Multiple sequence alignment - TraesCS3D01G211300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G211300 chr3D 100.000 3817 0 0 1 3817 282337568 282333752 0.000000e+00 7049.0
1 TraesCS3D01G211300 chr3D 100.000 3087 0 0 4330 7416 282333239 282330153 0.000000e+00 5701.0
2 TraesCS3D01G211300 chr3D 92.289 415 24 7 7007 7416 577157051 577157462 3.860000e-162 582.0
3 TraesCS3D01G211300 chr3D 92.214 411 28 3 7008 7415 218256913 218257322 4.990000e-161 579.0
4 TraesCS3D01G211300 chr3D 85.366 410 52 7 4698 5103 646965 646560 1.150000e-112 418.0
5 TraesCS3D01G211300 chr3D 77.922 308 58 7 68 372 566434629 566434929 4.570000e-42 183.0
6 TraesCS3D01G211300 chr3D 100.000 29 0 0 6036 6064 529787204 529787176 4.000000e-03 54.7
7 TraesCS3D01G211300 chr3A 93.834 1946 55 27 5102 7004 368412455 368414378 0.000000e+00 2868.0
8 TraesCS3D01G211300 chr3A 94.403 1197 51 6 982 2167 368411268 368412459 0.000000e+00 1825.0
9 TraesCS3D01G211300 chr3A 90.471 997 73 12 1 983 368410249 368411237 0.000000e+00 1295.0
10 TraesCS3D01G211300 chr3A 91.041 413 31 6 7008 7416 335487066 335487476 3.020000e-153 553.0
11 TraesCS3D01G211300 chr3A 87.773 458 53 3 4332 4787 176154847 176155303 3.940000e-147 532.0
12 TraesCS3D01G211300 chr3A 79.175 509 66 19 1124 1612 30344858 30345346 4.320000e-82 316.0
13 TraesCS3D01G211300 chr3A 77.099 393 71 14 6070 6453 30346610 30346992 7.540000e-50 209.0
14 TraesCS3D01G211300 chr3B 94.245 1755 65 11 5103 6835 368540490 368538750 0.000000e+00 2649.0
15 TraesCS3D01G211300 chr3B 90.679 1105 80 4 2167 3254 370958123 370957025 0.000000e+00 1448.0
16 TraesCS3D01G211300 chr3B 91.269 985 66 9 8 983 368547951 368546978 0.000000e+00 1325.0
17 TraesCS3D01G211300 chr3B 96.578 526 15 3 979 1502 368546941 368546417 0.000000e+00 869.0
18 TraesCS3D01G211300 chr3B 93.061 490 25 4 1497 1980 368541202 368540716 0.000000e+00 708.0
19 TraesCS3D01G211300 chr3B 75.728 721 109 43 5300 5997 35875405 35874728 1.210000e-77 302.0
20 TraesCS3D01G211300 chr3B 78.143 517 61 27 1124 1613 35876650 35876159 1.580000e-71 281.0
21 TraesCS3D01G211300 chr3B 94.054 185 10 1 1983 2167 368540670 368540487 5.670000e-71 279.0
22 TraesCS3D01G211300 chr3B 96.774 93 2 1 6913 7004 368538682 368538590 3.580000e-33 154.0
23 TraesCS3D01G211300 chr3B 97.143 35 1 0 6032 6066 516002697 516002663 8.040000e-05 60.2
24 TraesCS3D01G211300 chr3B 100.000 29 0 0 1 29 368547970 368547942 4.000000e-03 54.7
25 TraesCS3D01G211300 chr3B 100.000 29 0 0 6036 6064 700376617 700376589 4.000000e-03 54.7
26 TraesCS3D01G211300 chr1D 93.409 1684 77 16 2166 3817 62131246 62129565 0.000000e+00 2464.0
27 TraesCS3D01G211300 chr1D 90.154 1493 112 11 2167 3655 479040408 479041869 0.000000e+00 1910.0
28 TraesCS3D01G211300 chr1D 93.588 733 34 5 4392 5115 487613381 487614109 0.000000e+00 1081.0
29 TraesCS3D01G211300 chr1D 91.209 455 37 3 4335 4787 292531800 292531347 3.800000e-172 616.0
30 TraesCS3D01G211300 chr1D 92.271 414 24 7 7007 7416 18678021 18677612 1.390000e-161 580.0
31 TraesCS3D01G211300 chr1D 96.970 33 0 1 6033 6064 461387086 461387054 4.000000e-03 54.7
32 TraesCS3D01G211300 chr7D 93.558 1661 90 2 2163 3806 186398827 186400487 0.000000e+00 2459.0
33 TraesCS3D01G211300 chr7D 93.083 1677 88 7 2167 3817 521573167 521574841 0.000000e+00 2429.0
34 TraesCS3D01G211300 chr7D 93.967 1326 64 6 2169 3478 140762742 140761417 0.000000e+00 1991.0
35 TraesCS3D01G211300 chr7D 92.022 1266 79 12 2167 3413 310992898 310994160 0.000000e+00 1759.0
36 TraesCS3D01G211300 chr7D 87.515 817 54 11 4332 5101 521575236 521576051 0.000000e+00 900.0
37 TraesCS3D01G211300 chr7D 88.318 779 47 12 4366 5102 538330325 538331101 0.000000e+00 894.0
38 TraesCS3D01G211300 chr7D 86.441 413 49 7 4691 5100 45825964 45826372 5.280000e-121 446.0
39 TraesCS3D01G211300 chr6D 92.639 1603 99 9 2233 3817 9767240 9765639 0.000000e+00 2289.0
40 TraesCS3D01G211300 chr6D 93.787 1513 74 10 2305 3817 463882663 463881171 0.000000e+00 2255.0
41 TraesCS3D01G211300 chr6D 90.984 1697 86 13 2166 3817 138815346 138813672 0.000000e+00 2224.0
42 TraesCS3D01G211300 chr6D 89.380 1177 118 7 2500 3673 331698572 331699744 0.000000e+00 1474.0
43 TraesCS3D01G211300 chr6D 93.272 758 42 8 4350 5103 76000810 76000058 0.000000e+00 1109.0
44 TraesCS3D01G211300 chr6D 91.266 790 47 8 4340 5112 138813098 138812314 0.000000e+00 1057.0
45 TraesCS3D01G211300 chr6D 91.895 765 39 11 4355 5100 463880495 463879735 0.000000e+00 1048.0
46 TraesCS3D01G211300 chr6D 92.476 412 25 6 7008 7416 287023825 287024233 1.070000e-162 584.0
47 TraesCS3D01G211300 chr6D 86.331 417 48 8 4691 5103 178000865 178000454 5.280000e-121 446.0
48 TraesCS3D01G211300 chr4D 94.494 1453 64 8 2167 3603 81335041 81333589 0.000000e+00 2226.0
49 TraesCS3D01G211300 chr4D 92.519 401 27 3 4389 4787 96721589 96721190 8.350000e-159 571.0
50 TraesCS3D01G211300 chr6A 92.732 1541 94 3 2285 3807 366032846 366034386 0.000000e+00 2209.0
51 TraesCS3D01G211300 chr6A 93.357 1114 67 5 2305 3416 100318212 100317104 0.000000e+00 1640.0
52 TraesCS3D01G211300 chr6A 85.301 415 50 11 4691 5100 520839488 520839080 1.150000e-112 418.0
53 TraesCS3D01G211300 chr2D 91.972 1557 94 17 2167 3702 349729404 349730950 0.000000e+00 2154.0
54 TraesCS3D01G211300 chr2D 91.496 1270 83 15 2166 3416 392699957 392698694 0.000000e+00 1724.0
55 TraesCS3D01G211300 chr2D 91.202 1273 87 17 2165 3416 209031887 209030619 0.000000e+00 1707.0
56 TraesCS3D01G211300 chr2D 86.232 414 48 8 4691 5100 392697800 392697392 2.460000e-119 440.0
57 TraesCS3D01G211300 chr5A 89.975 1586 110 10 2249 3813 36252002 36250445 0.000000e+00 2002.0
58 TraesCS3D01G211300 chr5A 100.000 29 0 0 6036 6064 18858234 18858206 4.000000e-03 54.7
59 TraesCS3D01G211300 chr1A 90.105 1526 108 15 2305 3813 245941985 245940486 0.000000e+00 1941.0
60 TraesCS3D01G211300 chr7B 91.990 412 28 5 7007 7416 31829026 31828618 2.320000e-159 573.0
61 TraesCS3D01G211300 chr7B 100.000 29 0 0 6036 6064 56995892 56995864 4.000000e-03 54.7
62 TraesCS3D01G211300 chr2A 91.101 427 29 7 6993 7416 54357728 54358148 3.000000e-158 569.0
63 TraesCS3D01G211300 chr2A 86.250 400 43 12 4710 5104 628732452 628732060 2.470000e-114 424.0
64 TraesCS3D01G211300 chr5D 91.707 410 30 3 7008 7416 382291981 382292387 3.880000e-157 566.0
65 TraesCS3D01G211300 chr1B 91.019 412 31 6 7008 7416 15272052 15272460 1.090000e-152 551.0
66 TraesCS3D01G211300 chr1B 97.368 38 0 1 5141 5177 38172758 38172721 6.210000e-06 63.9
67 TraesCS3D01G211300 chr2B 92.683 41 2 1 6025 6064 628399162 628399202 2.890000e-04 58.4
68 TraesCS3D01G211300 chrUn 83.607 61 8 2 560 619 115097516 115097575 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G211300 chr3D 282330153 282337568 7415 True 6375.000000 7049 100.000000 1 7416 2 chr3D.!!$R3 7415
1 TraesCS3D01G211300 chr3A 368410249 368414378 4129 False 1996.000000 2868 92.902667 1 7004 3 chr3A.!!$F4 7003
2 TraesCS3D01G211300 chr3A 30344858 30346992 2134 False 262.500000 316 78.137000 1124 6453 2 chr3A.!!$F3 5329
3 TraesCS3D01G211300 chr3B 370957025 370958123 1098 True 1448.000000 1448 90.679000 2167 3254 1 chr3B.!!$R1 1087
4 TraesCS3D01G211300 chr3B 368538590 368541202 2612 True 947.500000 2649 94.533500 1497 7004 4 chr3B.!!$R5 5507
5 TraesCS3D01G211300 chr3B 368546417 368547970 1553 True 749.566667 1325 95.949000 1 1502 3 chr3B.!!$R6 1501
6 TraesCS3D01G211300 chr3B 35874728 35876650 1922 True 291.500000 302 76.935500 1124 5997 2 chr3B.!!$R4 4873
7 TraesCS3D01G211300 chr1D 62129565 62131246 1681 True 2464.000000 2464 93.409000 2166 3817 1 chr1D.!!$R2 1651
8 TraesCS3D01G211300 chr1D 479040408 479041869 1461 False 1910.000000 1910 90.154000 2167 3655 1 chr1D.!!$F1 1488
9 TraesCS3D01G211300 chr1D 487613381 487614109 728 False 1081.000000 1081 93.588000 4392 5115 1 chr1D.!!$F2 723
10 TraesCS3D01G211300 chr7D 186398827 186400487 1660 False 2459.000000 2459 93.558000 2163 3806 1 chr7D.!!$F2 1643
11 TraesCS3D01G211300 chr7D 140761417 140762742 1325 True 1991.000000 1991 93.967000 2169 3478 1 chr7D.!!$R1 1309
12 TraesCS3D01G211300 chr7D 310992898 310994160 1262 False 1759.000000 1759 92.022000 2167 3413 1 chr7D.!!$F3 1246
13 TraesCS3D01G211300 chr7D 521573167 521576051 2884 False 1664.500000 2429 90.299000 2167 5101 2 chr7D.!!$F5 2934
14 TraesCS3D01G211300 chr7D 538330325 538331101 776 False 894.000000 894 88.318000 4366 5102 1 chr7D.!!$F4 736
15 TraesCS3D01G211300 chr6D 9765639 9767240 1601 True 2289.000000 2289 92.639000 2233 3817 1 chr6D.!!$R1 1584
16 TraesCS3D01G211300 chr6D 463879735 463882663 2928 True 1651.500000 2255 92.841000 2305 5100 2 chr6D.!!$R5 2795
17 TraesCS3D01G211300 chr6D 138812314 138815346 3032 True 1640.500000 2224 91.125000 2166 5112 2 chr6D.!!$R4 2946
18 TraesCS3D01G211300 chr6D 331698572 331699744 1172 False 1474.000000 1474 89.380000 2500 3673 1 chr6D.!!$F2 1173
19 TraesCS3D01G211300 chr6D 76000058 76000810 752 True 1109.000000 1109 93.272000 4350 5103 1 chr6D.!!$R2 753
20 TraesCS3D01G211300 chr4D 81333589 81335041 1452 True 2226.000000 2226 94.494000 2167 3603 1 chr4D.!!$R1 1436
21 TraesCS3D01G211300 chr6A 366032846 366034386 1540 False 2209.000000 2209 92.732000 2285 3807 1 chr6A.!!$F1 1522
22 TraesCS3D01G211300 chr6A 100317104 100318212 1108 True 1640.000000 1640 93.357000 2305 3416 1 chr6A.!!$R1 1111
23 TraesCS3D01G211300 chr2D 349729404 349730950 1546 False 2154.000000 2154 91.972000 2167 3702 1 chr2D.!!$F1 1535
24 TraesCS3D01G211300 chr2D 209030619 209031887 1268 True 1707.000000 1707 91.202000 2165 3416 1 chr2D.!!$R1 1251
25 TraesCS3D01G211300 chr2D 392697392 392699957 2565 True 1082.000000 1724 88.864000 2166 5100 2 chr2D.!!$R2 2934
26 TraesCS3D01G211300 chr5A 36250445 36252002 1557 True 2002.000000 2002 89.975000 2249 3813 1 chr5A.!!$R2 1564
27 TraesCS3D01G211300 chr1A 245940486 245941985 1499 True 1941.000000 1941 90.105000 2305 3813 1 chr1A.!!$R1 1508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
931 952 0.106708 TCACACTGCCACTGAACTCC 59.893 55.0 0.00 0.0 0.00 3.85 F
1368 1461 0.248825 CTGCATCTCCCTCGACTTCG 60.249 60.0 0.00 0.0 41.45 3.79 F
2226 2405 0.902984 TAAGGGCAGAACAGCGGAGA 60.903 55.0 0.00 0.0 34.64 3.71 F
2583 2802 0.246086 CTTGCTGAACTCCTCGAGCT 59.754 55.0 6.99 0.0 32.04 4.09 F
3727 3983 0.107654 AAATACCACAGAGGGCTCGC 60.108 55.0 0.00 0.0 43.89 5.03 F
4796 8545 0.396835 GACTAGGGTTCCTACCGGCT 60.397 60.0 0.00 0.0 46.04 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1899 2018 0.670162 AAGTTGCACATCACACTGGC 59.330 50.000 0.00 0.0 0.0 4.85 R
2583 2802 1.601903 GTGTTTGACGCTGGTTGATCA 59.398 47.619 0.00 0.0 0.0 2.92 R
3708 3964 0.107654 GCGAGCCCTCTGTGGTATTT 60.108 55.000 0.00 0.0 0.0 1.40 R
4562 8296 1.067250 GCCAGCTCCATCGACTCTC 59.933 63.158 0.00 0.0 0.0 3.20 R
4811 8560 0.179000 CTCCGCTGTTCTGCCCTTAT 59.821 55.000 0.00 0.0 0.0 1.73 R
6432 10476 0.948623 CCAACTTGTCGCCGTCATGA 60.949 55.000 4.44 0.0 0.0 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 61 1.656652 CCTCTATTCAACTGGCACGG 58.343 55.000 0.00 0.00 42.99 4.94
101 112 0.526524 GTTCGATGGAGAGGCTGTCG 60.527 60.000 5.49 1.56 0.00 4.35
153 165 1.799181 CGTGGTGCAACTAGGAGATCG 60.799 57.143 2.04 0.00 34.99 3.69
182 194 3.131478 GTGGTATGGTGCGGTGCC 61.131 66.667 0.00 0.00 0.00 5.01
279 291 0.670854 GAGTGGGTTTCTCGGCAGTC 60.671 60.000 0.00 0.00 0.00 3.51
339 351 3.452627 ACCTATTTGAATGCGGAGAGAGT 59.547 43.478 0.00 0.00 0.00 3.24
350 362 0.748729 GGAGAGAGTCGTCCGGTCAT 60.749 60.000 0.00 0.00 0.00 3.06
415 428 3.554692 CATTCTCGGTCGGCGTGC 61.555 66.667 6.85 0.68 0.00 5.34
530 544 0.317479 ACGAGAAAACAGAGTCGGGG 59.683 55.000 0.00 0.00 36.74 5.73
558 572 2.697229 TGTGGACCAATGACAAAATGCA 59.303 40.909 0.00 0.00 0.00 3.96
574 588 1.819632 GCATCCGGACCGCTTGATT 60.820 57.895 18.27 0.00 0.00 2.57
622 636 1.936547 CGCTTTGGAGATGTCCTTAGC 59.063 52.381 19.29 19.29 44.30 3.09
798 819 7.881775 AAGAAACTGCTAAAAAGGAAGAGAA 57.118 32.000 0.00 0.00 0.00 2.87
931 952 0.106708 TCACACTGCCACTGAACTCC 59.893 55.000 0.00 0.00 0.00 3.85
932 953 0.886490 CACACTGCCACTGAACTCCC 60.886 60.000 0.00 0.00 0.00 4.30
934 955 1.770110 ACTGCCACTGAACTCCCCA 60.770 57.895 0.00 0.00 0.00 4.96
935 956 1.352622 ACTGCCACTGAACTCCCCAA 61.353 55.000 0.00 0.00 0.00 4.12
936 957 0.890996 CTGCCACTGAACTCCCCAAC 60.891 60.000 0.00 0.00 0.00 3.77
937 958 1.352622 TGCCACTGAACTCCCCAACT 61.353 55.000 0.00 0.00 0.00 3.16
1062 1134 2.820037 CGCTTCCCGCCTTCTTCC 60.820 66.667 0.00 0.00 34.21 3.46
1114 1186 2.708216 TTATGAGCTGCGATTTCCCA 57.292 45.000 0.00 0.00 0.00 4.37
1119 1191 1.064654 GAGCTGCGATTTCCCATGTTC 59.935 52.381 0.00 0.00 0.00 3.18
1293 1377 1.544691 GAGAACCCTCTGCTTCGTACA 59.455 52.381 0.00 0.00 36.50 2.90
1368 1461 0.248825 CTGCATCTCCCTCGACTTCG 60.249 60.000 0.00 0.00 41.45 3.79
1495 1600 1.273552 CCAGTTCTCCCTCCCTCTCTT 60.274 57.143 0.00 0.00 0.00 2.85
1507 1612 5.389520 CCTCCCTCTCTTTCTTTTCCTTTT 58.610 41.667 0.00 0.00 0.00 2.27
1508 1613 5.242615 CCTCCCTCTCTTTCTTTTCCTTTTG 59.757 44.000 0.00 0.00 0.00 2.44
1509 1614 6.013554 TCCCTCTCTTTCTTTTCCTTTTGA 57.986 37.500 0.00 0.00 0.00 2.69
1553 1658 2.032681 GAGGTGGAGGCGCTGTTT 59.967 61.111 7.64 0.00 0.00 2.83
1583 1688 3.280295 CAAGAAGATCAGCTGCTCCATT 58.720 45.455 13.81 2.97 28.02 3.16
1615 1720 1.555075 GCTCATCCACAAGGTACCTCA 59.445 52.381 16.64 0.00 35.89 3.86
1669 1778 6.535508 GCTTCTTCCGATCAGTAAATTAGTGT 59.464 38.462 7.62 0.00 0.00 3.55
1727 1836 8.281212 ACAGGGAGCAGTTTATATGTTTTTAG 57.719 34.615 0.00 0.00 0.00 1.85
1759 1874 2.101917 CGTGTTCTATCCCGTGGGTAAT 59.898 50.000 4.53 0.00 36.47 1.89
1770 1885 1.613255 CGTGGGTAATTGGGTTCTGCT 60.613 52.381 0.00 0.00 0.00 4.24
1773 1888 2.158385 TGGGTAATTGGGTTCTGCTTGT 60.158 45.455 0.00 0.00 0.00 3.16
1832 1947 5.698089 CGCATGGATAGTGACACTTTGATAT 59.302 40.000 14.50 0.00 0.00 1.63
1864 1979 8.658499 ATGATCGTTTAGGAGTATTTGGTTAC 57.342 34.615 0.00 0.00 0.00 2.50
1866 1981 8.095792 TGATCGTTTAGGAGTATTTGGTTACAA 58.904 33.333 0.00 0.00 34.07 2.41
1921 2040 3.141398 CCAGTGTGATGTGCAACTTAGT 58.859 45.455 0.00 0.00 38.04 2.24
1986 2148 0.957395 GACCAGTGCACATGGGAGTG 60.957 60.000 27.90 14.30 42.48 3.51
2056 2230 1.902918 TGTGGCTTCCATGTGCACC 60.903 57.895 15.69 0.00 35.28 5.01
2096 2275 3.297830 TCTCTGTATGTGTGGTTGTCG 57.702 47.619 0.00 0.00 0.00 4.35
2145 2324 5.360429 TGATCCAACATAATGGTGATTGGTG 59.640 40.000 0.00 0.00 37.20 4.17
2159 2338 2.093306 TTGGTGAAGTATGGAGTGCG 57.907 50.000 0.00 0.00 0.00 5.34
2162 2341 2.764010 TGGTGAAGTATGGAGTGCGTAT 59.236 45.455 0.00 0.00 0.00 3.06
2163 2342 3.955551 TGGTGAAGTATGGAGTGCGTATA 59.044 43.478 0.00 0.00 0.00 1.47
2226 2405 0.902984 TAAGGGCAGAACAGCGGAGA 60.903 55.000 0.00 0.00 34.64 3.71
2286 2468 2.110006 GAGGAAGGAGGATGGCGC 59.890 66.667 0.00 0.00 0.00 6.53
2582 2801 1.357991 GCTTGCTGAACTCCTCGAGC 61.358 60.000 6.99 0.00 32.04 5.03
2583 2802 0.246086 CTTGCTGAACTCCTCGAGCT 59.754 55.000 6.99 0.00 32.04 4.09
3086 3336 1.192146 CCGTGGAGGTGAAGGGAAGA 61.192 60.000 0.00 0.00 34.51 2.87
3290 3541 2.342279 CCGCGGAAGAACTGGTCA 59.658 61.111 24.07 0.00 0.00 4.02
3356 3607 1.560923 CGAAGTCGATCTTGGCGAAT 58.439 50.000 5.20 0.00 43.02 3.34
3710 3966 4.397832 GGGGACGGCGGCTGTAAA 62.398 66.667 14.66 0.00 0.00 2.01
3711 3967 2.124860 GGGACGGCGGCTGTAAAT 60.125 61.111 14.66 0.00 0.00 1.40
3712 3968 1.144496 GGGACGGCGGCTGTAAATA 59.856 57.895 14.66 0.00 0.00 1.40
3713 3969 1.156034 GGGACGGCGGCTGTAAATAC 61.156 60.000 14.66 1.46 0.00 1.89
3714 3970 1.156034 GGACGGCGGCTGTAAATACC 61.156 60.000 14.66 7.67 0.00 2.73
3715 3971 0.460635 GACGGCGGCTGTAAATACCA 60.461 55.000 15.59 0.00 0.00 3.25
3716 3972 0.741927 ACGGCGGCTGTAAATACCAC 60.742 55.000 13.83 0.00 0.00 4.16
3717 3973 0.741574 CGGCGGCTGTAAATACCACA 60.742 55.000 7.61 0.00 0.00 4.17
3718 3974 1.014352 GGCGGCTGTAAATACCACAG 58.986 55.000 0.00 0.00 45.08 3.66
3719 3975 1.406341 GGCGGCTGTAAATACCACAGA 60.406 52.381 0.00 0.00 45.10 3.41
3720 3976 1.933853 GCGGCTGTAAATACCACAGAG 59.066 52.381 6.67 1.30 45.10 3.35
3721 3977 2.550978 CGGCTGTAAATACCACAGAGG 58.449 52.381 6.67 0.00 45.10 3.69
3722 3978 2.741878 CGGCTGTAAATACCACAGAGGG 60.742 54.545 6.67 0.00 45.10 4.30
3723 3979 2.289565 GCTGTAAATACCACAGAGGGC 58.710 52.381 6.67 0.00 45.10 5.19
3724 3980 2.092914 GCTGTAAATACCACAGAGGGCT 60.093 50.000 6.67 0.00 45.10 5.19
3725 3981 3.798202 CTGTAAATACCACAGAGGGCTC 58.202 50.000 0.00 0.00 45.10 4.70
3726 3982 2.167693 TGTAAATACCACAGAGGGCTCG 59.832 50.000 0.00 0.00 43.89 5.03
3727 3983 0.107654 AAATACCACAGAGGGCTCGC 60.108 55.000 0.00 0.00 43.89 5.03
3728 3984 2.298158 AATACCACAGAGGGCTCGCG 62.298 60.000 0.00 0.00 43.89 5.87
3778 4034 3.782244 GAACGTCAGCAGCGGCAG 61.782 66.667 12.44 2.56 44.61 4.85
3815 4071 4.742201 GAGAACGGCGGCTGCAGA 62.742 66.667 24.97 0.00 45.35 4.26
3816 4072 4.749310 AGAACGGCGGCTGCAGAG 62.749 66.667 24.97 14.49 45.35 3.35
4562 8296 3.886001 GGGGAGTATTGGGCCGGG 61.886 72.222 2.18 0.00 0.00 5.73
4563 8297 2.770904 GGGAGTATTGGGCCGGGA 60.771 66.667 2.18 0.00 0.00 5.14
4736 8485 4.572571 GGTGGTGGTGGCGGTGAA 62.573 66.667 0.00 0.00 0.00 3.18
4753 8502 1.076332 GAAGACATGGTCGAAACCCG 58.924 55.000 0.00 0.00 45.83 5.28
4795 8544 1.398174 GGACTAGGGTTCCTACCGGC 61.398 65.000 0.00 0.00 46.04 6.13
4796 8545 0.396835 GACTAGGGTTCCTACCGGCT 60.397 60.000 0.00 0.00 46.04 5.52
4799 8548 1.144503 CTAGGGTTCCTACCGGCTCTA 59.855 57.143 0.00 0.00 46.04 2.43
4804 8553 0.924823 TTCCTACCGGCTCTACTCCT 59.075 55.000 0.00 0.00 0.00 3.69
4811 8560 2.243221 ACCGGCTCTACTCCTTAGGTTA 59.757 50.000 0.00 0.00 0.00 2.85
4814 8563 5.075493 CCGGCTCTACTCCTTAGGTTATAA 58.925 45.833 0.00 0.00 0.00 0.98
4818 8567 5.047164 GCTCTACTCCTTAGGTTATAAGGGC 60.047 48.000 12.52 4.74 43.21 5.19
4821 8570 4.892198 ACTCCTTAGGTTATAAGGGCAGA 58.108 43.478 12.52 0.00 43.21 4.26
4823 8572 5.130643 ACTCCTTAGGTTATAAGGGCAGAAC 59.869 44.000 12.52 0.00 43.21 3.01
4824 8573 5.034200 TCCTTAGGTTATAAGGGCAGAACA 58.966 41.667 12.52 0.00 43.21 3.18
4826 8575 3.283259 AGGTTATAAGGGCAGAACAGC 57.717 47.619 0.00 0.00 0.00 4.40
4831 8580 0.902984 TAAGGGCAGAACAGCGGAGA 60.903 55.000 0.00 0.00 34.64 3.71
4832 8581 1.557269 AAGGGCAGAACAGCGGAGAT 61.557 55.000 0.00 0.00 34.64 2.75
4833 8582 1.078143 GGGCAGAACAGCGGAGATT 60.078 57.895 0.00 0.00 34.64 2.40
4838 8587 0.539051 AGAACAGCGGAGATTGAGGG 59.461 55.000 0.00 0.00 0.00 4.30
4839 8588 1.078143 AACAGCGGAGATTGAGGGC 60.078 57.895 0.00 0.00 0.00 5.19
4840 8589 2.587194 CAGCGGAGATTGAGGGCG 60.587 66.667 0.00 0.00 0.00 6.13
4841 8590 2.759973 AGCGGAGATTGAGGGCGA 60.760 61.111 0.00 0.00 0.00 5.54
4843 8592 2.419198 CGGAGATTGAGGGCGAGG 59.581 66.667 0.00 0.00 0.00 4.63
4844 8593 2.127869 CGGAGATTGAGGGCGAGGA 61.128 63.158 0.00 0.00 0.00 3.71
5444 9476 7.273381 GCTGCGAAGTTCATTATTTACACAAAT 59.727 33.333 3.32 0.00 38.02 2.32
5503 9536 8.429493 TTCACATCAGATGTTGCTAGAAATAG 57.571 34.615 13.79 0.00 42.70 1.73
5708 9744 6.266131 TGTGATGAGATATTTAAAGGGGCT 57.734 37.500 0.00 0.00 0.00 5.19
6271 10308 4.700268 TGTAAATTACAGCCAGCATGTG 57.300 40.909 1.08 0.00 34.06 3.21
6417 10461 3.131396 ACACGGCAGTTGAAGACTAAAG 58.869 45.455 0.00 0.00 36.65 1.85
6432 10476 5.542779 AGACTAAAGAGTGCAAGATTCGTT 58.457 37.500 0.00 0.00 35.45 3.85
6463 10507 4.213270 GCGACAAGTTGGCAGCATATTATA 59.787 41.667 17.12 0.00 0.00 0.98
6474 10518 5.293814 GGCAGCATATTATATCTGTCAGCTG 59.706 44.000 7.63 7.63 46.95 4.24
6525 10569 8.478877 AGAAACAGAATACTCATAACCACCTAG 58.521 37.037 0.00 0.00 0.00 3.02
6628 10682 4.320202 GGCAACTTAGAAATGAAGCAACGA 60.320 41.667 0.00 0.00 0.00 3.85
6683 10737 5.939764 ACATACATCACTCCTTTAGCTCA 57.060 39.130 0.00 0.00 0.00 4.26
6697 10751 2.285824 GCTCAGAGAAGCTCAGGGT 58.714 57.895 0.00 0.00 39.27 4.34
6698 10752 1.479709 GCTCAGAGAAGCTCAGGGTA 58.520 55.000 0.00 0.00 39.27 3.69
6718 10772 5.867716 GGGTAAACTGTACATATATGCTCGG 59.132 44.000 12.79 12.46 0.00 4.63
6746 10800 2.158475 ACAAGGGAATTCAGACAAGGCA 60.158 45.455 7.93 0.00 0.00 4.75
6786 10840 5.471456 AGTTCTGGAATCAGCAGTTAGTTTG 59.529 40.000 0.00 0.00 40.69 2.93
6790 10844 4.213270 TGGAATCAGCAGTTAGTTTGTTCG 59.787 41.667 0.00 0.00 0.00 3.95
6864 10945 9.255304 TCATATTAGCTTTGGTTGTTGTTTTTC 57.745 29.630 0.00 0.00 0.00 2.29
6868 10949 5.410924 AGCTTTGGTTGTTGTTTTTCTCTC 58.589 37.500 0.00 0.00 0.00 3.20
6869 10950 5.185828 AGCTTTGGTTGTTGTTTTTCTCTCT 59.814 36.000 0.00 0.00 0.00 3.10
7001 11085 9.132923 CAGTCCGTGGTAGGAACATATATATAT 57.867 37.037 0.00 0.00 42.77 0.86
7022 11106 2.791655 ACAGTACTAGCAAAAAGGCCC 58.208 47.619 0.00 0.00 0.00 5.80
7023 11107 1.737793 CAGTACTAGCAAAAAGGCCCG 59.262 52.381 0.00 0.00 0.00 6.13
7024 11108 1.350019 AGTACTAGCAAAAAGGCCCGT 59.650 47.619 0.00 0.00 0.00 5.28
7025 11109 1.467342 GTACTAGCAAAAAGGCCCGTG 59.533 52.381 0.00 0.00 0.00 4.94
7026 11110 1.212751 CTAGCAAAAAGGCCCGTGC 59.787 57.895 0.00 4.01 37.26 5.34
7027 11111 2.527547 CTAGCAAAAAGGCCCGTGCG 62.528 60.000 0.00 0.00 41.90 5.34
7028 11112 4.279043 GCAAAAAGGCCCGTGCGT 62.279 61.111 0.00 0.00 38.85 5.24
7029 11113 2.415426 CAAAAAGGCCCGTGCGTT 59.585 55.556 0.00 0.00 46.85 4.84
7030 11114 1.948635 CAAAAAGGCCCGTGCGTTG 60.949 57.895 0.00 0.00 44.30 4.10
7031 11115 3.783478 AAAAAGGCCCGTGCGTTGC 62.783 57.895 0.00 0.00 44.30 4.17
7074 11158 8.556213 ACCACACGCTCTTAATTTATAAAAGA 57.444 30.769 1.21 0.27 0.00 2.52
7075 11159 9.174166 ACCACACGCTCTTAATTTATAAAAGAT 57.826 29.630 1.21 0.00 0.00 2.40
7076 11160 9.438291 CCACACGCTCTTAATTTATAAAAGATG 57.562 33.333 1.21 0.13 0.00 2.90
7077 11161 9.438291 CACACGCTCTTAATTTATAAAAGATGG 57.562 33.333 1.21 0.00 0.00 3.51
7078 11162 9.174166 ACACGCTCTTAATTTATAAAAGATGGT 57.826 29.630 1.21 0.18 0.00 3.55
7079 11163 9.651718 CACGCTCTTAATTTATAAAAGATGGTC 57.348 33.333 1.21 0.00 0.00 4.02
7080 11164 9.614792 ACGCTCTTAATTTATAAAAGATGGTCT 57.385 29.630 1.21 0.00 0.00 3.85
7100 11184 9.717942 ATGGTCTATAATCTGAGAATTTGTAGC 57.282 33.333 0.00 0.00 0.00 3.58
7101 11185 8.928448 TGGTCTATAATCTGAGAATTTGTAGCT 58.072 33.333 0.00 0.00 0.00 3.32
7107 11191 9.717942 ATAATCTGAGAATTTGTAGCTATGACC 57.282 33.333 0.00 0.00 0.00 4.02
7108 11192 5.918608 TCTGAGAATTTGTAGCTATGACCC 58.081 41.667 0.00 0.00 0.00 4.46
7109 11193 5.425217 TCTGAGAATTTGTAGCTATGACCCA 59.575 40.000 0.00 0.00 0.00 4.51
7110 11194 6.061022 TGAGAATTTGTAGCTATGACCCAA 57.939 37.500 0.00 0.00 0.00 4.12
7111 11195 6.480763 TGAGAATTTGTAGCTATGACCCAAA 58.519 36.000 8.41 8.41 0.00 3.28
7112 11196 6.374333 TGAGAATTTGTAGCTATGACCCAAAC 59.626 38.462 8.21 0.00 0.00 2.93
7113 11197 6.245408 AGAATTTGTAGCTATGACCCAAACA 58.755 36.000 8.21 0.00 0.00 2.83
7114 11198 6.719370 AGAATTTGTAGCTATGACCCAAACAA 59.281 34.615 8.21 0.00 0.00 2.83
7115 11199 6.909550 ATTTGTAGCTATGACCCAAACAAA 57.090 33.333 8.21 8.01 39.03 2.83
7116 11200 6.716934 TTTGTAGCTATGACCCAAACAAAA 57.283 33.333 0.00 0.00 33.73 2.44
7117 11201 6.716934 TTGTAGCTATGACCCAAACAAAAA 57.283 33.333 0.00 0.00 0.00 1.94
7118 11202 6.909550 TGTAGCTATGACCCAAACAAAAAT 57.090 33.333 0.00 0.00 0.00 1.82
7119 11203 6.686630 TGTAGCTATGACCCAAACAAAAATG 58.313 36.000 0.00 0.00 0.00 2.32
7120 11204 5.151297 AGCTATGACCCAAACAAAAATGG 57.849 39.130 0.00 0.00 36.42 3.16
7121 11205 4.592778 AGCTATGACCCAAACAAAAATGGT 59.407 37.500 0.00 0.00 34.79 3.55
7122 11206 4.929211 GCTATGACCCAAACAAAAATGGTC 59.071 41.667 0.00 0.00 44.57 4.02
7123 11207 5.279456 GCTATGACCCAAACAAAAATGGTCT 60.279 40.000 8.31 0.00 44.60 3.85
7124 11208 5.628797 ATGACCCAAACAAAAATGGTCTT 57.371 34.783 8.31 0.00 44.60 3.01
7125 11209 6.739331 ATGACCCAAACAAAAATGGTCTTA 57.261 33.333 8.31 0.00 44.60 2.10
7126 11210 6.546428 TGACCCAAACAAAAATGGTCTTAA 57.454 33.333 8.31 0.00 44.60 1.85
7127 11211 6.342111 TGACCCAAACAAAAATGGTCTTAAC 58.658 36.000 8.31 0.00 44.60 2.01
7128 11212 6.155393 TGACCCAAACAAAAATGGTCTTAACT 59.845 34.615 8.31 0.00 44.60 2.24
7129 11213 6.953101 ACCCAAACAAAAATGGTCTTAACTT 58.047 32.000 0.00 0.00 34.79 2.66
7130 11214 8.080363 ACCCAAACAAAAATGGTCTTAACTTA 57.920 30.769 0.00 0.00 34.79 2.24
7131 11215 8.710239 ACCCAAACAAAAATGGTCTTAACTTAT 58.290 29.630 0.00 0.00 34.79 1.73
7142 11226 9.662947 AATGGTCTTAACTTATAAAAGCGTAGT 57.337 29.630 0.00 0.00 36.05 2.73
7143 11227 9.662947 ATGGTCTTAACTTATAAAAGCGTAGTT 57.337 29.630 0.00 0.00 36.05 2.24
7144 11228 9.492973 TGGTCTTAACTTATAAAAGCGTAGTTT 57.507 29.630 0.00 0.00 36.05 2.66
7155 11239 5.526010 AAAGCGTAGTTTAAGATTCCACG 57.474 39.130 0.00 0.00 0.00 4.94
7156 11240 4.445452 AGCGTAGTTTAAGATTCCACGA 57.555 40.909 0.00 0.00 0.00 4.35
7157 11241 4.421948 AGCGTAGTTTAAGATTCCACGAG 58.578 43.478 0.00 0.00 0.00 4.18
7158 11242 4.157289 AGCGTAGTTTAAGATTCCACGAGA 59.843 41.667 0.00 0.00 0.00 4.04
7159 11243 4.499758 GCGTAGTTTAAGATTCCACGAGAG 59.500 45.833 0.00 0.00 0.00 3.20
7161 11245 6.091437 CGTAGTTTAAGATTCCACGAGAGTT 58.909 40.000 0.00 0.00 46.40 3.01
7162 11246 6.585322 CGTAGTTTAAGATTCCACGAGAGTTT 59.415 38.462 0.00 0.00 46.40 2.66
7163 11247 7.115947 CGTAGTTTAAGATTCCACGAGAGTTTT 59.884 37.037 0.00 0.00 46.40 2.43
7164 11248 9.415544 GTAGTTTAAGATTCCACGAGAGTTTTA 57.584 33.333 0.00 0.00 46.40 1.52
7166 11250 9.503399 AGTTTAAGATTCCACGAGAGTTTTATT 57.497 29.630 0.00 0.00 46.40 1.40
7169 11253 7.979444 AAGATTCCACGAGAGTTTTATTTCA 57.021 32.000 0.00 0.00 46.40 2.69
7170 11254 7.979444 AGATTCCACGAGAGTTTTATTTCAA 57.021 32.000 0.00 0.00 46.40 2.69
7171 11255 7.807680 AGATTCCACGAGAGTTTTATTTCAAC 58.192 34.615 0.00 0.00 46.40 3.18
7172 11256 6.928979 TTCCACGAGAGTTTTATTTCAACA 57.071 33.333 0.00 0.00 46.40 3.33
7173 11257 7.504924 TTCCACGAGAGTTTTATTTCAACAT 57.495 32.000 0.00 0.00 46.40 2.71
7174 11258 6.898041 TCCACGAGAGTTTTATTTCAACATG 58.102 36.000 0.00 0.00 46.40 3.21
7175 11259 6.072728 TCCACGAGAGTTTTATTTCAACATGG 60.073 38.462 0.00 0.00 46.40 3.66
7176 11260 5.569059 CACGAGAGTTTTATTTCAACATGGC 59.431 40.000 0.00 0.00 46.40 4.40
7177 11261 5.473504 ACGAGAGTTTTATTTCAACATGGCT 59.526 36.000 0.00 0.00 46.40 4.75
7178 11262 6.016276 ACGAGAGTTTTATTTCAACATGGCTT 60.016 34.615 0.00 0.00 46.40 4.35
7179 11263 6.306356 CGAGAGTTTTATTTCAACATGGCTTG 59.694 38.462 0.00 0.00 0.00 4.01
7180 11264 5.928264 AGAGTTTTATTTCAACATGGCTTGC 59.072 36.000 0.00 0.00 0.00 4.01
7181 11265 5.609423 AGTTTTATTTCAACATGGCTTGCA 58.391 33.333 0.00 0.00 0.00 4.08
7182 11266 6.232692 AGTTTTATTTCAACATGGCTTGCAT 58.767 32.000 0.00 0.00 0.00 3.96
7183 11267 6.148150 AGTTTTATTTCAACATGGCTTGCATG 59.852 34.615 0.00 0.00 36.22 4.06
7184 11268 1.798283 TTTCAACATGGCTTGCATGC 58.202 45.000 15.87 15.87 33.61 4.06
7185 11269 0.680061 TTCAACATGGCTTGCATGCA 59.320 45.000 24.15 18.46 33.61 3.96
7186 11270 0.245266 TCAACATGGCTTGCATGCAG 59.755 50.000 21.50 15.64 33.61 4.41
7187 11271 0.245266 CAACATGGCTTGCATGCAGA 59.755 50.000 21.50 11.08 33.61 4.26
7188 11272 1.134818 CAACATGGCTTGCATGCAGAT 60.135 47.619 21.50 13.34 33.61 2.90
7189 11273 1.191535 ACATGGCTTGCATGCAGATT 58.808 45.000 21.50 2.74 33.61 2.40
7190 11274 1.553248 ACATGGCTTGCATGCAGATTT 59.447 42.857 21.50 7.59 33.61 2.17
7191 11275 2.761767 ACATGGCTTGCATGCAGATTTA 59.238 40.909 21.50 4.49 33.61 1.40
7192 11276 3.196039 ACATGGCTTGCATGCAGATTTAA 59.804 39.130 21.50 3.67 33.61 1.52
7193 11277 4.141801 ACATGGCTTGCATGCAGATTTAAT 60.142 37.500 21.50 8.47 33.61 1.40
7194 11278 4.049546 TGGCTTGCATGCAGATTTAATC 57.950 40.909 21.50 0.00 34.04 1.75
7195 11279 3.181473 TGGCTTGCATGCAGATTTAATCC 60.181 43.478 21.50 10.43 34.04 3.01
7196 11280 3.047796 GCTTGCATGCAGATTTAATCCG 58.952 45.455 21.50 2.06 0.00 4.18
7197 11281 3.489738 GCTTGCATGCAGATTTAATCCGT 60.490 43.478 21.50 0.00 0.00 4.69
7198 11282 4.261155 GCTTGCATGCAGATTTAATCCGTA 60.261 41.667 21.50 0.00 0.00 4.02
7199 11283 4.811555 TGCATGCAGATTTAATCCGTAC 57.188 40.909 18.46 0.00 0.00 3.67
7200 11284 4.195416 TGCATGCAGATTTAATCCGTACA 58.805 39.130 18.46 0.00 0.00 2.90
7201 11285 4.637977 TGCATGCAGATTTAATCCGTACAA 59.362 37.500 18.46 0.00 0.00 2.41
7202 11286 5.124617 TGCATGCAGATTTAATCCGTACAAA 59.875 36.000 18.46 0.00 0.00 2.83
7203 11287 5.682862 GCATGCAGATTTAATCCGTACAAAG 59.317 40.000 14.21 0.00 0.00 2.77
7204 11288 6.458206 GCATGCAGATTTAATCCGTACAAAGA 60.458 38.462 14.21 0.00 0.00 2.52
7205 11289 7.471721 CATGCAGATTTAATCCGTACAAAGAA 58.528 34.615 0.78 0.00 0.00 2.52
7206 11290 7.441890 TGCAGATTTAATCCGTACAAAGAAA 57.558 32.000 0.78 0.00 0.00 2.52
7207 11291 7.302524 TGCAGATTTAATCCGTACAAAGAAAC 58.697 34.615 0.78 0.00 0.00 2.78
7208 11292 6.464834 GCAGATTTAATCCGTACAAAGAAACG 59.535 38.462 0.78 0.00 38.80 3.60
7209 11293 7.622672 GCAGATTTAATCCGTACAAAGAAACGA 60.623 37.037 0.78 0.00 41.55 3.85
7210 11294 7.898309 CAGATTTAATCCGTACAAAGAAACGAG 59.102 37.037 0.78 0.00 41.55 4.18
7211 11295 5.520022 TTAATCCGTACAAAGAAACGAGC 57.480 39.130 0.00 0.00 41.55 5.03
7212 11296 2.512485 TCCGTACAAAGAAACGAGCA 57.488 45.000 0.00 0.00 41.55 4.26
7213 11297 2.823984 TCCGTACAAAGAAACGAGCAA 58.176 42.857 0.00 0.00 41.55 3.91
7214 11298 2.798283 TCCGTACAAAGAAACGAGCAAG 59.202 45.455 0.00 0.00 41.55 4.01
7215 11299 2.542595 CCGTACAAAGAAACGAGCAAGT 59.457 45.455 0.00 0.00 41.55 3.16
7216 11300 3.531982 CGTACAAAGAAACGAGCAAGTG 58.468 45.455 0.00 0.00 41.55 3.16
7217 11301 3.244345 CGTACAAAGAAACGAGCAAGTGA 59.756 43.478 0.00 0.00 41.55 3.41
7218 11302 4.084537 CGTACAAAGAAACGAGCAAGTGAT 60.085 41.667 0.00 0.00 41.55 3.06
7219 11303 4.474226 ACAAAGAAACGAGCAAGTGATC 57.526 40.909 0.00 0.00 0.00 2.92
7220 11304 3.876914 ACAAAGAAACGAGCAAGTGATCA 59.123 39.130 0.00 0.00 0.00 2.92
7221 11305 4.516698 ACAAAGAAACGAGCAAGTGATCAT 59.483 37.500 0.00 0.00 0.00 2.45
7222 11306 4.675190 AAGAAACGAGCAAGTGATCATG 57.325 40.909 0.00 0.00 0.00 3.07
7223 11307 2.417933 AGAAACGAGCAAGTGATCATGC 59.582 45.455 12.47 12.47 42.87 4.06
7224 11308 1.812235 AACGAGCAAGTGATCATGCA 58.188 45.000 20.45 0.00 44.95 3.96
7225 11309 2.034104 ACGAGCAAGTGATCATGCAT 57.966 45.000 20.45 8.10 44.95 3.96
7226 11310 2.362736 ACGAGCAAGTGATCATGCATT 58.637 42.857 20.45 3.80 44.95 3.56
7227 11311 2.751259 ACGAGCAAGTGATCATGCATTT 59.249 40.909 20.45 3.14 44.95 2.32
7228 11312 3.940852 ACGAGCAAGTGATCATGCATTTA 59.059 39.130 20.45 0.00 44.95 1.40
7229 11313 4.577693 ACGAGCAAGTGATCATGCATTTAT 59.422 37.500 20.45 2.48 44.95 1.40
7230 11314 5.066893 ACGAGCAAGTGATCATGCATTTATT 59.933 36.000 20.45 1.83 44.95 1.40
7231 11315 5.624081 CGAGCAAGTGATCATGCATTTATTC 59.376 40.000 20.45 9.17 44.95 1.75
7232 11316 6.459670 AGCAAGTGATCATGCATTTATTCA 57.540 33.333 20.45 0.00 44.95 2.57
7233 11317 7.050970 AGCAAGTGATCATGCATTTATTCAT 57.949 32.000 20.45 0.00 44.95 2.57
7234 11318 6.923508 AGCAAGTGATCATGCATTTATTCATG 59.076 34.615 20.45 0.00 44.95 3.07
7235 11319 6.700081 GCAAGTGATCATGCATTTATTCATGT 59.300 34.615 14.95 0.00 42.12 3.21
7236 11320 7.096189 GCAAGTGATCATGCATTTATTCATGTC 60.096 37.037 14.95 2.04 42.12 3.06
7237 11321 7.576861 AGTGATCATGCATTTATTCATGTCA 57.423 32.000 0.00 4.01 40.54 3.58
7238 11322 8.178313 AGTGATCATGCATTTATTCATGTCAT 57.822 30.769 0.00 0.00 40.54 3.06
7239 11323 8.082242 AGTGATCATGCATTTATTCATGTCATG 58.918 33.333 6.47 6.47 40.54 3.07
7240 11324 7.865889 GTGATCATGCATTTATTCATGTCATGT 59.134 33.333 12.54 0.00 40.54 3.21
7241 11325 8.417884 TGATCATGCATTTATTCATGTCATGTT 58.582 29.630 12.54 4.77 40.54 2.71
7242 11326 8.812147 ATCATGCATTTATTCATGTCATGTTC 57.188 30.769 12.54 0.00 40.54 3.18
7243 11327 6.913673 TCATGCATTTATTCATGTCATGTTCG 59.086 34.615 12.54 0.00 40.54 3.95
7244 11328 5.580661 TGCATTTATTCATGTCATGTTCGG 58.419 37.500 12.54 0.00 0.00 4.30
7245 11329 4.977963 GCATTTATTCATGTCATGTTCGGG 59.022 41.667 12.54 0.27 0.00 5.14
7246 11330 5.221028 GCATTTATTCATGTCATGTTCGGGA 60.221 40.000 12.54 0.00 0.00 5.14
7247 11331 6.515531 GCATTTATTCATGTCATGTTCGGGAT 60.516 38.462 12.54 0.00 0.00 3.85
7248 11332 6.375945 TTTATTCATGTCATGTTCGGGATG 57.624 37.500 12.54 0.00 0.00 3.51
7249 11333 3.625649 TTCATGTCATGTTCGGGATGA 57.374 42.857 12.54 0.00 0.00 2.92
7250 11334 3.183793 TCATGTCATGTTCGGGATGAG 57.816 47.619 12.54 0.00 30.39 2.90
7251 11335 2.158914 TCATGTCATGTTCGGGATGAGG 60.159 50.000 12.54 0.00 30.39 3.86
7252 11336 1.275666 TGTCATGTTCGGGATGAGGT 58.724 50.000 0.00 0.00 30.39 3.85
7253 11337 1.066215 TGTCATGTTCGGGATGAGGTG 60.066 52.381 0.00 0.00 30.39 4.00
7254 11338 1.066143 GTCATGTTCGGGATGAGGTGT 60.066 52.381 0.00 0.00 30.39 4.16
7255 11339 1.628340 TCATGTTCGGGATGAGGTGTT 59.372 47.619 0.00 0.00 0.00 3.32
7256 11340 2.039746 TCATGTTCGGGATGAGGTGTTT 59.960 45.455 0.00 0.00 0.00 2.83
7257 11341 2.649531 TGTTCGGGATGAGGTGTTTT 57.350 45.000 0.00 0.00 0.00 2.43
7258 11342 2.938838 TGTTCGGGATGAGGTGTTTTT 58.061 42.857 0.00 0.00 0.00 1.94
7259 11343 4.088056 TGTTCGGGATGAGGTGTTTTTA 57.912 40.909 0.00 0.00 0.00 1.52
7260 11344 3.816523 TGTTCGGGATGAGGTGTTTTTAC 59.183 43.478 0.00 0.00 0.00 2.01
7261 11345 2.690786 TCGGGATGAGGTGTTTTTACG 58.309 47.619 0.00 0.00 0.00 3.18
7262 11346 1.735571 CGGGATGAGGTGTTTTTACGG 59.264 52.381 0.00 0.00 0.00 4.02
7263 11347 2.089201 GGGATGAGGTGTTTTTACGGG 58.911 52.381 0.00 0.00 0.00 5.28
7264 11348 2.553685 GGGATGAGGTGTTTTTACGGGT 60.554 50.000 0.00 0.00 0.00 5.28
7265 11349 2.486592 GGATGAGGTGTTTTTACGGGTG 59.513 50.000 0.00 0.00 0.00 4.61
7266 11350 3.404899 GATGAGGTGTTTTTACGGGTGA 58.595 45.455 0.00 0.00 0.00 4.02
7267 11351 2.841215 TGAGGTGTTTTTACGGGTGAG 58.159 47.619 0.00 0.00 0.00 3.51
7268 11352 2.171027 TGAGGTGTTTTTACGGGTGAGT 59.829 45.455 0.00 0.00 0.00 3.41
7269 11353 3.387374 TGAGGTGTTTTTACGGGTGAGTA 59.613 43.478 0.00 0.00 0.00 2.59
7270 11354 4.141756 TGAGGTGTTTTTACGGGTGAGTAA 60.142 41.667 0.00 0.00 35.07 2.24
7271 11355 4.779696 AGGTGTTTTTACGGGTGAGTAAA 58.220 39.130 0.00 0.00 42.68 2.01
7272 11356 4.818005 AGGTGTTTTTACGGGTGAGTAAAG 59.182 41.667 3.13 0.00 44.33 1.85
7273 11357 4.815846 GGTGTTTTTACGGGTGAGTAAAGA 59.184 41.667 3.13 0.00 44.33 2.52
7274 11358 5.296531 GGTGTTTTTACGGGTGAGTAAAGAA 59.703 40.000 3.13 0.29 44.33 2.52
7275 11359 6.183360 GGTGTTTTTACGGGTGAGTAAAGAAA 60.183 38.462 3.13 0.00 44.33 2.52
7276 11360 7.249858 GTGTTTTTACGGGTGAGTAAAGAAAA 58.750 34.615 3.13 0.00 44.33 2.29
7277 11361 7.754475 GTGTTTTTACGGGTGAGTAAAGAAAAA 59.246 33.333 3.13 0.00 44.33 1.94
7278 11362 7.754475 TGTTTTTACGGGTGAGTAAAGAAAAAC 59.246 33.333 10.96 10.96 44.33 2.43
7279 11363 5.655893 TTACGGGTGAGTAAAGAAAAACG 57.344 39.130 0.00 0.00 34.08 3.60
7280 11364 3.795877 ACGGGTGAGTAAAGAAAAACGA 58.204 40.909 0.00 0.00 0.00 3.85
7281 11365 3.557185 ACGGGTGAGTAAAGAAAAACGAC 59.443 43.478 0.00 0.00 0.00 4.34
7282 11366 3.556775 CGGGTGAGTAAAGAAAAACGACA 59.443 43.478 0.00 0.00 0.00 4.35
7283 11367 4.034279 CGGGTGAGTAAAGAAAAACGACAA 59.966 41.667 0.00 0.00 0.00 3.18
7284 11368 5.447548 CGGGTGAGTAAAGAAAAACGACAAA 60.448 40.000 0.00 0.00 0.00 2.83
7285 11369 6.324042 GGGTGAGTAAAGAAAAACGACAAAA 58.676 36.000 0.00 0.00 0.00 2.44
7286 11370 6.807720 GGGTGAGTAAAGAAAAACGACAAAAA 59.192 34.615 0.00 0.00 0.00 1.94
7287 11371 7.201376 GGGTGAGTAAAGAAAAACGACAAAAAC 60.201 37.037 0.00 0.00 0.00 2.43
7288 11372 7.326547 GGTGAGTAAAGAAAAACGACAAAAACA 59.673 33.333 0.00 0.00 0.00 2.83
7289 11373 8.692615 GTGAGTAAAGAAAAACGACAAAAACAA 58.307 29.630 0.00 0.00 0.00 2.83
7290 11374 9.245962 TGAGTAAAGAAAAACGACAAAAACAAA 57.754 25.926 0.00 0.00 0.00 2.83
7291 11375 9.507233 GAGTAAAGAAAAACGACAAAAACAAAC 57.493 29.630 0.00 0.00 0.00 2.93
7292 11376 8.209214 AGTAAAGAAAAACGACAAAAACAAACG 58.791 29.630 0.00 0.00 0.00 3.60
7293 11377 6.750775 AAGAAAAACGACAAAAACAAACGA 57.249 29.167 0.00 0.00 0.00 3.85
7294 11378 6.937886 AGAAAAACGACAAAAACAAACGAT 57.062 29.167 0.00 0.00 0.00 3.73
7295 11379 6.974033 AGAAAAACGACAAAAACAAACGATC 58.026 32.000 0.00 0.00 0.00 3.69
7296 11380 6.804783 AGAAAAACGACAAAAACAAACGATCT 59.195 30.769 0.00 0.00 0.00 2.75
7297 11381 6.937886 AAAACGACAAAAACAAACGATCTT 57.062 29.167 0.00 0.00 0.00 2.40
7298 11382 8.450385 AAAAACGACAAAAACAAACGATCTTA 57.550 26.923 0.00 0.00 0.00 2.10
7299 11383 8.623310 AAAACGACAAAAACAAACGATCTTAT 57.377 26.923 0.00 0.00 0.00 1.73
7300 11384 7.603297 AACGACAAAAACAAACGATCTTATG 57.397 32.000 0.00 0.00 0.00 1.90
7301 11385 6.140110 ACGACAAAAACAAACGATCTTATGG 58.860 36.000 0.00 0.00 0.00 2.74
7302 11386 6.140110 CGACAAAAACAAACGATCTTATGGT 58.860 36.000 0.00 0.00 0.00 3.55
7303 11387 6.086241 CGACAAAAACAAACGATCTTATGGTG 59.914 38.462 0.00 0.00 0.00 4.17
7304 11388 5.689961 ACAAAAACAAACGATCTTATGGTGC 59.310 36.000 0.00 0.00 0.00 5.01
7305 11389 3.740044 AACAAACGATCTTATGGTGCG 57.260 42.857 0.00 0.00 0.00 5.34
7306 11390 1.396996 ACAAACGATCTTATGGTGCGC 59.603 47.619 0.00 0.00 0.00 6.09
7307 11391 1.396648 CAAACGATCTTATGGTGCGCA 59.603 47.619 5.66 5.66 0.00 6.09
7308 11392 1.953559 AACGATCTTATGGTGCGCAT 58.046 45.000 15.91 0.00 0.00 4.73
7309 11393 1.502231 ACGATCTTATGGTGCGCATC 58.498 50.000 15.91 15.63 0.00 3.91
7310 11394 0.436150 CGATCTTATGGTGCGCATCG 59.564 55.000 15.91 12.82 0.00 3.84
7311 11395 1.502231 GATCTTATGGTGCGCATCGT 58.498 50.000 20.90 20.90 0.00 3.73
7312 11396 1.457303 GATCTTATGGTGCGCATCGTC 59.543 52.381 20.71 2.23 0.00 4.20
7313 11397 0.529773 TCTTATGGTGCGCATCGTCC 60.530 55.000 20.71 13.64 0.00 4.79
7314 11398 0.809636 CTTATGGTGCGCATCGTCCA 60.810 55.000 20.71 19.47 37.38 4.02
7315 11399 0.391793 TTATGGTGCGCATCGTCCAA 60.392 50.000 20.71 6.29 36.86 3.53
7316 11400 1.087202 TATGGTGCGCATCGTCCAAC 61.087 55.000 20.71 0.00 36.86 3.77
7317 11401 3.047280 GGTGCGCATCGTCCAACA 61.047 61.111 15.91 0.00 0.00 3.33
7318 11402 2.476051 GTGCGCATCGTCCAACAG 59.524 61.111 15.91 0.00 0.00 3.16
7319 11403 2.741985 TGCGCATCGTCCAACAGG 60.742 61.111 5.66 0.00 0.00 4.00
7320 11404 4.166011 GCGCATCGTCCAACAGGC 62.166 66.667 0.30 0.00 0.00 4.85
7321 11405 3.499737 CGCATCGTCCAACAGGCC 61.500 66.667 0.00 0.00 0.00 5.19
7322 11406 3.499737 GCATCGTCCAACAGGCCG 61.500 66.667 0.00 0.00 0.00 6.13
7323 11407 2.264480 CATCGTCCAACAGGCCGA 59.736 61.111 0.00 0.00 0.00 5.54
7324 11408 2.100631 CATCGTCCAACAGGCCGAC 61.101 63.158 0.00 0.00 31.43 4.79
7325 11409 3.310860 ATCGTCCAACAGGCCGACC 62.311 63.158 0.00 0.00 31.43 4.79
7327 11411 4.717313 GTCCAACAGGCCGACCCC 62.717 72.222 0.00 0.00 36.11 4.95
7329 11413 4.047125 CCAACAGGCCGACCCCAT 62.047 66.667 0.00 0.00 36.11 4.00
7330 11414 2.035626 CAACAGGCCGACCCCATT 59.964 61.111 0.00 0.00 36.11 3.16
7331 11415 1.606313 CAACAGGCCGACCCCATTT 60.606 57.895 0.00 0.00 36.11 2.32
7332 11416 1.304134 AACAGGCCGACCCCATTTC 60.304 57.895 0.00 0.00 36.11 2.17
7333 11417 2.075355 AACAGGCCGACCCCATTTCA 62.075 55.000 0.00 0.00 36.11 2.69
7334 11418 1.750399 CAGGCCGACCCCATTTCAG 60.750 63.158 0.00 0.00 36.11 3.02
7335 11419 2.440247 GGCCGACCCCATTTCAGG 60.440 66.667 0.00 0.00 0.00 3.86
7336 11420 3.140814 GCCGACCCCATTTCAGGC 61.141 66.667 0.00 0.00 37.61 4.85
7337 11421 2.824041 CCGACCCCATTTCAGGCG 60.824 66.667 0.00 0.00 0.00 5.52
7338 11422 2.824041 CGACCCCATTTCAGGCGG 60.824 66.667 0.00 0.00 0.00 6.13
7339 11423 3.140814 GACCCCATTTCAGGCGGC 61.141 66.667 0.00 0.00 0.00 6.53
7342 11426 4.794648 CCCATTTCAGGCGGCGGA 62.795 66.667 9.78 7.93 0.00 5.54
7343 11427 3.204827 CCATTTCAGGCGGCGGAG 61.205 66.667 12.16 2.26 0.00 4.63
7344 11428 2.125147 CATTTCAGGCGGCGGAGA 60.125 61.111 12.16 8.45 0.00 3.71
7345 11429 1.745115 CATTTCAGGCGGCGGAGAA 60.745 57.895 12.16 10.78 0.00 2.87
7346 11430 1.745489 ATTTCAGGCGGCGGAGAAC 60.745 57.895 12.16 0.00 0.00 3.01
7357 11441 4.094684 GGAGAACGATGCGGACTG 57.905 61.111 0.00 0.00 0.00 3.51
7358 11442 2.167861 GGAGAACGATGCGGACTGC 61.168 63.158 0.00 0.00 46.70 4.40
7368 11452 4.421479 CGGACTGCGGCTCGTCTT 62.421 66.667 17.76 0.00 0.00 3.01
7369 11453 2.811317 GGACTGCGGCTCGTCTTG 60.811 66.667 17.76 0.00 0.00 3.02
7370 11454 2.258591 GACTGCGGCTCGTCTTGA 59.741 61.111 13.26 0.00 0.00 3.02
7371 11455 1.153745 GACTGCGGCTCGTCTTGAT 60.154 57.895 13.26 0.00 0.00 2.57
7372 11456 1.416813 GACTGCGGCTCGTCTTGATG 61.417 60.000 13.26 0.00 0.00 3.07
7373 11457 1.446792 CTGCGGCTCGTCTTGATGT 60.447 57.895 0.00 0.00 0.00 3.06
7374 11458 1.690283 CTGCGGCTCGTCTTGATGTG 61.690 60.000 0.00 0.00 0.00 3.21
7375 11459 2.456119 GCGGCTCGTCTTGATGTGG 61.456 63.158 0.00 0.00 0.00 4.17
7376 11460 2.456119 CGGCTCGTCTTGATGTGGC 61.456 63.158 7.95 7.95 0.00 5.01
7377 11461 2.109126 GGCTCGTCTTGATGTGGCC 61.109 63.158 0.00 0.00 0.00 5.36
7378 11462 1.375908 GCTCGTCTTGATGTGGCCA 60.376 57.895 0.00 0.00 0.00 5.36
7379 11463 1.364626 GCTCGTCTTGATGTGGCCAG 61.365 60.000 5.11 0.00 0.00 4.85
7380 11464 0.247460 CTCGTCTTGATGTGGCCAGA 59.753 55.000 5.11 4.74 0.00 3.86
7381 11465 0.684535 TCGTCTTGATGTGGCCAGAA 59.315 50.000 5.11 0.00 0.00 3.02
7382 11466 0.798776 CGTCTTGATGTGGCCAGAAC 59.201 55.000 5.11 3.76 0.00 3.01
7383 11467 1.609061 CGTCTTGATGTGGCCAGAACT 60.609 52.381 5.11 0.00 0.00 3.01
7384 11468 2.079925 GTCTTGATGTGGCCAGAACTC 58.920 52.381 5.11 0.00 0.00 3.01
7385 11469 1.081892 CTTGATGTGGCCAGAACTCG 58.918 55.000 5.11 0.00 0.00 4.18
7386 11470 0.321564 TTGATGTGGCCAGAACTCGG 60.322 55.000 5.11 0.00 0.00 4.63
7392 11476 4.143333 GCCAGAACTCGGCGCCTA 62.143 66.667 26.68 13.77 40.35 3.93
7393 11477 2.202756 CCAGAACTCGGCGCCTAC 60.203 66.667 26.68 10.75 0.00 3.18
7394 11478 2.571757 CAGAACTCGGCGCCTACA 59.428 61.111 26.68 7.19 0.00 2.74
7395 11479 1.517257 CAGAACTCGGCGCCTACAG 60.517 63.158 26.68 19.23 0.00 2.74
7396 11480 2.202756 GAACTCGGCGCCTACAGG 60.203 66.667 26.68 8.63 38.53 4.00
7397 11481 3.718210 GAACTCGGCGCCTACAGGG 62.718 68.421 26.68 11.59 35.18 4.45
7398 11482 4.753662 ACTCGGCGCCTACAGGGA 62.754 66.667 26.68 12.25 37.23 4.20
7399 11483 3.905678 CTCGGCGCCTACAGGGAG 61.906 72.222 26.68 18.21 37.23 4.30
7402 11486 3.541713 GGCGCCTACAGGGAGGAG 61.542 72.222 22.15 0.00 39.15 3.69
7404 11488 3.905678 CGCCTACAGGGAGGAGCG 61.906 72.222 0.47 0.00 39.15 5.03
7405 11489 2.442272 GCCTACAGGGAGGAGCGA 60.442 66.667 0.47 0.00 39.15 4.93
7406 11490 2.787567 GCCTACAGGGAGGAGCGAC 61.788 68.421 0.47 0.00 39.15 5.19
7407 11491 1.076632 CCTACAGGGAGGAGCGACT 60.077 63.158 0.00 0.00 39.15 4.18
7408 11492 1.104577 CCTACAGGGAGGAGCGACTC 61.105 65.000 0.00 2.50 39.15 3.36
7409 11493 0.394488 CTACAGGGAGGAGCGACTCA 60.394 60.000 11.85 0.00 39.27 3.41
7410 11494 0.039180 TACAGGGAGGAGCGACTCAA 59.961 55.000 11.85 0.00 39.27 3.02
7411 11495 1.216710 CAGGGAGGAGCGACTCAAC 59.783 63.158 11.85 5.19 39.27 3.18
7412 11496 1.228894 AGGGAGGAGCGACTCAACA 60.229 57.895 11.85 0.00 39.27 3.33
7413 11497 0.832135 AGGGAGGAGCGACTCAACAA 60.832 55.000 11.85 0.00 39.27 2.83
7414 11498 0.034896 GGGAGGAGCGACTCAACAAA 59.965 55.000 11.85 0.00 39.27 2.83
7415 11499 1.433534 GGAGGAGCGACTCAACAAAG 58.566 55.000 11.85 0.00 39.27 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 165 2.064581 ATACCACACCTCCGCTCCC 61.065 63.158 0.00 0.00 0.00 4.30
224 236 1.278985 CACATCCTGTCACTTGGCCTA 59.721 52.381 3.32 0.00 0.00 3.93
245 257 1.064296 ACTCTAGCGTCCGCATTCG 59.936 57.895 14.70 2.35 44.88 3.34
258 270 0.895530 CTGCCGAGAAACCCACTCTA 59.104 55.000 0.00 0.00 32.87 2.43
279 291 2.095969 TGACGGCATTAAAGAAAGCACG 60.096 45.455 0.00 0.00 0.00 5.34
307 319 0.693622 TCAAATAGGTTGCCCGTCCA 59.306 50.000 0.00 0.00 37.13 4.02
415 428 0.593128 CCAAGCAAAACCCTCTCACG 59.407 55.000 0.00 0.00 0.00 4.35
417 430 0.850100 TCCCAAGCAAAACCCTCTCA 59.150 50.000 0.00 0.00 0.00 3.27
478 491 2.916527 ATCAGCGGGATGGGGCTTTG 62.917 60.000 0.00 0.00 37.41 2.77
558 572 0.393077 CCTAATCAAGCGGTCCGGAT 59.607 55.000 14.38 4.49 0.00 4.18
574 588 0.396139 AACCGCCTGTATCCGTCCTA 60.396 55.000 0.00 0.00 0.00 2.94
622 636 8.166422 TCTTAAACTTTCTTTCAAGCCTAAGG 57.834 34.615 0.00 0.00 29.80 2.69
632 646 7.993821 AAGCAGCTTTCTTAAACTTTCTTTC 57.006 32.000 0.21 0.00 0.00 2.62
733 748 6.571520 CGTGCTTTATCTGCTTTTATCGATTC 59.428 38.462 1.71 0.00 0.00 2.52
740 755 4.757799 TTGCGTGCTTTATCTGCTTTTA 57.242 36.364 0.00 0.00 0.00 1.52
931 952 0.813184 CAGGCATTGTGCTAGTTGGG 59.187 55.000 1.64 0.00 44.28 4.12
932 953 1.741706 CTCAGGCATTGTGCTAGTTGG 59.258 52.381 1.64 0.00 44.28 3.77
934 955 1.457346 GCTCAGGCATTGTGCTAGTT 58.543 50.000 1.64 0.00 44.28 2.24
935 956 0.393537 GGCTCAGGCATTGTGCTAGT 60.394 55.000 12.29 0.00 44.28 2.57
936 957 1.099879 GGGCTCAGGCATTGTGCTAG 61.100 60.000 0.00 0.00 44.28 3.42
937 958 1.077501 GGGCTCAGGCATTGTGCTA 60.078 57.895 0.00 0.00 44.28 3.49
1062 1134 2.125912 CGTCCGTCCAAGGCAGAG 60.126 66.667 0.00 0.00 0.00 3.35
1114 1186 1.215647 GACCTCTGCGGACGAACAT 59.784 57.895 0.00 0.00 36.31 2.71
1495 1600 8.816144 CGTTCAATTTCATCAAAAGGAAAAGAA 58.184 29.630 0.00 0.00 38.54 2.52
1507 1612 4.388773 CCGAGACTTCGTTCAATTTCATCA 59.611 41.667 0.00 0.00 45.28 3.07
1508 1613 4.389077 ACCGAGACTTCGTTCAATTTCATC 59.611 41.667 0.00 0.00 45.28 2.92
1509 1614 4.152402 CACCGAGACTTCGTTCAATTTCAT 59.848 41.667 0.00 0.00 45.28 2.57
1553 1658 4.022603 AGCTGATCTTCTTGTAGAGCTCA 58.977 43.478 17.77 0.00 31.94 4.26
1583 1688 1.512996 GGATGAGCCCGTCGTCGATA 61.513 60.000 2.98 0.00 41.62 2.92
1727 1836 2.450609 TAGAACACGGCTTGAGGTTC 57.549 50.000 0.00 0.00 39.83 3.62
1759 1874 0.771127 AGCCTACAAGCAGAACCCAA 59.229 50.000 0.00 0.00 34.23 4.12
1789 1904 2.035449 GCGGCCAATAAAACCTATTCCC 59.965 50.000 2.24 0.00 0.00 3.97
1836 1951 7.210873 ACCAAATACTCCTAAACGATCATCTC 58.789 38.462 0.00 0.00 0.00 2.75
1899 2018 0.670162 AAGTTGCACATCACACTGGC 59.330 50.000 0.00 0.00 0.00 4.85
1921 2040 3.926527 GCACAACACTTCGTGATCAGATA 59.073 43.478 0.00 0.00 36.96 1.98
1941 2060 1.276705 TGGATACGTTAGCAGTTGGCA 59.723 47.619 0.00 0.00 43.77 4.92
1986 2148 7.938563 TGTGCTGTCAAACCAATTTTATAAC 57.061 32.000 0.00 0.00 0.00 1.89
2056 2230 3.760684 AGATGCAGGCTTTAAGGTTGAAG 59.239 43.478 0.00 0.00 0.00 3.02
2096 2275 2.814336 GGGATGACACAAGAAGGAACAC 59.186 50.000 0.00 0.00 0.00 3.32
2145 2324 4.982916 CCACTTATACGCACTCCATACTTC 59.017 45.833 0.00 0.00 0.00 3.01
2159 2338 5.538053 GGAACCCTAGTCCTACCACTTATAC 59.462 48.000 0.00 0.00 0.00 1.47
2162 2341 3.599698 AGGAACCCTAGTCCTACCACTTA 59.400 47.826 0.00 0.00 31.06 2.24
2163 2342 2.386113 AGGAACCCTAGTCCTACCACTT 59.614 50.000 0.00 0.00 31.06 3.16
2286 2468 2.836360 TCTAACCCTAGCCGCCGG 60.836 66.667 0.00 0.00 0.00 6.13
2447 2656 8.418597 AGCCCACGAGTTATCTTAGATTAATA 57.581 34.615 0.00 0.00 0.00 0.98
2453 2663 5.443283 TCTTAGCCCACGAGTTATCTTAGA 58.557 41.667 0.00 0.00 0.00 2.10
2569 2788 1.839424 TGATCAGCTCGAGGAGTTCA 58.161 50.000 15.58 2.98 31.39 3.18
2582 2801 1.872952 TGTTTGACGCTGGTTGATCAG 59.127 47.619 0.00 0.00 37.79 2.90
2583 2802 1.601903 GTGTTTGACGCTGGTTGATCA 59.398 47.619 0.00 0.00 0.00 2.92
3425 3681 1.380112 GGAGTACTCCGACCAGGCT 60.380 63.158 25.83 0.00 40.36 4.58
3504 3760 2.181021 GGTCTACACCACGGCTCG 59.819 66.667 0.00 0.00 43.17 5.03
3542 3798 4.641645 CCACTTCCAGCGTGGGCA 62.642 66.667 1.34 0.00 46.38 5.36
3706 3962 2.822764 CGAGCCCTCTGTGGTATTTAC 58.177 52.381 0.00 0.00 0.00 2.01
3707 3963 1.138266 GCGAGCCCTCTGTGGTATTTA 59.862 52.381 0.00 0.00 0.00 1.40
3708 3964 0.107654 GCGAGCCCTCTGTGGTATTT 60.108 55.000 0.00 0.00 0.00 1.40
3709 3965 1.522569 GCGAGCCCTCTGTGGTATT 59.477 57.895 0.00 0.00 0.00 1.89
3710 3966 2.786495 CGCGAGCCCTCTGTGGTAT 61.786 63.158 0.00 0.00 0.00 2.73
3711 3967 3.449227 CGCGAGCCCTCTGTGGTA 61.449 66.667 0.00 0.00 0.00 3.25
3756 4012 3.112709 GCTGCTGACGTTCCCGAC 61.113 66.667 0.00 0.00 37.88 4.79
3757 4013 4.717629 CGCTGCTGACGTTCCCGA 62.718 66.667 0.00 0.00 37.88 5.14
3761 4017 3.782244 CTGCCGCTGCTGACGTTC 61.782 66.667 0.70 0.00 38.61 3.95
3798 4054 4.742201 TCTGCAGCCGCCGTTCTC 62.742 66.667 9.47 0.00 37.32 2.87
3799 4055 4.749310 CTCTGCAGCCGCCGTTCT 62.749 66.667 9.47 0.00 37.32 3.01
4562 8296 1.067250 GCCAGCTCCATCGACTCTC 59.933 63.158 0.00 0.00 0.00 3.20
4563 8297 2.780094 CGCCAGCTCCATCGACTCT 61.780 63.158 0.00 0.00 0.00 3.24
4736 8485 1.295423 CCGGGTTTCGACCATGTCT 59.705 57.895 0.00 0.00 42.43 3.41
4785 8534 0.924823 AGGAGTAGAGCCGGTAGGAA 59.075 55.000 1.90 0.00 41.02 3.36
4795 8544 6.075984 TGCCCTTATAACCTAAGGAGTAGAG 58.924 44.000 11.70 0.00 45.24 2.43
4796 8545 6.034442 TGCCCTTATAACCTAAGGAGTAGA 57.966 41.667 11.70 0.00 45.24 2.59
4799 8548 4.892198 TCTGCCCTTATAACCTAAGGAGT 58.108 43.478 11.70 0.00 45.24 3.85
4804 8553 4.682320 CGCTGTTCTGCCCTTATAACCTAA 60.682 45.833 0.00 0.00 0.00 2.69
4811 8560 0.179000 CTCCGCTGTTCTGCCCTTAT 59.821 55.000 0.00 0.00 0.00 1.73
4814 8563 1.557269 AATCTCCGCTGTTCTGCCCT 61.557 55.000 0.00 0.00 0.00 5.19
4818 8567 1.649664 CCTCAATCTCCGCTGTTCTG 58.350 55.000 0.00 0.00 0.00 3.02
4821 8570 1.078143 GCCCTCAATCTCCGCTGTT 60.078 57.895 0.00 0.00 0.00 3.16
4823 8572 2.587194 CGCCCTCAATCTCCGCTG 60.587 66.667 0.00 0.00 0.00 5.18
4824 8573 2.759973 TCGCCCTCAATCTCCGCT 60.760 61.111 0.00 0.00 0.00 5.52
4826 8575 2.127869 TCCTCGCCCTCAATCTCCG 61.128 63.158 0.00 0.00 0.00 4.63
4875 8624 3.483869 GCCGCCATCCTCCTTCCT 61.484 66.667 0.00 0.00 0.00 3.36
5042 8813 7.676683 ATCTTAGCCCACAAGTTATCTTAGA 57.323 36.000 0.00 0.00 32.07 2.10
5132 8912 5.809562 CACACCAGTCAAGTAAATGCAAAAA 59.190 36.000 0.00 0.00 0.00 1.94
5204 9220 5.196341 ACTCACGATGTTCTTAAGACACA 57.804 39.130 17.19 17.19 0.00 3.72
5208 9224 8.248253 TGCTTATTACTCACGATGTTCTTAAGA 58.752 33.333 0.00 0.00 0.00 2.10
5399 9430 9.638239 TTCGCAGCATTTAAAGATAGAAAAATT 57.362 25.926 0.00 0.00 0.00 1.82
5487 9519 7.364522 TGTGTGTTCTATTTCTAGCAACATC 57.635 36.000 0.00 0.00 32.60 3.06
5503 9536 5.294552 AGAGAACAACTTTAGCTGTGTGTTC 59.705 40.000 16.45 16.45 35.87 3.18
5708 9744 7.094205 ACTGAAAAAGAAAACAGAAAGAGAGCA 60.094 33.333 0.00 0.00 34.88 4.26
5838 9874 3.281727 TGCCGAGGATCAGCTTAAAAT 57.718 42.857 0.00 0.00 39.83 1.82
6271 10308 9.418045 GACAAGAAATCTCTGGATAGCTATAAC 57.582 37.037 6.13 3.59 30.03 1.89
6417 10461 3.996032 GTCATGAACGAATCTTGCACTC 58.004 45.455 0.00 0.00 34.14 3.51
6432 10476 0.948623 CCAACTTGTCGCCGTCATGA 60.949 55.000 4.44 0.00 0.00 3.07
6463 10507 3.758755 TCAACAAGACAGCTGACAGAT 57.241 42.857 23.35 0.00 0.00 2.90
6474 10518 4.941873 AGGAAACCCGATATTCAACAAGAC 59.058 41.667 0.00 0.00 0.00 3.01
6509 10553 7.786046 TTTCTTCACTAGGTGGTTATGAGTA 57.214 36.000 0.00 0.00 33.87 2.59
6525 10569 3.057596 TCACCGATGGCAATTTTCTTCAC 60.058 43.478 0.00 0.00 0.00 3.18
6628 10682 6.660521 TGAAAATACCAGTTTGAGCTCATGAT 59.339 34.615 19.04 2.02 0.00 2.45
6683 10737 3.243724 ACAGTTTACCCTGAGCTTCTCT 58.756 45.455 0.00 0.00 36.30 3.10
6696 10750 5.347907 GCCCGAGCATATATGTACAGTTTAC 59.652 44.000 14.14 0.00 39.53 2.01
6697 10751 5.245301 AGCCCGAGCATATATGTACAGTTTA 59.755 40.000 14.14 0.00 43.56 2.01
6698 10752 4.040461 AGCCCGAGCATATATGTACAGTTT 59.960 41.667 14.14 0.00 43.56 2.66
6718 10772 3.440522 GTCTGAATTCCCTTGTACAAGCC 59.559 47.826 27.05 12.67 37.11 4.35
6746 10800 4.335647 CTGGCTGGCACTTCCGGT 62.336 66.667 0.00 0.00 43.46 5.28
6786 10840 3.119096 GCGGGAAGGCACTCGAAC 61.119 66.667 8.06 0.00 38.49 3.95
6838 10892 9.255304 GAAAAACAACAACCAAAGCTAATATGA 57.745 29.630 0.00 0.00 0.00 2.15
6839 10893 9.260002 AGAAAAACAACAACCAAAGCTAATATG 57.740 29.630 0.00 0.00 0.00 1.78
6840 10894 9.476202 GAGAAAAACAACAACCAAAGCTAATAT 57.524 29.630 0.00 0.00 0.00 1.28
6841 10895 8.691797 AGAGAAAAACAACAACCAAAGCTAATA 58.308 29.630 0.00 0.00 0.00 0.98
7001 11085 3.618019 CGGGCCTTTTTGCTAGTACTGTA 60.618 47.826 5.39 0.00 0.00 2.74
7002 11086 2.791655 GGGCCTTTTTGCTAGTACTGT 58.208 47.619 5.39 0.00 0.00 3.55
7003 11087 1.737793 CGGGCCTTTTTGCTAGTACTG 59.262 52.381 5.39 0.00 0.00 2.74
7004 11088 1.350019 ACGGGCCTTTTTGCTAGTACT 59.650 47.619 0.84 0.00 0.00 2.73
7005 11089 1.467342 CACGGGCCTTTTTGCTAGTAC 59.533 52.381 0.84 0.00 0.00 2.73
7006 11090 1.816074 CACGGGCCTTTTTGCTAGTA 58.184 50.000 0.84 0.00 0.00 1.82
7007 11091 1.524008 GCACGGGCCTTTTTGCTAGT 61.524 55.000 0.00 0.00 32.00 2.57
7008 11092 1.212751 GCACGGGCCTTTTTGCTAG 59.787 57.895 0.00 0.00 32.00 3.42
7009 11093 2.622011 CGCACGGGCCTTTTTGCTA 61.622 57.895 2.82 0.00 36.38 3.49
7010 11094 3.977244 CGCACGGGCCTTTTTGCT 61.977 61.111 2.82 0.00 36.38 3.91
7011 11095 3.783478 AACGCACGGGCCTTTTTGC 62.783 57.895 2.82 5.50 36.38 3.68
7012 11096 1.948635 CAACGCACGGGCCTTTTTG 60.949 57.895 2.82 0.00 36.38 2.44
7013 11097 2.415426 CAACGCACGGGCCTTTTT 59.585 55.556 2.82 0.00 36.38 1.94
7014 11098 4.279043 GCAACGCACGGGCCTTTT 62.279 61.111 2.82 0.00 36.38 2.27
7048 11132 9.656040 TCTTTTATAAATTAAGAGCGTGTGGTA 57.344 29.630 0.00 0.00 0.00 3.25
7049 11133 8.556213 TCTTTTATAAATTAAGAGCGTGTGGT 57.444 30.769 0.00 0.00 0.00 4.16
7050 11134 9.438291 CATCTTTTATAAATTAAGAGCGTGTGG 57.562 33.333 0.00 0.00 31.98 4.17
7051 11135 9.438291 CCATCTTTTATAAATTAAGAGCGTGTG 57.562 33.333 0.00 0.00 31.98 3.82
7052 11136 9.174166 ACCATCTTTTATAAATTAAGAGCGTGT 57.826 29.630 0.00 0.00 31.98 4.49
7053 11137 9.651718 GACCATCTTTTATAAATTAAGAGCGTG 57.348 33.333 0.00 0.00 31.98 5.34
7054 11138 9.614792 AGACCATCTTTTATAAATTAAGAGCGT 57.385 29.630 0.00 0.45 31.98 5.07
7074 11158 9.717942 GCTACAAATTCTCAGATTATAGACCAT 57.282 33.333 0.00 0.00 0.00 3.55
7075 11159 8.928448 AGCTACAAATTCTCAGATTATAGACCA 58.072 33.333 0.00 0.00 0.00 4.02
7081 11165 9.717942 GGTCATAGCTACAAATTCTCAGATTAT 57.282 33.333 0.00 0.00 0.00 1.28
7082 11166 8.150945 GGGTCATAGCTACAAATTCTCAGATTA 58.849 37.037 0.00 0.00 0.00 1.75
7083 11167 6.995091 GGGTCATAGCTACAAATTCTCAGATT 59.005 38.462 0.00 0.00 0.00 2.40
7084 11168 6.100279 TGGGTCATAGCTACAAATTCTCAGAT 59.900 38.462 0.00 0.00 0.00 2.90
7085 11169 5.425217 TGGGTCATAGCTACAAATTCTCAGA 59.575 40.000 0.00 0.00 0.00 3.27
7086 11170 5.674525 TGGGTCATAGCTACAAATTCTCAG 58.325 41.667 0.00 0.00 0.00 3.35
7087 11171 5.692115 TGGGTCATAGCTACAAATTCTCA 57.308 39.130 0.00 0.00 0.00 3.27
7088 11172 6.374333 TGTTTGGGTCATAGCTACAAATTCTC 59.626 38.462 9.02 0.00 34.11 2.87
7089 11173 6.245408 TGTTTGGGTCATAGCTACAAATTCT 58.755 36.000 9.02 0.00 34.11 2.40
7090 11174 6.509418 TGTTTGGGTCATAGCTACAAATTC 57.491 37.500 9.02 0.70 34.11 2.17
7091 11175 6.909550 TTGTTTGGGTCATAGCTACAAATT 57.090 33.333 9.02 0.00 34.11 1.82
7092 11176 6.909550 TTTGTTTGGGTCATAGCTACAAAT 57.090 33.333 9.02 0.00 34.11 2.32
7093 11177 6.716934 TTTTGTTTGGGTCATAGCTACAAA 57.283 33.333 0.00 0.00 33.65 2.83
7094 11178 6.716934 TTTTTGTTTGGGTCATAGCTACAA 57.283 33.333 0.00 0.00 0.00 2.41
7095 11179 6.295011 CCATTTTTGTTTGGGTCATAGCTACA 60.295 38.462 0.00 0.00 0.00 2.74
7096 11180 6.099341 CCATTTTTGTTTGGGTCATAGCTAC 58.901 40.000 0.00 0.00 0.00 3.58
7097 11181 5.777732 ACCATTTTTGTTTGGGTCATAGCTA 59.222 36.000 0.00 0.00 37.32 3.32
7098 11182 4.592778 ACCATTTTTGTTTGGGTCATAGCT 59.407 37.500 0.00 0.00 37.32 3.32
7099 11183 4.893608 ACCATTTTTGTTTGGGTCATAGC 58.106 39.130 0.00 0.00 37.32 2.97
7104 11188 6.578944 AGTTAAGACCATTTTTGTTTGGGTC 58.421 36.000 0.00 0.00 46.54 4.46
7105 11189 6.553953 AGTTAAGACCATTTTTGTTTGGGT 57.446 33.333 0.00 0.00 37.32 4.51
7116 11200 9.662947 ACTACGCTTTTATAAGTTAAGACCATT 57.337 29.630 0.48 0.00 33.74 3.16
7117 11201 9.662947 AACTACGCTTTTATAAGTTAAGACCAT 57.337 29.630 0.48 0.00 33.74 3.55
7118 11202 9.492973 AAACTACGCTTTTATAAGTTAAGACCA 57.507 29.630 0.48 0.00 33.74 4.02
7129 11213 8.810427 CGTGGAATCTTAAACTACGCTTTTATA 58.190 33.333 0.00 0.00 32.75 0.98
7130 11214 7.546667 TCGTGGAATCTTAAACTACGCTTTTAT 59.453 33.333 0.00 0.00 38.13 1.40
7131 11215 6.867816 TCGTGGAATCTTAAACTACGCTTTTA 59.132 34.615 0.00 0.00 38.13 1.52
7132 11216 5.697633 TCGTGGAATCTTAAACTACGCTTTT 59.302 36.000 0.00 0.00 38.13 2.27
7133 11217 5.232463 TCGTGGAATCTTAAACTACGCTTT 58.768 37.500 0.00 0.00 38.13 3.51
7134 11218 4.813027 TCGTGGAATCTTAAACTACGCTT 58.187 39.130 0.00 0.00 38.13 4.68
7135 11219 4.157289 TCTCGTGGAATCTTAAACTACGCT 59.843 41.667 0.00 0.00 38.13 5.07
7136 11220 4.418392 TCTCGTGGAATCTTAAACTACGC 58.582 43.478 0.00 0.00 38.13 4.42
7137 11221 5.638783 ACTCTCGTGGAATCTTAAACTACG 58.361 41.667 0.00 0.00 39.20 3.51
7138 11222 7.886405 AAACTCTCGTGGAATCTTAAACTAC 57.114 36.000 0.00 0.00 0.00 2.73
7140 11224 9.503399 AATAAAACTCTCGTGGAATCTTAAACT 57.497 29.630 0.00 0.00 0.00 2.66
7143 11227 9.496873 TGAAATAAAACTCTCGTGGAATCTTAA 57.503 29.630 0.00 0.00 0.00 1.85
7144 11228 9.496873 TTGAAATAAAACTCTCGTGGAATCTTA 57.503 29.630 0.00 0.00 0.00 2.10
7145 11229 7.979444 TGAAATAAAACTCTCGTGGAATCTT 57.021 32.000 0.00 0.00 0.00 2.40
7146 11230 7.444183 TGTTGAAATAAAACTCTCGTGGAATCT 59.556 33.333 0.00 0.00 0.00 2.40
7147 11231 7.581476 TGTTGAAATAAAACTCTCGTGGAATC 58.419 34.615 0.00 0.00 0.00 2.52
7148 11232 7.504924 TGTTGAAATAAAACTCTCGTGGAAT 57.495 32.000 0.00 0.00 0.00 3.01
7149 11233 6.928979 TGTTGAAATAAAACTCTCGTGGAA 57.071 33.333 0.00 0.00 0.00 3.53
7150 11234 6.072728 CCATGTTGAAATAAAACTCTCGTGGA 60.073 38.462 0.00 0.00 0.00 4.02
7151 11235 6.086222 CCATGTTGAAATAAAACTCTCGTGG 58.914 40.000 0.00 0.00 0.00 4.94
7152 11236 5.569059 GCCATGTTGAAATAAAACTCTCGTG 59.431 40.000 0.00 0.00 0.00 4.35
7153 11237 5.473504 AGCCATGTTGAAATAAAACTCTCGT 59.526 36.000 0.00 0.00 0.00 4.18
7154 11238 5.942872 AGCCATGTTGAAATAAAACTCTCG 58.057 37.500 0.00 0.00 0.00 4.04
7155 11239 6.089954 GCAAGCCATGTTGAAATAAAACTCTC 59.910 38.462 0.45 0.00 0.00 3.20
7156 11240 5.928264 GCAAGCCATGTTGAAATAAAACTCT 59.072 36.000 0.45 0.00 0.00 3.24
7157 11241 5.695816 TGCAAGCCATGTTGAAATAAAACTC 59.304 36.000 0.45 0.00 0.00 3.01
7158 11242 5.609423 TGCAAGCCATGTTGAAATAAAACT 58.391 33.333 0.45 0.00 0.00 2.66
7159 11243 5.921004 TGCAAGCCATGTTGAAATAAAAC 57.079 34.783 0.45 0.00 0.00 2.43
7160 11244 6.483385 CATGCAAGCCATGTTGAAATAAAA 57.517 33.333 0.00 0.00 45.05 1.52
7172 11256 4.502604 GGATTAAATCTGCATGCAAGCCAT 60.503 41.667 22.88 8.98 33.39 4.40
7173 11257 3.181473 GGATTAAATCTGCATGCAAGCCA 60.181 43.478 22.88 6.30 0.00 4.75
7174 11258 3.387397 GGATTAAATCTGCATGCAAGCC 58.613 45.455 22.88 14.08 0.00 4.35
7175 11259 3.047796 CGGATTAAATCTGCATGCAAGC 58.952 45.455 22.88 7.04 0.00 4.01
7176 11260 4.297299 ACGGATTAAATCTGCATGCAAG 57.703 40.909 22.88 15.46 39.30 4.01
7177 11261 4.637977 TGTACGGATTAAATCTGCATGCAA 59.362 37.500 22.88 13.05 39.30 4.08
7178 11262 4.195416 TGTACGGATTAAATCTGCATGCA 58.805 39.130 21.29 21.29 39.30 3.96
7179 11263 4.811555 TGTACGGATTAAATCTGCATGC 57.188 40.909 11.82 11.82 39.30 4.06
7180 11264 7.015226 TCTTTGTACGGATTAAATCTGCATG 57.985 36.000 0.00 0.00 39.30 4.06
7181 11265 7.624360 TTCTTTGTACGGATTAAATCTGCAT 57.376 32.000 0.00 0.00 39.30 3.96
7182 11266 7.302524 GTTTCTTTGTACGGATTAAATCTGCA 58.697 34.615 0.00 0.00 39.30 4.41
7183 11267 6.464834 CGTTTCTTTGTACGGATTAAATCTGC 59.535 38.462 0.00 0.00 39.30 4.26
7184 11268 7.735500 TCGTTTCTTTGTACGGATTAAATCTG 58.264 34.615 0.00 0.00 41.49 2.90
7185 11269 7.412672 GCTCGTTTCTTTGTACGGATTAAATCT 60.413 37.037 0.00 0.00 38.26 2.40
7186 11270 6.681599 GCTCGTTTCTTTGTACGGATTAAATC 59.318 38.462 0.00 0.00 38.26 2.17
7187 11271 6.148150 TGCTCGTTTCTTTGTACGGATTAAAT 59.852 34.615 0.00 0.00 38.26 1.40
7188 11272 5.466058 TGCTCGTTTCTTTGTACGGATTAAA 59.534 36.000 0.00 0.00 38.26 1.52
7189 11273 4.989797 TGCTCGTTTCTTTGTACGGATTAA 59.010 37.500 0.00 0.00 38.26 1.40
7190 11274 4.558178 TGCTCGTTTCTTTGTACGGATTA 58.442 39.130 0.00 0.00 38.26 1.75
7191 11275 3.395639 TGCTCGTTTCTTTGTACGGATT 58.604 40.909 0.00 0.00 38.26 3.01
7192 11276 3.034721 TGCTCGTTTCTTTGTACGGAT 57.965 42.857 0.00 0.00 38.26 4.18
7193 11277 2.512485 TGCTCGTTTCTTTGTACGGA 57.488 45.000 0.00 0.00 38.26 4.69
7194 11278 2.542595 ACTTGCTCGTTTCTTTGTACGG 59.457 45.455 0.00 0.00 38.26 4.02
7195 11279 3.244345 TCACTTGCTCGTTTCTTTGTACG 59.756 43.478 0.00 0.00 39.03 3.67
7196 11280 4.789095 TCACTTGCTCGTTTCTTTGTAC 57.211 40.909 0.00 0.00 0.00 2.90
7197 11281 5.053811 TGATCACTTGCTCGTTTCTTTGTA 58.946 37.500 0.00 0.00 0.00 2.41
7198 11282 3.876914 TGATCACTTGCTCGTTTCTTTGT 59.123 39.130 0.00 0.00 0.00 2.83
7199 11283 4.472691 TGATCACTTGCTCGTTTCTTTG 57.527 40.909 0.00 0.00 0.00 2.77
7200 11284 4.614535 GCATGATCACTTGCTCGTTTCTTT 60.615 41.667 13.00 0.00 41.77 2.52
7201 11285 3.120060 GCATGATCACTTGCTCGTTTCTT 60.120 43.478 13.00 0.00 41.77 2.52
7202 11286 2.417933 GCATGATCACTTGCTCGTTTCT 59.582 45.455 13.00 0.00 41.77 2.52
7203 11287 2.160219 TGCATGATCACTTGCTCGTTTC 59.840 45.455 19.29 0.00 44.15 2.78
7204 11288 2.153645 TGCATGATCACTTGCTCGTTT 58.846 42.857 19.29 0.00 44.15 3.60
7205 11289 1.812235 TGCATGATCACTTGCTCGTT 58.188 45.000 19.29 0.00 44.15 3.85
7206 11290 2.034104 ATGCATGATCACTTGCTCGT 57.966 45.000 19.29 5.93 44.15 4.18
7207 11291 3.416119 AAATGCATGATCACTTGCTCG 57.584 42.857 19.29 0.00 44.15 5.03
7208 11292 6.500910 TGAATAAATGCATGATCACTTGCTC 58.499 36.000 19.29 9.85 44.15 4.26
7209 11293 6.459670 TGAATAAATGCATGATCACTTGCT 57.540 33.333 19.29 5.14 44.15 3.91
7210 11294 6.700081 ACATGAATAAATGCATGATCACTTGC 59.300 34.615 16.32 13.32 43.43 4.01
7211 11295 7.918562 TGACATGAATAAATGCATGATCACTTG 59.081 33.333 16.32 0.00 43.43 3.16
7212 11296 8.002984 TGACATGAATAAATGCATGATCACTT 57.997 30.769 16.32 0.00 43.43 3.16
7213 11297 7.576861 TGACATGAATAAATGCATGATCACT 57.423 32.000 16.32 0.00 43.43 3.41
7214 11298 7.865889 ACATGACATGAATAAATGCATGATCAC 59.134 33.333 22.19 6.58 43.43 3.06
7215 11299 7.947282 ACATGACATGAATAAATGCATGATCA 58.053 30.769 22.19 14.79 43.43 2.92
7216 11300 8.812147 AACATGACATGAATAAATGCATGATC 57.188 30.769 22.19 10.68 43.43 2.92
7217 11301 7.593644 CGAACATGACATGAATAAATGCATGAT 59.406 33.333 22.19 12.40 43.43 2.45
7218 11302 6.913673 CGAACATGACATGAATAAATGCATGA 59.086 34.615 22.19 0.00 43.43 3.07
7219 11303 6.143278 CCGAACATGACATGAATAAATGCATG 59.857 38.462 22.19 9.05 45.56 4.06
7220 11304 6.210796 CCGAACATGACATGAATAAATGCAT 58.789 36.000 22.19 0.00 0.00 3.96
7221 11305 5.450274 CCCGAACATGACATGAATAAATGCA 60.450 40.000 22.19 0.00 0.00 3.96
7222 11306 4.977963 CCCGAACATGACATGAATAAATGC 59.022 41.667 22.19 0.00 0.00 3.56
7223 11307 6.375945 TCCCGAACATGACATGAATAAATG 57.624 37.500 22.19 4.51 0.00 2.32
7224 11308 6.772233 TCATCCCGAACATGACATGAATAAAT 59.228 34.615 22.19 5.50 0.00 1.40
7225 11309 6.118852 TCATCCCGAACATGACATGAATAAA 58.881 36.000 22.19 3.45 0.00 1.40
7226 11310 5.679601 TCATCCCGAACATGACATGAATAA 58.320 37.500 22.19 2.93 0.00 1.40
7227 11311 5.289083 TCATCCCGAACATGACATGAATA 57.711 39.130 22.19 1.91 0.00 1.75
7228 11312 4.132336 CTCATCCCGAACATGACATGAAT 58.868 43.478 22.19 10.03 0.00 2.57
7229 11313 3.534554 CTCATCCCGAACATGACATGAA 58.465 45.455 22.19 0.94 0.00 2.57
7230 11314 2.158914 CCTCATCCCGAACATGACATGA 60.159 50.000 22.19 0.00 0.00 3.07
7231 11315 2.216046 CCTCATCCCGAACATGACATG 58.784 52.381 14.02 14.02 0.00 3.21
7232 11316 1.839994 ACCTCATCCCGAACATGACAT 59.160 47.619 0.00 0.00 0.00 3.06
7233 11317 1.066215 CACCTCATCCCGAACATGACA 60.066 52.381 0.00 0.00 0.00 3.58
7234 11318 1.066143 ACACCTCATCCCGAACATGAC 60.066 52.381 0.00 0.00 0.00 3.06
7235 11319 1.275666 ACACCTCATCCCGAACATGA 58.724 50.000 0.00 0.00 0.00 3.07
7236 11320 2.113860 AACACCTCATCCCGAACATG 57.886 50.000 0.00 0.00 0.00 3.21
7237 11321 2.879103 AAACACCTCATCCCGAACAT 57.121 45.000 0.00 0.00 0.00 2.71
7238 11322 2.649531 AAAACACCTCATCCCGAACA 57.350 45.000 0.00 0.00 0.00 3.18
7239 11323 3.120442 CGTAAAAACACCTCATCCCGAAC 60.120 47.826 0.00 0.00 0.00 3.95
7240 11324 3.068560 CGTAAAAACACCTCATCCCGAA 58.931 45.455 0.00 0.00 0.00 4.30
7241 11325 2.613474 CCGTAAAAACACCTCATCCCGA 60.613 50.000 0.00 0.00 0.00 5.14
7242 11326 1.735571 CCGTAAAAACACCTCATCCCG 59.264 52.381 0.00 0.00 0.00 5.14
7243 11327 2.089201 CCCGTAAAAACACCTCATCCC 58.911 52.381 0.00 0.00 0.00 3.85
7244 11328 2.486592 CACCCGTAAAAACACCTCATCC 59.513 50.000 0.00 0.00 0.00 3.51
7245 11329 3.404899 TCACCCGTAAAAACACCTCATC 58.595 45.455 0.00 0.00 0.00 2.92
7246 11330 3.181448 ACTCACCCGTAAAAACACCTCAT 60.181 43.478 0.00 0.00 0.00 2.90
7247 11331 2.171027 ACTCACCCGTAAAAACACCTCA 59.829 45.455 0.00 0.00 0.00 3.86
7248 11332 2.842457 ACTCACCCGTAAAAACACCTC 58.158 47.619 0.00 0.00 0.00 3.85
7249 11333 4.420522 TTACTCACCCGTAAAAACACCT 57.579 40.909 0.00 0.00 0.00 4.00
7250 11334 4.815846 TCTTTACTCACCCGTAAAAACACC 59.184 41.667 0.00 0.00 38.47 4.16
7251 11335 5.989551 TCTTTACTCACCCGTAAAAACAC 57.010 39.130 0.00 0.00 38.47 3.32
7252 11336 6.998968 TTTCTTTACTCACCCGTAAAAACA 57.001 33.333 0.00 0.00 38.47 2.83
7253 11337 7.044771 CGTTTTTCTTTACTCACCCGTAAAAAC 60.045 37.037 0.00 0.00 38.47 2.43
7254 11338 6.966066 CGTTTTTCTTTACTCACCCGTAAAAA 59.034 34.615 0.00 0.00 38.47 1.94
7255 11339 6.314896 TCGTTTTTCTTTACTCACCCGTAAAA 59.685 34.615 0.00 0.00 38.47 1.52
7256 11340 5.814705 TCGTTTTTCTTTACTCACCCGTAAA 59.185 36.000 0.00 0.00 37.10 2.01
7257 11341 5.234116 GTCGTTTTTCTTTACTCACCCGTAA 59.766 40.000 0.00 0.00 0.00 3.18
7258 11342 4.744631 GTCGTTTTTCTTTACTCACCCGTA 59.255 41.667 0.00 0.00 0.00 4.02
7259 11343 3.557185 GTCGTTTTTCTTTACTCACCCGT 59.443 43.478 0.00 0.00 0.00 5.28
7260 11344 3.556775 TGTCGTTTTTCTTTACTCACCCG 59.443 43.478 0.00 0.00 0.00 5.28
7261 11345 5.488645 TTGTCGTTTTTCTTTACTCACCC 57.511 39.130 0.00 0.00 0.00 4.61
7262 11346 7.326547 TGTTTTTGTCGTTTTTCTTTACTCACC 59.673 33.333 0.00 0.00 0.00 4.02
7263 11347 8.218256 TGTTTTTGTCGTTTTTCTTTACTCAC 57.782 30.769 0.00 0.00 0.00 3.51
7264 11348 8.798748 TTGTTTTTGTCGTTTTTCTTTACTCA 57.201 26.923 0.00 0.00 0.00 3.41
7265 11349 9.507233 GTTTGTTTTTGTCGTTTTTCTTTACTC 57.493 29.630 0.00 0.00 0.00 2.59
7266 11350 8.209214 CGTTTGTTTTTGTCGTTTTTCTTTACT 58.791 29.630 0.00 0.00 0.00 2.24
7267 11351 8.206600 TCGTTTGTTTTTGTCGTTTTTCTTTAC 58.793 29.630 0.00 0.00 0.00 2.01
7268 11352 8.278482 TCGTTTGTTTTTGTCGTTTTTCTTTA 57.722 26.923 0.00 0.00 0.00 1.85
7269 11353 7.163027 TCGTTTGTTTTTGTCGTTTTTCTTT 57.837 28.000 0.00 0.00 0.00 2.52
7270 11354 6.750775 TCGTTTGTTTTTGTCGTTTTTCTT 57.249 29.167 0.00 0.00 0.00 2.52
7271 11355 6.804783 AGATCGTTTGTTTTTGTCGTTTTTCT 59.195 30.769 0.00 0.00 0.00 2.52
7272 11356 6.974033 AGATCGTTTGTTTTTGTCGTTTTTC 58.026 32.000 0.00 0.00 0.00 2.29
7273 11357 6.937886 AGATCGTTTGTTTTTGTCGTTTTT 57.062 29.167 0.00 0.00 0.00 1.94
7274 11358 6.937886 AAGATCGTTTGTTTTTGTCGTTTT 57.062 29.167 0.00 0.00 0.00 2.43
7275 11359 7.166804 CCATAAGATCGTTTGTTTTTGTCGTTT 59.833 33.333 0.00 0.00 0.00 3.60
7276 11360 6.635239 CCATAAGATCGTTTGTTTTTGTCGTT 59.365 34.615 0.00 0.00 0.00 3.85
7277 11361 6.140110 CCATAAGATCGTTTGTTTTTGTCGT 58.860 36.000 0.00 0.00 0.00 4.34
7278 11362 6.086241 CACCATAAGATCGTTTGTTTTTGTCG 59.914 38.462 0.00 0.00 0.00 4.35
7279 11363 6.129194 GCACCATAAGATCGTTTGTTTTTGTC 60.129 38.462 0.00 0.00 0.00 3.18
7280 11364 5.689961 GCACCATAAGATCGTTTGTTTTTGT 59.310 36.000 0.00 0.00 0.00 2.83
7281 11365 5.164196 CGCACCATAAGATCGTTTGTTTTTG 60.164 40.000 0.00 0.00 0.00 2.44
7282 11366 4.915085 CGCACCATAAGATCGTTTGTTTTT 59.085 37.500 0.00 0.00 0.00 1.94
7283 11367 4.472286 CGCACCATAAGATCGTTTGTTTT 58.528 39.130 0.00 0.00 0.00 2.43
7284 11368 3.669557 GCGCACCATAAGATCGTTTGTTT 60.670 43.478 0.30 0.00 0.00 2.83
7285 11369 2.159572 GCGCACCATAAGATCGTTTGTT 60.160 45.455 0.30 0.00 0.00 2.83
7286 11370 1.396996 GCGCACCATAAGATCGTTTGT 59.603 47.619 0.30 0.00 0.00 2.83
7287 11371 1.396648 TGCGCACCATAAGATCGTTTG 59.603 47.619 5.66 0.00 0.00 2.93
7288 11372 1.732941 TGCGCACCATAAGATCGTTT 58.267 45.000 5.66 0.00 0.00 3.60
7289 11373 1.867233 GATGCGCACCATAAGATCGTT 59.133 47.619 14.90 0.00 33.29 3.85
7290 11374 1.502231 GATGCGCACCATAAGATCGT 58.498 50.000 14.90 0.00 33.29 3.73
7291 11375 0.436150 CGATGCGCACCATAAGATCG 59.564 55.000 14.90 12.35 33.29 3.69
7292 11376 1.457303 GACGATGCGCACCATAAGATC 59.543 52.381 14.90 2.03 33.29 2.75
7293 11377 1.502231 GACGATGCGCACCATAAGAT 58.498 50.000 14.90 0.00 33.29 2.40
7294 11378 0.529773 GGACGATGCGCACCATAAGA 60.530 55.000 14.90 0.00 33.29 2.10
7295 11379 0.809636 TGGACGATGCGCACCATAAG 60.810 55.000 14.90 2.89 33.51 1.73
7296 11380 0.391793 TTGGACGATGCGCACCATAA 60.392 50.000 14.90 0.00 36.78 1.90
7297 11381 1.087202 GTTGGACGATGCGCACCATA 61.087 55.000 14.90 3.94 36.78 2.74
7298 11382 2.046411 TTGGACGATGCGCACCAT 60.046 55.556 14.90 0.00 36.78 3.55
7299 11383 3.047280 GTTGGACGATGCGCACCA 61.047 61.111 14.90 13.75 35.64 4.17
7300 11384 3.027170 CTGTTGGACGATGCGCACC 62.027 63.158 14.90 10.61 0.00 5.01
7301 11385 2.476051 CTGTTGGACGATGCGCAC 59.524 61.111 14.90 6.01 0.00 5.34
7302 11386 2.741985 CCTGTTGGACGATGCGCA 60.742 61.111 14.96 14.96 34.57 6.09
7303 11387 4.166011 GCCTGTTGGACGATGCGC 62.166 66.667 0.00 0.00 34.57 6.09
7304 11388 3.499737 GGCCTGTTGGACGATGCG 61.500 66.667 0.00 0.00 34.57 4.73
7310 11394 4.717313 GGGGTCGGCCTGTTGGAC 62.717 72.222 5.77 0.00 38.25 4.02
7312 11396 3.583882 AATGGGGTCGGCCTGTTGG 62.584 63.158 5.77 0.00 34.45 3.77
7313 11397 1.595093 GAAATGGGGTCGGCCTGTTG 61.595 60.000 5.77 0.00 34.45 3.33
7314 11398 1.304134 GAAATGGGGTCGGCCTGTT 60.304 57.895 5.77 0.00 34.45 3.16
7315 11399 2.355115 GAAATGGGGTCGGCCTGT 59.645 61.111 5.77 0.00 34.45 4.00
7316 11400 1.750399 CTGAAATGGGGTCGGCCTG 60.750 63.158 5.77 0.00 34.45 4.85
7317 11401 2.677228 CTGAAATGGGGTCGGCCT 59.323 61.111 5.77 0.00 34.45 5.19
7318 11402 2.440247 CCTGAAATGGGGTCGGCC 60.440 66.667 0.00 0.00 0.00 6.13
7319 11403 3.140814 GCCTGAAATGGGGTCGGC 61.141 66.667 0.00 0.00 0.00 5.54
7320 11404 2.824041 CGCCTGAAATGGGGTCGG 60.824 66.667 0.00 0.00 35.60 4.79
7321 11405 2.824041 CCGCCTGAAATGGGGTCG 60.824 66.667 0.00 0.00 38.23 4.79
7322 11406 3.140814 GCCGCCTGAAATGGGGTC 61.141 66.667 0.00 0.00 38.23 4.46
7325 11409 4.794648 TCCGCCGCCTGAAATGGG 62.795 66.667 0.00 0.00 0.00 4.00
7326 11410 3.204827 CTCCGCCGCCTGAAATGG 61.205 66.667 0.00 0.00 0.00 3.16
7327 11411 1.745115 TTCTCCGCCGCCTGAAATG 60.745 57.895 0.00 0.00 0.00 2.32
7328 11412 1.745489 GTTCTCCGCCGCCTGAAAT 60.745 57.895 0.00 0.00 0.00 2.17
7329 11413 2.358247 GTTCTCCGCCGCCTGAAA 60.358 61.111 0.00 0.00 0.00 2.69
7330 11414 4.735132 CGTTCTCCGCCGCCTGAA 62.735 66.667 0.00 0.00 0.00 3.02
7332 11416 4.514577 ATCGTTCTCCGCCGCCTG 62.515 66.667 0.00 0.00 36.19 4.85
7333 11417 4.514577 CATCGTTCTCCGCCGCCT 62.515 66.667 0.00 0.00 36.19 5.52
7337 11421 4.508128 TCCGCATCGTTCTCCGCC 62.508 66.667 0.00 0.00 36.19 6.13
7338 11422 3.255379 GTCCGCATCGTTCTCCGC 61.255 66.667 0.00 0.00 36.19 5.54
7339 11423 1.874019 CAGTCCGCATCGTTCTCCG 60.874 63.158 0.00 0.00 38.13 4.63
7340 11424 2.167861 GCAGTCCGCATCGTTCTCC 61.168 63.158 0.00 0.00 41.79 3.71
7341 11425 2.508891 CGCAGTCCGCATCGTTCTC 61.509 63.158 0.00 0.00 42.60 2.87
7342 11426 2.507102 CGCAGTCCGCATCGTTCT 60.507 61.111 0.00 0.00 42.60 3.01
7343 11427 3.554692 CCGCAGTCCGCATCGTTC 61.555 66.667 0.00 0.00 42.60 3.95
7351 11435 4.421479 AAGACGAGCCGCAGTCCG 62.421 66.667 13.29 4.65 38.08 4.79
7352 11436 2.564553 ATCAAGACGAGCCGCAGTCC 62.565 60.000 13.29 0.07 38.08 3.85
7353 11437 1.153745 ATCAAGACGAGCCGCAGTC 60.154 57.895 10.04 10.04 37.63 3.51
7354 11438 1.446792 CATCAAGACGAGCCGCAGT 60.447 57.895 0.00 0.00 0.00 4.40
7355 11439 1.446792 ACATCAAGACGAGCCGCAG 60.447 57.895 0.00 0.00 0.00 5.18
7356 11440 1.737735 CACATCAAGACGAGCCGCA 60.738 57.895 0.00 0.00 0.00 5.69
7357 11441 2.456119 CCACATCAAGACGAGCCGC 61.456 63.158 0.00 0.00 0.00 6.53
7358 11442 2.456119 GCCACATCAAGACGAGCCG 61.456 63.158 0.00 0.00 0.00 5.52
7359 11443 2.109126 GGCCACATCAAGACGAGCC 61.109 63.158 0.00 0.00 0.00 4.70
7360 11444 1.364626 CTGGCCACATCAAGACGAGC 61.365 60.000 0.00 0.00 0.00 5.03
7361 11445 0.247460 TCTGGCCACATCAAGACGAG 59.753 55.000 0.00 0.00 0.00 4.18
7362 11446 0.684535 TTCTGGCCACATCAAGACGA 59.315 50.000 0.00 0.00 0.00 4.20
7363 11447 0.798776 GTTCTGGCCACATCAAGACG 59.201 55.000 0.00 0.00 0.00 4.18
7364 11448 2.079925 GAGTTCTGGCCACATCAAGAC 58.920 52.381 0.00 0.00 0.00 3.01
7365 11449 1.338105 CGAGTTCTGGCCACATCAAGA 60.338 52.381 0.00 0.00 0.00 3.02
7366 11450 1.081892 CGAGTTCTGGCCACATCAAG 58.918 55.000 0.00 0.00 0.00 3.02
7367 11451 0.321564 CCGAGTTCTGGCCACATCAA 60.322 55.000 0.00 0.00 0.00 2.57
7368 11452 1.296392 CCGAGTTCTGGCCACATCA 59.704 57.895 0.00 0.00 0.00 3.07
7369 11453 4.208632 CCGAGTTCTGGCCACATC 57.791 61.111 0.00 0.00 0.00 3.06
7376 11460 2.202756 GTAGGCGCCGAGTTCTGG 60.203 66.667 23.20 0.00 0.00 3.86
7377 11461 1.517257 CTGTAGGCGCCGAGTTCTG 60.517 63.158 23.20 10.75 0.00 3.02
7378 11462 2.711922 CCTGTAGGCGCCGAGTTCT 61.712 63.158 23.20 4.49 0.00 3.01
7379 11463 2.202756 CCTGTAGGCGCCGAGTTC 60.203 66.667 23.20 11.32 0.00 3.01
7380 11464 3.771160 CCCTGTAGGCGCCGAGTT 61.771 66.667 23.20 5.85 0.00 3.01
7381 11465 4.753662 TCCCTGTAGGCGCCGAGT 62.754 66.667 23.20 6.30 34.51 4.18
7382 11466 3.905678 CTCCCTGTAGGCGCCGAG 61.906 72.222 23.20 16.51 34.51 4.63
7385 11469 3.541713 CTCCTCCCTGTAGGCGCC 61.542 72.222 21.89 21.89 36.51 6.53
7386 11470 4.228567 GCTCCTCCCTGTAGGCGC 62.229 72.222 0.00 0.00 39.97 6.53
7387 11471 3.905678 CGCTCCTCCCTGTAGGCG 61.906 72.222 0.00 0.00 36.51 5.52
7388 11472 2.442272 TCGCTCCTCCCTGTAGGC 60.442 66.667 0.00 0.00 36.51 3.93
7389 11473 1.076632 AGTCGCTCCTCCCTGTAGG 60.077 63.158 0.00 0.00 38.06 3.18
7390 11474 0.394488 TGAGTCGCTCCTCCCTGTAG 60.394 60.000 4.73 0.00 0.00 2.74
7391 11475 0.039180 TTGAGTCGCTCCTCCCTGTA 59.961 55.000 4.73 0.00 0.00 2.74
7392 11476 1.228894 TTGAGTCGCTCCTCCCTGT 60.229 57.895 4.73 0.00 0.00 4.00
7393 11477 1.216710 GTTGAGTCGCTCCTCCCTG 59.783 63.158 4.73 0.00 0.00 4.45
7394 11478 0.832135 TTGTTGAGTCGCTCCTCCCT 60.832 55.000 4.73 0.00 0.00 4.20
7395 11479 0.034896 TTTGTTGAGTCGCTCCTCCC 59.965 55.000 4.73 0.00 0.00 4.30
7396 11480 1.433534 CTTTGTTGAGTCGCTCCTCC 58.566 55.000 4.73 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.