0.00 0.00 2.32
6632 8149 2.564975 CACGCTTCTCCGTACCGT 59.435 61.111 0.00 0.00 39.83 4.83
6652 8169 1.841556 AGTCTCCAAGGCCCAACGA 60.842 57.895 0.00 0.00 0.00 3.85
6695 8212 4.703575 CCTGTTCATCATGACTGGTTCAAT 59.296 41.667 0.00 0.00 37.92 2.57
6710 8227 1.790755 TCAATGTTGGGTTCTCGTCG 58.209 50.000 0.00 0.00 0.00 5.12
6997 8515 0.181114 TGGTGCATGTATGGCTCTCC 59.819 55.000 0.00 0.00 0.00 3.71
7120 8638 1.279840 CGCAGCGGCCTATTTAAGC 59.720 57.895 7.00 0.00 36.38 3.09
7165 8683 2.115291 GGGCTCGCTTTCATGTCCC 61.115 63.158 0.00 0.00 0.00 4.46
7167 8685 1.741770 GCTCGCTTTCATGTCCCGT 60.742 57.895 0.00 0.00 0.00 5.28
7257 8775 2.626266 TGTGATGTTACCACTGTCTCGT 59.374 45.455 0.00 0.00 35.66 4.18
7292 8810 0.890542 GGTCACATTCAGGCAGCACA 60.891 55.000 0.00 0.00 0.00 4.57
7293 8811 0.239347 GTCACATTCAGGCAGCACAC 59.761 55.000 0.00 0.00 0.00 3.82
7294 8812 1.208358 CACATTCAGGCAGCACACG 59.792 57.895 0.00 0.00 0.00 4.49
7295 8813 1.968017 ACATTCAGGCAGCACACGG 60.968 57.895 0.00 0.00 0.00 4.94
7296 8814 2.360350 ATTCAGGCAGCACACGGG 60.360 61.111 0.00 0.00 0.00 5.28
7297 8815 3.925630 ATTCAGGCAGCACACGGGG 62.926 63.158 0.00 0.00 0.00 5.73
7336 8854 1.267574 ATCATGGCAGTGACCGGAGT 61.268 55.000 9.46 0.00 0.00 3.85
7364 8882 2.029649 CAGGTGGAAATCAAGCACCAAG 60.030 50.000 0.00 0.00 38.32 3.61
7372 8890 5.353123 GGAAATCAAGCACCAAGTTACGATA 59.647 40.000 0.00 0.00 0.00 2.92
7393 8911 7.593644 ACGATAGAAACAAGTAAATTGCCAAAC 59.406 33.333 0.00 0.00 40.66 2.93
7394 8912 7.061789 CGATAGAAACAAGTAAATTGCCAAACC 59.938 37.037 0.00 0.00 40.04 3.27
7395 8913 5.983540 AGAAACAAGTAAATTGCCAAACCA 58.016 33.333 0.00 0.00 43.15 3.67
7396 8914 6.591001 AGAAACAAGTAAATTGCCAAACCAT 58.409 32.000 0.00 0.00 43.15 3.55
7397 8915 7.053498 AGAAACAAGTAAATTGCCAAACCATT 58.947 30.769 0.00 0.00 43.15 3.16
7398 8916 6.616774 AACAAGTAAATTGCCAAACCATTG 57.383 33.333 0.00 0.00 43.15 2.82
7410 8928 3.313690 CAAACCATTGGTTAAACTCCGC 58.686 45.455 21.10 0.00 46.20 5.54
7411 8929 1.541379 ACCATTGGTTAAACTCCGCC 58.459 50.000 1.37 0.00 27.29 6.13
7412 8930 1.202952 ACCATTGGTTAAACTCCGCCA 60.203 47.619 1.37 0.00 27.29 5.69
7413 8931 1.889829 CCATTGGTTAAACTCCGCCAA 59.110 47.619 0.00 0.00 43.95 4.52
7414 8932 6.972583 AAACCATTGGTTAAACTCCGCCAAT 61.973 40.000 21.10 0.00 46.20 3.16
7415 8933 3.697045 CCATTGGTTAAACTCCGCCAATA 59.303 43.478 7.25 0.00 46.39 1.90
7416 8934 4.340950 CCATTGGTTAAACTCCGCCAATAT 59.659 41.667 7.25 0.00 46.39 1.28
7417 8935 5.507315 CCATTGGTTAAACTCCGCCAATATC 60.507 44.000 7.25 0.00 46.39 1.63
7418 8936 3.199677 TGGTTAAACTCCGCCAATATCG 58.800 45.455 0.00 0.00 0.00 2.92
7419 8937 2.032290 GGTTAAACTCCGCCAATATCGC 60.032 50.000 0.00 0.00 0.00 4.58
7420 8938 1.873698 TAAACTCCGCCAATATCGCC 58.126 50.000 0.00 0.00 0.00 5.54
7421 8939 0.180406 AAACTCCGCCAATATCGCCT 59.820 50.000 0.00 0.00 0.00 5.52
7422 8940 0.180406 AACTCCGCCAATATCGCCTT 59.820 50.000 0.00 0.00 0.00 4.35
7423 8941 1.045407 ACTCCGCCAATATCGCCTTA 58.955 50.000 0.00 0.00 0.00 2.69
7424 8942 1.000955 ACTCCGCCAATATCGCCTTAG 59.999 52.381 0.00 0.00 0.00 2.18
7425 8943 1.000955 CTCCGCCAATATCGCCTTAGT 59.999 52.381 0.00 0.00 0.00 2.24
7426 8944 1.000506 TCCGCCAATATCGCCTTAGTC 59.999 52.381 0.00 0.00 0.00 2.59
7427 8945 1.429463 CGCCAATATCGCCTTAGTCC 58.571 55.000 0.00 0.00 0.00 3.85
7428 8946 1.809684 GCCAATATCGCCTTAGTCCC 58.190 55.000 0.00 0.00 0.00 4.46
7429 8947 1.348036 GCCAATATCGCCTTAGTCCCT 59.652 52.381 0.00 0.00 0.00 4.20
7430 8948 2.565834 GCCAATATCGCCTTAGTCCCTA 59.434 50.000 0.00 0.00 0.00 3.53
7431 8949 3.007614 GCCAATATCGCCTTAGTCCCTAA 59.992 47.826 0.00 0.00 0.00 2.69
7432 8950 4.504340 GCCAATATCGCCTTAGTCCCTAAA 60.504 45.833 0.00 0.00 0.00 1.85
7433 8951 5.617252 CCAATATCGCCTTAGTCCCTAAAA 58.383 41.667 0.00 0.00 0.00 1.52
7434 8952 6.059484 CCAATATCGCCTTAGTCCCTAAAAA 58.941 40.000 0.00 0.00 0.00 1.94
7461 8979 2.399916 GCTGAAGGCATCTCAGACTT 57.600 50.000 13.48 0.00 40.27 3.01
7466 8984 3.608316 AAGGCATCTCAGACTTCAGAC 57.392 47.619 0.00 0.00 28.28 3.51
7467 8985 1.830477 AGGCATCTCAGACTTCAGACC 59.170 52.381 0.00 0.00 0.00 3.85
7468 8986 1.470632 GGCATCTCAGACTTCAGACCG 60.471 57.143 0.00 0.00 0.00 4.79
7469 8987 1.474478 GCATCTCAGACTTCAGACCGA 59.526 52.381 0.00 0.00 0.00 4.69
7470 8988 2.100584 GCATCTCAGACTTCAGACCGAT 59.899 50.000 0.00 0.00 0.00 4.18
7471 8989 3.316588 GCATCTCAGACTTCAGACCGATA 59.683 47.826 0.00 0.00 0.00 2.92
7472 8990 4.202060 GCATCTCAGACTTCAGACCGATAA 60.202 45.833 0.00 0.00 0.00 1.75
7473 8991 5.518812 CATCTCAGACTTCAGACCGATAAG 58.481 45.833 0.00 0.00 0.00 1.73
7474 8992 4.590918 TCTCAGACTTCAGACCGATAAGT 58.409 43.478 0.00 0.00 36.20 2.24
7475 8993 4.636648 TCTCAGACTTCAGACCGATAAGTC 59.363 45.833 6.37 6.37 46.10 3.01
7478 8996 4.966965 GACTTCAGACCGATAAGTCTCA 57.033 45.455 7.09 0.00 45.38 3.27
7479 8997 5.508200 GACTTCAGACCGATAAGTCTCAT 57.492 43.478 7.09 0.00 45.38 2.90
7480 8998 5.897050 GACTTCAGACCGATAAGTCTCATT 58.103 41.667 7.09 0.00 45.38 2.57
7481 8999 5.897050 ACTTCAGACCGATAAGTCTCATTC 58.103 41.667 0.00 0.00 45.38 2.67
7482 9000 5.419155 ACTTCAGACCGATAAGTCTCATTCA 59.581 40.000 0.00 0.00 45.38 2.57
7483 9001 6.097554 ACTTCAGACCGATAAGTCTCATTCAT 59.902 38.462 0.00 0.00 45.38 2.57
7484 9002 5.836347 TCAGACCGATAAGTCTCATTCATG 58.164 41.667 0.00 0.00 45.38 3.07
7485 9003 4.447054 CAGACCGATAAGTCTCATTCATGC 59.553 45.833 0.00 0.00 45.38 4.06
7486 9004 3.733337 ACCGATAAGTCTCATTCATGCC 58.267 45.455 0.00 0.00 0.00 4.40
7487 9005 3.134623 ACCGATAAGTCTCATTCATGCCA 59.865 43.478 0.00 0.00 0.00 4.92
7488 9006 4.202398 ACCGATAAGTCTCATTCATGCCAT 60.202 41.667 0.00 0.00 0.00 4.40
7489 9007 4.391216 CCGATAAGTCTCATTCATGCCATC 59.609 45.833 0.00 0.00 0.00 3.51
7490 9008 4.091075 CGATAAGTCTCATTCATGCCATCG 59.909 45.833 0.00 0.00 0.00 3.84
7491 9009 1.590932 AGTCTCATTCATGCCATCGC 58.409 50.000 0.00 0.00 0.00 4.58
7492 9010 1.140452 AGTCTCATTCATGCCATCGCT 59.860 47.619 0.00 0.00 35.36 4.93
7493 9011 1.263484 GTCTCATTCATGCCATCGCTG 59.737 52.381 0.00 0.00 35.36 5.18
7494 9012 1.139455 TCTCATTCATGCCATCGCTGA 59.861 47.619 0.00 0.00 35.36 4.26
7495 9013 1.944709 CTCATTCATGCCATCGCTGAA 59.055 47.619 0.00 1.22 36.91 3.02
7496 9014 2.356695 CTCATTCATGCCATCGCTGAAA 59.643 45.455 2.51 0.00 36.44 2.69
7497 9015 2.953648 TCATTCATGCCATCGCTGAAAT 59.046 40.909 2.51 0.00 36.44 2.17
7498 9016 3.004002 TCATTCATGCCATCGCTGAAATC 59.996 43.478 2.51 0.00 36.44 2.17
7499 9017 2.041251 TCATGCCATCGCTGAAATCA 57.959 45.000 0.00 0.00 35.36 2.57
7500 9018 2.578786 TCATGCCATCGCTGAAATCAT 58.421 42.857 0.00 0.00 35.36 2.45
7501 9019 2.953648 TCATGCCATCGCTGAAATCATT 59.046 40.909 0.00 0.00 35.36 2.57
7502 9020 2.855660 TGCCATCGCTGAAATCATTG 57.144 45.000 0.00 0.00 35.36 2.82
7503 9021 1.202325 TGCCATCGCTGAAATCATTGC 60.202 47.619 0.00 0.00 35.36 3.56
7504 9022 1.866880 GCCATCGCTGAAATCATTGCC 60.867 52.381 0.00 0.00 0.00 4.52
7505 9023 1.406180 CCATCGCTGAAATCATTGCCA 59.594 47.619 0.00 0.00 0.00 4.92
7506 9024 2.159212 CCATCGCTGAAATCATTGCCAA 60.159 45.455 0.00 0.00 0.00 4.52
7507 9025 2.925578 TCGCTGAAATCATTGCCAAG 57.074 45.000 0.00 0.00 0.00 3.61
7508 9026 2.435422 TCGCTGAAATCATTGCCAAGA 58.565 42.857 0.00 0.00 0.00 3.02
7509 9027 3.018856 TCGCTGAAATCATTGCCAAGAT 58.981 40.909 0.00 0.00 0.00 2.40
7510 9028 4.198530 TCGCTGAAATCATTGCCAAGATA 58.801 39.130 0.00 0.00 0.00 1.98
7511 9029 4.639755 TCGCTGAAATCATTGCCAAGATAA 59.360 37.500 0.00 0.00 0.00 1.75
7512 9030 5.300034 TCGCTGAAATCATTGCCAAGATAAT 59.700 36.000 0.00 0.00 0.00 1.28
7513 9031 5.401376 CGCTGAAATCATTGCCAAGATAATG 59.599 40.000 0.00 0.00 36.00 1.90
7514 9032 5.694910 GCTGAAATCATTGCCAAGATAATGG 59.305 40.000 0.00 0.00 43.70 3.16
7524 9042 4.109877 CCAAGATAATGGCCTCATTCCT 57.890 45.455 3.32 0.00 42.16 3.36
7525 9043 4.477249 CCAAGATAATGGCCTCATTCCTT 58.523 43.478 3.32 1.32 42.16 3.36
7526 9044 4.280174 CCAAGATAATGGCCTCATTCCTTG 59.720 45.833 3.32 12.57 43.79 3.61
7527 9045 3.494332 AGATAATGGCCTCATTCCTTGC 58.506 45.455 3.32 0.00 42.16 4.01
7528 9046 2.071778 TAATGGCCTCATTCCTTGCC 57.928 50.000 3.32 0.00 42.16 4.52
7529 9047 0.688749 AATGGCCTCATTCCTTGCCC 60.689 55.000 3.32 0.00 43.35 5.36
7530 9048 2.442830 GGCCTCATTCCTTGCCCC 60.443 66.667 0.00 0.00 37.94 5.80
7531 9049 2.685999 GCCTCATTCCTTGCCCCT 59.314 61.111 0.00 0.00 0.00 4.79
7532 9050 1.454663 GCCTCATTCCTTGCCCCTC 60.455 63.158 0.00 0.00 0.00 4.30
7533 9051 2.001803 CCTCATTCCTTGCCCCTCA 58.998 57.895 0.00 0.00 0.00 3.86
7534 9052 0.554792 CCTCATTCCTTGCCCCTCAT 59.445 55.000 0.00 0.00 0.00 2.90
7535 9053 1.776667 CCTCATTCCTTGCCCCTCATA 59.223 52.381 0.00 0.00 0.00 2.15
7536 9054 2.377869 CCTCATTCCTTGCCCCTCATAT 59.622 50.000 0.00 0.00 0.00 1.78
7537 9055 3.418995 CTCATTCCTTGCCCCTCATATG 58.581 50.000 0.00 0.00 0.00 1.78
7538 9056 3.055328 TCATTCCTTGCCCCTCATATGA 58.945 45.455 5.07 5.07 0.00 2.15
7539 9057 3.462954 TCATTCCTTGCCCCTCATATGAA 59.537 43.478 6.90 0.00 0.00 2.57
7540 9058 3.297134 TTCCTTGCCCCTCATATGAAC 57.703 47.619 6.90 0.00 0.00 3.18
7541 9059 2.204463 TCCTTGCCCCTCATATGAACA 58.796 47.619 6.90 0.44 0.00 3.18
7542 9060 2.580322 TCCTTGCCCCTCATATGAACAA 59.420 45.455 6.90 8.10 0.00 2.83
7543 9061 2.689983 CCTTGCCCCTCATATGAACAAC 59.310 50.000 6.90 0.00 0.00 3.32
7544 9062 2.435372 TGCCCCTCATATGAACAACC 57.565 50.000 6.90 0.00 0.00 3.77
7545 9063 1.922447 TGCCCCTCATATGAACAACCT 59.078 47.619 6.90 0.00 0.00 3.50
7546 9064 2.311542 TGCCCCTCATATGAACAACCTT 59.688 45.455 6.90 0.00 0.00 3.50
7547 9065 2.689983 GCCCCTCATATGAACAACCTTG 59.310 50.000 6.90 0.00 0.00 3.61
7548 9066 3.877735 GCCCCTCATATGAACAACCTTGT 60.878 47.826 6.90 0.00 44.72 3.16
7549 9067 3.947834 CCCCTCATATGAACAACCTTGTC 59.052 47.826 6.90 0.00 41.31 3.18
7550 9068 4.324563 CCCCTCATATGAACAACCTTGTCT 60.325 45.833 6.90 0.00 41.31 3.41
7551 9069 4.878397 CCCTCATATGAACAACCTTGTCTC 59.122 45.833 6.90 0.00 41.31 3.36
7552 9070 4.878397 CCTCATATGAACAACCTTGTCTCC 59.122 45.833 6.90 0.00 41.31 3.71
7553 9071 5.338708 CCTCATATGAACAACCTTGTCTCCT 60.339 44.000 6.90 0.00 41.31 3.69
7554 9072 6.126863 TCATATGAACAACCTTGTCTCCTT 57.873 37.500 1.98 0.00 41.31 3.36
7555 9073 5.939883 TCATATGAACAACCTTGTCTCCTTG 59.060 40.000 1.98 0.00 41.31 3.61
7556 9074 2.930950 TGAACAACCTTGTCTCCTTGG 58.069 47.619 0.00 0.00 41.31 3.61
7557 9075 1.609072 GAACAACCTTGTCTCCTTGGC 59.391 52.381 0.00 0.00 41.31 4.52
7558 9076 0.846693 ACAACCTTGTCTCCTTGGCT 59.153 50.000 0.00 0.00 36.50 4.75
7559 9077 1.202818 ACAACCTTGTCTCCTTGGCTC 60.203 52.381 0.00 0.00 36.50 4.70
7560 9078 1.140312 AACCTTGTCTCCTTGGCTCA 58.860 50.000 0.00 0.00 0.00 4.26
7561 9079 1.140312 ACCTTGTCTCCTTGGCTCAA 58.860 50.000 0.00 0.00 0.00 3.02
7562 9080 1.494721 ACCTTGTCTCCTTGGCTCAAA 59.505 47.619 0.00 0.00 0.00 2.69
7563 9081 2.157738 CCTTGTCTCCTTGGCTCAAAG 58.842 52.381 0.00 0.00 0.00 2.77
7564 9082 1.538950 CTTGTCTCCTTGGCTCAAAGC 59.461 52.381 0.00 0.00 41.46 3.51
7565 9083 0.603707 TGTCTCCTTGGCTCAAAGCG 60.604 55.000 0.00 0.00 43.62 4.68
7566 9084 1.672356 TCTCCTTGGCTCAAAGCGC 60.672 57.895 0.00 0.00 43.62 5.92
7567 9085 1.673665 CTCCTTGGCTCAAAGCGCT 60.674 57.895 2.64 2.64 43.62 5.92
7568 9086 1.228245 TCCTTGGCTCAAAGCGCTT 60.228 52.632 18.98 18.98 43.62 4.68
7569 9087 0.823356 TCCTTGGCTCAAAGCGCTTT 60.823 50.000 29.11 29.11 43.62 3.51
7570 9088 0.881118 CCTTGGCTCAAAGCGCTTTA 59.119 50.000 33.20 20.12 43.62 1.85
7571 9089 1.474077 CCTTGGCTCAAAGCGCTTTAT 59.526 47.619 33.20 12.17 43.62 1.40
7572 9090 2.478539 CCTTGGCTCAAAGCGCTTTATC 60.479 50.000 33.20 23.02 43.62 1.75
7573 9091 1.819928 TGGCTCAAAGCGCTTTATCA 58.180 45.000 33.20 23.58 43.62 2.15
7574 9092 2.158559 TGGCTCAAAGCGCTTTATCAA 58.841 42.857 33.20 18.09 43.62 2.57
7575 9093 2.556189 TGGCTCAAAGCGCTTTATCAAA 59.444 40.909 33.20 17.13 43.62 2.69
7576 9094 3.005261 TGGCTCAAAGCGCTTTATCAAAA 59.995 39.130 33.20 15.62 43.62 2.44
7577 9095 3.987220 GGCTCAAAGCGCTTTATCAAAAA 59.013 39.130 33.20 12.67 43.62 1.94
7578 9096 4.090498 GGCTCAAAGCGCTTTATCAAAAAG 59.910 41.667 33.20 18.85 43.62 2.27
7579 9097 4.917415 GCTCAAAGCGCTTTATCAAAAAGA 59.083 37.500 33.20 21.71 0.00 2.52
7580 9098 5.060200 GCTCAAAGCGCTTTATCAAAAAGAG 59.940 40.000 33.20 28.87 0.00 2.85
7581 9099 6.312399 TCAAAGCGCTTTATCAAAAAGAGA 57.688 33.333 33.20 19.37 30.16 3.10
7582 9100 6.734137 TCAAAGCGCTTTATCAAAAAGAGAA 58.266 32.000 33.20 6.38 30.16 2.87
7583 9101 7.199766 TCAAAGCGCTTTATCAAAAAGAGAAA 58.800 30.769 33.20 1.77 35.23 2.52
7584 9102 6.993175 AAGCGCTTTATCAAAAAGAGAAAC 57.007 33.333 18.98 0.00 32.82 2.78
7585 9103 6.072112 AGCGCTTTATCAAAAAGAGAAACA 57.928 33.333 2.64 0.00 32.82 2.83
7586 9104 6.681777 AGCGCTTTATCAAAAAGAGAAACAT 58.318 32.000 2.64 0.00 32.82 2.71
7587 9105 6.803807 AGCGCTTTATCAAAAAGAGAAACATC 59.196 34.615 2.64 0.00 32.82 3.06
7588 9106 6.033937 GCGCTTTATCAAAAAGAGAAACATCC 59.966 38.462 0.00 0.00 32.82 3.51
7589 9107 7.083858 CGCTTTATCAAAAAGAGAAACATCCA 58.916 34.615 1.78 0.00 32.82 3.41
7590 9108 7.756722 CGCTTTATCAAAAAGAGAAACATCCAT 59.243 33.333 1.78 0.00 32.82 3.41
7591 9109 8.866956 GCTTTATCAAAAAGAGAAACATCCATG 58.133 33.333 1.78 0.00 32.82 3.66
7601 9119 9.484806 AAAGAGAAACATCCATGATAATTTCCT 57.515 29.630 0.00 0.00 31.90 3.36
7602 9120 9.484806 AAGAGAAACATCCATGATAATTTCCTT 57.515 29.630 0.00 3.24 31.90 3.36
7603 9121 9.484806 AGAGAAACATCCATGATAATTTCCTTT 57.515 29.630 0.00 0.00 31.90 3.11
7621 9139 7.865706 TTCCTTTATGTTAGGAATCTTGCTC 57.134 36.000 0.00 0.00 44.72 4.26
7622 9140 6.957631 TCCTTTATGTTAGGAATCTTGCTCA 58.042 36.000 0.00 0.00 38.83 4.26
7623 9141 7.402054 TCCTTTATGTTAGGAATCTTGCTCAA 58.598 34.615 0.00 0.00 38.83 3.02
7624 9142 7.336931 TCCTTTATGTTAGGAATCTTGCTCAAC 59.663 37.037 0.00 0.00 38.83 3.18
7625 9143 6.662414 TTATGTTAGGAATCTTGCTCAACG 57.338 37.500 0.00 0.00 0.00 4.10
7626 9144 2.742053 TGTTAGGAATCTTGCTCAACGC 59.258 45.455 0.00 0.00 39.77 4.84
7627 9145 2.024176 TAGGAATCTTGCTCAACGCC 57.976 50.000 0.00 0.00 38.05 5.68
7628 9146 0.326264 AGGAATCTTGCTCAACGCCT 59.674 50.000 0.00 0.00 38.05 5.52
7629 9147 1.168714 GGAATCTTGCTCAACGCCTT 58.831 50.000 0.00 0.00 38.05 4.35
7630 9148 1.131315 GGAATCTTGCTCAACGCCTTC 59.869 52.381 0.00 0.00 38.05 3.46
7631 9149 1.806542 GAATCTTGCTCAACGCCTTCA 59.193 47.619 0.00 0.00 38.05 3.02
7632 9150 2.119801 ATCTTGCTCAACGCCTTCAT 57.880 45.000 0.00 0.00 38.05 2.57
7633 9151 1.442769 TCTTGCTCAACGCCTTCATC 58.557 50.000 0.00 0.00 38.05 2.92
7634 9152 0.095935 CTTGCTCAACGCCTTCATCG 59.904 55.000 0.00 0.00 38.05 3.84
7635 9153 1.911293 TTGCTCAACGCCTTCATCGC 61.911 55.000 0.00 0.00 38.05 4.58
7636 9154 2.390599 GCTCAACGCCTTCATCGCA 61.391 57.895 0.00 0.00 0.00 5.10
7637 9155 1.911293 GCTCAACGCCTTCATCGCAA 61.911 55.000 0.00 0.00 0.00 4.85
7638 9156 0.179215 CTCAACGCCTTCATCGCAAC 60.179 55.000 0.00 0.00 0.00 4.17
7639 9157 0.882484 TCAACGCCTTCATCGCAACA 60.882 50.000 0.00 0.00 0.00 3.33
7640 9158 0.040514 CAACGCCTTCATCGCAACAA 60.041 50.000 0.00 0.00 0.00 2.83
7641 9159 0.238289 AACGCCTTCATCGCAACAAG 59.762 50.000 0.00 0.00 0.00 3.16
7642 9160 0.602638 ACGCCTTCATCGCAACAAGA 60.603 50.000 0.00 0.00 0.00 3.02
7643 9161 0.516877 CGCCTTCATCGCAACAAGAA 59.483 50.000 0.00 0.00 0.00 2.52
7644 9162 1.464687 CGCCTTCATCGCAACAAGAAG 60.465 52.381 0.00 0.00 37.74 2.85
7645 9163 1.730446 GCCTTCATCGCAACAAGAAGC 60.730 52.381 0.00 0.00 36.91 3.86
7646 9164 1.135575 CCTTCATCGCAACAAGAAGCC 60.136 52.381 0.00 0.00 36.91 4.35
7647 9165 1.536766 CTTCATCGCAACAAGAAGCCA 59.463 47.619 0.00 0.00 32.14 4.75
7648 9166 1.603456 TCATCGCAACAAGAAGCCAA 58.397 45.000 0.00 0.00 0.00 4.52
7649 9167 1.266718 TCATCGCAACAAGAAGCCAAC 59.733 47.619 0.00 0.00 0.00 3.77
7650 9168 0.598065 ATCGCAACAAGAAGCCAACC 59.402 50.000 0.00 0.00 0.00 3.77
7651 9169 0.465460 TCGCAACAAGAAGCCAACCT 60.465 50.000 0.00 0.00 0.00 3.50
7652 9170 0.385390 CGCAACAAGAAGCCAACCTT 59.615 50.000 0.00 0.00 36.19 3.50
7653 9171 1.856802 GCAACAAGAAGCCAACCTTG 58.143 50.000 0.00 0.00 43.84 3.61
7654 9172 1.856802 CAACAAGAAGCCAACCTTGC 58.143 50.000 0.00 0.00 42.46 4.01
7655 9173 1.410153 CAACAAGAAGCCAACCTTGCT 59.590 47.619 0.00 0.00 42.46 3.91
7656 9174 2.622942 CAACAAGAAGCCAACCTTGCTA 59.377 45.455 0.00 0.00 42.46 3.49
7657 9175 3.160679 ACAAGAAGCCAACCTTGCTAT 57.839 42.857 0.00 0.00 42.46 2.97
7658 9176 3.500343 ACAAGAAGCCAACCTTGCTATT 58.500 40.909 0.00 0.00 42.46 1.73
7659 9177 3.897505 ACAAGAAGCCAACCTTGCTATTT 59.102 39.130 0.00 0.00 42.46 1.40
7660 9178 4.240096 CAAGAAGCCAACCTTGCTATTTG 58.760 43.478 0.00 0.00 38.34 2.32
7661 9179 3.766545 AGAAGCCAACCTTGCTATTTGA 58.233 40.909 0.00 0.00 38.34 2.69
7662 9180 3.760684 AGAAGCCAACCTTGCTATTTGAG 59.239 43.478 0.00 0.00 38.34 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 1.111116 TTCGGAGTCCACGACCTGTT 61.111 55.000 10.49 0.00 40.45 3.16
62 63 4.830046 CCCATGCACTACTACTACTCATCT 59.170 45.833 0.00 0.00 0.00 2.90
65 66 4.207955 CTCCCATGCACTACTACTACTCA 58.792 47.826 0.00 0.00 0.00 3.41
115 116 0.991920 GGACAAGGGAGATGGACCAA 59.008 55.000 0.00 0.00 0.00 3.67
243 809 2.799371 CCTACAGCGACTCCCGTC 59.201 66.667 0.00 0.00 41.15 4.79
312 879 6.966021 ACCGAATGATTTTCATATAAACCGG 58.034 36.000 0.00 0.00 35.76 5.28
332 899 9.995957 CAAACATATGAATTACATACAAACCGA 57.004 29.630 10.38 0.00 43.12 4.69
369 937 7.774134 TGGTCATCCAATCATACATTTCAAAG 58.226 34.615 0.00 0.00 41.25 2.77
425 993 1.478631 ATCCGTCAGCTGATCAGTGA 58.521 50.000 21.47 20.43 0.00 3.41
429 997 0.668535 CCGTATCCGTCAGCTGATCA 59.331 55.000 21.47 7.19 0.00 2.92
435 1017 2.282701 TTAACACCGTATCCGTCAGC 57.717 50.000 0.00 0.00 0.00 4.26
437 1019 2.985809 CGTTTTAACACCGTATCCGTCA 59.014 45.455 0.00 0.00 0.00 4.35
841 1585 1.339535 GGAGAAGCAGGGAAGGAACTG 60.340 57.143 0.00 0.00 40.86 3.16
1205 1949 0.527817 GAACGCGATGTGTAGGAGGG 60.528 60.000 15.93 0.00 0.00 4.30
1213 1957 1.136252 CCAGAAAGTGAACGCGATGTG 60.136 52.381 15.93 0.00 0.00 3.21
1235 1979 1.681666 CTGGAGAGCAGGGAAGCAA 59.318 57.895 0.00 0.00 36.85 3.91
1531 2275 0.389426 AACTCATGTACCACCGCGTC 60.389 55.000 4.92 0.00 0.00 5.19
1607 2351 4.982295 GGATGGAAAGTTGCACAGTTTTAC 59.018 41.667 0.00 0.00 0.00 2.01
1709 2453 0.311790 AACCAAAGCGAGACGACGTA 59.688 50.000 0.00 0.00 35.59 3.57
1743 2487 1.146041 GCAGCCCATCACGGATACA 59.854 57.895 0.00 0.00 36.56 2.29
1791 2535 7.855904 CACGCCCTTTTATACTAGCAATTTAAG 59.144 37.037 0.00 0.00 0.00 1.85
1844 2671 0.834612 TCCCCTATTACCAGCAACCG 59.165 55.000 0.00 0.00 0.00 4.44
1884 2711 5.010282 CCTTGCATTTTACCTGAGGTACTT 58.990 41.667 11.63 0.00 41.55 2.24
1924 2751 5.598830 TCCTAATCAGTAATCACCACTCCTC 59.401 44.000 0.00 0.00 0.00 3.71
1965 2792 6.949578 AGCATTGAATTTAACGACATTTGG 57.050 33.333 0.00 0.00 0.00 3.28
1966 2793 8.274939 ACAAAGCATTGAATTTAACGACATTTG 58.725 29.630 8.96 0.00 38.94 2.32
1967 2794 8.364129 ACAAAGCATTGAATTTAACGACATTT 57.636 26.923 8.96 0.00 38.94 2.32
1968 2795 7.945033 ACAAAGCATTGAATTTAACGACATT 57.055 28.000 8.96 0.00 38.94 2.71
1969 2796 8.296713 ACTACAAAGCATTGAATTTAACGACAT 58.703 29.630 8.96 0.00 38.94 3.06
1970 2797 7.589587 CACTACAAAGCATTGAATTTAACGACA 59.410 33.333 8.96 0.00 38.94 4.35
1971 2798 7.060633 CCACTACAAAGCATTGAATTTAACGAC 59.939 37.037 8.96 0.00 38.94 4.34
1972 2799 7.081349 CCACTACAAAGCATTGAATTTAACGA 58.919 34.615 8.96 0.00 38.94 3.85
1973 2800 6.861055 ACCACTACAAAGCATTGAATTTAACG 59.139 34.615 8.96 0.00 38.94 3.18
1974 2801 8.487176 CAACCACTACAAAGCATTGAATTTAAC 58.513 33.333 8.96 0.00 38.94 2.01
1975 2802 8.417106 TCAACCACTACAAAGCATTGAATTTAA 58.583 29.630 8.96 0.00 38.94 1.52
1976 2803 7.946207 TCAACCACTACAAAGCATTGAATTTA 58.054 30.769 8.96 0.00 38.94 1.40
1977 2804 6.815089 TCAACCACTACAAAGCATTGAATTT 58.185 32.000 8.96 0.00 38.94 1.82
1978 2805 6.403866 TCAACCACTACAAAGCATTGAATT 57.596 33.333 8.96 0.00 38.94 2.17
1979 2806 6.403866 TTCAACCACTACAAAGCATTGAAT 57.596 33.333 8.96 0.00 38.94 2.57
1980 2807 5.735922 GCTTCAACCACTACAAAGCATTGAA 60.736 40.000 8.96 0.00 41.46 2.69
1981 2808 4.261572 GCTTCAACCACTACAAAGCATTGA 60.262 41.667 8.96 0.00 41.46 2.57
1982 2809 3.983344 GCTTCAACCACTACAAAGCATTG 59.017 43.478 0.00 0.00 41.46 2.82
1983 2810 3.636300 TGCTTCAACCACTACAAAGCATT 59.364 39.130 4.12 0.00 45.25 3.56
1984 2811 3.221771 TGCTTCAACCACTACAAAGCAT 58.778 40.909 4.12 0.00 45.25 3.79
1986 2813 2.878406 TCTGCTTCAACCACTACAAAGC 59.122 45.455 0.00 0.00 42.02 3.51
1987 2814 4.576463 ACTTCTGCTTCAACCACTACAAAG 59.424 41.667 0.00 0.00 0.00 2.77
1988 2815 4.523083 ACTTCTGCTTCAACCACTACAAA 58.477 39.130 0.00 0.00 0.00 2.83
1989 2816 4.150897 ACTTCTGCTTCAACCACTACAA 57.849 40.909 0.00 0.00 0.00 2.41
1990 2817 3.838244 ACTTCTGCTTCAACCACTACA 57.162 42.857 0.00 0.00 0.00 2.74
1991 2818 3.995048 GGTACTTCTGCTTCAACCACTAC 59.005 47.826 0.00 0.00 0.00 2.73
1992 2819 3.901844 AGGTACTTCTGCTTCAACCACTA 59.098 43.478 0.00 0.00 27.25 2.74
1993 2820 2.706190 AGGTACTTCTGCTTCAACCACT 59.294 45.455 0.00 0.00 27.25 4.00
1994 2821 3.067833 GAGGTACTTCTGCTTCAACCAC 58.932 50.000 0.00 0.00 41.55 4.16
1995 2822 2.703536 TGAGGTACTTCTGCTTCAACCA 59.296 45.455 6.54 0.00 41.55 3.67
1996 2823 3.330267 CTGAGGTACTTCTGCTTCAACC 58.670 50.000 6.54 0.00 41.55 3.77
1997 2824 3.244249 ACCTGAGGTACTTCTGCTTCAAC 60.244 47.826 0.07 0.00 41.55 3.18
1998 2825 2.972713 ACCTGAGGTACTTCTGCTTCAA 59.027 45.455 0.07 0.00 41.55 2.69
1999 2826 2.609747 ACCTGAGGTACTTCTGCTTCA 58.390 47.619 0.07 0.00 41.55 3.02
2000 2827 4.803098 TTACCTGAGGTACTTCTGCTTC 57.197 45.455 11.63 0.00 41.55 3.86
2001 2828 5.562298 TTTTACCTGAGGTACTTCTGCTT 57.438 39.130 11.63 0.00 41.55 3.91
2002 2829 5.491982 CATTTTACCTGAGGTACTTCTGCT 58.508 41.667 11.63 0.00 41.55 4.24
2003 2830 4.095036 GCATTTTACCTGAGGTACTTCTGC 59.905 45.833 11.63 13.65 41.55 4.26
2004 2831 5.245531 TGCATTTTACCTGAGGTACTTCTG 58.754 41.667 11.63 7.92 41.55 3.02
2005 2832 5.499004 TGCATTTTACCTGAGGTACTTCT 57.501 39.130 11.63 0.00 41.55 2.85
2006 2833 5.123979 CCTTGCATTTTACCTGAGGTACTTC 59.876 44.000 11.63 0.00 41.55 3.01
2007 2834 5.010282 CCTTGCATTTTACCTGAGGTACTT 58.990 41.667 11.63 0.00 41.55 2.24
2009 2836 4.156008 CACCTTGCATTTTACCTGAGGTAC 59.844 45.833 11.63 0.00 37.97 3.34
2010 2837 4.042311 TCACCTTGCATTTTACCTGAGGTA 59.958 41.667 7.39 7.39 37.09 3.08
2011 2838 3.157087 CACCTTGCATTTTACCTGAGGT 58.843 45.455 10.00 10.00 40.16 3.85
2012 2839 3.420893 TCACCTTGCATTTTACCTGAGG 58.579 45.455 0.00 0.00 0.00 3.86
2013 2840 4.460382 ACATCACCTTGCATTTTACCTGAG 59.540 41.667 0.00 0.00 0.00 3.35
2014 2841 4.406456 ACATCACCTTGCATTTTACCTGA 58.594 39.130 0.00 0.00 0.00 3.86
2015 2842 4.789012 ACATCACCTTGCATTTTACCTG 57.211 40.909 0.00 0.00 0.00 4.00
2016 2843 5.806654 AAACATCACCTTGCATTTTACCT 57.193 34.783 0.00 0.00 0.00 3.08
2017 2844 5.757808 ACAAAACATCACCTTGCATTTTACC 59.242 36.000 0.00 0.00 0.00 2.85
2018 2845 6.843069 ACAAAACATCACCTTGCATTTTAC 57.157 33.333 0.00 0.00 0.00 2.01
2019 2846 6.238320 GCAACAAAACATCACCTTGCATTTTA 60.238 34.615 0.00 0.00 35.23 1.52
2020 2847 5.448904 GCAACAAAACATCACCTTGCATTTT 60.449 36.000 0.00 0.00 35.23 1.82
2021 2848 4.035441 GCAACAAAACATCACCTTGCATTT 59.965 37.500 0.00 0.00 35.23 2.32
2022 2849 3.560896 GCAACAAAACATCACCTTGCATT 59.439 39.130 0.00 0.00 35.23 3.56
2023 2850 3.132925 GCAACAAAACATCACCTTGCAT 58.867 40.909 0.00 0.00 35.23 3.96
2024 2851 2.168106 AGCAACAAAACATCACCTTGCA 59.832 40.909 0.00 0.00 37.14 4.08
2025 2852 2.540931 CAGCAACAAAACATCACCTTGC 59.459 45.455 0.00 0.00 35.33 4.01
2026 2853 3.125316 CCAGCAACAAAACATCACCTTG 58.875 45.455 0.00 0.00 0.00 3.61
2027 2854 3.030291 TCCAGCAACAAAACATCACCTT 58.970 40.909 0.00 0.00 0.00 3.50
2028 2855 2.624838 CTCCAGCAACAAAACATCACCT 59.375 45.455 0.00 0.00 0.00 4.00
2029 2856 2.288395 CCTCCAGCAACAAAACATCACC 60.288 50.000 0.00 0.00 0.00 4.02
2030 2857 2.622942 TCCTCCAGCAACAAAACATCAC 59.377 45.455 0.00 0.00 0.00 3.06
2031 2858 2.886523 CTCCTCCAGCAACAAAACATCA 59.113 45.455 0.00 0.00 0.00 3.07
2032 2859 2.887152 ACTCCTCCAGCAACAAAACATC 59.113 45.455 0.00 0.00 0.00 3.06
2033 2860 2.624838 CACTCCTCCAGCAACAAAACAT 59.375 45.455 0.00 0.00 0.00 2.71
2034 2861 2.023673 CACTCCTCCAGCAACAAAACA 58.976 47.619 0.00 0.00 0.00 2.83
2035 2862 1.338020 CCACTCCTCCAGCAACAAAAC 59.662 52.381 0.00 0.00 0.00 2.43
2036 2863 1.064017 ACCACTCCTCCAGCAACAAAA 60.064 47.619 0.00 0.00 0.00 2.44
2037 2864 0.550914 ACCACTCCTCCAGCAACAAA 59.449 50.000 0.00 0.00 0.00 2.83
2038 2865 0.179020 CACCACTCCTCCAGCAACAA 60.179 55.000 0.00 0.00 0.00 2.83
2039 2866 1.053835 TCACCACTCCTCCAGCAACA 61.054 55.000 0.00 0.00 0.00 3.33
2040 2867 0.326264 ATCACCACTCCTCCAGCAAC 59.674 55.000 0.00 0.00 0.00 4.17
2041 2868 1.067295 AATCACCACTCCTCCAGCAA 58.933 50.000 0.00 0.00 0.00 3.91
2042 2869 1.555075 GTAATCACCACTCCTCCAGCA 59.445 52.381 0.00 0.00 0.00 4.41
2043 2870 1.834263 AGTAATCACCACTCCTCCAGC 59.166 52.381 0.00 0.00 0.00 4.85
2044 2871 3.099905 TCAGTAATCACCACTCCTCCAG 58.900 50.000 0.00 0.00 0.00 3.86
2045 2872 3.184382 TCAGTAATCACCACTCCTCCA 57.816 47.619 0.00 0.00 0.00 3.86
2046 2873 4.762289 AATCAGTAATCACCACTCCTCC 57.238 45.455 0.00 0.00 0.00 4.30
2047 2874 5.598830 TCCTAATCAGTAATCACCACTCCTC 59.401 44.000 0.00 0.00 0.00 3.71
2048 2875 5.529289 TCCTAATCAGTAATCACCACTCCT 58.471 41.667 0.00 0.00 0.00 3.69
2049 2876 5.221541 CCTCCTAATCAGTAATCACCACTCC 60.222 48.000 0.00 0.00 0.00 3.85
2050 2877 5.598830 TCCTCCTAATCAGTAATCACCACTC 59.401 44.000 0.00 0.00 0.00 3.51
2051 2878 5.529289 TCCTCCTAATCAGTAATCACCACT 58.471 41.667 0.00 0.00 0.00 4.00
2052 2879 5.740513 GCTCCTCCTAATCAGTAATCACCAC 60.741 48.000 0.00 0.00 0.00 4.16
2053 2880 4.345257 GCTCCTCCTAATCAGTAATCACCA 59.655 45.833 0.00 0.00 0.00 4.17
2054 2881 4.591072 AGCTCCTCCTAATCAGTAATCACC 59.409 45.833 0.00 0.00 0.00 4.02
2055 2882 5.303078 TCAGCTCCTCCTAATCAGTAATCAC 59.697 44.000 0.00 0.00 0.00 3.06
2056 2883 5.458595 TCAGCTCCTCCTAATCAGTAATCA 58.541 41.667 0.00 0.00 0.00 2.57
2057 2884 6.412362 TTCAGCTCCTCCTAATCAGTAATC 57.588 41.667 0.00 0.00 0.00 1.75
2058 2885 5.306678 CCTTCAGCTCCTCCTAATCAGTAAT 59.693 44.000 0.00 0.00 0.00 1.89
2059 2886 4.651503 CCTTCAGCTCCTCCTAATCAGTAA 59.348 45.833 0.00 0.00 0.00 2.24
2060 2887 4.219115 CCTTCAGCTCCTCCTAATCAGTA 58.781 47.826 0.00 0.00 0.00 2.74
2061 2888 3.037549 CCTTCAGCTCCTCCTAATCAGT 58.962 50.000 0.00 0.00 0.00 3.41
2062 2889 2.368221 CCCTTCAGCTCCTCCTAATCAG 59.632 54.545 0.00 0.00 0.00 2.90
2063 2890 2.023015 TCCCTTCAGCTCCTCCTAATCA 60.023 50.000 0.00 0.00 0.00 2.57
2064 2891 2.683768 TCCCTTCAGCTCCTCCTAATC 58.316 52.381 0.00 0.00 0.00 1.75
2065 2892 2.877154 TCCCTTCAGCTCCTCCTAAT 57.123 50.000 0.00 0.00 0.00 1.73
2066 2893 2.402564 CATCCCTTCAGCTCCTCCTAA 58.597 52.381 0.00 0.00 0.00 2.69
2067 2894 2.036929 GCATCCCTTCAGCTCCTCCTA 61.037 57.143 0.00 0.00 0.00 2.94
2068 2895 1.344191 GCATCCCTTCAGCTCCTCCT 61.344 60.000 0.00 0.00 0.00 3.69
2069 2896 1.148048 GCATCCCTTCAGCTCCTCC 59.852 63.158 0.00 0.00 0.00 4.30
2070 2897 1.148048 GGCATCCCTTCAGCTCCTC 59.852 63.158 0.00 0.00 0.00 3.71
2071 2898 2.381941 GGGCATCCCTTCAGCTCCT 61.382 63.158 0.00 0.00 41.34 3.69
2072 2899 2.194326 GGGCATCCCTTCAGCTCC 59.806 66.667 0.00 0.00 41.34 4.70
2073 2900 0.323725 TTTGGGCATCCCTTCAGCTC 60.324 55.000 3.27 0.00 45.70 4.09
2074 2901 0.337428 ATTTGGGCATCCCTTCAGCT 59.663 50.000 3.27 0.00 45.70 4.24
2075 2902 0.462789 CATTTGGGCATCCCTTCAGC 59.537 55.000 3.27 0.00 45.70 4.26
2076 2903 1.753073 GACATTTGGGCATCCCTTCAG 59.247 52.381 3.27 0.00 45.70 3.02
2077 2904 1.851304 GACATTTGGGCATCCCTTCA 58.149 50.000 3.27 0.00 45.70 3.02
2078 2905 0.740737 CGACATTTGGGCATCCCTTC 59.259 55.000 3.27 0.00 45.70 3.46
2079 2906 0.039618 ACGACATTTGGGCATCCCTT 59.960 50.000 3.27 0.00 45.70 3.95
2080 2907 0.039618 AACGACATTTGGGCATCCCT 59.960 50.000 3.27 0.00 45.70 4.20
2081 2908 1.757682 TAACGACATTTGGGCATCCC 58.242 50.000 0.00 0.00 45.71 3.85
2082 2909 3.859411 TTTAACGACATTTGGGCATCC 57.141 42.857 0.00 0.00 0.00 3.51
2083 2910 5.406649 TGAATTTAACGACATTTGGGCATC 58.593 37.500 0.00 0.00 0.00 3.91
2084 2911 5.398603 TGAATTTAACGACATTTGGGCAT 57.601 34.783 0.00 0.00 0.00 4.40
2085 2912 4.855715 TGAATTTAACGACATTTGGGCA 57.144 36.364 0.00 0.00 0.00 5.36
2086 2913 5.445806 GCATTGAATTTAACGACATTTGGGC 60.446 40.000 0.00 0.00 0.00 5.36
2087 2914 5.868801 AGCATTGAATTTAACGACATTTGGG 59.131 36.000 0.00 0.00 0.00 4.12
2122 2949 0.637236 GCGTCTAAAAGCGTACGGAC 59.363 55.000 18.39 13.04 35.93 4.79
2123 2950 0.240678 TGCGTCTAAAAGCGTACGGA 59.759 50.000 18.39 1.07 35.93 4.69
2124 2951 1.062258 TTGCGTCTAAAAGCGTACGG 58.938 50.000 18.39 0.00 35.93 4.02
2126 2953 4.828291 TGTATTGCGTCTAAAAGCGTAC 57.172 40.909 0.00 0.00 35.87 3.67
2167 2995 5.334105 GCCTCTAAATATGCATAACACCACG 60.334 44.000 11.13 0.00 0.00 4.94
2211 3039 3.269178 GCTAATAGCCTGAGATGGATGC 58.731 50.000 0.00 0.00 34.48 3.91
2300 3128 2.248280 TAGCGAACCAAAGCAAGACA 57.752 45.000 0.00 0.00 35.48 3.41
2305 3133 1.999735 CGATCTTAGCGAACCAAAGCA 59.000 47.619 0.00 0.00 35.48 3.91
2356 3184 0.960364 GCAGGCTCCCGAAATTGTCA 60.960 55.000 0.00 0.00 0.00 3.58
2560 3388 8.702438 CAAAAACAGACGAGCATTGAATTTAAT 58.298 29.630 0.00 0.00 0.00 1.40
2603 3431 5.629097 CCAAACGGTAATTAATTGTACGCA 58.371 37.500 11.05 0.00 0.00 5.24
2606 3434 5.952033 TGGCCAAACGGTAATTAATTGTAC 58.048 37.500 0.61 1.92 0.00 2.90
2689 3574 4.340263 GAACCCGAAATGTTAAATCTCGC 58.660 43.478 0.00 0.00 0.00 5.03
2705 3590 1.682854 AGCATGCATAAATGGAACCCG 59.317 47.619 21.98 0.00 0.00 5.28
2832 3721 5.951747 ACATAACCATCAATTACAAGCACCT 59.048 36.000 0.00 0.00 0.00 4.00
3134 4025 1.547223 GGATCAGGAATGAGGCCATGG 60.547 57.143 7.63 7.63 32.36 3.66
3146 4452 7.733773 TCTACTTCTTTAATGTGGATCAGGA 57.266 36.000 0.00 0.00 0.00 3.86
3214 4520 1.666209 CTATTTTGCACTGGCCCCCG 61.666 60.000 0.00 0.00 40.13 5.73
3236 4542 7.676893 ACATCTTATATTATGGGACGGAGGTAA 59.323 37.037 0.00 0.00 0.00 2.85
3238 4544 6.023603 ACATCTTATATTATGGGACGGAGGT 58.976 40.000 0.00 0.00 0.00 3.85
3272 4578 5.303589 CCTCCGTCCCACAATATAAGACTAA 59.696 44.000 0.00 0.00 0.00 2.24
3564 4878 0.381801 CACAAGCACACGCCTTTCTT 59.618 50.000 0.00 0.00 39.83 2.52
3607 4921 0.741915 GTTCCAACTTCCAAACGCCA 59.258 50.000 0.00 0.00 0.00 5.69
3627 4941 4.217118 GCAACACTTCATCTCCTGTGAAAT 59.783 41.667 0.00 0.00 35.36 2.17
3630 4944 2.369860 AGCAACACTTCATCTCCTGTGA 59.630 45.455 0.00 0.00 34.81 3.58
3794 5108 2.159310 CCAAACCGCAAGAAACAACAGA 60.159 45.455 0.00 0.00 43.02 3.41
3900 5214 3.006659 ACACACACACAAACAACACAC 57.993 42.857 0.00 0.00 0.00 3.82
3948 5262 4.276678 AGCTACGTATCATTGCATTGCATT 59.723 37.500 12.95 6.17 38.76 3.56
3949 5263 3.817084 AGCTACGTATCATTGCATTGCAT 59.183 39.130 12.95 0.00 38.76 3.96
3950 5264 3.205338 AGCTACGTATCATTGCATTGCA 58.795 40.909 7.38 7.38 36.47 4.08
3951 5265 3.496130 AGAGCTACGTATCATTGCATTGC 59.504 43.478 0.46 0.46 0.00 3.56
3952 5266 5.464722 AGAAGAGCTACGTATCATTGCATTG 59.535 40.000 0.00 2.08 0.00 2.82
4029 5343 5.912396 GCTGACAGTCTCTCATATAAAGTCG 59.088 44.000 3.99 0.00 0.00 4.18
4030 5344 6.040391 AGGCTGACAGTCTCTCATATAAAGTC 59.960 42.308 3.00 0.00 0.00 3.01
4059 5373 6.443792 AGCAAAAACTTAATGGGACTAAACG 58.556 36.000 0.00 0.00 0.00 3.60
4104 5418 2.555325 TGAGCAAAACATCAGAAGCTGG 59.445 45.455 0.00 0.00 31.61 4.85
4223 5538 7.308951 CCCGACAACTATGATTTACCTTTTTGT 60.309 37.037 0.00 0.00 0.00 2.83
4422 5737 0.951558 CACAACCAAAACCTCCCTCG 59.048 55.000 0.00 0.00 0.00 4.63
4838 6153 4.963318 AGATGTCCTGACAGAGTGAAAA 57.037 40.909 3.32 0.00 45.48 2.29
4885 6200 9.905713 AAGAGTAGAAGAAAAATATGCCATGTA 57.094 29.630 0.00 0.00 0.00 2.29
4886 6201 8.814038 AAGAGTAGAAGAAAAATATGCCATGT 57.186 30.769 0.00 0.00 0.00 3.21
4929 6244 7.792374 AGTAACGAATAATACCTACGAGTCA 57.208 36.000 0.00 0.00 0.00 3.41
4956 6271 9.827411 GAATAAAAAGTTAGGAGTAGCAAACAG 57.173 33.333 0.00 0.00 0.00 3.16
4991 6306 7.061557 GTCAAATTTAGCACAGAAGCAGAATTC 59.938 37.037 0.00 0.00 33.28 2.17
5002 6317 5.108385 AGGTTTCGTCAAATTTAGCACAG 57.892 39.130 0.00 0.00 0.00 3.66
5084 6399 3.733224 CGATGCAGCTCTAGTACAACATC 59.267 47.826 0.00 0.00 0.00 3.06
5085 6400 3.381590 TCGATGCAGCTCTAGTACAACAT 59.618 43.478 0.00 0.00 0.00 2.71
5086 6401 2.752903 TCGATGCAGCTCTAGTACAACA 59.247 45.455 0.00 0.00 0.00 3.33
5087 6402 3.422417 TCGATGCAGCTCTAGTACAAC 57.578 47.619 0.00 0.00 0.00 3.32
5088 6403 4.655762 AATCGATGCAGCTCTAGTACAA 57.344 40.909 0.00 0.00 0.00 2.41
5089 6404 5.507482 GGTTAATCGATGCAGCTCTAGTACA 60.507 44.000 0.00 0.00 0.00 2.90
5090 6405 4.918583 GGTTAATCGATGCAGCTCTAGTAC 59.081 45.833 0.00 0.00 0.00 2.73
5091 6406 4.827835 AGGTTAATCGATGCAGCTCTAGTA 59.172 41.667 0.00 0.00 0.00 1.82
5092 6407 3.639094 AGGTTAATCGATGCAGCTCTAGT 59.361 43.478 0.00 0.00 0.00 2.57
5093 6408 3.986572 CAGGTTAATCGATGCAGCTCTAG 59.013 47.826 0.00 0.00 0.00 2.43
5094 6409 3.636764 TCAGGTTAATCGATGCAGCTCTA 59.363 43.478 0.00 0.00 0.00 2.43
5106 6421 3.388350 ACTCCCTCCGATTCAGGTTAATC 59.612 47.826 0.00 0.00 33.37 1.75
5112 6427 2.074729 ACTACTCCCTCCGATTCAGG 57.925 55.000 0.00 0.00 0.00 3.86
5113 6428 4.473477 AAAACTACTCCCTCCGATTCAG 57.527 45.455 0.00 0.00 0.00 3.02
5346 6776 8.894731 TCATAGATTATCAGTTCTCGGTATAGC 58.105 37.037 0.00 0.00 0.00 2.97
5353 6783 9.852091 TGAATGATCATAGATTATCAGTTCTCG 57.148 33.333 9.04 0.00 35.67 4.04
5392 6822 8.356657 TGGAAATAAATGTATAAGAAATGGGCG 58.643 33.333 0.00 0.00 0.00 6.13
5708 7138 2.873472 ACGCATTGTTTGTCGGTTAAGA 59.127 40.909 0.00 0.00 31.79 2.10
5713 7143 2.550606 ACATAACGCATTGTTTGTCGGT 59.449 40.909 0.00 0.00 42.09 4.69
5904 7421 5.348418 CACATGGAGTGCCTTAAATATCG 57.652 43.478 0.00 0.00 42.15 2.92
6095 7612 3.619038 GGGAATTCAACAAGCTACTCGAG 59.381 47.826 11.84 11.84 0.00 4.04
6251 7768 0.251297 CAACCAGATTGTGCTCCCCA 60.251 55.000 0.00 0.00 33.20 4.96
6317 7834 1.424302 CCCTCTAGACGGGGATCTACA 59.576 57.143 10.98 0.00 45.18 2.74
6632 8149 1.761174 GTTGGGCCTTGGAGACTGA 59.239 57.895 4.53 0.00 0.00 3.41
6652 8169 2.224548 GGTGAGTCTTAGGGCTGTTTGT 60.225 50.000 0.00 0.00 0.00 2.83
6695 8212 1.006571 GCTCGACGAGAACCCAACA 60.007 57.895 28.43 0.00 0.00 3.33
6710 8227 1.678101 GCCATTTACCCATCAGTGCTC 59.322 52.381 0.00 0.00 0.00 4.26
6997 8515 6.428385 AAATCTGCTCTGAATAAGAAACGG 57.572 37.500 0.00 0.00 33.37 4.44
7103 8621 0.308993 CAGCTTAAATAGGCCGCTGC 59.691 55.000 12.64 4.99 41.15 5.25
7105 8623 0.107214 TGCAGCTTAAATAGGCCGCT 60.107 50.000 0.00 0.00 33.46 5.52
7106 8624 0.954452 ATGCAGCTTAAATAGGCCGC 59.046 50.000 0.00 0.00 32.98 6.53
7107 8625 1.949525 ACATGCAGCTTAAATAGGCCG 59.050 47.619 0.00 0.00 0.00 6.13
7108 8626 2.544486 GCACATGCAGCTTAAATAGGCC 60.544 50.000 0.00 0.00 41.59 5.19
7120 8638 1.611977 CCCCATCAATAGCACATGCAG 59.388 52.381 6.64 0.00 45.16 4.41
7165 8683 5.036737 GGATTTGATCTGGCAAATGTAACG 58.963 41.667 7.02 0.00 45.63 3.18
7167 8685 6.795144 ATGGATTTGATCTGGCAAATGTAA 57.205 33.333 7.02 0.00 45.63 2.41
7257 8775 2.502130 GTGACCCACCCAAAAAGGAAAA 59.498 45.455 0.00 0.00 41.22 2.29
7336 8854 5.357878 GTGCTTGATTTCCACCTGATATTCA 59.642 40.000 0.00 0.00 0.00 2.57
7364 8882 8.231837 TGGCAATTTACTTGTTTCTATCGTAAC 58.768 33.333 0.00 0.00 37.18 2.50
7372 8890 5.983540 TGGTTTGGCAATTTACTTGTTTCT 58.016 33.333 0.00 0.00 37.18 2.52
7393 8911 1.540267 TGGCGGAGTTTAACCAATGG 58.460 50.000 0.00 0.00 0.00 3.16
7396 8914 3.623960 CGATATTGGCGGAGTTTAACCAA 59.376 43.478 0.00 0.00 45.68 3.67
7397 8915 3.199677 CGATATTGGCGGAGTTTAACCA 58.800 45.455 0.00 0.00 0.00 3.67
7398 8916 2.032290 GCGATATTGGCGGAGTTTAACC 60.032 50.000 0.00 0.00 0.00 2.85
7399 8917 2.032290 GGCGATATTGGCGGAGTTTAAC 60.032 50.000 0.00 0.00 0.00 2.01
7400 8918 2.158871 AGGCGATATTGGCGGAGTTTAA 60.159 45.455 10.69 0.00 39.82 1.52
7401 8919 1.414919 AGGCGATATTGGCGGAGTTTA 59.585 47.619 10.69 0.00 39.82 2.01
7402 8920 0.180406 AGGCGATATTGGCGGAGTTT 59.820 50.000 10.69 0.00 39.82 2.66
7403 8921 0.180406 AAGGCGATATTGGCGGAGTT 59.820 50.000 10.69 0.00 39.82 3.01
7404 8922 1.000955 CTAAGGCGATATTGGCGGAGT 59.999 52.381 10.69 1.44 39.82 3.85
7405 8923 1.000955 ACTAAGGCGATATTGGCGGAG 59.999 52.381 10.69 13.28 39.82 4.63
7406 8924 1.000506 GACTAAGGCGATATTGGCGGA 59.999 52.381 10.69 2.54 39.82 5.54
7407 8925 1.429463 GACTAAGGCGATATTGGCGG 58.571 55.000 10.69 7.94 39.82 6.13
7408 8926 1.429463 GGACTAAGGCGATATTGGCG 58.571 55.000 10.69 0.10 39.82 5.69
7409 8927 1.348036 AGGGACTAAGGCGATATTGGC 59.652 52.381 8.49 8.49 36.02 4.52
7442 8960 2.278854 GAAGTCTGAGATGCCTTCAGC 58.721 52.381 6.47 0.00 44.14 4.26
7443 8961 3.606595 TGAAGTCTGAGATGCCTTCAG 57.393 47.619 9.20 3.54 38.61 3.02
7444 8962 3.056250 GTCTGAAGTCTGAGATGCCTTCA 60.056 47.826 11.84 11.84 40.57 3.02
7445 8963 3.520569 GTCTGAAGTCTGAGATGCCTTC 58.479 50.000 4.80 4.80 35.11 3.46
7446 8964 2.235898 GGTCTGAAGTCTGAGATGCCTT 59.764 50.000 0.00 0.00 0.00 4.35
7447 8965 1.830477 GGTCTGAAGTCTGAGATGCCT 59.170 52.381 0.00 0.00 0.00 4.75
7448 8966 1.470632 CGGTCTGAAGTCTGAGATGCC 60.471 57.143 0.00 0.00 0.00 4.40
7449 8967 1.474478 TCGGTCTGAAGTCTGAGATGC 59.526 52.381 0.00 0.00 0.00 3.91
7450 8968 5.067153 ACTTATCGGTCTGAAGTCTGAGATG 59.933 44.000 0.00 0.00 0.00 2.90
7451 8969 5.197451 ACTTATCGGTCTGAAGTCTGAGAT 58.803 41.667 0.00 0.00 0.00 2.75
7452 8970 4.590918 ACTTATCGGTCTGAAGTCTGAGA 58.409 43.478 0.00 0.00 0.00 3.27
7453 8971 4.915704 GACTTATCGGTCTGAAGTCTGAG 58.084 47.826 3.10 0.00 43.71 3.35
7454 8972 4.966965 GACTTATCGGTCTGAAGTCTGA 57.033 45.455 3.10 0.00 43.71 3.27
7457 8975 4.966965 TGAGACTTATCGGTCTGAAGTC 57.033 45.455 2.19 2.19 45.32 3.01
7458 8976 5.419155 TGAATGAGACTTATCGGTCTGAAGT 59.581 40.000 1.71 0.00 45.32 3.01
7459 8977 5.895928 TGAATGAGACTTATCGGTCTGAAG 58.104 41.667 1.71 0.00 45.32 3.02
7460 8978 5.914898 TGAATGAGACTTATCGGTCTGAA 57.085 39.130 1.71 0.00 45.32 3.02
7461 8979 5.737349 GCATGAATGAGACTTATCGGTCTGA 60.737 44.000 0.00 0.00 45.32 3.27
7462 8980 4.447054 GCATGAATGAGACTTATCGGTCTG 59.553 45.833 0.00 0.00 45.32 3.51
7464 8982 3.743396 GGCATGAATGAGACTTATCGGTC 59.257 47.826 0.00 0.00 36.56 4.79
7465 8983 3.134623 TGGCATGAATGAGACTTATCGGT 59.865 43.478 0.00 0.00 0.00 4.69
7466 8984 3.732212 TGGCATGAATGAGACTTATCGG 58.268 45.455 0.00 0.00 0.00 4.18
7467 8985 4.091075 CGATGGCATGAATGAGACTTATCG 59.909 45.833 3.81 0.00 0.00 2.92
7468 8986 4.142945 GCGATGGCATGAATGAGACTTATC 60.143 45.833 3.81 0.00 39.62 1.75
7469 8987 3.750130 GCGATGGCATGAATGAGACTTAT 59.250 43.478 3.81 0.00 39.62 1.73
7470 8988 3.133691 GCGATGGCATGAATGAGACTTA 58.866 45.455 3.81 0.00 39.62 2.24
7471 8989 1.945394 GCGATGGCATGAATGAGACTT 59.055 47.619 3.81 0.00 39.62 3.01
7472 8990 1.140452 AGCGATGGCATGAATGAGACT 59.860 47.619 3.81 0.00 43.41 3.24
7473 8991 1.263484 CAGCGATGGCATGAATGAGAC 59.737 52.381 3.81 0.00 43.41 3.36
7474 8992 1.139455 TCAGCGATGGCATGAATGAGA 59.861 47.619 3.81 0.00 43.41 3.27
7475 8993 1.589803 TCAGCGATGGCATGAATGAG 58.410 50.000 3.81 0.00 43.41 2.90
7476 8994 2.041251 TTCAGCGATGGCATGAATGA 57.959 45.000 3.81 2.66 43.41 2.57
7477 8995 2.855660 TTTCAGCGATGGCATGAATG 57.144 45.000 3.81 0.00 43.41 2.67
7478 8996 2.953648 TGATTTCAGCGATGGCATGAAT 59.046 40.909 3.81 5.24 43.41 2.57
7479 8997 2.367486 TGATTTCAGCGATGGCATGAA 58.633 42.857 3.81 0.00 43.41 2.57
7480 8998 2.041251 TGATTTCAGCGATGGCATGA 57.959 45.000 3.81 0.00 43.41 3.07
7481 8999 3.049912 CAATGATTTCAGCGATGGCATG 58.950 45.455 3.81 0.00 43.41 4.06
7482 9000 2.545113 GCAATGATTTCAGCGATGGCAT 60.545 45.455 0.00 0.00 43.41 4.40
7483 9001 1.202325 GCAATGATTTCAGCGATGGCA 60.202 47.619 0.00 0.00 43.41 4.92
7484 9002 1.484356 GCAATGATTTCAGCGATGGC 58.516 50.000 0.00 0.00 40.37 4.40
7485 9003 1.406180 TGGCAATGATTTCAGCGATGG 59.594 47.619 0.00 0.00 0.00 3.51
7486 9004 2.855660 TGGCAATGATTTCAGCGATG 57.144 45.000 0.00 0.00 0.00 3.84
7487 9005 3.018856 TCTTGGCAATGATTTCAGCGAT 58.981 40.909 0.00 0.00 0.00 4.58
7488 9006 2.435422 TCTTGGCAATGATTTCAGCGA 58.565 42.857 0.00 0.00 0.00 4.93
7489 9007 2.925578 TCTTGGCAATGATTTCAGCG 57.074 45.000 0.00 0.00 0.00 5.18
7490 9008 5.694910 CCATTATCTTGGCAATGATTTCAGC 59.305 40.000 14.42 0.00 34.69 4.26
7503 9021 4.109877 AGGAATGAGGCCATTATCTTGG 57.890 45.455 5.01 0.00 42.66 3.61
7504 9022 4.261909 GCAAGGAATGAGGCCATTATCTTG 60.262 45.833 22.18 22.18 45.06 3.02
7505 9023 3.893813 GCAAGGAATGAGGCCATTATCTT 59.106 43.478 5.01 2.09 42.66 2.40
7506 9024 3.494332 GCAAGGAATGAGGCCATTATCT 58.506 45.455 5.01 0.00 42.66 1.98
7507 9025 2.560105 GGCAAGGAATGAGGCCATTATC 59.440 50.000 5.01 0.00 45.70 1.75
7508 9026 2.601905 GGCAAGGAATGAGGCCATTAT 58.398 47.619 5.01 0.00 45.70 1.28
7509 9027 2.071778 GGCAAGGAATGAGGCCATTA 57.928 50.000 5.01 0.00 45.70 1.90
7510 9028 2.906268 GGCAAGGAATGAGGCCATT 58.094 52.632 5.01 0.00 45.70 3.16
7511 9029 4.692930 GGCAAGGAATGAGGCCAT 57.307 55.556 5.01 0.00 45.70 4.40
7513 9031 2.442830 GGGGCAAGGAATGAGGCC 60.443 66.667 0.00 0.00 46.34 5.19
7514 9032 1.454663 GAGGGGCAAGGAATGAGGC 60.455 63.158 0.00 0.00 0.00 4.70
7515 9033 0.554792 ATGAGGGGCAAGGAATGAGG 59.445 55.000 0.00 0.00 0.00 3.86
7516 9034 3.073503 TCATATGAGGGGCAAGGAATGAG 59.926 47.826 0.00 0.00 0.00 2.90
7517 9035 3.055328 TCATATGAGGGGCAAGGAATGA 58.945 45.455 0.00 0.00 0.00 2.57
7518 9036 3.513909 TCATATGAGGGGCAAGGAATG 57.486 47.619 0.00 0.00 0.00 2.67
7519 9037 3.205056 TGTTCATATGAGGGGCAAGGAAT 59.795 43.478 5.39 0.00 0.00 3.01
7520 9038 2.580322 TGTTCATATGAGGGGCAAGGAA 59.420 45.455 5.39 0.00 0.00 3.36
7521 9039 2.204463 TGTTCATATGAGGGGCAAGGA 58.796 47.619 5.39 0.00 0.00 3.36
7522 9040 2.689983 GTTGTTCATATGAGGGGCAAGG 59.310 50.000 5.39 0.00 0.00 3.61
7523 9041 2.689983 GGTTGTTCATATGAGGGGCAAG 59.310 50.000 5.39 0.00 0.00 4.01
7524 9042 2.311542 AGGTTGTTCATATGAGGGGCAA 59.688 45.455 5.39 7.55 0.00 4.52
7525 9043 1.922447 AGGTTGTTCATATGAGGGGCA 59.078 47.619 5.39 1.92 0.00 5.36
7526 9044 2.689983 CAAGGTTGTTCATATGAGGGGC 59.310 50.000 5.39 0.00 0.00 5.80
7527 9045 3.947834 GACAAGGTTGTTCATATGAGGGG 59.052 47.826 5.39 0.00 42.43 4.79
7528 9046 4.848357 AGACAAGGTTGTTCATATGAGGG 58.152 43.478 5.39 0.00 42.43 4.30
7529 9047 4.878397 GGAGACAAGGTTGTTCATATGAGG 59.122 45.833 5.39 0.00 42.43 3.86
7530 9048 5.738909 AGGAGACAAGGTTGTTCATATGAG 58.261 41.667 5.39 0.00 42.43 2.90
7531 9049 5.762179 AGGAGACAAGGTTGTTCATATGA 57.238 39.130 0.00 0.00 42.43 2.15
7532 9050 5.124457 CCAAGGAGACAAGGTTGTTCATATG 59.876 44.000 0.00 0.00 42.43 1.78
7533 9051 5.256474 CCAAGGAGACAAGGTTGTTCATAT 58.744 41.667 0.00 0.00 42.43 1.78
7534 9052 4.651778 CCAAGGAGACAAGGTTGTTCATA 58.348 43.478 0.00 0.00 42.43 2.15
7535 9053 3.490348 CCAAGGAGACAAGGTTGTTCAT 58.510 45.455 0.00 0.00 42.43 2.57
7536 9054 2.930950 CCAAGGAGACAAGGTTGTTCA 58.069 47.619 0.00 0.00 42.43 3.18
7537 9055 1.609072 GCCAAGGAGACAAGGTTGTTC 59.391 52.381 0.00 0.00 42.43 3.18
7538 9056 1.215423 AGCCAAGGAGACAAGGTTGTT 59.785 47.619 0.00 0.00 42.43 2.83
7539 9057 0.846693 AGCCAAGGAGACAAGGTTGT 59.153 50.000 0.00 0.00 45.65 3.32
7540 9058 1.202806 TGAGCCAAGGAGACAAGGTTG 60.203 52.381 0.00 0.00 0.00 3.77
7541 9059 1.140312 TGAGCCAAGGAGACAAGGTT 58.860 50.000 0.00 0.00 0.00 3.50
7542 9060 1.140312 TTGAGCCAAGGAGACAAGGT 58.860 50.000 0.00 0.00 0.00 3.50
7543 9061 2.157738 CTTTGAGCCAAGGAGACAAGG 58.842 52.381 0.00 0.00 0.00 3.61
7544 9062 1.538950 GCTTTGAGCCAAGGAGACAAG 59.461 52.381 2.03 0.00 34.48 3.16
7545 9063 1.609208 GCTTTGAGCCAAGGAGACAA 58.391 50.000 2.03 0.00 34.48 3.18
7546 9064 0.603707 CGCTTTGAGCCAAGGAGACA 60.604 55.000 2.03 0.00 38.18 3.41
7547 9065 1.916697 GCGCTTTGAGCCAAGGAGAC 61.917 60.000 0.00 0.00 38.18 3.36
7548 9066 1.672356 GCGCTTTGAGCCAAGGAGA 60.672 57.895 0.00 0.00 38.18 3.71
7549 9067 1.239968 AAGCGCTTTGAGCCAAGGAG 61.240 55.000 18.98 0.24 38.18 3.69
7550 9068 0.823356 AAAGCGCTTTGAGCCAAGGA 60.823 50.000 33.24 0.00 38.18 3.36
7551 9069 0.881118 TAAAGCGCTTTGAGCCAAGG 59.119 50.000 38.60 0.00 38.18 3.61
7552 9070 2.162208 TGATAAAGCGCTTTGAGCCAAG 59.838 45.455 38.60 0.00 38.18 3.61
7553 9071 2.158559 TGATAAAGCGCTTTGAGCCAA 58.841 42.857 38.60 22.19 38.18 4.52
7554 9072 1.819928 TGATAAAGCGCTTTGAGCCA 58.180 45.000 38.60 26.94 38.18 4.75
7555 9073 2.919666 TTGATAAAGCGCTTTGAGCC 57.080 45.000 38.60 25.10 38.18 4.70
7556 9074 4.917415 TCTTTTTGATAAAGCGCTTTGAGC 59.083 37.500 38.60 27.53 38.02 4.26
7557 9075 6.373779 TCTCTTTTTGATAAAGCGCTTTGAG 58.626 36.000 38.60 30.94 34.23 3.02
7558 9076 6.312399 TCTCTTTTTGATAAAGCGCTTTGA 57.688 33.333 38.60 24.91 34.23 2.69
7559 9077 6.991485 TTCTCTTTTTGATAAAGCGCTTTG 57.009 33.333 38.60 22.43 34.23 2.77
7560 9078 6.978080 TGTTTCTCTTTTTGATAAAGCGCTTT 59.022 30.769 35.20 35.20 36.63 3.51
7561 9079 6.503524 TGTTTCTCTTTTTGATAAAGCGCTT 58.496 32.000 18.98 18.98 0.00 4.68
7562 9080 6.072112 TGTTTCTCTTTTTGATAAAGCGCT 57.928 33.333 2.64 2.64 0.00 5.92
7563 9081 6.033937 GGATGTTTCTCTTTTTGATAAAGCGC 59.966 38.462 0.00 0.00 0.00 5.92
7564 9082 7.083858 TGGATGTTTCTCTTTTTGATAAAGCG 58.916 34.615 0.00 0.00 0.00 4.68
7565 9083 8.866956 CATGGATGTTTCTCTTTTTGATAAAGC 58.133 33.333 0.00 0.00 0.00 3.51
7575 9093 9.484806 AGGAAATTATCATGGATGTTTCTCTTT 57.515 29.630 13.56 0.00 33.13 2.52
7576 9094 9.484806 AAGGAAATTATCATGGATGTTTCTCTT 57.515 29.630 13.56 12.36 33.13 2.85
7577 9095 9.484806 AAAGGAAATTATCATGGATGTTTCTCT 57.515 29.630 13.56 9.23 33.13 3.10
7598 9116 6.957631 TGAGCAAGATTCCTAACATAAAGGA 58.042 36.000 0.00 0.00 41.47 3.36
7599 9117 7.475840 GTTGAGCAAGATTCCTAACATAAAGG 58.524 38.462 0.00 0.00 35.26 3.11
7600 9118 7.182761 CGTTGAGCAAGATTCCTAACATAAAG 58.817 38.462 0.00 0.00 0.00 1.85
7601 9119 7.072177 CGTTGAGCAAGATTCCTAACATAAA 57.928 36.000 0.00 0.00 0.00 1.40
7602 9120 6.662414 CGTTGAGCAAGATTCCTAACATAA 57.338 37.500 0.00 0.00 0.00 1.90
7619 9137 0.179215 GTTGCGATGAAGGCGTTGAG 60.179 55.000 0.00 0.00 0.00 3.02
7620 9138 0.882484 TGTTGCGATGAAGGCGTTGA 60.882 50.000 0.00 0.00 0.00 3.18
7621 9139 0.040514 TTGTTGCGATGAAGGCGTTG 60.041 50.000 0.00 0.00 0.00 4.10
7622 9140 0.238289 CTTGTTGCGATGAAGGCGTT 59.762 50.000 0.00 0.00 0.00 4.84
7623 9141 0.602638 TCTTGTTGCGATGAAGGCGT 60.603 50.000 0.00 0.00 0.00 5.68
7624 9142 0.516877 TTCTTGTTGCGATGAAGGCG 59.483 50.000 0.00 0.00 0.00 5.52
7625 9143 1.730446 GCTTCTTGTTGCGATGAAGGC 60.730 52.381 12.91 5.44 37.12 4.35
7626 9144 1.135575 GGCTTCTTGTTGCGATGAAGG 60.136 52.381 12.91 1.07 37.12 3.46
7627 9145 1.536766 TGGCTTCTTGTTGCGATGAAG 59.463 47.619 8.89 8.89 38.96 3.02
7628 9146 1.603456 TGGCTTCTTGTTGCGATGAA 58.397 45.000 0.00 0.00 0.00 2.57
7629 9147 1.266718 GTTGGCTTCTTGTTGCGATGA 59.733 47.619 0.00 0.00 0.00 2.92
7630 9148 1.666888 GGTTGGCTTCTTGTTGCGATG 60.667 52.381 0.00 0.00 0.00 3.84
7631 9149 0.598065 GGTTGGCTTCTTGTTGCGAT 59.402 50.000 0.00 0.00 0.00 4.58
7632 9150 0.465460 AGGTTGGCTTCTTGTTGCGA 60.465 50.000 0.00 0.00 0.00 5.10
7633 9151 0.385390 AAGGTTGGCTTCTTGTTGCG 59.615 50.000 0.00 0.00 0.00 4.85
7634 9152 1.856802 CAAGGTTGGCTTCTTGTTGC 58.143 50.000 0.00 0.00 36.54 4.17
7635 9153 1.410153 AGCAAGGTTGGCTTCTTGTTG 59.590 47.619 13.39 0.00 41.56 3.33
7636 9154 1.780503 AGCAAGGTTGGCTTCTTGTT 58.219 45.000 13.39 7.40 41.56 2.83
7637 9155 2.656947 TAGCAAGGTTGGCTTCTTGT 57.343 45.000 13.39 6.32 42.62 3.16
7638 9156 4.022068 TCAAATAGCAAGGTTGGCTTCTTG 60.022 41.667 9.50 9.50 42.62 3.02
7639 9157 4.151883 TCAAATAGCAAGGTTGGCTTCTT 58.848 39.130 0.00 0.00 42.62 2.52
7640 9158 3.760684 CTCAAATAGCAAGGTTGGCTTCT 59.239 43.478 0.00 0.00 42.62 2.85
7641 9159 4.102035 CTCAAATAGCAAGGTTGGCTTC 57.898 45.455 0.00 0.00 42.62 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.