Multiple sequence alignment - TraesCS3D01G212800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G212800 chr3D 100.000 5365 0 0 1 5365 286671144 286676508 0.000000e+00 9908.0
1 TraesCS3D01G212800 chr3D 85.174 344 17 11 4903 5213 83706331 83706673 6.700000e-84 322.0
2 TraesCS3D01G212800 chr3B 93.444 2700 110 20 2184 4852 379221030 379223693 0.000000e+00 3943.0
3 TraesCS3D01G212800 chr3B 93.612 1581 51 16 426 1986 379219481 379221031 0.000000e+00 2314.0
4 TraesCS3D01G212800 chr3A 96.469 2124 51 10 2541 4640 374677497 374679620 0.000000e+00 3485.0
5 TraesCS3D01G212800 chr3A 92.580 2264 112 25 286 2502 374675244 374677498 0.000000e+00 3199.0
6 TraesCS3D01G212800 chr3A 82.748 313 32 6 1 300 374673190 374673493 5.330000e-65 259.0
7 TraesCS3D01G212800 chr3A 94.318 88 5 0 4636 4723 374679924 374680011 9.370000e-28 135.0
8 TraesCS3D01G212800 chr3A 88.889 81 5 1 4751 4831 374680166 374680242 4.420000e-16 97.1
9 TraesCS3D01G212800 chr1D 85.672 335 17 11 4905 5213 314430061 314429732 1.860000e-84 324.0
10 TraesCS3D01G212800 chr4B 88.123 261 12 9 780 1031 399269999 399270249 5.260000e-75 292.0
11 TraesCS3D01G212800 chr4B 87.273 165 19 2 4905 5067 490672942 490672778 2.550000e-43 187.0
12 TraesCS3D01G212800 chr4B 89.726 146 12 3 4904 5048 644578054 644578197 3.300000e-42 183.0
13 TraesCS3D01G212800 chr2B 85.837 233 23 7 4905 5133 664409303 664409529 6.940000e-59 239.0
14 TraesCS3D01G212800 chr2B 81.498 227 32 6 4908 5133 184820709 184820926 1.540000e-40 178.0
15 TraesCS3D01G212800 chr2A 85.590 229 24 6 4906 5133 103366420 103366640 1.160000e-56 231.0
16 TraesCS3D01G212800 chr1B 85.714 231 20 11 4908 5133 173596630 173596408 1.160000e-56 231.0
17 TraesCS3D01G212800 chr7B 84.454 238 22 7 4902 5133 449508753 449508525 2.520000e-53 220.0
18 TraesCS3D01G212800 chr6D 81.749 263 31 10 148 396 125088448 125088189 2.530000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G212800 chr3D 286671144 286676508 5364 False 9908.00 9908 100.0000 1 5365 1 chr3D.!!$F2 5364
1 TraesCS3D01G212800 chr3B 379219481 379223693 4212 False 3128.50 3943 93.5280 426 4852 2 chr3B.!!$F1 4426
2 TraesCS3D01G212800 chr3A 374673190 374680242 7052 False 1435.02 3485 91.0008 1 4831 5 chr3A.!!$F1 4830

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 134 0.458669 GCTGAGGGAATGCAACATGG 59.541 55.000 0.00 0.00 0.00 3.66 F
1419 3229 0.664166 GTTTCAACATGTGCTGGGCG 60.664 55.000 0.00 0.00 0.00 6.13 F
1430 3240 1.004918 GCTGGGCGTTGTCTACTGT 60.005 57.895 0.00 0.00 0.00 3.55 F
1845 3656 1.068588 TCTGGTGAGTCCGTTTCACTG 59.931 52.381 9.93 5.39 43.44 3.66 F
2114 3925 1.372004 CAACCAATGTGCGGTGCTG 60.372 57.895 0.00 0.00 36.67 4.41 F
3392 5225 0.673956 GGGTTCTCGGCTGGAAGTTC 60.674 60.000 0.00 0.00 35.30 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1430 3240 1.280457 ACCCAAAGTGCCCACAAAAA 58.720 45.000 0.82 0.00 0.00 1.94 R
3279 5111 0.539986 GACTCCCCTCGGCATAACAA 59.460 55.000 0.00 0.00 0.00 2.83 R
3333 5166 1.618343 GCTCCCCTTGCAGCTTTTTAA 59.382 47.619 0.00 0.00 32.48 1.52 R
3392 5225 2.770164 AAGTCACGGAATCCAGAAGG 57.230 50.000 0.00 0.00 0.00 3.46 R
4107 5947 0.944386 AATGTCGCCACTGTGAACAC 59.056 50.000 9.86 2.92 31.62 3.32 R
5329 7638 0.031857 TGGTTGAGCACGGCAATTTG 59.968 50.000 0.00 0.00 0.00 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.341581 GCCAGGCCCAATGGTACTTTA 60.342 52.381 10.98 0.00 40.17 1.85
40 41 2.886391 GCCAGGCCCAATGGTACTTTAA 60.886 50.000 10.98 0.00 40.17 1.52
41 42 3.642141 CCAGGCCCAATGGTACTTTAAT 58.358 45.455 0.00 0.00 32.85 1.40
84 85 7.017498 TGTACACGTGAAACATTAAACACAT 57.983 32.000 25.01 0.00 35.74 3.21
89 90 7.378461 ACACGTGAAACATTAAACACATTCATC 59.622 33.333 25.01 0.00 35.74 2.92
114 115 2.444696 TGGGACAAATGGCCTGGG 59.555 61.111 3.32 0.00 44.77 4.45
115 116 3.076916 GGGACAAATGGCCTGGGC 61.077 66.667 14.23 14.23 44.77 5.36
122 123 4.765970 ATGGCCTGGGCTGAGGGA 62.766 66.667 21.72 0.00 41.60 4.20
133 134 0.458669 GCTGAGGGAATGCAACATGG 59.541 55.000 0.00 0.00 0.00 3.66
147 148 1.216064 ACATGGCCCTAAGAGCATGA 58.784 50.000 0.00 0.00 0.00 3.07
152 153 1.478288 GGCCCTAAGAGCATGAGCATT 60.478 52.381 0.00 0.00 45.49 3.56
160 161 7.094890 CCCTAAGAGCATGAGCATTGTTAATAG 60.095 40.741 0.00 0.00 45.49 1.73
166 167 8.783833 AGCATGAGCATTGTTAATAGTATAGG 57.216 34.615 0.00 0.00 45.49 2.57
167 168 8.378565 AGCATGAGCATTGTTAATAGTATAGGT 58.621 33.333 0.00 0.00 45.49 3.08
191 192 7.169982 GGTAACTGCTGACTATATGATGTTGTC 59.830 40.741 0.00 0.00 0.00 3.18
207 218 8.652810 TGATGTTGTCATGTCATCACTTATAG 57.347 34.615 15.53 0.00 41.59 1.31
218 229 7.639945 TGTCATCACTTATAGTCACTCATACG 58.360 38.462 0.00 0.00 0.00 3.06
220 231 8.508062 GTCATCACTTATAGTCACTCATACGAT 58.492 37.037 0.00 0.00 0.00 3.73
224 235 9.000486 TCACTTATAGTCACTCATACGATAAGG 58.000 37.037 15.65 8.43 42.26 2.69
238 249 9.592196 TCATACGATAAGGTTAACTATAGGGTT 57.408 33.333 5.42 0.00 0.00 4.11
239 250 9.635520 CATACGATAAGGTTAACTATAGGGTTG 57.364 37.037 5.42 0.00 0.00 3.77
240 251 7.059202 ACGATAAGGTTAACTATAGGGTTGG 57.941 40.000 5.42 0.00 0.00 3.77
241 252 6.612863 ACGATAAGGTTAACTATAGGGTTGGT 59.387 38.462 5.42 0.00 0.00 3.67
242 253 7.126268 ACGATAAGGTTAACTATAGGGTTGGTT 59.874 37.037 5.42 0.00 0.00 3.67
315 2091 9.542462 TTATTGCATTTGTCTAGGAGTACATAC 57.458 33.333 0.00 0.00 0.00 2.39
320 2096 7.329717 GCATTTGTCTAGGAGTACATACATAGC 59.670 40.741 0.00 0.00 0.00 2.97
325 2101 8.827758 TGTCTAGGAGTACATACATAGCTAGAT 58.172 37.037 0.00 0.00 0.00 1.98
331 2107 8.713271 GGAGTACATACATAGCTAGATTTTTGC 58.287 37.037 0.00 0.00 0.00 3.68
343 2119 2.494870 AGATTTTTGCATGAGAGCCCAC 59.505 45.455 0.00 0.00 0.00 4.61
346 2122 1.999648 TTTGCATGAGAGCCCACTTT 58.000 45.000 0.00 0.00 0.00 2.66
349 2125 1.005097 TGCATGAGAGCCCACTTTCAT 59.995 47.619 0.00 0.00 45.93 2.57
357 2133 5.047802 TGAGAGCCCACTTTCATCATTTTTC 60.048 40.000 0.00 0.00 32.38 2.29
359 2135 4.886579 AGCCCACTTTCATCATTTTTCAC 58.113 39.130 0.00 0.00 0.00 3.18
379 2155 1.883275 CGTCTCTCTTCTCCACAGTGT 59.117 52.381 0.00 0.00 0.00 3.55
386 2162 4.162320 TCTCTTCTCCACAGTGTCAAAAGT 59.838 41.667 0.00 0.00 0.00 2.66
387 2163 4.191544 TCTTCTCCACAGTGTCAAAAGTG 58.808 43.478 0.00 0.00 0.00 3.16
388 2164 2.288666 TCTCCACAGTGTCAAAAGTGC 58.711 47.619 0.00 0.00 0.00 4.40
410 2191 4.381079 GCCATGTAAACGGGCTTTCATTAA 60.381 41.667 8.01 0.00 44.32 1.40
418 2199 9.659830 GTAAACGGGCTTTCATTAATATACTTG 57.340 33.333 0.00 0.00 0.00 3.16
421 2202 6.320164 ACGGGCTTTCATTAATATACTTGCAA 59.680 34.615 0.00 0.00 0.00 4.08
422 2203 6.857964 CGGGCTTTCATTAATATACTTGCAAG 59.142 38.462 24.84 24.84 0.00 4.01
423 2204 7.468631 CGGGCTTTCATTAATATACTTGCAAGT 60.469 37.037 32.97 32.97 42.91 3.16
444 2228 6.331170 AGTCTTTTTGCAAAACACGAAATC 57.669 33.333 23.79 9.26 0.00 2.17
478 2262 7.559533 TGGCCTTGTATATGCTTGAAAATCTTA 59.440 33.333 3.32 0.00 0.00 2.10
479 2263 8.413229 GGCCTTGTATATGCTTGAAAATCTTAA 58.587 33.333 0.00 0.00 0.00 1.85
480 2264 9.971922 GCCTTGTATATGCTTGAAAATCTTAAT 57.028 29.630 0.00 0.00 0.00 1.40
633 2417 3.730761 GCCAGTGCTGTTGCCTCG 61.731 66.667 0.00 0.00 38.71 4.63
779 2568 6.899393 AGAGAGATTAGATTGTAGCAGAGG 57.101 41.667 0.00 0.00 0.00 3.69
790 2579 3.512516 GCAGAGGGCAATCCACGC 61.513 66.667 0.00 0.00 43.97 5.34
829 2618 8.548877 AGAAAATGGAGGATAGTGTAAAAGCTA 58.451 33.333 0.00 0.00 0.00 3.32
865 2655 7.676947 CGGGGGAGAAGAGATAACAATAATAA 58.323 38.462 0.00 0.00 0.00 1.40
921 2712 8.803201 AGCGAAATAAAAAGAAGAAAGGAAAG 57.197 30.769 0.00 0.00 0.00 2.62
1166 2959 7.387180 CGATTACTCGTCTTCTGATTTTTCTG 58.613 38.462 0.00 0.00 40.07 3.02
1374 3168 5.049336 TCTGTTCATTTCGCGGTTAAATTCA 60.049 36.000 6.13 4.06 0.00 2.57
1419 3229 0.664166 GTTTCAACATGTGCTGGGCG 60.664 55.000 0.00 0.00 0.00 6.13
1424 3234 1.795170 AACATGTGCTGGGCGTTGTC 61.795 55.000 0.00 0.00 0.00 3.18
1430 3240 1.004918 GCTGGGCGTTGTCTACTGT 60.005 57.895 0.00 0.00 0.00 3.55
1543 3353 2.936498 CGAATGTCTGTATGTGGGGAAC 59.064 50.000 0.00 0.00 0.00 3.62
1649 3460 1.681780 GGTGCCAGTAAGCTATTGCCA 60.682 52.381 0.00 0.00 40.80 4.92
1753 3564 2.201732 CAGGATGTGCCGTATGTGTAC 58.798 52.381 0.00 0.00 43.43 2.90
1837 3648 4.035792 CACTACTATCTTCTGGTGAGTCCG 59.964 50.000 0.00 0.00 39.52 4.79
1843 3654 2.135933 CTTCTGGTGAGTCCGTTTCAC 58.864 52.381 3.40 3.40 43.25 3.18
1845 3656 1.068588 TCTGGTGAGTCCGTTTCACTG 59.931 52.381 9.93 5.39 43.44 3.66
1893 3704 4.171005 CTGTGCTGGTTTCATTGCTTATG 58.829 43.478 0.00 0.00 35.45 1.90
1897 3708 4.168760 GCTGGTTTCATTGCTTATGTGTC 58.831 43.478 0.00 0.00 35.64 3.67
1918 3729 9.750125 TGTGTCATAGCTTAGTATCATTGTTAG 57.250 33.333 0.00 0.00 0.00 2.34
1974 3785 8.903723 GCTATAAAGTGTCAACGTCAGTATATC 58.096 37.037 0.00 0.00 0.00 1.63
1984 3795 9.395707 GTCAACGTCAGTATATCCTGTAATAAG 57.604 37.037 0.00 0.00 34.02 1.73
1997 3808 6.143206 TCCTGTAATAAGGATGAGTGGATCA 58.857 40.000 0.00 0.00 41.60 2.92
2035 3846 3.482436 TGTGCCGACTTATTTTGGACTT 58.518 40.909 0.00 0.00 0.00 3.01
2038 3849 5.180492 TGTGCCGACTTATTTTGGACTTAAG 59.820 40.000 0.00 0.00 0.00 1.85
2097 3908 1.974236 CCCCAAATGGCCAAACTTACA 59.026 47.619 10.96 0.00 0.00 2.41
2100 3911 3.398406 CCAAATGGCCAAACTTACAACC 58.602 45.455 10.96 0.00 0.00 3.77
2103 3914 4.972751 AATGGCCAAACTTACAACCAAT 57.027 36.364 10.96 0.00 0.00 3.16
2107 3918 2.799978 GCCAAACTTACAACCAATGTGC 59.200 45.455 0.00 0.00 43.77 4.57
2114 3925 1.372004 CAACCAATGTGCGGTGCTG 60.372 57.895 0.00 0.00 36.67 4.41
2117 3928 4.424566 CAATGTGCGGTGCTGGGC 62.425 66.667 0.00 0.00 0.00 5.36
2144 3955 5.306419 ACCAGCTTAGAATGATGATAGCTCA 59.694 40.000 0.00 0.00 36.88 4.26
2157 3968 6.541278 TGATGATAGCTCACAAAAGAGAATGG 59.459 38.462 0.00 0.00 37.87 3.16
2296 4123 3.517901 CCGGATATGTAGGGCCTATTTCA 59.482 47.826 17.90 10.73 0.00 2.69
2298 4125 5.118990 CGGATATGTAGGGCCTATTTCATG 58.881 45.833 17.90 1.00 0.00 3.07
2406 4233 7.466804 TGAAAGGAGTTTCCAGTGGTATAATT 58.533 34.615 9.54 0.00 41.37 1.40
2465 4292 6.898041 TGTTGACAATCAAAGTAAATCTCGG 58.102 36.000 0.00 0.00 38.22 4.63
2656 4483 7.195839 AGCTGACATTCTAGTTCTTTTTCAC 57.804 36.000 0.00 0.00 0.00 3.18
2704 4531 7.581213 TGTTTGTTCCTAGTTCAAATGACAT 57.419 32.000 7.23 0.00 34.41 3.06
3183 5014 7.490657 TTCTTAGGAAAGCACCATCTTAGTA 57.509 36.000 0.00 0.00 32.36 1.82
3236 5068 4.616802 GTGCTTGTTGAAATTGTATGACGG 59.383 41.667 0.00 0.00 0.00 4.79
3279 5111 6.692486 CCTTACAATGACTACTCTGTTGTCT 58.308 40.000 11.91 0.00 38.64 3.41
3392 5225 0.673956 GGGTTCTCGGCTGGAAGTTC 60.674 60.000 0.00 0.00 35.30 3.01
3404 5237 3.615155 CTGGAAGTTCCTTCTGGATTCC 58.385 50.000 22.41 9.39 45.34 3.01
3811 5645 2.029073 AGTGGTGCTCGTTGACCG 59.971 61.111 0.00 0.00 34.69 4.79
3903 5743 5.699097 TGCCTGTTACCAATTGTAGTTTC 57.301 39.130 4.43 0.00 0.00 2.78
3931 5771 4.141597 CCTCCCATCTTCTTTACTTCCTCC 60.142 50.000 0.00 0.00 0.00 4.30
3950 5790 5.021458 CCTCCAAGTGTCTACTTACCCTTA 58.979 45.833 0.00 0.00 45.12 2.69
4196 6036 2.812011 CCAAGTACTAAAGGTGTGTGCC 59.188 50.000 0.00 0.00 0.00 5.01
4250 6090 0.396435 TGATGCCCAGACAAGTCGTT 59.604 50.000 0.00 0.00 34.09 3.85
4321 6161 0.179100 AAGGAGCACATGGACGATCG 60.179 55.000 14.88 14.88 0.00 3.69
4328 6168 1.953138 CATGGACGATCGCTCAGGC 60.953 63.158 16.60 0.95 0.00 4.85
4341 6181 0.035152 CTCAGGCAACCACCAGCATA 60.035 55.000 0.00 0.00 37.17 3.14
4354 6194 0.390492 CAGCATACATCCGAGGAGCA 59.610 55.000 0.00 0.00 0.00 4.26
4391 6231 1.202132 TGATTTGGCGCGCAAGATTAC 60.202 47.619 34.42 14.17 43.02 1.89
4397 6237 1.467374 GGCGCGCAAGATTACATTGTT 60.467 47.619 34.42 0.00 43.02 2.83
4410 6259 8.911918 AGATTACATTGTTTGGTTACTGTGTA 57.088 30.769 0.00 0.00 0.00 2.90
4427 6276 4.196193 TGTGTAACCTTGTTCCTTCTGTG 58.804 43.478 0.00 0.00 34.36 3.66
4428 6277 3.564225 GTGTAACCTTGTTCCTTCTGTGG 59.436 47.826 0.00 0.00 0.00 4.17
4455 6304 6.992063 AAGTTGCTATCGATGAATGTTCTT 57.008 33.333 8.54 1.77 0.00 2.52
4504 6353 0.033642 GGTGGGATCGCTAGTTAGGC 59.966 60.000 11.46 0.00 0.00 3.93
4513 6371 1.469940 CGCTAGTTAGGCTGTGTGGAG 60.470 57.143 0.00 0.00 0.00 3.86
4574 6432 5.755409 TTATGCCAACTTTGTCTCTAGGA 57.245 39.130 0.00 0.00 0.00 2.94
4600 6458 0.664761 ATGTGTGTTGAGTGTGCTGC 59.335 50.000 0.00 0.00 0.00 5.25
4666 6834 2.086869 GACATGGTTATGCAGTGCAGT 58.913 47.619 24.20 13.60 43.65 4.40
4695 6863 6.595682 TCATCTGGGTTCAATTCCTAGAATC 58.404 40.000 2.44 0.00 43.67 2.52
4723 7032 5.977129 GTGTTATTCCCGCATTTTATTCCTG 59.023 40.000 0.00 0.00 0.00 3.86
4737 7046 2.276732 TTCCTGAAGGACCAAGCTTG 57.723 50.000 19.93 19.93 45.39 4.01
4755 7064 2.988010 TGGTGCACTATGAGATCACC 57.012 50.000 17.98 11.97 45.43 4.02
4835 7144 2.107950 TGGCGGGACTACAAATCAAG 57.892 50.000 0.00 0.00 0.00 3.02
4839 7148 4.058817 GGCGGGACTACAAATCAAGATAG 58.941 47.826 0.00 0.00 0.00 2.08
4866 7175 9.614792 AATCATGTTACTCATACTTAAAGGACC 57.385 33.333 0.00 0.00 34.67 4.46
4867 7176 7.562135 TCATGTTACTCATACTTAAAGGACCC 58.438 38.462 0.00 0.00 34.67 4.46
4868 7177 7.402071 TCATGTTACTCATACTTAAAGGACCCT 59.598 37.037 0.00 0.00 34.67 4.34
4869 7178 8.701895 CATGTTACTCATACTTAAAGGACCCTA 58.298 37.037 0.00 0.00 34.67 3.53
4870 7179 8.669055 TGTTACTCATACTTAAAGGACCCTAA 57.331 34.615 0.00 0.00 0.00 2.69
4871 7180 9.275572 TGTTACTCATACTTAAAGGACCCTAAT 57.724 33.333 0.00 0.00 0.00 1.73
4875 7184 9.900112 ACTCATACTTAAAGGACCCTAATATCT 57.100 33.333 0.00 0.00 0.00 1.98
4877 7186 9.101325 TCATACTTAAAGGACCCTAATATCTGG 57.899 37.037 0.00 0.00 0.00 3.86
4878 7187 6.189036 ACTTAAAGGACCCTAATATCTGGC 57.811 41.667 0.00 0.00 0.00 4.85
4879 7188 5.911766 ACTTAAAGGACCCTAATATCTGGCT 59.088 40.000 0.00 0.00 0.00 4.75
4880 7189 4.713792 AAAGGACCCTAATATCTGGCTG 57.286 45.455 0.00 0.00 0.00 4.85
4881 7190 3.352611 AGGACCCTAATATCTGGCTGT 57.647 47.619 0.00 0.00 0.00 4.40
4882 7191 3.243724 AGGACCCTAATATCTGGCTGTC 58.756 50.000 0.00 0.00 0.00 3.51
4883 7192 2.028930 GGACCCTAATATCTGGCTGTCG 60.029 54.545 0.00 0.00 0.00 4.35
4884 7193 1.344763 ACCCTAATATCTGGCTGTCGC 59.655 52.381 0.00 0.00 0.00 5.19
4902 7211 3.490759 CAGCCTCGCGCGAATGTT 61.491 61.111 33.99 21.85 44.76 2.71
4903 7212 2.742372 AGCCTCGCGCGAATGTTT 60.742 55.556 33.99 16.25 44.76 2.83
4904 7213 2.175811 GCCTCGCGCGAATGTTTT 59.824 55.556 33.99 0.00 0.00 2.43
4905 7214 1.442017 GCCTCGCGCGAATGTTTTT 60.442 52.632 33.99 0.00 0.00 1.94
4933 7242 8.477419 TTTTTGAAATGAAAGGTAGATGAGGT 57.523 30.769 0.00 0.00 0.00 3.85
4934 7243 8.477419 TTTTGAAATGAAAGGTAGATGAGGTT 57.523 30.769 0.00 0.00 0.00 3.50
4935 7244 7.687941 TTGAAATGAAAGGTAGATGAGGTTC 57.312 36.000 0.00 0.00 0.00 3.62
4936 7245 7.020827 TGAAATGAAAGGTAGATGAGGTTCT 57.979 36.000 0.00 0.00 0.00 3.01
4937 7246 8.146053 TGAAATGAAAGGTAGATGAGGTTCTA 57.854 34.615 0.00 0.00 0.00 2.10
4938 7247 8.041323 TGAAATGAAAGGTAGATGAGGTTCTAC 58.959 37.037 3.56 3.56 44.84 2.59
4964 7273 9.480053 CCTTATATATTTCAAAACATGCCAAGG 57.520 33.333 0.00 0.00 0.00 3.61
4965 7274 8.885494 TTATATATTTCAAAACATGCCAAGGC 57.115 30.769 3.61 3.61 42.35 4.35
4966 7275 2.252976 TTTCAAAACATGCCAAGGCC 57.747 45.000 8.89 0.00 41.09 5.19
4967 7276 1.422531 TTCAAAACATGCCAAGGCCT 58.577 45.000 0.00 0.00 41.09 5.19
4968 7277 0.680618 TCAAAACATGCCAAGGCCTG 59.319 50.000 5.69 13.78 41.42 4.85
4970 7279 1.482748 AAAACATGCCAAGGCCTGGG 61.483 55.000 23.56 23.56 46.54 4.45
4975 7284 4.748144 GCCAAGGCCTGGGACCAG 62.748 72.222 32.15 11.44 46.54 4.00
4976 7285 3.260100 CCAAGGCCTGGGACCAGT 61.260 66.667 23.53 0.00 42.17 4.00
4977 7286 2.845345 CCAAGGCCTGGGACCAGTT 61.845 63.158 23.53 2.54 42.17 3.16
4978 7287 1.604593 CAAGGCCTGGGACCAGTTG 60.605 63.158 5.69 10.84 42.15 3.16
4979 7288 2.845345 AAGGCCTGGGACCAGTTGG 61.845 63.158 5.69 4.32 42.15 3.77
4994 7303 4.737054 CCAGTTGGTTGATTACATGAAGC 58.263 43.478 0.00 0.00 0.00 3.86
4995 7304 4.460382 CCAGTTGGTTGATTACATGAAGCT 59.540 41.667 0.00 0.00 0.00 3.74
4996 7305 5.047802 CCAGTTGGTTGATTACATGAAGCTT 60.048 40.000 0.00 0.00 0.00 3.74
4997 7306 6.150976 CCAGTTGGTTGATTACATGAAGCTTA 59.849 38.462 0.00 0.00 0.00 3.09
4998 7307 7.023575 CAGTTGGTTGATTACATGAAGCTTAC 58.976 38.462 0.00 0.00 0.00 2.34
4999 7308 6.714810 AGTTGGTTGATTACATGAAGCTTACA 59.285 34.615 0.00 0.00 0.00 2.41
5000 7309 7.394359 AGTTGGTTGATTACATGAAGCTTACAT 59.606 33.333 0.00 2.09 0.00 2.29
5001 7310 7.701539 TGGTTGATTACATGAAGCTTACATT 57.298 32.000 0.00 0.16 0.00 2.71
5002 7311 7.537715 TGGTTGATTACATGAAGCTTACATTG 58.462 34.615 0.00 0.00 0.00 2.82
5003 7312 7.392953 TGGTTGATTACATGAAGCTTACATTGA 59.607 33.333 0.00 0.00 0.00 2.57
5004 7313 7.912250 GGTTGATTACATGAAGCTTACATTGAG 59.088 37.037 0.00 0.00 0.00 3.02
5005 7314 7.019774 TGATTACATGAAGCTTACATTGAGC 57.980 36.000 0.00 0.00 40.43 4.26
5006 7315 6.598850 TGATTACATGAAGCTTACATTGAGCA 59.401 34.615 0.00 0.00 42.56 4.26
5007 7316 4.691860 ACATGAAGCTTACATTGAGCAC 57.308 40.909 0.00 0.00 42.56 4.40
5008 7317 3.441572 ACATGAAGCTTACATTGAGCACC 59.558 43.478 0.00 0.00 42.56 5.01
5009 7318 2.076100 TGAAGCTTACATTGAGCACCG 58.924 47.619 0.00 0.00 42.56 4.94
5010 7319 2.076863 GAAGCTTACATTGAGCACCGT 58.923 47.619 0.00 0.00 42.56 4.83
5011 7320 1.442769 AGCTTACATTGAGCACCGTG 58.557 50.000 0.00 0.00 42.56 4.94
5012 7321 0.447801 GCTTACATTGAGCACCGTGG 59.552 55.000 0.00 0.00 39.89 4.94
5013 7322 1.808411 CTTACATTGAGCACCGTGGT 58.192 50.000 2.07 2.07 0.00 4.16
5025 7334 2.046411 CGTGGTGCCATGGCTGTA 60.046 61.111 35.53 19.23 42.51 2.74
5026 7335 1.673993 CGTGGTGCCATGGCTGTAA 60.674 57.895 35.53 14.65 42.51 2.41
5027 7336 1.647545 CGTGGTGCCATGGCTGTAAG 61.648 60.000 35.53 20.48 42.51 2.34
5041 7350 3.395858 CTGTAAGCAGCCATTCGAAAG 57.604 47.619 0.00 0.00 35.77 2.62
5042 7351 3.002791 CTGTAAGCAGCCATTCGAAAGA 58.997 45.455 0.00 0.00 35.77 2.52
5043 7352 3.002791 TGTAAGCAGCCATTCGAAAGAG 58.997 45.455 0.00 0.00 43.69 2.85
5044 7353 2.479566 AAGCAGCCATTCGAAAGAGA 57.520 45.000 0.00 0.00 43.69 3.10
5045 7354 2.021355 AGCAGCCATTCGAAAGAGAG 57.979 50.000 0.00 0.00 43.69 3.20
5046 7355 1.552337 AGCAGCCATTCGAAAGAGAGA 59.448 47.619 0.00 0.00 43.69 3.10
5047 7356 2.027745 AGCAGCCATTCGAAAGAGAGAA 60.028 45.455 0.00 0.00 43.69 2.87
5048 7357 2.744202 GCAGCCATTCGAAAGAGAGAAA 59.256 45.455 0.00 0.00 43.69 2.52
5049 7358 3.189287 GCAGCCATTCGAAAGAGAGAAAA 59.811 43.478 0.00 0.00 43.69 2.29
5050 7359 4.671250 GCAGCCATTCGAAAGAGAGAAAAG 60.671 45.833 0.00 0.00 43.69 2.27
5051 7360 4.453819 CAGCCATTCGAAAGAGAGAAAAGT 59.546 41.667 0.00 0.00 43.69 2.66
5052 7361 5.639506 CAGCCATTCGAAAGAGAGAAAAGTA 59.360 40.000 0.00 0.00 43.69 2.24
5053 7362 5.872070 AGCCATTCGAAAGAGAGAAAAGTAG 59.128 40.000 0.00 0.00 43.69 2.57
5054 7363 5.064071 GCCATTCGAAAGAGAGAAAAGTAGG 59.936 44.000 0.00 0.00 43.69 3.18
5055 7364 5.582665 CCATTCGAAAGAGAGAAAAGTAGGG 59.417 44.000 0.00 0.00 43.69 3.53
5056 7365 4.803098 TCGAAAGAGAGAAAAGTAGGGG 57.197 45.455 0.00 0.00 34.84 4.79
5057 7366 4.413760 TCGAAAGAGAGAAAAGTAGGGGA 58.586 43.478 0.00 0.00 34.84 4.81
5058 7367 4.836736 TCGAAAGAGAGAAAAGTAGGGGAA 59.163 41.667 0.00 0.00 34.84 3.97
5059 7368 5.047235 TCGAAAGAGAGAAAAGTAGGGGAAG 60.047 44.000 0.00 0.00 34.84 3.46
5060 7369 5.492895 GAAAGAGAGAAAAGTAGGGGAAGG 58.507 45.833 0.00 0.00 0.00 3.46
5061 7370 3.455849 AGAGAGAAAAGTAGGGGAAGGG 58.544 50.000 0.00 0.00 0.00 3.95
5062 7371 2.506231 GAGAGAAAAGTAGGGGAAGGGG 59.494 54.545 0.00 0.00 0.00 4.79
5063 7372 1.564818 GAGAAAAGTAGGGGAAGGGGG 59.435 57.143 0.00 0.00 0.00 5.40
5064 7373 1.155745 AGAAAAGTAGGGGAAGGGGGA 59.844 52.381 0.00 0.00 0.00 4.81
5065 7374 1.564818 GAAAAGTAGGGGAAGGGGGAG 59.435 57.143 0.00 0.00 0.00 4.30
5066 7375 0.253677 AAAGTAGGGGAAGGGGGAGG 60.254 60.000 0.00 0.00 0.00 4.30
5067 7376 2.039724 GTAGGGGAAGGGGGAGGG 60.040 72.222 0.00 0.00 0.00 4.30
5068 7377 3.382864 TAGGGGAAGGGGGAGGGG 61.383 72.222 0.00 0.00 0.00 4.79
5071 7380 4.381121 GGGAAGGGGGAGGGGGAA 62.381 72.222 0.00 0.00 0.00 3.97
5072 7381 2.204401 GGAAGGGGGAGGGGGAAA 60.204 66.667 0.00 0.00 0.00 3.13
5073 7382 1.860214 GGAAGGGGGAGGGGGAAAA 60.860 63.158 0.00 0.00 0.00 2.29
5074 7383 1.448814 GGAAGGGGGAGGGGGAAAAA 61.449 60.000 0.00 0.00 0.00 1.94
5075 7384 0.041238 GAAGGGGGAGGGGGAAAAAG 59.959 60.000 0.00 0.00 0.00 2.27
5076 7385 0.405852 AAGGGGGAGGGGGAAAAAGA 60.406 55.000 0.00 0.00 0.00 2.52
5077 7386 0.405852 AGGGGGAGGGGGAAAAAGAA 60.406 55.000 0.00 0.00 0.00 2.52
5078 7387 0.041238 GGGGGAGGGGGAAAAAGAAG 59.959 60.000 0.00 0.00 0.00 2.85
5079 7388 1.081481 GGGGAGGGGGAAAAAGAAGA 58.919 55.000 0.00 0.00 0.00 2.87
5080 7389 1.431633 GGGGAGGGGGAAAAAGAAGAA 59.568 52.381 0.00 0.00 0.00 2.52
5081 7390 2.526432 GGGAGGGGGAAAAAGAAGAAC 58.474 52.381 0.00 0.00 0.00 3.01
5082 7391 2.158370 GGGAGGGGGAAAAAGAAGAACA 60.158 50.000 0.00 0.00 0.00 3.18
5083 7392 2.891580 GGAGGGGGAAAAAGAAGAACAC 59.108 50.000 0.00 0.00 0.00 3.32
5084 7393 3.436615 GGAGGGGGAAAAAGAAGAACACT 60.437 47.826 0.00 0.00 0.00 3.55
5085 7394 4.202535 GGAGGGGGAAAAAGAAGAACACTA 60.203 45.833 0.00 0.00 0.00 2.74
5086 7395 4.726583 AGGGGGAAAAAGAAGAACACTAC 58.273 43.478 0.00 0.00 0.00 2.73
5087 7396 4.167307 AGGGGGAAAAAGAAGAACACTACA 59.833 41.667 0.00 0.00 0.00 2.74
5088 7397 4.519350 GGGGGAAAAAGAAGAACACTACAG 59.481 45.833 0.00 0.00 0.00 2.74
5089 7398 5.374071 GGGGAAAAAGAAGAACACTACAGA 58.626 41.667 0.00 0.00 0.00 3.41
5090 7399 5.826208 GGGGAAAAAGAAGAACACTACAGAA 59.174 40.000 0.00 0.00 0.00 3.02
5091 7400 6.017026 GGGGAAAAAGAAGAACACTACAGAAG 60.017 42.308 0.00 0.00 0.00 2.85
5092 7401 6.431278 GGAAAAAGAAGAACACTACAGAAGC 58.569 40.000 0.00 0.00 0.00 3.86
5093 7402 6.261158 GGAAAAAGAAGAACACTACAGAAGCT 59.739 38.462 0.00 0.00 0.00 3.74
5094 7403 7.441458 GGAAAAAGAAGAACACTACAGAAGCTA 59.559 37.037 0.00 0.00 0.00 3.32
5095 7404 8.732746 AAAAAGAAGAACACTACAGAAGCTAA 57.267 30.769 0.00 0.00 0.00 3.09
5096 7405 8.732746 AAAAGAAGAACACTACAGAAGCTAAA 57.267 30.769 0.00 0.00 0.00 1.85
5097 7406 8.732746 AAAGAAGAACACTACAGAAGCTAAAA 57.267 30.769 0.00 0.00 0.00 1.52
5098 7407 8.732746 AAGAAGAACACTACAGAAGCTAAAAA 57.267 30.769 0.00 0.00 0.00 1.94
5121 7430 8.970859 AAAATTAGTTCAGGAGATACATCCAG 57.029 34.615 0.00 0.00 42.26 3.86
5122 7431 5.537300 TTAGTTCAGGAGATACATCCAGC 57.463 43.478 0.00 0.00 42.26 4.85
5123 7432 3.652055 AGTTCAGGAGATACATCCAGCT 58.348 45.455 0.00 0.00 42.26 4.24
5124 7433 3.640967 AGTTCAGGAGATACATCCAGCTC 59.359 47.826 0.00 0.00 42.26 4.09
5125 7434 2.234143 TCAGGAGATACATCCAGCTCG 58.766 52.381 0.00 0.00 42.26 5.03
5126 7435 1.959985 CAGGAGATACATCCAGCTCGT 59.040 52.381 0.00 0.00 42.26 4.18
5127 7436 3.149981 CAGGAGATACATCCAGCTCGTA 58.850 50.000 0.00 0.00 42.26 3.43
5128 7437 3.570125 CAGGAGATACATCCAGCTCGTAA 59.430 47.826 0.00 0.00 42.26 3.18
5129 7438 4.219507 CAGGAGATACATCCAGCTCGTAAT 59.780 45.833 0.00 0.00 42.26 1.89
5130 7439 5.416013 CAGGAGATACATCCAGCTCGTAATA 59.584 44.000 0.00 0.00 42.26 0.98
5131 7440 5.650266 AGGAGATACATCCAGCTCGTAATAG 59.350 44.000 0.00 0.00 42.26 1.73
5132 7441 5.317733 AGATACATCCAGCTCGTAATAGC 57.682 43.478 0.00 0.00 43.11 2.97
5133 7442 2.821991 ACATCCAGCTCGTAATAGCC 57.178 50.000 0.00 0.00 43.86 3.93
5134 7443 1.344763 ACATCCAGCTCGTAATAGCCC 59.655 52.381 0.00 0.00 43.86 5.19
5135 7444 0.603569 ATCCAGCTCGTAATAGCCCG 59.396 55.000 0.00 0.00 43.86 6.13
5136 7445 1.006102 CCAGCTCGTAATAGCCCGG 60.006 63.158 0.00 0.00 43.86 5.73
5137 7446 1.740285 CAGCTCGTAATAGCCCGGT 59.260 57.895 0.00 0.00 43.86 5.28
5138 7447 0.597637 CAGCTCGTAATAGCCCGGTG 60.598 60.000 0.00 0.00 43.86 4.94
5139 7448 1.954651 GCTCGTAATAGCCCGGTGC 60.955 63.158 0.00 3.33 36.45 5.01
5153 7462 4.704833 GTGCTGCCGCCTCAAGGA 62.705 66.667 0.00 0.00 37.39 3.36
5154 7463 4.399395 TGCTGCCGCCTCAAGGAG 62.399 66.667 0.00 0.00 37.39 3.69
5155 7464 4.400961 GCTGCCGCCTCAAGGAGT 62.401 66.667 0.00 0.00 37.39 3.85
5156 7465 2.348998 CTGCCGCCTCAAGGAGTT 59.651 61.111 0.00 0.00 37.39 3.01
5157 7466 2.032528 TGCCGCCTCAAGGAGTTG 59.967 61.111 0.00 0.00 37.39 3.16
5158 7467 2.032681 GCCGCCTCAAGGAGTTGT 59.967 61.111 0.00 0.00 37.39 3.32
5159 7468 2.328099 GCCGCCTCAAGGAGTTGTG 61.328 63.158 0.00 0.00 37.39 3.33
5160 7469 1.371183 CCGCCTCAAGGAGTTGTGA 59.629 57.895 0.00 0.00 37.39 3.58
5161 7470 0.951040 CCGCCTCAAGGAGTTGTGAC 60.951 60.000 0.00 0.00 37.39 3.67
5162 7471 0.249868 CGCCTCAAGGAGTTGTGACA 60.250 55.000 0.00 0.00 37.39 3.58
5163 7472 1.609061 CGCCTCAAGGAGTTGTGACAT 60.609 52.381 0.00 0.00 37.39 3.06
5164 7473 2.353704 CGCCTCAAGGAGTTGTGACATA 60.354 50.000 0.00 0.00 37.39 2.29
5165 7474 3.679917 CGCCTCAAGGAGTTGTGACATAT 60.680 47.826 0.00 0.00 37.39 1.78
5166 7475 4.441495 CGCCTCAAGGAGTTGTGACATATA 60.441 45.833 0.00 0.00 37.39 0.86
5167 7476 4.811557 GCCTCAAGGAGTTGTGACATATAC 59.188 45.833 0.00 0.00 37.39 1.47
5168 7477 5.360591 CCTCAAGGAGTTGTGACATATACC 58.639 45.833 0.00 0.00 37.39 2.73
5169 7478 5.006153 TCAAGGAGTTGTGACATATACCG 57.994 43.478 0.00 0.00 34.98 4.02
5170 7479 4.464951 TCAAGGAGTTGTGACATATACCGT 59.535 41.667 0.00 0.00 34.98 4.83
5171 7480 4.650754 AGGAGTTGTGACATATACCGTC 57.349 45.455 0.00 0.00 0.00 4.79
5172 7481 4.279145 AGGAGTTGTGACATATACCGTCT 58.721 43.478 5.88 0.00 34.37 4.18
5173 7482 4.098044 AGGAGTTGTGACATATACCGTCTG 59.902 45.833 5.88 0.00 34.37 3.51
5174 7483 4.097437 GGAGTTGTGACATATACCGTCTGA 59.903 45.833 5.88 0.00 34.37 3.27
5175 7484 5.250235 AGTTGTGACATATACCGTCTGAG 57.750 43.478 5.88 0.00 34.37 3.35
5176 7485 4.948004 AGTTGTGACATATACCGTCTGAGA 59.052 41.667 5.88 0.00 34.37 3.27
5177 7486 5.594725 AGTTGTGACATATACCGTCTGAGAT 59.405 40.000 5.88 0.00 34.37 2.75
5178 7487 6.771267 AGTTGTGACATATACCGTCTGAGATA 59.229 38.462 5.88 0.00 34.37 1.98
5179 7488 6.803154 TGTGACATATACCGTCTGAGATAG 57.197 41.667 5.88 0.00 34.37 2.08
5180 7489 5.705905 TGTGACATATACCGTCTGAGATAGG 59.294 44.000 5.55 5.55 34.37 2.57
5181 7490 5.938710 GTGACATATACCGTCTGAGATAGGA 59.061 44.000 12.76 0.00 34.37 2.94
5182 7491 5.938710 TGACATATACCGTCTGAGATAGGAC 59.061 44.000 12.76 0.00 34.37 3.85
5188 7497 0.955905 GTCTGAGATAGGACGGAGGC 59.044 60.000 0.00 0.00 0.00 4.70
5189 7498 0.178987 TCTGAGATAGGACGGAGGCC 60.179 60.000 0.00 0.00 0.00 5.19
5190 7499 0.468214 CTGAGATAGGACGGAGGCCA 60.468 60.000 5.01 0.00 0.00 5.36
5191 7500 0.188587 TGAGATAGGACGGAGGCCAT 59.811 55.000 5.01 0.00 0.00 4.40
5192 7501 0.892063 GAGATAGGACGGAGGCCATC 59.108 60.000 5.01 0.00 0.00 3.51
5193 7502 0.485099 AGATAGGACGGAGGCCATCT 59.515 55.000 5.01 0.00 0.00 2.90
5194 7503 0.892063 GATAGGACGGAGGCCATCTC 59.108 60.000 5.01 0.00 41.71 2.75
5195 7504 0.485099 ATAGGACGGAGGCCATCTCT 59.515 55.000 5.01 0.00 42.10 3.10
5196 7505 0.261991 TAGGACGGAGGCCATCTCTT 59.738 55.000 5.01 0.00 42.10 2.85
5197 7506 0.261991 AGGACGGAGGCCATCTCTTA 59.738 55.000 5.01 0.00 42.10 2.10
5198 7507 1.133009 AGGACGGAGGCCATCTCTTAT 60.133 52.381 5.01 0.00 42.10 1.73
5199 7508 1.273886 GGACGGAGGCCATCTCTTATC 59.726 57.143 5.01 0.00 42.10 1.75
5200 7509 0.962489 ACGGAGGCCATCTCTTATCG 59.038 55.000 5.01 0.46 42.10 2.92
5201 7510 0.962489 CGGAGGCCATCTCTTATCGT 59.038 55.000 5.01 0.00 42.10 3.73
5202 7511 1.341531 CGGAGGCCATCTCTTATCGTT 59.658 52.381 5.01 0.00 42.10 3.85
5203 7512 2.760374 GGAGGCCATCTCTTATCGTTG 58.240 52.381 5.01 0.00 42.10 4.10
5204 7513 2.365617 GGAGGCCATCTCTTATCGTTGA 59.634 50.000 5.01 0.00 42.10 3.18
5205 7514 3.181465 GGAGGCCATCTCTTATCGTTGAA 60.181 47.826 5.01 0.00 42.10 2.69
5206 7515 4.054671 GAGGCCATCTCTTATCGTTGAAG 58.945 47.826 5.01 0.00 39.38 3.02
5207 7516 3.706594 AGGCCATCTCTTATCGTTGAAGA 59.293 43.478 5.01 0.00 0.00 2.87
5208 7517 3.804873 GGCCATCTCTTATCGTTGAAGAC 59.195 47.826 0.00 0.00 0.00 3.01
5209 7518 4.442192 GGCCATCTCTTATCGTTGAAGACT 60.442 45.833 0.00 0.00 0.00 3.24
5210 7519 4.742659 GCCATCTCTTATCGTTGAAGACTC 59.257 45.833 0.00 0.00 0.00 3.36
5211 7520 4.973051 CCATCTCTTATCGTTGAAGACTCG 59.027 45.833 0.00 0.00 0.00 4.18
5212 7521 5.220873 CCATCTCTTATCGTTGAAGACTCGA 60.221 44.000 0.00 0.00 37.96 4.04
5213 7522 5.219226 TCTCTTATCGTTGAAGACTCGAC 57.781 43.478 0.00 0.00 36.46 4.20
5214 7523 4.936411 TCTCTTATCGTTGAAGACTCGACT 59.064 41.667 0.00 0.00 36.46 4.18
5215 7524 5.063691 TCTCTTATCGTTGAAGACTCGACTC 59.936 44.000 0.00 0.00 36.46 3.36
5216 7525 2.529136 ATCGTTGAAGACTCGACTCG 57.471 50.000 0.00 0.00 36.46 4.18
5217 7526 0.110328 TCGTTGAAGACTCGACTCGC 60.110 55.000 0.00 0.00 34.19 5.03
5218 7527 1.389204 CGTTGAAGACTCGACTCGCG 61.389 60.000 0.00 0.00 42.69 5.87
5219 7528 1.442184 TTGAAGACTCGACTCGCGC 60.442 57.895 0.00 0.00 40.61 6.86
5220 7529 2.940007 GAAGACTCGACTCGCGCG 60.940 66.667 26.76 26.76 40.61 6.86
5221 7530 3.364249 GAAGACTCGACTCGCGCGA 62.364 63.158 32.60 32.60 40.61 5.87
5222 7531 2.829577 GAAGACTCGACTCGCGCGAA 62.830 60.000 33.99 18.05 40.61 4.70
5223 7532 2.254703 AAGACTCGACTCGCGCGAAT 62.255 55.000 33.99 26.33 40.61 3.34
5224 7533 2.560151 GACTCGACTCGCGCGAATG 61.560 63.158 33.99 24.75 40.61 2.67
5225 7534 2.577112 CTCGACTCGCGCGAATGT 60.577 61.111 33.99 27.97 40.61 2.71
5226 7535 2.126618 TCGACTCGCGCGAATGTT 60.127 55.556 33.99 17.83 40.61 2.71
5227 7536 1.674611 CTCGACTCGCGCGAATGTTT 61.675 55.000 33.99 15.18 40.61 2.83
5228 7537 1.129809 CGACTCGCGCGAATGTTTT 59.870 52.632 33.99 13.31 0.00 2.43
5229 7538 1.114515 CGACTCGCGCGAATGTTTTG 61.115 55.000 33.99 21.71 0.00 2.44
5230 7539 0.110823 GACTCGCGCGAATGTTTTGT 60.111 50.000 33.99 24.90 0.00 2.83
5231 7540 0.306533 ACTCGCGCGAATGTTTTGTT 59.693 45.000 33.99 7.94 0.00 2.83
5232 7541 0.967803 CTCGCGCGAATGTTTTGTTC 59.032 50.000 33.99 0.00 0.00 3.18
5233 7542 0.384974 TCGCGCGAATGTTTTGTTCC 60.385 50.000 32.97 0.00 0.00 3.62
5234 7543 1.334288 CGCGCGAATGTTTTGTTCCC 61.334 55.000 28.94 0.00 0.00 3.97
5235 7544 0.039527 GCGCGAATGTTTTGTTCCCT 60.040 50.000 12.10 0.00 0.00 4.20
5236 7545 1.963747 CGCGAATGTTTTGTTCCCTC 58.036 50.000 0.00 0.00 0.00 4.30
5237 7546 1.724654 CGCGAATGTTTTGTTCCCTCG 60.725 52.381 0.00 0.00 0.00 4.63
5238 7547 1.963747 CGAATGTTTTGTTCCCTCGC 58.036 50.000 0.00 0.00 0.00 5.03
5239 7548 1.265635 CGAATGTTTTGTTCCCTCGCA 59.734 47.619 0.00 0.00 0.00 5.10
5240 7549 2.095263 CGAATGTTTTGTTCCCTCGCAT 60.095 45.455 0.00 0.00 0.00 4.73
5241 7550 3.244976 GAATGTTTTGTTCCCTCGCATG 58.755 45.455 0.00 0.00 0.00 4.06
5242 7551 1.686355 TGTTTTGTTCCCTCGCATGT 58.314 45.000 0.00 0.00 0.00 3.21
5243 7552 2.028130 TGTTTTGTTCCCTCGCATGTT 58.972 42.857 0.00 0.00 0.00 2.71
5244 7553 2.428890 TGTTTTGTTCCCTCGCATGTTT 59.571 40.909 0.00 0.00 0.00 2.83
5245 7554 3.049912 GTTTTGTTCCCTCGCATGTTTC 58.950 45.455 0.00 0.00 0.00 2.78
5246 7555 1.974265 TTGTTCCCTCGCATGTTTCA 58.026 45.000 0.00 0.00 0.00 2.69
5247 7556 1.522668 TGTTCCCTCGCATGTTTCAG 58.477 50.000 0.00 0.00 0.00 3.02
5248 7557 0.169009 GTTCCCTCGCATGTTTCAGC 59.831 55.000 0.00 0.00 0.00 4.26
5254 7563 2.202349 GCATGTTTCAGCGCGACC 60.202 61.111 12.10 0.00 0.00 4.79
5255 7564 2.680913 GCATGTTTCAGCGCGACCT 61.681 57.895 12.10 0.00 0.00 3.85
5256 7565 1.421485 CATGTTTCAGCGCGACCTC 59.579 57.895 12.10 0.00 0.00 3.85
5257 7566 1.005037 ATGTTTCAGCGCGACCTCA 60.005 52.632 12.10 0.40 0.00 3.86
5258 7567 0.391661 ATGTTTCAGCGCGACCTCAT 60.392 50.000 12.10 3.10 0.00 2.90
5259 7568 1.014044 TGTTTCAGCGCGACCTCATC 61.014 55.000 12.10 0.00 0.00 2.92
5260 7569 0.737715 GTTTCAGCGCGACCTCATCT 60.738 55.000 12.10 0.00 0.00 2.90
5261 7570 0.737367 TTTCAGCGCGACCTCATCTG 60.737 55.000 12.10 5.70 0.00 2.90
5262 7571 1.877576 TTCAGCGCGACCTCATCTGT 61.878 55.000 12.10 0.00 0.00 3.41
5263 7572 1.875813 CAGCGCGACCTCATCTGTC 60.876 63.158 12.10 0.00 0.00 3.51
5264 7573 2.583593 GCGCGACCTCATCTGTCC 60.584 66.667 12.10 0.00 0.00 4.02
5265 7574 2.105128 CGCGACCTCATCTGTCCC 59.895 66.667 0.00 0.00 0.00 4.46
5266 7575 2.710902 CGCGACCTCATCTGTCCCA 61.711 63.158 0.00 0.00 0.00 4.37
5267 7576 1.142748 GCGACCTCATCTGTCCCAG 59.857 63.158 0.00 0.00 0.00 4.45
5268 7577 1.323271 GCGACCTCATCTGTCCCAGA 61.323 60.000 0.00 0.00 44.99 3.86
5269 7578 1.186200 CGACCTCATCTGTCCCAGAA 58.814 55.000 0.00 0.00 44.04 3.02
5270 7579 1.550524 CGACCTCATCTGTCCCAGAAA 59.449 52.381 0.00 0.00 44.04 2.52
5271 7580 2.169352 CGACCTCATCTGTCCCAGAAAT 59.831 50.000 0.00 0.00 44.04 2.17
5272 7581 3.539604 GACCTCATCTGTCCCAGAAATG 58.460 50.000 0.00 0.00 44.04 2.32
5273 7582 2.295885 CCTCATCTGTCCCAGAAATGC 58.704 52.381 0.00 0.00 44.04 3.56
5274 7583 2.295885 CTCATCTGTCCCAGAAATGCC 58.704 52.381 0.00 0.00 44.04 4.40
5275 7584 1.918262 TCATCTGTCCCAGAAATGCCT 59.082 47.619 0.00 0.00 44.04 4.75
5276 7585 2.309755 TCATCTGTCCCAGAAATGCCTT 59.690 45.455 0.00 0.00 44.04 4.35
5277 7586 3.523157 TCATCTGTCCCAGAAATGCCTTA 59.477 43.478 0.00 0.00 44.04 2.69
5278 7587 4.018506 TCATCTGTCCCAGAAATGCCTTAA 60.019 41.667 0.00 0.00 44.04 1.85
5279 7588 3.686016 TCTGTCCCAGAAATGCCTTAAC 58.314 45.455 0.00 0.00 37.57 2.01
5280 7589 2.420022 CTGTCCCAGAAATGCCTTAACG 59.580 50.000 0.00 0.00 32.44 3.18
5281 7590 1.743394 GTCCCAGAAATGCCTTAACGG 59.257 52.381 0.00 0.00 0.00 4.44
5282 7591 1.102978 CCCAGAAATGCCTTAACGGG 58.897 55.000 0.00 0.00 0.00 5.28
5314 7623 7.967890 AAAACAAATTTCATCTTAAGCCTGG 57.032 32.000 0.00 0.00 0.00 4.45
5315 7624 6.916360 AACAAATTTCATCTTAAGCCTGGA 57.084 33.333 0.00 0.00 0.00 3.86
5316 7625 7.486407 AACAAATTTCATCTTAAGCCTGGAT 57.514 32.000 0.00 0.00 0.00 3.41
5317 7626 6.870769 ACAAATTTCATCTTAAGCCTGGATG 58.129 36.000 0.00 0.00 38.41 3.51
5318 7627 6.438425 ACAAATTTCATCTTAAGCCTGGATGT 59.562 34.615 0.00 0.00 38.28 3.06
5319 7628 7.038799 ACAAATTTCATCTTAAGCCTGGATGTT 60.039 33.333 0.00 0.00 38.28 2.71
5320 7629 7.486407 AATTTCATCTTAAGCCTGGATGTTT 57.514 32.000 0.00 0.00 38.28 2.83
5321 7630 6.515272 TTTCATCTTAAGCCTGGATGTTTC 57.485 37.500 0.00 0.00 38.28 2.78
5322 7631 5.441718 TCATCTTAAGCCTGGATGTTTCT 57.558 39.130 0.00 0.00 38.28 2.52
5323 7632 6.560003 TCATCTTAAGCCTGGATGTTTCTA 57.440 37.500 0.00 0.00 38.28 2.10
5324 7633 6.349300 TCATCTTAAGCCTGGATGTTTCTAC 58.651 40.000 0.00 0.00 38.28 2.59
5325 7634 5.755409 TCTTAAGCCTGGATGTTTCTACA 57.245 39.130 0.00 0.00 38.95 2.74
5327 7636 6.115446 TCTTAAGCCTGGATGTTTCTACATG 58.885 40.000 0.00 0.00 44.90 3.21
5336 7645 4.567959 GGATGTTTCTACATGCCAAATTGC 59.432 41.667 0.00 0.00 44.90 3.56
5337 7646 3.924144 TGTTTCTACATGCCAAATTGCC 58.076 40.909 0.00 0.00 0.00 4.52
5338 7647 2.923020 GTTTCTACATGCCAAATTGCCG 59.077 45.455 0.00 0.00 0.00 5.69
5339 7648 1.832883 TCTACATGCCAAATTGCCGT 58.167 45.000 0.00 0.00 0.00 5.68
5340 7649 1.472082 TCTACATGCCAAATTGCCGTG 59.528 47.619 0.00 0.00 0.00 4.94
5341 7650 0.108898 TACATGCCAAATTGCCGTGC 60.109 50.000 0.00 0.00 0.00 5.34
5342 7651 1.079681 CATGCCAAATTGCCGTGCT 60.080 52.632 0.00 0.00 0.00 4.40
5343 7652 1.079875 CATGCCAAATTGCCGTGCTC 61.080 55.000 0.00 0.00 0.00 4.26
5344 7653 1.534336 ATGCCAAATTGCCGTGCTCA 61.534 50.000 0.00 0.00 0.00 4.26
5345 7654 1.006337 GCCAAATTGCCGTGCTCAA 60.006 52.632 0.00 0.00 0.00 3.02
5346 7655 1.284297 GCCAAATTGCCGTGCTCAAC 61.284 55.000 0.00 0.00 0.00 3.18
5347 7656 0.667184 CCAAATTGCCGTGCTCAACC 60.667 55.000 0.00 0.00 0.00 3.77
5348 7657 0.031857 CAAATTGCCGTGCTCAACCA 59.968 50.000 0.00 0.00 0.00 3.67
5349 7658 0.749649 AAATTGCCGTGCTCAACCAA 59.250 45.000 0.00 0.00 0.00 3.67
5350 7659 0.749649 AATTGCCGTGCTCAACCAAA 59.250 45.000 0.00 0.00 0.00 3.28
5351 7660 0.749649 ATTGCCGTGCTCAACCAAAA 59.250 45.000 0.00 0.00 0.00 2.44
5352 7661 0.532573 TTGCCGTGCTCAACCAAAAA 59.467 45.000 0.00 0.00 0.00 1.94
5353 7662 0.102120 TGCCGTGCTCAACCAAAAAG 59.898 50.000 0.00 0.00 0.00 2.27
5354 7663 0.597377 GCCGTGCTCAACCAAAAAGG 60.597 55.000 0.00 0.00 45.67 3.11
5355 7664 1.028905 CCGTGCTCAACCAAAAAGGA 58.971 50.000 0.00 0.00 41.22 3.36
5356 7665 1.407258 CCGTGCTCAACCAAAAAGGAA 59.593 47.619 0.00 0.00 41.22 3.36
5357 7666 2.159170 CCGTGCTCAACCAAAAAGGAAA 60.159 45.455 0.00 0.00 41.22 3.13
5358 7667 3.516615 CGTGCTCAACCAAAAAGGAAAA 58.483 40.909 0.00 0.00 41.22 2.29
5359 7668 3.929610 CGTGCTCAACCAAAAAGGAAAAA 59.070 39.130 0.00 0.00 41.22 1.94
5360 7669 4.032786 CGTGCTCAACCAAAAAGGAAAAAG 59.967 41.667 0.00 0.00 41.22 2.27
5361 7670 5.175127 GTGCTCAACCAAAAAGGAAAAAGA 58.825 37.500 0.00 0.00 41.22 2.52
5362 7671 5.641636 GTGCTCAACCAAAAAGGAAAAAGAA 59.358 36.000 0.00 0.00 41.22 2.52
5363 7672 6.148645 GTGCTCAACCAAAAAGGAAAAAGAAA 59.851 34.615 0.00 0.00 41.22 2.52
5364 7673 6.712547 TGCTCAACCAAAAAGGAAAAAGAAAA 59.287 30.769 0.00 0.00 41.22 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.797156 CTGGCTGAGTATTTCGAATCGG 59.203 50.000 1.76 0.00 0.00 4.18
8 9 0.815615 GGGCCTGGCTGAGTATTTCG 60.816 60.000 19.68 0.00 0.00 3.46
39 40 9.062524 TGTACAACACAAGCTTAAAGTATCATT 57.937 29.630 0.00 0.00 32.95 2.57
40 41 8.615878 TGTACAACACAAGCTTAAAGTATCAT 57.384 30.769 0.00 0.00 32.95 2.45
59 60 6.839033 TGTGTTTAATGTTTCACGTGTACAA 58.161 32.000 22.94 10.71 34.08 2.41
60 61 6.418585 TGTGTTTAATGTTTCACGTGTACA 57.581 33.333 21.92 21.92 34.08 2.90
61 62 7.640630 TGAATGTGTTTAATGTTTCACGTGTAC 59.359 33.333 16.51 14.99 34.08 2.90
84 85 7.201992 GGCCATTTGTCCCATTTATTAGATGAA 60.202 37.037 0.00 0.00 0.00 2.57
89 90 5.221501 CCAGGCCATTTGTCCCATTTATTAG 60.222 44.000 5.01 0.00 0.00 1.73
101 102 1.304713 CTCAGCCCAGGCCATTTGT 60.305 57.895 5.01 0.00 43.17 2.83
114 115 0.458669 CCATGTTGCATTCCCTCAGC 59.541 55.000 0.00 0.00 0.00 4.26
115 116 0.458669 GCCATGTTGCATTCCCTCAG 59.541 55.000 0.00 0.00 0.00 3.35
122 123 2.381911 CTCTTAGGGCCATGTTGCATT 58.618 47.619 6.18 0.00 0.00 3.56
133 134 1.607628 CAATGCTCATGCTCTTAGGGC 59.392 52.381 0.00 0.00 40.48 5.19
147 148 9.490379 GCAGTTACCTATACTATTAACAATGCT 57.510 33.333 0.00 0.00 29.55 3.79
152 153 9.417561 AGTCAGCAGTTACCTATACTATTAACA 57.582 33.333 0.00 0.00 0.00 2.41
166 167 7.706607 TGACAACATCATATAGTCAGCAGTTAC 59.293 37.037 0.00 0.00 34.59 2.50
167 168 7.781056 TGACAACATCATATAGTCAGCAGTTA 58.219 34.615 0.00 0.00 34.59 2.24
176 177 8.427276 AGTGATGACATGACAACATCATATAGT 58.573 33.333 21.43 6.51 46.96 2.12
191 192 9.404348 GTATGAGTGACTATAAGTGATGACATG 57.596 37.037 0.00 0.00 0.00 3.21
306 2082 9.261180 TGCAAAAATCTAGCTATGTATGTACTC 57.739 33.333 0.00 0.00 0.00 2.59
310 2086 8.681486 TCATGCAAAAATCTAGCTATGTATGT 57.319 30.769 15.78 0.00 34.10 2.29
311 2087 8.996271 TCTCATGCAAAAATCTAGCTATGTATG 58.004 33.333 12.13 12.13 33.84 2.39
312 2088 9.217278 CTCTCATGCAAAAATCTAGCTATGTAT 57.783 33.333 0.00 0.00 0.00 2.29
315 2091 6.372185 GCTCTCATGCAAAAATCTAGCTATG 58.628 40.000 0.00 0.00 0.00 2.23
320 2096 3.949754 TGGGCTCTCATGCAAAAATCTAG 59.050 43.478 0.00 0.00 34.04 2.43
325 2101 1.999648 AGTGGGCTCTCATGCAAAAA 58.000 45.000 0.00 0.00 34.04 1.94
327 2103 1.888512 GAAAGTGGGCTCTCATGCAAA 59.111 47.619 0.00 0.00 34.04 3.68
331 2107 2.995283 TGATGAAAGTGGGCTCTCATG 58.005 47.619 0.00 0.00 0.00 3.07
343 2119 7.126726 AGAGAGACGTGAAAAATGATGAAAG 57.873 36.000 0.00 0.00 0.00 2.62
346 2122 6.459066 AGAAGAGAGACGTGAAAAATGATGA 58.541 36.000 0.00 0.00 0.00 2.92
349 2125 5.221441 TGGAGAAGAGAGACGTGAAAAATGA 60.221 40.000 0.00 0.00 0.00 2.57
357 2133 1.883275 ACTGTGGAGAAGAGAGACGTG 59.117 52.381 0.00 0.00 0.00 4.49
359 2135 1.883275 ACACTGTGGAGAAGAGAGACG 59.117 52.381 13.09 0.00 0.00 4.18
379 2155 2.294791 CCCGTTTACATGGCACTTTTGA 59.705 45.455 0.00 0.00 0.00 2.69
387 2163 0.885196 TGAAAGCCCGTTTACATGGC 59.115 50.000 0.00 0.00 45.70 4.40
388 2164 3.866883 AATGAAAGCCCGTTTACATGG 57.133 42.857 0.00 0.00 0.00 3.66
421 2202 6.099341 AGATTTCGTGTTTTGCAAAAAGACT 58.901 32.000 25.40 14.65 0.00 3.24
422 2203 6.331170 AGATTTCGTGTTTTGCAAAAAGAC 57.669 33.333 25.40 21.53 0.00 3.01
423 2204 6.183360 CCAAGATTTCGTGTTTTGCAAAAAGA 60.183 34.615 25.40 20.40 0.00 2.52
478 2262 4.141981 TGCCGGCAATCATCAATTGTTATT 60.142 37.500 30.74 1.57 45.55 1.40
479 2263 3.384146 TGCCGGCAATCATCAATTGTTAT 59.616 39.130 30.74 0.00 45.55 1.89
480 2264 2.757314 TGCCGGCAATCATCAATTGTTA 59.243 40.909 30.74 0.00 45.55 2.41
790 2579 3.447586 TCCATTTTCTACTCGTCCTCTGG 59.552 47.826 0.00 0.00 0.00 3.86
829 2618 1.074951 CTCCCCCGCTTTGTTCCTT 59.925 57.895 0.00 0.00 0.00 3.36
869 2659 9.535878 TTCCTTTCGCTTTGTTTATTTATTTGT 57.464 25.926 0.00 0.00 0.00 2.83
921 2712 2.271173 CCCCTACGCCACCTTTCC 59.729 66.667 0.00 0.00 0.00 3.13
1260 3053 5.106908 CGGAGAAAAGACCTTGAAGATGAAC 60.107 44.000 0.00 0.00 0.00 3.18
1374 3168 2.202518 GCACAATCAATGCGCGCT 60.203 55.556 33.29 15.19 32.45 5.92
1419 3229 3.129638 TGCCCACAAAAACAGTAGACAAC 59.870 43.478 0.00 0.00 0.00 3.32
1424 3234 4.111916 CAAAGTGCCCACAAAAACAGTAG 58.888 43.478 0.82 0.00 0.00 2.57
1430 3240 1.280457 ACCCAAAGTGCCCACAAAAA 58.720 45.000 0.82 0.00 0.00 1.94
1753 3564 6.932356 ACAAATATGACATAGAACAGGCAG 57.068 37.500 0.98 0.00 0.00 4.85
1837 3648 5.123027 TGGCCAAAACAAATTTCAGTGAAAC 59.877 36.000 20.26 3.99 34.23 2.78
1843 3654 6.563222 AATGATGGCCAAAACAAATTTCAG 57.437 33.333 10.96 0.00 0.00 3.02
1845 3656 9.179552 GTTAAAATGATGGCCAAAACAAATTTC 57.820 29.630 10.96 0.00 0.00 2.17
1893 3704 9.751542 ACTAACAATGATACTAAGCTATGACAC 57.248 33.333 0.00 0.00 0.00 3.67
1974 3785 6.425210 TGATCCACTCATCCTTATTACAGG 57.575 41.667 0.00 0.00 34.86 4.00
1984 3795 9.217278 GCATATCATATTATGATCCACTCATCC 57.783 37.037 19.90 0.00 46.62 3.51
1997 3808 8.206867 AGTCGGCACAATAGCATATCATATTAT 58.793 33.333 0.00 0.00 35.83 1.28
2000 3811 5.982356 AGTCGGCACAATAGCATATCATAT 58.018 37.500 0.00 0.00 35.83 1.78
2015 3826 5.391629 CCTTAAGTCCAAAATAAGTCGGCAC 60.392 44.000 0.97 0.00 0.00 5.01
2078 3889 3.398406 GTTGTAAGTTTGGCCATTTGGG 58.602 45.455 6.09 0.00 40.85 4.12
2084 3895 3.034635 ACATTGGTTGTAAGTTTGGCCA 58.965 40.909 0.00 0.00 36.57 5.36
2097 3908 2.563798 CCAGCACCGCACATTGGTT 61.564 57.895 0.00 0.00 37.72 3.67
2100 3911 4.424566 GCCCAGCACCGCACATTG 62.425 66.667 0.00 0.00 0.00 2.82
2103 3914 4.027173 TATGCCCAGCACCGCACA 62.027 61.111 0.00 0.00 43.04 4.57
2114 3925 3.492102 TCATTCTAAGCTGGTATGCCC 57.508 47.619 0.00 0.00 0.00 5.36
2117 3928 7.329499 AGCTATCATCATTCTAAGCTGGTATG 58.671 38.462 0.00 0.00 38.79 2.39
2144 3955 3.754965 TGCAGTAGCCATTCTCTTTTGT 58.245 40.909 0.00 0.00 41.13 2.83
2157 3968 2.749621 ACAACCATTAGCTTGCAGTAGC 59.250 45.455 1.95 1.95 41.53 3.58
2178 4005 3.002791 GTCGATGAAATCAAGCCAGTGA 58.997 45.455 0.00 0.00 45.97 3.41
2238 4065 5.637810 ACATGATAATATGCCTTCCGTAACG 59.362 40.000 0.00 0.00 0.00 3.18
2298 4125 9.447040 GTGGACAGTTAAAGTAAATCTCAAAAC 57.553 33.333 0.00 0.00 0.00 2.43
2315 4142 9.383519 CATATAGTATTGAACTTGTGGACAGTT 57.616 33.333 0.00 0.00 39.80 3.16
2363 4190 5.745294 CCTTTCAAATATGAATTCAGCGGTG 59.255 40.000 14.54 8.67 44.70 4.94
2449 4276 6.446781 TCGTACTCCGAGATTTACTTTGAT 57.553 37.500 1.33 0.00 41.60 2.57
2465 4292 4.715527 ATATAGGGCCGAATTCGTACTC 57.284 45.455 25.10 16.96 37.74 2.59
2656 4483 8.674607 ACAAAAGGTAACACTAAAACTTCAGAG 58.325 33.333 0.00 0.00 41.41 3.35
3236 5068 7.168219 TGTAAGGCTTCCATATATCACATTCC 58.832 38.462 1.30 0.00 0.00 3.01
3279 5111 0.539986 GACTCCCCTCGGCATAACAA 59.460 55.000 0.00 0.00 0.00 2.83
3333 5166 1.618343 GCTCCCCTTGCAGCTTTTTAA 59.382 47.619 0.00 0.00 32.48 1.52
3392 5225 2.770164 AAGTCACGGAATCCAGAAGG 57.230 50.000 0.00 0.00 0.00 3.46
3404 5237 4.034048 GTGGCATCATAACCTAAAGTCACG 59.966 45.833 0.00 0.00 0.00 4.35
3479 5313 8.135529 GTGAACAAAACTATTCCTGTAAAAGCT 58.864 33.333 0.00 0.00 0.00 3.74
3903 5743 5.428184 AGTAAAGAAGATGGGAGGAACTG 57.572 43.478 0.00 0.00 41.55 3.16
3931 5771 5.382618 ACGTAAGGGTAAGTAGACACTTG 57.617 43.478 1.33 0.00 43.05 3.16
3950 5790 3.632333 TCTCTCACATGGGAGAATACGT 58.368 45.455 27.18 0.00 42.99 3.57
4107 5947 0.944386 AATGTCGCCACTGTGAACAC 59.056 50.000 9.86 2.92 31.62 3.32
4196 6036 1.511318 TTCCACCGTTCCATGTTGCG 61.511 55.000 0.00 0.00 0.00 4.85
4250 6090 5.389520 TCAAGTCTCTTCTTCTCCTTCTGA 58.610 41.667 0.00 0.00 0.00 3.27
4321 6161 3.368571 GCTGGTGGTTGCCTGAGC 61.369 66.667 0.00 0.00 40.48 4.26
4328 6168 1.016627 CGGATGTATGCTGGTGGTTG 58.983 55.000 0.00 0.00 0.00 3.77
4341 6181 0.976641 TGACTTTGCTCCTCGGATGT 59.023 50.000 0.00 0.00 0.00 3.06
4379 6219 2.593775 CCAAACAATGTAATCTTGCGCG 59.406 45.455 0.00 0.00 0.00 6.86
4410 6259 1.850345 TCCCACAGAAGGAACAAGGTT 59.150 47.619 0.00 0.00 0.00 3.50
4427 6276 5.066505 ACATTCATCGATAGCAACTTTTCCC 59.933 40.000 0.00 0.00 0.00 3.97
4428 6277 6.124088 ACATTCATCGATAGCAACTTTTCC 57.876 37.500 0.00 0.00 0.00 3.13
4455 6304 1.969923 CCTGAAATGTCCCAAGCCAAA 59.030 47.619 0.00 0.00 0.00 3.28
4504 6353 3.438087 CACCTTTTGCTATCTCCACACAG 59.562 47.826 0.00 0.00 0.00 3.66
4513 6371 3.153919 TGAACCACCACCTTTTGCTATC 58.846 45.455 0.00 0.00 0.00 2.08
4574 6432 4.805192 GCACACTCAACACACATTGAAAAT 59.195 37.500 0.00 0.00 38.12 1.82
4615 6473 3.857549 GCCAAGGCTCTCTTTAAAAGG 57.142 47.619 3.29 0.00 38.26 3.11
4666 6834 4.476113 AGGAATTGAACCCAGATGATCAGA 59.524 41.667 0.09 0.00 0.00 3.27
4695 6863 3.691049 AAATGCGGGAATAACACATCG 57.309 42.857 0.00 0.00 0.00 3.84
4737 7046 1.486310 TGGGTGATCTCATAGTGCACC 59.514 52.381 14.63 0.00 46.28 5.01
4743 7052 9.790344 AGATTTTTATCTTGGGTGATCTCATAG 57.210 33.333 0.00 0.00 0.00 2.23
4852 7161 7.824779 GCCAGATATTAGGGTCCTTTAAGTATG 59.175 40.741 0.00 0.00 0.00 2.39
4853 7162 7.739904 AGCCAGATATTAGGGTCCTTTAAGTAT 59.260 37.037 0.00 0.00 0.00 2.12
4854 7163 7.016268 CAGCCAGATATTAGGGTCCTTTAAGTA 59.984 40.741 0.00 0.00 32.31 2.24
4855 7164 5.911766 AGCCAGATATTAGGGTCCTTTAAGT 59.088 40.000 0.00 0.00 0.00 2.24
4856 7165 6.183361 ACAGCCAGATATTAGGGTCCTTTAAG 60.183 42.308 0.00 0.00 32.31 1.85
4857 7166 5.670361 ACAGCCAGATATTAGGGTCCTTTAA 59.330 40.000 0.00 0.00 32.31 1.52
4858 7167 5.224441 ACAGCCAGATATTAGGGTCCTTTA 58.776 41.667 0.00 0.00 32.31 1.85
4859 7168 4.047883 ACAGCCAGATATTAGGGTCCTTT 58.952 43.478 0.00 0.00 32.31 3.11
4860 7169 3.648545 GACAGCCAGATATTAGGGTCCTT 59.351 47.826 0.00 0.00 32.31 3.36
4861 7170 3.243724 GACAGCCAGATATTAGGGTCCT 58.756 50.000 0.00 0.00 32.31 3.85
4862 7171 2.028930 CGACAGCCAGATATTAGGGTCC 60.029 54.545 0.00 0.00 32.31 4.46
4863 7172 2.610727 GCGACAGCCAGATATTAGGGTC 60.611 54.545 0.00 0.00 37.42 4.46
4864 7173 1.344763 GCGACAGCCAGATATTAGGGT 59.655 52.381 0.00 0.00 37.42 4.34
4865 7174 2.086054 GCGACAGCCAGATATTAGGG 57.914 55.000 0.00 0.00 37.42 3.53
4885 7194 2.513065 AAAACATTCGCGCGAGGCTG 62.513 55.000 32.74 29.18 40.44 4.85
4886 7195 1.852067 AAAAACATTCGCGCGAGGCT 61.852 50.000 32.74 18.47 40.44 4.58
4887 7196 1.442017 AAAAACATTCGCGCGAGGC 60.442 52.632 32.74 0.00 38.69 4.70
4888 7197 4.838959 AAAAACATTCGCGCGAGG 57.161 50.000 32.74 28.63 0.00 4.63
4908 7217 8.477419 ACCTCATCTACCTTTCATTTCAAAAA 57.523 30.769 0.00 0.00 0.00 1.94
4909 7218 8.477419 AACCTCATCTACCTTTCATTTCAAAA 57.523 30.769 0.00 0.00 0.00 2.44
4910 7219 7.944554 AGAACCTCATCTACCTTTCATTTCAAA 59.055 33.333 0.00 0.00 0.00 2.69
4911 7220 7.461749 AGAACCTCATCTACCTTTCATTTCAA 58.538 34.615 0.00 0.00 0.00 2.69
4912 7221 7.020827 AGAACCTCATCTACCTTTCATTTCA 57.979 36.000 0.00 0.00 0.00 2.69
4913 7222 8.426881 GTAGAACCTCATCTACCTTTCATTTC 57.573 38.462 3.62 0.00 43.88 2.17
4938 7247 9.480053 CCTTGGCATGTTTTGAAATATATAAGG 57.520 33.333 0.00 0.00 0.00 2.69
4939 7248 8.981647 GCCTTGGCATGTTTTGAAATATATAAG 58.018 33.333 6.79 0.00 0.00 1.73
4940 7249 7.930865 GGCCTTGGCATGTTTTGAAATATATAA 59.069 33.333 14.04 0.00 0.00 0.98
4941 7250 7.289782 AGGCCTTGGCATGTTTTGAAATATATA 59.710 33.333 14.04 0.00 0.00 0.86
4942 7251 6.100134 AGGCCTTGGCATGTTTTGAAATATAT 59.900 34.615 14.04 0.00 0.00 0.86
4943 7252 5.424895 AGGCCTTGGCATGTTTTGAAATATA 59.575 36.000 14.04 0.00 0.00 0.86
4944 7253 4.225717 AGGCCTTGGCATGTTTTGAAATAT 59.774 37.500 14.04 0.00 0.00 1.28
4945 7254 3.582208 AGGCCTTGGCATGTTTTGAAATA 59.418 39.130 14.04 0.00 0.00 1.40
4946 7255 2.372837 AGGCCTTGGCATGTTTTGAAAT 59.627 40.909 14.04 0.00 0.00 2.17
4947 7256 1.767681 AGGCCTTGGCATGTTTTGAAA 59.232 42.857 14.04 0.00 0.00 2.69
4948 7257 1.070445 CAGGCCTTGGCATGTTTTGAA 59.930 47.619 16.97 0.00 0.00 2.69
4949 7258 0.680618 CAGGCCTTGGCATGTTTTGA 59.319 50.000 16.97 0.00 0.00 2.69
4950 7259 0.320946 CCAGGCCTTGGCATGTTTTG 60.321 55.000 22.14 5.84 40.87 2.44
4951 7260 1.482748 CCCAGGCCTTGGCATGTTTT 61.483 55.000 22.14 0.00 46.32 2.43
4952 7261 1.914764 CCCAGGCCTTGGCATGTTT 60.915 57.895 22.14 0.00 46.32 2.83
4953 7262 2.284112 CCCAGGCCTTGGCATGTT 60.284 61.111 22.14 0.00 46.32 2.71
4954 7263 3.267233 TCCCAGGCCTTGGCATGT 61.267 61.111 18.38 0.49 46.32 3.21
4955 7264 2.757099 GTCCCAGGCCTTGGCATG 60.757 66.667 18.38 18.08 46.32 4.06
4956 7265 4.066139 GGTCCCAGGCCTTGGCAT 62.066 66.667 18.38 3.01 46.32 4.40
4958 7267 4.748144 CTGGTCCCAGGCCTTGGC 62.748 72.222 18.38 12.66 46.32 4.52
4972 7281 4.460382 AGCTTCATGTAATCAACCAACTGG 59.540 41.667 0.00 0.00 42.17 4.00
4973 7282 5.633830 AGCTTCATGTAATCAACCAACTG 57.366 39.130 0.00 0.00 0.00 3.16
4974 7283 6.714810 TGTAAGCTTCATGTAATCAACCAACT 59.285 34.615 0.00 0.00 0.00 3.16
4975 7284 6.908825 TGTAAGCTTCATGTAATCAACCAAC 58.091 36.000 0.00 0.00 0.00 3.77
4976 7285 7.701539 ATGTAAGCTTCATGTAATCAACCAA 57.298 32.000 0.00 0.00 0.00 3.67
4977 7286 7.392953 TCAATGTAAGCTTCATGTAATCAACCA 59.607 33.333 0.00 0.00 0.00 3.67
4978 7287 7.761409 TCAATGTAAGCTTCATGTAATCAACC 58.239 34.615 0.00 0.00 0.00 3.77
4979 7288 7.430502 GCTCAATGTAAGCTTCATGTAATCAAC 59.569 37.037 0.00 0.00 36.80 3.18
4980 7289 7.121020 TGCTCAATGTAAGCTTCATGTAATCAA 59.879 33.333 0.00 0.00 40.50 2.57
4981 7290 6.598850 TGCTCAATGTAAGCTTCATGTAATCA 59.401 34.615 0.00 0.87 40.50 2.57
4982 7291 6.909357 GTGCTCAATGTAAGCTTCATGTAATC 59.091 38.462 0.00 0.00 40.50 1.75
4983 7292 6.183360 GGTGCTCAATGTAAGCTTCATGTAAT 60.183 38.462 0.00 0.00 40.50 1.89
4984 7293 5.123820 GGTGCTCAATGTAAGCTTCATGTAA 59.876 40.000 0.00 0.00 40.50 2.41
4985 7294 4.635765 GGTGCTCAATGTAAGCTTCATGTA 59.364 41.667 0.00 0.00 40.50 2.29
4986 7295 3.441572 GGTGCTCAATGTAAGCTTCATGT 59.558 43.478 0.00 0.00 40.50 3.21
4987 7296 3.486375 CGGTGCTCAATGTAAGCTTCATG 60.486 47.826 0.00 0.00 40.50 3.07
4988 7297 2.679837 CGGTGCTCAATGTAAGCTTCAT 59.320 45.455 0.00 3.80 40.50 2.57
4989 7298 2.076100 CGGTGCTCAATGTAAGCTTCA 58.924 47.619 0.00 1.13 40.50 3.02
4990 7299 2.076863 ACGGTGCTCAATGTAAGCTTC 58.923 47.619 0.00 0.00 40.50 3.86
4991 7300 1.806542 CACGGTGCTCAATGTAAGCTT 59.193 47.619 3.48 3.48 40.50 3.74
4992 7301 1.442769 CACGGTGCTCAATGTAAGCT 58.557 50.000 0.00 0.00 40.50 3.74
4993 7302 0.447801 CCACGGTGCTCAATGTAAGC 59.552 55.000 1.68 0.00 40.26 3.09
4994 7303 1.464608 CACCACGGTGCTCAATGTAAG 59.535 52.381 2.68 0.00 39.39 2.34
4995 7304 1.518325 CACCACGGTGCTCAATGTAA 58.482 50.000 2.68 0.00 39.39 2.41
4996 7305 3.225272 CACCACGGTGCTCAATGTA 57.775 52.632 2.68 0.00 39.39 2.29
4997 7306 4.063529 CACCACGGTGCTCAATGT 57.936 55.556 2.68 0.00 39.39 2.71
5007 7316 3.620419 TACAGCCATGGCACCACGG 62.620 63.158 37.18 20.38 44.88 4.94
5008 7317 1.647545 CTTACAGCCATGGCACCACG 61.648 60.000 37.18 21.31 44.88 4.94
5009 7318 1.937546 GCTTACAGCCATGGCACCAC 61.938 60.000 37.18 17.81 44.88 4.16
5010 7319 1.678635 GCTTACAGCCATGGCACCA 60.679 57.895 37.18 18.95 44.88 4.17
5011 7320 1.660560 CTGCTTACAGCCATGGCACC 61.661 60.000 37.18 18.15 41.51 5.01
5012 7321 1.805254 CTGCTTACAGCCATGGCAC 59.195 57.895 37.18 18.95 41.51 5.01
5013 7322 4.324471 CTGCTTACAGCCATGGCA 57.676 55.556 37.18 15.78 41.51 4.92
5022 7331 3.002791 CTCTTTCGAATGGCTGCTTACA 58.997 45.455 10.78 0.00 0.00 2.41
5023 7332 3.262420 TCTCTTTCGAATGGCTGCTTAC 58.738 45.455 10.78 0.00 0.00 2.34
5024 7333 3.195610 TCTCTCTTTCGAATGGCTGCTTA 59.804 43.478 10.78 0.00 0.00 3.09
5025 7334 2.027745 TCTCTCTTTCGAATGGCTGCTT 60.028 45.455 10.78 0.00 0.00 3.91
5026 7335 1.552337 TCTCTCTTTCGAATGGCTGCT 59.448 47.619 10.78 0.00 0.00 4.24
5027 7336 2.015736 TCTCTCTTTCGAATGGCTGC 57.984 50.000 10.78 0.00 0.00 5.25
5028 7337 4.453819 ACTTTTCTCTCTTTCGAATGGCTG 59.546 41.667 10.78 3.12 0.00 4.85
5029 7338 4.646572 ACTTTTCTCTCTTTCGAATGGCT 58.353 39.130 10.78 0.00 0.00 4.75
5030 7339 5.064071 CCTACTTTTCTCTCTTTCGAATGGC 59.936 44.000 10.78 0.00 0.00 4.40
5031 7340 5.582665 CCCTACTTTTCTCTCTTTCGAATGG 59.417 44.000 10.78 2.18 0.00 3.16
5032 7341 5.582665 CCCCTACTTTTCTCTCTTTCGAATG 59.417 44.000 0.00 0.78 0.00 2.67
5033 7342 5.484290 TCCCCTACTTTTCTCTCTTTCGAAT 59.516 40.000 0.00 0.00 0.00 3.34
5034 7343 4.836736 TCCCCTACTTTTCTCTCTTTCGAA 59.163 41.667 0.00 0.00 0.00 3.71
5035 7344 4.413760 TCCCCTACTTTTCTCTCTTTCGA 58.586 43.478 0.00 0.00 0.00 3.71
5036 7345 4.803098 TCCCCTACTTTTCTCTCTTTCG 57.197 45.455 0.00 0.00 0.00 3.46
5037 7346 5.492895 CCTTCCCCTACTTTTCTCTCTTTC 58.507 45.833 0.00 0.00 0.00 2.62
5038 7347 4.289934 CCCTTCCCCTACTTTTCTCTCTTT 59.710 45.833 0.00 0.00 0.00 2.52
5039 7348 3.847184 CCCTTCCCCTACTTTTCTCTCTT 59.153 47.826 0.00 0.00 0.00 2.85
5040 7349 3.455849 CCCTTCCCCTACTTTTCTCTCT 58.544 50.000 0.00 0.00 0.00 3.10
5041 7350 2.506231 CCCCTTCCCCTACTTTTCTCTC 59.494 54.545 0.00 0.00 0.00 3.20
5042 7351 2.563406 CCCCTTCCCCTACTTTTCTCT 58.437 52.381 0.00 0.00 0.00 3.10
5043 7352 1.564818 CCCCCTTCCCCTACTTTTCTC 59.435 57.143 0.00 0.00 0.00 2.87
5044 7353 1.155745 TCCCCCTTCCCCTACTTTTCT 59.844 52.381 0.00 0.00 0.00 2.52
5045 7354 1.564818 CTCCCCCTTCCCCTACTTTTC 59.435 57.143 0.00 0.00 0.00 2.29
5046 7355 1.682478 CTCCCCCTTCCCCTACTTTT 58.318 55.000 0.00 0.00 0.00 2.27
5047 7356 0.253677 CCTCCCCCTTCCCCTACTTT 60.254 60.000 0.00 0.00 0.00 2.66
5048 7357 1.400711 CCTCCCCCTTCCCCTACTT 59.599 63.158 0.00 0.00 0.00 2.24
5049 7358 2.658404 CCCTCCCCCTTCCCCTACT 61.658 68.421 0.00 0.00 0.00 2.57
5050 7359 2.039724 CCCTCCCCCTTCCCCTAC 60.040 72.222 0.00 0.00 0.00 3.18
5051 7360 3.382864 CCCCTCCCCCTTCCCCTA 61.383 72.222 0.00 0.00 0.00 3.53
5054 7363 3.922305 TTTCCCCCTCCCCCTTCCC 62.922 68.421 0.00 0.00 0.00 3.97
5055 7364 1.448814 TTTTTCCCCCTCCCCCTTCC 61.449 60.000 0.00 0.00 0.00 3.46
5056 7365 0.041238 CTTTTTCCCCCTCCCCCTTC 59.959 60.000 0.00 0.00 0.00 3.46
5057 7366 0.405852 TCTTTTTCCCCCTCCCCCTT 60.406 55.000 0.00 0.00 0.00 3.95
5058 7367 0.405852 TTCTTTTTCCCCCTCCCCCT 60.406 55.000 0.00 0.00 0.00 4.79
5059 7368 0.041238 CTTCTTTTTCCCCCTCCCCC 59.959 60.000 0.00 0.00 0.00 5.40
5060 7369 1.081481 TCTTCTTTTTCCCCCTCCCC 58.919 55.000 0.00 0.00 0.00 4.81
5061 7370 2.158370 TGTTCTTCTTTTTCCCCCTCCC 60.158 50.000 0.00 0.00 0.00 4.30
5062 7371 2.891580 GTGTTCTTCTTTTTCCCCCTCC 59.108 50.000 0.00 0.00 0.00 4.30
5063 7372 3.833732 AGTGTTCTTCTTTTTCCCCCTC 58.166 45.455 0.00 0.00 0.00 4.30
5064 7373 3.973472 AGTGTTCTTCTTTTTCCCCCT 57.027 42.857 0.00 0.00 0.00 4.79
5065 7374 4.466827 TGTAGTGTTCTTCTTTTTCCCCC 58.533 43.478 0.00 0.00 0.00 5.40
5066 7375 5.374071 TCTGTAGTGTTCTTCTTTTTCCCC 58.626 41.667 0.00 0.00 0.00 4.81
5067 7376 6.513556 GCTTCTGTAGTGTTCTTCTTTTTCCC 60.514 42.308 0.00 0.00 0.00 3.97
5068 7377 6.261158 AGCTTCTGTAGTGTTCTTCTTTTTCC 59.739 38.462 0.00 0.00 0.00 3.13
5069 7378 7.252965 AGCTTCTGTAGTGTTCTTCTTTTTC 57.747 36.000 0.00 0.00 0.00 2.29
5070 7379 8.732746 TTAGCTTCTGTAGTGTTCTTCTTTTT 57.267 30.769 0.00 0.00 0.00 1.94
5071 7380 8.732746 TTTAGCTTCTGTAGTGTTCTTCTTTT 57.267 30.769 0.00 0.00 0.00 2.27
5072 7381 8.732746 TTTTAGCTTCTGTAGTGTTCTTCTTT 57.267 30.769 0.00 0.00 0.00 2.52
5073 7382 8.732746 TTTTTAGCTTCTGTAGTGTTCTTCTT 57.267 30.769 0.00 0.00 0.00 2.52
5095 7404 9.401058 CTGGATGTATCTCCTGAACTAATTTTT 57.599 33.333 0.00 0.00 36.61 1.94
5096 7405 7.500559 GCTGGATGTATCTCCTGAACTAATTTT 59.499 37.037 1.67 0.00 36.61 1.82
5097 7406 6.995091 GCTGGATGTATCTCCTGAACTAATTT 59.005 38.462 1.67 0.00 36.61 1.82
5098 7407 6.328672 AGCTGGATGTATCTCCTGAACTAATT 59.671 38.462 0.00 0.00 36.61 1.40
5099 7408 5.843421 AGCTGGATGTATCTCCTGAACTAAT 59.157 40.000 0.00 0.00 36.61 1.73
5100 7409 5.211973 AGCTGGATGTATCTCCTGAACTAA 58.788 41.667 0.00 0.00 36.61 2.24
5101 7410 4.809193 AGCTGGATGTATCTCCTGAACTA 58.191 43.478 0.00 0.00 36.61 2.24
5102 7411 3.640967 GAGCTGGATGTATCTCCTGAACT 59.359 47.826 0.00 0.00 36.61 3.01
5103 7412 3.551863 CGAGCTGGATGTATCTCCTGAAC 60.552 52.174 0.00 0.00 36.61 3.18
5104 7413 2.625314 CGAGCTGGATGTATCTCCTGAA 59.375 50.000 0.00 0.00 36.61 3.02
5105 7414 2.234143 CGAGCTGGATGTATCTCCTGA 58.766 52.381 0.00 0.00 36.61 3.86
5106 7415 1.959985 ACGAGCTGGATGTATCTCCTG 59.040 52.381 1.44 0.00 36.20 3.86
5107 7416 2.373335 ACGAGCTGGATGTATCTCCT 57.627 50.000 1.44 0.00 36.20 3.69
5108 7417 4.792521 ATTACGAGCTGGATGTATCTCC 57.207 45.455 1.44 0.00 35.74 3.71
5109 7418 5.336744 GCTATTACGAGCTGGATGTATCTC 58.663 45.833 1.44 0.00 39.50 2.75
5110 7419 4.158764 GGCTATTACGAGCTGGATGTATCT 59.841 45.833 1.44 0.00 42.43 1.98
5111 7420 4.425520 GGCTATTACGAGCTGGATGTATC 58.574 47.826 1.44 0.00 42.43 2.24
5112 7421 3.195825 GGGCTATTACGAGCTGGATGTAT 59.804 47.826 1.44 0.00 42.43 2.29
5113 7422 2.561419 GGGCTATTACGAGCTGGATGTA 59.439 50.000 1.44 0.00 42.43 2.29
5114 7423 1.344763 GGGCTATTACGAGCTGGATGT 59.655 52.381 1.44 0.00 42.43 3.06
5115 7424 1.670087 CGGGCTATTACGAGCTGGATG 60.670 57.143 1.44 0.00 42.43 3.51
5116 7425 0.603569 CGGGCTATTACGAGCTGGAT 59.396 55.000 1.44 0.00 42.43 3.41
5117 7426 1.461091 CCGGGCTATTACGAGCTGGA 61.461 60.000 1.44 0.00 42.43 3.86
5118 7427 1.006102 CCGGGCTATTACGAGCTGG 60.006 63.158 0.00 0.00 42.43 4.85
5119 7428 0.597637 CACCGGGCTATTACGAGCTG 60.598 60.000 6.32 0.00 42.43 4.24
5120 7429 1.740285 CACCGGGCTATTACGAGCT 59.260 57.895 6.32 0.00 42.43 4.09
5121 7430 1.954651 GCACCGGGCTATTACGAGC 60.955 63.158 6.32 0.00 42.05 5.03
5122 7431 4.338327 GCACCGGGCTATTACGAG 57.662 61.111 6.32 0.00 40.25 4.18
5138 7447 3.909086 AACTCCTTGAGGCGGCAGC 62.909 63.158 13.08 0.00 44.18 5.25
5139 7448 2.037136 CAACTCCTTGAGGCGGCAG 61.037 63.158 13.08 0.11 33.35 4.85
5140 7449 2.032528 CAACTCCTTGAGGCGGCA 59.967 61.111 13.08 0.00 33.35 5.69
5141 7450 2.032681 ACAACTCCTTGAGGCGGC 59.967 61.111 0.00 0.00 33.35 6.53
5142 7451 0.951040 GTCACAACTCCTTGAGGCGG 60.951 60.000 0.00 0.00 33.35 6.13
5143 7452 0.249868 TGTCACAACTCCTTGAGGCG 60.250 55.000 0.00 0.00 33.35 5.52
5144 7453 2.191128 ATGTCACAACTCCTTGAGGC 57.809 50.000 0.00 0.00 33.35 4.70
5145 7454 5.360591 GGTATATGTCACAACTCCTTGAGG 58.639 45.833 0.00 0.00 33.35 3.86
5146 7455 5.043903 CGGTATATGTCACAACTCCTTGAG 58.956 45.833 0.00 0.00 35.52 3.02
5147 7456 4.464951 ACGGTATATGTCACAACTCCTTGA 59.535 41.667 0.00 0.00 0.00 3.02
5148 7457 4.755411 ACGGTATATGTCACAACTCCTTG 58.245 43.478 0.00 0.00 0.00 3.61
5149 7458 4.710375 AGACGGTATATGTCACAACTCCTT 59.290 41.667 9.81 0.00 38.83 3.36
5150 7459 4.098044 CAGACGGTATATGTCACAACTCCT 59.902 45.833 9.81 0.00 38.83 3.69
5151 7460 4.097437 TCAGACGGTATATGTCACAACTCC 59.903 45.833 9.81 0.00 38.83 3.85
5152 7461 5.066117 TCTCAGACGGTATATGTCACAACTC 59.934 44.000 9.81 0.00 38.83 3.01
5153 7462 4.948004 TCTCAGACGGTATATGTCACAACT 59.052 41.667 9.81 0.00 38.83 3.16
5154 7463 5.244785 TCTCAGACGGTATATGTCACAAC 57.755 43.478 9.81 0.00 38.83 3.32
5155 7464 6.206829 CCTATCTCAGACGGTATATGTCACAA 59.793 42.308 9.81 0.00 38.83 3.33
5156 7465 5.705905 CCTATCTCAGACGGTATATGTCACA 59.294 44.000 9.81 0.00 38.83 3.58
5157 7466 5.938710 TCCTATCTCAGACGGTATATGTCAC 59.061 44.000 9.81 0.00 38.83 3.67
5158 7467 5.938710 GTCCTATCTCAGACGGTATATGTCA 59.061 44.000 9.81 0.00 38.83 3.58
5159 7468 6.425577 GTCCTATCTCAGACGGTATATGTC 57.574 45.833 0.00 1.00 36.60 3.06
5169 7478 0.955905 GCCTCCGTCCTATCTCAGAC 59.044 60.000 0.00 0.00 0.00 3.51
5170 7479 0.178987 GGCCTCCGTCCTATCTCAGA 60.179 60.000 0.00 0.00 0.00 3.27
5171 7480 0.468214 TGGCCTCCGTCCTATCTCAG 60.468 60.000 3.32 0.00 0.00 3.35
5172 7481 0.188587 ATGGCCTCCGTCCTATCTCA 59.811 55.000 3.32 0.00 0.00 3.27
5173 7482 0.892063 GATGGCCTCCGTCCTATCTC 59.108 60.000 3.32 0.00 33.70 2.75
5174 7483 0.485099 AGATGGCCTCCGTCCTATCT 59.515 55.000 3.32 0.00 40.21 1.98
5175 7484 0.892063 GAGATGGCCTCCGTCCTATC 59.108 60.000 3.32 0.00 40.21 2.08
5176 7485 0.485099 AGAGATGGCCTCCGTCCTAT 59.515 55.000 3.32 0.00 42.97 2.57
5177 7486 0.261991 AAGAGATGGCCTCCGTCCTA 59.738 55.000 3.32 0.00 42.97 2.94
5178 7487 0.261991 TAAGAGATGGCCTCCGTCCT 59.738 55.000 3.32 0.00 42.97 3.85
5179 7488 1.273886 GATAAGAGATGGCCTCCGTCC 59.726 57.143 3.32 0.00 42.97 4.79
5180 7489 1.068194 CGATAAGAGATGGCCTCCGTC 60.068 57.143 3.32 0.00 42.97 4.79
5181 7490 0.962489 CGATAAGAGATGGCCTCCGT 59.038 55.000 3.32 0.00 42.97 4.69
5182 7491 0.962489 ACGATAAGAGATGGCCTCCG 59.038 55.000 3.32 0.00 42.97 4.63
5183 7492 2.365617 TCAACGATAAGAGATGGCCTCC 59.634 50.000 3.32 0.00 42.97 4.30
5184 7493 3.735237 TCAACGATAAGAGATGGCCTC 57.265 47.619 3.32 0.00 42.28 4.70
5185 7494 3.706594 TCTTCAACGATAAGAGATGGCCT 59.293 43.478 3.32 0.00 0.00 5.19
5186 7495 3.804873 GTCTTCAACGATAAGAGATGGCC 59.195 47.826 0.00 0.00 33.75 5.36
5187 7496 4.688021 AGTCTTCAACGATAAGAGATGGC 58.312 43.478 0.00 0.00 33.75 4.40
5188 7497 4.973051 CGAGTCTTCAACGATAAGAGATGG 59.027 45.833 0.00 0.00 33.75 3.51
5189 7498 5.679355 GTCGAGTCTTCAACGATAAGAGATG 59.321 44.000 0.00 0.00 38.27 2.90
5190 7499 5.587043 AGTCGAGTCTTCAACGATAAGAGAT 59.413 40.000 0.00 0.00 38.27 2.75
5191 7500 4.936411 AGTCGAGTCTTCAACGATAAGAGA 59.064 41.667 0.00 0.00 38.27 3.10
5192 7501 5.224562 AGTCGAGTCTTCAACGATAAGAG 57.775 43.478 0.00 0.00 38.27 2.85
5193 7502 4.201695 CGAGTCGAGTCTTCAACGATAAGA 60.202 45.833 17.82 0.00 38.27 2.10
5194 7503 4.023128 CGAGTCGAGTCTTCAACGATAAG 58.977 47.826 17.82 0.00 38.27 1.73
5195 7504 3.727079 GCGAGTCGAGTCTTCAACGATAA 60.727 47.826 18.61 0.00 38.27 1.75
5196 7505 2.222976 GCGAGTCGAGTCTTCAACGATA 60.223 50.000 18.61 0.00 38.27 2.92
5197 7506 1.466024 GCGAGTCGAGTCTTCAACGAT 60.466 52.381 18.61 0.00 38.27 3.73
5198 7507 0.110328 GCGAGTCGAGTCTTCAACGA 60.110 55.000 18.61 0.00 0.00 3.85
5199 7508 1.389204 CGCGAGTCGAGTCTTCAACG 61.389 60.000 18.61 9.67 41.67 4.10
5200 7509 1.666446 GCGCGAGTCGAGTCTTCAAC 61.666 60.000 18.61 0.00 41.67 3.18
5201 7510 1.442184 GCGCGAGTCGAGTCTTCAA 60.442 57.895 18.61 0.00 41.67 2.69
5202 7511 2.176055 GCGCGAGTCGAGTCTTCA 59.824 61.111 18.61 0.00 41.67 3.02
5203 7512 2.829577 TTCGCGCGAGTCGAGTCTTC 62.830 60.000 32.74 8.66 41.67 2.87
5204 7513 2.254703 ATTCGCGCGAGTCGAGTCTT 62.255 55.000 32.74 7.45 41.67 3.01
5205 7514 2.751913 ATTCGCGCGAGTCGAGTCT 61.752 57.895 32.74 8.32 41.67 3.24
5206 7515 2.277373 ATTCGCGCGAGTCGAGTC 60.277 61.111 32.74 10.37 41.67 3.36
5207 7516 2.577112 CATTCGCGCGAGTCGAGT 60.577 61.111 32.74 12.73 41.67 4.18
5208 7517 1.674611 AAACATTCGCGCGAGTCGAG 61.675 55.000 32.74 19.91 41.67 4.04
5209 7518 1.279527 AAAACATTCGCGCGAGTCGA 61.280 50.000 32.74 19.02 41.67 4.20
5210 7519 1.114515 CAAAACATTCGCGCGAGTCG 61.115 55.000 32.74 25.12 42.12 4.18
5211 7520 0.110823 ACAAAACATTCGCGCGAGTC 60.111 50.000 32.74 0.00 0.00 3.36
5212 7521 0.306533 AACAAAACATTCGCGCGAGT 59.693 45.000 32.74 27.91 0.00 4.18
5213 7522 0.967803 GAACAAAACATTCGCGCGAG 59.032 50.000 32.74 24.15 0.00 5.03
5214 7523 0.384974 GGAACAAAACATTCGCGCGA 60.385 50.000 31.40 31.40 0.00 5.87
5215 7524 1.334288 GGGAACAAAACATTCGCGCG 61.334 55.000 26.76 26.76 30.53 6.86
5216 7525 0.039527 AGGGAACAAAACATTCGCGC 60.040 50.000 0.00 0.00 42.25 6.86
5217 7526 1.724654 CGAGGGAACAAAACATTCGCG 60.725 52.381 0.00 0.00 42.25 5.87
5218 7527 1.963747 CGAGGGAACAAAACATTCGC 58.036 50.000 0.00 0.00 38.84 4.70
5219 7528 1.265635 TGCGAGGGAACAAAACATTCG 59.734 47.619 0.00 0.00 0.00 3.34
5220 7529 3.244976 CATGCGAGGGAACAAAACATTC 58.755 45.455 0.00 0.00 0.00 2.67
5221 7530 2.627699 ACATGCGAGGGAACAAAACATT 59.372 40.909 0.00 0.00 0.00 2.71
5222 7531 2.238521 ACATGCGAGGGAACAAAACAT 58.761 42.857 0.00 0.00 0.00 2.71
5223 7532 1.686355 ACATGCGAGGGAACAAAACA 58.314 45.000 0.00 0.00 0.00 2.83
5224 7533 2.793278 AACATGCGAGGGAACAAAAC 57.207 45.000 0.00 0.00 0.00 2.43
5225 7534 2.690497 TGAAACATGCGAGGGAACAAAA 59.310 40.909 0.00 0.00 0.00 2.44
5226 7535 2.293122 CTGAAACATGCGAGGGAACAAA 59.707 45.455 0.00 0.00 0.00 2.83
5227 7536 1.879380 CTGAAACATGCGAGGGAACAA 59.121 47.619 0.00 0.00 0.00 2.83
5228 7537 1.522668 CTGAAACATGCGAGGGAACA 58.477 50.000 0.00 0.00 0.00 3.18
5229 7538 0.169009 GCTGAAACATGCGAGGGAAC 59.831 55.000 0.00 0.00 0.00 3.62
5230 7539 2.555123 GCTGAAACATGCGAGGGAA 58.445 52.632 0.00 0.00 0.00 3.97
5231 7540 4.301505 GCTGAAACATGCGAGGGA 57.698 55.556 0.00 0.00 0.00 4.20
5237 7546 2.202349 GGTCGCGCTGAAACATGC 60.202 61.111 5.56 0.00 0.00 4.06
5238 7547 1.291184 TGAGGTCGCGCTGAAACATG 61.291 55.000 5.56 0.00 0.00 3.21
5239 7548 0.391661 ATGAGGTCGCGCTGAAACAT 60.392 50.000 5.56 8.19 0.00 2.71
5240 7549 1.005037 ATGAGGTCGCGCTGAAACA 60.005 52.632 5.56 6.33 0.00 2.83
5241 7550 0.737715 AGATGAGGTCGCGCTGAAAC 60.738 55.000 5.56 0.00 0.00 2.78
5242 7551 0.737367 CAGATGAGGTCGCGCTGAAA 60.737 55.000 5.56 0.00 0.00 2.69
5243 7552 1.153765 CAGATGAGGTCGCGCTGAA 60.154 57.895 5.56 0.00 0.00 3.02
5244 7553 2.271607 GACAGATGAGGTCGCGCTGA 62.272 60.000 13.39 1.08 0.00 4.26
5245 7554 1.875813 GACAGATGAGGTCGCGCTG 60.876 63.158 5.56 3.32 0.00 5.18
5246 7555 2.492090 GACAGATGAGGTCGCGCT 59.508 61.111 5.56 0.00 0.00 5.92
5247 7556 2.583593 GGACAGATGAGGTCGCGC 60.584 66.667 0.00 0.00 36.12 6.86
5248 7557 2.105128 GGGACAGATGAGGTCGCG 59.895 66.667 0.00 0.00 38.24 5.87
5249 7558 3.298958 TGGGACAGATGAGGTCGC 58.701 61.111 0.00 0.00 45.35 5.19
5260 7569 2.432444 CGTTAAGGCATTTCTGGGACA 58.568 47.619 0.00 0.00 0.00 4.02
5261 7570 1.743394 CCGTTAAGGCATTTCTGGGAC 59.257 52.381 0.00 0.00 0.00 4.46
5262 7571 1.340600 CCCGTTAAGGCATTTCTGGGA 60.341 52.381 8.11 0.00 37.61 4.37
5263 7572 1.102978 CCCGTTAAGGCATTTCTGGG 58.897 55.000 0.00 0.00 39.21 4.45
5289 7598 8.210265 TCCAGGCTTAAGATGAAATTTGTTTTT 58.790 29.630 6.67 0.00 0.00 1.94
5290 7599 7.734942 TCCAGGCTTAAGATGAAATTTGTTTT 58.265 30.769 6.67 0.00 0.00 2.43
5291 7600 7.301868 TCCAGGCTTAAGATGAAATTTGTTT 57.698 32.000 6.67 0.00 0.00 2.83
5292 7601 6.916360 TCCAGGCTTAAGATGAAATTTGTT 57.084 33.333 6.67 0.00 0.00 2.83
5293 7602 6.438425 ACATCCAGGCTTAAGATGAAATTTGT 59.562 34.615 20.15 0.00 39.84 2.83
5294 7603 6.870769 ACATCCAGGCTTAAGATGAAATTTG 58.129 36.000 20.15 0.00 39.84 2.32
5295 7604 7.486407 AACATCCAGGCTTAAGATGAAATTT 57.514 32.000 20.15 0.00 39.84 1.82
5296 7605 7.398332 AGAAACATCCAGGCTTAAGATGAAATT 59.602 33.333 20.15 13.42 39.84 1.82
5297 7606 6.894103 AGAAACATCCAGGCTTAAGATGAAAT 59.106 34.615 20.15 9.37 39.84 2.17
5298 7607 6.248433 AGAAACATCCAGGCTTAAGATGAAA 58.752 36.000 20.15 0.00 39.84 2.69
5299 7608 5.819991 AGAAACATCCAGGCTTAAGATGAA 58.180 37.500 20.15 0.00 39.84 2.57
5300 7609 5.441718 AGAAACATCCAGGCTTAAGATGA 57.558 39.130 20.15 0.00 39.84 2.92
5301 7610 6.115446 TGTAGAAACATCCAGGCTTAAGATG 58.885 40.000 6.67 14.34 42.49 2.90
5302 7611 6.313519 TGTAGAAACATCCAGGCTTAAGAT 57.686 37.500 6.67 0.00 0.00 2.40
5303 7612 5.755409 TGTAGAAACATCCAGGCTTAAGA 57.245 39.130 6.67 0.00 0.00 2.10
5304 7613 5.220931 GCATGTAGAAACATCCAGGCTTAAG 60.221 44.000 0.00 0.00 44.70 1.85
5305 7614 4.640201 GCATGTAGAAACATCCAGGCTTAA 59.360 41.667 0.00 0.00 44.70 1.85
5306 7615 4.199310 GCATGTAGAAACATCCAGGCTTA 58.801 43.478 0.00 0.00 44.70 3.09
5307 7616 3.019564 GCATGTAGAAACATCCAGGCTT 58.980 45.455 0.00 0.00 44.70 4.35
5308 7617 2.648059 GCATGTAGAAACATCCAGGCT 58.352 47.619 0.00 0.00 44.70 4.58
5309 7618 1.678101 GGCATGTAGAAACATCCAGGC 59.322 52.381 0.00 0.00 44.70 4.85
5310 7619 3.003394 TGGCATGTAGAAACATCCAGG 57.997 47.619 0.00 0.00 44.70 4.45
5311 7620 5.587388 ATTTGGCATGTAGAAACATCCAG 57.413 39.130 0.00 0.00 44.70 3.86
5312 7621 5.722263 CAATTTGGCATGTAGAAACATCCA 58.278 37.500 0.00 5.92 44.70 3.41
5313 7622 4.567959 GCAATTTGGCATGTAGAAACATCC 59.432 41.667 0.00 0.00 44.70 3.51
5314 7623 4.567959 GGCAATTTGGCATGTAGAAACATC 59.432 41.667 17.26 0.00 44.70 3.06
5316 7625 3.613671 CGGCAATTTGGCATGTAGAAACA 60.614 43.478 21.18 0.00 43.94 2.83
5317 7626 2.923020 CGGCAATTTGGCATGTAGAAAC 59.077 45.455 21.18 0.00 43.94 2.78
5318 7627 2.560542 ACGGCAATTTGGCATGTAGAAA 59.439 40.909 21.18 0.00 43.94 2.52
5319 7628 2.094803 CACGGCAATTTGGCATGTAGAA 60.095 45.455 21.18 0.00 43.94 2.10
5320 7629 1.472082 CACGGCAATTTGGCATGTAGA 59.528 47.619 21.18 0.00 43.94 2.59
5321 7630 1.912001 CACGGCAATTTGGCATGTAG 58.088 50.000 21.18 8.22 43.94 2.74
5322 7631 0.108898 GCACGGCAATTTGGCATGTA 60.109 50.000 21.18 0.00 43.94 2.29
5323 7632 1.374505 GCACGGCAATTTGGCATGT 60.375 52.632 21.18 10.13 43.94 3.21
5324 7633 1.079681 AGCACGGCAATTTGGCATG 60.080 52.632 21.18 17.65 43.94 4.06
5325 7634 1.216178 GAGCACGGCAATTTGGCAT 59.784 52.632 21.18 4.64 43.94 4.40
5326 7635 1.742324 TTGAGCACGGCAATTTGGCA 61.742 50.000 21.18 0.00 43.94 4.92
5327 7636 1.006337 TTGAGCACGGCAATTTGGC 60.006 52.632 12.66 12.66 39.85 4.52
5328 7637 0.667184 GGTTGAGCACGGCAATTTGG 60.667 55.000 0.00 0.00 0.00 3.28
5329 7638 0.031857 TGGTTGAGCACGGCAATTTG 59.968 50.000 0.00 0.00 0.00 2.32
5330 7639 0.749649 TTGGTTGAGCACGGCAATTT 59.250 45.000 0.00 0.00 0.00 1.82
5331 7640 0.749649 TTTGGTTGAGCACGGCAATT 59.250 45.000 0.00 0.00 0.00 2.32
5332 7641 0.749649 TTTTGGTTGAGCACGGCAAT 59.250 45.000 0.00 0.00 0.00 3.56
5333 7642 0.532573 TTTTTGGTTGAGCACGGCAA 59.467 45.000 0.00 0.00 0.00 4.52
5334 7643 0.102120 CTTTTTGGTTGAGCACGGCA 59.898 50.000 0.00 0.00 0.00 5.69
5335 7644 0.597377 CCTTTTTGGTTGAGCACGGC 60.597 55.000 0.00 0.00 0.00 5.68
5336 7645 1.028905 TCCTTTTTGGTTGAGCACGG 58.971 50.000 0.00 0.00 37.07 4.94
5337 7646 2.861462 TTCCTTTTTGGTTGAGCACG 57.139 45.000 0.00 0.00 37.07 5.34
5338 7647 5.175127 TCTTTTTCCTTTTTGGTTGAGCAC 58.825 37.500 0.00 0.00 37.07 4.40
5339 7648 5.413309 TCTTTTTCCTTTTTGGTTGAGCA 57.587 34.783 0.00 0.00 37.07 4.26
5340 7649 6.735678 TTTCTTTTTCCTTTTTGGTTGAGC 57.264 33.333 0.00 0.00 37.07 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.