Multiple sequence alignment - TraesCS3D01G210000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G210000 chr3D 100.000 9057 0 0 1 9057 277549531 277540475 0.000000e+00 16726
1 TraesCS3D01G210000 chr3D 90.299 134 5 1 6133 6266 277543267 277543142 1.560000e-37 169
2 TraesCS3D01G210000 chr3D 90.299 134 5 1 6265 6390 277543399 277543266 1.560000e-37 169
3 TraesCS3D01G210000 chr3A 94.924 5516 197 40 773 6266 361985049 361990503 0.000000e+00 8558
4 TraesCS3D01G210000 chr3A 95.054 2851 67 16 6265 9057 361990376 361993210 0.000000e+00 4416
5 TraesCS3D01G210000 chr3B 96.594 1791 43 10 3438 5226 372834154 372835928 0.000000e+00 2953
6 TraesCS3D01G210000 chr3B 94.084 1944 46 28 7143 9057 372838604 372840507 0.000000e+00 2889
7 TraesCS3D01G210000 chr3B 93.352 1790 62 13 924 2689 372832402 372834158 0.000000e+00 2593
8 TraesCS3D01G210000 chr3B 94.562 993 26 7 5211 6200 372836072 372837039 0.000000e+00 1509
9 TraesCS3D01G210000 chr3B 95.438 833 15 4 6334 7145 372837613 372838443 0.000000e+00 1306
10 TraesCS3D01G210000 chr3B 96.250 80 1 1 6265 6342 372836972 372837051 7.380000e-26 130
11 TraesCS3D01G210000 chr3B 98.246 57 1 0 6210 6266 372837613 372837669 5.790000e-17 100
12 TraesCS3D01G210000 chr7A 76.367 622 112 20 1 596 734934879 734935491 1.480000e-77 302
13 TraesCS3D01G210000 chr2A 80.702 285 48 4 2419 2696 205213198 205213482 1.980000e-51 215
14 TraesCS3D01G210000 chr2B 80.282 284 50 3 2419 2696 247929660 247929943 9.210000e-50 209


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G210000 chr3D 277540475 277549531 9056 True 16726 16726 100.000000 1 9057 1 chr3D.!!$R1 9056
1 TraesCS3D01G210000 chr3A 361985049 361993210 8161 False 6487 8558 94.989000 773 9057 2 chr3A.!!$F1 8284
2 TraesCS3D01G210000 chr3B 372832402 372840507 8105 False 1640 2953 95.503714 924 9057 7 chr3B.!!$F1 8133
3 TraesCS3D01G210000 chr7A 734934879 734935491 612 False 302 302 76.367000 1 596 1 chr7A.!!$F1 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
763 767 0.033920 AGTGATGCAGCTGTCAACGA 59.966 50.000 16.64 1.95 0.00 3.85 F
816 820 0.037232 GGACAGAAGGACGAACTGGG 60.037 60.000 0.00 0.00 36.17 4.45 F
2749 2785 0.038166 CACATTACCAGGTGGCAGGT 59.962 55.000 0.76 2.25 41.89 4.00 F
3221 3275 0.033894 GAGACCGGAGAGGAGGAAGT 60.034 60.000 9.46 0.00 45.00 3.01 F
3423 3477 0.176680 CCTGCTCTGACTATGGCGTT 59.823 55.000 0.00 0.00 0.00 4.84 F
4052 4106 2.426738 CTGTTTTGTGGGTTCTCAAGCA 59.573 45.455 0.00 0.00 0.00 3.91 F
5338 5559 0.890683 CACATGGCTCCTTTTCACCC 59.109 55.000 0.00 0.00 0.00 4.61 F
6204 6428 1.128507 GACAGTGTGTGTGTGTGTGTG 59.871 52.381 0.00 0.00 40.56 3.82 F
6311 7107 0.181114 TCATCTGGCCAGCACATACC 59.819 55.000 28.91 0.00 0.00 2.73 F
6315 7111 0.394762 CTGGCCAGCACATACCACAT 60.395 55.000 22.33 0.00 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2753 2789 0.033228 GTCCCTGCTCTGATGGATCG 59.967 60.000 0.00 0.00 0.00 3.69 R
2803 2839 1.276421 CTCCTCCACATCTTTGACGGT 59.724 52.381 0.00 0.00 0.00 4.83 R
3660 3714 3.675698 GTCTCTAGAACCAGAAAACAGCG 59.324 47.826 0.00 0.00 0.00 5.18 R
5015 5077 1.597854 CCGGCTGCTCTTGTGAACA 60.598 57.895 0.00 0.00 0.00 3.18 R
5338 5559 5.882557 ACATGGCCATTTCAGTTAGTCTAAG 59.117 40.000 17.92 0.80 0.00 2.18 R
5842 6063 2.160417 CGATGCCCTTCACTCTGAAAAC 59.840 50.000 0.00 0.00 35.73 2.43 R
6294 7082 0.107017 GTGGTATGTGCTGGCCAGAT 60.107 55.000 37.21 22.59 0.00 2.90 R
7698 8688 0.950836 TCCAAGTTGTTGCACATCCG 59.049 50.000 1.45 0.00 31.64 4.18 R
7836 8826 1.153549 CCGGCTCAGCTAGTTCCAC 60.154 63.158 0.00 0.00 0.00 4.02 R
8307 9306 1.736586 CCGCGCCAATAGTCTCTCT 59.263 57.895 0.00 0.00 0.00 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.672030 CAGCCGATGACCTGCAACA 60.672 57.895 0.00 0.00 0.00 3.33
24 26 3.027170 GATGACCTGCAACACCGCG 62.027 63.158 0.00 0.00 33.35 6.46
27 29 4.308458 ACCTGCAACACCGCGCTA 62.308 61.111 5.56 0.00 33.35 4.26
70 72 2.029073 CGCTGGAGTCGGTGTTGT 59.971 61.111 0.00 0.00 0.00 3.32
75 77 1.887198 CTGGAGTCGGTGTTGTAGAGT 59.113 52.381 0.00 0.00 0.00 3.24
78 80 0.039437 AGTCGGTGTTGTAGAGTGCG 60.039 55.000 0.00 0.00 0.00 5.34
79 81 1.372499 TCGGTGTTGTAGAGTGCGC 60.372 57.895 0.00 0.00 0.00 6.09
85 87 1.667830 TTGTAGAGTGCGCCAGTGC 60.668 57.895 4.18 0.00 0.00 4.40
97 99 3.720193 CAGTGCAGTCGCTGGTGC 61.720 66.667 8.57 0.95 44.80 5.01
144 148 3.363875 CGCTCTAGTGCAACGTCG 58.636 61.111 16.44 0.00 45.86 5.12
148 152 1.400629 GCTCTAGTGCAACGTCGTACA 60.401 52.381 11.82 0.00 45.86 2.90
149 153 2.731341 GCTCTAGTGCAACGTCGTACAT 60.731 50.000 11.82 0.00 45.86 2.29
152 156 0.039798 AGTGCAACGTCGTACATCGT 60.040 50.000 0.00 6.52 45.86 3.73
153 157 0.361184 GTGCAACGTCGTACATCGTC 59.639 55.000 11.63 3.21 39.39 4.20
164 168 0.963856 TACATCGTCGTGGGAGTGCT 60.964 55.000 0.00 0.00 0.00 4.40
165 169 1.517257 CATCGTCGTGGGAGTGCTC 60.517 63.158 0.00 0.00 0.00 4.26
167 171 4.778415 CGTCGTGGGAGTGCTCGG 62.778 72.222 0.00 0.00 0.00 4.63
173 177 3.050275 GGGAGTGCTCGGTGTTGC 61.050 66.667 0.00 0.00 0.00 4.17
174 178 3.414700 GGAGTGCTCGGTGTTGCG 61.415 66.667 0.00 0.00 0.00 4.85
197 201 3.041940 CGTCGCGCCTGAGGTTTT 61.042 61.111 0.00 0.00 0.00 2.43
213 217 2.679199 TTTTTGTTTTTCCGCGGCC 58.321 47.368 23.51 5.94 0.00 6.13
225 229 4.752879 GCGGCCGAGCAGTAACCA 62.753 66.667 33.48 0.00 37.05 3.67
226 230 2.186903 CGGCCGAGCAGTAACCAT 59.813 61.111 24.07 0.00 0.00 3.55
227 231 2.173669 CGGCCGAGCAGTAACCATG 61.174 63.158 24.07 0.00 0.00 3.66
228 232 1.078426 GGCCGAGCAGTAACCATGT 60.078 57.895 0.00 0.00 0.00 3.21
229 233 1.090052 GGCCGAGCAGTAACCATGTC 61.090 60.000 0.00 0.00 0.00 3.06
230 234 1.421410 GCCGAGCAGTAACCATGTCG 61.421 60.000 0.00 0.00 0.00 4.35
231 235 0.172578 CCGAGCAGTAACCATGTCGA 59.827 55.000 0.22 0.00 0.00 4.20
232 236 1.403647 CCGAGCAGTAACCATGTCGAA 60.404 52.381 0.00 0.00 0.00 3.71
233 237 1.920574 CGAGCAGTAACCATGTCGAAG 59.079 52.381 0.00 0.00 0.00 3.79
234 238 2.415491 CGAGCAGTAACCATGTCGAAGA 60.415 50.000 0.00 0.00 0.00 2.87
235 239 3.735208 CGAGCAGTAACCATGTCGAAGAT 60.735 47.826 0.00 0.00 40.67 2.40
236 240 3.786635 AGCAGTAACCATGTCGAAGATC 58.213 45.455 0.00 0.00 40.67 2.75
237 241 3.449018 AGCAGTAACCATGTCGAAGATCT 59.551 43.478 0.00 0.00 40.67 2.75
238 242 3.799420 GCAGTAACCATGTCGAAGATCTC 59.201 47.826 0.00 0.00 40.67 2.75
263 267 4.360964 GCCGGTGCTGCAATGCAA 62.361 61.111 9.92 0.00 45.12 4.08
264 268 2.126228 CCGGTGCTGCAATGCAAG 60.126 61.111 9.92 4.86 45.12 4.01
265 269 2.646719 CGGTGCTGCAATGCAAGT 59.353 55.556 9.92 0.00 45.12 3.16
266 270 1.585267 CCGGTGCTGCAATGCAAGTA 61.585 55.000 9.92 0.27 45.12 2.24
267 271 0.452987 CGGTGCTGCAATGCAAGTAT 59.547 50.000 9.92 0.00 45.12 2.12
268 272 1.796253 CGGTGCTGCAATGCAAGTATG 60.796 52.381 9.92 0.00 45.12 2.39
287 291 2.646121 CAACCCTTGCTCCTGGAAC 58.354 57.895 0.00 0.00 0.00 3.62
288 292 0.111253 CAACCCTTGCTCCTGGAACT 59.889 55.000 0.00 0.00 0.00 3.01
289 293 1.351017 CAACCCTTGCTCCTGGAACTA 59.649 52.381 0.00 0.00 0.00 2.24
290 294 0.984995 ACCCTTGCTCCTGGAACTAC 59.015 55.000 0.00 0.00 0.00 2.73
291 295 0.984230 CCCTTGCTCCTGGAACTACA 59.016 55.000 0.00 0.00 0.00 2.74
292 296 1.339151 CCCTTGCTCCTGGAACTACAC 60.339 57.143 0.00 0.00 0.00 2.90
293 297 1.673033 CCTTGCTCCTGGAACTACACG 60.673 57.143 0.00 0.00 0.00 4.49
294 298 1.272490 CTTGCTCCTGGAACTACACGA 59.728 52.381 0.00 0.00 0.00 4.35
295 299 1.557099 TGCTCCTGGAACTACACGAT 58.443 50.000 0.00 0.00 0.00 3.73
296 300 1.476891 TGCTCCTGGAACTACACGATC 59.523 52.381 0.00 0.00 0.00 3.69
297 301 1.751924 GCTCCTGGAACTACACGATCT 59.248 52.381 0.00 0.00 0.00 2.75
298 302 2.223618 GCTCCTGGAACTACACGATCTC 60.224 54.545 0.00 0.00 0.00 2.75
299 303 3.283751 CTCCTGGAACTACACGATCTCT 58.716 50.000 0.00 0.00 0.00 3.10
300 304 3.280295 TCCTGGAACTACACGATCTCTC 58.720 50.000 0.00 0.00 0.00 3.20
301 305 2.359531 CCTGGAACTACACGATCTCTCC 59.640 54.545 0.00 0.00 0.00 3.71
302 306 2.014857 TGGAACTACACGATCTCTCCG 58.985 52.381 0.00 0.00 0.00 4.63
303 307 2.015587 GGAACTACACGATCTCTCCGT 58.984 52.381 0.00 0.00 41.36 4.69
304 308 2.031930 GGAACTACACGATCTCTCCGTC 59.968 54.545 0.00 0.00 38.29 4.79
305 309 2.695127 ACTACACGATCTCTCCGTCT 57.305 50.000 0.00 0.00 38.29 4.18
306 310 2.281517 ACTACACGATCTCTCCGTCTG 58.718 52.381 0.00 0.00 38.29 3.51
307 311 1.003331 CTACACGATCTCTCCGTCTGC 60.003 57.143 0.00 0.00 38.29 4.26
308 312 0.678366 ACACGATCTCTCCGTCTGCT 60.678 55.000 0.00 0.00 38.29 4.24
309 313 0.248417 CACGATCTCTCCGTCTGCTG 60.248 60.000 0.00 0.00 38.29 4.41
310 314 1.299014 CGATCTCTCCGTCTGCTGC 60.299 63.158 0.00 0.00 0.00 5.25
311 315 1.812525 GATCTCTCCGTCTGCTGCA 59.187 57.895 0.88 0.88 0.00 4.41
312 316 0.174389 GATCTCTCCGTCTGCTGCAA 59.826 55.000 3.02 0.00 0.00 4.08
313 317 0.108424 ATCTCTCCGTCTGCTGCAAC 60.108 55.000 3.02 4.46 0.00 4.17
314 318 1.739562 CTCTCCGTCTGCTGCAACC 60.740 63.158 3.02 0.00 0.00 3.77
315 319 2.031012 CTCCGTCTGCTGCAACCA 59.969 61.111 3.02 0.00 0.00 3.67
316 320 2.280797 TCCGTCTGCTGCAACCAC 60.281 61.111 3.02 0.00 0.00 4.16
317 321 3.716006 CCGTCTGCTGCAACCACG 61.716 66.667 17.01 17.01 0.00 4.94
318 322 2.661537 CGTCTGCTGCAACCACGA 60.662 61.111 18.42 3.86 32.08 4.35
319 323 2.243957 CGTCTGCTGCAACCACGAA 61.244 57.895 18.42 0.00 32.08 3.85
320 324 1.568612 CGTCTGCTGCAACCACGAAT 61.569 55.000 18.42 0.00 32.08 3.34
321 325 0.166814 GTCTGCTGCAACCACGAATC 59.833 55.000 3.02 0.00 0.00 2.52
322 326 0.250252 TCTGCTGCAACCACGAATCA 60.250 50.000 3.02 0.00 0.00 2.57
323 327 0.806868 CTGCTGCAACCACGAATCAT 59.193 50.000 3.02 0.00 0.00 2.45
324 328 0.522626 TGCTGCAACCACGAATCATG 59.477 50.000 0.00 0.00 0.00 3.07
325 329 0.523072 GCTGCAACCACGAATCATGT 59.477 50.000 0.00 0.00 0.00 3.21
326 330 1.466360 GCTGCAACCACGAATCATGTC 60.466 52.381 0.00 0.00 0.00 3.06
327 331 0.795698 TGCAACCACGAATCATGTCG 59.204 50.000 4.33 4.33 46.54 4.35
328 332 0.096976 GCAACCACGAATCATGTCGG 59.903 55.000 10.11 0.41 45.40 4.79
329 333 0.096976 CAACCACGAATCATGTCGGC 59.903 55.000 10.11 0.00 45.40 5.54
330 334 1.358725 AACCACGAATCATGTCGGCG 61.359 55.000 0.00 0.00 45.40 6.46
331 335 2.525248 CCACGAATCATGTCGGCGG 61.525 63.158 7.21 6.41 45.40 6.13
332 336 2.890474 ACGAATCATGTCGGCGGC 60.890 61.111 3.62 3.62 45.40 6.53
333 337 3.988385 CGAATCATGTCGGCGGCG 61.988 66.667 27.15 27.15 37.37 6.46
334 338 3.640000 GAATCATGTCGGCGGCGG 61.640 66.667 31.73 15.35 0.00 6.13
345 349 4.241999 GCGGCGGCTACTGCAATG 62.242 66.667 9.78 0.00 41.79 2.82
346 350 4.241999 CGGCGGCTACTGCAATGC 62.242 66.667 7.61 0.00 41.91 3.56
347 351 3.133464 GGCGGCTACTGCAATGCA 61.133 61.111 7.99 7.99 41.91 3.96
363 367 2.967397 CAGCACTTGCCCATGGTG 59.033 61.111 11.73 2.67 43.38 4.17
366 370 2.967397 CACTTGCCCATGGTGCTG 59.033 61.111 21.23 16.72 0.00 4.41
367 371 2.993264 ACTTGCCCATGGTGCTGC 60.993 61.111 21.23 13.70 0.00 5.25
368 372 3.766691 CTTGCCCATGGTGCTGCC 61.767 66.667 21.23 1.07 37.90 4.85
376 380 3.635191 TGGTGCTGCCATCGTGGA 61.635 61.111 8.04 0.00 43.61 4.02
377 381 3.127533 GGTGCTGCCATCGTGGAC 61.128 66.667 8.04 1.29 40.96 4.02
378 382 3.127533 GTGCTGCCATCGTGGACC 61.128 66.667 8.04 0.00 40.96 4.46
379 383 4.408821 TGCTGCCATCGTGGACCC 62.409 66.667 8.04 0.00 40.96 4.46
380 384 4.101448 GCTGCCATCGTGGACCCT 62.101 66.667 8.04 0.00 40.96 4.34
381 385 2.187946 CTGCCATCGTGGACCCTC 59.812 66.667 8.04 0.00 40.96 4.30
382 386 3.723235 CTGCCATCGTGGACCCTCG 62.723 68.421 8.04 4.31 40.96 4.63
384 388 4.530857 CCATCGTGGACCCTCGCC 62.531 72.222 5.71 0.00 40.96 5.54
385 389 3.461773 CATCGTGGACCCTCGCCT 61.462 66.667 5.71 0.00 33.63 5.52
386 390 3.461773 ATCGTGGACCCTCGCCTG 61.462 66.667 5.71 0.00 33.63 4.85
395 399 4.598894 CCTCGCCTGCGGAGGATG 62.599 72.222 29.09 18.01 42.93 3.51
400 404 4.100084 CCTGCGGAGGATGCCACA 62.100 66.667 19.84 0.00 42.93 4.17
401 405 2.046023 CTGCGGAGGATGCCACAA 60.046 61.111 0.00 0.00 0.00 3.33
402 406 1.452651 CTGCGGAGGATGCCACAAT 60.453 57.895 0.00 0.00 0.00 2.71
403 407 1.721664 CTGCGGAGGATGCCACAATG 61.722 60.000 0.00 0.00 0.00 2.82
404 408 3.113745 CGGAGGATGCCACAATGC 58.886 61.111 0.00 0.00 0.00 3.56
405 409 1.750018 CGGAGGATGCCACAATGCA 60.750 57.895 0.00 0.00 46.94 3.96
413 417 2.442212 TGCCACAATGCATCACTTTG 57.558 45.000 0.00 0.00 38.91 2.77
414 418 1.687660 TGCCACAATGCATCACTTTGT 59.312 42.857 0.00 0.00 44.92 2.83
415 419 2.288334 TGCCACAATGCATCACTTTGTC 60.288 45.455 0.00 0.00 42.88 3.18
416 420 2.029649 GCCACAATGCATCACTTTGTCT 60.030 45.455 0.00 0.00 42.88 3.41
417 421 3.191162 GCCACAATGCATCACTTTGTCTA 59.809 43.478 0.00 0.00 42.88 2.59
418 422 4.142315 GCCACAATGCATCACTTTGTCTAT 60.142 41.667 0.00 0.00 42.88 1.98
419 423 5.337554 CCACAATGCATCACTTTGTCTATG 58.662 41.667 0.00 0.00 42.88 2.23
420 424 5.337554 CACAATGCATCACTTTGTCTATGG 58.662 41.667 0.00 0.00 42.88 2.74
421 425 5.012239 ACAATGCATCACTTTGTCTATGGT 58.988 37.500 0.00 0.00 41.44 3.55
422 426 5.106038 ACAATGCATCACTTTGTCTATGGTG 60.106 40.000 0.00 0.00 41.44 4.17
423 427 4.019792 TGCATCACTTTGTCTATGGTGT 57.980 40.909 0.00 0.00 0.00 4.16
424 428 4.397420 TGCATCACTTTGTCTATGGTGTT 58.603 39.130 0.00 0.00 0.00 3.32
425 429 4.216042 TGCATCACTTTGTCTATGGTGTTG 59.784 41.667 0.00 0.00 34.48 3.33
426 430 4.726416 CATCACTTTGTCTATGGTGTTGC 58.274 43.478 0.00 0.00 0.00 4.17
427 431 3.146066 TCACTTTGTCTATGGTGTTGCC 58.854 45.455 0.00 0.00 37.90 4.52
438 442 3.271250 GTGTTGCCACCATGGATCT 57.729 52.632 21.47 0.00 40.96 2.75
439 443 1.549203 GTGTTGCCACCATGGATCTT 58.451 50.000 21.47 0.00 40.96 2.40
440 444 1.474077 GTGTTGCCACCATGGATCTTC 59.526 52.381 21.47 4.78 40.96 2.87
441 445 0.734889 GTTGCCACCATGGATCTTCG 59.265 55.000 21.47 0.00 40.96 3.79
442 446 1.031571 TTGCCACCATGGATCTTCGC 61.032 55.000 21.47 10.28 40.96 4.70
443 447 2.189499 GCCACCATGGATCTTCGCC 61.189 63.158 21.47 0.00 40.96 5.54
444 448 1.889105 CCACCATGGATCTTCGCCG 60.889 63.158 21.47 0.00 40.96 6.46
445 449 2.203070 ACCATGGATCTTCGCCGC 60.203 61.111 21.47 0.00 0.00 6.53
446 450 3.341043 CCATGGATCTTCGCCGCG 61.341 66.667 5.56 6.39 0.00 6.46
447 451 2.279451 CATGGATCTTCGCCGCGA 60.279 61.111 12.39 12.39 0.00 5.87
448 452 2.279517 ATGGATCTTCGCCGCGAC 60.280 61.111 16.57 3.54 34.89 5.19
449 453 4.847516 TGGATCTTCGCCGCGACG 62.848 66.667 16.57 14.46 34.89 5.12
460 464 4.505217 CGCGACGGATGCTGCAAC 62.505 66.667 6.36 3.28 0.00 4.17
461 465 4.505217 GCGACGGATGCTGCAACG 62.505 66.667 22.64 22.64 0.00 4.10
462 466 3.112075 CGACGGATGCTGCAACGT 61.112 61.111 27.58 27.58 42.88 3.99
463 467 1.803922 CGACGGATGCTGCAACGTA 60.804 57.895 27.39 0.00 39.95 3.57
464 468 1.742900 CGACGGATGCTGCAACGTAG 61.743 60.000 27.39 24.16 39.95 3.51
465 469 0.457853 GACGGATGCTGCAACGTAGA 60.458 55.000 27.39 0.00 39.95 2.59
466 470 0.175760 ACGGATGCTGCAACGTAGAT 59.824 50.000 26.60 8.89 37.85 1.98
467 471 1.290203 CGGATGCTGCAACGTAGATT 58.710 50.000 18.09 0.00 0.00 2.40
468 472 1.665679 CGGATGCTGCAACGTAGATTT 59.334 47.619 18.09 0.00 0.00 2.17
469 473 2.095853 CGGATGCTGCAACGTAGATTTT 59.904 45.455 18.09 0.00 0.00 1.82
470 474 3.429085 GGATGCTGCAACGTAGATTTTG 58.571 45.455 6.36 0.00 0.00 2.44
471 475 2.330231 TGCTGCAACGTAGATTTTGC 57.670 45.000 0.00 0.71 46.88 3.68
472 476 1.879380 TGCTGCAACGTAGATTTTGCT 59.121 42.857 0.00 0.00 46.83 3.91
473 477 2.095768 TGCTGCAACGTAGATTTTGCTC 60.096 45.455 0.00 2.40 46.83 4.26
474 478 2.762472 CTGCAACGTAGATTTTGCTCG 58.238 47.619 8.91 0.00 46.83 5.03
475 479 2.139917 TGCAACGTAGATTTTGCTCGT 58.860 42.857 8.91 0.00 46.83 4.18
476 480 2.096466 TGCAACGTAGATTTTGCTCGTG 60.096 45.455 8.91 0.00 46.83 4.35
477 481 2.724839 GCAACGTAGATTTTGCTCGTGG 60.725 50.000 0.48 0.00 43.96 4.94
478 482 2.450609 ACGTAGATTTTGCTCGTGGT 57.549 45.000 0.00 0.00 33.55 4.16
479 483 2.066262 ACGTAGATTTTGCTCGTGGTG 58.934 47.619 0.00 0.00 33.55 4.17
480 484 1.201921 CGTAGATTTTGCTCGTGGTGC 60.202 52.381 0.00 0.00 0.00 5.01
481 485 2.076863 GTAGATTTTGCTCGTGGTGCT 58.923 47.619 0.00 0.00 0.00 4.40
482 486 0.877071 AGATTTTGCTCGTGGTGCTG 59.123 50.000 0.00 0.00 0.00 4.41
483 487 0.730494 GATTTTGCTCGTGGTGCTGC 60.730 55.000 0.00 0.00 0.00 5.25
484 488 1.454572 ATTTTGCTCGTGGTGCTGCA 61.455 50.000 0.00 0.00 0.00 4.41
485 489 1.661498 TTTTGCTCGTGGTGCTGCAA 61.661 50.000 2.77 0.00 42.60 4.08
486 490 2.335052 TTTGCTCGTGGTGCTGCAAC 62.335 55.000 11.52 11.52 43.74 4.17
487 491 4.374702 GCTCGTGGTGCTGCAACG 62.375 66.667 18.05 18.05 45.52 4.10
488 492 4.374702 CTCGTGGTGCTGCAACGC 62.375 66.667 20.71 20.71 43.90 4.84
514 518 1.650912 CAGGATGCTACAATGCGGC 59.349 57.895 0.00 0.00 35.36 6.53
515 519 1.889105 AGGATGCTACAATGCGGCG 60.889 57.895 0.51 0.51 35.36 6.46
516 520 2.051882 GATGCTACAATGCGGCGC 60.052 61.111 27.44 27.44 35.36 6.53
517 521 2.514592 ATGCTACAATGCGGCGCT 60.515 55.556 33.26 15.39 35.36 5.92
518 522 2.435610 GATGCTACAATGCGGCGCTC 62.436 60.000 33.26 14.74 35.36 5.03
519 523 4.285149 GCTACAATGCGGCGCTCG 62.285 66.667 33.26 22.05 42.76 5.03
520 524 2.885644 CTACAATGCGGCGCTCGT 60.886 61.111 33.26 26.20 41.72 4.18
521 525 2.433491 TACAATGCGGCGCTCGTT 60.433 55.556 33.26 20.91 41.72 3.85
522 526 2.348140 CTACAATGCGGCGCTCGTTC 62.348 60.000 33.26 2.78 41.72 3.95
523 527 3.787676 CAATGCGGCGCTCGTTCA 61.788 61.111 33.26 12.12 41.72 3.18
524 528 2.819595 AATGCGGCGCTCGTTCAT 60.820 55.556 33.26 14.13 41.72 2.57
525 529 1.520564 AATGCGGCGCTCGTTCATA 60.521 52.632 33.26 10.41 41.72 2.15
526 530 1.087202 AATGCGGCGCTCGTTCATAA 61.087 50.000 33.26 9.57 41.72 1.90
527 531 1.762222 ATGCGGCGCTCGTTCATAAC 61.762 55.000 33.26 0.00 41.72 1.89
528 532 3.003478 CGGCGCTCGTTCATAACC 58.997 61.111 7.64 0.00 0.00 2.85
529 533 1.807981 CGGCGCTCGTTCATAACCA 60.808 57.895 7.64 0.00 0.00 3.67
530 534 1.713830 GGCGCTCGTTCATAACCAC 59.286 57.895 7.64 0.00 0.00 4.16
531 535 1.343821 GCGCTCGTTCATAACCACG 59.656 57.895 0.00 0.00 37.77 4.94
532 536 1.074319 GCGCTCGTTCATAACCACGA 61.074 55.000 0.00 0.00 43.00 4.35
538 542 4.288670 TCGTTCATAACCACGAGATCTC 57.711 45.455 13.05 13.05 40.43 2.75
547 551 3.893763 CGAGATCTCGCCGGCACT 61.894 66.667 30.41 16.33 46.50 4.40
548 552 2.279120 GAGATCTCGCCGGCACTG 60.279 66.667 28.98 15.55 0.00 3.66
549 553 4.521062 AGATCTCGCCGGCACTGC 62.521 66.667 28.98 11.26 34.43 4.40
550 554 4.819761 GATCTCGCCGGCACTGCA 62.820 66.667 28.98 4.99 38.93 4.41
551 555 4.393155 ATCTCGCCGGCACTGCAA 62.393 61.111 28.98 5.24 38.93 4.08
563 567 2.756400 CTGCAAGTAGGGGGCACA 59.244 61.111 0.00 0.00 33.34 4.57
564 568 1.074775 CTGCAAGTAGGGGGCACAA 59.925 57.895 0.00 0.00 33.34 3.33
565 569 1.228429 TGCAAGTAGGGGGCACAAC 60.228 57.895 0.00 0.00 31.58 3.32
566 570 1.074951 GCAAGTAGGGGGCACAACT 59.925 57.895 0.00 0.00 0.00 3.16
567 571 1.244019 GCAAGTAGGGGGCACAACTG 61.244 60.000 0.00 0.00 0.00 3.16
568 572 0.609131 CAAGTAGGGGGCACAACTGG 60.609 60.000 0.00 0.00 0.00 4.00
569 573 2.361230 GTAGGGGGCACAACTGGC 60.361 66.667 0.00 0.00 42.39 4.85
570 574 2.856494 TAGGGGGCACAACTGGCA 60.856 61.111 0.00 0.00 44.99 4.92
571 575 3.204467 TAGGGGGCACAACTGGCAC 62.204 63.158 0.00 0.00 45.92 5.01
573 577 4.947147 GGGGCACAACTGGCACGA 62.947 66.667 0.00 0.00 44.99 4.35
574 578 3.357079 GGGCACAACTGGCACGAG 61.357 66.667 0.00 0.00 44.99 4.18
575 579 4.030452 GGCACAACTGGCACGAGC 62.030 66.667 0.00 0.00 42.66 5.03
576 580 4.374702 GCACAACTGGCACGAGCG 62.375 66.667 0.00 0.00 43.41 5.03
577 581 2.967076 CACAACTGGCACGAGCGT 60.967 61.111 0.00 0.00 43.41 5.07
578 582 2.203015 ACAACTGGCACGAGCGTT 60.203 55.556 0.00 0.00 43.41 4.84
579 583 2.249309 CAACTGGCACGAGCGTTG 59.751 61.111 10.14 10.14 43.41 4.10
580 584 3.649986 AACTGGCACGAGCGTTGC 61.650 61.111 0.00 1.05 43.41 4.17
581 585 4.908687 ACTGGCACGAGCGTTGCA 62.909 61.111 15.35 0.00 43.41 4.08
582 586 3.648982 CTGGCACGAGCGTTGCAA 61.649 61.111 15.35 0.00 43.41 4.08
583 587 3.584250 CTGGCACGAGCGTTGCAAG 62.584 63.158 0.00 11.39 43.41 4.01
584 588 4.389576 GGCACGAGCGTTGCAAGG 62.390 66.667 14.70 14.70 43.41 3.61
585 589 3.649986 GCACGAGCGTTGCAAGGT 61.650 61.111 19.45 10.18 0.00 3.50
586 590 2.551270 CACGAGCGTTGCAAGGTC 59.449 61.111 19.45 16.52 0.00 3.85
589 593 2.665185 GAGCGTTGCAAGGTCGGT 60.665 61.111 19.45 15.60 37.98 4.69
590 594 2.665185 AGCGTTGCAAGGTCGGTC 60.665 61.111 19.45 3.59 0.00 4.79
591 595 2.970324 GCGTTGCAAGGTCGGTCA 60.970 61.111 19.45 0.00 0.00 4.02
592 596 2.325082 GCGTTGCAAGGTCGGTCAT 61.325 57.895 19.45 0.00 0.00 3.06
593 597 1.497278 CGTTGCAAGGTCGGTCATG 59.503 57.895 10.97 0.00 0.00 3.07
594 598 1.227999 CGTTGCAAGGTCGGTCATGT 61.228 55.000 10.97 0.00 0.00 3.21
595 599 0.517316 GTTGCAAGGTCGGTCATGTC 59.483 55.000 0.00 0.00 0.00 3.06
596 600 0.948623 TTGCAAGGTCGGTCATGTCG 60.949 55.000 0.00 0.00 0.00 4.35
597 601 1.374252 GCAAGGTCGGTCATGTCGT 60.374 57.895 10.02 0.00 0.00 4.34
598 602 1.352156 GCAAGGTCGGTCATGTCGTC 61.352 60.000 10.02 5.79 0.00 4.20
599 603 1.071019 CAAGGTCGGTCATGTCGTCG 61.071 60.000 10.02 0.00 0.00 5.12
600 604 1.239296 AAGGTCGGTCATGTCGTCGA 61.239 55.000 10.02 0.00 0.00 4.20
601 605 4.053067 GTCGGTCATGTCGTCGAC 57.947 61.111 18.51 18.51 43.62 4.20
602 606 3.658048 TCGGTCATGTCGTCGACA 58.342 55.556 28.75 28.75 46.90 4.35
603 607 0.793478 GTCGGTCATGTCGTCGACAG 60.793 60.000 29.78 21.50 46.04 3.51
604 608 1.209383 CGGTCATGTCGTCGACAGT 59.791 57.895 29.78 16.82 46.04 3.55
605 609 0.386858 CGGTCATGTCGTCGACAGTT 60.387 55.000 29.78 14.27 46.04 3.16
606 610 1.135888 CGGTCATGTCGTCGACAGTTA 60.136 52.381 29.78 16.47 46.04 2.24
607 611 2.248487 GGTCATGTCGTCGACAGTTAC 58.752 52.381 29.78 24.59 46.04 2.50
608 612 1.903139 GTCATGTCGTCGACAGTTACG 59.097 52.381 29.78 16.62 46.04 3.18
609 613 1.799994 TCATGTCGTCGACAGTTACGA 59.200 47.619 29.78 18.31 46.04 3.43
612 616 2.165380 TCGTCGACAGTTACGAGGG 58.835 57.895 17.16 0.00 42.74 4.30
613 617 0.603707 TCGTCGACAGTTACGAGGGT 60.604 55.000 17.16 0.00 42.74 4.34
614 618 0.453950 CGTCGACAGTTACGAGGGTG 60.454 60.000 17.16 0.00 41.55 4.61
615 619 0.877071 GTCGACAGTTACGAGGGTGA 59.123 55.000 11.55 0.00 40.37 4.02
616 620 0.877071 TCGACAGTTACGAGGGTGAC 59.123 55.000 0.00 0.00 34.85 3.67
617 621 0.453950 CGACAGTTACGAGGGTGACG 60.454 60.000 0.00 0.00 37.70 4.35
618 622 0.731855 GACAGTTACGAGGGTGACGC 60.732 60.000 0.00 0.00 37.70 5.19
619 623 1.177256 ACAGTTACGAGGGTGACGCT 61.177 55.000 0.31 0.31 37.70 5.07
620 624 0.732880 CAGTTACGAGGGTGACGCTG 60.733 60.000 6.97 2.29 37.70 5.18
621 625 0.892358 AGTTACGAGGGTGACGCTGA 60.892 55.000 6.97 0.00 37.70 4.26
622 626 0.456312 GTTACGAGGGTGACGCTGAG 60.456 60.000 6.97 3.51 0.00 3.35
623 627 0.607217 TTACGAGGGTGACGCTGAGA 60.607 55.000 6.97 0.00 0.00 3.27
624 628 0.393944 TACGAGGGTGACGCTGAGAT 60.394 55.000 6.97 0.00 0.00 2.75
625 629 0.393944 ACGAGGGTGACGCTGAGATA 60.394 55.000 6.97 0.00 0.00 1.98
626 630 0.955178 CGAGGGTGACGCTGAGATAT 59.045 55.000 6.97 0.00 0.00 1.63
627 631 2.152016 CGAGGGTGACGCTGAGATATA 58.848 52.381 6.97 0.00 0.00 0.86
628 632 2.095668 CGAGGGTGACGCTGAGATATAC 60.096 54.545 6.97 0.00 0.00 1.47
629 633 2.885266 GAGGGTGACGCTGAGATATACA 59.115 50.000 6.97 0.00 0.00 2.29
630 634 3.501349 AGGGTGACGCTGAGATATACAT 58.499 45.455 0.00 0.00 0.00 2.29
631 635 3.256879 AGGGTGACGCTGAGATATACATG 59.743 47.826 0.00 0.00 0.00 3.21
632 636 2.989840 GGTGACGCTGAGATATACATGC 59.010 50.000 0.00 0.00 0.00 4.06
633 637 3.552890 GGTGACGCTGAGATATACATGCA 60.553 47.826 0.00 0.00 0.00 3.96
634 638 4.051237 GTGACGCTGAGATATACATGCAA 58.949 43.478 0.00 0.00 0.00 4.08
635 639 4.051237 TGACGCTGAGATATACATGCAAC 58.949 43.478 0.00 0.00 0.00 4.17
636 640 4.051237 GACGCTGAGATATACATGCAACA 58.949 43.478 0.00 0.00 0.00 3.33
637 641 3.804325 ACGCTGAGATATACATGCAACAC 59.196 43.478 0.00 0.00 0.00 3.32
638 642 3.185188 CGCTGAGATATACATGCAACACC 59.815 47.826 0.00 0.00 0.00 4.16
639 643 3.185188 GCTGAGATATACATGCAACACCG 59.815 47.826 0.00 0.00 0.00 4.94
640 644 4.371786 CTGAGATATACATGCAACACCGT 58.628 43.478 0.00 0.00 0.00 4.83
641 645 4.368315 TGAGATATACATGCAACACCGTC 58.632 43.478 0.00 0.00 0.00 4.79
642 646 4.142049 TGAGATATACATGCAACACCGTCA 60.142 41.667 0.00 0.00 0.00 4.35
643 647 4.960938 AGATATACATGCAACACCGTCAT 58.039 39.130 0.00 0.00 0.00 3.06
644 648 4.991056 AGATATACATGCAACACCGTCATC 59.009 41.667 0.00 0.00 0.00 2.92
645 649 1.355005 TACATGCAACACCGTCATCG 58.645 50.000 0.00 0.00 0.00 3.84
674 678 4.410400 GGTGGGGGAAGACGGCAG 62.410 72.222 0.00 0.00 0.00 4.85
675 679 3.637273 GTGGGGGAAGACGGCAGT 61.637 66.667 0.00 0.00 0.00 4.40
676 680 2.852075 TGGGGGAAGACGGCAGTT 60.852 61.111 0.00 0.00 0.00 3.16
677 681 2.359975 GGGGGAAGACGGCAGTTG 60.360 66.667 0.00 0.00 0.00 3.16
678 682 2.430367 GGGGAAGACGGCAGTTGT 59.570 61.111 0.00 0.00 0.00 3.32
679 683 1.671379 GGGGAAGACGGCAGTTGTC 60.671 63.158 0.00 0.00 36.60 3.18
686 690 3.112075 CGGCAGTTGTCGTCGCAT 61.112 61.111 0.00 0.00 38.51 4.73
687 691 2.476051 GGCAGTTGTCGTCGCATG 59.524 61.111 0.00 0.00 0.00 4.06
688 692 2.476051 GCAGTTGTCGTCGCATGG 59.524 61.111 0.00 0.00 0.00 3.66
689 693 2.476051 CAGTTGTCGTCGCATGGC 59.524 61.111 0.00 0.00 0.00 4.40
690 694 2.742372 AGTTGTCGTCGCATGGCC 60.742 61.111 0.00 0.00 0.00 5.36
691 695 3.047280 GTTGTCGTCGCATGGCCA 61.047 61.111 8.56 8.56 0.00 5.36
692 696 3.047280 TTGTCGTCGCATGGCCAC 61.047 61.111 8.16 0.00 0.00 5.01
695 699 4.758251 TCGTCGCATGGCCACCAG 62.758 66.667 8.16 1.55 36.75 4.00
697 701 2.672996 GTCGCATGGCCACCAGTT 60.673 61.111 8.16 0.00 36.75 3.16
698 702 2.672651 TCGCATGGCCACCAGTTG 60.673 61.111 8.16 2.36 36.75 3.16
699 703 4.424566 CGCATGGCCACCAGTTGC 62.425 66.667 16.72 16.72 36.75 4.17
704 708 4.947147 GGCCACCAGTTGCCGTCA 62.947 66.667 0.00 0.00 38.00 4.35
705 709 2.672996 GCCACCAGTTGCCGTCAT 60.673 61.111 0.00 0.00 0.00 3.06
706 710 2.981560 GCCACCAGTTGCCGTCATG 61.982 63.158 0.00 0.00 0.00 3.07
707 711 1.600636 CCACCAGTTGCCGTCATGT 60.601 57.895 0.00 0.00 0.00 3.21
708 712 1.575922 CACCAGTTGCCGTCATGTG 59.424 57.895 0.00 0.00 0.00 3.21
709 713 1.600636 ACCAGTTGCCGTCATGTGG 60.601 57.895 0.00 0.00 33.71 4.17
717 721 3.792047 CGTCATGTGGCTGGCGTG 61.792 66.667 0.00 0.00 39.32 5.34
718 722 3.434319 GTCATGTGGCTGGCGTGG 61.434 66.667 0.00 0.00 0.00 4.94
727 731 3.057548 CTGGCGTGGCTGCATGAA 61.058 61.111 0.50 0.00 36.28 2.57
728 732 3.332493 CTGGCGTGGCTGCATGAAC 62.332 63.158 0.50 0.00 36.28 3.18
729 733 4.465512 GGCGTGGCTGCATGAACG 62.466 66.667 0.50 9.96 39.00 3.95
730 734 4.465512 GCGTGGCTGCATGAACGG 62.466 66.667 14.52 0.00 36.57 4.44
731 735 2.741985 CGTGGCTGCATGAACGGA 60.742 61.111 0.50 0.00 32.55 4.69
732 736 2.108514 CGTGGCTGCATGAACGGAT 61.109 57.895 0.50 0.00 32.55 4.18
733 737 1.430632 GTGGCTGCATGAACGGATG 59.569 57.895 0.50 0.00 0.00 3.51
734 738 1.750018 TGGCTGCATGAACGGATGG 60.750 57.895 0.50 0.00 0.00 3.51
735 739 1.451927 GGCTGCATGAACGGATGGA 60.452 57.895 0.50 0.00 0.00 3.41
736 740 1.031571 GGCTGCATGAACGGATGGAA 61.032 55.000 0.50 0.00 0.00 3.53
737 741 0.379669 GCTGCATGAACGGATGGAAG 59.620 55.000 0.00 0.00 0.00 3.46
738 742 2.013563 GCTGCATGAACGGATGGAAGA 61.014 52.381 0.00 0.00 0.00 2.87
739 743 2.358957 CTGCATGAACGGATGGAAGAA 58.641 47.619 0.00 0.00 0.00 2.52
740 744 2.353889 CTGCATGAACGGATGGAAGAAG 59.646 50.000 0.00 0.00 0.00 2.85
741 745 1.672881 GCATGAACGGATGGAAGAAGG 59.327 52.381 0.00 0.00 0.00 3.46
742 746 2.292267 CATGAACGGATGGAAGAAGGG 58.708 52.381 0.00 0.00 0.00 3.95
743 747 0.618458 TGAACGGATGGAAGAAGGGG 59.382 55.000 0.00 0.00 0.00 4.79
744 748 0.909623 GAACGGATGGAAGAAGGGGA 59.090 55.000 0.00 0.00 0.00 4.81
745 749 0.912486 AACGGATGGAAGAAGGGGAG 59.088 55.000 0.00 0.00 0.00 4.30
746 750 0.252742 ACGGATGGAAGAAGGGGAGT 60.253 55.000 0.00 0.00 0.00 3.85
747 751 0.179000 CGGATGGAAGAAGGGGAGTG 59.821 60.000 0.00 0.00 0.00 3.51
748 752 1.584724 GGATGGAAGAAGGGGAGTGA 58.415 55.000 0.00 0.00 0.00 3.41
749 753 2.131023 GGATGGAAGAAGGGGAGTGAT 58.869 52.381 0.00 0.00 0.00 3.06
750 754 2.158696 GGATGGAAGAAGGGGAGTGATG 60.159 54.545 0.00 0.00 0.00 3.07
751 755 0.620556 TGGAAGAAGGGGAGTGATGC 59.379 55.000 0.00 0.00 0.00 3.91
752 756 0.620556 GGAAGAAGGGGAGTGATGCA 59.379 55.000 0.00 0.00 0.00 3.96
753 757 1.407989 GGAAGAAGGGGAGTGATGCAG 60.408 57.143 0.00 0.00 0.00 4.41
754 758 0.034670 AAGAAGGGGAGTGATGCAGC 60.035 55.000 0.00 0.00 0.00 5.25
755 759 0.913451 AGAAGGGGAGTGATGCAGCT 60.913 55.000 2.53 0.00 0.00 4.24
756 760 0.747283 GAAGGGGAGTGATGCAGCTG 60.747 60.000 10.11 10.11 0.00 4.24
757 761 1.495579 AAGGGGAGTGATGCAGCTGT 61.496 55.000 16.64 0.00 0.00 4.40
758 762 1.451028 GGGGAGTGATGCAGCTGTC 60.451 63.158 16.64 6.47 0.00 3.51
759 763 1.297689 GGGAGTGATGCAGCTGTCA 59.702 57.895 16.64 14.12 0.00 3.58
760 764 0.321919 GGGAGTGATGCAGCTGTCAA 60.322 55.000 16.64 1.65 0.00 3.18
761 765 0.801251 GGAGTGATGCAGCTGTCAAC 59.199 55.000 16.64 12.69 0.00 3.18
762 766 0.441533 GAGTGATGCAGCTGTCAACG 59.558 55.000 16.64 0.00 0.00 4.10
763 767 0.033920 AGTGATGCAGCTGTCAACGA 59.966 50.000 16.64 1.95 0.00 3.85
764 768 0.441533 GTGATGCAGCTGTCAACGAG 59.558 55.000 16.64 0.00 0.00 4.18
765 769 1.293963 TGATGCAGCTGTCAACGAGC 61.294 55.000 16.64 0.00 36.65 5.03
766 770 2.288926 GATGCAGCTGTCAACGAGCG 62.289 60.000 16.64 0.00 41.61 5.03
767 771 2.734723 GCAGCTGTCAACGAGCGA 60.735 61.111 16.64 0.00 41.61 4.93
768 772 2.310233 GCAGCTGTCAACGAGCGAA 61.310 57.895 16.64 0.00 41.61 4.70
769 773 1.488957 CAGCTGTCAACGAGCGAAC 59.511 57.895 5.25 0.00 41.61 3.95
770 774 1.664965 AGCTGTCAACGAGCGAACC 60.665 57.895 0.00 0.00 41.61 3.62
771 775 1.954146 GCTGTCAACGAGCGAACCA 60.954 57.895 0.00 0.00 0.00 3.67
774 778 0.948623 TGTCAACGAGCGAACCATGG 60.949 55.000 11.19 11.19 0.00 3.66
781 785 2.440247 GCGAACCATGGAAGGGGG 60.440 66.667 21.47 2.21 46.47 5.40
803 807 2.682494 GCGTGGGGTAGGGACAGA 60.682 66.667 0.00 0.00 0.00 3.41
816 820 0.037232 GGACAGAAGGACGAACTGGG 60.037 60.000 0.00 0.00 36.17 4.45
826 830 3.133003 AGGACGAACTGGGTCAATCTATG 59.867 47.826 0.00 0.00 36.12 2.23
834 838 4.474651 ACTGGGTCAATCTATGTTGGATGA 59.525 41.667 0.00 0.00 0.00 2.92
836 840 5.379187 TGGGTCAATCTATGTTGGATGATG 58.621 41.667 0.00 0.00 0.00 3.07
840 844 5.410746 GTCAATCTATGTTGGATGATGCGAT 59.589 40.000 0.00 0.00 0.00 4.58
843 847 5.982890 TCTATGTTGGATGATGCGATCTA 57.017 39.130 0.00 0.00 0.00 1.98
844 848 5.958955 TCTATGTTGGATGATGCGATCTAG 58.041 41.667 0.00 0.00 0.00 2.43
847 851 4.814147 TGTTGGATGATGCGATCTAGATC 58.186 43.478 20.93 20.93 34.56 2.75
1060 1066 3.058160 CTGCCGCCCTTGAACCAG 61.058 66.667 0.00 0.00 0.00 4.00
1233 1245 0.970937 TTCCTACGGCTGGTGAGGAG 60.971 60.000 11.60 0.00 39.25 3.69
1473 1485 1.202510 GGTTGTGTTGCCTTCATTGCA 60.203 47.619 0.00 0.00 36.84 4.08
1519 1531 0.107993 TGCTCATCACTGCCTACTGC 60.108 55.000 0.00 0.00 41.77 4.40
1607 1619 2.584835 TCTGGTGGAAGTGAAATGGG 57.415 50.000 0.00 0.00 0.00 4.00
1666 1678 6.727824 TTCTACTTTGCTCATGCTTTCTAC 57.272 37.500 0.00 0.00 40.48 2.59
1753 1765 1.837439 TGGCCGTTCATTGTCCTAGAT 59.163 47.619 0.00 0.00 0.00 1.98
1769 1781 8.118976 TGTCCTAGATGTATAAGTAAATCGGG 57.881 38.462 0.00 0.00 31.02 5.14
1772 1784 7.233962 TCCTAGATGTATAAGTAAATCGGGCAA 59.766 37.037 0.00 0.00 31.02 4.52
1782 1794 6.169557 AGTAAATCGGGCAATCTGTATACA 57.830 37.500 5.25 5.25 0.00 2.29
1799 1811 1.985473 ACACATTGTGCATCCACTGT 58.015 45.000 16.62 0.00 42.54 3.55
2018 2030 9.165035 CAAACAGGTATGGATTTTGCAAAATAT 57.835 29.630 31.79 24.83 38.64 1.28
2071 2103 6.652481 TGCAGAGAAAAACCTCTAATTCTCAG 59.348 38.462 14.61 9.04 46.45 3.35
2074 2106 8.934825 CAGAGAAAAACCTCTAATTCTCAGAAG 58.065 37.037 14.61 1.36 46.45 2.85
2157 2190 3.922240 GCAAGGAACTGTATGTGCATTTG 59.078 43.478 0.00 0.00 40.86 2.32
2232 2266 4.582701 ATCAACAATGTTTTCAAGGCGA 57.417 36.364 0.00 0.00 0.00 5.54
2236 2270 6.507900 TCAACAATGTTTTCAAGGCGATAAA 58.492 32.000 0.00 0.00 0.00 1.40
2248 2283 1.432270 GCGATAAAGCGAGCAAGGCT 61.432 55.000 0.00 0.00 43.88 4.58
2301 2336 1.595109 CATAAGGCGAGGCGATGCA 60.595 57.895 0.00 0.00 0.00 3.96
2465 2501 2.039480 TGCCTCTGAACTTGAGCTTCAT 59.961 45.455 0.00 0.00 0.00 2.57
2489 2525 3.065510 CCCCTCATCTATACATCGCTACG 59.934 52.174 0.00 0.00 0.00 3.51
2601 2637 1.321474 CCAGAAAGGTGCTGCTTCAA 58.679 50.000 0.00 0.00 32.06 2.69
2655 2691 8.940952 CACTGGAGTAAAATTTTCCTCTCTAAG 58.059 37.037 19.29 18.63 32.12 2.18
2695 2731 3.885976 TCCAAGTTGGGTTGTTGGATA 57.114 42.857 21.85 0.00 43.87 2.59
2731 2767 8.394040 TCCTAGGATCATTAGACAGATCATACA 58.606 37.037 7.62 0.00 41.84 2.29
2749 2785 0.038166 CACATTACCAGGTGGCAGGT 59.962 55.000 0.76 2.25 41.89 4.00
2753 2789 2.124507 TTACCAGGTGGCAGGTGCTC 62.125 60.000 0.76 0.00 38.87 4.26
2803 2839 0.246635 GCAGCGACACTAAGGAAGGA 59.753 55.000 0.00 0.00 0.00 3.36
2853 2889 5.463061 GCAGATGTAGATGAGAAGAAGAAGC 59.537 44.000 0.00 0.00 0.00 3.86
2903 2939 1.360192 GCCAGGCACACACAGAAAC 59.640 57.895 6.55 0.00 0.00 2.78
2912 2948 0.583438 CACACAGAAACAGAGCACCG 59.417 55.000 0.00 0.00 0.00 4.94
2915 2951 2.032681 AGAAACAGAGCACCGGGC 59.967 61.111 6.32 6.61 45.30 6.13
2930 2966 1.890174 GGGCGGGGATGAAAACAAG 59.110 57.895 0.00 0.00 0.00 3.16
2959 2995 1.208706 GGAGAAGAGAAAGGAGGGGG 58.791 60.000 0.00 0.00 0.00 5.40
3037 3073 1.341778 GGGGAGTAGAAACCGGAGAGA 60.342 57.143 9.46 0.00 0.00 3.10
3040 3076 3.119065 GGGAGTAGAAACCGGAGAGAAAG 60.119 52.174 9.46 0.00 0.00 2.62
3119 3155 0.909623 GGACGGGATGGAAGGAAGAA 59.090 55.000 0.00 0.00 0.00 2.52
3120 3156 1.134371 GGACGGGATGGAAGGAAGAAG 60.134 57.143 0.00 0.00 0.00 2.85
3121 3157 1.555533 GACGGGATGGAAGGAAGAAGT 59.444 52.381 0.00 0.00 0.00 3.01
3122 3158 2.764572 GACGGGATGGAAGGAAGAAGTA 59.235 50.000 0.00 0.00 0.00 2.24
3123 3159 2.766828 ACGGGATGGAAGGAAGAAGTAG 59.233 50.000 0.00 0.00 0.00 2.57
3124 3160 3.031736 CGGGATGGAAGGAAGAAGTAGA 58.968 50.000 0.00 0.00 0.00 2.59
3125 3161 3.181474 CGGGATGGAAGGAAGAAGTAGAC 60.181 52.174 0.00 0.00 0.00 2.59
3126 3162 3.181474 GGGATGGAAGGAAGAAGTAGACG 60.181 52.174 0.00 0.00 0.00 4.18
3127 3163 3.700038 GGATGGAAGGAAGAAGTAGACGA 59.300 47.826 0.00 0.00 0.00 4.20
3130 3184 2.427812 GGAAGGAAGAAGTAGACGAGGG 59.572 54.545 0.00 0.00 0.00 4.30
3151 3205 1.675552 GGGAAGAGAGAGAGGACGAG 58.324 60.000 0.00 0.00 0.00 4.18
3159 3213 0.393808 AGAGAGGACGAGAGCCAGAC 60.394 60.000 0.00 0.00 0.00 3.51
3160 3214 1.379309 AGAGGACGAGAGCCAGACC 60.379 63.158 0.00 0.00 0.00 3.85
3161 3215 1.379309 GAGGACGAGAGCCAGACCT 60.379 63.158 0.00 0.00 0.00 3.85
3162 3216 0.968393 GAGGACGAGAGCCAGACCTT 60.968 60.000 0.00 0.00 0.00 3.50
3163 3217 1.216710 GGACGAGAGCCAGACCTTG 59.783 63.158 0.00 0.00 0.00 3.61
3164 3218 1.446966 GACGAGAGCCAGACCTTGC 60.447 63.158 0.00 0.00 0.00 4.01
3165 3219 1.882989 GACGAGAGCCAGACCTTGCT 61.883 60.000 0.00 0.00 41.42 3.91
3166 3220 1.447489 CGAGAGCCAGACCTTGCTG 60.447 63.158 0.00 0.00 38.11 4.41
3167 3221 1.744741 GAGAGCCAGACCTTGCTGC 60.745 63.158 0.00 0.00 38.11 5.25
3168 3222 3.123620 GAGCCAGACCTTGCTGCG 61.124 66.667 0.00 0.00 38.11 5.18
3171 3225 3.429141 CCAGACCTTGCTGCGCTG 61.429 66.667 9.73 10.04 34.56 5.18
3172 3226 4.099170 CAGACCTTGCTGCGCTGC 62.099 66.667 29.76 29.76 0.00 5.25
3173 3227 4.326507 AGACCTTGCTGCGCTGCT 62.327 61.111 34.26 18.34 0.00 4.24
3174 3228 4.099170 GACCTTGCTGCGCTGCTG 62.099 66.667 34.26 26.23 0.00 4.41
3221 3275 0.033894 GAGACCGGAGAGGAGGAAGT 60.034 60.000 9.46 0.00 45.00 3.01
3226 3280 1.544825 CGGAGAGGAGGAAGTTGGCA 61.545 60.000 0.00 0.00 0.00 4.92
3241 3295 3.117171 GCACAGAGCTGAGCCGTG 61.117 66.667 13.08 13.08 40.51 4.94
3246 3300 4.057428 GAGCTGAGCCGTGGACGT 62.057 66.667 0.00 0.00 37.74 4.34
3303 3357 1.464219 GAGCTCTTTCTCTGCAAGCAC 59.536 52.381 6.43 0.00 35.42 4.40
3312 3366 0.606401 TCTGCAAGCACTTGGGTAGC 60.606 55.000 12.09 0.00 40.74 3.58
3316 3370 0.962356 CAAGCACTTGGGTAGCCTGG 60.962 60.000 13.11 7.31 36.95 4.45
3361 3415 3.047877 ACCTTACTTGCGCGCCAC 61.048 61.111 30.77 0.92 0.00 5.01
3362 3416 3.047280 CCTTACTTGCGCGCCACA 61.047 61.111 30.77 11.87 0.00 4.17
3363 3417 2.476051 CTTACTTGCGCGCCACAG 59.524 61.111 30.77 23.15 0.00 3.66
3364 3418 2.280524 TTACTTGCGCGCCACAGT 60.281 55.556 30.77 27.33 0.00 3.55
3365 3419 2.227968 CTTACTTGCGCGCCACAGTC 62.228 60.000 30.77 0.00 0.00 3.51
3382 3436 2.045926 CCTGCCCTTGTTCCCTCG 60.046 66.667 0.00 0.00 0.00 4.63
3423 3477 0.176680 CCTGCTCTGACTATGGCGTT 59.823 55.000 0.00 0.00 0.00 4.84
3660 3714 8.077991 TGTGGTATGCTACGTGATATACTAAAC 58.922 37.037 0.00 5.50 0.00 2.01
3904 3958 6.467677 TCAAAGATTTCTAGTAACAGCAGCT 58.532 36.000 0.00 0.00 0.00 4.24
3966 4020 5.422012 AGATGGTTTTGAGGTCACAAAGTTT 59.578 36.000 0.00 0.00 40.15 2.66
4052 4106 2.426738 CTGTTTTGTGGGTTCTCAAGCA 59.573 45.455 0.00 0.00 0.00 3.91
4113 4167 9.952188 GCTGTTTTATAATAGGAAGAATGTTCC 57.048 33.333 0.22 0.22 38.86 3.62
4248 4302 4.081476 TCTGATGACCCAACTCATGTGTAG 60.081 45.833 0.00 0.00 30.62 2.74
4274 4328 3.253220 TGTGCCTCTACCTTTTTCCCTA 58.747 45.455 0.00 0.00 0.00 3.53
4356 4411 9.379791 CCCTTTTCTACATGGTTACTAACTTAG 57.620 37.037 0.00 0.00 0.00 2.18
4834 4894 4.312443 CTTTGCTTCATTGCTTGGACATT 58.688 39.130 0.00 0.00 0.00 2.71
4852 4912 6.041409 TGGACATTCCTGTTTGCTCAATTTTA 59.959 34.615 0.00 0.00 37.46 1.52
4912 4972 3.803340 TGATTAGAGACAAGGGGGAACT 58.197 45.455 0.00 0.00 0.00 3.01
4913 4973 3.519510 TGATTAGAGACAAGGGGGAACTG 59.480 47.826 0.00 0.00 0.00 3.16
5178 5240 6.950041 TCAGATGATCAGAAGGAAAAATTGGT 59.050 34.615 0.09 0.00 0.00 3.67
5338 5559 0.890683 CACATGGCTCCTTTTCACCC 59.109 55.000 0.00 0.00 0.00 4.61
5439 5660 2.328099 GCAAGTGAGAAGGTGGCGG 61.328 63.158 0.00 0.00 0.00 6.13
5472 5693 6.967199 GGAAGTTCTAACGCAATTTCCATTAG 59.033 38.462 2.25 0.00 38.75 1.73
5491 5712 7.987458 TCCATTAGGATAATGTTGAAGAGACAC 59.013 37.037 8.32 0.00 39.61 3.67
5675 5896 3.023119 TGGCTGCTTGAAACTTCTCAAA 58.977 40.909 0.00 0.00 34.96 2.69
5677 5898 4.099881 TGGCTGCTTGAAACTTCTCAAAAT 59.900 37.500 0.00 0.00 34.96 1.82
5678 5899 4.683320 GGCTGCTTGAAACTTCTCAAAATC 59.317 41.667 0.00 0.00 34.96 2.17
5679 5900 5.508657 GGCTGCTTGAAACTTCTCAAAATCT 60.509 40.000 0.00 0.00 34.96 2.40
5837 6058 7.002879 AGTTGCTTATTGGATTCATGCTCTAT 58.997 34.615 0.00 0.00 0.00 1.98
5842 6063 8.975439 GCTTATTGGATTCATGCTCTATTTTTG 58.025 33.333 0.00 0.00 0.00 2.44
5930 6151 4.047883 ACAAAAGGCCTCCTCAGGTATAT 58.952 43.478 5.23 0.00 42.74 0.86
5984 6205 3.258722 AGGACAAACCCAAATGGACAT 57.741 42.857 0.00 0.00 40.05 3.06
5985 6206 4.396357 AGGACAAACCCAAATGGACATA 57.604 40.909 0.00 0.00 40.05 2.29
5986 6207 4.746466 AGGACAAACCCAAATGGACATAA 58.254 39.130 0.00 0.00 40.05 1.90
5987 6208 4.526650 AGGACAAACCCAAATGGACATAAC 59.473 41.667 0.00 0.00 40.05 1.89
5988 6209 4.526650 GGACAAACCCAAATGGACATAACT 59.473 41.667 0.00 0.00 37.39 2.24
5989 6210 5.336451 GGACAAACCCAAATGGACATAACTC 60.336 44.000 0.00 0.00 37.39 3.01
5990 6211 5.144100 ACAAACCCAAATGGACATAACTCA 58.856 37.500 0.00 0.00 37.39 3.41
5999 6220 8.739039 CCAAATGGACATAACTCATAAGACAAA 58.261 33.333 0.00 0.00 37.39 2.83
6060 6281 5.221601 CCACATACATCTGACTATCTGCCTT 60.222 44.000 0.00 0.00 0.00 4.35
6174 6398 3.030291 ACAAAGTTCATCTGGCCAACAA 58.970 40.909 7.01 0.00 0.00 2.83
6202 6426 1.437625 TGACAGTGTGTGTGTGTGTG 58.562 50.000 0.00 0.00 40.56 3.82
6204 6428 1.128507 GACAGTGTGTGTGTGTGTGTG 59.871 52.381 0.00 0.00 40.56 3.82
6243 7031 8.574251 TGTACAGCAGTCATAATAAATTTGGT 57.426 30.769 0.00 0.00 0.00 3.67
6244 7032 9.019656 TGTACAGCAGTCATAATAAATTTGGTT 57.980 29.630 0.00 0.00 0.00 3.67
6245 7033 9.289303 GTACAGCAGTCATAATAAATTTGGTTG 57.711 33.333 0.00 0.00 0.00 3.77
6246 7034 7.322664 ACAGCAGTCATAATAAATTTGGTTGG 58.677 34.615 0.00 0.00 0.00 3.77
6247 7035 7.178274 ACAGCAGTCATAATAAATTTGGTTGGA 59.822 33.333 0.00 0.00 0.00 3.53
6248 7036 7.489113 CAGCAGTCATAATAAATTTGGTTGGAC 59.511 37.037 0.00 8.26 0.00 4.02
6249 7037 7.397192 AGCAGTCATAATAAATTTGGTTGGACT 59.603 33.333 0.00 10.02 32.56 3.85
6250 7038 7.489113 GCAGTCATAATAAATTTGGTTGGACTG 59.511 37.037 25.84 25.84 46.75 3.51
6251 7039 8.522830 CAGTCATAATAAATTTGGTTGGACTGT 58.477 33.333 24.23 0.00 41.97 3.55
6252 7040 8.522830 AGTCATAATAAATTTGGTTGGACTGTG 58.477 33.333 16.89 0.00 31.32 3.66
6253 7041 7.759433 GTCATAATAAATTTGGTTGGACTGTGG 59.241 37.037 0.00 0.00 0.00 4.17
6254 7042 7.671819 TCATAATAAATTTGGTTGGACTGTGGA 59.328 33.333 0.00 0.00 0.00 4.02
6255 7043 5.982890 ATAAATTTGGTTGGACTGTGGAG 57.017 39.130 0.00 0.00 0.00 3.86
6256 7044 3.593442 AATTTGGTTGGACTGTGGAGA 57.407 42.857 0.00 0.00 0.00 3.71
6257 7045 3.814504 ATTTGGTTGGACTGTGGAGAT 57.185 42.857 0.00 0.00 0.00 2.75
6258 7046 2.566833 TTGGTTGGACTGTGGAGATG 57.433 50.000 0.00 0.00 0.00 2.90
6259 7047 1.728323 TGGTTGGACTGTGGAGATGA 58.272 50.000 0.00 0.00 0.00 2.92
6260 7048 2.054021 TGGTTGGACTGTGGAGATGAA 58.946 47.619 0.00 0.00 0.00 2.57
6261 7049 2.038952 TGGTTGGACTGTGGAGATGAAG 59.961 50.000 0.00 0.00 0.00 3.02
6262 7050 2.616510 GGTTGGACTGTGGAGATGAAGG 60.617 54.545 0.00 0.00 0.00 3.46
6263 7051 1.279496 TGGACTGTGGAGATGAAGGG 58.721 55.000 0.00 0.00 0.00 3.95
6264 7052 1.203300 TGGACTGTGGAGATGAAGGGA 60.203 52.381 0.00 0.00 0.00 4.20
6265 7053 1.484240 GGACTGTGGAGATGAAGGGAG 59.516 57.143 0.00 0.00 0.00 4.30
6266 7054 2.183679 GACTGTGGAGATGAAGGGAGT 58.816 52.381 0.00 0.00 0.00 3.85
6267 7055 3.366396 GACTGTGGAGATGAAGGGAGTA 58.634 50.000 0.00 0.00 0.00 2.59
6268 7056 3.100671 ACTGTGGAGATGAAGGGAGTAC 58.899 50.000 0.00 0.00 0.00 2.73
6269 7057 3.099905 CTGTGGAGATGAAGGGAGTACA 58.900 50.000 0.00 0.00 0.00 2.90
6270 7058 3.515502 CTGTGGAGATGAAGGGAGTACAA 59.484 47.826 0.00 0.00 0.00 2.41
6271 7059 4.104086 TGTGGAGATGAAGGGAGTACAAT 58.896 43.478 0.00 0.00 0.00 2.71
6272 7060 4.080919 TGTGGAGATGAAGGGAGTACAATG 60.081 45.833 0.00 0.00 0.00 2.82
6273 7061 4.080863 GTGGAGATGAAGGGAGTACAATGT 60.081 45.833 0.00 0.00 0.00 2.71
6274 7062 4.536090 TGGAGATGAAGGGAGTACAATGTT 59.464 41.667 0.00 0.00 0.00 2.71
6275 7063 5.119694 GGAGATGAAGGGAGTACAATGTTC 58.880 45.833 0.00 0.00 0.00 3.18
6276 7064 5.338381 GGAGATGAAGGGAGTACAATGTTCA 60.338 44.000 0.00 0.00 0.00 3.18
6277 7065 6.126863 AGATGAAGGGAGTACAATGTTCAA 57.873 37.500 0.00 0.00 0.00 2.69
6278 7066 6.542821 AGATGAAGGGAGTACAATGTTCAAA 58.457 36.000 0.00 0.00 0.00 2.69
6279 7067 6.656693 AGATGAAGGGAGTACAATGTTCAAAG 59.343 38.462 0.00 0.00 0.00 2.77
6280 7068 5.935945 TGAAGGGAGTACAATGTTCAAAGA 58.064 37.500 0.00 0.00 0.00 2.52
6281 7069 6.361433 TGAAGGGAGTACAATGTTCAAAGAA 58.639 36.000 0.00 0.00 0.00 2.52
6282 7070 7.004086 TGAAGGGAGTACAATGTTCAAAGAAT 58.996 34.615 0.00 0.00 0.00 2.40
6283 7071 6.824305 AGGGAGTACAATGTTCAAAGAATG 57.176 37.500 0.00 0.00 0.00 2.67
6284 7072 5.183904 AGGGAGTACAATGTTCAAAGAATGC 59.816 40.000 0.00 0.00 0.00 3.56
6285 7073 5.048083 GGGAGTACAATGTTCAAAGAATGCA 60.048 40.000 0.00 0.00 0.00 3.96
6286 7074 5.858581 GGAGTACAATGTTCAAAGAATGCAC 59.141 40.000 0.00 0.00 0.00 4.57
6287 7075 6.389830 AGTACAATGTTCAAAGAATGCACA 57.610 33.333 0.00 0.00 39.51 4.57
6288 7076 6.804677 AGTACAATGTTCAAAGAATGCACAA 58.195 32.000 0.00 0.00 38.67 3.33
6289 7077 7.264221 AGTACAATGTTCAAAGAATGCACAAA 58.736 30.769 0.00 0.00 38.67 2.83
6290 7078 6.592798 ACAATGTTCAAAGAATGCACAAAG 57.407 33.333 0.00 0.00 38.67 2.77
6291 7079 6.108015 ACAATGTTCAAAGAATGCACAAAGT 58.892 32.000 0.00 0.00 38.67 2.66
6292 7080 6.594937 ACAATGTTCAAAGAATGCACAAAGTT 59.405 30.769 0.00 0.00 38.67 2.66
6293 7081 6.833342 ATGTTCAAAGAATGCACAAAGTTC 57.167 33.333 0.00 0.00 38.67 3.01
6294 7082 5.718146 TGTTCAAAGAATGCACAAAGTTCA 58.282 33.333 0.00 0.00 32.03 3.18
6308 7104 0.330604 AGTTCATCTGGCCAGCACAT 59.669 50.000 28.91 13.94 0.00 3.21
6310 7106 1.672881 GTTCATCTGGCCAGCACATAC 59.327 52.381 28.91 16.82 0.00 2.39
6311 7107 0.181114 TCATCTGGCCAGCACATACC 59.819 55.000 28.91 0.00 0.00 2.73
6315 7111 0.394762 CTGGCCAGCACATACCACAT 60.395 55.000 22.33 0.00 0.00 3.21
6316 7112 0.680601 TGGCCAGCACATACCACATG 60.681 55.000 0.00 0.00 0.00 3.21
6320 7116 2.011947 CCAGCACATACCACATGACTG 58.988 52.381 0.00 0.00 0.00 3.51
6334 7130 6.538189 CACATGACTGTGTGTGTGTTATTA 57.462 37.500 0.00 0.00 46.33 0.98
6335 7131 7.132694 CACATGACTGTGTGTGTGTTATTAT 57.867 36.000 0.00 0.00 46.33 1.28
6336 7132 7.584108 CACATGACTGTGTGTGTGTTATTATT 58.416 34.615 0.00 0.00 46.33 1.40
6338 7134 9.278978 ACATGACTGTGTGTGTGTTATTATTAA 57.721 29.630 0.00 0.00 33.22 1.40
6350 7146 9.689976 GTGTGTTATTATTAATTATGCATGGCA 57.310 29.630 10.16 0.00 44.86 4.92
6351 7147 9.911138 TGTGTTATTATTAATTATGCATGGCAG 57.089 29.630 10.16 0.00 43.65 4.85
6352 7148 9.912634 GTGTTATTATTAATTATGCATGGCAGT 57.087 29.630 10.16 0.00 43.65 4.40
6403 7199 4.086457 TGAAGGGAGAATGGGCTAAAAAC 58.914 43.478 0.00 0.00 0.00 2.43
6479 7275 2.989909 TCGAGCATCCATCACAATTGT 58.010 42.857 4.92 4.92 0.00 2.71
6481 7277 3.758023 TCGAGCATCCATCACAATTGTTT 59.242 39.130 8.77 0.00 0.00 2.83
6549 7362 4.160439 CCAACCAGCTCTATGAGTTAGTCA 59.840 45.833 0.00 0.00 40.38 3.41
6631 7446 9.477484 GTTGATTACGAGGAAGTTGATATATGT 57.523 33.333 0.00 0.00 0.00 2.29
7162 8142 8.027771 GCTAGTGTAGATGTTACAGTAAGTTGT 58.972 37.037 0.00 0.00 34.19 3.32
7174 8154 9.182933 GTTACAGTAAGTTGTTTTGTTTCACAA 57.817 29.630 0.00 0.00 32.78 3.33
7372 8357 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
7374 8359 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
7376 8361 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
7378 8363 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
7380 8365 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
7381 8366 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
7430 8415 3.016736 GGGTCTGATGGTTGTGGTATTG 58.983 50.000 0.00 0.00 0.00 1.90
7644 8634 5.638234 AGAAGGTCGGTTATTCTTTCTTTCG 59.362 40.000 0.00 0.00 28.99 3.46
7698 8688 0.548510 AAGATGCTAACCCTCCCTGC 59.451 55.000 0.00 0.00 0.00 4.85
7836 8826 0.321034 ACATGATCCCATCGCCGATG 60.321 55.000 19.87 19.87 39.52 3.84
7909 8899 4.571984 TCTCCGCACAATCATATGACAAAG 59.428 41.667 7.78 0.96 0.00 2.77
7920 8910 8.767085 CAATCATATGACAAAGTGTTGCTTTTT 58.233 29.630 7.78 0.00 44.41 1.94
7945 8935 8.427902 TTCCAGATAGTATATGTGCTCTCATT 57.572 34.615 4.17 0.00 0.00 2.57
8307 9306 1.660264 CTCACACAGCACGCGTGTA 60.660 57.895 36.80 14.84 45.63 2.90
8313 9312 1.235281 ACAGCACGCGTGTAGAGAGA 61.235 55.000 36.80 0.00 0.00 3.10
8414 9443 2.126734 CGTAAACCGACCGCTCGT 60.127 61.111 0.00 0.00 38.32 4.18
8831 9860 2.545810 CTCAGGGAGGAAGAGGACTTT 58.454 52.381 0.00 0.00 36.39 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.049674 CGCGGTGTTGCAGGTCAT 61.050 61.111 0.00 0.00 34.15 3.06
49 51 4.803426 CACCGACTCCAGCGAGGC 62.803 72.222 0.00 0.00 41.25 4.70
54 56 0.601558 TCTACAACACCGACTCCAGC 59.398 55.000 0.00 0.00 0.00 4.85
58 60 1.699343 GCACTCTACAACACCGACTC 58.301 55.000 0.00 0.00 0.00 3.36
61 63 1.372499 GCGCACTCTACAACACCGA 60.372 57.895 0.30 0.00 0.00 4.69
70 72 2.262603 CTGCACTGGCGCACTCTA 59.737 61.111 10.83 0.00 45.35 2.43
108 112 0.957888 GCTCTTCAACACCAGGCTCC 60.958 60.000 0.00 0.00 0.00 4.70
114 118 0.966179 TAGAGCGCTCTTCAACACCA 59.034 50.000 42.00 21.00 40.93 4.17
141 145 0.247974 CTCCCACGACGATGTACGAC 60.248 60.000 0.00 0.00 45.77 4.34
142 146 0.674581 ACTCCCACGACGATGTACGA 60.675 55.000 0.00 0.00 45.77 3.43
144 148 0.801067 GCACTCCCACGACGATGTAC 60.801 60.000 0.00 0.00 0.00 2.90
148 152 2.885861 GAGCACTCCCACGACGAT 59.114 61.111 0.00 0.00 0.00 3.73
149 153 3.733960 CGAGCACTCCCACGACGA 61.734 66.667 0.00 0.00 0.00 4.20
152 156 3.680786 CACCGAGCACTCCCACGA 61.681 66.667 0.00 0.00 0.00 4.35
153 157 3.515316 AACACCGAGCACTCCCACG 62.515 63.158 0.00 0.00 0.00 4.94
164 168 4.717629 CGCTCTCCGCAACACCGA 62.718 66.667 0.00 0.00 39.08 4.69
167 171 3.470567 CGACGCTCTCCGCAACAC 61.471 66.667 0.00 0.00 41.76 3.32
195 199 1.146358 CGGCCGCGGAAAAACAAAAA 61.146 50.000 33.48 0.00 0.00 1.94
196 200 1.589196 CGGCCGCGGAAAAACAAAA 60.589 52.632 33.48 0.00 0.00 2.44
197 201 2.026301 CGGCCGCGGAAAAACAAA 59.974 55.556 33.48 0.00 0.00 2.83
200 204 4.753877 GCTCGGCCGCGGAAAAAC 62.754 66.667 33.48 10.82 0.00 2.43
208 212 4.752879 TGGTTACTGCTCGGCCGC 62.753 66.667 23.51 8.23 0.00 6.53
210 214 1.078426 ACATGGTTACTGCTCGGCC 60.078 57.895 0.00 0.00 0.00 6.13
213 217 1.920574 CTTCGACATGGTTACTGCTCG 59.079 52.381 0.00 0.00 0.00 5.03
246 250 4.360964 TTGCATTGCAGCACCGGC 62.361 61.111 11.76 0.00 45.61 6.13
247 251 1.585267 TACTTGCATTGCAGCACCGG 61.585 55.000 11.76 0.00 45.61 5.28
248 252 0.452987 ATACTTGCATTGCAGCACCG 59.547 50.000 11.76 2.51 45.61 4.94
249 253 1.917273 CATACTTGCATTGCAGCACC 58.083 50.000 11.76 0.00 45.61 5.01
269 273 0.111253 AGTTCCAGGAGCAAGGGTTG 59.889 55.000 6.02 0.00 0.00 3.77
270 274 1.351350 GTAGTTCCAGGAGCAAGGGTT 59.649 52.381 6.02 0.00 0.00 4.11
271 275 0.984995 GTAGTTCCAGGAGCAAGGGT 59.015 55.000 6.02 0.00 0.00 4.34
272 276 0.984230 TGTAGTTCCAGGAGCAAGGG 59.016 55.000 6.02 0.00 0.00 3.95
273 277 1.673033 CGTGTAGTTCCAGGAGCAAGG 60.673 57.143 6.02 0.00 0.00 3.61
274 278 1.272490 TCGTGTAGTTCCAGGAGCAAG 59.728 52.381 6.02 0.00 0.00 4.01
275 279 1.334160 TCGTGTAGTTCCAGGAGCAA 58.666 50.000 6.02 0.00 0.00 3.91
276 280 1.476891 GATCGTGTAGTTCCAGGAGCA 59.523 52.381 6.02 0.00 36.10 4.26
277 281 1.751924 AGATCGTGTAGTTCCAGGAGC 59.248 52.381 0.00 0.00 36.25 4.70
278 282 3.283751 AGAGATCGTGTAGTTCCAGGAG 58.716 50.000 0.00 0.00 33.24 3.69
279 283 3.280295 GAGAGATCGTGTAGTTCCAGGA 58.720 50.000 0.00 0.00 34.14 3.86
280 284 2.359531 GGAGAGATCGTGTAGTTCCAGG 59.640 54.545 0.00 0.00 0.00 4.45
281 285 2.032302 CGGAGAGATCGTGTAGTTCCAG 59.968 54.545 0.00 0.00 0.00 3.86
282 286 2.014857 CGGAGAGATCGTGTAGTTCCA 58.985 52.381 0.00 0.00 0.00 3.53
283 287 2.015587 ACGGAGAGATCGTGTAGTTCC 58.984 52.381 0.00 0.00 39.55 3.62
284 288 2.937799 AGACGGAGAGATCGTGTAGTTC 59.062 50.000 0.00 0.00 41.22 3.01
285 289 2.678836 CAGACGGAGAGATCGTGTAGTT 59.321 50.000 0.00 0.00 41.22 2.24
286 290 2.281517 CAGACGGAGAGATCGTGTAGT 58.718 52.381 0.00 0.00 41.22 2.73
287 291 1.003331 GCAGACGGAGAGATCGTGTAG 60.003 57.143 0.00 0.00 41.22 2.74
288 292 1.015109 GCAGACGGAGAGATCGTGTA 58.985 55.000 0.00 0.00 41.22 2.90
289 293 0.678366 AGCAGACGGAGAGATCGTGT 60.678 55.000 0.00 0.00 41.22 4.49
290 294 0.248417 CAGCAGACGGAGAGATCGTG 60.248 60.000 0.00 0.00 41.22 4.35
291 295 1.999071 GCAGCAGACGGAGAGATCGT 61.999 60.000 0.00 0.00 44.03 3.73
292 296 1.299014 GCAGCAGACGGAGAGATCG 60.299 63.158 0.00 0.00 0.00 3.69
293 297 0.174389 TTGCAGCAGACGGAGAGATC 59.826 55.000 0.00 0.00 0.00 2.75
294 298 0.108424 GTTGCAGCAGACGGAGAGAT 60.108 55.000 0.00 0.00 0.00 2.75
295 299 1.290324 GTTGCAGCAGACGGAGAGA 59.710 57.895 0.00 0.00 0.00 3.10
296 300 1.739562 GGTTGCAGCAGACGGAGAG 60.740 63.158 2.05 0.00 0.00 3.20
297 301 2.343758 GGTTGCAGCAGACGGAGA 59.656 61.111 2.05 0.00 0.00 3.71
298 302 2.031012 TGGTTGCAGCAGACGGAG 59.969 61.111 2.05 0.00 0.00 4.63
299 303 2.280797 GTGGTTGCAGCAGACGGA 60.281 61.111 2.05 0.00 0.00 4.69
300 304 3.716006 CGTGGTTGCAGCAGACGG 61.716 66.667 14.09 0.05 0.00 4.79
301 305 1.568612 ATTCGTGGTTGCAGCAGACG 61.569 55.000 15.29 15.29 0.00 4.18
302 306 0.166814 GATTCGTGGTTGCAGCAGAC 59.833 55.000 2.05 0.00 0.00 3.51
303 307 0.250252 TGATTCGTGGTTGCAGCAGA 60.250 50.000 2.05 0.00 0.00 4.26
304 308 0.806868 ATGATTCGTGGTTGCAGCAG 59.193 50.000 2.05 0.00 0.00 4.24
305 309 0.522626 CATGATTCGTGGTTGCAGCA 59.477 50.000 2.05 0.00 0.00 4.41
306 310 0.523072 ACATGATTCGTGGTTGCAGC 59.477 50.000 10.52 0.00 0.00 5.25
307 311 1.201954 CGACATGATTCGTGGTTGCAG 60.202 52.381 10.52 0.00 34.16 4.41
308 312 0.795698 CGACATGATTCGTGGTTGCA 59.204 50.000 10.52 0.00 34.16 4.08
309 313 0.096976 CCGACATGATTCGTGGTTGC 59.903 55.000 10.52 0.00 37.29 4.17
310 314 0.096976 GCCGACATGATTCGTGGTTG 59.903 55.000 10.52 0.10 37.29 3.77
311 315 1.358725 CGCCGACATGATTCGTGGTT 61.359 55.000 10.52 0.00 37.29 3.67
312 316 1.809619 CGCCGACATGATTCGTGGT 60.810 57.895 10.52 0.00 37.29 4.16
313 317 2.525248 CCGCCGACATGATTCGTGG 61.525 63.158 10.52 0.00 37.29 4.94
314 318 3.005898 CCGCCGACATGATTCGTG 58.994 61.111 0.00 4.29 37.29 4.35
315 319 2.890474 GCCGCCGACATGATTCGT 60.890 61.111 0.00 0.00 37.29 3.85
316 320 3.988385 CGCCGCCGACATGATTCG 61.988 66.667 0.00 0.00 38.80 3.34
317 321 3.640000 CCGCCGCCGACATGATTC 61.640 66.667 0.00 0.00 36.29 2.52
328 332 4.241999 CATTGCAGTAGCCGCCGC 62.242 66.667 0.00 0.00 41.13 6.53
329 333 4.241999 GCATTGCAGTAGCCGCCG 62.242 66.667 3.15 0.00 41.13 6.46
330 334 3.133464 TGCATTGCAGTAGCCGCC 61.133 61.111 7.38 0.00 41.13 6.13
346 350 2.967397 CACCATGGGCAAGTGCTG 59.033 61.111 18.09 0.00 41.70 4.41
349 353 2.967397 CAGCACCATGGGCAAGTG 59.033 61.111 22.33 10.73 34.58 3.16
350 354 2.993264 GCAGCACCATGGGCAAGT 60.993 61.111 22.33 4.33 0.00 3.16
351 355 3.766691 GGCAGCACCATGGGCAAG 61.767 66.667 22.33 16.31 38.86 4.01
352 356 4.617556 TGGCAGCACCATGGGCAA 62.618 61.111 22.33 5.91 46.36 4.52
360 364 3.127533 GTCCACGATGGCAGCACC 61.128 66.667 2.73 0.00 37.47 5.01
361 365 3.127533 GGTCCACGATGGCAGCAC 61.128 66.667 2.73 0.00 37.47 4.40
362 366 4.408821 GGGTCCACGATGGCAGCA 62.409 66.667 2.73 0.00 37.47 4.41
363 367 4.101448 AGGGTCCACGATGGCAGC 62.101 66.667 0.00 0.00 37.47 5.25
364 368 2.187946 GAGGGTCCACGATGGCAG 59.812 66.667 0.00 0.00 37.47 4.85
365 369 3.770040 CGAGGGTCCACGATGGCA 61.770 66.667 0.58 0.00 37.47 4.92
367 371 4.530857 GGCGAGGGTCCACGATGG 62.531 72.222 10.81 0.00 39.43 3.51
368 372 3.461773 AGGCGAGGGTCCACGATG 61.462 66.667 10.81 0.00 32.00 3.84
369 373 3.461773 CAGGCGAGGGTCCACGAT 61.462 66.667 10.81 0.00 32.00 3.73
384 388 1.452651 ATTGTGGCATCCTCCGCAG 60.453 57.895 0.00 0.00 46.11 5.18
385 389 1.750018 CATTGTGGCATCCTCCGCA 60.750 57.895 0.00 0.00 44.18 5.69
386 390 3.113745 CATTGTGGCATCCTCCGC 58.886 61.111 0.00 0.00 37.15 5.54
387 391 1.750018 TGCATTGTGGCATCCTCCG 60.750 57.895 0.00 0.00 39.25 4.63
388 392 4.342427 TGCATTGTGGCATCCTCC 57.658 55.556 0.00 0.00 39.25 4.30
395 399 2.029649 AGACAAAGTGATGCATTGTGGC 60.030 45.455 7.33 0.00 38.88 5.01
396 400 3.928727 AGACAAAGTGATGCATTGTGG 57.071 42.857 7.33 0.00 38.88 4.17
397 401 5.106038 ACCATAGACAAAGTGATGCATTGTG 60.106 40.000 7.33 0.00 38.88 3.33
398 402 5.012239 ACCATAGACAAAGTGATGCATTGT 58.988 37.500 0.00 0.54 41.10 2.71
399 403 5.106038 ACACCATAGACAAAGTGATGCATTG 60.106 40.000 0.00 0.00 34.33 2.82
400 404 5.012239 ACACCATAGACAAAGTGATGCATT 58.988 37.500 0.00 0.00 34.33 3.56
401 405 4.592942 ACACCATAGACAAAGTGATGCAT 58.407 39.130 0.00 0.00 34.33 3.96
402 406 4.019792 ACACCATAGACAAAGTGATGCA 57.980 40.909 0.00 0.00 34.33 3.96
403 407 4.726416 CAACACCATAGACAAAGTGATGC 58.274 43.478 0.00 0.00 34.33 3.91
404 408 4.379813 GGCAACACCATAGACAAAGTGATG 60.380 45.833 0.00 0.00 38.86 3.07
405 409 3.758554 GGCAACACCATAGACAAAGTGAT 59.241 43.478 0.00 0.00 38.86 3.06
406 410 3.146066 GGCAACACCATAGACAAAGTGA 58.854 45.455 0.00 0.00 38.86 3.41
407 411 2.884012 TGGCAACACCATAGACAAAGTG 59.116 45.455 0.00 0.00 46.36 3.16
408 412 3.222173 TGGCAACACCATAGACAAAGT 57.778 42.857 0.00 0.00 46.36 2.66
422 426 0.734889 CGAAGATCCATGGTGGCAAC 59.265 55.000 12.58 0.00 37.47 4.17
423 427 1.031571 GCGAAGATCCATGGTGGCAA 61.032 55.000 12.58 0.00 37.47 4.52
424 428 1.451927 GCGAAGATCCATGGTGGCA 60.452 57.895 12.58 0.00 37.47 4.92
425 429 2.189499 GGCGAAGATCCATGGTGGC 61.189 63.158 12.58 5.02 37.47 5.01
426 430 1.889105 CGGCGAAGATCCATGGTGG 60.889 63.158 12.58 0.00 39.43 4.61
427 431 2.537560 GCGGCGAAGATCCATGGTG 61.538 63.158 12.98 0.00 0.00 4.17
428 432 2.203070 GCGGCGAAGATCCATGGT 60.203 61.111 12.98 0.00 0.00 3.55
429 433 3.341043 CGCGGCGAAGATCCATGG 61.341 66.667 19.16 4.97 0.00 3.66
430 434 2.279451 TCGCGGCGAAGATCCATG 60.279 61.111 24.33 0.00 31.06 3.66
431 435 2.279517 GTCGCGGCGAAGATCCAT 60.280 61.111 28.14 0.00 37.72 3.41
432 436 4.847516 CGTCGCGGCGAAGATCCA 62.848 66.667 32.09 2.78 37.53 3.41
443 447 4.505217 GTTGCAGCATCCGTCGCG 62.505 66.667 0.00 0.00 0.00 5.87
444 448 4.505217 CGTTGCAGCATCCGTCGC 62.505 66.667 0.00 0.00 0.00 5.19
445 449 1.742900 CTACGTTGCAGCATCCGTCG 61.743 60.000 20.28 12.75 34.95 5.12
446 450 0.457853 TCTACGTTGCAGCATCCGTC 60.458 55.000 20.28 0.00 34.95 4.79
447 451 0.175760 ATCTACGTTGCAGCATCCGT 59.824 50.000 20.45 20.45 37.33 4.69
448 452 1.290203 AATCTACGTTGCAGCATCCG 58.710 50.000 12.16 12.16 0.00 4.18
449 453 3.429085 CAAAATCTACGTTGCAGCATCC 58.571 45.455 0.00 0.00 0.00 3.51
457 461 2.478894 ACCACGAGCAAAATCTACGTTG 59.521 45.455 0.00 0.00 35.05 4.10
458 462 2.478894 CACCACGAGCAAAATCTACGTT 59.521 45.455 0.00 0.00 35.05 3.99
459 463 2.066262 CACCACGAGCAAAATCTACGT 58.934 47.619 0.00 0.00 37.68 3.57
460 464 1.201921 GCACCACGAGCAAAATCTACG 60.202 52.381 0.00 0.00 0.00 3.51
461 465 2.076863 AGCACCACGAGCAAAATCTAC 58.923 47.619 0.00 0.00 0.00 2.59
462 466 2.076100 CAGCACCACGAGCAAAATCTA 58.924 47.619 0.00 0.00 0.00 1.98
463 467 0.877071 CAGCACCACGAGCAAAATCT 59.123 50.000 0.00 0.00 0.00 2.40
464 468 0.730494 GCAGCACCACGAGCAAAATC 60.730 55.000 0.00 0.00 0.00 2.17
465 469 1.286880 GCAGCACCACGAGCAAAAT 59.713 52.632 0.00 0.00 0.00 1.82
466 470 1.661498 TTGCAGCACCACGAGCAAAA 61.661 50.000 0.00 0.00 43.24 2.44
467 471 2.117779 TTGCAGCACCACGAGCAAA 61.118 52.632 0.00 0.00 43.24 3.68
468 472 2.515757 TTGCAGCACCACGAGCAA 60.516 55.556 0.00 0.00 43.90 3.91
469 473 3.279116 GTTGCAGCACCACGAGCA 61.279 61.111 0.00 0.00 34.79 4.26
470 474 4.374702 CGTTGCAGCACCACGAGC 62.375 66.667 13.38 0.00 0.00 5.03
471 475 4.374702 GCGTTGCAGCACCACGAG 62.375 66.667 21.22 0.00 37.05 4.18
490 494 4.529219 TGTAGCATCCTGCCGCCG 62.529 66.667 0.00 0.00 46.52 6.46
491 495 1.526917 ATTGTAGCATCCTGCCGCC 60.527 57.895 0.00 0.00 46.52 6.13
492 496 1.650912 CATTGTAGCATCCTGCCGC 59.349 57.895 0.00 0.00 46.52 6.53
493 497 1.650912 GCATTGTAGCATCCTGCCG 59.349 57.895 0.00 0.00 46.52 5.69
494 498 1.650912 CGCATTGTAGCATCCTGCC 59.349 57.895 0.00 0.00 46.52 4.85
495 499 1.650912 CCGCATTGTAGCATCCTGC 59.349 57.895 0.00 0.00 45.46 4.85
496 500 1.650912 GCCGCATTGTAGCATCCTG 59.349 57.895 0.00 0.00 0.00 3.86
497 501 1.889105 CGCCGCATTGTAGCATCCT 60.889 57.895 0.00 0.00 0.00 3.24
498 502 2.633657 CGCCGCATTGTAGCATCC 59.366 61.111 0.00 0.00 0.00 3.51
499 503 2.051882 GCGCCGCATTGTAGCATC 60.052 61.111 3.15 0.00 0.00 3.91
500 504 2.514592 AGCGCCGCATTGTAGCAT 60.515 55.556 13.36 0.00 0.00 3.79
501 505 3.195002 GAGCGCCGCATTGTAGCA 61.195 61.111 13.36 0.00 0.00 3.49
502 506 4.285149 CGAGCGCCGCATTGTAGC 62.285 66.667 13.36 0.00 0.00 3.58
503 507 2.348140 GAACGAGCGCCGCATTGTAG 62.348 60.000 13.36 0.00 43.32 2.74
504 508 2.433491 AACGAGCGCCGCATTGTA 60.433 55.556 13.36 0.00 43.32 2.41
505 509 3.788766 GAACGAGCGCCGCATTGT 61.789 61.111 13.36 3.02 43.32 2.71
506 510 1.761244 TATGAACGAGCGCCGCATTG 61.761 55.000 13.36 2.26 43.32 2.82
507 511 1.087202 TTATGAACGAGCGCCGCATT 61.087 50.000 13.36 1.74 43.32 3.56
508 512 1.520564 TTATGAACGAGCGCCGCAT 60.521 52.632 13.36 14.40 43.32 4.73
509 513 2.125872 TTATGAACGAGCGCCGCA 60.126 55.556 13.36 9.03 43.32 5.69
510 514 2.320044 GTTATGAACGAGCGCCGC 59.680 61.111 16.48 0.00 43.32 6.53
511 515 1.807981 TGGTTATGAACGAGCGCCG 60.808 57.895 15.25 15.25 45.44 6.46
512 516 1.713830 GTGGTTATGAACGAGCGCC 59.286 57.895 2.29 0.00 0.00 6.53
513 517 1.074319 TCGTGGTTATGAACGAGCGC 61.074 55.000 0.00 0.00 43.40 5.92
514 518 3.024423 TCGTGGTTATGAACGAGCG 57.976 52.632 0.00 0.00 43.40 5.03
517 521 3.242641 CGAGATCTCGTGGTTATGAACGA 60.243 47.826 32.23 0.00 46.99 3.85
518 522 3.036633 CGAGATCTCGTGGTTATGAACG 58.963 50.000 32.23 7.06 46.99 3.95
531 535 2.279120 CAGTGCCGGCGAGATCTC 60.279 66.667 23.90 13.05 0.00 2.75
532 536 4.521062 GCAGTGCCGGCGAGATCT 62.521 66.667 23.90 11.74 0.00 2.75
533 537 4.819761 TGCAGTGCCGGCGAGATC 62.820 66.667 23.90 10.22 0.00 2.75
534 538 4.393155 TTGCAGTGCCGGCGAGAT 62.393 61.111 23.90 4.03 0.00 2.75
536 540 3.932580 TACTTGCAGTGCCGGCGAG 62.933 63.158 23.90 15.18 46.17 5.03
537 541 3.932580 CTACTTGCAGTGCCGGCGA 62.933 63.158 23.90 8.37 0.00 5.54
538 542 3.490759 CTACTTGCAGTGCCGGCG 61.491 66.667 23.90 8.96 0.00 6.46
539 543 3.127533 CCTACTTGCAGTGCCGGC 61.128 66.667 22.73 22.73 0.00 6.13
540 544 2.436646 CCCTACTTGCAGTGCCGG 60.437 66.667 13.72 7.77 0.00 6.13
541 545 2.436646 CCCCTACTTGCAGTGCCG 60.437 66.667 13.72 6.30 0.00 5.69
542 546 2.044946 CCCCCTACTTGCAGTGCC 60.045 66.667 13.72 0.00 0.00 5.01
543 547 2.751837 GCCCCCTACTTGCAGTGC 60.752 66.667 8.58 8.58 0.00 4.40
544 548 1.675641 GTGCCCCCTACTTGCAGTG 60.676 63.158 0.00 0.00 35.33 3.66
545 549 1.715019 TTGTGCCCCCTACTTGCAGT 61.715 55.000 0.00 0.00 35.33 4.40
546 550 1.074775 TTGTGCCCCCTACTTGCAG 59.925 57.895 0.00 0.00 35.33 4.41
547 551 1.228429 GTTGTGCCCCCTACTTGCA 60.228 57.895 0.00 0.00 0.00 4.08
548 552 1.074951 AGTTGTGCCCCCTACTTGC 59.925 57.895 0.00 0.00 0.00 4.01
549 553 0.609131 CCAGTTGTGCCCCCTACTTG 60.609 60.000 0.00 0.00 0.00 3.16
550 554 1.767692 CCAGTTGTGCCCCCTACTT 59.232 57.895 0.00 0.00 0.00 2.24
551 555 2.907179 GCCAGTTGTGCCCCCTACT 61.907 63.158 0.00 0.00 0.00 2.57
552 556 2.361230 GCCAGTTGTGCCCCCTAC 60.361 66.667 0.00 0.00 0.00 3.18
553 557 2.856494 TGCCAGTTGTGCCCCCTA 60.856 61.111 0.00 0.00 0.00 3.53
554 558 4.603535 GTGCCAGTTGTGCCCCCT 62.604 66.667 0.00 0.00 0.00 4.79
556 560 4.947147 TCGTGCCAGTTGTGCCCC 62.947 66.667 0.00 0.00 0.00 5.80
557 561 3.357079 CTCGTGCCAGTTGTGCCC 61.357 66.667 0.00 0.00 0.00 5.36
558 562 4.030452 GCTCGTGCCAGTTGTGCC 62.030 66.667 0.00 0.00 0.00 5.01
559 563 4.374702 CGCTCGTGCCAGTTGTGC 62.375 66.667 3.52 0.00 35.36 4.57
560 564 2.534019 AACGCTCGTGCCAGTTGTG 61.534 57.895 3.52 0.00 35.36 3.33
561 565 2.203015 AACGCTCGTGCCAGTTGT 60.203 55.556 3.52 0.00 35.36 3.32
562 566 2.249309 CAACGCTCGTGCCAGTTG 59.751 61.111 13.25 13.25 35.43 3.16
563 567 3.649986 GCAACGCTCGTGCCAGTT 61.650 61.111 3.52 0.45 35.36 3.16
564 568 4.908687 TGCAACGCTCGTGCCAGT 62.909 61.111 3.52 0.00 35.36 4.00
565 569 3.584250 CTTGCAACGCTCGTGCCAG 62.584 63.158 3.52 8.18 35.36 4.85
566 570 3.648982 CTTGCAACGCTCGTGCCA 61.649 61.111 3.52 0.00 35.36 4.92
567 571 4.389576 CCTTGCAACGCTCGTGCC 62.390 66.667 3.52 0.00 35.36 5.01
568 572 3.579626 GACCTTGCAACGCTCGTGC 62.580 63.158 0.00 0.00 0.00 5.34
569 573 2.551270 GACCTTGCAACGCTCGTG 59.449 61.111 0.00 0.00 0.00 4.35
570 574 3.036084 CGACCTTGCAACGCTCGT 61.036 61.111 0.00 0.00 0.00 4.18
571 575 3.777925 CCGACCTTGCAACGCTCG 61.778 66.667 0.00 1.76 0.00 5.03
572 576 2.665185 ACCGACCTTGCAACGCTC 60.665 61.111 0.00 0.00 0.00 5.03
573 577 2.665185 GACCGACCTTGCAACGCT 60.665 61.111 0.00 0.00 0.00 5.07
574 578 2.325082 ATGACCGACCTTGCAACGC 61.325 57.895 0.00 0.00 0.00 4.84
575 579 1.227999 ACATGACCGACCTTGCAACG 61.228 55.000 0.00 0.00 0.00 4.10
576 580 0.517316 GACATGACCGACCTTGCAAC 59.483 55.000 0.00 0.00 0.00 4.17
577 581 0.948623 CGACATGACCGACCTTGCAA 60.949 55.000 0.00 0.00 0.00 4.08
578 582 1.374125 CGACATGACCGACCTTGCA 60.374 57.895 0.00 0.00 0.00 4.08
579 583 1.352156 GACGACATGACCGACCTTGC 61.352 60.000 16.44 0.00 0.00 4.01
580 584 1.071019 CGACGACATGACCGACCTTG 61.071 60.000 16.44 0.00 0.00 3.61
581 585 1.211969 CGACGACATGACCGACCTT 59.788 57.895 16.44 0.00 0.00 3.50
582 586 1.673337 TCGACGACATGACCGACCT 60.673 57.895 16.44 0.00 0.00 3.85
583 587 1.513586 GTCGACGACATGACCGACC 60.514 63.158 22.66 8.47 43.71 4.79
584 588 4.053067 GTCGACGACATGACCGAC 57.947 61.111 22.66 13.17 43.28 4.79
585 589 1.232621 ACTGTCGACGACATGACCGA 61.233 55.000 29.29 6.46 41.94 4.69
586 590 0.386858 AACTGTCGACGACATGACCG 60.387 55.000 29.29 19.61 41.94 4.79
587 591 2.248487 GTAACTGTCGACGACATGACC 58.752 52.381 29.29 14.87 41.94 4.02
588 592 1.903139 CGTAACTGTCGACGACATGAC 59.097 52.381 29.29 23.36 41.94 3.06
589 593 1.799994 TCGTAACTGTCGACGACATGA 59.200 47.619 29.29 18.51 42.80 3.07
590 594 2.166799 CTCGTAACTGTCGACGACATG 58.833 52.381 29.29 23.43 42.80 3.21
591 595 1.129998 CCTCGTAACTGTCGACGACAT 59.870 52.381 29.29 18.74 42.80 3.06
592 596 0.514255 CCTCGTAACTGTCGACGACA 59.486 55.000 27.61 27.61 42.80 4.35
593 597 0.179205 CCCTCGTAACTGTCGACGAC 60.179 60.000 20.97 20.97 42.80 4.34
594 598 0.603707 ACCCTCGTAACTGTCGACGA 60.604 55.000 11.62 14.63 45.28 4.20
595 599 0.453950 CACCCTCGTAACTGTCGACG 60.454 60.000 11.62 8.41 40.43 5.12
596 600 0.877071 TCACCCTCGTAACTGTCGAC 59.123 55.000 9.11 9.11 33.71 4.20
597 601 0.877071 GTCACCCTCGTAACTGTCGA 59.123 55.000 0.00 0.00 35.96 4.20
598 602 0.453950 CGTCACCCTCGTAACTGTCG 60.454 60.000 0.00 0.00 0.00 4.35
599 603 0.731855 GCGTCACCCTCGTAACTGTC 60.732 60.000 0.00 0.00 0.00 3.51
600 604 1.177256 AGCGTCACCCTCGTAACTGT 61.177 55.000 0.00 0.00 0.00 3.55
601 605 0.732880 CAGCGTCACCCTCGTAACTG 60.733 60.000 0.00 0.00 0.00 3.16
602 606 0.892358 TCAGCGTCACCCTCGTAACT 60.892 55.000 0.00 0.00 0.00 2.24
603 607 0.456312 CTCAGCGTCACCCTCGTAAC 60.456 60.000 0.00 0.00 0.00 2.50
604 608 0.607217 TCTCAGCGTCACCCTCGTAA 60.607 55.000 0.00 0.00 0.00 3.18
605 609 0.393944 ATCTCAGCGTCACCCTCGTA 60.394 55.000 0.00 0.00 0.00 3.43
606 610 0.393944 TATCTCAGCGTCACCCTCGT 60.394 55.000 0.00 0.00 0.00 4.18
607 611 0.955178 ATATCTCAGCGTCACCCTCG 59.045 55.000 0.00 0.00 0.00 4.63
608 612 2.885266 TGTATATCTCAGCGTCACCCTC 59.115 50.000 0.00 0.00 0.00 4.30
609 613 2.945456 TGTATATCTCAGCGTCACCCT 58.055 47.619 0.00 0.00 0.00 4.34
610 614 3.579709 CATGTATATCTCAGCGTCACCC 58.420 50.000 0.00 0.00 0.00 4.61
611 615 2.989840 GCATGTATATCTCAGCGTCACC 59.010 50.000 0.00 0.00 0.00 4.02
612 616 3.642705 TGCATGTATATCTCAGCGTCAC 58.357 45.455 0.00 0.00 0.00 3.67
613 617 4.051237 GTTGCATGTATATCTCAGCGTCA 58.949 43.478 0.00 0.00 0.00 4.35
614 618 4.051237 TGTTGCATGTATATCTCAGCGTC 58.949 43.478 0.00 0.00 0.00 5.19
615 619 3.804325 GTGTTGCATGTATATCTCAGCGT 59.196 43.478 0.00 0.00 0.00 5.07
616 620 3.185188 GGTGTTGCATGTATATCTCAGCG 59.815 47.826 0.00 0.00 0.00 5.18
617 621 3.185188 CGGTGTTGCATGTATATCTCAGC 59.815 47.826 0.00 0.00 0.00 4.26
618 622 4.371786 ACGGTGTTGCATGTATATCTCAG 58.628 43.478 0.00 0.00 0.00 3.35
619 623 4.142049 TGACGGTGTTGCATGTATATCTCA 60.142 41.667 0.00 0.00 0.00 3.27
620 624 4.368315 TGACGGTGTTGCATGTATATCTC 58.632 43.478 0.00 0.00 0.00 2.75
621 625 4.400529 TGACGGTGTTGCATGTATATCT 57.599 40.909 0.00 0.00 0.00 1.98
622 626 4.143326 CGATGACGGTGTTGCATGTATATC 60.143 45.833 0.00 0.00 35.72 1.63
623 627 3.740832 CGATGACGGTGTTGCATGTATAT 59.259 43.478 0.00 0.00 35.72 0.86
624 628 3.120041 CGATGACGGTGTTGCATGTATA 58.880 45.455 0.00 0.00 35.72 1.47
625 629 1.933181 CGATGACGGTGTTGCATGTAT 59.067 47.619 0.00 0.00 35.72 2.29
626 630 1.355005 CGATGACGGTGTTGCATGTA 58.645 50.000 0.00 0.00 35.72 2.29
627 631 2.161831 CGATGACGGTGTTGCATGT 58.838 52.632 0.00 0.00 35.72 3.21
657 661 4.410400 CTGCCGTCTTCCCCCACC 62.410 72.222 0.00 0.00 0.00 4.61
658 662 3.192103 AACTGCCGTCTTCCCCCAC 62.192 63.158 0.00 0.00 0.00 4.61
659 663 2.852075 AACTGCCGTCTTCCCCCA 60.852 61.111 0.00 0.00 0.00 4.96
660 664 2.359975 CAACTGCCGTCTTCCCCC 60.360 66.667 0.00 0.00 0.00 5.40
661 665 1.671379 GACAACTGCCGTCTTCCCC 60.671 63.158 0.00 0.00 0.00 4.81
662 666 2.027625 CGACAACTGCCGTCTTCCC 61.028 63.158 0.00 0.00 0.00 3.97
663 667 1.300697 ACGACAACTGCCGTCTTCC 60.301 57.895 0.00 0.00 33.23 3.46
664 668 4.338327 ACGACAACTGCCGTCTTC 57.662 55.556 0.00 0.00 33.23 2.87
668 672 3.858868 ATGCGACGACAACTGCCGT 62.859 57.895 0.00 0.00 42.17 5.68
669 673 3.112075 ATGCGACGACAACTGCCG 61.112 61.111 0.00 0.00 0.00 5.69
670 674 2.476051 CATGCGACGACAACTGCC 59.524 61.111 0.00 0.00 0.00 4.85
671 675 2.476051 CCATGCGACGACAACTGC 59.524 61.111 0.00 0.00 0.00 4.40
672 676 2.476051 GCCATGCGACGACAACTG 59.524 61.111 0.00 0.00 0.00 3.16
673 677 2.742372 GGCCATGCGACGACAACT 60.742 61.111 0.00 0.00 0.00 3.16
674 678 3.047280 TGGCCATGCGACGACAAC 61.047 61.111 0.00 0.00 0.00 3.32
675 679 3.047280 GTGGCCATGCGACGACAA 61.047 61.111 9.72 0.00 0.00 3.18
678 682 4.758251 CTGGTGGCCATGCGACGA 62.758 66.667 9.72 0.00 38.13 4.20
680 684 2.672996 AACTGGTGGCCATGCGAC 60.673 61.111 9.72 0.00 36.56 5.19
681 685 2.672651 CAACTGGTGGCCATGCGA 60.673 61.111 9.72 0.00 30.82 5.10
682 686 4.424566 GCAACTGGTGGCCATGCG 62.425 66.667 9.72 2.14 31.28 4.73
689 693 1.600636 ACATGACGGCAACTGGTGG 60.601 57.895 0.00 0.00 0.00 4.61
690 694 1.575922 CACATGACGGCAACTGGTG 59.424 57.895 0.00 0.00 0.00 4.17
691 695 1.600636 CCACATGACGGCAACTGGT 60.601 57.895 9.07 0.00 0.00 4.00
692 696 3.266964 CCACATGACGGCAACTGG 58.733 61.111 0.00 0.00 0.00 4.00
700 704 3.792047 CACGCCAGCCACATGACG 61.792 66.667 0.00 0.00 0.00 4.35
701 705 3.434319 CCACGCCAGCCACATGAC 61.434 66.667 0.00 0.00 0.00 3.06
710 714 3.057548 TTCATGCAGCCACGCCAG 61.058 61.111 0.00 0.00 0.00 4.85
711 715 3.364441 GTTCATGCAGCCACGCCA 61.364 61.111 0.00 0.00 0.00 5.69
712 716 4.465512 CGTTCATGCAGCCACGCC 62.466 66.667 0.00 0.00 0.00 5.68
713 717 4.465512 CCGTTCATGCAGCCACGC 62.466 66.667 8.44 0.00 0.00 5.34
714 718 2.108514 ATCCGTTCATGCAGCCACG 61.109 57.895 7.23 7.23 0.00 4.94
715 719 1.430632 CATCCGTTCATGCAGCCAC 59.569 57.895 0.00 0.00 0.00 5.01
716 720 1.750018 CCATCCGTTCATGCAGCCA 60.750 57.895 0.00 0.00 0.00 4.75
717 721 1.031571 TTCCATCCGTTCATGCAGCC 61.032 55.000 0.00 0.00 0.00 4.85
718 722 0.379669 CTTCCATCCGTTCATGCAGC 59.620 55.000 0.00 0.00 0.00 5.25
719 723 2.028420 TCTTCCATCCGTTCATGCAG 57.972 50.000 0.00 0.00 0.00 4.41
720 724 2.358957 CTTCTTCCATCCGTTCATGCA 58.641 47.619 0.00 0.00 0.00 3.96
721 725 1.672881 CCTTCTTCCATCCGTTCATGC 59.327 52.381 0.00 0.00 0.00 4.06
722 726 2.292267 CCCTTCTTCCATCCGTTCATG 58.708 52.381 0.00 0.00 0.00 3.07
723 727 1.212935 CCCCTTCTTCCATCCGTTCAT 59.787 52.381 0.00 0.00 0.00 2.57
724 728 0.618458 CCCCTTCTTCCATCCGTTCA 59.382 55.000 0.00 0.00 0.00 3.18
725 729 0.909623 TCCCCTTCTTCCATCCGTTC 59.090 55.000 0.00 0.00 0.00 3.95
726 730 0.912486 CTCCCCTTCTTCCATCCGTT 59.088 55.000 0.00 0.00 0.00 4.44
727 731 0.252742 ACTCCCCTTCTTCCATCCGT 60.253 55.000 0.00 0.00 0.00 4.69
728 732 0.179000 CACTCCCCTTCTTCCATCCG 59.821 60.000 0.00 0.00 0.00 4.18
729 733 1.584724 TCACTCCCCTTCTTCCATCC 58.415 55.000 0.00 0.00 0.00 3.51
730 734 2.747799 GCATCACTCCCCTTCTTCCATC 60.748 54.545 0.00 0.00 0.00 3.51
731 735 1.213926 GCATCACTCCCCTTCTTCCAT 59.786 52.381 0.00 0.00 0.00 3.41
732 736 0.620556 GCATCACTCCCCTTCTTCCA 59.379 55.000 0.00 0.00 0.00 3.53
733 737 0.620556 TGCATCACTCCCCTTCTTCC 59.379 55.000 0.00 0.00 0.00 3.46
734 738 2.016096 GCTGCATCACTCCCCTTCTTC 61.016 57.143 0.00 0.00 0.00 2.87
735 739 0.034670 GCTGCATCACTCCCCTTCTT 60.035 55.000 0.00 0.00 0.00 2.52
736 740 0.913451 AGCTGCATCACTCCCCTTCT 60.913 55.000 1.02 0.00 0.00 2.85
737 741 0.747283 CAGCTGCATCACTCCCCTTC 60.747 60.000 0.00 0.00 0.00 3.46
738 742 1.302285 CAGCTGCATCACTCCCCTT 59.698 57.895 0.00 0.00 0.00 3.95
739 743 1.908340 GACAGCTGCATCACTCCCCT 61.908 60.000 15.27 0.00 0.00 4.79
740 744 1.451028 GACAGCTGCATCACTCCCC 60.451 63.158 15.27 0.00 0.00 4.81
741 745 0.321919 TTGACAGCTGCATCACTCCC 60.322 55.000 15.27 0.00 0.00 4.30
742 746 0.801251 GTTGACAGCTGCATCACTCC 59.199 55.000 15.27 0.00 0.00 3.85
743 747 0.441533 CGTTGACAGCTGCATCACTC 59.558 55.000 15.27 2.90 0.00 3.51
744 748 0.033920 TCGTTGACAGCTGCATCACT 59.966 50.000 15.27 0.00 0.00 3.41
745 749 0.441533 CTCGTTGACAGCTGCATCAC 59.558 55.000 15.27 8.07 0.00 3.06
746 750 1.293963 GCTCGTTGACAGCTGCATCA 61.294 55.000 15.27 8.43 33.75 3.07
747 751 1.423056 GCTCGTTGACAGCTGCATC 59.577 57.895 15.27 5.39 33.75 3.91
748 752 2.385875 CGCTCGTTGACAGCTGCAT 61.386 57.895 15.27 0.00 34.45 3.96
749 753 2.969677 TTCGCTCGTTGACAGCTGCA 62.970 55.000 15.27 10.30 34.45 4.41
750 754 2.310233 TTCGCTCGTTGACAGCTGC 61.310 57.895 15.27 7.45 34.45 5.25
751 755 1.488957 GTTCGCTCGTTGACAGCTG 59.511 57.895 13.48 13.48 34.45 4.24
752 756 1.664965 GGTTCGCTCGTTGACAGCT 60.665 57.895 0.00 0.00 34.45 4.24
753 757 1.291877 ATGGTTCGCTCGTTGACAGC 61.292 55.000 0.00 0.00 0.00 4.40
754 758 0.439985 CATGGTTCGCTCGTTGACAG 59.560 55.000 0.00 0.00 0.00 3.51
755 759 0.948623 CCATGGTTCGCTCGTTGACA 60.949 55.000 2.57 0.00 0.00 3.58
756 760 0.669318 TCCATGGTTCGCTCGTTGAC 60.669 55.000 12.58 0.00 0.00 3.18
757 761 0.034198 TTCCATGGTTCGCTCGTTGA 59.966 50.000 12.58 0.00 0.00 3.18
758 762 0.443869 CTTCCATGGTTCGCTCGTTG 59.556 55.000 12.58 0.00 0.00 4.10
759 763 0.673644 CCTTCCATGGTTCGCTCGTT 60.674 55.000 12.58 0.00 0.00 3.85
760 764 1.079127 CCTTCCATGGTTCGCTCGT 60.079 57.895 12.58 0.00 0.00 4.18
761 765 1.815421 CCCTTCCATGGTTCGCTCG 60.815 63.158 12.58 0.00 0.00 5.03
762 766 1.452108 CCCCTTCCATGGTTCGCTC 60.452 63.158 12.58 0.00 0.00 5.03
763 767 2.677228 CCCCTTCCATGGTTCGCT 59.323 61.111 12.58 0.00 0.00 4.93
764 768 2.440247 CCCCCTTCCATGGTTCGC 60.440 66.667 12.58 0.00 0.00 4.70
765 769 1.378514 CACCCCCTTCCATGGTTCG 60.379 63.158 12.58 1.12 0.00 3.95
766 770 1.682344 GCACCCCCTTCCATGGTTC 60.682 63.158 12.58 0.00 0.00 3.62
767 771 2.169810 AGCACCCCCTTCCATGGTT 61.170 57.895 12.58 0.00 0.00 3.67
768 772 2.535317 AGCACCCCCTTCCATGGT 60.535 61.111 12.58 0.00 0.00 3.55
769 773 2.043652 CAGCACCCCCTTCCATGG 60.044 66.667 4.97 4.97 0.00 3.66
770 774 2.757099 GCAGCACCCCCTTCCATG 60.757 66.667 0.00 0.00 0.00 3.66
771 775 4.431131 CGCAGCACCCCCTTCCAT 62.431 66.667 0.00 0.00 0.00 3.41
781 785 4.778143 CCCTACCCCACGCAGCAC 62.778 72.222 0.00 0.00 0.00 4.40
803 807 1.978580 AGATTGACCCAGTTCGTCCTT 59.021 47.619 0.00 0.00 0.00 3.36
816 820 4.751600 TCGCATCATCCAACATAGATTGAC 59.248 41.667 0.00 0.00 0.00 3.18
840 844 1.022735 GTCTTGCCGTCCGATCTAGA 58.977 55.000 0.00 0.00 0.00 2.43
843 847 1.513158 CTGTCTTGCCGTCCGATCT 59.487 57.895 0.00 0.00 0.00 2.75
844 848 2.167861 GCTGTCTTGCCGTCCGATC 61.168 63.158 0.00 0.00 0.00 3.69
1060 1066 0.390472 CGGTGAGGTGAGAAGAAGGC 60.390 60.000 0.00 0.00 0.00 4.35
1233 1245 4.691326 AGAGTATAAACAAGCTAGGGCC 57.309 45.455 0.00 0.00 39.73 5.80
1473 1485 3.583966 TCCCACGGTAGTAATTTCAAGGT 59.416 43.478 0.00 0.00 0.00 3.50
1519 1531 6.926272 AGTAGAGTACAGCAGAAAAGAACAAG 59.074 38.462 0.00 0.00 0.00 3.16
1607 1619 1.102978 AGGCCGAAACCACAATATGC 58.897 50.000 0.00 0.00 0.00 3.14
1666 1678 6.515043 TTTTCTAACAGAGGTACGAAAACG 57.485 37.500 0.00 0.00 33.81 3.60
1711 1723 6.312426 GCCATGTGATCACAGATTATAGCTAC 59.688 42.308 30.63 8.37 45.48 3.58
1753 1765 6.588204 ACAGATTGCCCGATTTACTTATACA 58.412 36.000 0.00 0.00 0.00 2.29
1772 1784 5.528690 GTGGATGCACAATGTGTATACAGAT 59.471 40.000 25.95 9.62 46.78 2.90
2071 2103 3.003480 AGCAGTCTTGGCGAAATACTTC 58.997 45.455 0.00 0.00 36.08 3.01
2074 2106 1.398390 CCAGCAGTCTTGGCGAAATAC 59.602 52.381 0.00 0.00 36.08 1.89
2213 2247 6.616260 GCTTTATCGCCTTGAAAACATTGTTG 60.616 38.462 2.13 0.00 0.00 3.33
2225 2259 0.726827 TTGCTCGCTTTATCGCCTTG 59.273 50.000 0.00 0.00 0.00 3.61
2248 2283 0.251209 AGGTGAGTCGGTGCTACAGA 60.251 55.000 0.00 0.00 0.00 3.41
2439 2475 2.613133 GCTCAAGTTCAGAGGCATCATC 59.387 50.000 0.00 0.00 33.72 2.92
2465 2501 2.043115 AGCGATGTATAGATGAGGGGGA 59.957 50.000 0.00 0.00 0.00 4.81
2601 2637 0.617413 CCATGCTGGAGTGAGAAGGT 59.383 55.000 0.00 0.00 40.96 3.50
2655 2691 1.767759 AATATGTGTTCTGGCCAGCC 58.232 50.000 28.91 20.28 0.00 4.85
2695 2731 8.811994 GTCTAATGATCCTAGGAGAAAAGCTAT 58.188 37.037 18.34 0.00 0.00 2.97
2731 2767 0.038166 CACCTGCCACCTGGTAATGT 59.962 55.000 0.00 0.00 40.86 2.71
2753 2789 0.033228 GTCCCTGCTCTGATGGATCG 59.967 60.000 0.00 0.00 0.00 3.69
2803 2839 1.276421 CTCCTCCACATCTTTGACGGT 59.724 52.381 0.00 0.00 0.00 4.83
2853 2889 3.867984 GCTCTTTTTCTCCTCCACCTCTG 60.868 52.174 0.00 0.00 0.00 3.35
2912 2948 1.604147 CCTTGTTTTCATCCCCGCCC 61.604 60.000 0.00 0.00 0.00 6.13
2915 2951 1.463674 CTCCCTTGTTTTCATCCCCG 58.536 55.000 0.00 0.00 0.00 5.73
2923 2959 2.117423 CCCGCCCTCCCTTGTTTT 59.883 61.111 0.00 0.00 0.00 2.43
2930 2966 4.798682 TCTTCTCCCCGCCCTCCC 62.799 72.222 0.00 0.00 0.00 4.30
2959 2995 1.977129 AGCAAGATATGGCTCCTCTCC 59.023 52.381 0.00 0.00 34.76 3.71
2960 2996 2.871236 GCAGCAAGATATGGCTCCTCTC 60.871 54.545 0.00 0.00 38.56 3.20
2962 2998 1.072015 AGCAGCAAGATATGGCTCCTC 59.928 52.381 0.00 0.00 38.56 3.71
2963 2999 1.138568 AGCAGCAAGATATGGCTCCT 58.861 50.000 0.00 0.00 38.56 3.69
2964 3000 1.236628 CAGCAGCAAGATATGGCTCC 58.763 55.000 0.00 0.00 38.56 4.70
2973 3009 4.355720 CCCCCAGCAGCAGCAAGA 62.356 66.667 3.17 0.00 45.49 3.02
3001 3037 3.790437 CCATCCTCTGGCGCAGGT 61.790 66.667 10.83 0.00 38.47 4.00
3018 3054 2.140839 TCTCTCCGGTTTCTACTCCC 57.859 55.000 0.00 0.00 0.00 4.30
3019 3055 3.676598 GCTTTCTCTCCGGTTTCTACTCC 60.677 52.174 0.00 0.00 0.00 3.85
3037 3073 2.564471 GCACAGATCTGCCAGCTTT 58.436 52.632 22.83 0.00 0.00 3.51
3130 3184 0.753848 CGTCCTCTCTCTCTTCCCCC 60.754 65.000 0.00 0.00 0.00 5.40
3151 3205 3.123620 CGCAGCAAGGTCTGGCTC 61.124 66.667 0.00 0.00 38.56 4.70
3164 3218 4.834453 CCTCTCCCAGCAGCGCAG 62.834 72.222 11.47 1.31 0.00 5.18
3168 3222 4.486503 CAGCCCTCTCCCAGCAGC 62.487 72.222 0.00 0.00 0.00 5.25
3169 3223 4.486503 GCAGCCCTCTCCCAGCAG 62.487 72.222 0.00 0.00 0.00 4.24
3189 3243 3.151022 GTCTCGGCTCCCCCTCTG 61.151 72.222 0.00 0.00 0.00 3.35
3190 3244 4.467107 GGTCTCGGCTCCCCCTCT 62.467 72.222 0.00 0.00 0.00 3.69
3226 3280 2.601666 TCCACGGCTCAGCTCTGT 60.602 61.111 0.00 0.00 0.00 3.41
3238 3292 1.068417 TGGAGAACCAACGTCCACG 59.932 57.895 0.00 0.00 43.91 4.94
3299 3353 1.427072 AACCAGGCTACCCAAGTGCT 61.427 55.000 0.00 0.00 0.00 4.40
3303 3357 1.995376 AACAAACCAGGCTACCCAAG 58.005 50.000 0.00 0.00 0.00 3.61
3312 3366 2.628178 GGAAAGAGGGAAACAAACCAGG 59.372 50.000 0.00 0.00 0.00 4.45
3316 3370 2.891580 GAGGGGAAAGAGGGAAACAAAC 59.108 50.000 0.00 0.00 0.00 2.93
3361 3415 1.303643 GGGAACAAGGGCAGGACTG 60.304 63.158 0.00 0.00 0.00 3.51
3362 3416 1.464198 AGGGAACAAGGGCAGGACT 60.464 57.895 0.00 0.00 0.00 3.85
3363 3417 1.002011 GAGGGAACAAGGGCAGGAC 60.002 63.158 0.00 0.00 0.00 3.85
3364 3418 2.592993 CGAGGGAACAAGGGCAGGA 61.593 63.158 0.00 0.00 0.00 3.86
3365 3419 2.045926 CGAGGGAACAAGGGCAGG 60.046 66.667 0.00 0.00 0.00 4.85
3366 3420 2.045926 CCGAGGGAACAAGGGCAG 60.046 66.667 0.00 0.00 0.00 4.85
3367 3421 3.646715 CCCGAGGGAACAAGGGCA 61.647 66.667 0.84 0.00 41.37 5.36
3368 3422 3.327404 TCCCGAGGGAACAAGGGC 61.327 66.667 8.71 0.00 45.57 5.19
3423 3477 0.396060 GCAACCTTGGGCCAAATCAA 59.604 50.000 21.28 0.00 0.00 2.57
3660 3714 3.675698 GTCTCTAGAACCAGAAAACAGCG 59.324 47.826 0.00 0.00 0.00 5.18
3904 3958 6.348498 CACCCTATATCAACAACATGAGACA 58.652 40.000 0.00 0.00 31.76 3.41
4052 4106 7.524717 ACAATCTAGTGCTACAAACCAAAAT 57.475 32.000 0.00 0.00 0.00 1.82
4248 4302 4.454847 GGAAAAAGGTAGAGGCACAAGTAC 59.545 45.833 0.00 0.00 0.00 2.73
4356 4411 8.642908 AGCAATACAAACAAGAAACTTTTACC 57.357 30.769 0.00 0.00 0.00 2.85
4368 4424 7.093988 ACCTTGTATGCATAGCAATACAAACAA 60.094 33.333 6.67 5.48 43.62 2.83
4834 4894 7.581213 TCTTCTTAAAATTGAGCAAACAGGA 57.419 32.000 0.00 0.00 0.00 3.86
4912 4972 3.509575 GGACATGTTTCCATTGCCTTACA 59.490 43.478 0.00 0.00 35.49 2.41
4913 4973 3.763897 AGGACATGTTTCCATTGCCTTAC 59.236 43.478 0.00 0.00 38.25 2.34
5015 5077 1.597854 CCGGCTGCTCTTGTGAACA 60.598 57.895 0.00 0.00 0.00 3.18
5338 5559 5.882557 ACATGGCCATTTCAGTTAGTCTAAG 59.117 40.000 17.92 0.80 0.00 2.18
5439 5660 9.836076 AAATTGCGTTAGAACTTCCTAAATTAC 57.164 29.630 0.00 0.00 31.19 1.89
5472 5693 7.275920 ACCATAGTGTCTCTTCAACATTATCC 58.724 38.462 0.00 0.00 30.00 2.59
5491 5712 4.322349 GGTCCTCTGCTAGCAATACCATAG 60.322 50.000 19.86 4.36 0.00 2.23
5675 5896 7.218314 ACCCTTCATCTCCATTAAGAAGATT 57.782 36.000 0.00 0.00 38.30 2.40
5677 5898 6.012508 ACAACCCTTCATCTCCATTAAGAAGA 60.013 38.462 0.00 0.00 38.30 2.87
5678 5899 6.094603 CACAACCCTTCATCTCCATTAAGAAG 59.905 42.308 0.00 0.00 36.38 2.85
5679 5900 5.945784 CACAACCCTTCATCTCCATTAAGAA 59.054 40.000 0.00 0.00 0.00 2.52
5813 6034 5.511234 AGAGCATGAATCCAATAAGCAAC 57.489 39.130 0.00 0.00 0.00 4.17
5837 6058 4.221703 TGCCCTTCACTCTGAAAACAAAAA 59.778 37.500 0.00 0.00 35.73 1.94
5842 6063 2.160417 CGATGCCCTTCACTCTGAAAAC 59.840 50.000 0.00 0.00 35.73 2.43
6025 6246 6.372659 GTCAGATGTATGTGGACATTGACTTT 59.627 38.462 11.67 0.00 40.18 2.66
6106 6330 2.719531 TACTTTCCCAGCACACACAA 57.280 45.000 0.00 0.00 0.00 3.33
6238 7026 2.441375 TCATCTCCACAGTCCAACCAAA 59.559 45.455 0.00 0.00 0.00 3.28
6239 7027 2.054021 TCATCTCCACAGTCCAACCAA 58.946 47.619 0.00 0.00 0.00 3.67
6240 7028 1.728323 TCATCTCCACAGTCCAACCA 58.272 50.000 0.00 0.00 0.00 3.67
6241 7029 2.616510 CCTTCATCTCCACAGTCCAACC 60.617 54.545 0.00 0.00 0.00 3.77
6242 7030 2.616510 CCCTTCATCTCCACAGTCCAAC 60.617 54.545 0.00 0.00 0.00 3.77
6243 7031 1.630369 CCCTTCATCTCCACAGTCCAA 59.370 52.381 0.00 0.00 0.00 3.53
6244 7032 1.203300 TCCCTTCATCTCCACAGTCCA 60.203 52.381 0.00 0.00 0.00 4.02
6245 7033 1.484240 CTCCCTTCATCTCCACAGTCC 59.516 57.143 0.00 0.00 0.00 3.85
6246 7034 2.183679 ACTCCCTTCATCTCCACAGTC 58.816 52.381 0.00 0.00 0.00 3.51
6247 7035 2.334006 ACTCCCTTCATCTCCACAGT 57.666 50.000 0.00 0.00 0.00 3.55
6248 7036 3.099905 TGTACTCCCTTCATCTCCACAG 58.900 50.000 0.00 0.00 0.00 3.66
6249 7037 3.184382 TGTACTCCCTTCATCTCCACA 57.816 47.619 0.00 0.00 0.00 4.17
6250 7038 4.080863 ACATTGTACTCCCTTCATCTCCAC 60.081 45.833 0.00 0.00 0.00 4.02
6251 7039 4.104086 ACATTGTACTCCCTTCATCTCCA 58.896 43.478 0.00 0.00 0.00 3.86
6252 7040 4.762289 ACATTGTACTCCCTTCATCTCC 57.238 45.455 0.00 0.00 0.00 3.71
6253 7041 5.734720 TGAACATTGTACTCCCTTCATCTC 58.265 41.667 0.00 0.00 0.00 2.75
6254 7042 5.762179 TGAACATTGTACTCCCTTCATCT 57.238 39.130 0.00 0.00 0.00 2.90
6255 7043 6.655003 TCTTTGAACATTGTACTCCCTTCATC 59.345 38.462 0.00 0.00 0.00 2.92
6256 7044 6.542821 TCTTTGAACATTGTACTCCCTTCAT 58.457 36.000 0.00 0.00 0.00 2.57
6257 7045 5.935945 TCTTTGAACATTGTACTCCCTTCA 58.064 37.500 0.00 0.00 0.00 3.02
6258 7046 6.877611 TTCTTTGAACATTGTACTCCCTTC 57.122 37.500 0.00 0.00 0.00 3.46
6259 7047 6.294731 GCATTCTTTGAACATTGTACTCCCTT 60.295 38.462 0.00 0.00 0.00 3.95
6260 7048 5.183904 GCATTCTTTGAACATTGTACTCCCT 59.816 40.000 0.00 0.00 0.00 4.20
6261 7049 5.048083 TGCATTCTTTGAACATTGTACTCCC 60.048 40.000 0.00 0.00 0.00 4.30
6262 7050 5.858581 GTGCATTCTTTGAACATTGTACTCC 59.141 40.000 0.00 0.00 33.56 3.85
6263 7051 6.437928 TGTGCATTCTTTGAACATTGTACTC 58.562 36.000 0.00 0.00 39.09 2.59
6264 7052 6.389830 TGTGCATTCTTTGAACATTGTACT 57.610 33.333 0.00 0.00 39.09 2.73
6265 7053 7.222611 ACTTTGTGCATTCTTTGAACATTGTAC 59.777 33.333 0.00 0.00 43.67 2.90
6266 7054 7.264221 ACTTTGTGCATTCTTTGAACATTGTA 58.736 30.769 0.00 0.00 43.67 2.41
6267 7055 6.108015 ACTTTGTGCATTCTTTGAACATTGT 58.892 32.000 0.00 0.00 43.67 2.71
6268 7056 6.592798 ACTTTGTGCATTCTTTGAACATTG 57.407 33.333 0.00 0.00 43.67 2.82
6269 7057 6.817641 TGAACTTTGTGCATTCTTTGAACATT 59.182 30.769 0.00 0.00 43.67 2.71
6270 7058 6.339730 TGAACTTTGTGCATTCTTTGAACAT 58.660 32.000 0.00 0.00 43.67 2.71
6271 7059 5.718146 TGAACTTTGTGCATTCTTTGAACA 58.282 33.333 0.00 0.00 42.48 3.18
6272 7060 6.698766 AGATGAACTTTGTGCATTCTTTGAAC 59.301 34.615 0.00 0.00 30.94 3.18
6273 7061 6.698329 CAGATGAACTTTGTGCATTCTTTGAA 59.302 34.615 0.00 0.00 30.94 2.69
6274 7062 6.210796 CAGATGAACTTTGTGCATTCTTTGA 58.789 36.000 0.00 0.00 30.94 2.69
6275 7063 5.404366 CCAGATGAACTTTGTGCATTCTTTG 59.596 40.000 0.00 0.00 30.94 2.77
6276 7064 5.535333 CCAGATGAACTTTGTGCATTCTTT 58.465 37.500 0.00 0.00 30.94 2.52
6277 7065 4.560108 GCCAGATGAACTTTGTGCATTCTT 60.560 41.667 0.00 0.00 30.94 2.52
6278 7066 3.057033 GCCAGATGAACTTTGTGCATTCT 60.057 43.478 0.00 0.00 30.94 2.40
6279 7067 3.248266 GCCAGATGAACTTTGTGCATTC 58.752 45.455 0.00 0.00 30.94 2.67
6280 7068 2.028748 GGCCAGATGAACTTTGTGCATT 60.029 45.455 0.00 0.00 30.94 3.56
6281 7069 1.547372 GGCCAGATGAACTTTGTGCAT 59.453 47.619 0.00 0.00 33.96 3.96
6282 7070 0.961019 GGCCAGATGAACTTTGTGCA 59.039 50.000 0.00 0.00 0.00 4.57
6283 7071 0.961019 TGGCCAGATGAACTTTGTGC 59.039 50.000 0.00 0.00 0.00 4.57
6284 7072 1.068055 GCTGGCCAGATGAACTTTGTG 60.068 52.381 37.21 6.14 0.00 3.33
6285 7073 1.251251 GCTGGCCAGATGAACTTTGT 58.749 50.000 37.21 0.00 0.00 2.83
6286 7074 1.068055 GTGCTGGCCAGATGAACTTTG 60.068 52.381 37.21 6.97 0.00 2.77
6287 7075 1.251251 GTGCTGGCCAGATGAACTTT 58.749 50.000 37.21 0.00 0.00 2.66
6288 7076 0.111061 TGTGCTGGCCAGATGAACTT 59.889 50.000 37.21 0.00 0.00 2.66
6289 7077 0.330604 ATGTGCTGGCCAGATGAACT 59.669 50.000 37.21 11.85 0.00 3.01
6290 7078 1.672881 GTATGTGCTGGCCAGATGAAC 59.327 52.381 37.21 25.20 0.00 3.18
6291 7079 1.408683 GGTATGTGCTGGCCAGATGAA 60.409 52.381 37.21 17.95 0.00 2.57
6292 7080 0.181114 GGTATGTGCTGGCCAGATGA 59.819 55.000 37.21 18.25 0.00 2.92
6293 7081 0.107066 TGGTATGTGCTGGCCAGATG 60.107 55.000 37.21 12.08 0.00 2.90
6294 7082 0.107017 GTGGTATGTGCTGGCCAGAT 60.107 55.000 37.21 22.59 0.00 2.90
6324 7120 9.689976 TGCCATGCATAATTAATAATAACACAC 57.310 29.630 0.00 0.00 31.71 3.82
6326 7122 9.912634 ACTGCCATGCATAATTAATAATAACAC 57.087 29.630 0.00 0.00 38.13 3.32
6339 7135 9.478768 CAAATTTATTATGACTGCCATGCATAA 57.521 29.630 0.00 0.00 38.13 1.90
6341 7137 6.932400 CCAAATTTATTATGACTGCCATGCAT 59.068 34.615 0.00 0.00 38.13 3.96
6342 7138 6.127111 ACCAAATTTATTATGACTGCCATGCA 60.127 34.615 0.00 0.00 36.71 3.96
6344 7140 7.225145 CCAACCAAATTTATTATGACTGCCATG 59.775 37.037 0.00 0.00 36.71 3.66
6345 7141 7.125507 TCCAACCAAATTTATTATGACTGCCAT 59.874 33.333 0.00 0.00 39.25 4.40
6346 7142 6.438741 TCCAACCAAATTTATTATGACTGCCA 59.561 34.615 0.00 0.00 0.00 4.92
6347 7143 6.756542 GTCCAACCAAATTTATTATGACTGCC 59.243 38.462 0.00 0.00 0.00 4.85
6348 7144 7.489113 CAGTCCAACCAAATTTATTATGACTGC 59.511 37.037 19.80 0.00 0.00 4.40
6350 7146 8.522830 CACAGTCCAACCAAATTTATTATGACT 58.477 33.333 0.00 2.48 0.00 3.41
6351 7147 7.759433 CCACAGTCCAACCAAATTTATTATGAC 59.241 37.037 0.00 0.38 0.00 3.06
6352 7148 7.671819 TCCACAGTCCAACCAAATTTATTATGA 59.328 33.333 0.00 0.00 0.00 2.15
6353 7149 7.835822 TCCACAGTCCAACCAAATTTATTATG 58.164 34.615 0.00 0.00 0.00 1.90
6354 7150 7.893302 TCTCCACAGTCCAACCAAATTTATTAT 59.107 33.333 0.00 0.00 0.00 1.28
6356 7152 6.074648 TCTCCACAGTCCAACCAAATTTATT 58.925 36.000 0.00 0.00 0.00 1.40
6357 7153 5.640147 TCTCCACAGTCCAACCAAATTTAT 58.360 37.500 0.00 0.00 0.00 1.40
6359 7155 3.909732 TCTCCACAGTCCAACCAAATTT 58.090 40.909 0.00 0.00 0.00 1.82
6360 7156 3.593442 TCTCCACAGTCCAACCAAATT 57.407 42.857 0.00 0.00 0.00 1.82
6403 7199 1.271379 TCGCCATACTATGCTAACCGG 59.729 52.381 0.00 0.00 0.00 5.28
6459 7255 2.989909 ACAATTGTGATGGATGCTCGA 58.010 42.857 11.07 0.00 0.00 4.04
6479 7275 8.592529 AACCCTAAAAGTACCACAAACTTAAA 57.407 30.769 0.00 0.00 36.17 1.52
6481 7277 7.614974 ACAAACCCTAAAAGTACCACAAACTTA 59.385 33.333 0.00 0.00 36.17 2.24
6549 7362 7.125811 AGGACAACACCATAAGACATGTAGTAT 59.874 37.037 0.00 0.00 0.00 2.12
6821 7638 4.572795 CACATAACACCACTAACACACACA 59.427 41.667 0.00 0.00 0.00 3.72
7179 8159 6.262273 AGGACGATTCACTTCTTTTAAGCAAA 59.738 34.615 0.00 0.00 0.00 3.68
7182 8162 5.864628 AGGACGATTCACTTCTTTTAAGC 57.135 39.130 0.00 0.00 0.00 3.09
7183 8163 7.190920 ACAAGGACGATTCACTTCTTTTAAG 57.809 36.000 0.00 0.00 0.00 1.85
7190 8170 3.003275 TGCAAACAAGGACGATTCACTTC 59.997 43.478 0.00 0.00 0.00 3.01
7372 8357 3.236896 TGCATGGCATGATAGAGAGAGA 58.763 45.455 30.69 0.00 31.71 3.10
7430 8415 4.558178 TGATTCATTCATGCCAACACAAC 58.442 39.130 0.00 0.00 0.00 3.32
7644 8634 9.494271 TTCAAGGATGTGATTATTGAGCTATAC 57.506 33.333 0.00 0.00 32.00 1.47
7698 8688 0.950836 TCCAAGTTGTTGCACATCCG 59.049 50.000 1.45 0.00 31.64 4.18
7836 8826 1.153549 CCGGCTCAGCTAGTTCCAC 60.154 63.158 0.00 0.00 0.00 4.02
7920 8910 8.427902 AATGAGAGCACATATACTATCTGGAA 57.572 34.615 0.00 0.00 0.00 3.53
7945 8935 3.581101 AGCCTGCCTCATCTTATACAGA 58.419 45.455 0.00 0.00 35.33 3.41
8196 9189 7.441458 AGCTGTAGAATCCATTAATTAACGGAC 59.559 37.037 14.89 4.23 0.00 4.79
8307 9306 1.736586 CCGCGCCAATAGTCTCTCT 59.263 57.895 0.00 0.00 0.00 3.10
8780 9809 1.273606 CACTCCTTCATGTGGTCGTCT 59.726 52.381 7.23 0.00 0.00 4.18
8831 9860 0.654160 AGCGATCGTCGTCGTTGATA 59.346 50.000 17.81 0.00 42.81 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.