Multiple sequence alignment - TraesCS3D01G210800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G210800 chr3D 100.000 4147 0 0 1 4147 280283956 280279810 0.000000e+00 7659
1 TraesCS3D01G210800 chr3D 90.953 829 69 6 3321 4147 22721434 22722258 0.000000e+00 1110
2 TraesCS3D01G210800 chr3D 86.471 170 21 2 110 278 280283755 280283587 7.080000e-43 185
3 TraesCS3D01G210800 chr3D 86.471 170 21 2 202 370 280283847 280283679 7.080000e-43 185
4 TraesCS3D01G210800 chr3B 94.560 1158 39 7 2154 3296 369284968 369286116 0.000000e+00 1768
5 TraesCS3D01G210800 chr3B 93.926 922 21 15 742 1657 369283928 369284820 0.000000e+00 1360
6 TraesCS3D01G210800 chr3B 87.867 511 47 11 202 707 369244574 369245074 1.660000e-163 586
7 TraesCS3D01G210800 chr3B 98.089 157 3 0 1684 1840 369284820 369284976 1.470000e-69 274
8 TraesCS3D01G210800 chr3B 87.135 171 18 3 87 256 369244551 369244718 1.520000e-44 191
9 TraesCS3D01G210800 chr3A 94.887 1017 33 6 2313 3319 366634027 366633020 0.000000e+00 1572
10 TraesCS3D01G210800 chr3A 95.710 909 17 9 754 1657 366635387 366634496 0.000000e+00 1443
11 TraesCS3D01G210800 chr3A 92.075 429 31 3 202 629 366638791 366638365 5.930000e-168 601
12 TraesCS3D01G210800 chr3A 88.172 279 30 3 1 278 366638901 366638625 3.090000e-86 329
13 TraesCS3D01G210800 chr3A 98.726 157 2 0 1684 1840 366634496 366634340 3.160000e-71 279
14 TraesCS3D01G210800 chr3A 95.513 156 6 1 2153 2308 366634348 366634194 8.900000e-62 248
15 TraesCS3D01G210800 chr2B 89.916 833 77 7 3318 4147 452797887 452798715 0.000000e+00 1066
16 TraesCS3D01G210800 chr1D 91.799 756 48 10 3321 4068 405389377 405390126 0.000000e+00 1040
17 TraesCS3D01G210800 chr5B 88.101 832 85 13 3321 4147 530799650 530798828 0.000000e+00 976
18 TraesCS3D01G210800 chr6B 87.861 832 88 12 3321 4147 217469258 217470081 0.000000e+00 965
19 TraesCS3D01G210800 chr6B 87.440 836 86 17 3321 4147 98989657 98990482 0.000000e+00 944
20 TraesCS3D01G210800 chr6A 86.993 838 84 21 3314 4144 150921709 150920890 0.000000e+00 920
21 TraesCS3D01G210800 chr6A 90.461 304 28 1 1852 2155 167650016 167649714 2.320000e-107 399
22 TraesCS3D01G210800 chr6A 90.228 307 27 3 1852 2156 349375182 349375487 8.350000e-107 398
23 TraesCS3D01G210800 chr4A 86.811 834 97 11 3319 4147 707878193 707879018 0.000000e+00 918
24 TraesCS3D01G210800 chr4A 90.132 304 30 0 1852 2155 166198781 166198478 3.000000e-106 396
25 TraesCS3D01G210800 chr5A 86.747 830 94 15 3321 4145 609858483 609859301 0.000000e+00 909
26 TraesCS3D01G210800 chr5A 90.164 305 29 1 1852 2156 674286165 674286468 3.000000e-106 396
27 TraesCS3D01G210800 chr6D 90.000 310 30 1 1843 2152 109307541 109307849 2.320000e-107 399
28 TraesCS3D01G210800 chr2A 90.196 306 29 1 1852 2156 44469874 44470179 8.350000e-107 398
29 TraesCS3D01G210800 chr7A 89.457 313 32 1 1852 2163 546656452 546656764 1.080000e-105 394
30 TraesCS3D01G210800 chr4D 88.924 316 34 1 1838 2152 328512161 328512476 5.030000e-104 388
31 TraesCS3D01G210800 chr2D 88.438 320 37 0 1836 2155 129082921 129082602 1.810000e-103 387


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G210800 chr3D 280279810 280283956 4146 True 2676.333333 7659 90.980667 1 4147 3 chr3D.!!$R1 4146
1 TraesCS3D01G210800 chr3D 22721434 22722258 824 False 1110.000000 1110 90.953000 3321 4147 1 chr3D.!!$F1 826
2 TraesCS3D01G210800 chr3B 369283928 369286116 2188 False 1134.000000 1768 95.525000 742 3296 3 chr3B.!!$F2 2554
3 TraesCS3D01G210800 chr3B 369244551 369245074 523 False 388.500000 586 87.501000 87 707 2 chr3B.!!$F1 620
4 TraesCS3D01G210800 chr3A 366633020 366638901 5881 True 745.333333 1572 94.180500 1 3319 6 chr3A.!!$R1 3318
5 TraesCS3D01G210800 chr2B 452797887 452798715 828 False 1066.000000 1066 89.916000 3318 4147 1 chr2B.!!$F1 829
6 TraesCS3D01G210800 chr1D 405389377 405390126 749 False 1040.000000 1040 91.799000 3321 4068 1 chr1D.!!$F1 747
7 TraesCS3D01G210800 chr5B 530798828 530799650 822 True 976.000000 976 88.101000 3321 4147 1 chr5B.!!$R1 826
8 TraesCS3D01G210800 chr6B 217469258 217470081 823 False 965.000000 965 87.861000 3321 4147 1 chr6B.!!$F2 826
9 TraesCS3D01G210800 chr6B 98989657 98990482 825 False 944.000000 944 87.440000 3321 4147 1 chr6B.!!$F1 826
10 TraesCS3D01G210800 chr6A 150920890 150921709 819 True 920.000000 920 86.993000 3314 4144 1 chr6A.!!$R1 830
11 TraesCS3D01G210800 chr4A 707878193 707879018 825 False 918.000000 918 86.811000 3319 4147 1 chr4A.!!$F1 828
12 TraesCS3D01G210800 chr5A 609858483 609859301 818 False 909.000000 909 86.747000 3321 4145 1 chr5A.!!$F1 824

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 470 0.034059 CCCGACATGGCTCATCCTAC 59.966 60.000 0.00 0.0 35.87 3.18 F
1363 4241 1.379044 GGGCATGCACCTAGCTTGT 60.379 57.895 21.36 0.0 46.82 3.16 F
1954 4832 0.033228 CCATTCCGTGGCAAAAGCAA 59.967 50.000 0.00 0.0 42.12 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 4261 0.112995 ACCAGCAAAATGAGGAGCCA 59.887 50.000 0.00 0.0 0.00 4.75 R
3121 6165 0.253044 GGGCAGCCAGTGTATGAAGA 59.747 55.000 15.19 0.0 0.00 2.87 R
3688 6749 1.695242 TGGCAACTCGGGTAAAAGAGA 59.305 47.619 0.00 0.0 37.87 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 46 2.552743 GGTGTTAGCTTCCTTGGACAAC 59.447 50.000 0.00 0.00 0.00 3.32
49 51 5.012664 TGTTAGCTTCCTTGGACAACAGATA 59.987 40.000 0.00 0.00 0.00 1.98
85 87 2.507058 ACTATTTGCATCTCCTCCTGCA 59.493 45.455 0.00 0.00 46.08 4.41
101 103 0.478072 TGCACCATTCACAACCTCCT 59.522 50.000 0.00 0.00 0.00 3.69
108 110 4.141158 ACCATTCACAACCTCCTCTCTTTT 60.141 41.667 0.00 0.00 0.00 2.27
114 116 5.104277 TCACAACCTCCTCTCTTTTTGGTTA 60.104 40.000 0.00 0.00 36.22 2.85
173 175 0.671472 TTGCAGCTCCATCGACTGTG 60.671 55.000 0.00 0.00 33.87 3.66
188 190 1.148310 CTGTGGTTTGTAGCTCACCG 58.852 55.000 0.00 0.00 0.00 4.94
191 193 0.753867 TGGTTTGTAGCTCACCGTCA 59.246 50.000 0.00 0.00 0.00 4.35
235 237 4.929819 AAAAAGGACGGTTGTAGCATTT 57.070 36.364 0.00 0.00 0.00 2.32
236 238 4.929819 AAAAGGACGGTTGTAGCATTTT 57.070 36.364 0.00 0.00 0.00 1.82
237 239 3.915437 AAGGACGGTTGTAGCATTTTG 57.085 42.857 0.00 0.00 0.00 2.44
238 240 2.858745 AGGACGGTTGTAGCATTTTGT 58.141 42.857 0.00 0.00 0.00 2.83
239 241 4.010667 AGGACGGTTGTAGCATTTTGTA 57.989 40.909 0.00 0.00 0.00 2.41
240 242 3.749609 AGGACGGTTGTAGCATTTTGTAC 59.250 43.478 0.00 0.00 0.00 2.90
241 243 3.120095 GGACGGTTGTAGCATTTTGTACC 60.120 47.826 0.00 0.00 0.00 3.34
242 244 3.478509 ACGGTTGTAGCATTTTGTACCA 58.521 40.909 0.00 0.00 0.00 3.25
243 245 3.251487 ACGGTTGTAGCATTTTGTACCAC 59.749 43.478 0.00 0.00 0.00 4.16
244 246 3.500680 CGGTTGTAGCATTTTGTACCACT 59.499 43.478 0.00 0.00 0.00 4.00
245 247 4.612712 CGGTTGTAGCATTTTGTACCACTG 60.613 45.833 0.00 0.00 0.00 3.66
246 248 4.320935 GGTTGTAGCATTTTGTACCACTGG 60.321 45.833 0.00 0.00 0.00 4.00
247 249 4.093472 TGTAGCATTTTGTACCACTGGT 57.907 40.909 5.88 5.88 40.16 4.00
248 250 4.465886 TGTAGCATTTTGTACCACTGGTT 58.534 39.130 5.90 0.00 37.09 3.67
249 251 4.277174 TGTAGCATTTTGTACCACTGGTTG 59.723 41.667 5.90 0.00 37.09 3.77
250 252 2.035832 AGCATTTTGTACCACTGGTTGC 59.964 45.455 5.90 9.03 37.09 4.17
251 253 2.223923 GCATTTTGTACCACTGGTTGCA 60.224 45.455 5.90 3.62 37.09 4.08
252 254 3.641648 CATTTTGTACCACTGGTTGCAG 58.358 45.455 5.90 0.00 37.09 4.41
253 255 1.028905 TTTGTACCACTGGTTGCAGC 58.971 50.000 5.90 0.00 37.09 5.25
254 256 0.182537 TTGTACCACTGGTTGCAGCT 59.817 50.000 5.90 0.00 37.09 4.24
255 257 0.250295 TGTACCACTGGTTGCAGCTC 60.250 55.000 5.90 0.00 37.09 4.09
256 258 0.955919 GTACCACTGGTTGCAGCTCC 60.956 60.000 5.90 0.00 37.09 4.70
257 259 1.414866 TACCACTGGTTGCAGCTCCA 61.415 55.000 5.90 9.05 37.09 3.86
258 260 1.303888 CCACTGGTTGCAGCTCCAT 60.304 57.895 9.68 0.42 33.01 3.41
259 261 1.310933 CCACTGGTTGCAGCTCCATC 61.311 60.000 9.68 0.00 33.01 3.51
260 262 1.376424 ACTGGTTGCAGCTCCATCG 60.376 57.895 9.68 3.56 33.01 3.84
261 263 1.078918 CTGGTTGCAGCTCCATCGA 60.079 57.895 9.68 0.00 33.01 3.59
262 264 1.364626 CTGGTTGCAGCTCCATCGAC 61.365 60.000 9.68 0.00 33.01 4.20
263 265 1.078848 GGTTGCAGCTCCATCGACT 60.079 57.895 0.00 0.00 0.00 4.18
264 266 1.364626 GGTTGCAGCTCCATCGACTG 61.365 60.000 0.00 0.00 34.48 3.51
265 267 0.671781 GTTGCAGCTCCATCGACTGT 60.672 55.000 0.00 0.00 33.87 3.55
266 268 0.390340 TTGCAGCTCCATCGACTGTC 60.390 55.000 0.00 0.00 33.87 3.51
267 269 1.875813 GCAGCTCCATCGACTGTCG 60.876 63.158 23.33 23.33 42.10 4.35
268 270 1.508545 CAGCTCCATCGACTGTCGT 59.491 57.895 27.16 13.63 41.35 4.34
269 271 0.109086 CAGCTCCATCGACTGTCGTT 60.109 55.000 27.16 17.93 41.35 3.85
270 272 0.603569 AGCTCCATCGACTGTCGTTT 59.396 50.000 27.16 14.86 41.35 3.60
271 273 0.716108 GCTCCATCGACTGTCGTTTG 59.284 55.000 27.16 23.43 41.35 2.93
272 274 1.935300 GCTCCATCGACTGTCGTTTGT 60.935 52.381 27.16 11.24 41.35 2.83
273 275 2.670229 GCTCCATCGACTGTCGTTTGTA 60.670 50.000 27.16 13.61 41.35 2.41
274 276 3.172050 CTCCATCGACTGTCGTTTGTAG 58.828 50.000 27.16 18.14 41.35 2.74
275 277 1.654105 CCATCGACTGTCGTTTGTAGC 59.346 52.381 27.16 0.00 41.35 3.58
276 278 2.596452 CATCGACTGTCGTTTGTAGCT 58.404 47.619 27.16 0.00 41.35 3.32
277 279 2.327081 TCGACTGTCGTTTGTAGCTC 57.673 50.000 27.16 0.00 41.35 4.09
278 280 1.605232 TCGACTGTCGTTTGTAGCTCA 59.395 47.619 27.16 3.58 41.35 4.26
279 281 1.714460 CGACTGTCGTTTGTAGCTCAC 59.286 52.381 21.30 0.00 34.72 3.51
280 282 2.059541 GACTGTCGTTTGTAGCTCACC 58.940 52.381 0.00 0.00 0.00 4.02
281 283 1.060713 CTGTCGTTTGTAGCTCACCG 58.939 55.000 0.00 0.00 0.00 4.94
282 284 0.386476 TGTCGTTTGTAGCTCACCGT 59.614 50.000 0.00 0.00 0.00 4.83
283 285 1.058404 GTCGTTTGTAGCTCACCGTC 58.942 55.000 0.00 0.00 0.00 4.79
284 286 0.669619 TCGTTTGTAGCTCACCGTCA 59.330 50.000 0.00 0.00 0.00 4.35
285 287 1.271379 TCGTTTGTAGCTCACCGTCAT 59.729 47.619 0.00 0.00 0.00 3.06
286 288 1.654105 CGTTTGTAGCTCACCGTCATC 59.346 52.381 0.00 0.00 0.00 2.92
287 289 2.683968 GTTTGTAGCTCACCGTCATCA 58.316 47.619 0.00 0.00 0.00 3.07
288 290 2.363788 TTGTAGCTCACCGTCATCAC 57.636 50.000 0.00 0.00 0.00 3.06
289 291 1.545841 TGTAGCTCACCGTCATCACT 58.454 50.000 0.00 0.00 0.00 3.41
290 292 1.893137 TGTAGCTCACCGTCATCACTT 59.107 47.619 0.00 0.00 0.00 3.16
291 293 2.299013 TGTAGCTCACCGTCATCACTTT 59.701 45.455 0.00 0.00 0.00 2.66
292 294 3.508402 TGTAGCTCACCGTCATCACTTTA 59.492 43.478 0.00 0.00 0.00 1.85
293 295 3.678056 AGCTCACCGTCATCACTTTAA 57.322 42.857 0.00 0.00 0.00 1.52
294 296 4.207891 AGCTCACCGTCATCACTTTAAT 57.792 40.909 0.00 0.00 0.00 1.40
295 297 3.935203 AGCTCACCGTCATCACTTTAATG 59.065 43.478 0.00 0.00 0.00 1.90
296 298 3.063997 GCTCACCGTCATCACTTTAATGG 59.936 47.826 0.00 0.00 0.00 3.16
297 299 4.253685 CTCACCGTCATCACTTTAATGGT 58.746 43.478 0.00 0.00 0.00 3.55
298 300 4.647611 TCACCGTCATCACTTTAATGGTT 58.352 39.130 0.00 0.00 0.00 3.67
299 301 4.693566 TCACCGTCATCACTTTAATGGTTC 59.306 41.667 0.00 0.00 0.00 3.62
300 302 4.007659 ACCGTCATCACTTTAATGGTTCC 58.992 43.478 0.00 0.00 0.00 3.62
301 303 4.006989 CCGTCATCACTTTAATGGTTCCA 58.993 43.478 0.00 0.00 0.00 3.53
302 304 4.094887 CCGTCATCACTTTAATGGTTCCAG 59.905 45.833 0.00 0.00 0.00 3.86
303 305 4.437390 CGTCATCACTTTAATGGTTCCAGC 60.437 45.833 0.00 0.00 0.00 4.85
304 306 4.458989 GTCATCACTTTAATGGTTCCAGCA 59.541 41.667 0.00 0.00 0.00 4.41
305 307 5.048083 GTCATCACTTTAATGGTTCCAGCAA 60.048 40.000 0.00 0.00 0.00 3.91
306 308 5.538053 TCATCACTTTAATGGTTCCAGCAAA 59.462 36.000 0.00 0.12 0.00 3.68
307 309 5.860941 TCACTTTAATGGTTCCAGCAAAA 57.139 34.783 0.00 0.00 0.00 2.44
454 457 2.273179 CGTCTTCTCCACCCCGACA 61.273 63.158 0.00 0.00 0.00 4.35
462 465 2.591753 CACCCCGACATGGCTCAT 59.408 61.111 0.00 0.00 35.87 2.90
467 470 0.034059 CCCGACATGGCTCATCCTAC 59.966 60.000 0.00 0.00 35.87 3.18
538 542 2.563179 AGGAACTGAGTGATTGTAGCGT 59.437 45.455 0.00 0.00 37.18 5.07
568 572 2.052157 CTCGTCGTGAGGTTGAAGAAC 58.948 52.381 0.00 0.00 41.29 3.01
594 598 3.232720 AGGTGGGAAAACGGTTTGTAT 57.767 42.857 1.45 0.00 0.00 2.29
614 618 3.983533 TTGGAAAGGGAAAAGAGGGAA 57.016 42.857 0.00 0.00 0.00 3.97
659 675 4.705519 CGTGCGTCCGGGTAACGT 62.706 66.667 14.72 0.00 42.02 3.99
660 676 2.356194 GTGCGTCCGGGTAACGTT 60.356 61.111 14.72 5.88 42.02 3.99
661 677 1.955663 GTGCGTCCGGGTAACGTTT 60.956 57.895 5.91 0.00 42.02 3.60
662 678 1.664333 TGCGTCCGGGTAACGTTTC 60.664 57.895 5.91 0.00 42.02 2.78
663 679 2.719774 GCGTCCGGGTAACGTTTCG 61.720 63.158 5.91 8.69 42.02 3.46
664 680 2.088178 CGTCCGGGTAACGTTTCGG 61.088 63.158 22.73 22.73 42.24 4.30
665 681 2.048316 TCCGGGTAACGTTTCGGC 60.048 61.111 23.45 7.59 41.98 5.54
666 682 3.120385 CCGGGTAACGTTTCGGCC 61.120 66.667 19.14 11.59 42.24 6.13
667 683 3.481024 CGGGTAACGTTTCGGCCG 61.481 66.667 22.12 22.12 37.93 6.13
668 684 3.120385 GGGTAACGTTTCGGCCGG 61.120 66.667 27.83 11.94 37.60 6.13
689 714 2.726633 CGCACCAGATGAAAACGTTTT 58.273 42.857 25.46 25.46 0.00 2.43
699 724 6.701400 CAGATGAAAACGTTTTCCTTGGAAAT 59.299 34.615 37.53 26.76 44.48 2.17
734 785 5.221641 GGGCAGAATTAGTTTGGAAGGTTTT 60.222 40.000 0.00 0.00 0.00 2.43
736 787 7.438564 GGCAGAATTAGTTTGGAAGGTTTTAA 58.561 34.615 0.00 0.00 0.00 1.52
1322 4199 2.545113 GCCGGTATGATTTAGCGTCTCA 60.545 50.000 1.90 0.00 36.79 3.27
1363 4241 1.379044 GGGCATGCACCTAGCTTGT 60.379 57.895 21.36 0.00 46.82 3.16
1381 4259 6.705302 AGCTTGTAGTCTGAATGAAAGATGA 58.295 36.000 5.99 0.00 0.00 2.92
1382 4260 7.337167 AGCTTGTAGTCTGAATGAAAGATGAT 58.663 34.615 5.99 0.00 0.00 2.45
1383 4261 7.828223 AGCTTGTAGTCTGAATGAAAGATGATT 59.172 33.333 5.99 0.00 0.00 2.57
1384 4262 7.909121 GCTTGTAGTCTGAATGAAAGATGATTG 59.091 37.037 5.99 0.00 0.00 2.67
1385 4263 7.854557 TGTAGTCTGAATGAAAGATGATTGG 57.145 36.000 0.00 0.00 0.00 3.16
1386 4264 5.831702 AGTCTGAATGAAAGATGATTGGC 57.168 39.130 0.00 0.00 0.00 4.52
1387 4265 5.507637 AGTCTGAATGAAAGATGATTGGCT 58.492 37.500 0.00 0.00 0.00 4.75
1388 4266 5.589452 AGTCTGAATGAAAGATGATTGGCTC 59.411 40.000 0.00 0.00 0.00 4.70
1389 4267 4.885907 TCTGAATGAAAGATGATTGGCTCC 59.114 41.667 0.00 0.00 0.00 4.70
1390 4268 4.863548 TGAATGAAAGATGATTGGCTCCT 58.136 39.130 0.00 0.00 0.00 3.69
1391 4269 4.885907 TGAATGAAAGATGATTGGCTCCTC 59.114 41.667 0.00 0.00 0.00 3.71
1392 4270 4.515028 ATGAAAGATGATTGGCTCCTCA 57.485 40.909 0.00 0.00 0.00 3.86
1393 4271 4.515028 TGAAAGATGATTGGCTCCTCAT 57.485 40.909 0.00 0.00 34.86 2.90
1403 4281 1.354031 TGGCTCCTCATTTTGCTGGTA 59.646 47.619 0.00 0.00 0.00 3.25
1483 4361 3.385384 TGGGCAGAGCTGAGTCCG 61.385 66.667 0.85 0.00 0.00 4.79
1602 4480 3.200483 GGCCGTTCGTTATGGTTCTATT 58.800 45.455 0.00 0.00 35.16 1.73
1656 4534 4.689612 AGTATGTTGTTCCTCACAGTGT 57.310 40.909 0.00 0.00 36.48 3.55
1657 4535 5.801531 AGTATGTTGTTCCTCACAGTGTA 57.198 39.130 0.00 0.00 36.48 2.90
1658 4536 6.169557 AGTATGTTGTTCCTCACAGTGTAA 57.830 37.500 0.00 0.00 36.48 2.41
1659 4537 5.989777 AGTATGTTGTTCCTCACAGTGTAAC 59.010 40.000 0.00 0.00 36.48 2.50
1660 4538 4.209307 TGTTGTTCCTCACAGTGTAACA 57.791 40.909 5.42 5.42 41.43 2.41
1661 4539 4.580868 TGTTGTTCCTCACAGTGTAACAA 58.419 39.130 15.01 15.01 41.43 2.83
1662 4540 5.004448 TGTTGTTCCTCACAGTGTAACAAA 58.996 37.500 18.86 10.08 40.55 2.83
1663 4541 5.650266 TGTTGTTCCTCACAGTGTAACAAAT 59.350 36.000 18.86 0.00 40.55 2.32
1664 4542 6.824196 TGTTGTTCCTCACAGTGTAACAAATA 59.176 34.615 18.86 11.29 40.55 1.40
1665 4543 6.854496 TGTTCCTCACAGTGTAACAAATAC 57.146 37.500 6.83 0.00 41.43 1.89
1666 4544 6.350103 TGTTCCTCACAGTGTAACAAATACA 58.650 36.000 6.83 0.00 42.22 2.29
1667 4545 6.995686 TGTTCCTCACAGTGTAACAAATACAT 59.004 34.615 6.83 0.00 45.87 2.29
1668 4546 7.041440 TGTTCCTCACAGTGTAACAAATACATG 60.041 37.037 6.83 0.00 45.87 3.21
1669 4547 6.764379 TCCTCACAGTGTAACAAATACATGA 58.236 36.000 0.00 0.00 45.87 3.07
1670 4548 7.394016 TCCTCACAGTGTAACAAATACATGAT 58.606 34.615 0.00 0.00 45.87 2.45
1671 4549 7.334171 TCCTCACAGTGTAACAAATACATGATG 59.666 37.037 0.00 0.00 45.87 3.07
1672 4550 7.119699 CCTCACAGTGTAACAAATACATGATGT 59.880 37.037 2.65 2.65 45.87 3.06
1673 4551 7.805700 TCACAGTGTAACAAATACATGATGTG 58.194 34.615 8.61 16.80 45.87 3.21
1674 4552 7.443879 TCACAGTGTAACAAATACATGATGTGT 59.556 33.333 8.61 0.00 45.87 3.72
1675 4553 7.534918 CACAGTGTAACAAATACATGATGTGTG 59.465 37.037 8.61 6.29 45.87 3.82
1676 4554 7.228507 ACAGTGTAACAAATACATGATGTGTGT 59.771 33.333 8.61 6.92 45.87 3.72
1677 4555 7.746034 CAGTGTAACAAATACATGATGTGTGTC 59.254 37.037 8.61 0.58 45.87 3.67
1678 4556 7.021196 GTGTAACAAATACATGATGTGTGTCC 58.979 38.462 8.61 5.31 45.87 4.02
1679 4557 6.939730 TGTAACAAATACATGATGTGTGTCCT 59.060 34.615 8.61 0.00 42.24 3.85
1680 4558 6.500684 AACAAATACATGATGTGTGTCCTC 57.499 37.500 8.61 0.00 42.24 3.71
1681 4559 5.809001 ACAAATACATGATGTGTGTCCTCT 58.191 37.500 8.61 0.00 42.24 3.69
1682 4560 6.240894 ACAAATACATGATGTGTGTCCTCTT 58.759 36.000 8.61 0.00 42.24 2.85
1797 4675 1.070758 TGTCTCTTGTGGTTCTCAGGC 59.929 52.381 0.00 0.00 0.00 4.85
1840 4718 1.323534 CGTCGGCCGTATTTGAGAAAG 59.676 52.381 27.15 0.00 0.00 2.62
1841 4719 1.664151 GTCGGCCGTATTTGAGAAAGG 59.336 52.381 27.15 0.00 0.00 3.11
1842 4720 1.014352 CGGCCGTATTTGAGAAAGGG 58.986 55.000 19.50 0.00 0.00 3.95
1843 4721 1.406341 CGGCCGTATTTGAGAAAGGGA 60.406 52.381 19.50 0.00 0.00 4.20
1844 4722 2.718563 GGCCGTATTTGAGAAAGGGAA 58.281 47.619 0.00 0.00 0.00 3.97
1845 4723 3.086282 GGCCGTATTTGAGAAAGGGAAA 58.914 45.455 0.00 0.00 0.00 3.13
1846 4724 3.508402 GGCCGTATTTGAGAAAGGGAAAA 59.492 43.478 0.00 0.00 0.00 2.29
1847 4725 4.482386 GCCGTATTTGAGAAAGGGAAAAC 58.518 43.478 0.00 0.00 0.00 2.43
1848 4726 4.217767 GCCGTATTTGAGAAAGGGAAAACT 59.782 41.667 0.00 0.00 0.00 2.66
1849 4727 5.278808 GCCGTATTTGAGAAAGGGAAAACTT 60.279 40.000 0.00 0.00 0.00 2.66
1850 4728 6.737622 GCCGTATTTGAGAAAGGGAAAACTTT 60.738 38.462 0.00 0.00 42.99 2.66
1851 4729 6.640907 CCGTATTTGAGAAAGGGAAAACTTTG 59.359 38.462 0.00 0.00 40.55 2.77
1852 4730 7.200455 CGTATTTGAGAAAGGGAAAACTTTGT 58.800 34.615 0.00 0.00 40.55 2.83
1853 4731 7.704899 CGTATTTGAGAAAGGGAAAACTTTGTT 59.295 33.333 0.00 0.00 40.55 2.83
1854 4732 9.378551 GTATTTGAGAAAGGGAAAACTTTGTTT 57.621 29.630 0.00 0.00 40.55 2.83
1855 4733 8.862325 ATTTGAGAAAGGGAAAACTTTGTTTT 57.138 26.923 7.97 7.97 40.55 2.43
1856 4734 8.684386 TTTGAGAAAGGGAAAACTTTGTTTTT 57.316 26.923 9.36 0.00 40.55 1.94
1857 4735 7.665561 TGAGAAAGGGAAAACTTTGTTTTTG 57.334 32.000 9.36 0.00 40.55 2.44
1858 4736 6.148645 TGAGAAAGGGAAAACTTTGTTTTTGC 59.851 34.615 9.36 0.00 40.55 3.68
1864 4742 6.978343 GGAAAACTTTGTTTTTGCCTACTT 57.022 33.333 9.36 0.00 32.30 2.24
1865 4743 7.372451 GGAAAACTTTGTTTTTGCCTACTTT 57.628 32.000 9.36 0.00 32.30 2.66
1866 4744 7.240674 GGAAAACTTTGTTTTTGCCTACTTTG 58.759 34.615 9.36 0.00 32.30 2.77
1867 4745 5.794687 AACTTTGTTTTTGCCTACTTTGC 57.205 34.783 0.00 0.00 0.00 3.68
1868 4746 5.084818 ACTTTGTTTTTGCCTACTTTGCT 57.915 34.783 0.00 0.00 0.00 3.91
1869 4747 5.487433 ACTTTGTTTTTGCCTACTTTGCTT 58.513 33.333 0.00 0.00 0.00 3.91
1870 4748 6.635755 ACTTTGTTTTTGCCTACTTTGCTTA 58.364 32.000 0.00 0.00 0.00 3.09
1871 4749 7.272244 ACTTTGTTTTTGCCTACTTTGCTTAT 58.728 30.769 0.00 0.00 0.00 1.73
1872 4750 7.224557 ACTTTGTTTTTGCCTACTTTGCTTATG 59.775 33.333 0.00 0.00 0.00 1.90
1873 4751 6.155475 TGTTTTTGCCTACTTTGCTTATGT 57.845 33.333 0.00 0.00 0.00 2.29
1874 4752 6.212955 TGTTTTTGCCTACTTTGCTTATGTC 58.787 36.000 0.00 0.00 0.00 3.06
1875 4753 6.183360 TGTTTTTGCCTACTTTGCTTATGTCA 60.183 34.615 0.00 0.00 0.00 3.58
1876 4754 6.588719 TTTTGCCTACTTTGCTTATGTCAT 57.411 33.333 0.00 0.00 0.00 3.06
1877 4755 6.588719 TTTGCCTACTTTGCTTATGTCATT 57.411 33.333 0.00 0.00 0.00 2.57
1878 4756 6.588719 TTGCCTACTTTGCTTATGTCATTT 57.411 33.333 0.00 0.00 0.00 2.32
1879 4757 6.588719 TGCCTACTTTGCTTATGTCATTTT 57.411 33.333 0.00 0.00 0.00 1.82
1880 4758 7.695480 TGCCTACTTTGCTTATGTCATTTTA 57.305 32.000 0.00 0.00 0.00 1.52
1881 4759 7.761409 TGCCTACTTTGCTTATGTCATTTTAG 58.239 34.615 0.00 0.00 0.00 1.85
1882 4760 7.609918 TGCCTACTTTGCTTATGTCATTTTAGA 59.390 33.333 0.00 0.00 0.00 2.10
1883 4761 8.458843 GCCTACTTTGCTTATGTCATTTTAGAA 58.541 33.333 0.00 0.00 0.00 2.10
1906 4784 9.341078 AGAATTTGACATTTTATTTTTGCCAGT 57.659 25.926 0.00 0.00 0.00 4.00
1907 4785 9.949174 GAATTTGACATTTTATTTTTGCCAGTT 57.051 25.926 0.00 0.00 0.00 3.16
1912 4790 8.555361 TGACATTTTATTTTTGCCAGTTTTAGC 58.445 29.630 0.00 0.00 0.00 3.09
1913 4791 8.675705 ACATTTTATTTTTGCCAGTTTTAGCT 57.324 26.923 0.00 0.00 0.00 3.32
1914 4792 9.119418 ACATTTTATTTTTGCCAGTTTTAGCTT 57.881 25.926 0.00 0.00 0.00 3.74
1915 4793 9.949174 CATTTTATTTTTGCCAGTTTTAGCTTT 57.051 25.926 0.00 0.00 0.00 3.51
1917 4795 9.780413 TTTTATTTTTGCCAGTTTTAGCTTTTG 57.220 25.926 0.00 0.00 0.00 2.44
1918 4796 8.723942 TTATTTTTGCCAGTTTTAGCTTTTGA 57.276 26.923 0.00 0.00 0.00 2.69
1919 4797 6.415798 TTTTTGCCAGTTTTAGCTTTTGAC 57.584 33.333 0.00 0.00 0.00 3.18
1920 4798 4.727507 TTGCCAGTTTTAGCTTTTGACA 57.272 36.364 0.00 0.00 0.00 3.58
1921 4799 4.727507 TGCCAGTTTTAGCTTTTGACAA 57.272 36.364 0.00 0.00 0.00 3.18
1922 4800 5.275067 TGCCAGTTTTAGCTTTTGACAAT 57.725 34.783 0.00 0.00 0.00 2.71
1923 4801 6.398234 TGCCAGTTTTAGCTTTTGACAATA 57.602 33.333 0.00 0.00 0.00 1.90
1924 4802 6.991938 TGCCAGTTTTAGCTTTTGACAATAT 58.008 32.000 0.00 0.00 0.00 1.28
1925 4803 8.116651 TGCCAGTTTTAGCTTTTGACAATATA 57.883 30.769 0.00 0.00 0.00 0.86
1926 4804 8.748412 TGCCAGTTTTAGCTTTTGACAATATAT 58.252 29.630 0.00 0.00 0.00 0.86
1927 4805 9.237846 GCCAGTTTTAGCTTTTGACAATATATC 57.762 33.333 0.00 0.00 0.00 1.63
1935 4813 8.693542 AGCTTTTGACAATATATCACTTTTGC 57.306 30.769 0.00 0.00 0.00 3.68
1936 4814 7.761249 AGCTTTTGACAATATATCACTTTTGCC 59.239 33.333 0.00 0.00 0.00 4.52
1937 4815 7.545265 GCTTTTGACAATATATCACTTTTGCCA 59.455 33.333 0.00 0.00 0.00 4.92
1938 4816 9.590451 CTTTTGACAATATATCACTTTTGCCAT 57.410 29.630 0.00 0.00 0.00 4.40
1939 4817 9.941325 TTTTGACAATATATCACTTTTGCCATT 57.059 25.926 0.00 0.00 0.00 3.16
1940 4818 9.585099 TTTGACAATATATCACTTTTGCCATTC 57.415 29.630 0.00 0.00 0.00 2.67
1941 4819 7.715657 TGACAATATATCACTTTTGCCATTCC 58.284 34.615 0.00 0.00 0.00 3.01
1942 4820 6.738114 ACAATATATCACTTTTGCCATTCCG 58.262 36.000 0.00 0.00 0.00 4.30
1943 4821 6.321181 ACAATATATCACTTTTGCCATTCCGT 59.679 34.615 0.00 0.00 0.00 4.69
1944 4822 4.637483 ATATCACTTTTGCCATTCCGTG 57.363 40.909 0.00 0.00 0.00 4.94
1952 4830 4.576993 CCATTCCGTGGCAAAAGC 57.423 55.556 0.00 0.00 42.12 3.51
1953 4831 1.664873 CCATTCCGTGGCAAAAGCA 59.335 52.632 0.00 0.00 42.12 3.91
1954 4832 0.033228 CCATTCCGTGGCAAAAGCAA 59.967 50.000 0.00 0.00 42.12 3.91
1955 4833 1.539929 CCATTCCGTGGCAAAAGCAAA 60.540 47.619 0.00 0.00 42.12 3.68
1956 4834 2.208431 CATTCCGTGGCAAAAGCAAAA 58.792 42.857 0.00 0.00 0.00 2.44
1957 4835 2.611225 TTCCGTGGCAAAAGCAAAAT 57.389 40.000 0.00 0.00 0.00 1.82
1958 4836 2.611225 TCCGTGGCAAAAGCAAAATT 57.389 40.000 0.00 0.00 0.00 1.82
1959 4837 2.911484 TCCGTGGCAAAAGCAAAATTT 58.089 38.095 0.00 0.00 0.00 1.82
1960 4838 3.274288 TCCGTGGCAAAAGCAAAATTTT 58.726 36.364 0.00 0.00 32.65 1.82
1961 4839 3.691609 TCCGTGGCAAAAGCAAAATTTTT 59.308 34.783 0.00 0.00 30.01 1.94
1962 4840 4.876107 TCCGTGGCAAAAGCAAAATTTTTA 59.124 33.333 0.00 0.00 30.01 1.52
1963 4841 5.007136 TCCGTGGCAAAAGCAAAATTTTTAG 59.993 36.000 0.00 0.00 30.01 1.85
1964 4842 5.007136 CCGTGGCAAAAGCAAAATTTTTAGA 59.993 36.000 0.00 0.00 30.01 2.10
1965 4843 6.128729 CGTGGCAAAAGCAAAATTTTTAGAG 58.871 36.000 0.00 0.00 30.01 2.43
1966 4844 6.238076 CGTGGCAAAAGCAAAATTTTTAGAGT 60.238 34.615 0.00 0.00 30.01 3.24
1967 4845 6.906678 GTGGCAAAAGCAAAATTTTTAGAGTG 59.093 34.615 0.00 0.00 30.01 3.51
1968 4846 6.038050 TGGCAAAAGCAAAATTTTTAGAGTGG 59.962 34.615 0.00 0.00 30.01 4.00
1969 4847 5.909054 GCAAAAGCAAAATTTTTAGAGTGGC 59.091 36.000 0.00 0.00 30.01 5.01
1970 4848 6.458070 GCAAAAGCAAAATTTTTAGAGTGGCA 60.458 34.615 0.00 0.00 30.01 4.92
1971 4849 7.470900 CAAAAGCAAAATTTTTAGAGTGGCAA 58.529 30.769 0.00 0.00 30.01 4.52
1972 4850 7.806409 AAAGCAAAATTTTTAGAGTGGCAAT 57.194 28.000 0.00 0.00 0.00 3.56
1973 4851 7.806409 AAGCAAAATTTTTAGAGTGGCAATT 57.194 28.000 0.00 0.00 0.00 2.32
1974 4852 7.806409 AGCAAAATTTTTAGAGTGGCAATTT 57.194 28.000 0.00 0.00 0.00 1.82
1975 4853 8.224389 AGCAAAATTTTTAGAGTGGCAATTTT 57.776 26.923 0.00 0.00 37.47 1.82
1981 4859 9.995003 AATTTTTAGAGTGGCAATTTTGATACA 57.005 25.926 0.00 0.00 0.00 2.29
1983 4861 9.995003 TTTTTAGAGTGGCAATTTTGATACATT 57.005 25.926 0.00 0.00 0.00 2.71
1984 4862 8.984891 TTTAGAGTGGCAATTTTGATACATTG 57.015 30.769 0.00 0.00 34.09 2.82
1985 4863 6.594788 AGAGTGGCAATTTTGATACATTGT 57.405 33.333 0.00 0.00 33.58 2.71
1986 4864 6.624423 AGAGTGGCAATTTTGATACATTGTC 58.376 36.000 0.00 0.00 35.85 3.18
1987 4865 6.209192 AGAGTGGCAATTTTGATACATTGTCA 59.791 34.615 0.00 0.00 41.58 3.58
1988 4866 6.757237 AGTGGCAATTTTGATACATTGTCAA 58.243 32.000 0.95 0.00 44.47 3.18
1989 4867 7.215789 AGTGGCAATTTTGATACATTGTCAAA 58.784 30.769 0.95 0.00 44.47 2.69
1998 4876 9.897744 TTTTGATACATTGTCAAAAGCTAAGAG 57.102 29.630 10.64 0.00 45.49 2.85
1999 4877 8.621532 TTGATACATTGTCAAAAGCTAAGAGT 57.378 30.769 0.00 0.00 32.98 3.24
2000 4878 8.032952 TGATACATTGTCAAAAGCTAAGAGTG 57.967 34.615 0.00 0.00 0.00 3.51
2001 4879 5.695851 ACATTGTCAAAAGCTAAGAGTGG 57.304 39.130 0.00 0.00 0.00 4.00
2002 4880 4.022849 ACATTGTCAAAAGCTAAGAGTGGC 60.023 41.667 0.00 0.00 0.00 5.01
2003 4881 3.207265 TGTCAAAAGCTAAGAGTGGCA 57.793 42.857 0.00 0.00 32.62 4.92
2004 4882 3.550820 TGTCAAAAGCTAAGAGTGGCAA 58.449 40.909 0.00 0.00 32.62 4.52
2005 4883 3.951037 TGTCAAAAGCTAAGAGTGGCAAA 59.049 39.130 0.00 0.00 32.62 3.68
2006 4884 4.400884 TGTCAAAAGCTAAGAGTGGCAAAA 59.599 37.500 0.00 0.00 32.62 2.44
2007 4885 5.105554 TGTCAAAAGCTAAGAGTGGCAAAAA 60.106 36.000 0.00 0.00 32.62 1.94
2008 4886 5.985530 GTCAAAAGCTAAGAGTGGCAAAAAT 59.014 36.000 0.00 0.00 32.62 1.82
2009 4887 7.145323 GTCAAAAGCTAAGAGTGGCAAAAATA 58.855 34.615 0.00 0.00 32.62 1.40
2010 4888 7.651704 GTCAAAAGCTAAGAGTGGCAAAAATAA 59.348 33.333 0.00 0.00 32.62 1.40
2011 4889 8.200792 TCAAAAGCTAAGAGTGGCAAAAATAAA 58.799 29.630 0.00 0.00 32.62 1.40
2012 4890 8.825745 CAAAAGCTAAGAGTGGCAAAAATAAAA 58.174 29.630 0.00 0.00 32.62 1.52
2013 4891 9.559732 AAAAGCTAAGAGTGGCAAAAATAAAAT 57.440 25.926 0.00 0.00 32.62 1.82
2014 4892 8.538409 AAGCTAAGAGTGGCAAAAATAAAATG 57.462 30.769 0.00 0.00 32.62 2.32
2015 4893 7.895759 AGCTAAGAGTGGCAAAAATAAAATGA 58.104 30.769 0.00 0.00 32.62 2.57
2016 4894 8.367156 AGCTAAGAGTGGCAAAAATAAAATGAA 58.633 29.630 0.00 0.00 32.62 2.57
2017 4895 8.987890 GCTAAGAGTGGCAAAAATAAAATGAAA 58.012 29.630 0.00 0.00 0.00 2.69
2042 4920 9.657419 AAATTTATCCTTTTTGCTACTGAATGG 57.343 29.630 0.00 0.00 0.00 3.16
2043 4921 4.725790 ATCCTTTTTGCTACTGAATGGC 57.274 40.909 0.00 0.00 34.76 4.40
2044 4922 3.495331 TCCTTTTTGCTACTGAATGGCA 58.505 40.909 0.00 0.00 44.21 4.92
2045 4923 4.088634 TCCTTTTTGCTACTGAATGGCAT 58.911 39.130 0.00 0.00 45.37 4.40
2046 4924 4.527816 TCCTTTTTGCTACTGAATGGCATT 59.472 37.500 13.54 13.54 45.37 3.56
2047 4925 5.011943 TCCTTTTTGCTACTGAATGGCATTT 59.988 36.000 14.93 0.79 45.37 2.32
2048 4926 5.121142 CCTTTTTGCTACTGAATGGCATTTG 59.879 40.000 14.93 12.60 45.37 2.32
2049 4927 4.870123 TTTGCTACTGAATGGCATTTGT 57.130 36.364 14.93 17.32 45.37 2.83
2050 4928 3.853831 TGCTACTGAATGGCATTTGTG 57.146 42.857 14.93 9.87 40.40 3.33
2051 4929 3.419943 TGCTACTGAATGGCATTTGTGA 58.580 40.909 14.93 0.25 40.40 3.58
2052 4930 4.018490 TGCTACTGAATGGCATTTGTGAT 58.982 39.130 14.93 1.82 40.40 3.06
2053 4931 4.142337 TGCTACTGAATGGCATTTGTGATG 60.142 41.667 14.93 11.41 40.40 3.07
2054 4932 4.142315 GCTACTGAATGGCATTTGTGATGT 60.142 41.667 14.93 9.37 34.21 3.06
2055 4933 5.066375 GCTACTGAATGGCATTTGTGATGTA 59.934 40.000 14.93 9.93 34.21 2.29
2056 4934 6.238842 GCTACTGAATGGCATTTGTGATGTAT 60.239 38.462 14.93 0.00 34.21 2.29
2057 4935 6.534475 ACTGAATGGCATTTGTGATGTATT 57.466 33.333 14.93 0.00 0.00 1.89
2058 4936 6.334989 ACTGAATGGCATTTGTGATGTATTG 58.665 36.000 14.93 0.00 0.00 1.90
2059 4937 6.071221 ACTGAATGGCATTTGTGATGTATTGT 60.071 34.615 14.93 0.00 0.00 2.71
2060 4938 6.331845 TGAATGGCATTTGTGATGTATTGTC 58.668 36.000 14.93 0.00 0.00 3.18
2061 4939 5.918426 ATGGCATTTGTGATGTATTGTCA 57.082 34.783 0.00 0.00 0.00 3.58
2062 4940 5.718724 TGGCATTTGTGATGTATTGTCAA 57.281 34.783 0.00 0.00 0.00 3.18
2063 4941 6.094193 TGGCATTTGTGATGTATTGTCAAA 57.906 33.333 0.00 0.00 33.61 2.69
2064 4942 6.519382 TGGCATTTGTGATGTATTGTCAAAA 58.481 32.000 0.00 0.00 32.99 2.44
2065 4943 6.423302 TGGCATTTGTGATGTATTGTCAAAAC 59.577 34.615 0.00 0.00 32.99 2.43
2066 4944 6.646240 GGCATTTGTGATGTATTGTCAAAACT 59.354 34.615 0.00 0.00 32.99 2.66
2067 4945 7.171337 GGCATTTGTGATGTATTGTCAAAACTT 59.829 33.333 0.00 0.00 32.99 2.66
2068 4946 9.190858 GCATTTGTGATGTATTGTCAAAACTTA 57.809 29.630 0.00 0.00 32.99 2.24
2073 4951 9.337396 TGTGATGTATTGTCAAAACTTAAGAGT 57.663 29.630 10.09 0.00 37.87 3.24
2074 4952 9.599322 GTGATGTATTGTCAAAACTTAAGAGTG 57.401 33.333 10.09 4.12 35.91 3.51
2075 4953 8.783093 TGATGTATTGTCAAAACTTAAGAGTGG 58.217 33.333 10.09 0.00 35.91 4.00
2076 4954 8.691661 ATGTATTGTCAAAACTTAAGAGTGGT 57.308 30.769 10.09 0.00 35.91 4.16
2077 4955 9.787435 ATGTATTGTCAAAACTTAAGAGTGGTA 57.213 29.630 10.09 0.00 35.91 3.25
2078 4956 9.048446 TGTATTGTCAAAACTTAAGAGTGGTAC 57.952 33.333 10.09 1.08 35.91 3.34
2079 4957 9.048446 GTATTGTCAAAACTTAAGAGTGGTACA 57.952 33.333 10.09 3.65 35.91 2.90
2080 4958 7.925043 TTGTCAAAACTTAAGAGTGGTACAA 57.075 32.000 10.09 9.20 44.16 2.41
2081 4959 7.548196 TGTCAAAACTTAAGAGTGGTACAAG 57.452 36.000 10.09 0.00 44.16 3.16
2082 4960 7.107542 TGTCAAAACTTAAGAGTGGTACAAGT 58.892 34.615 10.09 0.00 44.16 3.16
2083 4961 7.065324 TGTCAAAACTTAAGAGTGGTACAAGTG 59.935 37.037 10.09 0.00 44.16 3.16
2084 4962 7.279313 GTCAAAACTTAAGAGTGGTACAAGTGA 59.721 37.037 10.09 0.00 44.16 3.41
2085 4963 7.494625 TCAAAACTTAAGAGTGGTACAAGTGAG 59.505 37.037 10.09 0.00 44.16 3.51
2086 4964 6.726490 AACTTAAGAGTGGTACAAGTGAGA 57.274 37.500 10.09 0.00 44.16 3.27
2087 4965 6.919775 ACTTAAGAGTGGTACAAGTGAGAT 57.080 37.500 10.09 0.00 44.16 2.75
2088 4966 6.692486 ACTTAAGAGTGGTACAAGTGAGATG 58.308 40.000 10.09 0.00 44.16 2.90
2089 4967 6.267928 ACTTAAGAGTGGTACAAGTGAGATGT 59.732 38.462 10.09 0.00 44.16 3.06
2090 4968 5.552870 AAGAGTGGTACAAGTGAGATGTT 57.447 39.130 0.00 0.00 44.16 2.71
2091 4969 6.665992 AAGAGTGGTACAAGTGAGATGTTA 57.334 37.500 0.00 0.00 44.16 2.41
2092 4970 6.665992 AGAGTGGTACAAGTGAGATGTTAA 57.334 37.500 0.00 0.00 44.16 2.01
2093 4971 7.062749 AGAGTGGTACAAGTGAGATGTTAAA 57.937 36.000 0.00 0.00 44.16 1.52
2094 4972 7.680730 AGAGTGGTACAAGTGAGATGTTAAAT 58.319 34.615 0.00 0.00 44.16 1.40
2095 4973 8.157476 AGAGTGGTACAAGTGAGATGTTAAATT 58.843 33.333 0.00 0.00 44.16 1.82
2096 4974 8.324163 AGTGGTACAAGTGAGATGTTAAATTC 57.676 34.615 0.00 0.00 44.16 2.17
2097 4975 8.157476 AGTGGTACAAGTGAGATGTTAAATTCT 58.843 33.333 0.00 0.00 44.16 2.40
2098 4976 9.431887 GTGGTACAAGTGAGATGTTAAATTCTA 57.568 33.333 0.00 0.00 44.16 2.10
2099 4977 9.653287 TGGTACAAGTGAGATGTTAAATTCTAG 57.347 33.333 0.00 0.00 31.92 2.43
2100 4978 9.871238 GGTACAAGTGAGATGTTAAATTCTAGA 57.129 33.333 0.00 0.00 32.27 2.43
2103 4981 9.429359 ACAAGTGAGATGTTAAATTCTAGAGTG 57.571 33.333 0.00 0.00 0.00 3.51
2104 4982 9.645059 CAAGTGAGATGTTAAATTCTAGAGTGA 57.355 33.333 0.00 0.00 0.00 3.41
2105 4983 9.646427 AAGTGAGATGTTAAATTCTAGAGTGAC 57.354 33.333 0.00 0.00 0.00 3.67
2106 4984 8.807118 AGTGAGATGTTAAATTCTAGAGTGACA 58.193 33.333 0.00 0.00 0.00 3.58
2107 4985 9.593134 GTGAGATGTTAAATTCTAGAGTGACAT 57.407 33.333 10.12 10.12 0.00 3.06
2120 4998 8.718102 TCTAGAGTGACATAAGTAAAATTGGC 57.282 34.615 0.00 0.00 0.00 4.52
2121 4999 8.318412 TCTAGAGTGACATAAGTAAAATTGGCA 58.682 33.333 0.00 0.00 0.00 4.92
2122 5000 7.759489 AGAGTGACATAAGTAAAATTGGCAA 57.241 32.000 0.68 0.68 0.00 4.52
2123 5001 8.177119 AGAGTGACATAAGTAAAATTGGCAAA 57.823 30.769 3.01 0.00 0.00 3.68
2124 5002 8.637986 AGAGTGACATAAGTAAAATTGGCAAAA 58.362 29.630 3.01 0.00 0.00 2.44
2125 5003 8.816640 AGTGACATAAGTAAAATTGGCAAAAG 57.183 30.769 3.01 0.00 0.00 2.27
2126 5004 7.384932 AGTGACATAAGTAAAATTGGCAAAAGC 59.615 33.333 3.01 0.00 0.00 3.51
2127 5005 7.384932 GTGACATAAGTAAAATTGGCAAAAGCT 59.615 33.333 3.01 0.00 0.00 3.74
2128 5006 8.580720 TGACATAAGTAAAATTGGCAAAAGCTA 58.419 29.630 3.01 0.00 0.00 3.32
2129 5007 8.986477 ACATAAGTAAAATTGGCAAAAGCTAG 57.014 30.769 3.01 0.00 0.00 3.42
2130 5008 8.802267 ACATAAGTAAAATTGGCAAAAGCTAGA 58.198 29.630 3.01 0.00 0.00 2.43
2131 5009 9.294030 CATAAGTAAAATTGGCAAAAGCTAGAG 57.706 33.333 3.01 0.00 0.00 2.43
2132 5010 6.901081 AGTAAAATTGGCAAAAGCTAGAGT 57.099 33.333 3.01 0.00 0.00 3.24
2133 5011 6.681777 AGTAAAATTGGCAAAAGCTAGAGTG 58.318 36.000 3.01 0.00 0.00 3.51
2134 5012 5.789643 AAAATTGGCAAAAGCTAGAGTGA 57.210 34.783 3.01 0.00 0.00 3.41
2135 5013 4.773323 AATTGGCAAAAGCTAGAGTGAC 57.227 40.909 3.01 0.00 0.00 3.67
2136 5014 2.928801 TGGCAAAAGCTAGAGTGACA 57.071 45.000 0.00 0.00 0.00 3.58
2137 5015 3.207265 TGGCAAAAGCTAGAGTGACAA 57.793 42.857 0.00 0.00 0.00 3.18
2138 5016 3.550820 TGGCAAAAGCTAGAGTGACAAA 58.449 40.909 0.00 0.00 0.00 2.83
2139 5017 3.951037 TGGCAAAAGCTAGAGTGACAAAA 59.049 39.130 0.00 0.00 0.00 2.44
2140 5018 4.400884 TGGCAAAAGCTAGAGTGACAAAAA 59.599 37.500 0.00 0.00 0.00 1.94
2141 5019 4.740205 GGCAAAAGCTAGAGTGACAAAAAC 59.260 41.667 0.00 0.00 0.00 2.43
2142 5020 5.339990 GCAAAAGCTAGAGTGACAAAAACA 58.660 37.500 0.00 0.00 0.00 2.83
2143 5021 5.804979 GCAAAAGCTAGAGTGACAAAAACAA 59.195 36.000 0.00 0.00 0.00 2.83
2144 5022 6.310224 GCAAAAGCTAGAGTGACAAAAACAAA 59.690 34.615 0.00 0.00 0.00 2.83
2145 5023 7.463251 GCAAAAGCTAGAGTGACAAAAACAAAG 60.463 37.037 0.00 0.00 0.00 2.77
2146 5024 6.759497 AAGCTAGAGTGACAAAAACAAAGT 57.241 33.333 0.00 0.00 0.00 2.66
2147 5025 6.759497 AGCTAGAGTGACAAAAACAAAGTT 57.241 33.333 0.00 0.00 0.00 2.66
2148 5026 7.158099 AGCTAGAGTGACAAAAACAAAGTTT 57.842 32.000 0.00 0.00 0.00 2.66
2149 5027 7.602753 AGCTAGAGTGACAAAAACAAAGTTTT 58.397 30.769 0.00 2.26 0.00 2.43
2150 5028 7.755373 AGCTAGAGTGACAAAAACAAAGTTTTC 59.245 33.333 8.16 0.00 0.00 2.29
2151 5029 7.009265 GCTAGAGTGACAAAAACAAAGTTTTCC 59.991 37.037 8.16 3.00 0.00 3.13
2152 5030 6.993079 AGAGTGACAAAAACAAAGTTTTCCT 58.007 32.000 8.16 0.00 0.00 3.36
2153 5031 7.441836 AGAGTGACAAAAACAAAGTTTTCCTT 58.558 30.769 8.16 0.00 33.79 3.36
2154 5032 7.931407 AGAGTGACAAAAACAAAGTTTTCCTTT 59.069 29.630 8.16 0.00 44.30 3.11
2155 5033 8.445275 AGTGACAAAAACAAAGTTTTCCTTTT 57.555 26.923 8.16 0.00 41.51 2.27
2156 5034 8.341903 AGTGACAAAAACAAAGTTTTCCTTTTG 58.658 29.630 17.18 17.18 41.51 2.44
2157 5035 8.338986 GTGACAAAAACAAAGTTTTCCTTTTGA 58.661 29.630 21.81 7.86 41.51 2.69
2158 5036 8.893727 TGACAAAAACAAAGTTTTCCTTTTGAA 58.106 25.926 21.81 12.89 41.51 2.69
2302 5180 3.455910 TCAAGCCAGCAGAGGTATGTATT 59.544 43.478 0.00 0.00 0.00 1.89
2311 5354 7.389232 CAGCAGAGGTATGTATTATCATCCAA 58.611 38.462 0.00 0.00 0.00 3.53
2356 5399 0.099968 CCATGCAATTCAGACTGCCG 59.900 55.000 0.00 0.00 37.79 5.69
2368 5411 3.192001 TCAGACTGCCGTTAAACGTCTAT 59.808 43.478 0.00 0.00 40.58 1.98
2424 5467 6.766467 CAGGTTATTGGGATCTTACAAGGTAC 59.234 42.308 0.00 0.00 0.00 3.34
2426 5469 6.766467 GGTTATTGGGATCTTACAAGGTACTG 59.234 42.308 0.00 0.00 40.86 2.74
2427 5470 7.336396 GTTATTGGGATCTTACAAGGTACTGT 58.664 38.462 0.00 0.00 40.86 3.55
2428 5471 8.480501 GTTATTGGGATCTTACAAGGTACTGTA 58.519 37.037 0.00 0.00 40.86 2.74
2548 5592 6.967199 GGATTTTCACATTTTATCTCGGTGAC 59.033 38.462 0.00 0.00 38.13 3.67
2716 5760 1.006805 CGCCTCCTCTAAGCCGATG 60.007 63.158 0.00 0.00 0.00 3.84
2797 5841 2.499197 TGTTGCAAGCGGAATTGACTA 58.501 42.857 0.00 0.00 31.55 2.59
2825 5869 1.674764 CTGCGTGCAGGAGAGAGGAT 61.675 60.000 14.00 0.00 41.23 3.24
2984 6028 3.195610 ACGACCTGCTCAACTGATGATAA 59.804 43.478 0.00 0.00 37.44 1.75
3038 6082 6.659745 ATATGCAGTTTGCCACATTGATAT 57.340 33.333 0.00 0.00 44.23 1.63
3039 6083 7.764141 ATATGCAGTTTGCCACATTGATATA 57.236 32.000 0.00 0.00 44.23 0.86
3040 6084 5.911378 TGCAGTTTGCCACATTGATATAA 57.089 34.783 0.00 0.00 44.23 0.98
3170 6226 7.610305 TGTAAACTTAAAGCATCTTCCCCTAAG 59.390 37.037 0.00 0.00 36.45 2.18
3207 6263 5.578157 ACCACCTCCTACAAATTAACACT 57.422 39.130 0.00 0.00 0.00 3.55
3296 6352 9.096823 TCCTAGATAGTTTTCTCACCAAGTTTA 57.903 33.333 0.00 0.00 0.00 2.01
3376 6432 1.386525 GCCCACACGCATGGATCAAT 61.387 55.000 7.11 0.00 43.02 2.57
3483 6540 4.368808 CGCCCACACGCTCGTTTG 62.369 66.667 1.95 1.95 0.00 2.93
3548 6608 1.003972 CACGTCAGTTTTCACGCACAT 60.004 47.619 0.00 0.00 39.73 3.21
3549 6609 1.003972 ACGTCAGTTTTCACGCACATG 60.004 47.619 0.00 0.00 39.73 3.21
3562 6622 4.052518 ACATGGAGGGGCTGGTGC 62.053 66.667 0.00 0.00 38.76 5.01
3574 6634 2.666862 TGGTGCGTGGGCGTTTAG 60.667 61.111 0.00 0.00 44.10 1.85
3669 6730 1.073199 AACTGCCCTAGCGTGCTTT 59.927 52.632 0.00 0.00 44.31 3.51
3689 6750 6.163159 CTTTGTAAGCAGATGACAACTCTC 57.837 41.667 0.00 0.00 32.98 3.20
3730 6796 3.291584 TGTGTTTTTGCAGGGTACATGA 58.708 40.909 0.00 0.00 0.00 3.07
3776 6842 4.450053 GCAGATGGCAACTCTCTCTTTAT 58.550 43.478 0.00 0.00 43.97 1.40
3782 6848 4.162320 TGGCAACTCTCTCTTTATCCGAAT 59.838 41.667 0.00 0.00 37.61 3.34
3843 6917 5.710984 CAACTGTCTAGTGTTAGTAGTGGG 58.289 45.833 0.00 0.00 37.19 4.61
3980 7055 4.968259 AGCAACCATGACAACTGTAGTTA 58.032 39.130 0.00 0.00 36.32 2.24
4038 7114 4.750952 TGCGATTAAACGAACATGGAAA 57.249 36.364 9.53 0.00 35.09 3.13
4093 7169 0.867746 TGACTGTCACGCAAAGCATC 59.132 50.000 6.36 0.00 0.00 3.91
4095 7171 0.250467 ACTGTCACGCAAAGCATCCT 60.250 50.000 0.00 0.00 0.00 3.24
4129 7205 0.594284 GACGTGTGGGCGCTATCTAC 60.594 60.000 7.64 0.00 34.88 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 25 2.552743 GTTGTCCAAGGAAGCTAACACC 59.447 50.000 0.00 0.00 0.00 4.16
24 26 3.211045 TGTTGTCCAAGGAAGCTAACAC 58.789 45.455 0.00 0.00 0.00 3.32
44 46 7.834068 ATAGTACCGCAAAATGCTATATCTG 57.166 36.000 0.43 0.00 42.25 2.90
49 51 5.067153 TGCAAATAGTACCGCAAAATGCTAT 59.933 36.000 0.43 0.00 42.25 2.97
85 87 2.625639 AGAGAGGAGGTTGTGAATGGT 58.374 47.619 0.00 0.00 0.00 3.55
173 175 2.000447 GATGACGGTGAGCTACAAACC 59.000 52.381 0.00 0.00 0.00 3.27
188 190 4.458989 TGCTGGAACCATTAAACTGATGAC 59.541 41.667 0.00 0.00 0.00 3.06
191 193 6.418057 TTTTGCTGGAACCATTAAACTGAT 57.582 33.333 0.00 0.00 0.00 2.90
217 219 3.219281 ACAAAATGCTACAACCGTCCTT 58.781 40.909 0.00 0.00 0.00 3.36
218 220 2.858745 ACAAAATGCTACAACCGTCCT 58.141 42.857 0.00 0.00 0.00 3.85
219 221 3.120095 GGTACAAAATGCTACAACCGTCC 60.120 47.826 0.00 0.00 0.00 4.79
220 222 3.499157 TGGTACAAAATGCTACAACCGTC 59.501 43.478 0.00 0.00 31.92 4.79
221 223 3.251487 GTGGTACAAAATGCTACAACCGT 59.749 43.478 0.00 0.00 44.16 4.83
222 224 3.500680 AGTGGTACAAAATGCTACAACCG 59.499 43.478 0.00 0.00 44.16 4.44
223 225 4.320935 CCAGTGGTACAAAATGCTACAACC 60.321 45.833 0.00 0.00 44.16 3.77
224 226 4.277423 ACCAGTGGTACAAAATGCTACAAC 59.723 41.667 14.87 0.00 44.16 3.32
225 227 4.465886 ACCAGTGGTACAAAATGCTACAA 58.534 39.130 14.87 0.00 44.16 2.41
226 228 4.093472 ACCAGTGGTACAAAATGCTACA 57.907 40.909 14.87 0.00 44.16 2.74
227 229 4.794169 CAACCAGTGGTACAAAATGCTAC 58.206 43.478 17.09 0.00 44.16 3.58
228 230 3.254657 GCAACCAGTGGTACAAAATGCTA 59.745 43.478 21.82 0.00 44.16 3.49
229 231 2.035832 GCAACCAGTGGTACAAAATGCT 59.964 45.455 21.82 0.00 44.16 3.79
230 232 2.223923 TGCAACCAGTGGTACAAAATGC 60.224 45.455 22.16 22.16 44.16 3.56
231 233 3.641648 CTGCAACCAGTGGTACAAAATG 58.358 45.455 17.09 10.23 44.16 2.32
232 234 2.035832 GCTGCAACCAGTGGTACAAAAT 59.964 45.455 17.09 0.00 44.16 1.82
233 235 1.407258 GCTGCAACCAGTGGTACAAAA 59.593 47.619 17.09 0.00 44.16 2.44
234 236 1.028905 GCTGCAACCAGTGGTACAAA 58.971 50.000 17.09 0.82 44.16 2.83
235 237 0.182537 AGCTGCAACCAGTGGTACAA 59.817 50.000 17.09 2.77 44.16 2.41
236 238 0.250295 GAGCTGCAACCAGTGGTACA 60.250 55.000 17.09 15.96 41.26 2.90
237 239 0.955919 GGAGCTGCAACCAGTGGTAC 60.956 60.000 17.09 11.81 41.26 3.34
238 240 1.374947 GGAGCTGCAACCAGTGGTA 59.625 57.895 17.09 0.00 41.26 3.25
239 241 2.072874 ATGGAGCTGCAACCAGTGGT 62.073 55.000 13.45 9.70 41.26 4.16
240 242 1.303888 ATGGAGCTGCAACCAGTGG 60.304 57.895 13.45 7.91 41.26 4.00
241 243 1.642037 CGATGGAGCTGCAACCAGTG 61.642 60.000 13.45 12.54 41.26 3.66
242 244 1.376424 CGATGGAGCTGCAACCAGT 60.376 57.895 13.45 0.00 41.26 4.00
243 245 1.078918 TCGATGGAGCTGCAACCAG 60.079 57.895 13.45 4.13 39.62 4.00
244 246 1.375908 GTCGATGGAGCTGCAACCA 60.376 57.895 13.45 17.82 40.57 3.67
245 247 1.078848 AGTCGATGGAGCTGCAACC 60.079 57.895 13.45 6.46 0.00 3.77
246 248 0.671781 ACAGTCGATGGAGCTGCAAC 60.672 55.000 13.45 9.03 33.87 4.17
247 249 0.390340 GACAGTCGATGGAGCTGCAA 60.390 55.000 13.45 0.00 33.87 4.08
248 250 1.216444 GACAGTCGATGGAGCTGCA 59.784 57.895 11.44 11.44 33.87 4.41
249 251 1.875813 CGACAGTCGATGGAGCTGC 60.876 63.158 18.63 0.00 43.74 5.25
250 252 0.109086 AACGACAGTCGATGGAGCTG 60.109 55.000 29.53 0.00 43.74 4.24
251 253 0.603569 AAACGACAGTCGATGGAGCT 59.396 50.000 29.53 1.69 43.74 4.09
252 254 0.716108 CAAACGACAGTCGATGGAGC 59.284 55.000 29.53 0.00 43.74 4.70
253 255 2.065993 ACAAACGACAGTCGATGGAG 57.934 50.000 29.53 15.15 43.74 3.86
254 256 2.670229 GCTACAAACGACAGTCGATGGA 60.670 50.000 29.53 20.95 43.74 3.41
255 257 1.654105 GCTACAAACGACAGTCGATGG 59.346 52.381 29.53 17.78 43.74 3.51
256 258 2.594654 GAGCTACAAACGACAGTCGATG 59.405 50.000 29.53 25.63 43.74 3.84
257 259 2.228103 TGAGCTACAAACGACAGTCGAT 59.772 45.455 29.53 15.48 43.74 3.59
258 260 1.605232 TGAGCTACAAACGACAGTCGA 59.395 47.619 29.53 5.51 43.74 4.20
259 261 1.714460 GTGAGCTACAAACGACAGTCG 59.286 52.381 21.62 21.62 46.93 4.18
260 262 2.059541 GGTGAGCTACAAACGACAGTC 58.940 52.381 0.00 0.00 0.00 3.51
261 263 1.602165 CGGTGAGCTACAAACGACAGT 60.602 52.381 0.00 0.00 34.57 3.55
262 264 1.060713 CGGTGAGCTACAAACGACAG 58.939 55.000 0.00 0.00 34.57 3.51
263 265 0.386476 ACGGTGAGCTACAAACGACA 59.614 50.000 7.87 0.00 35.88 4.35
264 266 1.058404 GACGGTGAGCTACAAACGAC 58.942 55.000 7.87 0.00 35.88 4.34
265 267 0.669619 TGACGGTGAGCTACAAACGA 59.330 50.000 7.87 0.00 35.88 3.85
266 268 1.654105 GATGACGGTGAGCTACAAACG 59.346 52.381 0.00 0.00 37.24 3.60
267 269 2.412089 GTGATGACGGTGAGCTACAAAC 59.588 50.000 0.00 0.00 0.00 2.93
268 270 2.299013 AGTGATGACGGTGAGCTACAAA 59.701 45.455 0.00 0.00 0.00 2.83
269 271 1.893137 AGTGATGACGGTGAGCTACAA 59.107 47.619 0.00 0.00 0.00 2.41
270 272 1.545841 AGTGATGACGGTGAGCTACA 58.454 50.000 0.00 0.00 0.00 2.74
271 273 2.656560 AAGTGATGACGGTGAGCTAC 57.343 50.000 0.00 0.00 0.00 3.58
272 274 4.794278 TTAAAGTGATGACGGTGAGCTA 57.206 40.909 0.00 0.00 0.00 3.32
273 275 3.678056 TTAAAGTGATGACGGTGAGCT 57.322 42.857 0.00 0.00 0.00 4.09
274 276 3.063997 CCATTAAAGTGATGACGGTGAGC 59.936 47.826 0.00 0.00 0.00 4.26
275 277 4.253685 ACCATTAAAGTGATGACGGTGAG 58.746 43.478 0.00 0.00 0.00 3.51
276 278 4.280436 ACCATTAAAGTGATGACGGTGA 57.720 40.909 0.00 0.00 0.00 4.02
277 279 4.142687 GGAACCATTAAAGTGATGACGGTG 60.143 45.833 0.00 0.00 0.00 4.94
278 280 4.007659 GGAACCATTAAAGTGATGACGGT 58.992 43.478 0.00 0.00 0.00 4.83
279 281 4.006989 TGGAACCATTAAAGTGATGACGG 58.993 43.478 0.00 0.00 0.00 4.79
280 282 4.437390 GCTGGAACCATTAAAGTGATGACG 60.437 45.833 0.00 0.00 0.00 4.35
281 283 4.458989 TGCTGGAACCATTAAAGTGATGAC 59.541 41.667 0.00 0.00 0.00 3.06
282 284 4.661222 TGCTGGAACCATTAAAGTGATGA 58.339 39.130 0.00 0.00 0.00 2.92
283 285 5.389859 TTGCTGGAACCATTAAAGTGATG 57.610 39.130 0.00 0.00 0.00 3.07
284 286 6.418057 TTTTGCTGGAACCATTAAAGTGAT 57.582 33.333 0.00 0.00 0.00 3.06
285 287 5.860941 TTTTGCTGGAACCATTAAAGTGA 57.139 34.783 0.00 0.00 0.00 3.41
305 307 4.870221 ACGCTACGAACAACTTCTTTTT 57.130 36.364 0.00 0.00 0.00 1.94
306 308 4.870221 AACGCTACGAACAACTTCTTTT 57.130 36.364 0.00 0.00 0.00 2.27
307 309 4.093850 ACAAACGCTACGAACAACTTCTTT 59.906 37.500 0.00 0.00 0.00 2.52
462 465 1.192146 ACAAGGCCTTGCTCGTAGGA 61.192 55.000 39.52 0.00 44.03 2.94
467 470 0.169672 CATGAACAAGGCCTTGCTCG 59.830 55.000 39.52 23.31 44.03 5.03
506 510 3.677121 CACTCAGTTCCTTCATCTTCACG 59.323 47.826 0.00 0.00 0.00 4.35
508 512 5.752036 ATCACTCAGTTCCTTCATCTTCA 57.248 39.130 0.00 0.00 0.00 3.02
568 572 1.969589 CGTTTTCCCACCTTCCCCG 60.970 63.158 0.00 0.00 0.00 5.73
594 598 3.844640 CTTCCCTCTTTTCCCTTTCCAA 58.155 45.455 0.00 0.00 0.00 3.53
653 669 4.138109 CGCCGGCCGAAACGTTAC 62.138 66.667 30.73 4.02 40.02 2.50
665 681 2.331893 TTTTCATCTGGTGCGCCGG 61.332 57.895 19.68 19.68 42.59 6.13
666 682 1.154225 GTTTTCATCTGGTGCGCCG 60.154 57.895 12.58 6.81 37.67 6.46
667 683 1.154225 CGTTTTCATCTGGTGCGCC 60.154 57.895 10.11 10.11 0.00 6.53
668 684 0.040425 AACGTTTTCATCTGGTGCGC 60.040 50.000 0.00 0.00 0.00 6.09
680 705 6.708502 CCCATAATTTCCAAGGAAAACGTTTT 59.291 34.615 25.46 25.46 45.60 2.43
689 714 2.517980 CCCCTCCCATAATTTCCAAGGA 59.482 50.000 0.00 0.00 0.00 3.36
782 3654 2.111043 CAGGTGCGGACCACTGTT 59.889 61.111 28.90 3.54 45.98 3.16
852 3724 0.679505 TGGACACTCTGCCTACACAC 59.320 55.000 0.00 0.00 0.00 3.82
853 3725 0.969149 CTGGACACTCTGCCTACACA 59.031 55.000 0.00 0.00 0.00 3.72
894 3766 2.356665 TTTTTGTGGCTGAGGCAGTA 57.643 45.000 9.68 0.00 39.19 2.74
1322 4199 6.183360 CCCCAAGTGTCTAATTTCTTTTGTGT 60.183 38.462 0.00 0.00 0.00 3.72
1363 4241 6.656902 AGCCAATCATCTTTCATTCAGACTA 58.343 36.000 0.00 0.00 0.00 2.59
1381 4259 1.829222 CCAGCAAAATGAGGAGCCAAT 59.171 47.619 0.00 0.00 0.00 3.16
1382 4260 1.259609 CCAGCAAAATGAGGAGCCAA 58.740 50.000 0.00 0.00 0.00 4.52
1383 4261 0.112995 ACCAGCAAAATGAGGAGCCA 59.887 50.000 0.00 0.00 0.00 4.75
1384 4262 2.128771 TACCAGCAAAATGAGGAGCC 57.871 50.000 0.00 0.00 0.00 4.70
1385 4263 4.725790 ATTTACCAGCAAAATGAGGAGC 57.274 40.909 0.00 0.00 0.00 4.70
1386 4264 5.870978 CCAAATTTACCAGCAAAATGAGGAG 59.129 40.000 0.00 0.00 0.00 3.69
1387 4265 5.541868 TCCAAATTTACCAGCAAAATGAGGA 59.458 36.000 0.00 0.00 32.27 3.71
1388 4266 5.792741 TCCAAATTTACCAGCAAAATGAGG 58.207 37.500 0.00 0.00 0.00 3.86
1389 4267 7.098477 TCATCCAAATTTACCAGCAAAATGAG 58.902 34.615 0.00 0.00 0.00 2.90
1390 4268 7.002250 TCATCCAAATTTACCAGCAAAATGA 57.998 32.000 0.00 0.00 0.00 2.57
1391 4269 7.852971 ATCATCCAAATTTACCAGCAAAATG 57.147 32.000 0.00 0.00 0.00 2.32
1392 4270 7.337436 CCAATCATCCAAATTTACCAGCAAAAT 59.663 33.333 0.00 0.00 0.00 1.82
1393 4271 6.654161 CCAATCATCCAAATTTACCAGCAAAA 59.346 34.615 0.00 0.00 0.00 2.44
1403 4281 4.098894 ACCTGAGCCAATCATCCAAATTT 58.901 39.130 0.00 0.00 37.28 1.82
1483 4361 1.431036 GCGCATGAAGAAAGAGCCC 59.569 57.895 0.30 0.00 0.00 5.19
1602 4480 4.277174 TCCGCTGCTCATTAAACTGAAAAA 59.723 37.500 0.00 0.00 0.00 1.94
1656 4534 7.394016 AGAGGACACACATCATGTATTTGTTA 58.606 34.615 0.00 0.00 40.64 2.41
1657 4535 6.240894 AGAGGACACACATCATGTATTTGTT 58.759 36.000 0.00 0.00 40.64 2.83
1658 4536 5.809001 AGAGGACACACATCATGTATTTGT 58.191 37.500 0.00 0.00 40.64 2.83
1659 4537 6.748333 AAGAGGACACACATCATGTATTTG 57.252 37.500 0.00 0.00 40.64 2.32
1660 4538 7.231317 ACAAAAGAGGACACACATCATGTATTT 59.769 33.333 0.00 0.00 40.64 1.40
1661 4539 6.716628 ACAAAAGAGGACACACATCATGTATT 59.283 34.615 0.00 0.00 40.64 1.89
1662 4540 6.240894 ACAAAAGAGGACACACATCATGTAT 58.759 36.000 0.00 0.00 40.64 2.29
1663 4541 5.620206 ACAAAAGAGGACACACATCATGTA 58.380 37.500 0.00 0.00 40.64 2.29
1664 4542 4.464008 ACAAAAGAGGACACACATCATGT 58.536 39.130 0.00 0.00 44.81 3.21
1665 4543 5.443185 AACAAAAGAGGACACACATCATG 57.557 39.130 0.00 0.00 0.00 3.07
1666 4544 5.593909 TCAAACAAAAGAGGACACACATCAT 59.406 36.000 0.00 0.00 0.00 2.45
1667 4545 4.946772 TCAAACAAAAGAGGACACACATCA 59.053 37.500 0.00 0.00 0.00 3.07
1668 4546 5.273944 GTCAAACAAAAGAGGACACACATC 58.726 41.667 0.00 0.00 0.00 3.06
1669 4547 4.097892 GGTCAAACAAAAGAGGACACACAT 59.902 41.667 0.00 0.00 0.00 3.21
1670 4548 3.442273 GGTCAAACAAAAGAGGACACACA 59.558 43.478 0.00 0.00 0.00 3.72
1671 4549 3.442273 TGGTCAAACAAAAGAGGACACAC 59.558 43.478 0.00 0.00 0.00 3.82
1672 4550 3.691575 TGGTCAAACAAAAGAGGACACA 58.308 40.909 0.00 0.00 0.00 3.72
1673 4551 4.712122 TTGGTCAAACAAAAGAGGACAC 57.288 40.909 0.00 0.00 0.00 3.67
1674 4552 5.930837 AATTGGTCAAACAAAAGAGGACA 57.069 34.783 0.00 0.00 33.48 4.02
1675 4553 6.573434 AGAAATTGGTCAAACAAAAGAGGAC 58.427 36.000 0.00 0.00 33.48 3.85
1676 4554 6.183360 GGAGAAATTGGTCAAACAAAAGAGGA 60.183 38.462 0.00 0.00 33.48 3.71
1677 4555 5.985530 GGAGAAATTGGTCAAACAAAAGAGG 59.014 40.000 0.00 0.00 33.48 3.69
1678 4556 6.572519 TGGAGAAATTGGTCAAACAAAAGAG 58.427 36.000 0.00 0.00 33.48 2.85
1679 4557 6.537453 TGGAGAAATTGGTCAAACAAAAGA 57.463 33.333 0.00 0.00 33.48 2.52
1680 4558 6.985645 TCATGGAGAAATTGGTCAAACAAAAG 59.014 34.615 0.00 0.00 33.48 2.27
1681 4559 6.882656 TCATGGAGAAATTGGTCAAACAAAA 58.117 32.000 0.00 0.00 33.48 2.44
1682 4560 6.477053 TCATGGAGAAATTGGTCAAACAAA 57.523 33.333 0.00 0.00 33.48 2.83
1797 4675 3.695830 TGCCAAACTTACCAGGTAGAG 57.304 47.619 0.00 3.68 0.00 2.43
1840 4718 5.424757 AGTAGGCAAAAACAAAGTTTTCCC 58.575 37.500 8.16 11.02 0.00 3.97
1841 4719 6.978343 AAGTAGGCAAAAACAAAGTTTTCC 57.022 33.333 8.16 6.65 0.00 3.13
1842 4720 6.740905 GCAAAGTAGGCAAAAACAAAGTTTTC 59.259 34.615 8.16 0.00 0.00 2.29
1843 4721 6.429692 AGCAAAGTAGGCAAAAACAAAGTTTT 59.570 30.769 2.26 2.26 0.00 2.43
1844 4722 5.937540 AGCAAAGTAGGCAAAAACAAAGTTT 59.062 32.000 0.00 0.00 0.00 2.66
1845 4723 5.487433 AGCAAAGTAGGCAAAAACAAAGTT 58.513 33.333 0.00 0.00 0.00 2.66
1846 4724 5.084818 AGCAAAGTAGGCAAAAACAAAGT 57.915 34.783 0.00 0.00 0.00 2.66
1847 4725 7.224557 ACATAAGCAAAGTAGGCAAAAACAAAG 59.775 33.333 0.00 0.00 0.00 2.77
1848 4726 7.044798 ACATAAGCAAAGTAGGCAAAAACAAA 58.955 30.769 0.00 0.00 0.00 2.83
1849 4727 6.578023 ACATAAGCAAAGTAGGCAAAAACAA 58.422 32.000 0.00 0.00 0.00 2.83
1850 4728 6.155475 ACATAAGCAAAGTAGGCAAAAACA 57.845 33.333 0.00 0.00 0.00 2.83
1851 4729 6.212955 TGACATAAGCAAAGTAGGCAAAAAC 58.787 36.000 0.00 0.00 0.00 2.43
1852 4730 6.398234 TGACATAAGCAAAGTAGGCAAAAA 57.602 33.333 0.00 0.00 0.00 1.94
1853 4731 6.588719 ATGACATAAGCAAAGTAGGCAAAA 57.411 33.333 0.00 0.00 0.00 2.44
1854 4732 6.588719 AATGACATAAGCAAAGTAGGCAAA 57.411 33.333 0.00 0.00 0.00 3.68
1855 4733 6.588719 AAATGACATAAGCAAAGTAGGCAA 57.411 33.333 0.00 0.00 0.00 4.52
1856 4734 6.588719 AAAATGACATAAGCAAAGTAGGCA 57.411 33.333 0.00 0.00 0.00 4.75
1857 4735 7.985476 TCTAAAATGACATAAGCAAAGTAGGC 58.015 34.615 0.00 0.00 0.00 3.93
1880 4758 9.341078 ACTGGCAAAAATAAAATGTCAAATTCT 57.659 25.926 0.00 0.00 0.00 2.40
1881 4759 9.949174 AACTGGCAAAAATAAAATGTCAAATTC 57.051 25.926 0.00 0.00 0.00 2.17
1886 4764 8.555361 GCTAAAACTGGCAAAAATAAAATGTCA 58.445 29.630 0.00 0.00 0.00 3.58
1887 4765 8.773645 AGCTAAAACTGGCAAAAATAAAATGTC 58.226 29.630 0.00 0.00 0.00 3.06
1888 4766 8.675705 AGCTAAAACTGGCAAAAATAAAATGT 57.324 26.923 0.00 0.00 0.00 2.71
1889 4767 9.949174 AAAGCTAAAACTGGCAAAAATAAAATG 57.051 25.926 0.00 0.00 0.00 2.32
1891 4769 9.780413 CAAAAGCTAAAACTGGCAAAAATAAAA 57.220 25.926 0.00 0.00 0.00 1.52
1892 4770 9.167311 TCAAAAGCTAAAACTGGCAAAAATAAA 57.833 25.926 0.00 0.00 0.00 1.40
1893 4771 8.608317 GTCAAAAGCTAAAACTGGCAAAAATAA 58.392 29.630 0.00 0.00 0.00 1.40
1894 4772 7.766278 TGTCAAAAGCTAAAACTGGCAAAAATA 59.234 29.630 0.00 0.00 0.00 1.40
1895 4773 6.597280 TGTCAAAAGCTAAAACTGGCAAAAAT 59.403 30.769 0.00 0.00 0.00 1.82
1896 4774 5.934625 TGTCAAAAGCTAAAACTGGCAAAAA 59.065 32.000 0.00 0.00 0.00 1.94
1897 4775 5.482908 TGTCAAAAGCTAAAACTGGCAAAA 58.517 33.333 0.00 0.00 0.00 2.44
1898 4776 5.078411 TGTCAAAAGCTAAAACTGGCAAA 57.922 34.783 0.00 0.00 0.00 3.68
1899 4777 4.727507 TGTCAAAAGCTAAAACTGGCAA 57.272 36.364 0.00 0.00 0.00 4.52
1900 4778 4.727507 TTGTCAAAAGCTAAAACTGGCA 57.272 36.364 0.00 0.00 0.00 4.92
1901 4779 9.237846 GATATATTGTCAAAAGCTAAAACTGGC 57.762 33.333 0.00 0.00 0.00 4.85
1909 4787 9.787532 GCAAAAGTGATATATTGTCAAAAGCTA 57.212 29.630 0.00 0.00 0.00 3.32
1910 4788 7.761249 GGCAAAAGTGATATATTGTCAAAAGCT 59.239 33.333 0.00 0.00 0.00 3.74
1911 4789 7.545265 TGGCAAAAGTGATATATTGTCAAAAGC 59.455 33.333 0.00 0.00 34.74 3.51
1912 4790 8.984891 TGGCAAAAGTGATATATTGTCAAAAG 57.015 30.769 0.00 0.00 34.74 2.27
1913 4791 9.941325 AATGGCAAAAGTGATATATTGTCAAAA 57.059 25.926 0.00 0.00 40.35 2.44
1914 4792 9.585099 GAATGGCAAAAGTGATATATTGTCAAA 57.415 29.630 0.00 0.00 40.35 2.69
1915 4793 8.196771 GGAATGGCAAAAGTGATATATTGTCAA 58.803 33.333 0.00 0.00 40.35 3.18
1916 4794 7.468494 CGGAATGGCAAAAGTGATATATTGTCA 60.468 37.037 0.00 0.00 41.11 3.58
1917 4795 6.857964 CGGAATGGCAAAAGTGATATATTGTC 59.142 38.462 0.00 0.00 0.00 3.18
1918 4796 6.321181 ACGGAATGGCAAAAGTGATATATTGT 59.679 34.615 0.00 0.00 0.00 2.71
1919 4797 6.638063 CACGGAATGGCAAAAGTGATATATTG 59.362 38.462 9.20 0.00 0.00 1.90
1920 4798 6.239008 CCACGGAATGGCAAAAGTGATATATT 60.239 38.462 14.36 0.00 43.24 1.28
1921 4799 5.241506 CCACGGAATGGCAAAAGTGATATAT 59.758 40.000 14.36 0.00 43.24 0.86
1922 4800 4.578516 CCACGGAATGGCAAAAGTGATATA 59.421 41.667 14.36 0.00 43.24 0.86
1923 4801 3.381272 CCACGGAATGGCAAAAGTGATAT 59.619 43.478 14.36 0.00 43.24 1.63
1924 4802 2.752354 CCACGGAATGGCAAAAGTGATA 59.248 45.455 14.36 0.00 43.24 2.15
1925 4803 1.545582 CCACGGAATGGCAAAAGTGAT 59.454 47.619 14.36 0.00 43.24 3.06
1926 4804 0.958091 CCACGGAATGGCAAAAGTGA 59.042 50.000 14.36 0.00 43.24 3.41
1927 4805 3.495124 CCACGGAATGGCAAAAGTG 57.505 52.632 0.00 0.00 43.24 3.16
1936 4814 1.863267 TTTGCTTTTGCCACGGAATG 58.137 45.000 0.00 0.00 46.87 2.67
1937 4815 2.611225 TTTTGCTTTTGCCACGGAAT 57.389 40.000 0.00 0.00 46.87 3.01
1938 4816 2.611225 ATTTTGCTTTTGCCACGGAA 57.389 40.000 0.00 0.00 46.87 4.30
1939 4817 2.611225 AATTTTGCTTTTGCCACGGA 57.389 40.000 0.00 0.00 46.87 4.69
1940 4818 3.689309 AAAATTTTGCTTTTGCCACGG 57.311 38.095 1.75 0.00 46.87 4.94
1941 4819 6.042144 TCTAAAAATTTTGCTTTTGCCACG 57.958 33.333 3.73 0.00 46.87 4.94
1942 4820 6.906678 CACTCTAAAAATTTTGCTTTTGCCAC 59.093 34.615 3.73 0.00 46.87 5.01
1943 4821 6.038050 CCACTCTAAAAATTTTGCTTTTGCCA 59.962 34.615 3.73 0.00 46.87 4.92
1944 4822 6.429624 CCACTCTAAAAATTTTGCTTTTGCC 58.570 36.000 3.73 0.00 46.87 4.52
1946 4824 7.014092 TGCCACTCTAAAAATTTTGCTTTTG 57.986 32.000 3.73 0.27 0.00 2.44
1947 4825 7.622893 TTGCCACTCTAAAAATTTTGCTTTT 57.377 28.000 3.73 0.00 0.00 2.27
1948 4826 7.806409 ATTGCCACTCTAAAAATTTTGCTTT 57.194 28.000 3.73 0.00 0.00 3.51
1949 4827 7.806409 AATTGCCACTCTAAAAATTTTGCTT 57.194 28.000 3.73 0.00 0.00 3.91
1950 4828 7.806409 AAATTGCCACTCTAAAAATTTTGCT 57.194 28.000 3.73 0.00 28.61 3.91
1951 4829 8.272436 CAAAATTGCCACTCTAAAAATTTTGC 57.728 30.769 15.05 2.33 44.51 3.68
1955 4833 9.995003 TGTATCAAAATTGCCACTCTAAAAATT 57.005 25.926 0.00 0.00 0.00 1.82
1957 4835 9.995003 AATGTATCAAAATTGCCACTCTAAAAA 57.005 25.926 0.00 0.00 0.00 1.94
1958 4836 9.421806 CAATGTATCAAAATTGCCACTCTAAAA 57.578 29.630 0.00 0.00 0.00 1.52
1959 4837 8.584157 ACAATGTATCAAAATTGCCACTCTAAA 58.416 29.630 0.00 0.00 37.30 1.85
1960 4838 8.121305 ACAATGTATCAAAATTGCCACTCTAA 57.879 30.769 0.00 0.00 37.30 2.10
1961 4839 7.392953 TGACAATGTATCAAAATTGCCACTCTA 59.607 33.333 0.00 0.00 37.30 2.43
1962 4840 6.209192 TGACAATGTATCAAAATTGCCACTCT 59.791 34.615 0.00 0.00 37.30 3.24
1963 4841 6.389091 TGACAATGTATCAAAATTGCCACTC 58.611 36.000 0.00 0.00 37.30 3.51
1964 4842 6.343716 TGACAATGTATCAAAATTGCCACT 57.656 33.333 0.00 0.00 37.30 4.00
1965 4843 7.418840 TTTGACAATGTATCAAAATTGCCAC 57.581 32.000 0.00 0.00 41.82 5.01
1973 4851 9.066892 ACTCTTAGCTTTTGACAATGTATCAAA 57.933 29.630 0.00 0.00 42.78 2.69
1974 4852 8.506437 CACTCTTAGCTTTTGACAATGTATCAA 58.494 33.333 0.00 0.00 34.27 2.57
1975 4853 7.119699 CCACTCTTAGCTTTTGACAATGTATCA 59.880 37.037 0.00 0.00 0.00 2.15
1976 4854 7.467623 CCACTCTTAGCTTTTGACAATGTATC 58.532 38.462 0.00 0.00 0.00 2.24
1977 4855 6.127897 GCCACTCTTAGCTTTTGACAATGTAT 60.128 38.462 0.00 0.00 0.00 2.29
1978 4856 5.181245 GCCACTCTTAGCTTTTGACAATGTA 59.819 40.000 0.00 0.00 0.00 2.29
1979 4857 4.022849 GCCACTCTTAGCTTTTGACAATGT 60.023 41.667 0.00 0.00 0.00 2.71
1980 4858 4.022935 TGCCACTCTTAGCTTTTGACAATG 60.023 41.667 0.00 0.00 0.00 2.82
1981 4859 4.144297 TGCCACTCTTAGCTTTTGACAAT 58.856 39.130 0.00 0.00 0.00 2.71
1982 4860 3.550820 TGCCACTCTTAGCTTTTGACAA 58.449 40.909 0.00 0.00 0.00 3.18
1983 4861 3.207265 TGCCACTCTTAGCTTTTGACA 57.793 42.857 0.00 0.00 0.00 3.58
1984 4862 4.568152 TTTGCCACTCTTAGCTTTTGAC 57.432 40.909 0.00 0.00 0.00 3.18
1985 4863 5.590530 TTTTTGCCACTCTTAGCTTTTGA 57.409 34.783 0.00 0.00 0.00 2.69
1986 4864 7.945033 TTATTTTTGCCACTCTTAGCTTTTG 57.055 32.000 0.00 0.00 0.00 2.44
1987 4865 8.956533 TTTTATTTTTGCCACTCTTAGCTTTT 57.043 26.923 0.00 0.00 0.00 2.27
1988 4866 8.992073 CATTTTATTTTTGCCACTCTTAGCTTT 58.008 29.630 0.00 0.00 0.00 3.51
1989 4867 8.367156 TCATTTTATTTTTGCCACTCTTAGCTT 58.633 29.630 0.00 0.00 0.00 3.74
1990 4868 7.895759 TCATTTTATTTTTGCCACTCTTAGCT 58.104 30.769 0.00 0.00 0.00 3.32
1991 4869 8.532977 TTCATTTTATTTTTGCCACTCTTAGC 57.467 30.769 0.00 0.00 0.00 3.09
2016 4894 9.657419 CCATTCAGTAGCAAAAAGGATAAATTT 57.343 29.630 0.00 0.00 0.00 1.82
2017 4895 7.765819 GCCATTCAGTAGCAAAAAGGATAAATT 59.234 33.333 0.00 0.00 0.00 1.82
2018 4896 7.093377 TGCCATTCAGTAGCAAAAAGGATAAAT 60.093 33.333 0.00 0.00 32.56 1.40
2019 4897 6.210385 TGCCATTCAGTAGCAAAAAGGATAAA 59.790 34.615 0.00 0.00 32.56 1.40
2020 4898 5.714333 TGCCATTCAGTAGCAAAAAGGATAA 59.286 36.000 0.00 0.00 32.56 1.75
2021 4899 5.260424 TGCCATTCAGTAGCAAAAAGGATA 58.740 37.500 0.00 0.00 32.56 2.59
2022 4900 4.088634 TGCCATTCAGTAGCAAAAAGGAT 58.911 39.130 0.00 0.00 32.56 3.24
2023 4901 3.495331 TGCCATTCAGTAGCAAAAAGGA 58.505 40.909 0.00 0.00 32.56 3.36
2024 4902 3.940209 TGCCATTCAGTAGCAAAAAGG 57.060 42.857 0.00 0.00 32.56 3.11
2025 4903 5.697633 ACAAATGCCATTCAGTAGCAAAAAG 59.302 36.000 0.00 0.00 40.46 2.27
2026 4904 5.466058 CACAAATGCCATTCAGTAGCAAAAA 59.534 36.000 0.00 0.00 40.46 1.94
2027 4905 4.989797 CACAAATGCCATTCAGTAGCAAAA 59.010 37.500 0.00 0.00 40.46 2.44
2028 4906 4.280425 TCACAAATGCCATTCAGTAGCAAA 59.720 37.500 0.00 0.00 40.46 3.68
2029 4907 3.825585 TCACAAATGCCATTCAGTAGCAA 59.174 39.130 0.00 0.00 40.46 3.91
2030 4908 3.419943 TCACAAATGCCATTCAGTAGCA 58.580 40.909 0.00 0.00 41.50 3.49
2031 4909 4.142315 ACATCACAAATGCCATTCAGTAGC 60.142 41.667 0.00 0.00 0.00 3.58
2032 4910 5.571784 ACATCACAAATGCCATTCAGTAG 57.428 39.130 0.00 0.00 0.00 2.57
2033 4911 7.122501 ACAATACATCACAAATGCCATTCAGTA 59.877 33.333 0.00 0.00 0.00 2.74
2034 4912 6.071221 ACAATACATCACAAATGCCATTCAGT 60.071 34.615 0.00 0.00 0.00 3.41
2035 4913 6.334989 ACAATACATCACAAATGCCATTCAG 58.665 36.000 0.00 0.00 0.00 3.02
2036 4914 6.071503 TGACAATACATCACAAATGCCATTCA 60.072 34.615 0.00 0.00 0.00 2.57
2037 4915 6.331845 TGACAATACATCACAAATGCCATTC 58.668 36.000 0.00 0.00 0.00 2.67
2038 4916 6.283544 TGACAATACATCACAAATGCCATT 57.716 33.333 0.00 0.00 0.00 3.16
2039 4917 5.918426 TGACAATACATCACAAATGCCAT 57.082 34.783 0.00 0.00 0.00 4.40
2040 4918 5.718724 TTGACAATACATCACAAATGCCA 57.281 34.783 0.00 0.00 0.00 4.92
2041 4919 6.646240 AGTTTTGACAATACATCACAAATGCC 59.354 34.615 10.77 0.00 32.05 4.40
2042 4920 7.642071 AGTTTTGACAATACATCACAAATGC 57.358 32.000 10.77 0.00 32.05 3.56
2047 4925 9.337396 ACTCTTAAGTTTTGACAATACATCACA 57.663 29.630 10.77 0.00 28.74 3.58
2048 4926 9.599322 CACTCTTAAGTTTTGACAATACATCAC 57.401 33.333 10.77 0.00 31.71 3.06
2049 4927 8.783093 CCACTCTTAAGTTTTGACAATACATCA 58.217 33.333 10.77 0.00 31.71 3.07
2050 4928 8.784043 ACCACTCTTAAGTTTTGACAATACATC 58.216 33.333 10.77 0.00 31.71 3.06
2051 4929 8.691661 ACCACTCTTAAGTTTTGACAATACAT 57.308 30.769 10.77 2.26 31.71 2.29
2052 4930 9.048446 GTACCACTCTTAAGTTTTGACAATACA 57.952 33.333 10.77 0.00 31.71 2.29
2053 4931 9.048446 TGTACCACTCTTAAGTTTTGACAATAC 57.952 33.333 1.63 0.92 31.71 1.89
2054 4932 9.616156 TTGTACCACTCTTAAGTTTTGACAATA 57.384 29.630 1.63 0.00 31.71 1.90
2055 4933 8.514330 TTGTACCACTCTTAAGTTTTGACAAT 57.486 30.769 1.63 0.00 31.71 2.71
2056 4934 7.608761 ACTTGTACCACTCTTAAGTTTTGACAA 59.391 33.333 1.63 6.84 31.71 3.18
2057 4935 7.065324 CACTTGTACCACTCTTAAGTTTTGACA 59.935 37.037 1.63 0.00 31.71 3.58
2058 4936 7.279313 TCACTTGTACCACTCTTAAGTTTTGAC 59.721 37.037 1.63 0.00 31.71 3.18
2059 4937 7.332557 TCACTTGTACCACTCTTAAGTTTTGA 58.667 34.615 1.63 0.00 31.71 2.69
2060 4938 7.494625 TCTCACTTGTACCACTCTTAAGTTTTG 59.505 37.037 1.63 0.00 31.71 2.44
2061 4939 7.562135 TCTCACTTGTACCACTCTTAAGTTTT 58.438 34.615 1.63 0.00 31.71 2.43
2062 4940 7.120923 TCTCACTTGTACCACTCTTAAGTTT 57.879 36.000 1.63 0.00 31.71 2.66
2063 4941 6.726490 TCTCACTTGTACCACTCTTAAGTT 57.274 37.500 1.63 0.00 31.71 2.66
2064 4942 6.267928 ACATCTCACTTGTACCACTCTTAAGT 59.732 38.462 1.63 0.00 35.60 2.24
2065 4943 6.692486 ACATCTCACTTGTACCACTCTTAAG 58.308 40.000 0.00 0.00 0.00 1.85
2066 4944 6.665992 ACATCTCACTTGTACCACTCTTAA 57.334 37.500 0.00 0.00 0.00 1.85
2067 4945 6.665992 AACATCTCACTTGTACCACTCTTA 57.334 37.500 0.00 0.00 0.00 2.10
2068 4946 5.552870 AACATCTCACTTGTACCACTCTT 57.447 39.130 0.00 0.00 0.00 2.85
2069 4947 6.665992 TTAACATCTCACTTGTACCACTCT 57.334 37.500 0.00 0.00 0.00 3.24
2070 4948 7.907214 ATTTAACATCTCACTTGTACCACTC 57.093 36.000 0.00 0.00 0.00 3.51
2071 4949 8.157476 AGAATTTAACATCTCACTTGTACCACT 58.843 33.333 0.00 0.00 0.00 4.00
2072 4950 8.324163 AGAATTTAACATCTCACTTGTACCAC 57.676 34.615 0.00 0.00 0.00 4.16
2073 4951 9.653287 CTAGAATTTAACATCTCACTTGTACCA 57.347 33.333 0.00 0.00 0.00 3.25
2074 4952 9.871238 TCTAGAATTTAACATCTCACTTGTACC 57.129 33.333 0.00 0.00 0.00 3.34
2077 4955 9.429359 CACTCTAGAATTTAACATCTCACTTGT 57.571 33.333 0.00 0.00 0.00 3.16
2078 4956 9.645059 TCACTCTAGAATTTAACATCTCACTTG 57.355 33.333 0.00 0.00 0.00 3.16
2079 4957 9.646427 GTCACTCTAGAATTTAACATCTCACTT 57.354 33.333 0.00 0.00 0.00 3.16
2080 4958 8.807118 TGTCACTCTAGAATTTAACATCTCACT 58.193 33.333 0.00 0.00 0.00 3.41
2081 4959 8.988064 TGTCACTCTAGAATTTAACATCTCAC 57.012 34.615 0.00 0.00 0.00 3.51
2094 4972 9.162764 GCCAATTTTACTTATGTCACTCTAGAA 57.837 33.333 0.00 0.00 0.00 2.10
2095 4973 8.318412 TGCCAATTTTACTTATGTCACTCTAGA 58.682 33.333 0.00 0.00 0.00 2.43
2096 4974 8.492673 TGCCAATTTTACTTATGTCACTCTAG 57.507 34.615 0.00 0.00 0.00 2.43
2097 4975 8.856153 TTGCCAATTTTACTTATGTCACTCTA 57.144 30.769 0.00 0.00 0.00 2.43
2098 4976 7.759489 TTGCCAATTTTACTTATGTCACTCT 57.241 32.000 0.00 0.00 0.00 3.24
2099 4977 8.810652 TTTTGCCAATTTTACTTATGTCACTC 57.189 30.769 0.00 0.00 0.00 3.51
2100 4978 7.384932 GCTTTTGCCAATTTTACTTATGTCACT 59.615 33.333 0.00 0.00 40.15 3.41
2101 4979 7.509797 GCTTTTGCCAATTTTACTTATGTCAC 58.490 34.615 0.00 0.00 40.15 3.67
2102 4980 7.650834 GCTTTTGCCAATTTTACTTATGTCA 57.349 32.000 0.00 0.00 40.15 3.58
2120 4998 7.542130 ACTTTGTTTTTGTCACTCTAGCTTTTG 59.458 33.333 0.00 0.00 0.00 2.44
2121 4999 7.602753 ACTTTGTTTTTGTCACTCTAGCTTTT 58.397 30.769 0.00 0.00 0.00 2.27
2122 5000 7.158099 ACTTTGTTTTTGTCACTCTAGCTTT 57.842 32.000 0.00 0.00 0.00 3.51
2123 5001 6.759497 ACTTTGTTTTTGTCACTCTAGCTT 57.241 33.333 0.00 0.00 0.00 3.74
2124 5002 6.759497 AACTTTGTTTTTGTCACTCTAGCT 57.241 33.333 0.00 0.00 0.00 3.32
2125 5003 7.009265 GGAAAACTTTGTTTTTGTCACTCTAGC 59.991 37.037 9.36 0.00 0.00 3.42
2126 5004 8.244113 AGGAAAACTTTGTTTTTGTCACTCTAG 58.756 33.333 9.36 0.00 0.00 2.43
2127 5005 8.117813 AGGAAAACTTTGTTTTTGTCACTCTA 57.882 30.769 9.36 0.00 0.00 2.43
2128 5006 6.993079 AGGAAAACTTTGTTTTTGTCACTCT 58.007 32.000 9.36 0.00 0.00 3.24
2129 5007 7.652300 AAGGAAAACTTTGTTTTTGTCACTC 57.348 32.000 9.36 0.00 35.35 3.51
2158 5036 9.734984 AGGTATTGTTATACTAGCACAGTTTTT 57.265 29.630 0.00 0.00 38.80 1.94
2302 5180 4.847198 TGAAGAAGCAAGCTTGGATGATA 58.153 39.130 27.10 0.00 36.26 2.15
2356 5399 7.676572 GCATCAGGAAGGAAATAGACGTTTAAC 60.677 40.741 0.00 0.00 0.00 2.01
2424 5467 8.649973 AGAAGAAGACAAACTACAAGTTACAG 57.350 34.615 0.00 0.00 37.47 2.74
2428 5471 9.832445 TGATAAGAAGAAGACAAACTACAAGTT 57.168 29.630 0.00 0.00 40.80 2.66
2548 5592 2.953466 TTACCTGAAGAATCCGTCGG 57.047 50.000 4.39 4.39 0.00 4.79
2716 5760 3.256879 TGAGTTGACTCACTCACCTCATC 59.743 47.826 9.67 0.00 46.76 2.92
2825 5869 2.359602 GCAGGCAGCTTCAGCAGA 60.360 61.111 0.75 0.00 45.16 4.26
3000 6044 8.648097 CAAACTGCATATACCAGAATACGTATC 58.352 37.037 8.86 2.90 34.47 2.24
3039 6083 9.927668 ACATTTGCTTAACTTGTGCTTATTATT 57.072 25.926 0.00 0.00 0.00 1.40
3121 6165 0.253044 GGGCAGCCAGTGTATGAAGA 59.747 55.000 15.19 0.00 0.00 2.87
3170 6226 7.520451 AGGAGGTGGTTTAAAATGTTAAGTC 57.480 36.000 0.00 0.00 30.92 3.01
3238 6294 4.866508 TGGTGACCTTAGACTACAACTG 57.133 45.455 2.11 0.00 0.00 3.16
3311 6367 3.063045 GGGCGTTAGTATTTCCACTTTCG 59.937 47.826 0.00 0.00 0.00 3.46
3376 6432 3.704381 GTGCAAACACAAACGGACA 57.296 47.368 0.00 0.00 46.61 4.02
3477 6534 2.355363 CTCCGCGTGGTCAAACGA 60.355 61.111 16.01 0.00 46.49 3.85
3590 6650 2.760385 GTGGGAGAGGAGACGGGG 60.760 72.222 0.00 0.00 0.00 5.73
3669 6730 4.769488 AGAGAGAGTTGTCATCTGCTTACA 59.231 41.667 0.00 0.00 0.00 2.41
3688 6749 1.695242 TGGCAACTCGGGTAAAAGAGA 59.305 47.619 0.00 0.00 37.87 3.10
3689 6750 2.178912 TGGCAACTCGGGTAAAAGAG 57.821 50.000 0.00 0.00 40.16 2.85
3776 6842 4.022416 GGCATGGCAAAATACATATTCGGA 60.022 41.667 15.47 0.00 0.00 4.55
3909 6983 2.028839 TGCCAGATGCCATTTTTGACAG 60.029 45.455 0.00 0.00 40.16 3.51
3980 7055 3.988976 ACTACAGTTGCCATGTCTGAT 57.011 42.857 10.04 1.04 33.93 2.90
4014 7089 3.498777 TCCATGTTCGTTTAATCGCAACA 59.501 39.130 17.83 17.83 36.35 3.33
4015 7090 4.073169 TCCATGTTCGTTTAATCGCAAC 57.927 40.909 0.96 7.42 0.00 4.17
4020 7095 6.020971 ACCCTTTTCCATGTTCGTTTAATC 57.979 37.500 0.00 0.00 0.00 1.75
4021 7096 5.047590 GGACCCTTTTCCATGTTCGTTTAAT 60.048 40.000 0.00 0.00 35.49 1.40
4111 7187 1.035932 AGTAGATAGCGCCCACACGT 61.036 55.000 2.29 0.00 34.88 4.49
4122 7198 2.259618 ACGTGTGCGCAAAGTAGATAG 58.740 47.619 14.00 0.00 42.83 2.08
4129 7205 2.173382 GCCTACGTGTGCGCAAAG 59.827 61.111 14.00 9.30 42.83 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.