Multiple sequence alignment - TraesCS3D01G213100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G213100 chr3D 100.000 8578 0 0 1 8578 287060844 287052267 0.000000e+00 15841
1 TraesCS3D01G213100 chr3B 95.240 5861 148 24 2407 8184 379999904 379994092 0.000000e+00 9156
2 TraesCS3D01G213100 chr3B 94.659 2434 85 23 4 2415 380002339 379999929 0.000000e+00 3733
3 TraesCS3D01G213100 chr3A 94.528 4331 136 34 2408 6667 375822699 375818399 0.000000e+00 6591
4 TraesCS3D01G213100 chr3A 91.806 2453 137 30 2 2415 375825152 375822725 0.000000e+00 3358
5 TraesCS3D01G213100 chr3A 96.113 1492 52 5 6664 8154 375818243 375816757 0.000000e+00 2429
6 TraesCS3D01G213100 chr1A 94.350 177 7 2 8176 8350 26491466 26491641 1.420000e-67 268


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G213100 chr3D 287052267 287060844 8577 True 15841.0 15841 100.0000 1 8578 1 chr3D.!!$R1 8577
1 TraesCS3D01G213100 chr3B 379994092 380002339 8247 True 6444.5 9156 94.9495 4 8184 2 chr3B.!!$R1 8180
2 TraesCS3D01G213100 chr3A 375816757 375825152 8395 True 4126.0 6591 94.1490 2 8154 3 chr3A.!!$R1 8152

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 447 0.528470 CTTGTGGAGACGGAGGAGTC 59.472 60.000 0.00 0.0 41.23 3.36 F
437 450 0.528470 GTGGAGACGGAGGAGTCAAG 59.472 60.000 0.00 0.0 43.24 3.02 F
528 541 0.817654 ACGATGAAGACGATGGAGCA 59.182 50.000 0.00 0.0 34.70 4.26 F
1565 1601 2.294449 AGCTGTTCCTCCTTTTTCCC 57.706 50.000 0.00 0.0 0.00 3.97 F
2656 2739 0.478072 TGGCATCCAGTGTTCCTTGT 59.522 50.000 0.00 0.0 0.00 3.16 F
3481 3583 3.306641 GGTTTGGTTAATCAAGGCATGCA 60.307 43.478 21.36 0.0 0.00 3.96 F
4289 4402 1.005215 CCTTTCAGCAGGGAAGTCCAT 59.995 52.381 0.00 0.0 38.24 3.41 F
5157 5307 0.538746 GGTGTGGTTACCTGGGGTTG 60.539 60.000 2.07 0.0 37.09 3.77 F
5762 5917 2.761786 ATACCCCATCATGCTTTGCT 57.238 45.000 0.00 0.0 0.00 3.91 F
7328 7672 0.462759 CTGAAGCTTCACCCGATCCC 60.463 60.000 25.16 0.0 32.90 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1251 1278 1.063912 CGAGCTCGCCAATGCAAAATA 59.936 47.619 25.07 0.00 37.32 1.40 R
1524 1551 1.228063 CTGGCACACTGTTCCAGCT 60.228 57.895 14.03 0.00 39.72 4.24 R
2182 2227 3.064271 GCGACTGTGTTTCCTTTACAACA 59.936 43.478 0.00 0.00 0.00 3.33 R
3481 3583 1.406069 CGCATGAAAGCTAGACCCAGT 60.406 52.381 0.00 0.00 0.00 4.00 R
3603 3707 0.580104 GGTCGACAAGTTGGACAACG 59.420 55.000 18.91 5.29 45.50 4.10 R
4613 4754 1.338105 GCCAATCTTTTTGGGTCCAGC 60.338 52.381 6.51 0.00 39.90 4.85 R
5762 5917 1.140852 ACAGTAGGCTGCACACAAGAA 59.859 47.619 5.14 0.00 46.30 2.52 R
6012 6167 1.355381 TCTGTCTGCCATTCAACCCAT 59.645 47.619 0.00 0.00 0.00 4.00 R
7339 7683 0.674581 CGAGCCAGCCAAATCACTCA 60.675 55.000 0.00 0.00 0.00 3.41 R
8214 8566 0.026285 CGCGGCTGATTTACGGAAAG 59.974 55.000 0.00 0.00 0.00 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 3.385115 TGATTCCTCTCCTCCTTTACCC 58.615 50.000 0.00 0.00 0.00 3.69
71 72 2.105134 TCCTTTACCCGTGTGATGTGTT 59.895 45.455 0.00 0.00 0.00 3.32
73 74 3.058501 CCTTTACCCGTGTGATGTGTTTC 60.059 47.826 0.00 0.00 0.00 2.78
74 75 3.478857 TTACCCGTGTGATGTGTTTCT 57.521 42.857 0.00 0.00 0.00 2.52
89 90 4.518590 TGTGTTTCTCTCTCTCTCTCACTG 59.481 45.833 0.00 0.00 0.00 3.66
90 91 4.078537 TGTTTCTCTCTCTCTCTCACTGG 58.921 47.826 0.00 0.00 0.00 4.00
91 92 3.364460 TTCTCTCTCTCTCTCACTGGG 57.636 52.381 0.00 0.00 0.00 4.45
92 93 1.064758 TCTCTCTCTCTCTCACTGGGC 60.065 57.143 0.00 0.00 0.00 5.36
107 117 1.069090 GGGCGTGTGTGTGAGAGAA 59.931 57.895 0.00 0.00 0.00 2.87
189 202 0.984230 TTAGGTGACTGCTTCCCTGG 59.016 55.000 0.00 0.00 43.88 4.45
221 234 1.450491 CCGCTCCTCTCTCGAGACA 60.450 63.158 12.08 0.00 39.74 3.41
224 237 1.388547 GCTCCTCTCTCGAGACATGT 58.611 55.000 12.08 0.00 39.74 3.21
407 420 3.305773 GCACTCGTCGCGTCGATC 61.306 66.667 27.02 15.79 38.42 3.69
434 447 0.528470 CTTGTGGAGACGGAGGAGTC 59.472 60.000 0.00 0.00 41.23 3.36
437 450 0.528470 GTGGAGACGGAGGAGTCAAG 59.472 60.000 0.00 0.00 43.24 3.02
471 484 3.004839 GCAAGAGGGAAGAAACAAAGGTC 59.995 47.826 0.00 0.00 0.00 3.85
482 495 1.071471 CAAAGGTCAGGGTGCGAGT 59.929 57.895 0.00 0.00 0.00 4.18
488 501 2.131067 TCAGGGTGCGAGTGTGTGA 61.131 57.895 0.00 0.00 0.00 3.58
510 523 3.054065 ACTGATGGAGAAGGGGAATCAAC 60.054 47.826 0.00 0.00 0.00 3.18
515 528 2.170607 GGAGAAGGGGAATCAACGATGA 59.829 50.000 0.00 0.00 40.57 2.92
528 541 0.817654 ACGATGAAGACGATGGAGCA 59.182 50.000 0.00 0.00 34.70 4.26
573 586 9.399797 TCTTCATTATTAGTACGTGAGGAGTTA 57.600 33.333 0.00 0.00 0.00 2.24
581 594 9.715121 ATTAGTACGTGAGGAGTTAAAATCAAA 57.285 29.630 0.00 0.00 0.00 2.69
582 595 9.715121 TTAGTACGTGAGGAGTTAAAATCAAAT 57.285 29.630 0.00 0.00 0.00 2.32
583 596 8.252964 AGTACGTGAGGAGTTAAAATCAAATC 57.747 34.615 0.00 0.00 0.00 2.17
584 597 6.165659 ACGTGAGGAGTTAAAATCAAATCG 57.834 37.500 0.00 0.00 0.00 3.34
585 598 5.699458 ACGTGAGGAGTTAAAATCAAATCGT 59.301 36.000 0.00 0.00 0.00 3.73
586 599 6.015504 CGTGAGGAGTTAAAATCAAATCGTG 58.984 40.000 0.00 0.00 0.00 4.35
587 600 5.795441 GTGAGGAGTTAAAATCAAATCGTGC 59.205 40.000 0.00 0.00 0.00 5.34
588 601 4.969816 AGGAGTTAAAATCAAATCGTGCG 58.030 39.130 0.00 0.00 0.00 5.34
589 602 4.454504 AGGAGTTAAAATCAAATCGTGCGT 59.545 37.500 0.00 0.00 0.00 5.24
590 603 4.553429 GGAGTTAAAATCAAATCGTGCGTG 59.447 41.667 0.00 0.00 0.00 5.34
630 643 4.302559 AGAGAAGGTTGAACCATTACCC 57.697 45.455 17.83 0.55 41.95 3.69
634 647 4.227527 AGAAGGTTGAACCATTACCCCTAG 59.772 45.833 17.83 0.00 41.95 3.02
636 649 4.180723 AGGTTGAACCATTACCCCTAGAA 58.819 43.478 17.83 0.00 41.95 2.10
638 651 5.255443 AGGTTGAACCATTACCCCTAGAAAT 59.745 40.000 17.83 0.00 41.95 2.17
639 652 5.593095 GGTTGAACCATTACCCCTAGAAATC 59.407 44.000 9.98 0.00 38.42 2.17
640 653 6.184789 GTTGAACCATTACCCCTAGAAATCA 58.815 40.000 0.00 0.00 0.00 2.57
641 654 6.001449 TGAACCATTACCCCTAGAAATCAG 57.999 41.667 0.00 0.00 0.00 2.90
642 655 5.491078 TGAACCATTACCCCTAGAAATCAGT 59.509 40.000 0.00 0.00 0.00 3.41
726 748 2.592861 GACCCATCGCCATCTGCC 60.593 66.667 0.00 0.00 36.24 4.85
1099 1126 2.493675 CTCTCTCAGATTGGTTCGTCCA 59.506 50.000 0.00 0.00 45.60 4.02
1251 1278 3.319904 GCGACTGCGAGTTGTGTT 58.680 55.556 0.00 0.00 40.82 3.32
1428 1455 3.732721 GCAAAGCTGCTGTGTTTCTAAAG 59.267 43.478 20.32 0.00 45.74 1.85
1524 1551 8.597662 ACTTACGCTGTTTTATGAAGAACTTA 57.402 30.769 0.00 0.00 0.00 2.24
1565 1601 2.294449 AGCTGTTCCTCCTTTTTCCC 57.706 50.000 0.00 0.00 0.00 3.97
1726 1763 5.748402 TCAATCATCCAAACTCAGCTGTAT 58.252 37.500 14.67 0.00 0.00 2.29
2130 2172 7.067494 ACCTTACTATTCATTTTCATCCTGTGC 59.933 37.037 0.00 0.00 0.00 4.57
2144 2189 5.187772 TCATCCTGTGCACTAGAGTAACAAT 59.812 40.000 19.41 0.00 0.00 2.71
2182 2227 4.815533 TTCTCTTGAGATAGCTGCAACT 57.184 40.909 1.02 0.00 0.00 3.16
2338 2383 7.401080 CAGAATTTGTAGTTTGTTTTTGGCAG 58.599 34.615 0.00 0.00 0.00 4.85
2497 2576 5.566230 GCAAAGAAGTGAATCTGATGCCTTT 60.566 40.000 0.00 0.00 37.23 3.11
2498 2577 6.453092 CAAAGAAGTGAATCTGATGCCTTTT 58.547 36.000 0.00 0.00 0.00 2.27
2565 2646 4.111916 CAAATTGGCACGTTGAGTTTTCT 58.888 39.130 3.75 0.00 0.00 2.52
2656 2739 0.478072 TGGCATCCAGTGTTCCTTGT 59.522 50.000 0.00 0.00 0.00 3.16
2666 2749 6.931838 TCCAGTGTTCCTTGTACTTATACTG 58.068 40.000 0.00 0.00 34.40 2.74
2711 2795 6.620678 TGCTTGAAATATTTTGTGTAGCCTC 58.379 36.000 1.43 0.00 0.00 4.70
2765 2849 5.818336 TCGTTATGTTGTTGAAGAAGTTCCA 59.182 36.000 0.00 0.00 0.00 3.53
2867 2951 9.753674 TGAGTTTCCTCCTTTGTATAAATTCAT 57.246 29.630 0.00 0.00 36.86 2.57
3250 3334 5.930569 TCTGATGTTGAGACTTCATCTTGTG 59.069 40.000 13.41 0.00 38.70 3.33
3481 3583 3.306641 GGTTTGGTTAATCAAGGCATGCA 60.307 43.478 21.36 0.00 0.00 3.96
3717 3824 1.226746 GCTACAGTTGGTTGACGCTT 58.773 50.000 0.00 0.00 0.00 4.68
4099 4208 7.483059 GTTTCTAGCAGAAATTTGACATACTGC 59.517 37.037 15.75 15.75 44.94 4.40
4222 4331 3.935828 GCAGTCCAAGGTCTCAATCTTAC 59.064 47.826 0.00 0.00 0.00 2.34
4226 4335 4.389077 GTCCAAGGTCTCAATCTTACAACG 59.611 45.833 0.00 0.00 0.00 4.10
4241 4350 5.703592 TCTTACAACGTTATTGCCTTCACAT 59.296 36.000 0.00 0.00 0.00 3.21
4289 4402 1.005215 CCTTTCAGCAGGGAAGTCCAT 59.995 52.381 0.00 0.00 38.24 3.41
4290 4403 2.556114 CCTTTCAGCAGGGAAGTCCATT 60.556 50.000 0.00 0.00 38.24 3.16
4291 4404 2.978156 TTCAGCAGGGAAGTCCATTT 57.022 45.000 0.00 0.00 38.24 2.32
4292 4405 2.978156 TCAGCAGGGAAGTCCATTTT 57.022 45.000 0.00 0.00 38.24 1.82
4293 4406 3.243359 TCAGCAGGGAAGTCCATTTTT 57.757 42.857 0.00 0.00 38.24 1.94
4495 4636 5.529581 TGGTTTTCCTTTTTGGATCTGAC 57.470 39.130 0.00 0.00 45.68 3.51
4613 4754 6.185852 TCATTGTCAGTGTGCATATCTTTG 57.814 37.500 0.00 0.00 0.00 2.77
4794 4935 9.052365 ACCTTCTTCCTTAATCAATTCTAGACT 57.948 33.333 0.00 0.00 0.00 3.24
4795 4936 9.898152 CCTTCTTCCTTAATCAATTCTAGACTT 57.102 33.333 0.00 0.00 0.00 3.01
4907 5052 4.530553 TGCTCAACTTATTGGACACCTCTA 59.469 41.667 0.00 0.00 36.39 2.43
4986 5131 3.081710 TCGACTGAAGGTACTGGATGA 57.918 47.619 0.00 0.00 40.86 2.92
5000 5145 3.379372 ACTGGATGATGCAAATCCTTTCG 59.621 43.478 24.57 15.70 43.52 3.46
5157 5307 0.538746 GGTGTGGTTACCTGGGGTTG 60.539 60.000 2.07 0.00 37.09 3.77
5293 5443 6.260870 TGCTCTTAAATTTCGGCAATGTTA 57.739 33.333 0.00 0.00 0.00 2.41
5662 5814 3.088532 TGGTAAAATTCTTGCTGCCGAT 58.911 40.909 0.00 0.00 0.00 4.18
5762 5917 2.761786 ATACCCCATCATGCTTTGCT 57.238 45.000 0.00 0.00 0.00 3.91
6012 6167 5.617528 TGTTTGAGTAGGGTAACAGTGAA 57.382 39.130 0.00 0.00 39.74 3.18
6143 6298 7.539712 TGCTTTCATTTTCTCTAAGTATCGG 57.460 36.000 0.00 0.00 0.00 4.18
6310 6465 5.363562 TGATGACATTGAAGAGGTATGCT 57.636 39.130 0.00 0.00 0.00 3.79
6368 6541 4.439700 CCCTGCATCTTGCTATTGTTTCTG 60.440 45.833 0.75 0.00 45.31 3.02
6385 6558 7.864108 TGTTTCTGCTGCTGTATTGTATATT 57.136 32.000 0.00 0.00 0.00 1.28
6458 6631 4.327357 CACTTGAACGTGATGATGAGGTAC 59.673 45.833 0.00 0.00 37.06 3.34
6470 6643 9.378551 GTGATGATGAGGTACATTTAAGTAACA 57.621 33.333 0.00 0.00 39.56 2.41
6589 6772 6.264744 AGCCGACTATAAAGTATGAACTGCTA 59.735 38.462 0.00 0.00 35.56 3.49
6645 6828 6.900186 ACATTATGGTTGGTTTATCCATGGAA 59.100 34.615 20.67 5.49 46.60 3.53
6672 7014 4.552166 AATGCACCGACAAGTATATTGC 57.448 40.909 0.00 0.00 0.00 3.56
6836 7180 5.184671 GCACCCTTGATTTTTCTCTCTTGAT 59.815 40.000 0.00 0.00 0.00 2.57
6896 7240 5.385198 AGCAGTTCCCTCTTTACAAATTCA 58.615 37.500 0.00 0.00 0.00 2.57
6959 7303 1.944177 TAGCTGCCTCTGTTCCTTCT 58.056 50.000 0.00 0.00 0.00 2.85
6995 7339 1.225704 GGAGGCTTCCCCAGACATG 59.774 63.158 2.75 0.00 37.53 3.21
7182 7526 4.427312 GCATCCAGATGTTTCAATTGGTC 58.573 43.478 5.42 0.00 40.80 4.02
7328 7672 0.462759 CTGAAGCTTCACCCGATCCC 60.463 60.000 25.16 0.00 32.90 3.85
7339 7683 0.106708 CCCGATCCCGATGTCAATGT 59.893 55.000 0.00 0.00 38.22 2.71
7386 7730 0.319900 TTCTGAGCAAGCTGTCCGTC 60.320 55.000 0.00 0.00 0.00 4.79
7391 7735 1.738099 GCAAGCTGTCCGTCACGAT 60.738 57.895 0.00 0.00 0.00 3.73
7392 7736 1.291877 GCAAGCTGTCCGTCACGATT 61.292 55.000 0.00 0.00 0.00 3.34
7438 7782 5.069318 TGATGCAGTTGTGGATACTGAAAA 58.931 37.500 7.15 0.00 44.52 2.29
7579 7923 3.305199 GCAGCAGAAGCAAAAGAGTGAAT 60.305 43.478 0.00 0.00 45.49 2.57
7846 8190 1.276140 TACCCTCCGTTTCATGGGGG 61.276 60.000 5.99 0.00 45.01 5.40
8058 8410 5.578336 CGATGTGCTTCAGTTCAAATAGAGA 59.422 40.000 0.00 0.00 0.00 3.10
8133 8485 2.869801 TCCAGCTTGTTAAACACGTCTG 59.130 45.455 0.00 0.00 0.00 3.51
8154 8506 3.017442 GTTTCTTGACCAGCTATTCCCC 58.983 50.000 0.00 0.00 0.00 4.81
8159 8511 2.840511 TGACCAGCTATTCCCCAACTA 58.159 47.619 0.00 0.00 0.00 2.24
8184 8536 5.689514 TGTTGTTCCGATGCAAAATTTAGTG 59.310 36.000 0.00 0.00 0.00 2.74
8185 8537 4.804108 TGTTCCGATGCAAAATTTAGTGG 58.196 39.130 0.00 0.00 0.00 4.00
8186 8538 4.520874 TGTTCCGATGCAAAATTTAGTGGA 59.479 37.500 0.00 0.00 0.00 4.02
8187 8539 5.010112 TGTTCCGATGCAAAATTTAGTGGAA 59.990 36.000 0.00 0.00 0.00 3.53
8188 8540 5.713792 TCCGATGCAAAATTTAGTGGAAA 57.286 34.783 0.00 0.00 0.00 3.13
8189 8541 6.090483 TCCGATGCAAAATTTAGTGGAAAA 57.910 33.333 0.00 0.00 0.00 2.29
8190 8542 5.923684 TCCGATGCAAAATTTAGTGGAAAAC 59.076 36.000 0.00 0.00 0.00 2.43
8191 8543 5.694006 CCGATGCAAAATTTAGTGGAAAACA 59.306 36.000 0.00 0.00 0.00 2.83
8203 8555 3.632189 GTGGAAAACACTTGATGTCAGC 58.368 45.455 0.00 0.00 46.72 4.26
8204 8556 2.622942 TGGAAAACACTTGATGTCAGCC 59.377 45.455 0.00 0.00 42.31 4.85
8205 8557 2.350772 GGAAAACACTTGATGTCAGCCG 60.351 50.000 0.00 0.00 42.31 5.52
8206 8558 1.238439 AAACACTTGATGTCAGCCGG 58.762 50.000 0.00 0.00 42.31 6.13
8207 8559 0.396435 AACACTTGATGTCAGCCGGA 59.604 50.000 5.05 0.00 42.31 5.14
8208 8560 0.615331 ACACTTGATGTCAGCCGGAT 59.385 50.000 5.05 0.00 36.54 4.18
8209 8561 1.012086 CACTTGATGTCAGCCGGATG 58.988 55.000 15.12 15.12 0.00 3.51
8210 8562 0.904649 ACTTGATGTCAGCCGGATGA 59.095 50.000 20.59 20.59 0.00 2.92
8211 8563 1.487976 ACTTGATGTCAGCCGGATGAT 59.512 47.619 27.42 11.21 0.00 2.45
8212 8564 2.092753 ACTTGATGTCAGCCGGATGATT 60.093 45.455 27.42 16.74 0.00 2.57
8213 8565 2.715749 TGATGTCAGCCGGATGATTT 57.284 45.000 27.42 16.35 0.00 2.17
8214 8566 2.564771 TGATGTCAGCCGGATGATTTC 58.435 47.619 27.42 23.71 0.00 2.17
8215 8567 2.171237 TGATGTCAGCCGGATGATTTCT 59.829 45.455 27.42 10.75 0.00 2.52
8216 8568 2.787473 TGTCAGCCGGATGATTTCTT 57.213 45.000 27.42 0.00 0.00 2.52
8217 8569 3.071874 TGTCAGCCGGATGATTTCTTT 57.928 42.857 27.42 0.00 0.00 2.52
8218 8570 3.009723 TGTCAGCCGGATGATTTCTTTC 58.990 45.455 27.42 11.54 0.00 2.62
8219 8571 2.356069 GTCAGCCGGATGATTTCTTTCC 59.644 50.000 27.42 6.28 0.00 3.13
8220 8572 1.331756 CAGCCGGATGATTTCTTTCCG 59.668 52.381 16.48 12.61 42.91 4.30
8221 8573 1.065418 AGCCGGATGATTTCTTTCCGT 60.065 47.619 5.05 2.67 41.84 4.69
8222 8574 2.169769 AGCCGGATGATTTCTTTCCGTA 59.830 45.455 5.05 0.00 41.84 4.02
8223 8575 2.940410 GCCGGATGATTTCTTTCCGTAA 59.060 45.455 5.05 0.00 41.84 3.18
8224 8576 3.375922 GCCGGATGATTTCTTTCCGTAAA 59.624 43.478 5.05 0.00 41.84 2.01
8225 8577 4.036380 GCCGGATGATTTCTTTCCGTAAAT 59.964 41.667 5.05 0.00 41.84 1.40
8226 8578 5.748592 CCGGATGATTTCTTTCCGTAAATC 58.251 41.667 0.00 0.00 41.84 2.17
8230 8582 5.560966 TGATTTCTTTCCGTAAATCAGCC 57.439 39.130 6.42 0.00 43.59 4.85
8231 8583 4.094294 TGATTTCTTTCCGTAAATCAGCCG 59.906 41.667 6.42 0.00 43.59 5.52
8232 8584 1.365699 TCTTTCCGTAAATCAGCCGC 58.634 50.000 0.00 0.00 0.00 6.53
8233 8585 0.026285 CTTTCCGTAAATCAGCCGCG 59.974 55.000 0.00 0.00 0.00 6.46
8234 8586 0.671163 TTTCCGTAAATCAGCCGCGT 60.671 50.000 4.92 0.00 0.00 6.01
8235 8587 1.079875 TTCCGTAAATCAGCCGCGTC 61.080 55.000 4.92 0.00 0.00 5.19
8236 8588 2.522638 CCGTAAATCAGCCGCGTCC 61.523 63.158 4.92 0.00 0.00 4.79
8237 8589 2.522638 CGTAAATCAGCCGCGTCCC 61.523 63.158 4.92 0.00 0.00 4.46
8238 8590 1.153429 GTAAATCAGCCGCGTCCCT 60.153 57.895 4.92 0.00 0.00 4.20
8239 8591 1.153449 TAAATCAGCCGCGTCCCTG 60.153 57.895 4.92 8.84 0.00 4.45
8240 8592 2.587322 TAAATCAGCCGCGTCCCTGG 62.587 60.000 4.92 0.00 0.00 4.45
8254 8606 3.788766 CTGGCTTGCCACGCGTAC 61.789 66.667 13.44 8.16 0.00 3.67
8265 8617 2.505557 CGCGTACGTGGTCCCTTC 60.506 66.667 20.84 0.00 33.53 3.46
8266 8618 2.125793 GCGTACGTGGTCCCTTCC 60.126 66.667 17.90 0.00 0.00 3.46
8267 8619 2.575461 CGTACGTGGTCCCTTCCC 59.425 66.667 7.22 0.00 0.00 3.97
8268 8620 1.980772 CGTACGTGGTCCCTTCCCT 60.981 63.158 7.22 0.00 0.00 4.20
8269 8621 1.895966 GTACGTGGTCCCTTCCCTC 59.104 63.158 0.00 0.00 0.00 4.30
8270 8622 0.901580 GTACGTGGTCCCTTCCCTCA 60.902 60.000 0.00 0.00 0.00 3.86
8271 8623 0.901580 TACGTGGTCCCTTCCCTCAC 60.902 60.000 0.00 0.00 0.00 3.51
8272 8624 1.913762 CGTGGTCCCTTCCCTCACT 60.914 63.158 0.00 0.00 0.00 3.41
8273 8625 1.481056 CGTGGTCCCTTCCCTCACTT 61.481 60.000 0.00 0.00 0.00 3.16
8274 8626 0.771755 GTGGTCCCTTCCCTCACTTT 59.228 55.000 0.00 0.00 0.00 2.66
8275 8627 1.982958 GTGGTCCCTTCCCTCACTTTA 59.017 52.381 0.00 0.00 0.00 1.85
8276 8628 1.982958 TGGTCCCTTCCCTCACTTTAC 59.017 52.381 0.00 0.00 0.00 2.01
8277 8629 1.066358 GGTCCCTTCCCTCACTTTACG 60.066 57.143 0.00 0.00 0.00 3.18
8278 8630 1.622312 GTCCCTTCCCTCACTTTACGT 59.378 52.381 0.00 0.00 0.00 3.57
8279 8631 2.038164 GTCCCTTCCCTCACTTTACGTT 59.962 50.000 0.00 0.00 0.00 3.99
8280 8632 2.707257 TCCCTTCCCTCACTTTACGTTT 59.293 45.455 0.00 0.00 0.00 3.60
8281 8633 3.072211 CCCTTCCCTCACTTTACGTTTC 58.928 50.000 0.00 0.00 0.00 2.78
8282 8634 3.244457 CCCTTCCCTCACTTTACGTTTCT 60.244 47.826 0.00 0.00 0.00 2.52
8283 8635 3.746492 CCTTCCCTCACTTTACGTTTCTG 59.254 47.826 0.00 0.00 0.00 3.02
8284 8636 4.377897 CTTCCCTCACTTTACGTTTCTGT 58.622 43.478 0.00 0.00 0.00 3.41
8285 8637 5.510179 CCTTCCCTCACTTTACGTTTCTGTA 60.510 44.000 0.00 0.00 0.00 2.74
8286 8638 5.130292 TCCCTCACTTTACGTTTCTGTAG 57.870 43.478 0.00 0.00 0.00 2.74
8287 8639 3.678548 CCCTCACTTTACGTTTCTGTAGC 59.321 47.826 0.00 0.00 0.00 3.58
8288 8640 3.364023 CCTCACTTTACGTTTCTGTAGCG 59.636 47.826 0.00 0.00 0.00 4.26
8289 8641 4.224433 CTCACTTTACGTTTCTGTAGCGA 58.776 43.478 0.00 0.00 0.00 4.93
8290 8642 4.801891 TCACTTTACGTTTCTGTAGCGAT 58.198 39.130 0.00 0.00 0.00 4.58
8291 8643 5.224888 TCACTTTACGTTTCTGTAGCGATT 58.775 37.500 0.00 0.00 0.00 3.34
8292 8644 5.118050 TCACTTTACGTTTCTGTAGCGATTG 59.882 40.000 0.00 0.00 0.00 2.67
8293 8645 5.118050 CACTTTACGTTTCTGTAGCGATTGA 59.882 40.000 0.00 0.00 0.00 2.57
8294 8646 5.118203 ACTTTACGTTTCTGTAGCGATTGAC 59.882 40.000 0.00 0.00 0.00 3.18
8295 8647 2.334838 ACGTTTCTGTAGCGATTGACC 58.665 47.619 0.00 0.00 0.00 4.02
8296 8648 2.029290 ACGTTTCTGTAGCGATTGACCT 60.029 45.455 0.00 0.00 0.00 3.85
8297 8649 2.993899 CGTTTCTGTAGCGATTGACCTT 59.006 45.455 0.00 0.00 0.00 3.50
8298 8650 3.060895 CGTTTCTGTAGCGATTGACCTTC 59.939 47.826 0.00 0.00 0.00 3.46
8299 8651 4.246458 GTTTCTGTAGCGATTGACCTTCT 58.754 43.478 0.00 0.00 0.00 2.85
8300 8652 5.408356 GTTTCTGTAGCGATTGACCTTCTA 58.592 41.667 0.00 0.00 0.00 2.10
8301 8653 4.902443 TCTGTAGCGATTGACCTTCTAG 57.098 45.455 0.00 0.00 0.00 2.43
8302 8654 3.066900 TCTGTAGCGATTGACCTTCTAGC 59.933 47.826 0.00 0.00 0.00 3.42
8303 8655 2.223502 TGTAGCGATTGACCTTCTAGCG 60.224 50.000 0.00 0.00 34.45 4.26
8304 8656 0.103208 AGCGATTGACCTTCTAGCGG 59.897 55.000 0.00 0.00 32.20 5.52
8305 8657 0.179108 GCGATTGACCTTCTAGCGGT 60.179 55.000 3.51 3.51 32.20 5.68
8311 8663 2.785713 GACCTTCTAGCGGTCTGATC 57.214 55.000 18.46 0.00 45.87 2.92
8312 8664 1.338655 GACCTTCTAGCGGTCTGATCC 59.661 57.143 18.46 0.00 45.87 3.36
8320 8672 3.917760 GGTCTGATCCGGCCCGAG 61.918 72.222 3.71 0.00 0.00 4.63
8321 8673 4.593864 GTCTGATCCGGCCCGAGC 62.594 72.222 3.71 2.08 38.76 5.03
8345 8697 2.281761 CACAGCGCTCCCAGGTTT 60.282 61.111 7.13 0.00 0.00 3.27
8346 8698 1.003839 CACAGCGCTCCCAGGTTTA 60.004 57.895 7.13 0.00 0.00 2.01
8347 8699 1.003718 ACAGCGCTCCCAGGTTTAC 60.004 57.895 7.13 0.00 0.00 2.01
8348 8700 1.003839 CAGCGCTCCCAGGTTTACA 60.004 57.895 7.13 0.00 0.00 2.41
8349 8701 0.392998 CAGCGCTCCCAGGTTTACAT 60.393 55.000 7.13 0.00 0.00 2.29
8350 8702 0.392998 AGCGCTCCCAGGTTTACATG 60.393 55.000 2.64 0.00 0.00 3.21
8351 8703 1.993369 GCGCTCCCAGGTTTACATGC 61.993 60.000 0.00 0.00 0.00 4.06
8352 8704 1.376609 CGCTCCCAGGTTTACATGCC 61.377 60.000 0.00 0.00 0.00 4.40
8353 8705 0.034089 GCTCCCAGGTTTACATGCCT 60.034 55.000 0.00 0.00 35.04 4.75
8354 8706 1.616994 GCTCCCAGGTTTACATGCCTT 60.617 52.381 0.00 0.00 31.73 4.35
8355 8707 2.807676 CTCCCAGGTTTACATGCCTTT 58.192 47.619 0.00 0.00 31.73 3.11
8356 8708 3.165071 CTCCCAGGTTTACATGCCTTTT 58.835 45.455 0.00 0.00 31.73 2.27
8357 8709 3.578282 CTCCCAGGTTTACATGCCTTTTT 59.422 43.478 0.00 0.00 31.73 1.94
8377 8729 5.910637 TTTTACGTGTGTGGACATCTTAC 57.089 39.130 0.00 0.00 33.63 2.34
8378 8730 4.587584 TTACGTGTGTGGACATCTTACA 57.412 40.909 0.00 0.00 33.63 2.41
8379 8731 2.750948 ACGTGTGTGGACATCTTACAC 58.249 47.619 10.85 10.85 43.67 2.90
8380 8732 2.364324 ACGTGTGTGGACATCTTACACT 59.636 45.455 15.72 0.84 43.73 3.55
8381 8733 2.987149 CGTGTGTGGACATCTTACACTC 59.013 50.000 15.72 12.67 43.73 3.51
8382 8734 3.326747 GTGTGTGGACATCTTACACTCC 58.673 50.000 15.72 7.43 43.73 3.85
8383 8735 3.006967 GTGTGTGGACATCTTACACTCCT 59.993 47.826 15.72 0.00 43.73 3.69
8384 8736 4.219944 GTGTGTGGACATCTTACACTCCTA 59.780 45.833 15.72 0.59 43.73 2.94
8385 8737 5.023452 TGTGTGGACATCTTACACTCCTAT 58.977 41.667 15.72 0.00 43.73 2.57
8386 8738 5.127194 TGTGTGGACATCTTACACTCCTATC 59.873 44.000 15.72 0.00 43.73 2.08
8387 8739 5.127194 GTGTGGACATCTTACACTCCTATCA 59.873 44.000 0.00 0.00 41.01 2.15
8388 8740 5.899547 TGTGGACATCTTACACTCCTATCAT 59.100 40.000 0.00 0.00 36.16 2.45
8389 8741 7.014326 GTGTGGACATCTTACACTCCTATCATA 59.986 40.741 0.00 0.00 41.01 2.15
8390 8742 7.730332 TGTGGACATCTTACACTCCTATCATAT 59.270 37.037 0.00 0.00 36.16 1.78
8391 8743 8.247562 GTGGACATCTTACACTCCTATCATATC 58.752 40.741 0.00 0.00 32.58 1.63
8392 8744 7.950124 TGGACATCTTACACTCCTATCATATCA 59.050 37.037 0.00 0.00 0.00 2.15
8393 8745 8.247562 GGACATCTTACACTCCTATCATATCAC 58.752 40.741 0.00 0.00 0.00 3.06
8394 8746 8.712228 ACATCTTACACTCCTATCATATCACA 57.288 34.615 0.00 0.00 0.00 3.58
8395 8747 9.319060 ACATCTTACACTCCTATCATATCACAT 57.681 33.333 0.00 0.00 0.00 3.21
8396 8748 9.800433 CATCTTACACTCCTATCATATCACATC 57.200 37.037 0.00 0.00 0.00 3.06
8397 8749 8.940397 TCTTACACTCCTATCATATCACATCA 57.060 34.615 0.00 0.00 0.00 3.07
8398 8750 8.797438 TCTTACACTCCTATCATATCACATCAC 58.203 37.037 0.00 0.00 0.00 3.06
8399 8751 6.983906 ACACTCCTATCATATCACATCACA 57.016 37.500 0.00 0.00 0.00 3.58
8400 8752 7.550597 ACACTCCTATCATATCACATCACAT 57.449 36.000 0.00 0.00 0.00 3.21
8401 8753 8.655935 ACACTCCTATCATATCACATCACATA 57.344 34.615 0.00 0.00 0.00 2.29
8402 8754 8.747471 ACACTCCTATCATATCACATCACATAG 58.253 37.037 0.00 0.00 0.00 2.23
8403 8755 7.705752 CACTCCTATCATATCACATCACATAGC 59.294 40.741 0.00 0.00 0.00 2.97
8404 8756 7.618907 ACTCCTATCATATCACATCACATAGCT 59.381 37.037 0.00 0.00 0.00 3.32
8405 8757 9.129532 CTCCTATCATATCACATCACATAGCTA 57.870 37.037 0.00 0.00 0.00 3.32
8406 8758 8.907885 TCCTATCATATCACATCACATAGCTAC 58.092 37.037 0.00 0.00 0.00 3.58
8407 8759 8.911965 CCTATCATATCACATCACATAGCTACT 58.088 37.037 0.00 0.00 0.00 2.57
8410 8762 8.286191 TCATATCACATCACATAGCTACTAGG 57.714 38.462 0.00 0.00 0.00 3.02
8411 8763 5.991933 ATCACATCACATAGCTACTAGGG 57.008 43.478 0.00 0.00 0.00 3.53
8412 8764 5.061721 TCACATCACATAGCTACTAGGGA 57.938 43.478 0.00 0.00 0.00 4.20
8413 8765 5.645201 TCACATCACATAGCTACTAGGGAT 58.355 41.667 0.00 0.00 0.00 3.85
8414 8766 5.478332 TCACATCACATAGCTACTAGGGATG 59.522 44.000 23.23 23.23 34.69 3.51
8415 8767 5.244851 CACATCACATAGCTACTAGGGATGT 59.755 44.000 24.17 24.17 38.18 3.06
8416 8768 5.244851 ACATCACATAGCTACTAGGGATGTG 59.755 44.000 26.92 21.42 45.63 3.21
8417 8769 4.804597 TCACATAGCTACTAGGGATGTGT 58.195 43.478 18.36 10.36 44.91 3.72
8418 8770 5.948842 TCACATAGCTACTAGGGATGTGTA 58.051 41.667 18.36 7.21 44.91 2.90
8419 8771 5.768662 TCACATAGCTACTAGGGATGTGTAC 59.231 44.000 18.36 0.00 44.91 2.90
8420 8772 5.047943 CACATAGCTACTAGGGATGTGTACC 60.048 48.000 13.15 0.00 41.49 3.34
8421 8773 2.584236 AGCTACTAGGGATGTGTACCG 58.416 52.381 0.00 0.00 31.46 4.02
8422 8774 1.000496 GCTACTAGGGATGTGTACCGC 60.000 57.143 0.00 0.00 31.46 5.68
8423 8775 2.584236 CTACTAGGGATGTGTACCGCT 58.416 52.381 0.00 0.00 31.46 5.52
8424 8776 1.112113 ACTAGGGATGTGTACCGCTG 58.888 55.000 0.00 0.00 31.46 5.18
8425 8777 0.249489 CTAGGGATGTGTACCGCTGC 60.249 60.000 0.00 0.00 31.46 5.25
8426 8778 0.973496 TAGGGATGTGTACCGCTGCA 60.973 55.000 0.00 0.00 31.46 4.41
8427 8779 1.376683 GGGATGTGTACCGCTGCAA 60.377 57.895 0.00 0.00 0.00 4.08
8428 8780 1.644786 GGGATGTGTACCGCTGCAAC 61.645 60.000 0.00 0.00 0.00 4.17
8429 8781 0.673644 GGATGTGTACCGCTGCAACT 60.674 55.000 0.00 0.00 0.00 3.16
8430 8782 0.721718 GATGTGTACCGCTGCAACTC 59.278 55.000 0.00 0.00 0.00 3.01
8431 8783 0.034756 ATGTGTACCGCTGCAACTCA 59.965 50.000 0.00 2.49 0.00 3.41
8432 8784 0.599991 TGTGTACCGCTGCAACTCAG 60.600 55.000 0.00 0.00 45.62 3.35
8433 8785 0.600255 GTGTACCGCTGCAACTCAGT 60.600 55.000 0.00 0.00 44.66 3.41
8434 8786 0.105964 TGTACCGCTGCAACTCAGTT 59.894 50.000 0.00 0.00 44.66 3.16
8435 8787 0.512952 GTACCGCTGCAACTCAGTTG 59.487 55.000 13.67 13.67 45.24 3.16
8436 8788 0.105964 TACCGCTGCAACTCAGTTGT 59.894 50.000 18.89 0.38 44.40 3.32
8437 8789 0.748005 ACCGCTGCAACTCAGTTGTT 60.748 50.000 18.89 0.00 44.40 2.83
8438 8790 1.225855 CCGCTGCAACTCAGTTGTTA 58.774 50.000 18.89 7.80 44.40 2.41
8439 8791 1.069906 CCGCTGCAACTCAGTTGTTAC 60.070 52.381 18.89 7.46 44.40 2.50
8440 8792 1.867233 CGCTGCAACTCAGTTGTTACT 59.133 47.619 18.89 0.00 44.40 2.24
8441 8793 3.057019 CGCTGCAACTCAGTTGTTACTA 58.943 45.455 18.89 0.75 44.40 1.82
8442 8794 3.121944 CGCTGCAACTCAGTTGTTACTAG 59.878 47.826 18.89 10.44 44.40 2.57
8443 8795 3.120511 GCTGCAACTCAGTTGTTACTAGC 60.121 47.826 18.89 15.46 44.40 3.42
8444 8796 3.399330 TGCAACTCAGTTGTTACTAGCC 58.601 45.455 18.89 0.26 44.40 3.93
8445 8797 2.412089 GCAACTCAGTTGTTACTAGCCG 59.588 50.000 18.89 0.00 44.40 5.52
8446 8798 3.859627 GCAACTCAGTTGTTACTAGCCGA 60.860 47.826 18.89 0.00 44.40 5.54
8447 8799 3.572604 ACTCAGTTGTTACTAGCCGAC 57.427 47.619 0.00 0.00 31.96 4.79
8448 8800 2.230750 ACTCAGTTGTTACTAGCCGACC 59.769 50.000 0.00 0.00 31.96 4.79
8449 8801 1.200716 TCAGTTGTTACTAGCCGACCG 59.799 52.381 0.00 0.00 31.96 4.79
8450 8802 1.200716 CAGTTGTTACTAGCCGACCGA 59.799 52.381 0.00 0.00 31.96 4.69
8451 8803 1.888512 AGTTGTTACTAGCCGACCGAA 59.111 47.619 0.00 0.00 31.21 4.30
8452 8804 1.988467 GTTGTTACTAGCCGACCGAAC 59.012 52.381 0.00 0.00 0.00 3.95
8453 8805 0.527565 TGTTACTAGCCGACCGAACC 59.472 55.000 0.00 0.00 0.00 3.62
8454 8806 0.179127 GTTACTAGCCGACCGAACCC 60.179 60.000 0.00 0.00 0.00 4.11
8455 8807 0.611618 TTACTAGCCGACCGAACCCA 60.612 55.000 0.00 0.00 0.00 4.51
8456 8808 1.033746 TACTAGCCGACCGAACCCAG 61.034 60.000 0.00 0.00 0.00 4.45
8457 8809 3.718210 CTAGCCGACCGAACCCAGC 62.718 68.421 0.00 0.00 0.00 4.85
8460 8812 4.760047 CCGACCGAACCCAGCTGG 62.760 72.222 26.87 26.87 41.37 4.85
8471 8823 2.977772 CCCAGCTGGTTTTGTCAAAA 57.022 45.000 30.63 6.65 0.00 2.44
8472 8824 3.473923 CCCAGCTGGTTTTGTCAAAAT 57.526 42.857 30.63 0.00 32.22 1.82
8473 8825 4.599047 CCCAGCTGGTTTTGTCAAAATA 57.401 40.909 30.63 6.02 32.22 1.40
8474 8826 4.954875 CCCAGCTGGTTTTGTCAAAATAA 58.045 39.130 30.63 5.03 32.22 1.40
8475 8827 5.363939 CCCAGCTGGTTTTGTCAAAATAAA 58.636 37.500 30.63 2.80 32.22 1.40
8476 8828 5.997129 CCCAGCTGGTTTTGTCAAAATAAAT 59.003 36.000 30.63 0.00 32.22 1.40
8477 8829 7.158021 CCCAGCTGGTTTTGTCAAAATAAATA 58.842 34.615 30.63 0.00 32.22 1.40
8478 8830 7.117667 CCCAGCTGGTTTTGTCAAAATAAATAC 59.882 37.037 30.63 0.97 32.22 1.89
8479 8831 7.872483 CCAGCTGGTTTTGTCAAAATAAATACT 59.128 33.333 25.53 5.11 32.22 2.12
8480 8832 9.906660 CAGCTGGTTTTGTCAAAATAAATACTA 57.093 29.630 13.65 0.00 32.22 1.82
8503 8855 9.539825 ACTAAATAATTTGTTGACATGTTGCAA 57.460 25.926 0.00 0.00 0.00 4.08
8506 8858 8.836268 AATAATTTGTTGACATGTTGCAATCT 57.164 26.923 0.59 0.00 0.00 2.40
8507 8859 6.533819 AATTTGTTGACATGTTGCAATCTG 57.466 33.333 0.59 6.02 0.00 2.90
8508 8860 3.646611 TGTTGACATGTTGCAATCTGG 57.353 42.857 0.59 0.00 0.00 3.86
8509 8861 2.296752 TGTTGACATGTTGCAATCTGGG 59.703 45.455 0.59 0.00 0.00 4.45
8510 8862 0.889994 TGACATGTTGCAATCTGGGC 59.110 50.000 0.59 0.00 0.00 5.36
8511 8863 0.179156 GACATGTTGCAATCTGGGCG 60.179 55.000 0.59 0.00 0.00 6.13
8512 8864 1.517694 CATGTTGCAATCTGGGCGC 60.518 57.895 0.59 0.00 0.00 6.53
8513 8865 2.713967 ATGTTGCAATCTGGGCGCC 61.714 57.895 21.18 21.18 0.00 6.53
8514 8866 3.064324 GTTGCAATCTGGGCGCCT 61.064 61.111 28.56 2.29 0.00 5.52
8515 8867 1.748879 GTTGCAATCTGGGCGCCTA 60.749 57.895 28.56 21.41 0.00 3.93
8516 8868 1.748879 TTGCAATCTGGGCGCCTAC 60.749 57.895 28.56 11.61 0.00 3.18
8517 8869 2.124736 GCAATCTGGGCGCCTACA 60.125 61.111 28.56 16.20 0.00 2.74
8518 8870 1.748879 GCAATCTGGGCGCCTACAA 60.749 57.895 28.56 9.74 0.00 2.41
8519 8871 1.718757 GCAATCTGGGCGCCTACAAG 61.719 60.000 28.56 18.31 0.00 3.16
8520 8872 1.097547 CAATCTGGGCGCCTACAAGG 61.098 60.000 28.56 8.62 38.80 3.61
8529 8881 4.841441 CCTACAAGGCTTGGGCAA 57.159 55.556 29.26 11.97 40.87 4.52
8530 8882 2.267045 CCTACAAGGCTTGGGCAAC 58.733 57.895 29.26 0.00 40.87 4.17
8531 8883 1.586154 CCTACAAGGCTTGGGCAACG 61.586 60.000 29.26 11.32 40.87 4.10
8532 8884 0.605319 CTACAAGGCTTGGGCAACGA 60.605 55.000 29.26 6.28 40.87 3.85
8533 8885 0.037590 TACAAGGCTTGGGCAACGAT 59.962 50.000 29.26 9.78 40.87 3.73
8534 8886 1.213537 CAAGGCTTGGGCAACGATG 59.786 57.895 19.55 0.00 40.87 3.84
8535 8887 1.228552 AAGGCTTGGGCAACGATGT 60.229 52.632 0.00 0.00 40.87 3.06
8536 8888 0.827507 AAGGCTTGGGCAACGATGTT 60.828 50.000 0.00 0.00 40.87 2.71
8537 8889 0.037590 AGGCTTGGGCAACGATGTTA 59.962 50.000 0.00 0.00 40.87 2.41
8538 8890 0.170339 GGCTTGGGCAACGATGTTAC 59.830 55.000 0.00 0.00 40.87 2.50
8539 8891 0.878416 GCTTGGGCAACGATGTTACA 59.122 50.000 0.00 0.00 38.54 2.41
8540 8892 1.268352 GCTTGGGCAACGATGTTACAA 59.732 47.619 0.00 0.00 38.54 2.41
8541 8893 2.287909 GCTTGGGCAACGATGTTACAAA 60.288 45.455 0.00 0.00 38.54 2.83
8542 8894 3.305110 CTTGGGCAACGATGTTACAAAC 58.695 45.455 0.00 0.00 37.60 2.93
8543 8895 1.609555 TGGGCAACGATGTTACAAACC 59.390 47.619 0.00 0.00 37.60 3.27
8544 8896 1.068125 GGGCAACGATGTTACAAACCC 60.068 52.381 0.00 0.00 37.60 4.11
8545 8897 1.400500 GGCAACGATGTTACAAACCCG 60.400 52.381 0.00 0.00 34.24 5.28
8546 8898 1.400500 GCAACGATGTTACAAACCCGG 60.400 52.381 0.00 0.00 32.97 5.73
8547 8899 2.144730 CAACGATGTTACAAACCCGGA 58.855 47.619 0.73 0.00 32.97 5.14
8548 8900 1.799544 ACGATGTTACAAACCCGGAC 58.200 50.000 0.73 0.00 32.97 4.79
8549 8901 1.070445 ACGATGTTACAAACCCGGACA 59.930 47.619 0.73 0.00 32.97 4.02
8550 8902 1.461897 CGATGTTACAAACCCGGACAC 59.538 52.381 0.73 0.00 0.00 3.67
8551 8903 1.461897 GATGTTACAAACCCGGACACG 59.538 52.381 0.73 0.00 40.55 4.49
8552 8904 0.177604 TGTTACAAACCCGGACACGT 59.822 50.000 0.73 0.00 38.78 4.49
8553 8905 0.582960 GTTACAAACCCGGACACGTG 59.417 55.000 15.48 15.48 38.78 4.49
8554 8906 0.463204 TTACAAACCCGGACACGTGA 59.537 50.000 25.01 0.00 38.78 4.35
8555 8907 0.249405 TACAAACCCGGACACGTGAC 60.249 55.000 25.01 16.95 38.78 3.67
8556 8908 2.279650 AAACCCGGACACGTGACG 60.280 61.111 25.01 24.00 38.78 4.35
8557 8909 3.080045 AAACCCGGACACGTGACGT 62.080 57.895 25.01 4.10 42.36 4.34
8558 8910 2.576643 AAACCCGGACACGTGACGTT 62.577 55.000 25.01 12.80 38.32 3.99
8559 8911 1.733402 AACCCGGACACGTGACGTTA 61.733 55.000 25.01 0.00 38.32 3.18
8560 8912 1.213537 CCCGGACACGTGACGTTAT 59.786 57.895 25.01 0.00 38.32 1.89
8561 8913 0.451383 CCCGGACACGTGACGTTATA 59.549 55.000 25.01 0.00 38.32 0.98
8562 8914 1.135431 CCCGGACACGTGACGTTATAA 60.135 52.381 25.01 0.00 38.32 0.98
8563 8915 2.179589 CCGGACACGTGACGTTATAAG 58.820 52.381 25.01 8.38 38.32 1.73
8564 8916 2.179589 CGGACACGTGACGTTATAAGG 58.820 52.381 25.01 0.00 38.32 2.69
8565 8917 2.414559 CGGACACGTGACGTTATAAGGT 60.415 50.000 25.01 10.47 38.32 3.50
8566 8918 3.181511 CGGACACGTGACGTTATAAGGTA 60.182 47.826 25.01 0.00 38.32 3.08
8567 8919 4.671508 CGGACACGTGACGTTATAAGGTAA 60.672 45.833 25.01 0.96 38.32 2.85
8568 8920 4.795278 GGACACGTGACGTTATAAGGTAAG 59.205 45.833 25.01 7.86 38.32 2.34
8569 8921 4.737054 ACACGTGACGTTATAAGGTAAGG 58.263 43.478 25.01 11.37 38.32 2.69
8570 8922 3.549070 CACGTGACGTTATAAGGTAAGGC 59.451 47.826 10.90 0.10 38.32 4.35
8571 8923 3.118542 CGTGACGTTATAAGGTAAGGCC 58.881 50.000 10.64 0.00 37.58 5.19
8572 8924 3.429272 CGTGACGTTATAAGGTAAGGCCA 60.429 47.826 5.01 2.26 40.61 5.36
8573 8925 4.506758 GTGACGTTATAAGGTAAGGCCAA 58.493 43.478 5.01 0.00 40.61 4.52
8574 8926 5.121105 GTGACGTTATAAGGTAAGGCCAAT 58.879 41.667 5.01 0.00 40.61 3.16
8575 8927 5.235831 GTGACGTTATAAGGTAAGGCCAATC 59.764 44.000 5.01 0.00 40.61 2.67
8576 8928 4.374399 ACGTTATAAGGTAAGGCCAATCG 58.626 43.478 5.01 0.00 40.61 3.34
8577 8929 4.141869 ACGTTATAAGGTAAGGCCAATCGT 60.142 41.667 5.01 0.00 40.61 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 5.762179 TCATGATTTGTCTCTACCTGGTT 57.238 39.130 3.84 0.00 0.00 3.67
7 8 5.836347 TCGATCATGATTTGTCTCTACCTG 58.164 41.667 10.14 0.00 0.00 4.00
59 60 3.906998 AGAGAGAGAAACACATCACACG 58.093 45.455 0.00 0.00 0.00 4.49
71 72 2.620367 GCCCAGTGAGAGAGAGAGAGAA 60.620 54.545 0.00 0.00 0.00 2.87
73 74 1.392589 GCCCAGTGAGAGAGAGAGAG 58.607 60.000 0.00 0.00 0.00 3.20
74 75 0.393673 CGCCCAGTGAGAGAGAGAGA 60.394 60.000 0.00 0.00 0.00 3.10
89 90 0.531974 TTTCTCTCACACACACGCCC 60.532 55.000 0.00 0.00 0.00 6.13
90 91 0.861837 CTTTCTCTCACACACACGCC 59.138 55.000 0.00 0.00 0.00 5.68
91 92 0.861837 CCTTTCTCTCACACACACGC 59.138 55.000 0.00 0.00 0.00 5.34
92 93 2.509052 TCCTTTCTCTCACACACACG 57.491 50.000 0.00 0.00 0.00 4.49
107 117 3.331150 TCATGTTGCGTCGTAATTCCTT 58.669 40.909 0.00 0.00 0.00 3.36
189 202 1.604278 GGAGCGGTCATTAGGAAATGC 59.396 52.381 17.59 0.00 41.96 3.56
293 306 1.476891 GTACTCTCGAGTTGGCCATCA 59.523 52.381 16.12 0.00 42.54 3.07
348 361 1.889170 CAGAGTCACTAGAGGTGTGCA 59.111 52.381 0.00 0.00 45.50 4.57
395 408 2.791734 GGATCGATCGACGCGACG 60.792 66.667 22.06 24.29 40.94 5.12
397 410 3.657059 GGGGATCGATCGACGCGA 61.657 66.667 22.06 13.61 42.48 5.87
399 412 2.857744 AAGGGGGATCGATCGACGC 61.858 63.158 22.06 20.22 42.26 5.19
407 420 4.050313 TCTCCACAAGGGGGATCG 57.950 61.111 0.00 0.00 43.00 3.69
434 447 0.512952 CTTGCGGACGGTCTTTCTTG 59.487 55.000 8.23 0.00 0.00 3.02
437 450 1.014564 CCTCTTGCGGACGGTCTTTC 61.015 60.000 8.23 0.00 0.00 2.62
471 484 1.956170 GTCACACACTCGCACCCTG 60.956 63.158 0.00 0.00 0.00 4.45
482 495 1.625315 CCCTTCTCCATCAGTCACACA 59.375 52.381 0.00 0.00 0.00 3.72
488 501 2.850833 TGATTCCCCTTCTCCATCAGT 58.149 47.619 0.00 0.00 0.00 3.41
510 523 1.202348 ACTGCTCCATCGTCTTCATCG 60.202 52.381 0.00 0.00 0.00 3.84
515 528 2.550830 AACAACTGCTCCATCGTCTT 57.449 45.000 0.00 0.00 0.00 3.01
528 541 7.259290 TGAAGAAATAAGCGAGAAAACAACT 57.741 32.000 0.00 0.00 0.00 3.16
556 569 9.715121 ATTTGATTTTAACTCCTCACGTACTAA 57.285 29.630 0.00 0.00 0.00 2.24
557 570 9.362539 GATTTGATTTTAACTCCTCACGTACTA 57.637 33.333 0.00 0.00 0.00 1.82
558 571 7.063074 CGATTTGATTTTAACTCCTCACGTACT 59.937 37.037 0.00 0.00 0.00 2.73
562 575 6.015504 CACGATTTGATTTTAACTCCTCACG 58.984 40.000 0.00 0.00 0.00 4.35
573 586 3.845775 CGATTCACGCACGATTTGATTTT 59.154 39.130 0.00 0.00 34.51 1.82
579 592 1.126113 GTGACGATTCACGCACGATTT 59.874 47.619 0.00 0.00 42.86 2.17
580 593 0.713883 GTGACGATTCACGCACGATT 59.286 50.000 0.00 0.00 42.86 3.34
581 594 2.359792 GTGACGATTCACGCACGAT 58.640 52.632 0.00 0.00 42.86 3.73
582 595 3.837093 GTGACGATTCACGCACGA 58.163 55.556 0.00 0.00 42.86 4.35
630 643 7.639945 ACTCGTTTCAAAAACTGATTTCTAGG 58.360 34.615 1.55 0.00 32.78 3.02
634 647 6.262601 TGGACTCGTTTCAAAAACTGATTTC 58.737 36.000 1.55 1.72 32.78 2.17
636 649 5.828299 TGGACTCGTTTCAAAAACTGATT 57.172 34.783 1.55 0.00 32.78 2.57
638 651 5.124776 ACAATGGACTCGTTTCAAAAACTGA 59.875 36.000 1.55 0.69 0.00 3.41
639 652 5.339990 ACAATGGACTCGTTTCAAAAACTG 58.660 37.500 1.55 0.00 0.00 3.16
640 653 5.576447 ACAATGGACTCGTTTCAAAAACT 57.424 34.783 1.55 0.00 0.00 2.66
641 654 5.802956 TGAACAATGGACTCGTTTCAAAAAC 59.197 36.000 0.00 0.00 0.00 2.43
642 655 5.955488 TGAACAATGGACTCGTTTCAAAAA 58.045 33.333 0.00 0.00 0.00 1.94
1035 1062 2.526873 AGCAGGGAACTCACGGGT 60.527 61.111 0.00 0.00 40.21 5.28
1070 1097 0.260230 AATCTGAGAGAGCGGAGGGA 59.740 55.000 0.00 0.00 0.00 4.20
1099 1126 1.447643 GCAGCACATAGGGACGGAT 59.552 57.895 0.00 0.00 0.00 4.18
1251 1278 1.063912 CGAGCTCGCCAATGCAAAATA 59.936 47.619 25.07 0.00 37.32 1.40
1428 1455 4.508492 CACACATCAGATCAGAGATTCAGC 59.492 45.833 0.00 0.00 0.00 4.26
1524 1551 1.228063 CTGGCACACTGTTCCAGCT 60.228 57.895 14.03 0.00 39.72 4.24
1565 1601 5.133221 CCAAGTAACTCATAAGAATGGGGG 58.867 45.833 0.00 0.00 37.97 5.40
1726 1763 8.673711 CACTTAAAATTATCAGACAATTCCGGA 58.326 33.333 0.00 0.00 0.00 5.14
2182 2227 3.064271 GCGACTGTGTTTCCTTTACAACA 59.936 43.478 0.00 0.00 0.00 3.33
2353 2398 8.897752 GTGAACCATCTATTTAGAAGAAAGCAT 58.102 33.333 0.00 0.00 35.69 3.79
2538 2619 3.381908 ACTCAACGTGCCAATTTGGTTTA 59.618 39.130 16.62 1.66 40.46 2.01
2565 2646 9.063615 CATTCATTCAACCAGATGATCTATCAA 57.936 33.333 0.00 0.00 40.69 2.57
2656 2739 7.126726 AGGCTGGGAAATACAACAGTATAAGTA 59.873 37.037 0.00 0.00 33.62 2.24
2666 2749 5.770162 AGCATTATAGGCTGGGAAATACAAC 59.230 40.000 0.00 0.00 40.80 3.32
2711 2795 3.953775 ACCTGGGCCTTGTCACGG 61.954 66.667 4.53 0.00 0.00 4.94
2807 2891 6.698008 TCTACAGGCAATGAATGTTAATGG 57.302 37.500 0.00 0.00 0.00 3.16
2920 3004 4.785376 ACTAGGGTCCTCAAAATGACATCT 59.215 41.667 0.00 0.00 33.09 2.90
3033 3117 6.432607 TGCAATGCAGAAGATTAAGAGAAG 57.567 37.500 2.72 0.00 33.32 2.85
3054 3138 6.158598 TGAGAAAAGCAAATCCATTAACTGC 58.841 36.000 0.00 0.00 0.00 4.40
3250 3334 6.918022 GCCTTGTAATAAATATGACAGCAACC 59.082 38.462 0.00 0.00 29.11 3.77
3481 3583 1.406069 CGCATGAAAGCTAGACCCAGT 60.406 52.381 0.00 0.00 0.00 4.00
3585 3689 2.950781 ACGATCTCTGGATGCTCCTAA 58.049 47.619 0.00 0.00 37.46 2.69
3603 3707 0.580104 GGTCGACAAGTTGGACAACG 59.420 55.000 18.91 5.29 45.50 4.10
3672 3776 5.063817 GCCAAAACATCAATCCACTAAATGC 59.936 40.000 0.00 0.00 0.00 3.56
3717 3824 2.528564 CTGAAGAATTCCAGGGGCAAA 58.471 47.619 0.65 0.00 46.93 3.68
4099 4208 1.869767 GAGTCCTGCTTGGCAATATCG 59.130 52.381 0.00 0.00 38.41 2.92
4100 4209 3.137533 GAGAGTCCTGCTTGGCAATATC 58.862 50.000 0.00 0.00 38.41 1.63
4222 4331 6.523676 AAAAATGTGAAGGCAATAACGTTG 57.476 33.333 11.99 0.00 0.00 4.10
4241 4350 6.026186 TCCCCTGCCCAATAAAGATTAAAAA 58.974 36.000 0.00 0.00 0.00 1.94
4426 4567 4.526970 AGGGCTTTGTAACCATCTATGTG 58.473 43.478 0.00 0.00 0.00 3.21
4495 4636 6.726258 TGCATAGAACGGAGCATAAATATG 57.274 37.500 0.00 0.00 36.78 1.78
4613 4754 1.338105 GCCAATCTTTTTGGGTCCAGC 60.338 52.381 6.51 0.00 39.90 4.85
4812 4953 3.483808 TCTAGCAAACCATGACACACA 57.516 42.857 0.00 0.00 0.00 3.72
4907 5052 1.412343 AGGCAAAACATTTTCAGCGGT 59.588 42.857 0.00 0.00 0.00 5.68
5021 5166 8.486210 AGGCTCAACAATAATCACTACAAGATA 58.514 33.333 0.00 0.00 0.00 1.98
5157 5307 2.645163 CATGCATCTCGTCTACGTCTC 58.355 52.381 0.00 0.00 40.80 3.36
5293 5443 6.067217 AGCAGGAAATTACCAAGACACTAT 57.933 37.500 0.00 0.00 0.00 2.12
5662 5814 6.823689 ACTCTGTTGACAAAGAAGAAAGCTTA 59.176 34.615 0.00 0.00 33.61 3.09
5745 5900 1.188863 GAAGCAAAGCATGATGGGGT 58.811 50.000 0.00 0.00 0.00 4.95
5762 5917 1.140852 ACAGTAGGCTGCACACAAGAA 59.859 47.619 5.14 0.00 46.30 2.52
6012 6167 1.355381 TCTGTCTGCCATTCAACCCAT 59.645 47.619 0.00 0.00 0.00 4.00
6143 6298 1.734465 GTCTGCAGCATACAAGTCCAC 59.266 52.381 9.47 0.00 0.00 4.02
6368 6541 7.664082 ATGTCTGAATATACAATACAGCAGC 57.336 36.000 0.00 0.00 0.00 5.25
6385 6558 7.657336 TCAGCGTGTATCATTAATATGTCTGA 58.343 34.615 0.00 0.00 33.34 3.27
6470 6643 7.750458 CGTGTGCAAATAACAAGAGAACAATAT 59.250 33.333 0.00 0.00 0.00 1.28
6589 6772 9.930693 TGTTTCCAAACAAACTTAAAACTACAT 57.069 25.926 2.29 0.00 45.17 2.29
6631 6814 8.028938 GTGCATTATACATTCCATGGATAAACC 58.971 37.037 17.06 6.78 46.19 3.27
6645 6828 8.935844 CAATATACTTGTCGGTGCATTATACAT 58.064 33.333 0.00 0.00 0.00 2.29
6836 7180 3.245229 ACATTGCCAATCAGTTACCTCCA 60.245 43.478 0.00 0.00 0.00 3.86
6896 7240 4.582656 TCTCCATCAAACGTGAACCAATTT 59.417 37.500 0.00 0.00 37.30 1.82
6959 7303 2.977578 CTCGGAGTTGGGAGAGGAA 58.022 57.895 0.00 0.00 31.90 3.36
6995 7339 1.487976 TCACCATCATCAGCTTCCTCC 59.512 52.381 0.00 0.00 0.00 4.30
7182 7526 2.520979 GTCTGTGCTAGCTTCAGTACG 58.479 52.381 26.77 12.53 34.24 3.67
7282 7626 5.705397 AGGATTGTCCAAATCAGATGAGA 57.295 39.130 0.00 0.00 39.61 3.27
7328 7672 4.655027 CCAAATCACTCACATTGACATCG 58.345 43.478 0.00 0.00 0.00 3.84
7339 7683 0.674581 CGAGCCAGCCAAATCACTCA 60.675 55.000 0.00 0.00 0.00 3.41
7386 7730 2.359848 TCGGTACCTCCACATAATCGTG 59.640 50.000 10.90 0.00 36.61 4.35
7391 7735 4.098960 GTCTTGATCGGTACCTCCACATAA 59.901 45.833 10.90 0.00 35.57 1.90
7392 7736 3.635373 GTCTTGATCGGTACCTCCACATA 59.365 47.826 10.90 0.00 35.57 2.29
7438 7782 4.866508 TCCACGACTGTATCAGTTTTCT 57.133 40.909 3.91 0.00 45.44 2.52
7579 7923 0.829990 TCCATGAGATACGCTGCCAA 59.170 50.000 0.00 0.00 0.00 4.52
7846 8190 4.236935 ACATTTCGCATCAACCAATTGTC 58.763 39.130 4.43 0.00 37.11 3.18
8133 8485 3.017442 GGGGAATAGCTGGTCAAGAAAC 58.983 50.000 0.00 0.00 0.00 2.78
8154 8506 4.418013 TTGCATCGGAACAACATAGTTG 57.582 40.909 8.24 8.24 0.00 3.16
8159 8511 6.365789 CACTAAATTTTGCATCGGAACAACAT 59.634 34.615 0.00 0.00 0.00 2.71
8184 8536 2.350772 CGGCTGACATCAAGTGTTTTCC 60.351 50.000 0.00 0.00 42.36 3.13
8185 8537 2.350772 CCGGCTGACATCAAGTGTTTTC 60.351 50.000 0.00 0.00 42.36 2.29
8186 8538 1.608590 CCGGCTGACATCAAGTGTTTT 59.391 47.619 0.00 0.00 42.36 2.43
8187 8539 1.202758 TCCGGCTGACATCAAGTGTTT 60.203 47.619 0.00 0.00 42.36 2.83
8188 8540 0.396435 TCCGGCTGACATCAAGTGTT 59.604 50.000 0.00 0.00 42.36 3.32
8189 8541 0.615331 ATCCGGCTGACATCAAGTGT 59.385 50.000 0.00 0.00 45.83 3.55
8190 8542 1.012086 CATCCGGCTGACATCAAGTG 58.988 55.000 0.00 0.00 0.00 3.16
8191 8543 0.904649 TCATCCGGCTGACATCAAGT 59.095 50.000 3.28 0.00 0.00 3.16
8192 8544 2.251409 ATCATCCGGCTGACATCAAG 57.749 50.000 10.77 0.00 0.00 3.02
8193 8545 2.715749 AATCATCCGGCTGACATCAA 57.284 45.000 10.77 0.00 0.00 2.57
8194 8546 2.171237 AGAAATCATCCGGCTGACATCA 59.829 45.455 10.77 0.00 0.00 3.07
8195 8547 2.843701 AGAAATCATCCGGCTGACATC 58.156 47.619 10.77 11.59 0.00 3.06
8196 8548 3.287867 AAGAAATCATCCGGCTGACAT 57.712 42.857 10.77 1.97 0.00 3.06
8197 8549 2.787473 AAGAAATCATCCGGCTGACA 57.213 45.000 10.77 0.00 0.00 3.58
8198 8550 2.356069 GGAAAGAAATCATCCGGCTGAC 59.644 50.000 10.77 0.00 0.00 3.51
8199 8551 2.643551 GGAAAGAAATCATCCGGCTGA 58.356 47.619 10.98 10.98 0.00 4.26
8205 8557 6.202226 GCTGATTTACGGAAAGAAATCATCC 58.798 40.000 9.72 2.85 45.96 3.51
8206 8558 6.202226 GGCTGATTTACGGAAAGAAATCATC 58.798 40.000 9.72 6.58 45.96 2.92
8207 8559 5.220854 CGGCTGATTTACGGAAAGAAATCAT 60.221 40.000 9.72 0.00 45.96 2.45
8208 8560 4.094294 CGGCTGATTTACGGAAAGAAATCA 59.906 41.667 0.00 9.10 45.34 2.57
8209 8561 4.588278 CGGCTGATTTACGGAAAGAAATC 58.412 43.478 0.00 1.16 40.80 2.17
8210 8562 3.181500 GCGGCTGATTTACGGAAAGAAAT 60.181 43.478 0.00 0.00 0.00 2.17
8211 8563 2.160813 GCGGCTGATTTACGGAAAGAAA 59.839 45.455 0.00 0.00 0.00 2.52
8212 8564 1.735571 GCGGCTGATTTACGGAAAGAA 59.264 47.619 0.00 0.00 0.00 2.52
8213 8565 1.365699 GCGGCTGATTTACGGAAAGA 58.634 50.000 0.00 0.00 0.00 2.52
8214 8566 0.026285 CGCGGCTGATTTACGGAAAG 59.974 55.000 0.00 0.00 0.00 2.62
8215 8567 0.671163 ACGCGGCTGATTTACGGAAA 60.671 50.000 12.47 0.00 0.00 3.13
8216 8568 1.079681 ACGCGGCTGATTTACGGAA 60.080 52.632 12.47 0.00 0.00 4.30
8217 8569 1.517694 GACGCGGCTGATTTACGGA 60.518 57.895 12.47 0.00 0.00 4.69
8218 8570 2.522638 GGACGCGGCTGATTTACGG 61.523 63.158 13.91 0.00 0.00 4.02
8219 8571 2.522638 GGGACGCGGCTGATTTACG 61.523 63.158 13.91 0.00 0.00 3.18
8220 8572 1.153429 AGGGACGCGGCTGATTTAC 60.153 57.895 13.91 0.00 0.00 2.01
8221 8573 1.153449 CAGGGACGCGGCTGATTTA 60.153 57.895 13.91 0.00 0.00 1.40
8222 8574 2.436646 CAGGGACGCGGCTGATTT 60.437 61.111 13.91 0.00 0.00 2.17
8223 8575 4.473520 CCAGGGACGCGGCTGATT 62.474 66.667 13.91 0.00 0.00 2.57
8248 8600 2.505557 GAAGGGACCACGTACGCG 60.506 66.667 16.72 3.53 44.93 6.01
8249 8601 2.125793 GGAAGGGACCACGTACGC 60.126 66.667 16.72 0.00 0.00 4.42
8250 8602 1.941999 GAGGGAAGGGACCACGTACG 61.942 65.000 15.01 15.01 0.00 3.67
8251 8603 0.901580 TGAGGGAAGGGACCACGTAC 60.902 60.000 0.00 0.00 0.00 3.67
8252 8604 0.901580 GTGAGGGAAGGGACCACGTA 60.902 60.000 0.00 0.00 0.00 3.57
8253 8605 2.203182 TGAGGGAAGGGACCACGT 59.797 61.111 0.00 0.00 0.00 4.49
8254 8606 1.481056 AAGTGAGGGAAGGGACCACG 61.481 60.000 0.00 0.00 33.37 4.94
8255 8607 0.771755 AAAGTGAGGGAAGGGACCAC 59.228 55.000 0.00 0.00 0.00 4.16
8256 8608 1.982958 GTAAAGTGAGGGAAGGGACCA 59.017 52.381 0.00 0.00 0.00 4.02
8257 8609 1.066358 CGTAAAGTGAGGGAAGGGACC 60.066 57.143 0.00 0.00 0.00 4.46
8258 8610 1.622312 ACGTAAAGTGAGGGAAGGGAC 59.378 52.381 0.00 0.00 0.00 4.46
8259 8611 2.019807 ACGTAAAGTGAGGGAAGGGA 57.980 50.000 0.00 0.00 0.00 4.20
8260 8612 2.853235 AACGTAAAGTGAGGGAAGGG 57.147 50.000 0.00 0.00 0.00 3.95
8261 8613 3.746492 CAGAAACGTAAAGTGAGGGAAGG 59.254 47.826 0.00 0.00 0.00 3.46
8262 8614 4.377897 ACAGAAACGTAAAGTGAGGGAAG 58.622 43.478 0.00 0.00 0.00 3.46
8263 8615 4.411256 ACAGAAACGTAAAGTGAGGGAA 57.589 40.909 0.00 0.00 0.00 3.97
8264 8616 4.560108 GCTACAGAAACGTAAAGTGAGGGA 60.560 45.833 0.00 0.00 0.00 4.20
8265 8617 3.678548 GCTACAGAAACGTAAAGTGAGGG 59.321 47.826 0.00 0.00 0.00 4.30
8266 8618 3.364023 CGCTACAGAAACGTAAAGTGAGG 59.636 47.826 0.00 0.00 0.00 3.86
8267 8619 4.224433 TCGCTACAGAAACGTAAAGTGAG 58.776 43.478 0.00 0.00 0.00 3.51
8268 8620 4.227512 TCGCTACAGAAACGTAAAGTGA 57.772 40.909 0.00 0.00 0.00 3.41
8269 8621 5.118050 TCAATCGCTACAGAAACGTAAAGTG 59.882 40.000 0.00 0.00 0.00 3.16
8270 8622 5.118203 GTCAATCGCTACAGAAACGTAAAGT 59.882 40.000 0.00 0.00 0.00 2.66
8271 8623 5.444218 GGTCAATCGCTACAGAAACGTAAAG 60.444 44.000 0.00 0.00 0.00 1.85
8272 8624 4.386652 GGTCAATCGCTACAGAAACGTAAA 59.613 41.667 0.00 0.00 0.00 2.01
8273 8625 3.922240 GGTCAATCGCTACAGAAACGTAA 59.078 43.478 0.00 0.00 0.00 3.18
8274 8626 3.192001 AGGTCAATCGCTACAGAAACGTA 59.808 43.478 0.00 0.00 0.00 3.57
8275 8627 2.029290 AGGTCAATCGCTACAGAAACGT 60.029 45.455 0.00 0.00 0.00 3.99
8276 8628 2.607187 AGGTCAATCGCTACAGAAACG 58.393 47.619 0.00 0.00 0.00 3.60
8277 8629 4.246458 AGAAGGTCAATCGCTACAGAAAC 58.754 43.478 0.00 0.00 0.00 2.78
8278 8630 4.537135 AGAAGGTCAATCGCTACAGAAA 57.463 40.909 0.00 0.00 0.00 2.52
8279 8631 4.440250 GCTAGAAGGTCAATCGCTACAGAA 60.440 45.833 0.00 0.00 0.00 3.02
8280 8632 3.066900 GCTAGAAGGTCAATCGCTACAGA 59.933 47.826 0.00 0.00 0.00 3.41
8281 8633 3.376540 GCTAGAAGGTCAATCGCTACAG 58.623 50.000 0.00 0.00 0.00 2.74
8282 8634 2.223502 CGCTAGAAGGTCAATCGCTACA 60.224 50.000 0.00 0.00 0.00 2.74
8283 8635 2.386249 CGCTAGAAGGTCAATCGCTAC 58.614 52.381 0.00 0.00 0.00 3.58
8284 8636 1.337071 CCGCTAGAAGGTCAATCGCTA 59.663 52.381 0.00 0.00 0.00 4.26
8285 8637 0.103208 CCGCTAGAAGGTCAATCGCT 59.897 55.000 0.00 0.00 0.00 4.93
8286 8638 0.179108 ACCGCTAGAAGGTCAATCGC 60.179 55.000 4.68 0.00 37.44 4.58
8293 8645 1.404843 GGATCAGACCGCTAGAAGGT 58.595 55.000 9.71 9.71 46.16 3.50
8294 8646 0.312416 CGGATCAGACCGCTAGAAGG 59.688 60.000 0.00 0.00 46.20 3.46
8295 8647 3.855630 CGGATCAGACCGCTAGAAG 57.144 57.895 0.00 0.00 46.20 2.85
8303 8655 3.917760 CTCGGGCCGGATCAGACC 61.918 72.222 27.98 0.00 0.00 3.85
8304 8656 4.593864 GCTCGGGCCGGATCAGAC 62.594 72.222 27.98 8.41 0.00 3.51
8328 8680 1.003839 TAAACCTGGGAGCGCTGTG 60.004 57.895 18.48 1.00 0.00 3.66
8329 8681 1.003718 GTAAACCTGGGAGCGCTGT 60.004 57.895 18.48 2.03 0.00 4.40
8330 8682 0.392998 ATGTAAACCTGGGAGCGCTG 60.393 55.000 18.48 1.17 0.00 5.18
8331 8683 0.392998 CATGTAAACCTGGGAGCGCT 60.393 55.000 11.27 11.27 0.00 5.92
8332 8684 1.993369 GCATGTAAACCTGGGAGCGC 61.993 60.000 0.00 0.00 0.00 5.92
8333 8685 1.376609 GGCATGTAAACCTGGGAGCG 61.377 60.000 0.00 0.00 0.00 5.03
8334 8686 0.034089 AGGCATGTAAACCTGGGAGC 60.034 55.000 0.00 0.00 34.07 4.70
8335 8687 2.514458 AAGGCATGTAAACCTGGGAG 57.486 50.000 0.00 0.00 36.07 4.30
8336 8688 2.990740 AAAGGCATGTAAACCTGGGA 57.009 45.000 0.00 0.00 36.07 4.37
8354 8706 5.816258 TGTAAGATGTCCACACACGTAAAAA 59.184 36.000 0.00 0.00 34.48 1.94
8355 8707 5.234757 GTGTAAGATGTCCACACACGTAAAA 59.765 40.000 9.41 0.00 41.71 1.52
8356 8708 4.746115 GTGTAAGATGTCCACACACGTAAA 59.254 41.667 9.41 0.00 41.71 2.01
8357 8709 4.038282 AGTGTAAGATGTCCACACACGTAA 59.962 41.667 14.29 0.00 43.96 3.18
8358 8710 3.570975 AGTGTAAGATGTCCACACACGTA 59.429 43.478 14.29 0.00 43.96 3.57
8359 8711 2.364324 AGTGTAAGATGTCCACACACGT 59.636 45.455 14.29 0.00 43.96 4.49
8360 8712 2.987149 GAGTGTAAGATGTCCACACACG 59.013 50.000 14.29 0.00 43.96 4.49
8361 8713 3.006967 AGGAGTGTAAGATGTCCACACAC 59.993 47.826 14.29 9.72 43.96 3.82
8362 8714 3.239449 AGGAGTGTAAGATGTCCACACA 58.761 45.455 14.29 0.00 43.96 3.72
8363 8715 3.963428 AGGAGTGTAAGATGTCCACAC 57.037 47.619 7.17 7.17 42.27 3.82
8364 8716 5.269189 TGATAGGAGTGTAAGATGTCCACA 58.731 41.667 0.00 0.00 0.00 4.17
8365 8717 5.854010 TGATAGGAGTGTAAGATGTCCAC 57.146 43.478 0.00 0.00 0.00 4.02
8366 8718 7.950124 TGATATGATAGGAGTGTAAGATGTCCA 59.050 37.037 0.00 0.00 0.00 4.02
8367 8719 8.247562 GTGATATGATAGGAGTGTAAGATGTCC 58.752 40.741 0.00 0.00 0.00 4.02
8368 8720 8.797438 TGTGATATGATAGGAGTGTAAGATGTC 58.203 37.037 0.00 0.00 0.00 3.06
8369 8721 8.712228 TGTGATATGATAGGAGTGTAAGATGT 57.288 34.615 0.00 0.00 0.00 3.06
8370 8722 9.800433 GATGTGATATGATAGGAGTGTAAGATG 57.200 37.037 0.00 0.00 0.00 2.90
8371 8723 9.539194 TGATGTGATATGATAGGAGTGTAAGAT 57.461 33.333 0.00 0.00 0.00 2.40
8372 8724 8.797438 GTGATGTGATATGATAGGAGTGTAAGA 58.203 37.037 0.00 0.00 0.00 2.10
8373 8725 8.579863 TGTGATGTGATATGATAGGAGTGTAAG 58.420 37.037 0.00 0.00 0.00 2.34
8374 8726 8.477419 TGTGATGTGATATGATAGGAGTGTAA 57.523 34.615 0.00 0.00 0.00 2.41
8375 8727 8.655935 ATGTGATGTGATATGATAGGAGTGTA 57.344 34.615 0.00 0.00 0.00 2.90
8376 8728 6.983906 TGTGATGTGATATGATAGGAGTGT 57.016 37.500 0.00 0.00 0.00 3.55
8377 8729 7.705752 GCTATGTGATGTGATATGATAGGAGTG 59.294 40.741 0.00 0.00 0.00 3.51
8378 8730 7.618907 AGCTATGTGATGTGATATGATAGGAGT 59.381 37.037 0.00 0.00 0.00 3.85
8379 8731 8.009622 AGCTATGTGATGTGATATGATAGGAG 57.990 38.462 0.00 0.00 0.00 3.69
8380 8732 7.968014 AGCTATGTGATGTGATATGATAGGA 57.032 36.000 0.00 0.00 0.00 2.94
8381 8733 8.911965 AGTAGCTATGTGATGTGATATGATAGG 58.088 37.037 0.00 0.00 0.00 2.57
8384 8736 8.911965 CCTAGTAGCTATGTGATGTGATATGAT 58.088 37.037 0.00 0.00 0.00 2.45
8385 8737 7.340487 CCCTAGTAGCTATGTGATGTGATATGA 59.660 40.741 0.00 0.00 0.00 2.15
8386 8738 7.340487 TCCCTAGTAGCTATGTGATGTGATATG 59.660 40.741 0.00 0.00 0.00 1.78
8387 8739 7.414266 TCCCTAGTAGCTATGTGATGTGATAT 58.586 38.462 0.00 0.00 0.00 1.63
8388 8740 6.790319 TCCCTAGTAGCTATGTGATGTGATA 58.210 40.000 0.00 0.00 0.00 2.15
8389 8741 5.645201 TCCCTAGTAGCTATGTGATGTGAT 58.355 41.667 0.00 0.00 0.00 3.06
8390 8742 5.061721 TCCCTAGTAGCTATGTGATGTGA 57.938 43.478 0.00 0.00 0.00 3.58
8391 8743 5.244851 ACATCCCTAGTAGCTATGTGATGTG 59.755 44.000 18.39 8.72 39.85 3.21
8392 8744 5.244851 CACATCCCTAGTAGCTATGTGATGT 59.755 44.000 24.85 15.50 46.57 3.06
8393 8745 5.244851 ACACATCCCTAGTAGCTATGTGATG 59.755 44.000 30.44 18.79 46.57 3.07
8394 8746 5.398236 ACACATCCCTAGTAGCTATGTGAT 58.602 41.667 30.44 19.85 46.57 3.06
8395 8747 4.804597 ACACATCCCTAGTAGCTATGTGA 58.195 43.478 30.44 7.07 46.57 3.58
8397 8749 5.078256 GGTACACATCCCTAGTAGCTATGT 58.922 45.833 0.00 8.90 34.41 2.29
8398 8750 4.156190 CGGTACACATCCCTAGTAGCTATG 59.844 50.000 0.00 7.91 34.91 2.23
8399 8751 4.333690 CGGTACACATCCCTAGTAGCTAT 58.666 47.826 0.00 0.00 34.91 2.97
8400 8752 3.748083 CGGTACACATCCCTAGTAGCTA 58.252 50.000 0.00 0.00 34.91 3.32
8401 8753 2.584236 CGGTACACATCCCTAGTAGCT 58.416 52.381 0.00 0.00 34.91 3.32
8402 8754 1.000496 GCGGTACACATCCCTAGTAGC 60.000 57.143 0.00 0.00 34.02 3.58
8403 8755 2.293677 CAGCGGTACACATCCCTAGTAG 59.706 54.545 0.00 0.00 0.00 2.57
8404 8756 2.304092 CAGCGGTACACATCCCTAGTA 58.696 52.381 0.00 0.00 0.00 1.82
8405 8757 1.112113 CAGCGGTACACATCCCTAGT 58.888 55.000 0.00 0.00 0.00 2.57
8406 8758 0.249489 GCAGCGGTACACATCCCTAG 60.249 60.000 0.00 0.00 0.00 3.02
8407 8759 0.973496 TGCAGCGGTACACATCCCTA 60.973 55.000 0.00 0.00 0.00 3.53
8408 8760 1.836999 TTGCAGCGGTACACATCCCT 61.837 55.000 0.00 0.00 0.00 4.20
8409 8761 1.376683 TTGCAGCGGTACACATCCC 60.377 57.895 0.00 0.00 0.00 3.85
8410 8762 0.673644 AGTTGCAGCGGTACACATCC 60.674 55.000 0.00 0.00 0.00 3.51
8411 8763 0.721718 GAGTTGCAGCGGTACACATC 59.278 55.000 0.00 0.00 0.00 3.06
8412 8764 0.034756 TGAGTTGCAGCGGTACACAT 59.965 50.000 0.00 0.00 0.00 3.21
8413 8765 0.599991 CTGAGTTGCAGCGGTACACA 60.600 55.000 0.00 0.00 37.90 3.72
8414 8766 2.153913 CTGAGTTGCAGCGGTACAC 58.846 57.895 0.00 0.00 37.90 2.90
8415 8767 4.673403 CTGAGTTGCAGCGGTACA 57.327 55.556 0.00 0.00 37.90 2.90
8422 8774 3.433615 GGCTAGTAACAACTGAGTTGCAG 59.566 47.826 24.08 14.09 46.20 4.41
8423 8775 3.399330 GGCTAGTAACAACTGAGTTGCA 58.601 45.455 24.08 10.42 46.20 4.08
8424 8776 2.412089 CGGCTAGTAACAACTGAGTTGC 59.588 50.000 24.08 8.96 46.20 4.17
8426 8778 3.305881 GGTCGGCTAGTAACAACTGAGTT 60.306 47.826 0.00 0.00 35.55 3.01
8427 8779 2.230750 GGTCGGCTAGTAACAACTGAGT 59.769 50.000 0.00 0.00 0.00 3.41
8428 8780 2.731341 CGGTCGGCTAGTAACAACTGAG 60.731 54.545 0.00 0.00 0.00 3.35
8429 8781 1.200716 CGGTCGGCTAGTAACAACTGA 59.799 52.381 0.00 0.00 0.00 3.41
8430 8782 1.200716 TCGGTCGGCTAGTAACAACTG 59.799 52.381 0.00 0.00 0.00 3.16
8431 8783 1.538047 TCGGTCGGCTAGTAACAACT 58.462 50.000 0.00 0.00 0.00 3.16
8432 8784 1.988467 GTTCGGTCGGCTAGTAACAAC 59.012 52.381 0.00 0.00 0.00 3.32
8433 8785 1.067635 GGTTCGGTCGGCTAGTAACAA 60.068 52.381 0.00 0.00 0.00 2.83
8434 8786 0.527565 GGTTCGGTCGGCTAGTAACA 59.472 55.000 0.00 0.00 0.00 2.41
8435 8787 0.179127 GGGTTCGGTCGGCTAGTAAC 60.179 60.000 0.00 0.00 0.00 2.50
8436 8788 0.611618 TGGGTTCGGTCGGCTAGTAA 60.612 55.000 0.00 0.00 0.00 2.24
8437 8789 1.001020 TGGGTTCGGTCGGCTAGTA 60.001 57.895 0.00 0.00 0.00 1.82
8438 8790 2.283388 TGGGTTCGGTCGGCTAGT 60.283 61.111 0.00 0.00 0.00 2.57
8439 8791 2.494918 CTGGGTTCGGTCGGCTAG 59.505 66.667 0.00 0.00 0.00 3.42
8440 8792 3.766691 GCTGGGTTCGGTCGGCTA 61.767 66.667 0.00 0.00 32.87 3.93
8443 8795 4.760047 CCAGCTGGGTTCGGTCGG 62.760 72.222 26.14 0.00 0.00 4.79
8452 8804 2.977772 TTTTGACAAAACCAGCTGGG 57.022 45.000 35.42 20.37 44.81 4.45
8453 8805 7.872483 AGTATTTATTTTGACAAAACCAGCTGG 59.128 33.333 31.60 31.60 42.17 4.85
8454 8806 8.816640 AGTATTTATTTTGACAAAACCAGCTG 57.183 30.769 15.36 6.78 32.37 4.24
8477 8829 9.539825 TTGCAACATGTCAACAAATTATTTAGT 57.460 25.926 0.00 0.00 0.00 2.24
8480 8832 9.275398 AGATTGCAACATGTCAACAAATTATTT 57.725 25.926 0.00 0.00 0.00 1.40
8481 8833 8.714179 CAGATTGCAACATGTCAACAAATTATT 58.286 29.630 0.00 0.00 0.00 1.40
8482 8834 7.332430 CCAGATTGCAACATGTCAACAAATTAT 59.668 33.333 0.00 0.00 0.00 1.28
8483 8835 6.645827 CCAGATTGCAACATGTCAACAAATTA 59.354 34.615 0.00 0.00 0.00 1.40
8484 8836 5.467399 CCAGATTGCAACATGTCAACAAATT 59.533 36.000 0.00 0.00 0.00 1.82
8485 8837 4.992319 CCAGATTGCAACATGTCAACAAAT 59.008 37.500 0.00 0.00 0.00 2.32
8486 8838 4.370049 CCAGATTGCAACATGTCAACAAA 58.630 39.130 0.00 0.00 0.00 2.83
8487 8839 3.243805 CCCAGATTGCAACATGTCAACAA 60.244 43.478 0.00 4.67 0.00 2.83
8488 8840 2.296752 CCCAGATTGCAACATGTCAACA 59.703 45.455 0.00 0.00 0.00 3.33
8489 8841 2.927871 GCCCAGATTGCAACATGTCAAC 60.928 50.000 0.00 0.00 0.00 3.18
8490 8842 1.273048 GCCCAGATTGCAACATGTCAA 59.727 47.619 0.00 0.00 0.00 3.18
8491 8843 0.889994 GCCCAGATTGCAACATGTCA 59.110 50.000 0.00 0.00 0.00 3.58
8492 8844 0.179156 CGCCCAGATTGCAACATGTC 60.179 55.000 0.00 0.00 0.00 3.06
8493 8845 1.885157 CGCCCAGATTGCAACATGT 59.115 52.632 0.00 0.00 0.00 3.21
8494 8846 1.517694 GCGCCCAGATTGCAACATG 60.518 57.895 0.00 3.20 0.00 3.21
8495 8847 2.713967 GGCGCCCAGATTGCAACAT 61.714 57.895 18.11 0.00 0.00 2.71
8496 8848 2.476852 TAGGCGCCCAGATTGCAACA 62.477 55.000 26.15 0.00 0.00 3.33
8497 8849 1.748879 TAGGCGCCCAGATTGCAAC 60.749 57.895 26.15 0.00 0.00 4.17
8498 8850 1.748879 GTAGGCGCCCAGATTGCAA 60.749 57.895 26.15 0.00 0.00 4.08
8499 8851 2.124736 GTAGGCGCCCAGATTGCA 60.125 61.111 26.15 0.00 0.00 4.08
8500 8852 1.718757 CTTGTAGGCGCCCAGATTGC 61.719 60.000 26.15 8.49 0.00 3.56
8501 8853 1.097547 CCTTGTAGGCGCCCAGATTG 61.098 60.000 26.15 9.44 0.00 2.67
8502 8854 1.224592 CCTTGTAGGCGCCCAGATT 59.775 57.895 26.15 6.59 0.00 2.40
8503 8855 2.911143 CCTTGTAGGCGCCCAGAT 59.089 61.111 26.15 7.06 0.00 2.90
8512 8864 1.586154 CGTTGCCCAAGCCTTGTAGG 61.586 60.000 3.37 0.00 38.69 3.18
8513 8865 0.605319 TCGTTGCCCAAGCCTTGTAG 60.605 55.000 3.37 0.00 38.69 2.74
8514 8866 0.037590 ATCGTTGCCCAAGCCTTGTA 59.962 50.000 3.37 0.00 38.69 2.41
8515 8867 1.228552 ATCGTTGCCCAAGCCTTGT 60.229 52.632 3.37 0.00 38.69 3.16
8516 8868 1.213537 CATCGTTGCCCAAGCCTTG 59.786 57.895 0.00 0.00 38.69 3.61
8517 8869 0.827507 AACATCGTTGCCCAAGCCTT 60.828 50.000 0.00 0.00 38.69 4.35
8518 8870 0.037590 TAACATCGTTGCCCAAGCCT 59.962 50.000 0.00 0.00 38.69 4.58
8519 8871 0.170339 GTAACATCGTTGCCCAAGCC 59.830 55.000 0.00 0.00 38.69 4.35
8520 8872 0.878416 TGTAACATCGTTGCCCAAGC 59.122 50.000 0.00 0.00 40.48 4.01
8521 8873 3.305110 GTTTGTAACATCGTTGCCCAAG 58.695 45.455 0.00 0.00 0.00 3.61
8522 8874 2.034812 GGTTTGTAACATCGTTGCCCAA 59.965 45.455 0.00 0.00 0.00 4.12
8523 8875 1.609555 GGTTTGTAACATCGTTGCCCA 59.390 47.619 0.00 0.00 0.00 5.36
8524 8876 1.068125 GGGTTTGTAACATCGTTGCCC 60.068 52.381 0.00 0.00 0.00 5.36
8525 8877 1.400500 CGGGTTTGTAACATCGTTGCC 60.400 52.381 0.00 0.00 0.00 4.52
8526 8878 1.400500 CCGGGTTTGTAACATCGTTGC 60.400 52.381 0.00 0.00 0.00 4.17
8527 8879 2.096119 GTCCGGGTTTGTAACATCGTTG 60.096 50.000 0.00 0.00 0.00 4.10
8528 8880 2.145536 GTCCGGGTTTGTAACATCGTT 58.854 47.619 0.00 0.00 0.00 3.85
8529 8881 1.070445 TGTCCGGGTTTGTAACATCGT 59.930 47.619 0.00 0.00 0.00 3.73
8530 8882 1.461897 GTGTCCGGGTTTGTAACATCG 59.538 52.381 0.00 0.00 0.00 3.84
8531 8883 1.461897 CGTGTCCGGGTTTGTAACATC 59.538 52.381 0.00 0.00 0.00 3.06
8532 8884 1.202675 ACGTGTCCGGGTTTGTAACAT 60.203 47.619 0.00 0.00 38.78 2.71
8533 8885 0.177604 ACGTGTCCGGGTTTGTAACA 59.822 50.000 0.00 0.00 38.78 2.41
8534 8886 0.582960 CACGTGTCCGGGTTTGTAAC 59.417 55.000 7.58 0.00 38.78 2.50
8535 8887 0.463204 TCACGTGTCCGGGTTTGTAA 59.537 50.000 16.51 0.00 39.02 2.41
8536 8888 0.249405 GTCACGTGTCCGGGTTTGTA 60.249 55.000 16.51 0.00 39.02 2.41
8537 8889 1.522130 GTCACGTGTCCGGGTTTGT 60.522 57.895 16.51 0.00 39.02 2.83
8538 8890 2.591311 CGTCACGTGTCCGGGTTTG 61.591 63.158 16.51 0.00 39.02 2.93
8539 8891 2.279650 CGTCACGTGTCCGGGTTT 60.280 61.111 16.51 0.00 39.02 3.27
8540 8892 1.733402 TAACGTCACGTGTCCGGGTT 61.733 55.000 25.61 19.38 39.99 4.11
8541 8893 1.526575 ATAACGTCACGTGTCCGGGT 61.527 55.000 25.61 18.17 39.99 5.28
8542 8894 0.451383 TATAACGTCACGTGTCCGGG 59.549 55.000 25.61 11.91 39.99 5.73
8543 8895 2.179589 CTTATAACGTCACGTGTCCGG 58.820 52.381 25.61 13.33 39.99 5.14
8544 8896 2.179589 CCTTATAACGTCACGTGTCCG 58.820 52.381 22.30 22.30 39.99 4.79
8545 8897 3.221964 ACCTTATAACGTCACGTGTCC 57.778 47.619 16.51 6.68 39.99 4.02
8546 8898 4.795278 CCTTACCTTATAACGTCACGTGTC 59.205 45.833 16.51 9.31 39.99 3.67
8547 8899 4.737054 CCTTACCTTATAACGTCACGTGT 58.263 43.478 16.51 0.00 39.99 4.49
8548 8900 3.549070 GCCTTACCTTATAACGTCACGTG 59.451 47.826 9.94 9.94 39.99 4.49
8549 8901 3.429410 GGCCTTACCTTATAACGTCACGT 60.429 47.826 0.00 0.00 37.24 4.49
8550 8902 3.118542 GGCCTTACCTTATAACGTCACG 58.881 50.000 0.00 0.00 34.51 4.35
8551 8903 4.127566 TGGCCTTACCTTATAACGTCAC 57.872 45.455 3.32 0.00 40.22 3.67
8552 8904 4.822685 TTGGCCTTACCTTATAACGTCA 57.177 40.909 3.32 0.00 40.22 4.35
8553 8905 4.446719 CGATTGGCCTTACCTTATAACGTC 59.553 45.833 3.32 0.00 40.22 4.34
8554 8906 4.141869 ACGATTGGCCTTACCTTATAACGT 60.142 41.667 3.32 0.00 40.22 3.99
8555 8907 4.374399 ACGATTGGCCTTACCTTATAACG 58.626 43.478 3.32 0.00 40.22 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.