Multiple sequence alignment - TraesCS3D01G207600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G207600 chr3D 100.000 7008 0 0 1 7008 274336055 274343062 0.000000e+00 12942.0
1 TraesCS3D01G207600 chr3D 84.920 1492 128 38 2016 3466 609169530 609168095 0.000000e+00 1419.0
2 TraesCS3D01G207600 chr3D 85.379 1320 117 35 2016 3306 609215927 609214655 0.000000e+00 1299.0
3 TraesCS3D01G207600 chr3D 84.143 1173 131 31 4076 5212 609555797 609556950 0.000000e+00 1085.0
4 TraesCS3D01G207600 chr3D 95.611 638 28 0 1 638 550515656 550515019 0.000000e+00 1024.0
5 TraesCS3D01G207600 chr3D 83.917 1057 114 33 4014 5040 609214265 609213235 0.000000e+00 959.0
6 TraesCS3D01G207600 chr3D 87.020 755 69 16 5637 6376 609166994 609166254 0.000000e+00 824.0
7 TraesCS3D01G207600 chr3D 84.423 841 85 24 5637 6451 609213124 609212304 0.000000e+00 785.0
8 TraesCS3D01G207600 chr3D 85.299 551 60 9 4036 4579 609168070 609167534 3.700000e-152 549.0
9 TraesCS3D01G207600 chr3D 87.591 411 32 10 4649 5040 609167497 609167087 6.410000e-125 459.0
10 TraesCS3D01G207600 chr3D 82.796 279 23 13 964 1237 609217272 609217014 7.070000e-55 226.0
11 TraesCS3D01G207600 chr3D 82.857 210 19 9 3898 4104 609555238 609555433 9.350000e-39 172.0
12 TraesCS3D01G207600 chr3D 85.806 155 10 7 639 781 548522049 548521895 3.390000e-33 154.0
13 TraesCS3D01G207600 chr3D 93.407 91 6 0 1147 1237 609171623 609171533 1.230000e-27 135.0
14 TraesCS3D01G207600 chr3A 95.867 3968 92 22 1882 5784 359081830 359077870 0.000000e+00 6353.0
15 TraesCS3D01G207600 chr3A 85.148 1488 127 36 2016 3466 742614903 742613473 0.000000e+00 1437.0
16 TraesCS3D01G207600 chr3A 85.061 1486 135 35 2016 3466 742768923 742767490 0.000000e+00 1434.0
17 TraesCS3D01G207600 chr3A 94.032 821 24 6 924 1733 359082623 359081817 0.000000e+00 1221.0
18 TraesCS3D01G207600 chr3A 96.241 532 15 2 5779 6305 359077831 359077300 0.000000e+00 867.0
19 TraesCS3D01G207600 chr3A 86.305 701 71 15 5691 6376 742612335 742611645 0.000000e+00 739.0
20 TraesCS3D01G207600 chr3A 84.853 746 73 19 4315 5040 742767165 742766440 0.000000e+00 715.0
21 TraesCS3D01G207600 chr3A 87.267 644 59 11 5790 6421 742766197 742765565 0.000000e+00 713.0
22 TraesCS3D01G207600 chr3A 89.655 464 20 6 6469 6917 359077051 359076601 3.670000e-157 566.0
23 TraesCS3D01G207600 chr3A 85.481 551 59 9 4036 4579 742613447 742612911 7.940000e-154 555.0
24 TraesCS3D01G207600 chr3A 88.564 411 28 9 4649 5040 742612874 742612464 1.370000e-131 481.0
25 TraesCS3D01G207600 chr3A 89.041 146 7 3 6307 6451 359077173 359077036 9.350000e-39 172.0
26 TraesCS3D01G207600 chr3A 84.962 133 15 4 1147 1274 742770078 742769946 5.700000e-26 130.0
27 TraesCS3D01G207600 chr3A 98.246 57 0 1 6918 6974 359076360 359076305 1.610000e-16 99.0
28 TraesCS3D01G207600 chr3B 96.322 3181 65 7 1876 5019 359227772 359224607 0.000000e+00 5179.0
29 TraesCS3D01G207600 chr3B 96.246 1412 30 8 4999 6409 359224426 359223037 0.000000e+00 2292.0
30 TraesCS3D01G207600 chr3B 95.158 950 25 6 782 1718 359228828 359227887 0.000000e+00 1480.0
31 TraesCS3D01G207600 chr3B 84.151 1508 135 43 2016 3466 819899664 819898204 0.000000e+00 1365.0
32 TraesCS3D01G207600 chr3B 83.874 1203 120 32 2270 3450 819932804 819931654 0.000000e+00 1079.0
33 TraesCS3D01G207600 chr3B 84.519 1040 109 23 4036 5040 819931605 819930583 0.000000e+00 981.0
34 TraesCS3D01G207600 chr3B 91.396 523 24 8 6469 6974 359223032 359222514 0.000000e+00 697.0
35 TraesCS3D01G207600 chr3B 83.333 780 77 26 5637 6377 819897106 819896341 0.000000e+00 671.0
36 TraesCS3D01G207600 chr3B 87.293 543 52 7 4044 4579 819898170 819897638 7.780000e-169 604.0
37 TraesCS3D01G207600 chr3B 82.418 637 65 27 5637 6237 819930464 819929839 4.850000e-141 512.0
38 TraesCS3D01G207600 chr3B 86.861 411 35 10 4649 5040 819897600 819897190 6.450000e-120 442.0
39 TraesCS3D01G207600 chr3B 91.729 266 16 3 2016 2276 819933094 819932830 1.440000e-96 364.0
40 TraesCS3D01G207600 chr3B 88.333 180 10 7 1068 1237 819934371 819934193 9.210000e-49 206.0
41 TraesCS3D01G207600 chr3B 87.821 156 12 3 6223 6377 819929806 819929657 7.220000e-40 176.0
42 TraesCS3D01G207600 chr3B 94.505 91 5 0 1147 1237 819901639 819901549 2.640000e-29 141.0
43 TraesCS3D01G207600 chrUn 86.524 653 50 14 1 630 103238959 103238322 0.000000e+00 684.0
44 TraesCS3D01G207600 chr5D 85.809 451 29 13 186 630 553276756 553277177 4.990000e-121 446.0
45 TraesCS3D01G207600 chr5D 98.204 167 2 1 1732 1897 498492352 498492518 2.470000e-74 291.0
46 TraesCS3D01G207600 chr5D 97.093 172 3 2 1724 1894 297115603 297115773 8.890000e-74 289.0
47 TraesCS3D01G207600 chr5D 97.561 164 3 1 1732 1894 302016866 302016703 5.350000e-71 279.0
48 TraesCS3D01G207600 chr5D 96.471 170 5 1 1732 1901 434335000 434334832 5.350000e-71 279.0
49 TraesCS3D01G207600 chr5D 90.541 148 11 3 14 161 553219673 553219817 7.170000e-45 193.0
50 TraesCS3D01G207600 chr5D 90.541 148 11 3 14 161 553253999 553254143 7.170000e-45 193.0
51 TraesCS3D01G207600 chr5D 95.385 65 3 0 1159 1223 346876508 346876572 3.460000e-18 104.0
52 TraesCS3D01G207600 chr1D 85.246 427 39 7 1 406 99471056 99471479 1.090000e-112 418.0
53 TraesCS3D01G207600 chr1D 94.706 170 9 0 1725 1894 311986781 311986612 1.500000e-66 265.0
54 TraesCS3D01G207600 chr1D 83.942 137 7 3 40 161 444343604 444343740 4.440000e-22 117.0
55 TraesCS3D01G207600 chr5B 80.506 395 45 16 10 383 53259475 53259092 2.490000e-69 274.0
56 TraesCS3D01G207600 chr5B 95.385 65 3 0 1159 1223 404145209 404145145 3.460000e-18 104.0
57 TraesCS3D01G207600 chr7D 95.833 168 7 0 1729 1896 235502571 235502404 8.960000e-69 272.0
58 TraesCS3D01G207600 chr2D 96.364 165 6 0 1730 1894 189296929 189297093 8.960000e-69 272.0
59 TraesCS3D01G207600 chr2B 95.238 168 8 0 1729 1896 797534821 797534654 4.170000e-67 267.0
60 TraesCS3D01G207600 chr2B 91.099 191 11 6 1721 1910 418664260 418664075 3.240000e-63 254.0
61 TraesCS3D01G207600 chr4B 78.007 291 37 19 514 781 140889035 140889321 2.620000e-34 158.0
62 TraesCS3D01G207600 chr1B 88.800 125 11 3 514 636 60054499 60054376 4.380000e-32 150.0
63 TraesCS3D01G207600 chr1B 89.873 79 8 0 40 118 604321204 604321282 1.240000e-17 102.0
64 TraesCS3D01G207600 chr6A 90.164 61 5 1 44 104 14540225 14540284 2.100000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G207600 chr3D 274336055 274343062 7007 False 12942.000000 12942 100.00000 1 7008 1 chr3D.!!$F1 7007
1 TraesCS3D01G207600 chr3D 550515019 550515656 637 True 1024.000000 1024 95.61100 1 638 1 chr3D.!!$R2 637
2 TraesCS3D01G207600 chr3D 609212304 609217272 4968 True 817.250000 1299 84.12875 964 6451 4 chr3D.!!$R4 5487
3 TraesCS3D01G207600 chr3D 609166254 609171623 5369 True 677.200000 1419 87.64740 1147 6376 5 chr3D.!!$R3 5229
4 TraesCS3D01G207600 chr3D 609555238 609556950 1712 False 628.500000 1085 83.50000 3898 5212 2 chr3D.!!$F2 1314
5 TraesCS3D01G207600 chr3A 359076305 359082623 6318 True 1546.333333 6353 93.84700 924 6974 6 chr3A.!!$R1 6050
6 TraesCS3D01G207600 chr3A 742611645 742614903 3258 True 803.000000 1437 86.37450 2016 6376 4 chr3A.!!$R2 4360
7 TraesCS3D01G207600 chr3A 742765565 742770078 4513 True 748.000000 1434 85.53575 1147 6421 4 chr3A.!!$R3 5274
8 TraesCS3D01G207600 chr3B 359222514 359228828 6314 True 2412.000000 5179 94.78050 782 6974 4 chr3B.!!$R1 6192
9 TraesCS3D01G207600 chr3B 819896341 819901639 5298 True 644.600000 1365 87.22860 1147 6377 5 chr3B.!!$R2 5230
10 TraesCS3D01G207600 chr3B 819929657 819934371 4714 True 553.000000 1079 86.44900 1068 6377 6 chr3B.!!$R3 5309
11 TraesCS3D01G207600 chrUn 103238322 103238959 637 True 684.000000 684 86.52400 1 630 1 chrUn.!!$R1 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 869 0.029035 CTACGACTACGAGCGCCATT 59.971 55.000 2.29 0.0 42.66 3.16 F
1746 4123 1.006758 TGATGTACTCCCTCCGTTCCT 59.993 52.381 0.00 0.0 0.00 3.36 F
1795 4172 0.533491 GGTGGACTACATACGGTGCA 59.467 55.000 0.00 0.0 0.00 4.57 F
1796 4173 1.066716 GGTGGACTACATACGGTGCAA 60.067 52.381 0.00 0.0 35.72 4.08 F
3809 6604 1.670730 CACACACGCACAGCCCATA 60.671 57.895 0.00 0.0 0.00 2.74 F
4503 7731 1.086067 ACGCACTGCCATCATTCTCG 61.086 55.000 0.00 0.0 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1775 4152 0.822164 GCACCGTATGTAGTCCACCT 59.178 55.000 0.00 0.0 0.00 4.00 R
3727 6522 1.855513 CATGTGTGCAGGGTTTTGTG 58.144 50.000 0.00 0.0 0.00 3.33 R
3809 6604 0.962356 GCACCCTGCAGCAATAGTGT 60.962 55.000 8.66 0.0 44.26 3.55 R
3864 6659 4.637534 CAGCCAGCAGAAAAATAGCTCTAA 59.362 41.667 0.00 0.0 36.26 2.10 R
5495 8966 2.305927 TCACATTCACTCCTCCCCTTTC 59.694 50.000 0.00 0.0 0.00 2.62 R
6510 10307 1.464997 CCTACTTCGCAACCAGAAAGC 59.535 52.381 0.00 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.446099 GTTCAGATGCGTGCGAGGA 60.446 57.895 0.00 0.00 0.00 3.71
162 179 0.914417 TGAACCCCATCCTCCTCCAC 60.914 60.000 0.00 0.00 0.00 4.02
364 381 1.612146 TCTGCCGAGGACCATGGAA 60.612 57.895 21.47 0.00 0.00 3.53
431 448 0.762461 CATGGAGAGGAGAGGGGGAC 60.762 65.000 0.00 0.00 0.00 4.46
494 511 4.200283 GGCTCTCCCTCGCGTGAG 62.200 72.222 19.15 19.15 42.18 3.51
495 512 3.134792 GCTCTCCCTCGCGTGAGA 61.135 66.667 27.11 19.17 45.57 3.27
496 513 3.106552 CTCTCCCTCGCGTGAGAG 58.893 66.667 27.11 26.14 46.10 3.20
505 522 2.496817 GCGTGAGAGGAAGCGGAT 59.503 61.111 0.00 0.00 0.00 4.18
506 523 1.153549 GCGTGAGAGGAAGCGGATT 60.154 57.895 0.00 0.00 0.00 3.01
507 524 1.424493 GCGTGAGAGGAAGCGGATTG 61.424 60.000 0.00 0.00 0.00 2.67
508 525 0.807667 CGTGAGAGGAAGCGGATTGG 60.808 60.000 0.00 0.00 0.00 3.16
509 526 0.462759 GTGAGAGGAAGCGGATTGGG 60.463 60.000 0.00 0.00 0.00 4.12
510 527 1.147153 GAGAGGAAGCGGATTGGGG 59.853 63.158 0.00 0.00 0.00 4.96
511 528 1.306997 AGAGGAAGCGGATTGGGGA 60.307 57.895 0.00 0.00 0.00 4.81
512 529 1.153147 GAGGAAGCGGATTGGGGAC 60.153 63.158 0.00 0.00 0.00 4.46
513 530 1.910580 GAGGAAGCGGATTGGGGACA 61.911 60.000 0.00 0.00 39.83 4.02
514 531 1.452108 GGAAGCGGATTGGGGACAG 60.452 63.158 0.00 0.00 44.54 3.51
515 532 1.452108 GAAGCGGATTGGGGACAGG 60.452 63.158 0.00 0.00 44.54 4.00
516 533 1.910580 GAAGCGGATTGGGGACAGGA 61.911 60.000 0.00 0.00 44.54 3.86
517 534 1.915078 AAGCGGATTGGGGACAGGAG 61.915 60.000 0.00 0.00 44.54 3.69
518 535 2.367202 GCGGATTGGGGACAGGAGA 61.367 63.158 0.00 0.00 44.54 3.71
519 536 1.826024 CGGATTGGGGACAGGAGAG 59.174 63.158 0.00 0.00 44.54 3.20
520 537 1.690219 CGGATTGGGGACAGGAGAGG 61.690 65.000 0.00 0.00 44.54 3.69
521 538 0.326618 GGATTGGGGACAGGAGAGGA 60.327 60.000 0.00 0.00 44.54 3.71
522 539 1.584724 GATTGGGGACAGGAGAGGAA 58.415 55.000 0.00 0.00 44.54 3.36
523 540 1.488393 GATTGGGGACAGGAGAGGAAG 59.512 57.143 0.00 0.00 44.54 3.46
524 541 1.201429 TTGGGGACAGGAGAGGAAGC 61.201 60.000 0.00 0.00 44.54 3.86
525 542 2.726351 GGGGACAGGAGAGGAAGCG 61.726 68.421 0.00 0.00 0.00 4.68
526 543 2.726351 GGGACAGGAGAGGAAGCGG 61.726 68.421 0.00 0.00 0.00 5.52
527 544 1.682684 GGACAGGAGAGGAAGCGGA 60.683 63.158 0.00 0.00 0.00 5.54
528 545 1.045911 GGACAGGAGAGGAAGCGGAT 61.046 60.000 0.00 0.00 0.00 4.18
529 546 0.827368 GACAGGAGAGGAAGCGGATT 59.173 55.000 0.00 0.00 0.00 3.01
530 547 0.539051 ACAGGAGAGGAAGCGGATTG 59.461 55.000 0.00 0.00 0.00 2.67
531 548 0.179062 CAGGAGAGGAAGCGGATTGG 60.179 60.000 0.00 0.00 0.00 3.16
532 549 1.147153 GGAGAGGAAGCGGATTGGG 59.853 63.158 0.00 0.00 0.00 4.12
533 550 1.147153 GAGAGGAAGCGGATTGGGG 59.853 63.158 0.00 0.00 0.00 4.96
534 551 1.306997 AGAGGAAGCGGATTGGGGA 60.307 57.895 0.00 0.00 0.00 4.81
535 552 1.147153 GAGGAAGCGGATTGGGGAG 59.853 63.158 0.00 0.00 0.00 4.30
536 553 1.306997 AGGAAGCGGATTGGGGAGA 60.307 57.895 0.00 0.00 0.00 3.71
537 554 0.914417 AGGAAGCGGATTGGGGAGAA 60.914 55.000 0.00 0.00 0.00 2.87
538 555 0.034477 GGAAGCGGATTGGGGAGAAA 60.034 55.000 0.00 0.00 0.00 2.52
539 556 1.095600 GAAGCGGATTGGGGAGAAAC 58.904 55.000 0.00 0.00 0.00 2.78
540 557 0.323451 AAGCGGATTGGGGAGAAACC 60.323 55.000 0.00 0.00 38.08 3.27
550 567 3.154589 GGAGAAACCCTGGCGTTAG 57.845 57.895 1.74 0.00 0.00 2.34
551 568 1.025113 GGAGAAACCCTGGCGTTAGC 61.025 60.000 1.74 0.00 44.18 3.09
564 581 3.580794 GCGTTAGCCTTTTATACCACG 57.419 47.619 0.00 0.00 37.42 4.94
565 582 2.931969 GCGTTAGCCTTTTATACCACGT 59.068 45.455 0.00 0.00 37.42 4.49
566 583 4.111916 GCGTTAGCCTTTTATACCACGTA 58.888 43.478 0.00 0.00 37.42 3.57
567 584 4.207841 GCGTTAGCCTTTTATACCACGTAG 59.792 45.833 0.00 0.00 37.42 3.51
568 585 6.187829 GCGTTAGCCTTTTATACCACGTAGT 61.188 44.000 0.00 0.00 38.63 2.73
584 601 4.719040 ACGTAGTGAAATTCCGAAAATGC 58.281 39.130 0.00 0.00 42.51 3.56
585 602 4.095610 CGTAGTGAAATTCCGAAAATGCC 58.904 43.478 0.00 0.00 0.00 4.40
586 603 3.592898 AGTGAAATTCCGAAAATGCCC 57.407 42.857 0.00 0.00 0.00 5.36
587 604 3.165071 AGTGAAATTCCGAAAATGCCCT 58.835 40.909 0.00 0.00 0.00 5.19
588 605 3.193479 AGTGAAATTCCGAAAATGCCCTC 59.807 43.478 0.00 0.00 0.00 4.30
589 606 2.163412 TGAAATTCCGAAAATGCCCTCG 59.837 45.455 0.00 0.00 34.83 4.63
593 610 3.187058 CGAAAATGCCCTCGGTGG 58.813 61.111 0.00 0.00 0.00 4.61
602 619 3.000819 CCTCGGTGGGGTGCTGTA 61.001 66.667 0.00 0.00 0.00 2.74
603 620 2.367202 CCTCGGTGGGGTGCTGTAT 61.367 63.158 0.00 0.00 0.00 2.29
604 621 1.602237 CTCGGTGGGGTGCTGTATT 59.398 57.895 0.00 0.00 0.00 1.89
605 622 0.828022 CTCGGTGGGGTGCTGTATTA 59.172 55.000 0.00 0.00 0.00 0.98
606 623 1.208535 CTCGGTGGGGTGCTGTATTAA 59.791 52.381 0.00 0.00 0.00 1.40
607 624 1.065998 TCGGTGGGGTGCTGTATTAAC 60.066 52.381 0.00 0.00 0.00 2.01
608 625 1.339247 CGGTGGGGTGCTGTATTAACA 60.339 52.381 0.00 0.00 0.00 2.41
618 635 2.869101 TGTATTAACAGGCAGTGGCA 57.131 45.000 20.04 0.00 43.71 4.92
619 636 2.432444 TGTATTAACAGGCAGTGGCAC 58.568 47.619 20.04 10.29 43.71 5.01
620 637 1.396996 GTATTAACAGGCAGTGGCACG 59.603 52.381 20.04 11.83 43.71 5.34
621 638 0.036164 ATTAACAGGCAGTGGCACGA 59.964 50.000 20.04 0.16 43.71 4.35
622 639 0.602638 TTAACAGGCAGTGGCACGAG 60.603 55.000 20.04 10.32 43.71 4.18
623 640 1.468506 TAACAGGCAGTGGCACGAGA 61.469 55.000 20.04 0.00 43.71 4.04
624 641 2.116983 AACAGGCAGTGGCACGAGAT 62.117 55.000 20.04 0.00 43.71 2.75
625 642 1.812922 CAGGCAGTGGCACGAGATC 60.813 63.158 20.04 5.56 43.71 2.75
626 643 1.986757 AGGCAGTGGCACGAGATCT 60.987 57.895 20.04 0.00 43.71 2.75
627 644 1.078848 GGCAGTGGCACGAGATCTT 60.079 57.895 12.58 0.00 43.71 2.40
628 645 0.674895 GGCAGTGGCACGAGATCTTT 60.675 55.000 12.58 0.00 43.71 2.52
629 646 1.405526 GGCAGTGGCACGAGATCTTTA 60.406 52.381 12.58 0.00 43.71 1.85
630 647 2.555199 GCAGTGGCACGAGATCTTTAT 58.445 47.619 12.71 0.00 40.72 1.40
631 648 2.939103 GCAGTGGCACGAGATCTTTATT 59.061 45.455 12.71 0.00 40.72 1.40
632 649 3.242543 GCAGTGGCACGAGATCTTTATTG 60.243 47.826 12.71 1.29 40.72 1.90
633 650 2.939103 AGTGGCACGAGATCTTTATTGC 59.061 45.455 12.71 3.55 0.00 3.56
634 651 1.933181 TGGCACGAGATCTTTATTGCG 59.067 47.619 0.00 0.00 0.00 4.85
635 652 1.261619 GGCACGAGATCTTTATTGCGG 59.738 52.381 0.00 0.00 0.00 5.69
636 653 1.261619 GCACGAGATCTTTATTGCGGG 59.738 52.381 0.00 0.00 0.00 6.13
637 654 1.261619 CACGAGATCTTTATTGCGGGC 59.738 52.381 0.00 0.00 0.00 6.13
638 655 1.139058 ACGAGATCTTTATTGCGGGCT 59.861 47.619 0.00 0.00 0.00 5.19
639 656 2.213499 CGAGATCTTTATTGCGGGCTT 58.787 47.619 0.00 0.00 0.00 4.35
640 657 2.221981 CGAGATCTTTATTGCGGGCTTC 59.778 50.000 0.00 0.00 0.00 3.86
641 658 3.206150 GAGATCTTTATTGCGGGCTTCA 58.794 45.455 0.00 0.00 0.00 3.02
642 659 3.817647 GAGATCTTTATTGCGGGCTTCAT 59.182 43.478 0.00 0.00 0.00 2.57
643 660 4.210331 AGATCTTTATTGCGGGCTTCATT 58.790 39.130 0.00 0.00 0.00 2.57
644 661 3.781079 TCTTTATTGCGGGCTTCATTG 57.219 42.857 0.00 0.00 0.00 2.82
645 662 2.159254 TCTTTATTGCGGGCTTCATTGC 60.159 45.455 0.00 0.00 0.00 3.56
646 663 1.473258 TTATTGCGGGCTTCATTGCT 58.527 45.000 0.00 0.00 0.00 3.91
647 664 2.340210 TATTGCGGGCTTCATTGCTA 57.660 45.000 0.00 0.00 0.00 3.49
648 665 0.740737 ATTGCGGGCTTCATTGCTAC 59.259 50.000 0.00 0.00 0.00 3.58
649 666 0.607762 TTGCGGGCTTCATTGCTACA 60.608 50.000 0.00 0.00 0.00 2.74
650 667 1.026182 TGCGGGCTTCATTGCTACAG 61.026 55.000 0.00 0.00 0.00 2.74
651 668 1.718757 GCGGGCTTCATTGCTACAGG 61.719 60.000 0.00 0.00 0.00 4.00
652 669 1.718757 CGGGCTTCATTGCTACAGGC 61.719 60.000 0.00 0.00 42.22 4.85
653 670 1.718757 GGGCTTCATTGCTACAGGCG 61.719 60.000 0.00 0.00 45.43 5.52
654 671 1.063166 GCTTCATTGCTACAGGCGC 59.937 57.895 0.00 0.00 45.43 6.53
655 672 1.349627 CTTCATTGCTACAGGCGCG 59.650 57.895 0.00 0.00 45.43 6.86
656 673 2.637715 CTTCATTGCTACAGGCGCGC 62.638 60.000 25.94 25.94 45.43 6.86
657 674 3.197790 CATTGCTACAGGCGCGCT 61.198 61.111 32.29 14.49 45.43 5.92
658 675 3.197790 ATTGCTACAGGCGCGCTG 61.198 61.111 32.29 26.80 45.43 5.18
677 694 3.515286 GTCGATCCGACGGCCAGA 61.515 66.667 9.66 4.94 46.56 3.86
678 695 3.515286 TCGATCCGACGGCCAGAC 61.515 66.667 9.66 0.00 0.00 3.51
679 696 3.518998 CGATCCGACGGCCAGACT 61.519 66.667 9.66 0.00 0.00 3.24
680 697 2.413765 GATCCGACGGCCAGACTC 59.586 66.667 9.66 0.00 0.00 3.36
681 698 3.471244 GATCCGACGGCCAGACTCG 62.471 68.421 9.66 2.62 0.00 4.18
682 699 3.989838 ATCCGACGGCCAGACTCGA 62.990 63.158 9.66 0.00 0.00 4.04
683 700 3.518998 CCGACGGCCAGACTCGAT 61.519 66.667 2.24 0.00 0.00 3.59
684 701 2.490217 CGACGGCCAGACTCGATT 59.510 61.111 2.24 0.00 0.00 3.34
685 702 1.153823 CGACGGCCAGACTCGATTT 60.154 57.895 2.24 0.00 0.00 2.17
686 703 0.099968 CGACGGCCAGACTCGATTTA 59.900 55.000 2.24 0.00 0.00 1.40
687 704 1.468565 CGACGGCCAGACTCGATTTAA 60.469 52.381 2.24 0.00 0.00 1.52
688 705 1.925185 GACGGCCAGACTCGATTTAAC 59.075 52.381 2.24 0.00 0.00 2.01
689 706 0.921347 CGGCCAGACTCGATTTAACG 59.079 55.000 2.24 0.00 0.00 3.18
690 707 1.287425 GGCCAGACTCGATTTAACGG 58.713 55.000 0.00 0.00 0.00 4.44
691 708 1.134907 GGCCAGACTCGATTTAACGGA 60.135 52.381 0.00 0.00 0.00 4.69
692 709 1.925185 GCCAGACTCGATTTAACGGAC 59.075 52.381 0.00 0.00 0.00 4.79
693 710 2.673043 GCCAGACTCGATTTAACGGACA 60.673 50.000 0.00 0.00 0.00 4.02
694 711 3.179830 CCAGACTCGATTTAACGGACAG 58.820 50.000 0.00 0.00 0.00 3.51
695 712 3.119602 CCAGACTCGATTTAACGGACAGA 60.120 47.826 0.00 0.00 0.00 3.41
696 713 4.482386 CAGACTCGATTTAACGGACAGAA 58.518 43.478 0.00 0.00 0.00 3.02
697 714 4.921515 CAGACTCGATTTAACGGACAGAAA 59.078 41.667 0.00 0.00 0.00 2.52
698 715 5.577164 CAGACTCGATTTAACGGACAGAAAT 59.423 40.000 0.00 0.00 0.00 2.17
699 716 5.577164 AGACTCGATTTAACGGACAGAAATG 59.423 40.000 0.00 0.00 0.00 2.32
700 717 4.092968 ACTCGATTTAACGGACAGAAATGC 59.907 41.667 0.00 0.00 0.00 3.56
701 718 3.997681 TCGATTTAACGGACAGAAATGCA 59.002 39.130 0.00 0.00 0.00 3.96
702 719 4.634004 TCGATTTAACGGACAGAAATGCAT 59.366 37.500 0.00 0.00 0.00 3.96
703 720 4.963953 CGATTTAACGGACAGAAATGCATC 59.036 41.667 0.00 0.00 0.00 3.91
704 721 5.447144 CGATTTAACGGACAGAAATGCATCA 60.447 40.000 0.00 0.00 0.00 3.07
705 722 5.697473 TTTAACGGACAGAAATGCATCAA 57.303 34.783 0.00 0.00 0.00 2.57
706 723 3.837213 AACGGACAGAAATGCATCAAG 57.163 42.857 0.00 0.00 0.00 3.02
707 724 1.470098 ACGGACAGAAATGCATCAAGC 59.530 47.619 0.00 0.00 45.96 4.01
720 737 4.297944 GCATCAAGCAAACAAATCGAAC 57.702 40.909 0.00 0.00 44.79 3.95
721 738 3.181550 GCATCAAGCAAACAAATCGAACG 60.182 43.478 0.00 0.00 44.79 3.95
722 739 2.993545 TCAAGCAAACAAATCGAACGG 58.006 42.857 0.00 0.00 0.00 4.44
723 740 1.451651 CAAGCAAACAAATCGAACGGC 59.548 47.619 0.00 0.00 0.00 5.68
724 741 0.039527 AGCAAACAAATCGAACGGCC 60.040 50.000 0.00 0.00 0.00 6.13
725 742 0.318275 GCAAACAAATCGAACGGCCA 60.318 50.000 2.24 0.00 0.00 5.36
726 743 1.685302 CAAACAAATCGAACGGCCAG 58.315 50.000 2.24 0.00 0.00 4.85
727 744 1.265635 CAAACAAATCGAACGGCCAGA 59.734 47.619 2.24 0.00 0.00 3.86
728 745 1.600023 AACAAATCGAACGGCCAGAA 58.400 45.000 2.24 0.00 0.00 3.02
729 746 1.821216 ACAAATCGAACGGCCAGAAT 58.179 45.000 2.24 0.00 0.00 2.40
730 747 1.468520 ACAAATCGAACGGCCAGAATG 59.531 47.619 2.24 3.25 0.00 2.67
731 748 0.451783 AAATCGAACGGCCAGAATGC 59.548 50.000 2.24 0.00 31.97 3.56
732 749 0.392998 AATCGAACGGCCAGAATGCT 60.393 50.000 2.24 0.00 31.97 3.79
733 750 0.811616 ATCGAACGGCCAGAATGCTC 60.812 55.000 2.24 0.00 31.97 4.26
734 751 1.448540 CGAACGGCCAGAATGCTCT 60.449 57.895 2.24 0.00 31.97 4.09
747 764 5.075858 AGAATGCTCTGAACTCTGAGAAG 57.924 43.478 12.44 6.11 42.37 2.85
748 765 3.891422 ATGCTCTGAACTCTGAGAAGG 57.109 47.619 12.44 0.00 42.37 3.46
749 766 1.274728 TGCTCTGAACTCTGAGAAGGC 59.725 52.381 12.44 10.94 42.37 4.35
750 767 1.550072 GCTCTGAACTCTGAGAAGGCT 59.450 52.381 12.44 0.00 42.37 4.58
751 768 2.417243 GCTCTGAACTCTGAGAAGGCTC 60.417 54.545 12.44 0.84 42.37 4.70
752 769 1.815613 TCTGAACTCTGAGAAGGCTCG 59.184 52.381 12.44 0.00 44.33 5.03
753 770 0.891373 TGAACTCTGAGAAGGCTCGG 59.109 55.000 12.44 0.00 46.81 4.63
754 771 0.174617 GAACTCTGAGAAGGCTCGGG 59.825 60.000 12.44 0.00 45.72 5.14
755 772 0.251832 AACTCTGAGAAGGCTCGGGA 60.252 55.000 12.44 0.00 45.72 5.14
756 773 0.682855 ACTCTGAGAAGGCTCGGGAG 60.683 60.000 12.44 0.00 45.72 4.30
757 774 0.682855 CTCTGAGAAGGCTCGGGAGT 60.683 60.000 0.00 0.00 45.72 3.85
758 775 0.967887 TCTGAGAAGGCTCGGGAGTG 60.968 60.000 0.00 0.00 45.72 3.51
765 782 2.586792 GCTCGGGAGTGCCTCAAT 59.413 61.111 0.00 0.00 43.10 2.57
766 783 1.522580 GCTCGGGAGTGCCTCAATC 60.523 63.158 0.00 0.00 43.10 2.67
767 784 1.965754 GCTCGGGAGTGCCTCAATCT 61.966 60.000 0.00 0.00 43.10 2.40
768 785 0.103937 CTCGGGAGTGCCTCAATCTC 59.896 60.000 0.00 0.00 31.08 2.75
769 786 0.324738 TCGGGAGTGCCTCAATCTCT 60.325 55.000 0.00 0.00 31.08 3.10
770 787 0.539051 CGGGAGTGCCTCAATCTCTT 59.461 55.000 0.00 0.00 31.08 2.85
771 788 1.757118 CGGGAGTGCCTCAATCTCTTA 59.243 52.381 0.00 0.00 31.08 2.10
772 789 2.366916 CGGGAGTGCCTCAATCTCTTAT 59.633 50.000 0.00 0.00 31.08 1.73
773 790 3.181461 CGGGAGTGCCTCAATCTCTTATT 60.181 47.826 0.00 0.00 31.08 1.40
774 791 4.684485 CGGGAGTGCCTCAATCTCTTATTT 60.684 45.833 0.00 0.00 31.08 1.40
775 792 4.819088 GGGAGTGCCTCAATCTCTTATTTC 59.181 45.833 0.00 0.00 31.08 2.17
776 793 5.397334 GGGAGTGCCTCAATCTCTTATTTCT 60.397 44.000 0.00 0.00 31.08 2.52
777 794 5.757808 GGAGTGCCTCAATCTCTTATTTCTC 59.242 44.000 4.85 0.00 31.08 2.87
778 795 5.355596 AGTGCCTCAATCTCTTATTTCTCG 58.644 41.667 0.00 0.00 0.00 4.04
779 796 5.127845 AGTGCCTCAATCTCTTATTTCTCGA 59.872 40.000 0.00 0.00 0.00 4.04
780 797 5.988561 GTGCCTCAATCTCTTATTTCTCGAT 59.011 40.000 0.00 0.00 0.00 3.59
788 805 9.254133 CAATCTCTTATTTCTCGATGTATGTGT 57.746 33.333 0.00 0.00 0.00 3.72
799 816 7.569297 TCTCGATGTATGTGTGTGTTAAAAAC 58.431 34.615 0.00 0.00 0.00 2.43
815 832 4.389890 AAAAACGGAAAACCCCACTTAC 57.610 40.909 0.00 0.00 0.00 2.34
852 869 0.029035 CTACGACTACGAGCGCCATT 59.971 55.000 2.29 0.00 42.66 3.16
853 870 1.262417 CTACGACTACGAGCGCCATTA 59.738 52.381 2.29 0.00 42.66 1.90
914 931 5.585047 GCATAATAAAAGGAGACGTTGGAGT 59.415 40.000 0.00 0.00 30.42 3.85
1333 3646 2.032634 TGTGCATCGCCGGAAGAAC 61.033 57.895 5.05 0.00 0.00 3.01
1554 3889 5.694006 CGCATATGAACTGGGAAAACAAAAA 59.306 36.000 6.97 0.00 0.00 1.94
1616 3955 1.039856 GTGTTTGTTGTGGGCTCCAT 58.960 50.000 0.00 0.00 35.28 3.41
1638 3977 8.713971 TCCATCCACTGATAAGTGTATTATTGT 58.286 33.333 9.47 0.00 38.07 2.71
1639 3978 9.996554 CCATCCACTGATAAGTGTATTATTGTA 57.003 33.333 9.47 0.00 38.07 2.41
1739 4116 7.263496 AGTAAAACGTAATGATGTACTCCCTC 58.737 38.462 0.00 0.00 0.00 4.30
1743 4120 3.067742 CGTAATGATGTACTCCCTCCGTT 59.932 47.826 0.00 0.00 0.00 4.44
1744 4121 3.821421 AATGATGTACTCCCTCCGTTC 57.179 47.619 0.00 0.00 0.00 3.95
1745 4122 1.481871 TGATGTACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
1746 4123 1.006758 TGATGTACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
1749 4126 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
1750 4127 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
1751 4128 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
1752 4129 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
1753 4130 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
1755 4132 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1756 4133 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1757 4134 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1758 4135 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1759 4136 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1761 4138 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
1762 4139 7.441458 CCTCCGTTCCTAAATATAAGTCTTTGG 59.559 40.741 0.00 0.00 0.00 3.28
1763 4140 8.081517 TCCGTTCCTAAATATAAGTCTTTGGA 57.918 34.615 0.00 0.00 0.00 3.53
1764 4141 8.202137 TCCGTTCCTAAATATAAGTCTTTGGAG 58.798 37.037 0.00 0.00 0.00 3.86
1765 4142 8.202137 CCGTTCCTAAATATAAGTCTTTGGAGA 58.798 37.037 0.00 0.00 0.00 3.71
1766 4143 9.250624 CGTTCCTAAATATAAGTCTTTGGAGAG 57.749 37.037 0.00 0.00 31.07 3.20
1791 4168 3.984508 CACTAGGTGGACTACATACGG 57.015 52.381 0.00 0.00 0.00 4.02
1792 4169 3.285484 CACTAGGTGGACTACATACGGT 58.715 50.000 0.00 0.00 0.00 4.83
1793 4170 3.066342 CACTAGGTGGACTACATACGGTG 59.934 52.174 0.00 0.00 0.00 4.94
1794 4171 0.822164 AGGTGGACTACATACGGTGC 59.178 55.000 0.00 0.00 0.00 5.01
1795 4172 0.533491 GGTGGACTACATACGGTGCA 59.467 55.000 0.00 0.00 0.00 4.57
1796 4173 1.066716 GGTGGACTACATACGGTGCAA 60.067 52.381 0.00 0.00 35.72 4.08
1797 4174 2.613474 GGTGGACTACATACGGTGCAAA 60.613 50.000 0.00 0.00 35.72 3.68
1798 4175 3.068560 GTGGACTACATACGGTGCAAAA 58.931 45.455 0.00 0.00 35.72 2.44
1799 4176 3.687698 GTGGACTACATACGGTGCAAAAT 59.312 43.478 0.00 0.00 35.72 1.82
1800 4177 3.687212 TGGACTACATACGGTGCAAAATG 59.313 43.478 0.00 0.00 31.30 2.32
1801 4178 3.936453 GGACTACATACGGTGCAAAATGA 59.064 43.478 0.00 0.00 0.00 2.57
1802 4179 4.393680 GGACTACATACGGTGCAAAATGAA 59.606 41.667 0.00 0.00 0.00 2.57
1803 4180 5.065988 GGACTACATACGGTGCAAAATGAAT 59.934 40.000 0.00 0.00 0.00 2.57
1804 4181 5.879237 ACTACATACGGTGCAAAATGAATG 58.121 37.500 0.00 0.00 0.00 2.67
1805 4182 5.645929 ACTACATACGGTGCAAAATGAATGA 59.354 36.000 0.00 0.00 0.00 2.57
1806 4183 5.384063 ACATACGGTGCAAAATGAATGAA 57.616 34.783 0.00 0.00 0.00 2.57
1807 4184 5.964758 ACATACGGTGCAAAATGAATGAAT 58.035 33.333 0.00 0.00 0.00 2.57
1808 4185 6.035843 ACATACGGTGCAAAATGAATGAATC 58.964 36.000 0.00 0.00 0.00 2.52
1809 4186 4.789012 ACGGTGCAAAATGAATGAATCT 57.211 36.364 0.00 0.00 0.00 2.40
1810 4187 5.895636 ACGGTGCAAAATGAATGAATCTA 57.104 34.783 0.00 0.00 0.00 1.98
1811 4188 5.640732 ACGGTGCAAAATGAATGAATCTAC 58.359 37.500 0.00 0.00 0.00 2.59
1812 4189 5.182950 ACGGTGCAAAATGAATGAATCTACA 59.817 36.000 0.00 0.00 0.00 2.74
1813 4190 5.512788 CGGTGCAAAATGAATGAATCTACAC 59.487 40.000 0.00 0.00 0.00 2.90
1814 4191 6.623549 CGGTGCAAAATGAATGAATCTACACT 60.624 38.462 0.00 0.00 0.00 3.55
1815 4192 7.092716 GGTGCAAAATGAATGAATCTACACTT 58.907 34.615 0.00 0.00 0.00 3.16
1816 4193 8.243426 GGTGCAAAATGAATGAATCTACACTTA 58.757 33.333 0.00 0.00 0.00 2.24
1817 4194 9.624697 GTGCAAAATGAATGAATCTACACTTAA 57.375 29.630 0.00 0.00 0.00 1.85
1838 4215 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
1843 4220 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
1844 4221 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
1845 4222 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
1846 4223 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
1847 4224 7.764443 GCATCTATATACATCCGTATGTGGTTT 59.236 37.037 3.56 0.00 45.99 3.27
1854 4231 6.474140 ACATCCGTATGTGGTTTATAGTGA 57.526 37.500 0.00 0.00 44.79 3.41
1855 4232 6.880484 ACATCCGTATGTGGTTTATAGTGAA 58.120 36.000 0.00 0.00 44.79 3.18
1856 4233 7.332557 ACATCCGTATGTGGTTTATAGTGAAA 58.667 34.615 0.00 0.00 44.79 2.69
1857 4234 7.825270 ACATCCGTATGTGGTTTATAGTGAAAA 59.175 33.333 0.00 0.00 44.79 2.29
1858 4235 7.599630 TCCGTATGTGGTTTATAGTGAAAAC 57.400 36.000 0.00 0.00 36.34 2.43
1859 4236 7.388437 TCCGTATGTGGTTTATAGTGAAAACT 58.612 34.615 0.00 0.00 37.09 2.66
1860 4237 7.546667 TCCGTATGTGGTTTATAGTGAAAACTC 59.453 37.037 0.00 0.00 37.09 3.01
1861 4238 7.548075 CCGTATGTGGTTTATAGTGAAAACTCT 59.452 37.037 0.00 0.00 37.09 3.24
1862 4239 9.577110 CGTATGTGGTTTATAGTGAAAACTCTA 57.423 33.333 0.00 0.00 37.09 2.43
1865 4242 9.787435 ATGTGGTTTATAGTGAAAACTCTACAA 57.213 29.630 0.00 0.00 37.09 2.41
1866 4243 9.616156 TGTGGTTTATAGTGAAAACTCTACAAA 57.384 29.630 0.00 0.00 37.09 2.83
1967 4346 3.001736 GGCTCTATGAACACGATTTCAGC 59.998 47.826 8.90 6.81 38.87 4.26
2225 4622 2.042464 GGTGGAGATGTCTATGCTGGA 58.958 52.381 0.00 0.00 0.00 3.86
2587 5046 9.087424 CATCTGTTCGACTGAATATTTCTGTTA 57.913 33.333 0.00 0.00 41.16 2.41
3018 5502 2.467566 ACCTACAAAAGCCTGGTACG 57.532 50.000 0.00 0.00 0.00 3.67
3094 5611 4.262249 GGCCTGAGGTGTATAGTCATCTTC 60.262 50.000 0.00 0.00 0.00 2.87
3568 6360 6.030228 GCTTACTTTTAGGTGCACATGAATC 58.970 40.000 20.43 0.00 0.00 2.52
3577 6369 4.097714 GGTGCACATGAATCACAAATACG 58.902 43.478 20.43 0.00 32.69 3.06
3579 6371 4.554586 GTGCACATGAATCACAAATACGTG 59.445 41.667 13.17 0.00 38.29 4.49
3704 6499 4.767255 CTGCCTGCCCGACTCACC 62.767 72.222 0.00 0.00 0.00 4.02
3727 6522 4.376819 CGTCAACTCTTTGAGCTTGATCAC 60.377 45.833 0.00 0.00 42.60 3.06
3730 6525 4.077300 ACTCTTTGAGCTTGATCACACA 57.923 40.909 0.00 0.00 32.04 3.72
3809 6604 1.670730 CACACACGCACAGCCCATA 60.671 57.895 0.00 0.00 0.00 2.74
3864 6659 1.682854 CATGCATTTAACTGGGCCGAT 59.317 47.619 0.00 0.00 0.00 4.18
4124 7313 2.514803 CCGAGTCAAAATCCTTGGGTT 58.485 47.619 0.00 0.00 0.00 4.11
4313 7534 6.942576 AGCTTAAATCTTGGAGCAGTTCTTTA 59.057 34.615 0.00 0.00 37.59 1.85
4503 7731 1.086067 ACGCACTGCCATCATTCTCG 61.086 55.000 0.00 0.00 0.00 4.04
4567 7800 7.441157 TCTGGCAGAAGGTTTGTAATTATATCG 59.559 37.037 16.28 0.00 0.00 2.92
4631 7865 2.530460 TCATTGCCATGCTTTACCCT 57.470 45.000 0.00 0.00 0.00 4.34
5053 8521 7.631717 ATTCTTTAGATTTGCTTCCAGTACC 57.368 36.000 0.00 0.00 0.00 3.34
5261 8732 7.752239 CACACTTTATGCTTTTGAATAGGTCAG 59.248 37.037 0.00 0.00 37.61 3.51
5495 8966 3.837213 CCAGTTTGGTAATCAGCACTG 57.163 47.619 0.00 0.00 37.83 3.66
5499 8970 5.455392 CAGTTTGGTAATCAGCACTGAAAG 58.545 41.667 4.14 0.00 43.58 2.62
5743 9245 9.042008 CCAACTTTATACATACAGGTGTCATAC 57.958 37.037 1.02 0.00 28.24 2.39
6065 9638 7.292591 AGCTATTGTACCATATACCAAAGTCCT 59.707 37.037 0.00 0.00 0.00 3.85
6417 10214 3.289407 TGGAACAACATGGTTCTGACA 57.711 42.857 12.67 2.84 45.07 3.58
6418 10215 3.831323 TGGAACAACATGGTTCTGACAT 58.169 40.909 12.67 0.00 45.07 3.06
6419 10216 3.820467 TGGAACAACATGGTTCTGACATC 59.180 43.478 12.67 0.00 45.07 3.06
6420 10217 3.191371 GGAACAACATGGTTCTGACATCC 59.809 47.826 12.67 5.43 45.07 3.51
6421 10218 2.426522 ACAACATGGTTCTGACATCCG 58.573 47.619 0.00 0.00 0.00 4.18
6422 10219 1.131126 CAACATGGTTCTGACATCCGC 59.869 52.381 0.00 0.00 0.00 5.54
6423 10220 0.324614 ACATGGTTCTGACATCCGCA 59.675 50.000 0.00 0.00 0.00 5.69
6424 10221 1.065199 ACATGGTTCTGACATCCGCAT 60.065 47.619 0.00 0.00 0.00 4.73
6425 10222 1.332686 CATGGTTCTGACATCCGCATG 59.667 52.381 0.00 0.00 35.92 4.06
6426 10223 0.324614 TGGTTCTGACATCCGCATGT 59.675 50.000 0.00 0.00 46.64 3.21
6427 10224 0.729116 GGTTCTGACATCCGCATGTG 59.271 55.000 0.00 0.00 43.79 3.21
6428 10225 1.675714 GGTTCTGACATCCGCATGTGA 60.676 52.381 8.11 0.00 43.79 3.58
6429 10226 2.283298 GTTCTGACATCCGCATGTGAT 58.717 47.619 8.11 0.63 43.79 3.06
6430 10227 1.944032 TCTGACATCCGCATGTGATG 58.056 50.000 19.54 19.54 43.79 3.07
6451 10248 8.374327 TGATGTATCACATTCTGATTCATGTC 57.626 34.615 7.04 0.00 43.71 3.06
6452 10249 6.833342 TGTATCACATTCTGATTCATGTCG 57.167 37.500 0.00 0.00 40.38 4.35
6453 10250 5.754890 TGTATCACATTCTGATTCATGTCGG 59.245 40.000 0.00 0.00 40.38 4.79
6454 10251 4.206477 TCACATTCTGATTCATGTCGGT 57.794 40.909 0.00 0.00 30.90 4.69
6455 10252 4.578871 TCACATTCTGATTCATGTCGGTT 58.421 39.130 0.00 0.00 30.90 4.44
6456 10253 5.003160 TCACATTCTGATTCATGTCGGTTT 58.997 37.500 0.00 0.00 30.90 3.27
6457 10254 5.122239 TCACATTCTGATTCATGTCGGTTTC 59.878 40.000 0.00 0.00 30.90 2.78
6458 10255 4.093408 ACATTCTGATTCATGTCGGTTTCG 59.907 41.667 0.00 0.00 37.82 3.46
6459 10256 3.586100 TCTGATTCATGTCGGTTTCGA 57.414 42.857 0.00 0.00 43.86 3.71
6510 10307 3.853831 TGCTGTAACATGCATTCCTTG 57.146 42.857 0.00 0.00 33.94 3.61
6522 10319 2.680577 CATTCCTTGCTTTCTGGTTGC 58.319 47.619 0.00 0.00 0.00 4.17
6596 10405 7.775397 ACAAATATTGTTAATGATTGCTGCC 57.225 32.000 0.00 0.00 42.22 4.85
6645 10454 1.869767 CACAGAGAAGAGTGTTGCACC 59.130 52.381 0.00 0.00 34.49 5.01
6646 10455 1.486310 ACAGAGAAGAGTGTTGCACCA 59.514 47.619 0.00 0.00 34.49 4.17
6647 10456 1.869767 CAGAGAAGAGTGTTGCACCAC 59.130 52.381 6.22 6.22 34.49 4.16
6723 10532 1.460504 ATCTGGACGCTCGTAAGTGA 58.539 50.000 0.00 0.00 36.80 3.41
6724 10533 0.520404 TCTGGACGCTCGTAAGTGAC 59.480 55.000 0.00 0.00 36.80 3.67
6885 10700 1.364626 CGTGCCATCTGGAGAACTGC 61.365 60.000 0.00 0.00 37.39 4.40
6894 10709 2.300152 TCTGGAGAACTGCGAGATTTGT 59.700 45.455 0.00 0.00 0.00 2.83
6974 11029 2.504367 ACAAGTACCAACAGACATGCC 58.496 47.619 0.00 0.00 0.00 4.40
6975 11030 1.812571 CAAGTACCAACAGACATGCCC 59.187 52.381 0.00 0.00 0.00 5.36
6976 11031 1.064003 AGTACCAACAGACATGCCCA 58.936 50.000 0.00 0.00 0.00 5.36
6977 11032 1.635487 AGTACCAACAGACATGCCCAT 59.365 47.619 0.00 0.00 0.00 4.00
6978 11033 2.041620 AGTACCAACAGACATGCCCATT 59.958 45.455 0.00 0.00 0.00 3.16
6979 11034 2.897271 ACCAACAGACATGCCCATTA 57.103 45.000 0.00 0.00 0.00 1.90
6980 11035 2.446435 ACCAACAGACATGCCCATTAC 58.554 47.619 0.00 0.00 0.00 1.89
6981 11036 1.750778 CCAACAGACATGCCCATTACC 59.249 52.381 0.00 0.00 0.00 2.85
6982 11037 2.621407 CCAACAGACATGCCCATTACCT 60.621 50.000 0.00 0.00 0.00 3.08
6983 11038 3.091545 CAACAGACATGCCCATTACCTT 58.908 45.455 0.00 0.00 0.00 3.50
6984 11039 3.456380 ACAGACATGCCCATTACCTTT 57.544 42.857 0.00 0.00 0.00 3.11
6985 11040 3.091545 ACAGACATGCCCATTACCTTTG 58.908 45.455 0.00 0.00 0.00 2.77
6986 11041 2.428171 CAGACATGCCCATTACCTTTGG 59.572 50.000 0.00 0.00 0.00 3.28
6987 11042 1.136891 GACATGCCCATTACCTTTGGC 59.863 52.381 0.00 0.00 44.27 4.52
6989 11044 3.206374 GCCCATTACCTTTGGCGG 58.794 61.111 0.00 0.00 33.59 6.13
6990 11045 3.076258 GCCCATTACCTTTGGCGGC 62.076 63.158 0.00 0.00 33.59 6.53
6991 11046 2.770589 CCCATTACCTTTGGCGGCG 61.771 63.158 0.51 0.51 32.60 6.46
6992 11047 2.102161 CATTACCTTTGGCGGCGC 59.898 61.111 26.17 26.17 0.00 6.53
6993 11048 2.360600 ATTACCTTTGGCGGCGCA 60.361 55.556 34.36 17.03 0.00 6.09
6994 11049 1.974343 ATTACCTTTGGCGGCGCAA 60.974 52.632 34.36 22.17 0.00 4.85
6995 11050 1.933115 ATTACCTTTGGCGGCGCAAG 61.933 55.000 34.36 26.88 43.44 4.01
6998 11053 3.669344 CTTTGGCGGCGCAAGGAA 61.669 61.111 34.36 19.29 38.28 3.36
6999 11054 2.988684 TTTGGCGGCGCAAGGAAT 60.989 55.556 34.36 0.00 38.28 3.01
7000 11055 3.279974 TTTGGCGGCGCAAGGAATG 62.280 57.895 34.36 0.00 38.28 2.67
7001 11056 4.713735 TGGCGGCGCAAGGAATGA 62.714 61.111 34.36 3.10 38.28 2.57
7002 11057 3.211963 GGCGGCGCAAGGAATGAT 61.212 61.111 34.36 0.00 38.28 2.45
7003 11058 2.329339 GCGGCGCAAGGAATGATC 59.671 61.111 29.21 0.00 38.28 2.92
7004 11059 2.182842 GCGGCGCAAGGAATGATCT 61.183 57.895 29.21 0.00 38.28 2.75
7005 11060 1.937391 CGGCGCAAGGAATGATCTC 59.063 57.895 10.83 0.00 38.28 2.75
7006 11061 1.502163 CGGCGCAAGGAATGATCTCC 61.502 60.000 10.83 0.00 35.51 3.71
7007 11062 0.464373 GGCGCAAGGAATGATCTCCA 60.464 55.000 10.83 0.00 38.02 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.450312 GCATCTGAACCTCCGTGGG 60.450 63.158 0.00 0.00 41.11 4.61
141 142 1.296832 TGGAGGAGGATGGGGTTCATA 59.703 52.381 0.00 0.00 35.97 2.15
162 179 4.308458 TGTGGGACCTCAACGGCG 62.308 66.667 4.80 4.80 35.61 6.46
213 230 1.962144 CTGTCGTCCACGGTAGGTT 59.038 57.895 0.00 0.00 40.29 3.50
221 238 2.152699 CATCGTCGCTGTCGTCCAC 61.153 63.158 0.00 0.00 36.96 4.02
261 278 1.040893 TCGTGGTGAGGAGTGTGTGT 61.041 55.000 0.00 0.00 0.00 3.72
364 381 1.305381 CTCACGTCCCCCTCTCCTT 60.305 63.158 0.00 0.00 0.00 3.36
487 504 2.890847 AATCCGCTTCCTCTCACGCG 62.891 60.000 3.53 3.53 44.69 6.01
488 505 1.153549 AATCCGCTTCCTCTCACGC 60.154 57.895 0.00 0.00 0.00 5.34
489 506 0.807667 CCAATCCGCTTCCTCTCACG 60.808 60.000 0.00 0.00 0.00 4.35
490 507 0.462759 CCCAATCCGCTTCCTCTCAC 60.463 60.000 0.00 0.00 0.00 3.51
491 508 1.626356 CCCCAATCCGCTTCCTCTCA 61.626 60.000 0.00 0.00 0.00 3.27
492 509 1.147153 CCCCAATCCGCTTCCTCTC 59.853 63.158 0.00 0.00 0.00 3.20
493 510 1.306997 TCCCCAATCCGCTTCCTCT 60.307 57.895 0.00 0.00 0.00 3.69
494 511 1.153147 GTCCCCAATCCGCTTCCTC 60.153 63.158 0.00 0.00 0.00 3.71
495 512 1.915078 CTGTCCCCAATCCGCTTCCT 61.915 60.000 0.00 0.00 0.00 3.36
496 513 1.452108 CTGTCCCCAATCCGCTTCC 60.452 63.158 0.00 0.00 0.00 3.46
497 514 1.452108 CCTGTCCCCAATCCGCTTC 60.452 63.158 0.00 0.00 0.00 3.86
498 515 1.915078 CTCCTGTCCCCAATCCGCTT 61.915 60.000 0.00 0.00 0.00 4.68
499 516 2.285368 TCCTGTCCCCAATCCGCT 60.285 61.111 0.00 0.00 0.00 5.52
500 517 2.190578 CTCCTGTCCCCAATCCGC 59.809 66.667 0.00 0.00 0.00 5.54
501 518 1.690219 CCTCTCCTGTCCCCAATCCG 61.690 65.000 0.00 0.00 0.00 4.18
502 519 0.326618 TCCTCTCCTGTCCCCAATCC 60.327 60.000 0.00 0.00 0.00 3.01
503 520 1.488393 CTTCCTCTCCTGTCCCCAATC 59.512 57.143 0.00 0.00 0.00 2.67
504 521 1.589414 CTTCCTCTCCTGTCCCCAAT 58.411 55.000 0.00 0.00 0.00 3.16
505 522 1.201429 GCTTCCTCTCCTGTCCCCAA 61.201 60.000 0.00 0.00 0.00 4.12
506 523 1.613630 GCTTCCTCTCCTGTCCCCA 60.614 63.158 0.00 0.00 0.00 4.96
507 524 2.726351 CGCTTCCTCTCCTGTCCCC 61.726 68.421 0.00 0.00 0.00 4.81
508 525 2.726351 CCGCTTCCTCTCCTGTCCC 61.726 68.421 0.00 0.00 0.00 4.46
509 526 1.045911 ATCCGCTTCCTCTCCTGTCC 61.046 60.000 0.00 0.00 0.00 4.02
510 527 0.827368 AATCCGCTTCCTCTCCTGTC 59.173 55.000 0.00 0.00 0.00 3.51
511 528 0.539051 CAATCCGCTTCCTCTCCTGT 59.461 55.000 0.00 0.00 0.00 4.00
512 529 0.179062 CCAATCCGCTTCCTCTCCTG 60.179 60.000 0.00 0.00 0.00 3.86
513 530 1.341156 CCCAATCCGCTTCCTCTCCT 61.341 60.000 0.00 0.00 0.00 3.69
514 531 1.147153 CCCAATCCGCTTCCTCTCC 59.853 63.158 0.00 0.00 0.00 3.71
515 532 1.147153 CCCCAATCCGCTTCCTCTC 59.853 63.158 0.00 0.00 0.00 3.20
516 533 1.306997 TCCCCAATCCGCTTCCTCT 60.307 57.895 0.00 0.00 0.00 3.69
517 534 1.147153 CTCCCCAATCCGCTTCCTC 59.853 63.158 0.00 0.00 0.00 3.71
518 535 0.914417 TTCTCCCCAATCCGCTTCCT 60.914 55.000 0.00 0.00 0.00 3.36
519 536 0.034477 TTTCTCCCCAATCCGCTTCC 60.034 55.000 0.00 0.00 0.00 3.46
520 537 1.095600 GTTTCTCCCCAATCCGCTTC 58.904 55.000 0.00 0.00 0.00 3.86
521 538 0.323451 GGTTTCTCCCCAATCCGCTT 60.323 55.000 0.00 0.00 0.00 4.68
522 539 1.303282 GGTTTCTCCCCAATCCGCT 59.697 57.895 0.00 0.00 0.00 5.52
523 540 3.920031 GGTTTCTCCCCAATCCGC 58.080 61.111 0.00 0.00 0.00 5.54
532 549 1.025113 GCTAACGCCAGGGTTTCTCC 61.025 60.000 5.36 0.00 0.00 3.71
533 550 2.467962 GCTAACGCCAGGGTTTCTC 58.532 57.895 5.36 0.00 0.00 2.87
534 551 4.716003 GCTAACGCCAGGGTTTCT 57.284 55.556 5.36 0.00 0.00 2.52
544 561 2.931969 ACGTGGTATAAAAGGCTAACGC 59.068 45.455 0.00 0.00 33.31 4.84
545 562 5.230726 CACTACGTGGTATAAAAGGCTAACG 59.769 44.000 3.52 0.00 35.98 3.18
546 563 6.332630 TCACTACGTGGTATAAAAGGCTAAC 58.667 40.000 3.52 0.00 33.87 2.34
547 564 6.528537 TCACTACGTGGTATAAAAGGCTAA 57.471 37.500 3.52 0.00 33.87 3.09
548 565 6.528537 TTCACTACGTGGTATAAAAGGCTA 57.471 37.500 3.52 0.00 33.87 3.93
549 566 5.410355 TTCACTACGTGGTATAAAAGGCT 57.590 39.130 3.52 0.00 33.87 4.58
550 567 6.673154 ATTTCACTACGTGGTATAAAAGGC 57.327 37.500 3.52 0.00 33.87 4.35
551 568 7.464977 CGGAATTTCACTACGTGGTATAAAAGG 60.465 40.741 3.52 0.00 33.87 3.11
552 569 7.276218 TCGGAATTTCACTACGTGGTATAAAAG 59.724 37.037 3.52 3.44 33.87 2.27
553 570 7.095910 TCGGAATTTCACTACGTGGTATAAAA 58.904 34.615 3.52 6.57 33.87 1.52
554 571 6.629128 TCGGAATTTCACTACGTGGTATAAA 58.371 36.000 3.52 9.06 33.87 1.40
555 572 6.206395 TCGGAATTTCACTACGTGGTATAA 57.794 37.500 3.52 2.29 33.87 0.98
556 573 5.833406 TCGGAATTTCACTACGTGGTATA 57.167 39.130 3.52 0.00 33.87 1.47
557 574 4.724074 TCGGAATTTCACTACGTGGTAT 57.276 40.909 3.52 0.00 33.87 2.73
558 575 4.517952 TTCGGAATTTCACTACGTGGTA 57.482 40.909 3.52 0.00 33.87 3.25
559 576 3.389925 TTCGGAATTTCACTACGTGGT 57.610 42.857 0.00 0.00 33.87 4.16
560 577 4.735662 TTTTCGGAATTTCACTACGTGG 57.264 40.909 0.00 0.00 33.87 4.94
561 578 4.553429 GCATTTTCGGAATTTCACTACGTG 59.447 41.667 0.00 0.00 34.45 4.49
562 579 4.379082 GGCATTTTCGGAATTTCACTACGT 60.379 41.667 0.00 0.00 0.00 3.57
563 580 4.095610 GGCATTTTCGGAATTTCACTACG 58.904 43.478 0.00 0.00 0.00 3.51
564 581 4.157840 AGGGCATTTTCGGAATTTCACTAC 59.842 41.667 0.00 0.00 0.00 2.73
565 582 4.340617 AGGGCATTTTCGGAATTTCACTA 58.659 39.130 0.00 0.00 0.00 2.74
566 583 3.165071 AGGGCATTTTCGGAATTTCACT 58.835 40.909 0.00 0.00 0.00 3.41
567 584 3.511699 GAGGGCATTTTCGGAATTTCAC 58.488 45.455 0.00 0.00 0.00 3.18
568 585 2.163412 CGAGGGCATTTTCGGAATTTCA 59.837 45.455 0.00 0.00 33.39 2.69
569 586 2.797491 CGAGGGCATTTTCGGAATTTC 58.203 47.619 0.00 0.00 33.39 2.17
570 587 2.939460 CGAGGGCATTTTCGGAATTT 57.061 45.000 0.00 0.00 33.39 1.82
576 593 3.187058 CCACCGAGGGCATTTTCG 58.813 61.111 0.00 0.00 36.62 3.46
585 602 1.910580 AATACAGCACCCCACCGAGG 61.911 60.000 0.00 0.00 37.03 4.63
586 603 0.828022 TAATACAGCACCCCACCGAG 59.172 55.000 0.00 0.00 0.00 4.63
587 604 1.065998 GTTAATACAGCACCCCACCGA 60.066 52.381 0.00 0.00 0.00 4.69
588 605 1.339247 TGTTAATACAGCACCCCACCG 60.339 52.381 0.00 0.00 0.00 4.94
589 606 2.365582 CTGTTAATACAGCACCCCACC 58.634 52.381 0.00 0.00 44.81 4.61
599 616 2.432444 GTGCCACTGCCTGTTAATACA 58.568 47.619 0.00 0.00 36.33 2.29
600 617 1.396996 CGTGCCACTGCCTGTTAATAC 59.603 52.381 0.00 0.00 36.33 1.89
601 618 1.276705 TCGTGCCACTGCCTGTTAATA 59.723 47.619 0.00 0.00 36.33 0.98
602 619 0.036164 TCGTGCCACTGCCTGTTAAT 59.964 50.000 0.00 0.00 36.33 1.40
603 620 0.602638 CTCGTGCCACTGCCTGTTAA 60.603 55.000 0.00 0.00 36.33 2.01
604 621 1.005037 CTCGTGCCACTGCCTGTTA 60.005 57.895 0.00 0.00 36.33 2.41
605 622 2.116983 ATCTCGTGCCACTGCCTGTT 62.117 55.000 0.00 0.00 36.33 3.16
606 623 2.513026 GATCTCGTGCCACTGCCTGT 62.513 60.000 0.00 0.00 36.33 4.00
607 624 1.812922 GATCTCGTGCCACTGCCTG 60.813 63.158 0.00 0.00 36.33 4.85
608 625 1.548357 AAGATCTCGTGCCACTGCCT 61.548 55.000 0.00 0.00 36.33 4.75
609 626 0.674895 AAAGATCTCGTGCCACTGCC 60.675 55.000 0.00 0.00 36.33 4.85
610 627 2.010145 TAAAGATCTCGTGCCACTGC 57.990 50.000 0.00 0.00 38.26 4.40
611 628 3.242543 GCAATAAAGATCTCGTGCCACTG 60.243 47.826 0.00 0.00 0.00 3.66
612 629 2.939103 GCAATAAAGATCTCGTGCCACT 59.061 45.455 0.00 0.00 0.00 4.00
613 630 2.285834 CGCAATAAAGATCTCGTGCCAC 60.286 50.000 0.00 0.00 0.00 5.01
614 631 1.933181 CGCAATAAAGATCTCGTGCCA 59.067 47.619 0.00 0.00 0.00 4.92
615 632 1.261619 CCGCAATAAAGATCTCGTGCC 59.738 52.381 0.00 0.00 0.00 5.01
616 633 1.261619 CCCGCAATAAAGATCTCGTGC 59.738 52.381 0.00 2.82 0.00 5.34
617 634 1.261619 GCCCGCAATAAAGATCTCGTG 59.738 52.381 0.00 0.00 0.00 4.35
618 635 1.139058 AGCCCGCAATAAAGATCTCGT 59.861 47.619 0.00 0.00 0.00 4.18
619 636 1.871080 AGCCCGCAATAAAGATCTCG 58.129 50.000 0.00 0.00 0.00 4.04
620 637 3.206150 TGAAGCCCGCAATAAAGATCTC 58.794 45.455 0.00 0.00 0.00 2.75
621 638 3.281727 TGAAGCCCGCAATAAAGATCT 57.718 42.857 0.00 0.00 0.00 2.75
622 639 4.293415 CAATGAAGCCCGCAATAAAGATC 58.707 43.478 0.00 0.00 0.00 2.75
623 640 3.491447 GCAATGAAGCCCGCAATAAAGAT 60.491 43.478 0.00 0.00 0.00 2.40
624 641 2.159254 GCAATGAAGCCCGCAATAAAGA 60.159 45.455 0.00 0.00 0.00 2.52
625 642 2.159198 AGCAATGAAGCCCGCAATAAAG 60.159 45.455 0.00 0.00 34.23 1.85
626 643 1.824230 AGCAATGAAGCCCGCAATAAA 59.176 42.857 0.00 0.00 34.23 1.40
627 644 1.473258 AGCAATGAAGCCCGCAATAA 58.527 45.000 0.00 0.00 34.23 1.40
628 645 1.946768 GTAGCAATGAAGCCCGCAATA 59.053 47.619 0.00 0.00 34.23 1.90
629 646 0.740737 GTAGCAATGAAGCCCGCAAT 59.259 50.000 0.00 0.00 34.23 3.56
630 647 0.607762 TGTAGCAATGAAGCCCGCAA 60.608 50.000 0.00 0.00 34.23 4.85
631 648 1.002746 TGTAGCAATGAAGCCCGCA 60.003 52.632 0.00 0.00 34.23 5.69
632 649 1.718757 CCTGTAGCAATGAAGCCCGC 61.719 60.000 0.00 0.00 34.23 6.13
633 650 1.718757 GCCTGTAGCAATGAAGCCCG 61.719 60.000 0.00 0.00 42.97 6.13
634 651 1.718757 CGCCTGTAGCAATGAAGCCC 61.719 60.000 0.00 0.00 44.04 5.19
635 652 1.723870 CGCCTGTAGCAATGAAGCC 59.276 57.895 0.00 0.00 44.04 4.35
636 653 1.063166 GCGCCTGTAGCAATGAAGC 59.937 57.895 0.00 0.00 44.04 3.86
637 654 1.349627 CGCGCCTGTAGCAATGAAG 59.650 57.895 0.00 0.00 44.04 3.02
638 655 2.749865 GCGCGCCTGTAGCAATGAA 61.750 57.895 23.24 0.00 44.04 2.57
639 656 3.195002 GCGCGCCTGTAGCAATGA 61.195 61.111 23.24 0.00 44.04 2.57
640 657 3.197790 AGCGCGCCTGTAGCAATG 61.198 61.111 30.33 0.00 44.04 2.82
641 658 3.197790 CAGCGCGCCTGTAGCAAT 61.198 61.111 30.33 1.73 44.04 3.56
661 678 3.515286 GTCTGGCCGTCGGATCGA 61.515 66.667 17.49 3.99 32.64 3.59
662 679 3.471244 GAGTCTGGCCGTCGGATCG 62.471 68.421 17.49 1.30 32.64 3.69
663 680 2.413765 GAGTCTGGCCGTCGGATC 59.586 66.667 17.49 6.79 32.64 3.36
664 681 3.518998 CGAGTCTGGCCGTCGGAT 61.519 66.667 17.49 0.00 32.64 4.18
665 682 3.989838 ATCGAGTCTGGCCGTCGGA 62.990 63.158 17.49 0.00 34.43 4.55
666 683 2.558554 AAATCGAGTCTGGCCGTCGG 62.559 60.000 6.99 6.99 34.43 4.79
667 684 0.099968 TAAATCGAGTCTGGCCGTCG 59.900 55.000 9.63 9.63 34.98 5.12
668 685 1.925185 GTTAAATCGAGTCTGGCCGTC 59.075 52.381 0.00 0.00 0.00 4.79
669 686 1.734707 CGTTAAATCGAGTCTGGCCGT 60.735 52.381 0.00 0.00 0.00 5.68
670 687 0.921347 CGTTAAATCGAGTCTGGCCG 59.079 55.000 0.00 0.00 0.00 6.13
671 688 1.134907 TCCGTTAAATCGAGTCTGGCC 60.135 52.381 0.00 0.00 0.00 5.36
672 689 1.925185 GTCCGTTAAATCGAGTCTGGC 59.075 52.381 0.00 0.00 0.00 4.85
673 690 3.119602 TCTGTCCGTTAAATCGAGTCTGG 60.120 47.826 0.00 0.00 0.00 3.86
674 691 4.092771 TCTGTCCGTTAAATCGAGTCTG 57.907 45.455 0.00 0.00 0.00 3.51
675 692 4.778534 TTCTGTCCGTTAAATCGAGTCT 57.221 40.909 0.00 0.00 0.00 3.24
676 693 5.724223 GCATTTCTGTCCGTTAAATCGAGTC 60.724 44.000 0.00 0.00 0.00 3.36
677 694 4.092968 GCATTTCTGTCCGTTAAATCGAGT 59.907 41.667 0.00 0.00 0.00 4.18
678 695 4.092821 TGCATTTCTGTCCGTTAAATCGAG 59.907 41.667 0.00 0.00 0.00 4.04
679 696 3.997681 TGCATTTCTGTCCGTTAAATCGA 59.002 39.130 0.00 0.00 0.00 3.59
680 697 4.335082 TGCATTTCTGTCCGTTAAATCG 57.665 40.909 0.00 0.00 0.00 3.34
681 698 5.879237 TGATGCATTTCTGTCCGTTAAATC 58.121 37.500 0.00 0.00 0.00 2.17
682 699 5.895636 TGATGCATTTCTGTCCGTTAAAT 57.104 34.783 0.00 0.00 0.00 1.40
683 700 5.697473 TTGATGCATTTCTGTCCGTTAAA 57.303 34.783 0.00 0.00 0.00 1.52
684 701 4.379394 GCTTGATGCATTTCTGTCCGTTAA 60.379 41.667 0.00 0.00 42.31 2.01
685 702 3.126858 GCTTGATGCATTTCTGTCCGTTA 59.873 43.478 0.00 0.00 42.31 3.18
686 703 2.095059 GCTTGATGCATTTCTGTCCGTT 60.095 45.455 0.00 0.00 42.31 4.44
687 704 1.470098 GCTTGATGCATTTCTGTCCGT 59.530 47.619 0.00 0.00 42.31 4.69
688 705 2.184385 GCTTGATGCATTTCTGTCCG 57.816 50.000 0.00 0.00 42.31 4.79
699 716 3.181550 CGTTCGATTTGTTTGCTTGATGC 60.182 43.478 0.00 0.00 43.25 3.91
700 717 3.361644 CCGTTCGATTTGTTTGCTTGATG 59.638 43.478 0.00 0.00 0.00 3.07
701 718 3.564511 CCGTTCGATTTGTTTGCTTGAT 58.435 40.909 0.00 0.00 0.00 2.57
702 719 2.856720 GCCGTTCGATTTGTTTGCTTGA 60.857 45.455 0.00 0.00 0.00 3.02
703 720 1.451651 GCCGTTCGATTTGTTTGCTTG 59.548 47.619 0.00 0.00 0.00 4.01
704 721 1.601914 GGCCGTTCGATTTGTTTGCTT 60.602 47.619 0.00 0.00 0.00 3.91
705 722 0.039527 GGCCGTTCGATTTGTTTGCT 60.040 50.000 0.00 0.00 0.00 3.91
706 723 0.318275 TGGCCGTTCGATTTGTTTGC 60.318 50.000 0.00 0.00 0.00 3.68
707 724 1.265635 TCTGGCCGTTCGATTTGTTTG 59.734 47.619 0.00 0.00 0.00 2.93
708 725 1.600023 TCTGGCCGTTCGATTTGTTT 58.400 45.000 0.00 0.00 0.00 2.83
709 726 1.600023 TTCTGGCCGTTCGATTTGTT 58.400 45.000 0.00 0.00 0.00 2.83
710 727 1.468520 CATTCTGGCCGTTCGATTTGT 59.531 47.619 0.00 0.00 0.00 2.83
711 728 1.795162 GCATTCTGGCCGTTCGATTTG 60.795 52.381 0.00 0.00 0.00 2.32
712 729 0.451783 GCATTCTGGCCGTTCGATTT 59.548 50.000 0.00 0.00 0.00 2.17
713 730 0.392998 AGCATTCTGGCCGTTCGATT 60.393 50.000 0.00 0.00 0.00 3.34
714 731 0.811616 GAGCATTCTGGCCGTTCGAT 60.812 55.000 0.00 0.00 0.00 3.59
715 732 1.447838 GAGCATTCTGGCCGTTCGA 60.448 57.895 0.00 0.00 0.00 3.71
716 733 1.448540 AGAGCATTCTGGCCGTTCG 60.449 57.895 0.00 0.00 30.72 3.95
717 734 2.093216 CAGAGCATTCTGGCCGTTC 58.907 57.895 0.00 0.00 45.79 3.95
718 735 4.308526 CAGAGCATTCTGGCCGTT 57.691 55.556 0.00 0.00 45.79 4.44
725 742 4.081531 CCTTCTCAGAGTTCAGAGCATTCT 60.082 45.833 0.00 0.00 30.63 2.40
726 743 4.183101 CCTTCTCAGAGTTCAGAGCATTC 58.817 47.826 0.00 0.00 30.63 2.67
727 744 3.619487 GCCTTCTCAGAGTTCAGAGCATT 60.619 47.826 0.00 0.00 30.63 3.56
728 745 2.093553 GCCTTCTCAGAGTTCAGAGCAT 60.094 50.000 0.00 0.00 30.63 3.79
729 746 1.274728 GCCTTCTCAGAGTTCAGAGCA 59.725 52.381 0.00 0.00 30.63 4.26
730 747 1.550072 AGCCTTCTCAGAGTTCAGAGC 59.450 52.381 0.00 0.00 30.63 4.09
731 748 2.159393 CGAGCCTTCTCAGAGTTCAGAG 60.159 54.545 0.00 0.00 39.30 3.35
732 749 1.815613 CGAGCCTTCTCAGAGTTCAGA 59.184 52.381 0.00 0.00 39.30 3.27
733 750 1.135141 CCGAGCCTTCTCAGAGTTCAG 60.135 57.143 0.00 0.00 39.30 3.02
734 751 0.891373 CCGAGCCTTCTCAGAGTTCA 59.109 55.000 0.00 0.00 39.30 3.18
735 752 0.174617 CCCGAGCCTTCTCAGAGTTC 59.825 60.000 0.00 0.00 39.30 3.01
736 753 0.251832 TCCCGAGCCTTCTCAGAGTT 60.252 55.000 0.00 0.00 39.30 3.01
737 754 0.682855 CTCCCGAGCCTTCTCAGAGT 60.683 60.000 0.00 0.00 39.30 3.24
738 755 0.682855 ACTCCCGAGCCTTCTCAGAG 60.683 60.000 0.00 0.00 41.54 3.35
739 756 0.967887 CACTCCCGAGCCTTCTCAGA 60.968 60.000 0.00 0.00 39.30 3.27
740 757 1.515020 CACTCCCGAGCCTTCTCAG 59.485 63.158 0.00 0.00 39.30 3.35
741 758 2.650116 GCACTCCCGAGCCTTCTCA 61.650 63.158 0.00 0.00 39.30 3.27
742 759 2.185608 GCACTCCCGAGCCTTCTC 59.814 66.667 0.00 0.00 35.99 2.87
756 773 5.352284 TCGAGAAATAAGAGATTGAGGCAC 58.648 41.667 0.00 0.00 0.00 5.01
757 774 5.598416 TCGAGAAATAAGAGATTGAGGCA 57.402 39.130 0.00 0.00 0.00 4.75
758 775 5.988561 ACATCGAGAAATAAGAGATTGAGGC 59.011 40.000 0.00 0.00 0.00 4.70
759 776 9.138062 CATACATCGAGAAATAAGAGATTGAGG 57.862 37.037 0.00 0.00 0.00 3.86
760 777 9.689976 ACATACATCGAGAAATAAGAGATTGAG 57.310 33.333 0.00 0.00 0.00 3.02
761 778 9.468532 CACATACATCGAGAAATAAGAGATTGA 57.531 33.333 0.00 0.00 0.00 2.57
762 779 9.254133 ACACATACATCGAGAAATAAGAGATTG 57.746 33.333 0.00 0.00 0.00 2.67
763 780 9.254133 CACACATACATCGAGAAATAAGAGATT 57.746 33.333 0.00 0.00 0.00 2.40
764 781 8.417106 ACACACATACATCGAGAAATAAGAGAT 58.583 33.333 0.00 0.00 0.00 2.75
765 782 7.702348 CACACACATACATCGAGAAATAAGAGA 59.298 37.037 0.00 0.00 0.00 3.10
766 783 7.489435 ACACACACATACATCGAGAAATAAGAG 59.511 37.037 0.00 0.00 0.00 2.85
767 784 7.320399 ACACACACATACATCGAGAAATAAGA 58.680 34.615 0.00 0.00 0.00 2.10
768 785 7.525688 ACACACACATACATCGAGAAATAAG 57.474 36.000 0.00 0.00 0.00 1.73
769 786 7.899178 AACACACACATACATCGAGAAATAA 57.101 32.000 0.00 0.00 0.00 1.40
770 787 8.989653 TTAACACACACATACATCGAGAAATA 57.010 30.769 0.00 0.00 0.00 1.40
771 788 7.899178 TTAACACACACATACATCGAGAAAT 57.101 32.000 0.00 0.00 0.00 2.17
772 789 7.716768 TTTAACACACACATACATCGAGAAA 57.283 32.000 0.00 0.00 0.00 2.52
773 790 7.716768 TTTTAACACACACATACATCGAGAA 57.283 32.000 0.00 0.00 0.00 2.87
774 791 7.567952 CGTTTTTAACACACACATACATCGAGA 60.568 37.037 0.00 0.00 0.00 4.04
775 792 6.515002 CGTTTTTAACACACACATACATCGAG 59.485 38.462 0.00 0.00 0.00 4.04
776 793 6.356417 CGTTTTTAACACACACATACATCGA 58.644 36.000 0.00 0.00 0.00 3.59
777 794 5.562248 CCGTTTTTAACACACACATACATCG 59.438 40.000 0.00 0.00 0.00 3.84
778 795 6.660722 TCCGTTTTTAACACACACATACATC 58.339 36.000 0.00 0.00 0.00 3.06
779 796 6.621316 TCCGTTTTTAACACACACATACAT 57.379 33.333 0.00 0.00 0.00 2.29
780 797 6.432607 TTCCGTTTTTAACACACACATACA 57.567 33.333 0.00 0.00 0.00 2.29
788 805 3.512724 TGGGGTTTTCCGTTTTTAACACA 59.487 39.130 0.00 0.00 41.82 3.72
799 816 2.738314 CGTAAGTAAGTGGGGTTTTCCG 59.262 50.000 0.00 0.00 41.82 4.30
815 832 1.595357 GGTGGGACCTGGTCGTAAG 59.405 63.158 19.98 0.00 34.73 2.34
914 931 1.228862 GCTGGGGCAAAGGGAAAGA 60.229 57.895 0.00 0.00 38.54 2.52
1191 1217 3.056607 GGTAGTTGTAGTAGCCGTTGGAA 60.057 47.826 0.00 0.00 0.00 3.53
1566 3901 6.210185 CCCCCAAAATCAGGAAATCTCATATC 59.790 42.308 0.00 0.00 0.00 1.63
1676 4015 5.815581 ACAAAATACTAGCATCAGGAACCA 58.184 37.500 0.00 0.00 0.00 3.67
1739 4116 8.202137 TCTCCAAAGACTTATATTTAGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
1771 4148 3.066342 CACCGTATGTAGTCCACCTAGTG 59.934 52.174 0.00 0.00 0.00 2.74
1772 4149 3.285484 CACCGTATGTAGTCCACCTAGT 58.715 50.000 0.00 0.00 0.00 2.57
1773 4150 2.034305 GCACCGTATGTAGTCCACCTAG 59.966 54.545 0.00 0.00 0.00 3.02
1774 4151 2.026641 GCACCGTATGTAGTCCACCTA 58.973 52.381 0.00 0.00 0.00 3.08
1775 4152 0.822164 GCACCGTATGTAGTCCACCT 59.178 55.000 0.00 0.00 0.00 4.00
1777 4154 2.373540 TTGCACCGTATGTAGTCCAC 57.626 50.000 0.00 0.00 0.00 4.02
1778 4155 3.404224 TTTTGCACCGTATGTAGTCCA 57.596 42.857 0.00 0.00 0.00 4.02
1779 4156 3.936453 TCATTTTGCACCGTATGTAGTCC 59.064 43.478 0.00 0.00 0.00 3.85
1780 4157 5.539582 TTCATTTTGCACCGTATGTAGTC 57.460 39.130 0.00 0.00 0.00 2.59
1781 4158 5.645929 TCATTCATTTTGCACCGTATGTAGT 59.354 36.000 0.00 0.00 0.00 2.73
1782 4159 6.117911 TCATTCATTTTGCACCGTATGTAG 57.882 37.500 0.00 0.00 0.00 2.74
1783 4160 6.502136 TTCATTCATTTTGCACCGTATGTA 57.498 33.333 0.00 0.00 0.00 2.29
1784 4161 5.384063 TTCATTCATTTTGCACCGTATGT 57.616 34.783 0.00 0.00 0.00 2.29
1785 4162 6.267817 AGATTCATTCATTTTGCACCGTATG 58.732 36.000 0.00 0.00 0.00 2.39
1786 4163 6.455360 AGATTCATTCATTTTGCACCGTAT 57.545 33.333 0.00 0.00 0.00 3.06
1788 4165 4.789012 AGATTCATTCATTTTGCACCGT 57.211 36.364 0.00 0.00 0.00 4.83
1789 4166 5.512788 GTGTAGATTCATTCATTTTGCACCG 59.487 40.000 0.00 0.00 0.00 4.94
1791 4168 9.624697 TTAAGTGTAGATTCATTCATTTTGCAC 57.375 29.630 0.00 0.00 0.00 4.57
1812 4189 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
1816 4193 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
1817 4194 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
1818 4195 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
1819 4196 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
1820 4197 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
1821 4198 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
1828 4205 9.299465 TCACTATAAACCACATACGGATGTATA 57.701 33.333 14.23 6.48 44.82 1.47
1829 4206 8.185506 TCACTATAAACCACATACGGATGTAT 57.814 34.615 14.23 5.54 44.82 2.29
1830 4207 7.585579 TCACTATAAACCACATACGGATGTA 57.414 36.000 14.23 0.00 44.82 2.29
1832 4209 7.780008 TTTCACTATAAACCACATACGGATG 57.220 36.000 5.94 5.94 39.16 3.51
1833 4210 8.044908 AGTTTTCACTATAAACCACATACGGAT 58.955 33.333 0.00 0.00 36.40 4.18
1834 4211 7.388437 AGTTTTCACTATAAACCACATACGGA 58.612 34.615 0.00 0.00 36.40 4.69
1835 4212 7.548075 AGAGTTTTCACTATAAACCACATACGG 59.452 37.037 0.00 0.00 36.40 4.02
1836 4213 8.475331 AGAGTTTTCACTATAAACCACATACG 57.525 34.615 0.00 0.00 36.40 3.06
1839 4216 9.787435 TTGTAGAGTTTTCACTATAAACCACAT 57.213 29.630 0.00 0.00 36.40 3.21
1840 4217 9.616156 TTTGTAGAGTTTTCACTATAAACCACA 57.384 29.630 0.00 0.00 36.40 4.17
1862 4239 9.379791 CTTCCGTTCCTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
1863 4240 8.827677 CCTTCCGTTCCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
1864 4241 8.765517 TCCTTCCGTTCCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
1865 4242 8.315220 TCCTTCCGTTCCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
1866 4243 7.564292 ACTCCTTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
1867 4244 7.724287 ACTCCTTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
1868 4245 7.672122 ACTCCTTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
1873 4250 9.822185 GTTAATTACTCCTTCCGTTCCTAAATA 57.178 33.333 0.00 0.00 0.00 1.40
1878 4255 5.731591 CAGTTAATTACTCCTTCCGTTCCT 58.268 41.667 0.00 0.00 33.85 3.36
1879 4256 4.331992 GCAGTTAATTACTCCTTCCGTTCC 59.668 45.833 0.00 0.00 33.85 3.62
1881 4258 4.694037 GTGCAGTTAATTACTCCTTCCGTT 59.306 41.667 0.00 0.00 33.85 4.44
1887 4264 4.286032 TGACCAGTGCAGTTAATTACTCCT 59.714 41.667 0.00 0.00 33.85 3.69
1967 4346 3.254060 GGTAGCACTGTCACACACATAG 58.746 50.000 0.00 0.00 33.23 2.23
2225 4622 3.039011 ACGCATGATTACCTTAGGGACT 58.961 45.455 2.32 0.00 46.37 3.85
2587 5046 2.039480 TCCAGTGTAGTCCTACAGTCGT 59.961 50.000 11.04 0.00 45.16 4.34
2922 5406 3.185455 GGATAGGTAGGCATCCCTGAAT 58.815 50.000 0.00 0.00 42.90 2.57
2959 5443 6.857437 TTCTTCAGGACATCTACAAGATCA 57.143 37.500 0.00 0.00 31.32 2.92
3018 5502 3.782889 AATAAACCAAAGAGCGATGGC 57.217 42.857 0.00 0.00 40.51 4.40
3189 5706 2.298163 CCAACTGCTTTCCTCTGCATTT 59.702 45.455 0.00 0.00 38.59 2.32
3704 6499 3.742882 TGATCAAGCTCAAAGAGTTGACG 59.257 43.478 0.00 0.00 38.88 4.35
3727 6522 1.855513 CATGTGTGCAGGGTTTTGTG 58.144 50.000 0.00 0.00 0.00 3.33
3809 6604 0.962356 GCACCCTGCAGCAATAGTGT 60.962 55.000 8.66 0.00 44.26 3.55
3864 6659 4.637534 CAGCCAGCAGAAAAATAGCTCTAA 59.362 41.667 0.00 0.00 36.26 2.10
4336 7564 2.231478 CTGCCGTTCTCTTCTTGACCTA 59.769 50.000 0.00 0.00 0.00 3.08
4503 7731 4.630111 CATCCCTCTGATTAACAGCTCTC 58.370 47.826 0.00 0.00 45.38 3.20
4631 7865 6.200854 CGAGTTTATGCATATGCTACTGTTGA 59.799 38.462 27.13 5.91 42.66 3.18
4680 7924 8.538409 ACATGCAGAACAAAAGAAATTAATCC 57.462 30.769 0.00 0.00 0.00 3.01
4878 8128 2.975489 ACTCCAGTCATCAACAAGAGGT 59.025 45.455 0.00 0.00 34.96 3.85
5079 8547 7.870445 TCAGCCAACCAATAACAAAGAAATTAC 59.130 33.333 0.00 0.00 0.00 1.89
5224 8695 2.969821 TAAAGTGTGGGTGGAATGCT 57.030 45.000 0.00 0.00 0.00 3.79
5228 8699 2.969821 AGCATAAAGTGTGGGTGGAA 57.030 45.000 0.00 0.00 0.00 3.53
5261 8732 4.236935 CAAAATGACATGCTACAACCACC 58.763 43.478 0.00 0.00 0.00 4.61
5495 8966 2.305927 TCACATTCACTCCTCCCCTTTC 59.694 50.000 0.00 0.00 0.00 2.62
5499 8970 2.879103 TTTCACATTCACTCCTCCCC 57.121 50.000 0.00 0.00 0.00 4.81
6011 9584 1.476833 GGACCAAGTTGCTTCACCTCA 60.477 52.381 0.00 0.00 0.00 3.86
6065 9638 5.836024 ACTAACCCTGTGTGAATAGGAAA 57.164 39.130 0.00 0.00 36.11 3.13
6326 10099 6.459923 GGGAAATAGAAGCTCATAGTAGGTG 58.540 44.000 0.00 0.00 0.00 4.00
6327 10100 5.544562 GGGGAAATAGAAGCTCATAGTAGGT 59.455 44.000 0.00 0.00 0.00 3.08
6328 10101 5.544176 TGGGGAAATAGAAGCTCATAGTAGG 59.456 44.000 0.00 0.00 0.00 3.18
6409 10206 1.725641 TCACATGCGGATGTCAGAAC 58.274 50.000 20.57 0.00 41.12 3.01
6410 10207 2.282407 CATCACATGCGGATGTCAGAA 58.718 47.619 20.57 6.50 41.12 3.02
6426 10223 7.170320 CGACATGAATCAGAATGTGATACATCA 59.830 37.037 0.00 0.00 45.89 3.07
6427 10224 7.359849 CCGACATGAATCAGAATGTGATACATC 60.360 40.741 0.00 0.00 45.89 3.06
6428 10225 6.426025 CCGACATGAATCAGAATGTGATACAT 59.574 38.462 0.00 0.00 45.89 2.29
6429 10226 5.754890 CCGACATGAATCAGAATGTGATACA 59.245 40.000 0.00 0.00 45.89 2.29
6430 10227 5.755375 ACCGACATGAATCAGAATGTGATAC 59.245 40.000 0.00 0.00 45.89 2.24
6431 10228 5.917462 ACCGACATGAATCAGAATGTGATA 58.083 37.500 0.00 0.00 45.89 2.15
6433 10230 4.206477 ACCGACATGAATCAGAATGTGA 57.794 40.909 0.00 0.00 37.15 3.58
6434 10231 4.952262 AACCGACATGAATCAGAATGTG 57.048 40.909 0.00 0.00 37.15 3.21
6435 10232 4.093408 CGAAACCGACATGAATCAGAATGT 59.907 41.667 0.00 0.00 39.69 2.71
6436 10233 4.329801 TCGAAACCGACATGAATCAGAATG 59.670 41.667 0.00 0.00 37.54 2.67
6437 10234 4.503910 TCGAAACCGACATGAATCAGAAT 58.496 39.130 0.00 0.00 0.00 2.40
6438 10235 3.920446 TCGAAACCGACATGAATCAGAA 58.080 40.909 0.00 0.00 0.00 3.02
6439 10236 3.586100 TCGAAACCGACATGAATCAGA 57.414 42.857 0.00 0.00 0.00 3.27
6440 10237 4.661993 TTTCGAAACCGACATGAATCAG 57.338 40.909 6.47 0.00 35.58 2.90
6441 10238 5.425577 TTTTTCGAAACCGACATGAATCA 57.574 34.783 10.79 0.00 35.58 2.57
6461 10258 9.603921 AAACACATGAATCAGAATGTTCTTTTT 57.396 25.926 0.00 0.00 34.81 1.94
6462 10259 9.603921 AAAACACATGAATCAGAATGTTCTTTT 57.396 25.926 0.00 3.73 34.81 2.27
6463 10260 9.603921 AAAAACACATGAATCAGAATGTTCTTT 57.396 25.926 0.00 9.06 34.81 2.52
6510 10307 1.464997 CCTACTTCGCAACCAGAAAGC 59.535 52.381 0.00 0.00 0.00 3.51
6511 10308 2.076863 CCCTACTTCGCAACCAGAAAG 58.923 52.381 0.00 0.00 0.00 2.62
6522 10319 4.421948 GTTGTGTCATACTCCCTACTTCG 58.578 47.826 0.00 0.00 0.00 3.79
6596 10405 1.811266 CCCACTTCCGACAGCGATG 60.811 63.158 0.00 0.00 40.82 3.84
6723 10532 2.264005 TGCCATGGTTAACACTTCGT 57.736 45.000 14.67 0.00 0.00 3.85
6724 10533 2.159393 CCATGCCATGGTTAACACTTCG 60.159 50.000 15.89 0.00 45.54 3.79
6791 10604 5.820423 CACGGGAGATGATTATTTGGTTGTA 59.180 40.000 0.00 0.00 0.00 2.41
6852 10666 1.336440 TGGCACGAAACATTCAGGTTG 59.664 47.619 0.00 0.00 0.00 3.77
6885 10700 7.534085 TTGTATAGGCTTACAACAAATCTCG 57.466 36.000 14.25 0.00 37.20 4.04
6894 10709 7.339212 ACTCAATGCATTTGTATAGGCTTACAA 59.661 33.333 9.83 14.25 39.63 2.41
6938 10993 7.383687 TGGTACTTGTAAGGTTCTGATTGTAG 58.616 38.462 0.00 0.00 0.00 2.74
6974 11029 2.798009 CGCCGCCAAAGGTAATGG 59.202 61.111 0.00 0.00 41.08 3.16
6975 11030 2.102161 GCGCCGCCAAAGGTAATG 59.898 61.111 0.00 0.00 0.00 1.90
6976 11031 1.933115 CTTGCGCCGCCAAAGGTAAT 61.933 55.000 6.63 0.00 0.00 1.89
6977 11032 2.594882 TTGCGCCGCCAAAGGTAA 60.595 55.556 6.63 0.00 0.00 2.85
6978 11033 3.053291 CTTGCGCCGCCAAAGGTA 61.053 61.111 6.63 0.00 0.00 3.08
6981 11036 2.993471 ATTCCTTGCGCCGCCAAAG 61.993 57.895 6.63 4.16 0.00 2.77
6982 11037 2.988684 ATTCCTTGCGCCGCCAAA 60.989 55.556 6.63 0.00 0.00 3.28
6983 11038 3.746889 CATTCCTTGCGCCGCCAA 61.747 61.111 6.63 0.00 0.00 4.52
6984 11039 3.993614 ATCATTCCTTGCGCCGCCA 62.994 57.895 6.63 0.00 0.00 5.69
6985 11040 3.186390 GATCATTCCTTGCGCCGCC 62.186 63.158 6.63 0.00 0.00 6.13
6986 11041 2.110734 GAGATCATTCCTTGCGCCGC 62.111 60.000 4.18 0.00 0.00 6.53
6987 11042 1.502163 GGAGATCATTCCTTGCGCCG 61.502 60.000 4.18 0.00 34.27 6.46
6988 11043 0.464373 TGGAGATCATTCCTTGCGCC 60.464 55.000 4.18 0.00 38.12 6.53
6989 11044 3.085208 TGGAGATCATTCCTTGCGC 57.915 52.632 0.00 0.00 38.12 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.