Multiple sequence alignment - TraesCS3D01G203800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G203800 chr3D 100.000 3311 0 0 1 3311 253616511 253619821 0.000000e+00 6115
1 TraesCS3D01G203800 chr3A 97.911 2537 50 3 777 3311 335996427 335993892 0.000000e+00 4388
2 TraesCS3D01G203800 chr3A 87.037 270 24 8 345 610 336047389 336047127 8.990000e-76 294
3 TraesCS3D01G203800 chr3A 95.858 169 4 2 611 779 335996617 335996452 1.510000e-68 270
4 TraesCS3D01G203800 chr3B 93.518 2561 99 25 777 3311 308394437 308391918 0.000000e+00 3747
5 TraesCS3D01G203800 chr3B 92.331 326 22 2 2 325 204278685 204279009 8.370000e-126 460
6 TraesCS3D01G203800 chr3B 85.977 435 19 16 345 772 308404309 308403910 8.490000e-116 427
7 TraesCS3D01G203800 chr6B 91.030 301 24 2 2 300 199936701 199936402 1.430000e-108 403
8 TraesCS3D01G203800 chr7A 85.671 328 39 6 3 325 156136325 156136001 4.090000e-89 339
9 TraesCS3D01G203800 chr4A 85.231 325 38 5 3 322 741081005 741080686 3.190000e-85 326


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G203800 chr3D 253616511 253619821 3310 False 6115 6115 100.0000 1 3311 1 chr3D.!!$F1 3310
1 TraesCS3D01G203800 chr3A 335993892 335996617 2725 True 2329 4388 96.8845 611 3311 2 chr3A.!!$R2 2700
2 TraesCS3D01G203800 chr3B 308391918 308394437 2519 True 3747 3747 93.5180 777 3311 1 chr3B.!!$R1 2534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.026544 GAGGTAAGAGCTCGACGACG 59.973 60.0 8.37 0.0 41.26 5.12 F
337 338 0.114364 GGAAAAAGGCCCTGGGAAGA 59.886 55.0 19.27 0.0 0.00 2.87 F
340 341 0.542938 AAAAGGCCCTGGGAAGAAGC 60.543 55.0 19.27 0.0 0.00 3.86 F
345 346 0.613012 GCCCTGGGAAGAAGCAACAT 60.613 55.0 19.27 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1493 1526 0.663688 CTCCTCCGTGTACATCCTCG 59.336 60.000 0.00 0.00 0.00 4.63 R
1992 2025 1.584380 GAAGCAGCAGGACAGGCAAG 61.584 60.000 0.00 0.00 0.00 4.01 R
2077 2110 4.401519 TCCACGTTGGGTTTGAAATTTGTA 59.598 37.500 0.00 0.00 38.32 2.41 R
2510 2543 3.041701 CCATGTGTGTGCACCCAC 58.958 61.111 23.53 23.53 44.65 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.919971 GCCTAGTTCGGCCATCATC 58.080 57.895 2.24 0.00 44.41 2.92
35 36 0.394565 GCCTAGTTCGGCCATCATCT 59.605 55.000 2.24 0.00 44.41 2.90
36 37 1.202698 GCCTAGTTCGGCCATCATCTT 60.203 52.381 2.24 0.00 44.41 2.40
37 38 2.760374 CCTAGTTCGGCCATCATCTTC 58.240 52.381 2.24 0.00 0.00 2.87
38 39 2.366916 CCTAGTTCGGCCATCATCTTCT 59.633 50.000 2.24 0.00 0.00 2.85
39 40 2.611225 AGTTCGGCCATCATCTTCTC 57.389 50.000 2.24 0.00 0.00 2.87
40 41 1.833630 AGTTCGGCCATCATCTTCTCA 59.166 47.619 2.24 0.00 0.00 3.27
41 42 2.237143 AGTTCGGCCATCATCTTCTCAA 59.763 45.455 2.24 0.00 0.00 3.02
42 43 2.315925 TCGGCCATCATCTTCTCAAC 57.684 50.000 2.24 0.00 0.00 3.18
43 44 1.833630 TCGGCCATCATCTTCTCAACT 59.166 47.619 2.24 0.00 0.00 3.16
44 45 2.237143 TCGGCCATCATCTTCTCAACTT 59.763 45.455 2.24 0.00 0.00 2.66
45 46 2.611292 CGGCCATCATCTTCTCAACTTC 59.389 50.000 2.24 0.00 0.00 3.01
46 47 2.948315 GGCCATCATCTTCTCAACTTCC 59.052 50.000 0.00 0.00 0.00 3.46
47 48 2.611292 GCCATCATCTTCTCAACTTCCG 59.389 50.000 0.00 0.00 0.00 4.30
48 49 3.679917 GCCATCATCTTCTCAACTTCCGA 60.680 47.826 0.00 0.00 0.00 4.55
49 50 4.701765 CCATCATCTTCTCAACTTCCGAT 58.298 43.478 0.00 0.00 0.00 4.18
50 51 4.749099 CCATCATCTTCTCAACTTCCGATC 59.251 45.833 0.00 0.00 0.00 3.69
51 52 4.392921 TCATCTTCTCAACTTCCGATCC 57.607 45.455 0.00 0.00 0.00 3.36
52 53 3.769300 TCATCTTCTCAACTTCCGATCCA 59.231 43.478 0.00 0.00 0.00 3.41
53 54 3.876274 TCTTCTCAACTTCCGATCCAG 57.124 47.619 0.00 0.00 0.00 3.86
54 55 3.431415 TCTTCTCAACTTCCGATCCAGA 58.569 45.455 0.00 0.00 0.00 3.86
55 56 3.445450 TCTTCTCAACTTCCGATCCAGAG 59.555 47.826 0.00 0.00 0.00 3.35
56 57 2.103373 TCTCAACTTCCGATCCAGAGG 58.897 52.381 0.00 0.00 0.00 3.69
57 58 1.827969 CTCAACTTCCGATCCAGAGGT 59.172 52.381 0.00 0.00 0.00 3.85
58 59 1.550524 TCAACTTCCGATCCAGAGGTG 59.449 52.381 0.00 0.00 0.00 4.00
59 60 0.905357 AACTTCCGATCCAGAGGTGG 59.095 55.000 0.00 0.00 46.63 4.61
69 70 3.056628 CAGAGGTGGAACTCGATGC 57.943 57.895 0.00 0.00 42.31 3.91
70 71 0.460987 CAGAGGTGGAACTCGATGCC 60.461 60.000 0.00 0.00 42.31 4.40
71 72 1.153349 GAGGTGGAACTCGATGCCC 60.153 63.158 0.00 0.00 36.74 5.36
72 73 2.124695 GGTGGAACTCGATGCCCC 60.125 66.667 0.00 0.00 36.74 5.80
73 74 2.670148 GGTGGAACTCGATGCCCCT 61.670 63.158 0.00 0.00 36.74 4.79
74 75 1.450312 GTGGAACTCGATGCCCCTG 60.450 63.158 0.00 0.00 0.00 4.45
75 76 1.612146 TGGAACTCGATGCCCCTGA 60.612 57.895 0.00 0.00 0.00 3.86
76 77 1.198094 TGGAACTCGATGCCCCTGAA 61.198 55.000 0.00 0.00 0.00 3.02
77 78 0.462759 GGAACTCGATGCCCCTGAAG 60.463 60.000 0.00 0.00 0.00 3.02
78 79 1.078143 AACTCGATGCCCCTGAAGC 60.078 57.895 0.00 0.00 0.00 3.86
79 80 2.203126 CTCGATGCCCCTGAAGCC 60.203 66.667 0.00 0.00 0.00 4.35
80 81 2.688666 TCGATGCCCCTGAAGCCT 60.689 61.111 0.00 0.00 0.00 4.58
81 82 2.262774 CTCGATGCCCCTGAAGCCTT 62.263 60.000 0.00 0.00 0.00 4.35
82 83 1.821332 CGATGCCCCTGAAGCCTTC 60.821 63.158 0.00 0.00 0.00 3.46
83 84 1.821332 GATGCCCCTGAAGCCTTCG 60.821 63.158 0.00 0.00 0.00 3.79
84 85 2.257409 GATGCCCCTGAAGCCTTCGA 62.257 60.000 0.00 0.00 0.00 3.71
85 86 1.639635 ATGCCCCTGAAGCCTTCGAT 61.640 55.000 0.00 0.00 0.00 3.59
86 87 1.524849 GCCCCTGAAGCCTTCGATC 60.525 63.158 0.00 0.00 0.00 3.69
87 88 1.147153 CCCCTGAAGCCTTCGATCC 59.853 63.158 0.00 0.00 0.00 3.36
88 89 1.147153 CCCTGAAGCCTTCGATCCC 59.853 63.158 0.00 0.00 0.00 3.85
89 90 1.626356 CCCTGAAGCCTTCGATCCCA 61.626 60.000 0.00 0.00 0.00 4.37
90 91 0.471617 CCTGAAGCCTTCGATCCCAT 59.528 55.000 0.00 0.00 0.00 4.00
91 92 1.542108 CCTGAAGCCTTCGATCCCATC 60.542 57.143 0.00 0.00 0.00 3.51
99 100 4.284860 CGATCCCATCGCCGCTGA 62.285 66.667 0.00 0.00 46.55 4.26
100 101 2.108976 GATCCCATCGCCGCTGAA 59.891 61.111 0.00 0.00 0.00 3.02
101 102 1.523711 GATCCCATCGCCGCTGAAA 60.524 57.895 0.00 0.00 0.00 2.69
102 103 1.077787 ATCCCATCGCCGCTGAAAA 60.078 52.632 0.00 0.00 0.00 2.29
103 104 1.376609 ATCCCATCGCCGCTGAAAAC 61.377 55.000 0.00 0.00 0.00 2.43
104 105 2.485122 CCATCGCCGCTGAAAACC 59.515 61.111 0.00 0.00 0.00 3.27
105 106 2.040544 CCATCGCCGCTGAAAACCT 61.041 57.895 0.00 0.00 0.00 3.50
106 107 1.135315 CATCGCCGCTGAAAACCTG 59.865 57.895 0.00 0.00 0.00 4.00
107 108 1.003839 ATCGCCGCTGAAAACCTGA 60.004 52.632 0.00 0.00 0.00 3.86
108 109 0.605319 ATCGCCGCTGAAAACCTGAA 60.605 50.000 0.00 0.00 0.00 3.02
109 110 0.816018 TCGCCGCTGAAAACCTGAAA 60.816 50.000 0.00 0.00 0.00 2.69
110 111 0.660300 CGCCGCTGAAAACCTGAAAC 60.660 55.000 0.00 0.00 0.00 2.78
111 112 0.318699 GCCGCTGAAAACCTGAAACC 60.319 55.000 0.00 0.00 0.00 3.27
112 113 0.313987 CCGCTGAAAACCTGAAACCC 59.686 55.000 0.00 0.00 0.00 4.11
113 114 1.318576 CGCTGAAAACCTGAAACCCT 58.681 50.000 0.00 0.00 0.00 4.34
114 115 2.500229 CGCTGAAAACCTGAAACCCTA 58.500 47.619 0.00 0.00 0.00 3.53
115 116 2.484264 CGCTGAAAACCTGAAACCCTAG 59.516 50.000 0.00 0.00 0.00 3.02
116 117 2.229062 GCTGAAAACCTGAAACCCTAGC 59.771 50.000 0.00 0.00 0.00 3.42
117 118 2.820197 CTGAAAACCTGAAACCCTAGCC 59.180 50.000 0.00 0.00 0.00 3.93
118 119 2.168496 GAAAACCTGAAACCCTAGCCC 58.832 52.381 0.00 0.00 0.00 5.19
119 120 0.037734 AAACCTGAAACCCTAGCCCG 59.962 55.000 0.00 0.00 0.00 6.13
120 121 0.838987 AACCTGAAACCCTAGCCCGA 60.839 55.000 0.00 0.00 0.00 5.14
121 122 1.265454 ACCTGAAACCCTAGCCCGAG 61.265 60.000 0.00 0.00 0.00 4.63
122 123 0.976073 CCTGAAACCCTAGCCCGAGA 60.976 60.000 0.00 0.00 0.00 4.04
123 124 0.902531 CTGAAACCCTAGCCCGAGAA 59.097 55.000 0.00 0.00 0.00 2.87
124 125 1.278127 CTGAAACCCTAGCCCGAGAAA 59.722 52.381 0.00 0.00 0.00 2.52
125 126 1.700739 TGAAACCCTAGCCCGAGAAAA 59.299 47.619 0.00 0.00 0.00 2.29
126 127 2.106857 TGAAACCCTAGCCCGAGAAAAA 59.893 45.455 0.00 0.00 0.00 1.94
127 128 2.195741 AACCCTAGCCCGAGAAAAAC 57.804 50.000 0.00 0.00 0.00 2.43
128 129 0.036671 ACCCTAGCCCGAGAAAAACG 60.037 55.000 0.00 0.00 0.00 3.60
129 130 0.248289 CCCTAGCCCGAGAAAAACGA 59.752 55.000 0.00 0.00 0.00 3.85
130 131 1.338389 CCCTAGCCCGAGAAAAACGAA 60.338 52.381 0.00 0.00 0.00 3.85
131 132 2.629051 CCTAGCCCGAGAAAAACGAAT 58.371 47.619 0.00 0.00 0.00 3.34
132 133 2.608090 CCTAGCCCGAGAAAAACGAATC 59.392 50.000 0.00 0.00 0.00 2.52
133 134 1.076332 AGCCCGAGAAAAACGAATCG 58.924 50.000 0.00 0.00 35.02 3.34
138 139 3.531262 CGAGAAAAACGAATCGGGTTT 57.469 42.857 7.80 6.56 39.15 3.27
139 140 3.223157 CGAGAAAAACGAATCGGGTTTG 58.777 45.455 7.80 0.00 37.64 2.93
140 141 3.059461 CGAGAAAAACGAATCGGGTTTGA 60.059 43.478 7.80 0.00 37.64 2.69
141 142 4.553156 CGAGAAAAACGAATCGGGTTTGAA 60.553 41.667 7.80 0.00 37.64 2.69
142 143 4.855531 AGAAAAACGAATCGGGTTTGAAG 58.144 39.130 7.80 0.00 37.64 3.02
143 144 2.699251 AAACGAATCGGGTTTGAAGC 57.301 45.000 7.80 0.00 36.33 3.86
144 145 1.892209 AACGAATCGGGTTTGAAGCT 58.108 45.000 7.80 0.00 0.00 3.74
145 146 1.156736 ACGAATCGGGTTTGAAGCTG 58.843 50.000 7.80 0.00 0.00 4.24
146 147 0.447801 CGAATCGGGTTTGAAGCTGG 59.552 55.000 0.00 0.00 33.71 4.85
147 148 0.171231 GAATCGGGTTTGAAGCTGGC 59.829 55.000 0.00 0.00 33.71 4.85
148 149 1.250840 AATCGGGTTTGAAGCTGGCC 61.251 55.000 0.00 0.00 33.71 5.36
149 150 3.373565 CGGGTTTGAAGCTGGCCC 61.374 66.667 0.00 0.00 36.08 5.80
150 151 2.118294 GGGTTTGAAGCTGGCCCT 59.882 61.111 0.00 0.00 36.49 5.19
151 152 1.382629 GGGTTTGAAGCTGGCCCTA 59.617 57.895 0.00 0.00 36.49 3.53
152 153 0.251608 GGGTTTGAAGCTGGCCCTAA 60.252 55.000 0.00 0.00 36.49 2.69
153 154 0.888619 GGTTTGAAGCTGGCCCTAAC 59.111 55.000 0.00 0.00 0.00 2.34
154 155 1.547901 GGTTTGAAGCTGGCCCTAACT 60.548 52.381 0.00 0.00 0.00 2.24
155 156 1.813178 GTTTGAAGCTGGCCCTAACTC 59.187 52.381 0.00 0.00 0.00 3.01
156 157 1.362224 TTGAAGCTGGCCCTAACTCT 58.638 50.000 0.00 0.00 0.00 3.24
157 158 0.905357 TGAAGCTGGCCCTAACTCTC 59.095 55.000 0.00 0.00 0.00 3.20
158 159 0.179234 GAAGCTGGCCCTAACTCTCC 59.821 60.000 0.00 0.00 0.00 3.71
159 160 0.547712 AAGCTGGCCCTAACTCTCCA 60.548 55.000 0.00 0.00 0.00 3.86
160 161 0.547712 AGCTGGCCCTAACTCTCCAA 60.548 55.000 0.00 0.00 0.00 3.53
161 162 0.393132 GCTGGCCCTAACTCTCCAAC 60.393 60.000 0.00 0.00 0.00 3.77
162 163 1.280457 CTGGCCCTAACTCTCCAACT 58.720 55.000 0.00 0.00 0.00 3.16
163 164 1.208293 CTGGCCCTAACTCTCCAACTC 59.792 57.143 0.00 0.00 0.00 3.01
164 165 1.276622 GGCCCTAACTCTCCAACTCA 58.723 55.000 0.00 0.00 0.00 3.41
165 166 1.628846 GGCCCTAACTCTCCAACTCAA 59.371 52.381 0.00 0.00 0.00 3.02
166 167 2.615747 GGCCCTAACTCTCCAACTCAAC 60.616 54.545 0.00 0.00 0.00 3.18
167 168 2.615747 GCCCTAACTCTCCAACTCAACC 60.616 54.545 0.00 0.00 0.00 3.77
168 169 2.637872 CCCTAACTCTCCAACTCAACCA 59.362 50.000 0.00 0.00 0.00 3.67
169 170 3.557264 CCCTAACTCTCCAACTCAACCAC 60.557 52.174 0.00 0.00 0.00 4.16
170 171 2.640316 AACTCTCCAACTCAACCACC 57.360 50.000 0.00 0.00 0.00 4.61
171 172 1.507140 ACTCTCCAACTCAACCACCA 58.493 50.000 0.00 0.00 0.00 4.17
172 173 1.417890 ACTCTCCAACTCAACCACCAG 59.582 52.381 0.00 0.00 0.00 4.00
173 174 1.694150 CTCTCCAACTCAACCACCAGA 59.306 52.381 0.00 0.00 0.00 3.86
174 175 2.304180 CTCTCCAACTCAACCACCAGAT 59.696 50.000 0.00 0.00 0.00 2.90
175 176 2.038952 TCTCCAACTCAACCACCAGATG 59.961 50.000 0.00 0.00 0.00 2.90
176 177 2.038952 CTCCAACTCAACCACCAGATGA 59.961 50.000 0.00 0.00 0.00 2.92
177 178 2.154462 CCAACTCAACCACCAGATGAC 58.846 52.381 0.00 0.00 0.00 3.06
178 179 1.800586 CAACTCAACCACCAGATGACG 59.199 52.381 0.00 0.00 0.00 4.35
179 180 0.320771 ACTCAACCACCAGATGACGC 60.321 55.000 0.00 0.00 0.00 5.19
180 181 1.354337 CTCAACCACCAGATGACGCG 61.354 60.000 3.53 3.53 0.00 6.01
181 182 2.742372 AACCACCAGATGACGCGC 60.742 61.111 5.73 0.00 0.00 6.86
182 183 4.760047 ACCACCAGATGACGCGCC 62.760 66.667 5.73 0.00 0.00 6.53
183 184 4.758251 CCACCAGATGACGCGCCA 62.758 66.667 5.73 0.00 0.00 5.69
184 185 2.741985 CACCAGATGACGCGCCAA 60.742 61.111 5.73 0.00 0.00 4.52
185 186 2.434884 ACCAGATGACGCGCCAAG 60.435 61.111 5.73 0.00 0.00 3.61
186 187 3.197790 CCAGATGACGCGCCAAGG 61.198 66.667 5.73 1.09 0.00 3.61
187 188 2.125552 CAGATGACGCGCCAAGGA 60.126 61.111 5.73 0.00 0.00 3.36
188 189 2.125512 AGATGACGCGCCAAGGAC 60.126 61.111 5.73 0.00 0.00 3.85
189 190 3.554692 GATGACGCGCCAAGGACG 61.555 66.667 5.73 0.00 0.00 4.79
195 196 4.699522 GCGCCAAGGACGGGAAGT 62.700 66.667 0.00 0.00 0.00 3.01
196 197 2.742372 CGCCAAGGACGGGAAGTG 60.742 66.667 0.00 0.00 0.00 3.16
197 198 2.747686 GCCAAGGACGGGAAGTGA 59.252 61.111 0.00 0.00 0.00 3.41
198 199 1.299976 GCCAAGGACGGGAAGTGAT 59.700 57.895 0.00 0.00 0.00 3.06
199 200 1.026718 GCCAAGGACGGGAAGTGATG 61.027 60.000 0.00 0.00 0.00 3.07
200 201 1.026718 CCAAGGACGGGAAGTGATGC 61.027 60.000 0.00 0.00 0.00 3.91
201 202 0.036010 CAAGGACGGGAAGTGATGCT 60.036 55.000 0.00 0.00 0.00 3.79
202 203 1.207089 CAAGGACGGGAAGTGATGCTA 59.793 52.381 0.00 0.00 0.00 3.49
203 204 1.115467 AGGACGGGAAGTGATGCTAG 58.885 55.000 0.00 0.00 0.00 3.42
204 205 1.112113 GGACGGGAAGTGATGCTAGA 58.888 55.000 0.00 0.00 0.00 2.43
205 206 1.689273 GGACGGGAAGTGATGCTAGAT 59.311 52.381 0.00 0.00 0.00 1.98
206 207 2.288518 GGACGGGAAGTGATGCTAGATC 60.289 54.545 0.00 0.00 0.00 2.75
207 208 2.362397 GACGGGAAGTGATGCTAGATCA 59.638 50.000 0.00 0.00 0.00 2.92
208 209 2.101582 ACGGGAAGTGATGCTAGATCAC 59.898 50.000 19.42 19.42 46.41 3.06
215 216 4.689612 GTGATGCTAGATCACCCCTTAA 57.310 45.455 17.61 0.00 41.77 1.85
216 217 5.234466 GTGATGCTAGATCACCCCTTAAT 57.766 43.478 17.61 0.00 41.77 1.40
217 218 5.241662 GTGATGCTAGATCACCCCTTAATC 58.758 45.833 17.61 0.00 41.77 1.75
218 219 4.907269 TGATGCTAGATCACCCCTTAATCA 59.093 41.667 0.00 0.00 0.00 2.57
219 220 4.963318 TGCTAGATCACCCCTTAATCAG 57.037 45.455 0.00 0.00 0.00 2.90
220 221 3.071602 TGCTAGATCACCCCTTAATCAGC 59.928 47.826 0.00 0.00 0.00 4.26
221 222 3.558109 GCTAGATCACCCCTTAATCAGCC 60.558 52.174 0.00 0.00 0.00 4.85
222 223 1.777272 AGATCACCCCTTAATCAGCCC 59.223 52.381 0.00 0.00 0.00 5.19
223 224 0.474184 ATCACCCCTTAATCAGCCCG 59.526 55.000 0.00 0.00 0.00 6.13
224 225 0.619255 TCACCCCTTAATCAGCCCGA 60.619 55.000 0.00 0.00 0.00 5.14
225 226 0.179045 CACCCCTTAATCAGCCCGAG 60.179 60.000 0.00 0.00 0.00 4.63
226 227 1.227973 CCCCTTAATCAGCCCGAGC 60.228 63.158 0.00 0.00 40.32 5.03
227 228 1.227973 CCCTTAATCAGCCCGAGCC 60.228 63.158 0.00 0.00 41.25 4.70
228 229 1.526887 CCTTAATCAGCCCGAGCCA 59.473 57.895 0.00 0.00 41.25 4.75
229 230 0.109342 CCTTAATCAGCCCGAGCCAT 59.891 55.000 0.00 0.00 41.25 4.40
230 231 1.517242 CTTAATCAGCCCGAGCCATC 58.483 55.000 0.00 0.00 41.25 3.51
231 232 0.836606 TTAATCAGCCCGAGCCATCA 59.163 50.000 0.00 0.00 41.25 3.07
232 233 1.059098 TAATCAGCCCGAGCCATCAT 58.941 50.000 0.00 0.00 41.25 2.45
233 234 1.059098 AATCAGCCCGAGCCATCATA 58.941 50.000 0.00 0.00 41.25 2.15
234 235 1.059098 ATCAGCCCGAGCCATCATAA 58.941 50.000 0.00 0.00 41.25 1.90
235 236 1.059098 TCAGCCCGAGCCATCATAAT 58.941 50.000 0.00 0.00 41.25 1.28
236 237 1.002430 TCAGCCCGAGCCATCATAATC 59.998 52.381 0.00 0.00 41.25 1.75
237 238 0.326264 AGCCCGAGCCATCATAATCC 59.674 55.000 0.00 0.00 41.25 3.01
238 239 1.021390 GCCCGAGCCATCATAATCCG 61.021 60.000 0.00 0.00 0.00 4.18
239 240 0.391661 CCCGAGCCATCATAATCCGG 60.392 60.000 0.00 0.00 35.68 5.14
240 241 0.391661 CCGAGCCATCATAATCCGGG 60.392 60.000 0.00 0.00 32.64 5.73
241 242 0.391661 CGAGCCATCATAATCCGGGG 60.392 60.000 0.00 0.00 0.00 5.73
242 243 0.035056 GAGCCATCATAATCCGGGGG 60.035 60.000 0.00 0.00 0.00 5.40
257 258 2.849646 GGGGGAATCGGAGGAGGG 60.850 72.222 0.00 0.00 0.00 4.30
258 259 2.849646 GGGGAATCGGAGGAGGGG 60.850 72.222 0.00 0.00 0.00 4.79
259 260 2.285868 GGGAATCGGAGGAGGGGA 59.714 66.667 0.00 0.00 0.00 4.81
260 261 1.839296 GGGAATCGGAGGAGGGGAG 60.839 68.421 0.00 0.00 0.00 4.30
261 262 1.839296 GGAATCGGAGGAGGGGAGG 60.839 68.421 0.00 0.00 0.00 4.30
262 263 1.075151 GAATCGGAGGAGGGGAGGT 60.075 63.158 0.00 0.00 0.00 3.85
263 264 0.187851 GAATCGGAGGAGGGGAGGTA 59.812 60.000 0.00 0.00 0.00 3.08
264 265 0.640495 AATCGGAGGAGGGGAGGTAA 59.360 55.000 0.00 0.00 0.00 2.85
265 266 0.188834 ATCGGAGGAGGGGAGGTAAG 59.811 60.000 0.00 0.00 0.00 2.34
266 267 0.922738 TCGGAGGAGGGGAGGTAAGA 60.923 60.000 0.00 0.00 0.00 2.10
267 268 0.468400 CGGAGGAGGGGAGGTAAGAG 60.468 65.000 0.00 0.00 0.00 2.85
268 269 0.761323 GGAGGAGGGGAGGTAAGAGC 60.761 65.000 0.00 0.00 0.00 4.09
269 270 0.263468 GAGGAGGGGAGGTAAGAGCT 59.737 60.000 0.00 0.00 0.00 4.09
270 271 0.263468 AGGAGGGGAGGTAAGAGCTC 59.737 60.000 5.27 5.27 41.73 4.09
271 272 1.110518 GGAGGGGAGGTAAGAGCTCG 61.111 65.000 8.37 0.00 43.29 5.03
272 273 0.106619 GAGGGGAGGTAAGAGCTCGA 60.107 60.000 8.37 0.00 43.29 4.04
273 274 0.396001 AGGGGAGGTAAGAGCTCGAC 60.396 60.000 8.37 10.56 43.29 4.20
274 275 1.726533 GGGGAGGTAAGAGCTCGACG 61.727 65.000 8.37 0.00 43.29 5.12
275 276 0.747283 GGGAGGTAAGAGCTCGACGA 60.747 60.000 8.37 0.00 43.29 4.20
276 277 0.377905 GGAGGTAAGAGCTCGACGAC 59.622 60.000 8.37 5.01 43.29 4.34
277 278 0.026544 GAGGTAAGAGCTCGACGACG 59.973 60.000 8.37 0.00 41.26 5.12
278 279 1.062206 GGTAAGAGCTCGACGACGG 59.938 63.158 8.37 0.00 40.21 4.79
279 280 1.642952 GGTAAGAGCTCGACGACGGT 61.643 60.000 8.37 0.00 40.21 4.83
280 281 0.167689 GTAAGAGCTCGACGACGGTT 59.832 55.000 8.37 0.00 40.21 4.44
281 282 0.167470 TAAGAGCTCGACGACGGTTG 59.833 55.000 8.37 0.00 40.21 3.77
282 283 2.473664 AAGAGCTCGACGACGGTTGG 62.474 60.000 8.37 0.00 40.21 3.77
283 284 2.974489 GAGCTCGACGACGGTTGGA 61.974 63.158 7.55 0.00 40.21 3.53
284 285 2.181021 GCTCGACGACGGTTGGAT 59.819 61.111 7.55 0.00 40.21 3.41
285 286 1.872679 GCTCGACGACGGTTGGATC 60.873 63.158 7.55 0.00 40.21 3.36
286 287 1.582937 CTCGACGACGGTTGGATCG 60.583 63.158 7.55 1.45 43.97 3.69
287 288 3.245315 CGACGACGGTTGGATCGC 61.245 66.667 0.00 0.00 42.12 4.58
288 289 2.884207 GACGACGGTTGGATCGCC 60.884 66.667 0.00 0.00 42.12 5.54
289 290 3.636313 GACGACGGTTGGATCGCCA 62.636 63.158 0.00 0.00 44.17 5.69
290 291 3.186047 CGACGGTTGGATCGCCAC 61.186 66.667 0.00 0.00 45.94 5.01
291 292 2.818274 GACGGTTGGATCGCCACC 60.818 66.667 0.00 0.00 45.94 4.61
295 296 4.090588 GTTGGATCGCCACCGGGA 62.091 66.667 6.32 0.00 45.94 5.14
296 297 3.781307 TTGGATCGCCACCGGGAG 61.781 66.667 6.32 0.00 45.94 4.30
298 299 3.467226 GGATCGCCACCGGGAGAA 61.467 66.667 6.32 0.00 46.54 2.87
299 300 2.582436 GATCGCCACCGGGAGAAA 59.418 61.111 6.32 0.00 46.54 2.52
300 301 1.521681 GATCGCCACCGGGAGAAAG 60.522 63.158 6.32 0.00 46.54 2.62
301 302 3.682292 ATCGCCACCGGGAGAAAGC 62.682 63.158 6.32 0.00 46.54 3.51
302 303 4.697756 CGCCACCGGGAGAAAGCA 62.698 66.667 6.32 0.00 35.76 3.91
303 304 2.282180 GCCACCGGGAGAAAGCAA 60.282 61.111 6.32 0.00 35.59 3.91
304 305 1.901464 GCCACCGGGAGAAAGCAAA 60.901 57.895 6.32 0.00 35.59 3.68
305 306 1.460273 GCCACCGGGAGAAAGCAAAA 61.460 55.000 6.32 0.00 35.59 2.44
306 307 0.313987 CCACCGGGAGAAAGCAAAAC 59.686 55.000 6.32 0.00 35.59 2.43
307 308 0.313987 CACCGGGAGAAAGCAAAACC 59.686 55.000 6.32 0.00 0.00 3.27
308 309 0.826256 ACCGGGAGAAAGCAAAACCC 60.826 55.000 6.32 0.00 37.42 4.11
309 310 0.539669 CCGGGAGAAAGCAAAACCCT 60.540 55.000 0.00 0.00 38.51 4.34
310 311 1.271707 CCGGGAGAAAGCAAAACCCTA 60.272 52.381 0.00 0.00 38.51 3.53
311 312 2.084546 CGGGAGAAAGCAAAACCCTAG 58.915 52.381 0.00 0.00 38.51 3.02
312 313 1.819288 GGGAGAAAGCAAAACCCTAGC 59.181 52.381 0.00 0.00 37.75 3.42
313 314 2.555448 GGGAGAAAGCAAAACCCTAGCT 60.555 50.000 0.00 0.00 41.03 3.32
314 315 3.308188 GGGAGAAAGCAAAACCCTAGCTA 60.308 47.826 0.00 0.00 37.70 3.32
315 316 3.942115 GGAGAAAGCAAAACCCTAGCTAG 59.058 47.826 14.20 14.20 37.70 3.42
316 317 4.323562 GGAGAAAGCAAAACCCTAGCTAGA 60.324 45.833 22.70 0.00 37.70 2.43
317 318 4.837972 AGAAAGCAAAACCCTAGCTAGAG 58.162 43.478 22.70 11.93 37.70 2.43
318 319 3.636153 AAGCAAAACCCTAGCTAGAGG 57.364 47.619 22.70 21.44 37.70 3.69
327 328 3.201353 CCTAGCTAGAGGGAAAAAGGC 57.799 52.381 22.70 0.00 32.39 4.35
328 329 2.158740 CCTAGCTAGAGGGAAAAAGGCC 60.159 54.545 22.70 0.00 32.39 5.19
329 330 0.626382 AGCTAGAGGGAAAAAGGCCC 59.374 55.000 0.00 0.00 46.40 5.80
334 335 2.858655 GGGAAAAAGGCCCTGGGA 59.141 61.111 19.27 0.00 42.56 4.37
335 336 1.157513 GGGAAAAAGGCCCTGGGAA 59.842 57.895 19.27 0.00 42.56 3.97
336 337 0.904865 GGGAAAAAGGCCCTGGGAAG 60.905 60.000 19.27 0.00 42.56 3.46
337 338 0.114364 GGAAAAAGGCCCTGGGAAGA 59.886 55.000 19.27 0.00 0.00 2.87
338 339 1.482365 GGAAAAAGGCCCTGGGAAGAA 60.482 52.381 19.27 0.00 0.00 2.52
339 340 1.895798 GAAAAAGGCCCTGGGAAGAAG 59.104 52.381 19.27 0.00 0.00 2.85
340 341 0.542938 AAAAGGCCCTGGGAAGAAGC 60.543 55.000 19.27 0.00 0.00 3.86
341 342 1.729267 AAAGGCCCTGGGAAGAAGCA 61.729 55.000 19.27 0.00 0.00 3.91
342 343 1.729267 AAGGCCCTGGGAAGAAGCAA 61.729 55.000 19.27 0.00 0.00 3.91
343 344 1.979155 GGCCCTGGGAAGAAGCAAC 60.979 63.158 19.27 0.00 0.00 4.17
344 345 1.228552 GCCCTGGGAAGAAGCAACA 60.229 57.895 19.27 0.00 0.00 3.33
345 346 0.613012 GCCCTGGGAAGAAGCAACAT 60.613 55.000 19.27 0.00 0.00 2.71
346 347 1.340991 GCCCTGGGAAGAAGCAACATA 60.341 52.381 19.27 0.00 0.00 2.29
347 348 2.883888 GCCCTGGGAAGAAGCAACATAA 60.884 50.000 19.27 0.00 0.00 1.90
348 349 3.430453 CCCTGGGAAGAAGCAACATAAA 58.570 45.455 7.01 0.00 0.00 1.40
349 350 3.831911 CCCTGGGAAGAAGCAACATAAAA 59.168 43.478 7.01 0.00 0.00 1.52
350 351 4.467438 CCCTGGGAAGAAGCAACATAAAAT 59.533 41.667 7.01 0.00 0.00 1.82
351 352 5.413499 CCTGGGAAGAAGCAACATAAAATG 58.587 41.667 0.00 0.00 0.00 2.32
393 394 8.905103 ATAATGTTAAATGCGTACTGAAAACC 57.095 30.769 0.00 0.00 0.00 3.27
394 395 5.752892 TGTTAAATGCGTACTGAAAACCA 57.247 34.783 0.00 0.00 0.00 3.67
395 396 6.132791 TGTTAAATGCGTACTGAAAACCAA 57.867 33.333 0.00 0.00 0.00 3.67
396 397 6.202937 TGTTAAATGCGTACTGAAAACCAAG 58.797 36.000 0.00 0.00 0.00 3.61
397 398 6.038382 TGTTAAATGCGTACTGAAAACCAAGA 59.962 34.615 0.00 0.00 0.00 3.02
398 399 5.508200 AAATGCGTACTGAAAACCAAGAA 57.492 34.783 0.00 0.00 0.00 2.52
399 400 5.508200 AATGCGTACTGAAAACCAAGAAA 57.492 34.783 0.00 0.00 0.00 2.52
400 401 4.966965 TGCGTACTGAAAACCAAGAAAA 57.033 36.364 0.00 0.00 0.00 2.29
401 402 5.312120 TGCGTACTGAAAACCAAGAAAAA 57.688 34.783 0.00 0.00 0.00 1.94
402 403 5.897050 TGCGTACTGAAAACCAAGAAAAAT 58.103 33.333 0.00 0.00 0.00 1.82
403 404 6.334202 TGCGTACTGAAAACCAAGAAAAATT 58.666 32.000 0.00 0.00 0.00 1.82
404 405 6.254589 TGCGTACTGAAAACCAAGAAAAATTG 59.745 34.615 0.00 0.00 0.00 2.32
405 406 6.474102 GCGTACTGAAAACCAAGAAAAATTGA 59.526 34.615 0.00 0.00 31.55 2.57
406 407 7.009723 GCGTACTGAAAACCAAGAAAAATTGAA 59.990 33.333 0.00 0.00 31.55 2.69
407 408 8.865001 CGTACTGAAAACCAAGAAAAATTGAAA 58.135 29.630 0.00 0.00 31.55 2.69
440 441 9.549078 AAAGTAAACAAAGAACAAGAAAAACCA 57.451 25.926 0.00 0.00 0.00 3.67
441 442 9.549078 AAGTAAACAAAGAACAAGAAAAACCAA 57.451 25.926 0.00 0.00 0.00 3.67
442 443 9.549078 AGTAAACAAAGAACAAGAAAAACCAAA 57.451 25.926 0.00 0.00 0.00 3.28
443 444 9.805966 GTAAACAAAGAACAAGAAAAACCAAAG 57.194 29.630 0.00 0.00 0.00 2.77
444 445 8.669946 AAACAAAGAACAAGAAAAACCAAAGA 57.330 26.923 0.00 0.00 0.00 2.52
445 446 8.669946 AACAAAGAACAAGAAAAACCAAAGAA 57.330 26.923 0.00 0.00 0.00 2.52
446 447 8.669946 ACAAAGAACAAGAAAAACCAAAGAAA 57.330 26.923 0.00 0.00 0.00 2.52
447 448 9.114952 ACAAAGAACAAGAAAAACCAAAGAAAA 57.885 25.926 0.00 0.00 0.00 2.29
448 449 9.381027 CAAAGAACAAGAAAAACCAAAGAAAAC 57.619 29.630 0.00 0.00 0.00 2.43
449 450 7.667043 AGAACAAGAAAAACCAAAGAAAACC 57.333 32.000 0.00 0.00 0.00 3.27
450 451 7.220740 AGAACAAGAAAAACCAAAGAAAACCA 58.779 30.769 0.00 0.00 0.00 3.67
451 452 7.717436 AGAACAAGAAAAACCAAAGAAAACCAA 59.283 29.630 0.00 0.00 0.00 3.67
452 453 7.433708 ACAAGAAAAACCAAAGAAAACCAAG 57.566 32.000 0.00 0.00 0.00 3.61
453 454 7.220740 ACAAGAAAAACCAAAGAAAACCAAGA 58.779 30.769 0.00 0.00 0.00 3.02
454 455 7.717436 ACAAGAAAAACCAAAGAAAACCAAGAA 59.283 29.630 0.00 0.00 0.00 2.52
455 456 8.563732 CAAGAAAAACCAAAGAAAACCAAGAAA 58.436 29.630 0.00 0.00 0.00 2.52
456 457 8.322906 AGAAAAACCAAAGAAAACCAAGAAAG 57.677 30.769 0.00 0.00 0.00 2.62
457 458 8.154203 AGAAAAACCAAAGAAAACCAAGAAAGA 58.846 29.630 0.00 0.00 0.00 2.52
458 459 8.684386 AAAAACCAAAGAAAACCAAGAAAGAA 57.316 26.923 0.00 0.00 0.00 2.52
459 460 8.684386 AAAACCAAAGAAAACCAAGAAAGAAA 57.316 26.923 0.00 0.00 0.00 2.52
460 461 7.667043 AACCAAAGAAAACCAAGAAAGAAAC 57.333 32.000 0.00 0.00 0.00 2.78
461 462 6.764379 ACCAAAGAAAACCAAGAAAGAAACA 58.236 32.000 0.00 0.00 0.00 2.83
462 463 6.873605 ACCAAAGAAAACCAAGAAAGAAACAG 59.126 34.615 0.00 0.00 0.00 3.16
463 464 7.096551 CCAAAGAAAACCAAGAAAGAAACAGA 58.903 34.615 0.00 0.00 0.00 3.41
464 465 7.602265 CCAAAGAAAACCAAGAAAGAAACAGAA 59.398 33.333 0.00 0.00 0.00 3.02
465 466 8.987890 CAAAGAAAACCAAGAAAGAAACAGAAA 58.012 29.630 0.00 0.00 0.00 2.52
466 467 9.554395 AAAGAAAACCAAGAAAGAAACAGAAAA 57.446 25.926 0.00 0.00 0.00 2.29
467 468 9.554395 AAGAAAACCAAGAAAGAAACAGAAAAA 57.446 25.926 0.00 0.00 0.00 1.94
511 512 4.687901 AAAACCAATGAAAACCAGGGAG 57.312 40.909 0.00 0.00 0.00 4.30
512 513 3.611025 AACCAATGAAAACCAGGGAGA 57.389 42.857 0.00 0.00 0.00 3.71
513 514 3.611025 ACCAATGAAAACCAGGGAGAA 57.389 42.857 0.00 0.00 0.00 2.87
514 515 3.922375 ACCAATGAAAACCAGGGAGAAA 58.078 40.909 0.00 0.00 0.00 2.52
515 516 3.641436 ACCAATGAAAACCAGGGAGAAAC 59.359 43.478 0.00 0.00 0.00 2.78
516 517 3.640967 CCAATGAAAACCAGGGAGAAACA 59.359 43.478 0.00 0.00 0.00 2.83
517 518 4.100808 CCAATGAAAACCAGGGAGAAACAA 59.899 41.667 0.00 0.00 0.00 2.83
518 519 5.396213 CCAATGAAAACCAGGGAGAAACAAA 60.396 40.000 0.00 0.00 0.00 2.83
519 520 5.535753 ATGAAAACCAGGGAGAAACAAAG 57.464 39.130 0.00 0.00 0.00 2.77
520 521 4.605183 TGAAAACCAGGGAGAAACAAAGA 58.395 39.130 0.00 0.00 0.00 2.52
521 522 5.020132 TGAAAACCAGGGAGAAACAAAGAA 58.980 37.500 0.00 0.00 0.00 2.52
522 523 5.482175 TGAAAACCAGGGAGAAACAAAGAAA 59.518 36.000 0.00 0.00 0.00 2.52
523 524 6.014156 TGAAAACCAGGGAGAAACAAAGAAAA 60.014 34.615 0.00 0.00 0.00 2.29
524 525 5.339008 AACCAGGGAGAAACAAAGAAAAC 57.661 39.130 0.00 0.00 0.00 2.43
525 526 3.704566 ACCAGGGAGAAACAAAGAAAACC 59.295 43.478 0.00 0.00 0.00 3.27
526 527 3.243401 CCAGGGAGAAACAAAGAAAACCG 60.243 47.826 0.00 0.00 0.00 4.44
527 528 2.956333 AGGGAGAAACAAAGAAAACCGG 59.044 45.455 0.00 0.00 0.00 5.28
528 529 2.691526 GGGAGAAACAAAGAAAACCGGT 59.308 45.455 0.00 0.00 0.00 5.28
529 530 3.884693 GGGAGAAACAAAGAAAACCGGTA 59.115 43.478 8.00 0.00 0.00 4.02
530 531 4.023450 GGGAGAAACAAAGAAAACCGGTAG 60.023 45.833 8.00 0.00 0.00 3.18
531 532 4.023450 GGAGAAACAAAGAAAACCGGTAGG 60.023 45.833 8.00 0.00 45.13 3.18
532 533 4.784177 AGAAACAAAGAAAACCGGTAGGA 58.216 39.130 8.00 0.00 41.02 2.94
533 534 4.820173 AGAAACAAAGAAAACCGGTAGGAG 59.180 41.667 8.00 0.00 41.02 3.69
534 535 2.501261 ACAAAGAAAACCGGTAGGAGC 58.499 47.619 8.00 0.00 41.02 4.70
535 536 1.810755 CAAAGAAAACCGGTAGGAGCC 59.189 52.381 8.00 0.00 41.02 4.70
536 537 1.061546 AAGAAAACCGGTAGGAGCCA 58.938 50.000 8.00 0.00 41.02 4.75
537 538 1.286248 AGAAAACCGGTAGGAGCCAT 58.714 50.000 8.00 0.00 41.02 4.40
538 539 1.633945 AGAAAACCGGTAGGAGCCATT 59.366 47.619 8.00 0.00 41.02 3.16
539 540 2.841881 AGAAAACCGGTAGGAGCCATTA 59.158 45.455 8.00 0.00 41.02 1.90
540 541 3.264964 AGAAAACCGGTAGGAGCCATTAA 59.735 43.478 8.00 0.00 41.02 1.40
541 542 3.724732 AAACCGGTAGGAGCCATTAAA 57.275 42.857 8.00 0.00 41.02 1.52
542 543 3.724732 AACCGGTAGGAGCCATTAAAA 57.275 42.857 8.00 0.00 41.02 1.52
543 544 3.724732 ACCGGTAGGAGCCATTAAAAA 57.275 42.857 4.49 0.00 41.02 1.94
544 545 4.245251 ACCGGTAGGAGCCATTAAAAAT 57.755 40.909 4.49 0.00 41.02 1.82
545 546 5.376756 ACCGGTAGGAGCCATTAAAAATA 57.623 39.130 4.49 0.00 41.02 1.40
546 547 5.757988 ACCGGTAGGAGCCATTAAAAATAA 58.242 37.500 4.49 0.00 41.02 1.40
547 548 6.370453 ACCGGTAGGAGCCATTAAAAATAAT 58.630 36.000 4.49 0.00 41.02 1.28
548 549 6.837048 ACCGGTAGGAGCCATTAAAAATAATT 59.163 34.615 4.49 0.00 41.02 1.40
549 550 7.145323 CCGGTAGGAGCCATTAAAAATAATTG 58.855 38.462 0.00 0.00 41.02 2.32
550 551 7.013846 CCGGTAGGAGCCATTAAAAATAATTGA 59.986 37.037 0.00 0.00 41.02 2.57
551 552 8.410141 CGGTAGGAGCCATTAAAAATAATTGAA 58.590 33.333 0.00 0.00 0.00 2.69
554 555 8.702163 AGGAGCCATTAAAAATAATTGAAACG 57.298 30.769 0.00 0.00 0.00 3.60
555 556 8.527810 AGGAGCCATTAAAAATAATTGAAACGA 58.472 29.630 0.00 0.00 0.00 3.85
556 557 9.313118 GGAGCCATTAAAAATAATTGAAACGAT 57.687 29.630 0.00 0.00 0.00 3.73
558 559 9.868277 AGCCATTAAAAATAATTGAAACGATGA 57.132 25.926 0.00 0.00 0.00 2.92
582 583 5.503689 AAAACAAAAACAACGGAGAAACG 57.496 34.783 0.00 0.00 40.31 3.60
596 597 7.481275 ACGGAGAAACGTAAAGATAAACAAA 57.519 32.000 0.00 0.00 46.58 2.83
597 598 7.918643 ACGGAGAAACGTAAAGATAAACAAAA 58.081 30.769 0.00 0.00 46.58 2.44
598 599 8.066000 ACGGAGAAACGTAAAGATAAACAAAAG 58.934 33.333 0.00 0.00 46.58 2.27
599 600 8.277713 CGGAGAAACGTAAAGATAAACAAAAGA 58.722 33.333 0.00 0.00 0.00 2.52
600 601 9.940166 GGAGAAACGTAAAGATAAACAAAAGAA 57.060 29.630 0.00 0.00 0.00 2.52
647 648 1.890041 CAAACCGACCCAGCGAACA 60.890 57.895 0.00 0.00 0.00 3.18
648 649 1.153127 AAACCGACCCAGCGAACAA 60.153 52.632 0.00 0.00 0.00 2.83
649 650 0.748729 AAACCGACCCAGCGAACAAA 60.749 50.000 0.00 0.00 0.00 2.83
732 733 1.355066 CTTCCGTCTCGCTTTGAGCC 61.355 60.000 0.00 0.00 44.86 4.70
733 734 2.048222 CCGTCTCGCTTTGAGCCA 60.048 61.111 0.00 0.00 44.86 4.75
896 924 1.003442 CCATCTCCCCCACCTCTCA 59.997 63.158 0.00 0.00 0.00 3.27
1080 1113 2.255856 GAGCCGATCCGATCCGAC 59.744 66.667 2.69 0.00 0.00 4.79
1203 1236 2.124736 GTCAAGGCCCTGCGCATA 60.125 61.111 12.24 0.00 40.31 3.14
1493 1526 2.203070 CGGTGATACTGCTGGGGC 60.203 66.667 0.00 0.00 39.26 5.80
1499 1532 1.460305 ATACTGCTGGGGCGAGGAT 60.460 57.895 0.00 0.00 42.25 3.24
2061 2094 1.145325 CCAGTCTACTCCCTATCCCGT 59.855 57.143 0.00 0.00 0.00 5.28
2077 2110 2.023695 TCCCGTTCCTACCCTTATGAGT 60.024 50.000 0.00 0.00 0.00 3.41
2510 2543 6.936279 TCCTACTTCTATTCAGTCCTTGTTG 58.064 40.000 0.00 0.00 0.00 3.33
2552 2585 3.057526 AGCGAGTTTTATGCTTTTCACCC 60.058 43.478 0.00 0.00 34.80 4.61
2742 2775 2.881074 CTTGTATGGCGGATCGATAGG 58.119 52.381 0.00 0.00 0.00 2.57
2779 2812 5.862678 TCTACACATCCGGTTTCATATGA 57.137 39.130 0.00 0.00 0.00 2.15
2902 2941 7.196331 CCACTTTTCCTAGTTTTGAAGAGTTG 58.804 38.462 1.49 0.00 34.72 3.16
3083 3131 8.237267 CGTTCTTGATATTTGTTAAGCCTCTTT 58.763 33.333 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.051556 AGGCCTTCGGGAAGAGGATC 61.052 60.000 0.00 0.00 40.79 3.36
1 2 0.264955 TAGGCCTTCGGGAAGAGGAT 59.735 55.000 12.58 0.00 40.79 3.24
2 3 0.397254 CTAGGCCTTCGGGAAGAGGA 60.397 60.000 12.58 0.00 40.79 3.71
3 4 0.688087 ACTAGGCCTTCGGGAAGAGG 60.688 60.000 12.58 0.00 40.79 3.69
4 5 1.137282 GAACTAGGCCTTCGGGAAGAG 59.863 57.143 12.58 0.91 40.79 2.85
5 6 1.192428 GAACTAGGCCTTCGGGAAGA 58.808 55.000 12.58 0.00 40.79 2.87
6 7 0.179108 CGAACTAGGCCTTCGGGAAG 60.179 60.000 12.58 2.76 37.46 3.46
7 8 1.895238 CGAACTAGGCCTTCGGGAA 59.105 57.895 12.58 0.00 37.46 3.97
8 9 3.612251 CGAACTAGGCCTTCGGGA 58.388 61.111 12.58 0.00 37.46 5.14
17 18 2.366916 AGAAGATGATGGCCGAACTAGG 59.633 50.000 0.00 0.00 0.00 3.02
18 19 3.068732 TGAGAAGATGATGGCCGAACTAG 59.931 47.826 0.00 0.00 0.00 2.57
19 20 3.031013 TGAGAAGATGATGGCCGAACTA 58.969 45.455 0.00 0.00 0.00 2.24
20 21 1.833630 TGAGAAGATGATGGCCGAACT 59.166 47.619 0.00 0.00 0.00 3.01
21 22 2.315925 TGAGAAGATGATGGCCGAAC 57.684 50.000 0.00 0.00 0.00 3.95
22 23 2.237143 AGTTGAGAAGATGATGGCCGAA 59.763 45.455 0.00 0.00 0.00 4.30
23 24 1.833630 AGTTGAGAAGATGATGGCCGA 59.166 47.619 0.00 0.00 0.00 5.54
24 25 2.322355 AGTTGAGAAGATGATGGCCG 57.678 50.000 0.00 0.00 0.00 6.13
25 26 2.948315 GGAAGTTGAGAAGATGATGGCC 59.052 50.000 0.00 0.00 0.00 5.36
26 27 2.611292 CGGAAGTTGAGAAGATGATGGC 59.389 50.000 0.00 0.00 0.00 4.40
27 28 4.128925 TCGGAAGTTGAGAAGATGATGG 57.871 45.455 0.00 0.00 0.00 3.51
28 29 4.749099 GGATCGGAAGTTGAGAAGATGATG 59.251 45.833 0.00 0.00 0.00 3.07
29 30 4.406972 TGGATCGGAAGTTGAGAAGATGAT 59.593 41.667 0.00 0.00 0.00 2.45
30 31 3.769300 TGGATCGGAAGTTGAGAAGATGA 59.231 43.478 0.00 0.00 0.00 2.92
31 32 4.118410 CTGGATCGGAAGTTGAGAAGATG 58.882 47.826 0.00 0.00 0.00 2.90
32 33 4.026744 TCTGGATCGGAAGTTGAGAAGAT 58.973 43.478 0.00 0.00 0.00 2.40
33 34 3.431415 TCTGGATCGGAAGTTGAGAAGA 58.569 45.455 0.00 0.00 0.00 2.87
34 35 3.430098 CCTCTGGATCGGAAGTTGAGAAG 60.430 52.174 0.00 0.00 0.00 2.85
35 36 2.497675 CCTCTGGATCGGAAGTTGAGAA 59.502 50.000 0.00 0.00 0.00 2.87
36 37 2.103373 CCTCTGGATCGGAAGTTGAGA 58.897 52.381 0.00 0.00 0.00 3.27
37 38 1.827969 ACCTCTGGATCGGAAGTTGAG 59.172 52.381 0.00 0.00 0.00 3.02
38 39 1.550524 CACCTCTGGATCGGAAGTTGA 59.449 52.381 0.00 0.00 0.00 3.18
39 40 1.406069 CCACCTCTGGATCGGAAGTTG 60.406 57.143 0.00 0.00 40.55 3.16
40 41 0.905357 CCACCTCTGGATCGGAAGTT 59.095 55.000 0.00 0.00 40.55 2.66
41 42 0.041238 TCCACCTCTGGATCGGAAGT 59.959 55.000 0.00 0.00 42.15 3.01
42 43 1.134670 GTTCCACCTCTGGATCGGAAG 60.135 57.143 0.00 0.00 46.64 3.46
43 44 0.902531 GTTCCACCTCTGGATCGGAA 59.097 55.000 0.00 0.00 46.64 4.30
44 45 0.041238 AGTTCCACCTCTGGATCGGA 59.959 55.000 0.00 0.00 46.64 4.55
45 46 0.461961 GAGTTCCACCTCTGGATCGG 59.538 60.000 0.00 0.00 46.64 4.18
46 47 0.101399 CGAGTTCCACCTCTGGATCG 59.899 60.000 0.00 0.00 46.64 3.69
47 48 1.475403 TCGAGTTCCACCTCTGGATC 58.525 55.000 0.00 0.00 46.64 3.36
48 49 1.759445 CATCGAGTTCCACCTCTGGAT 59.241 52.381 0.00 0.00 46.64 3.41
49 50 1.186200 CATCGAGTTCCACCTCTGGA 58.814 55.000 0.00 0.00 45.68 3.86
50 51 0.460987 GCATCGAGTTCCACCTCTGG 60.461 60.000 0.00 0.00 39.23 3.86
51 52 0.460987 GGCATCGAGTTCCACCTCTG 60.461 60.000 0.00 0.00 0.00 3.35
52 53 1.617947 GGGCATCGAGTTCCACCTCT 61.618 60.000 0.00 0.00 0.00 3.69
53 54 1.153349 GGGCATCGAGTTCCACCTC 60.153 63.158 0.00 0.00 0.00 3.85
54 55 2.670148 GGGGCATCGAGTTCCACCT 61.670 63.158 0.00 0.00 0.00 4.00
55 56 2.124695 GGGGCATCGAGTTCCACC 60.125 66.667 0.00 0.00 0.00 4.61
56 57 1.450312 CAGGGGCATCGAGTTCCAC 60.450 63.158 0.00 0.00 0.00 4.02
57 58 1.198094 TTCAGGGGCATCGAGTTCCA 61.198 55.000 0.00 0.00 0.00 3.53
58 59 0.462759 CTTCAGGGGCATCGAGTTCC 60.463 60.000 0.00 0.00 0.00 3.62
59 60 1.092345 GCTTCAGGGGCATCGAGTTC 61.092 60.000 0.00 0.00 0.00 3.01
60 61 1.078143 GCTTCAGGGGCATCGAGTT 60.078 57.895 0.00 0.00 0.00 3.01
61 62 2.586792 GCTTCAGGGGCATCGAGT 59.413 61.111 0.00 0.00 0.00 4.18
62 63 2.203126 GGCTTCAGGGGCATCGAG 60.203 66.667 0.00 0.00 0.00 4.04
63 64 2.257409 GAAGGCTTCAGGGGCATCGA 62.257 60.000 21.99 0.00 0.00 3.59
64 65 1.821332 GAAGGCTTCAGGGGCATCG 60.821 63.158 21.99 0.00 0.00 3.84
65 66 1.821332 CGAAGGCTTCAGGGGCATC 60.821 63.158 25.66 0.00 0.00 3.91
66 67 1.639635 ATCGAAGGCTTCAGGGGCAT 61.640 55.000 25.66 5.68 0.00 4.40
67 68 2.257409 GATCGAAGGCTTCAGGGGCA 62.257 60.000 25.66 3.63 0.00 5.36
68 69 1.524849 GATCGAAGGCTTCAGGGGC 60.525 63.158 25.66 7.33 0.00 5.80
69 70 1.147153 GGATCGAAGGCTTCAGGGG 59.853 63.158 25.66 10.42 0.00 4.79
70 71 1.147153 GGGATCGAAGGCTTCAGGG 59.853 63.158 25.66 10.77 0.00 4.45
71 72 0.471617 ATGGGATCGAAGGCTTCAGG 59.528 55.000 25.66 11.47 0.00 3.86
72 73 1.876322 GATGGGATCGAAGGCTTCAG 58.124 55.000 25.66 17.88 0.00 3.02
83 84 1.095228 TTTTCAGCGGCGATGGGATC 61.095 55.000 25.90 0.00 0.00 3.36
84 85 1.077787 TTTTCAGCGGCGATGGGAT 60.078 52.632 25.90 0.00 0.00 3.85
85 86 2.038269 GTTTTCAGCGGCGATGGGA 61.038 57.895 25.90 11.64 0.00 4.37
86 87 2.485122 GTTTTCAGCGGCGATGGG 59.515 61.111 25.90 0.00 0.00 4.00
87 88 2.040544 AGGTTTTCAGCGGCGATGG 61.041 57.895 25.90 6.78 0.00 3.51
88 89 1.135315 CAGGTTTTCAGCGGCGATG 59.865 57.895 20.57 20.57 0.00 3.84
89 90 0.605319 TTCAGGTTTTCAGCGGCGAT 60.605 50.000 12.98 0.00 0.00 4.58
90 91 0.816018 TTTCAGGTTTTCAGCGGCGA 60.816 50.000 12.98 0.00 0.00 5.54
91 92 0.660300 GTTTCAGGTTTTCAGCGGCG 60.660 55.000 0.51 0.51 0.00 6.46
92 93 0.318699 GGTTTCAGGTTTTCAGCGGC 60.319 55.000 0.00 0.00 0.00 6.53
93 94 0.313987 GGGTTTCAGGTTTTCAGCGG 59.686 55.000 0.00 0.00 0.00 5.52
94 95 1.318576 AGGGTTTCAGGTTTTCAGCG 58.681 50.000 0.00 0.00 0.00 5.18
95 96 2.229062 GCTAGGGTTTCAGGTTTTCAGC 59.771 50.000 0.00 0.00 0.00 4.26
96 97 2.820197 GGCTAGGGTTTCAGGTTTTCAG 59.180 50.000 0.00 0.00 0.00 3.02
97 98 2.490168 GGGCTAGGGTTTCAGGTTTTCA 60.490 50.000 0.00 0.00 0.00 2.69
98 99 2.168496 GGGCTAGGGTTTCAGGTTTTC 58.832 52.381 0.00 0.00 0.00 2.29
99 100 1.546998 CGGGCTAGGGTTTCAGGTTTT 60.547 52.381 0.00 0.00 0.00 2.43
100 101 0.037734 CGGGCTAGGGTTTCAGGTTT 59.962 55.000 0.00 0.00 0.00 3.27
101 102 0.838987 TCGGGCTAGGGTTTCAGGTT 60.839 55.000 0.00 0.00 0.00 3.50
102 103 1.229400 TCGGGCTAGGGTTTCAGGT 60.229 57.895 0.00 0.00 0.00 4.00
103 104 0.976073 TCTCGGGCTAGGGTTTCAGG 60.976 60.000 0.00 0.00 0.00 3.86
104 105 0.902531 TTCTCGGGCTAGGGTTTCAG 59.097 55.000 0.00 0.00 0.00 3.02
105 106 1.354101 TTTCTCGGGCTAGGGTTTCA 58.646 50.000 0.00 0.00 0.00 2.69
106 107 2.484742 TTTTCTCGGGCTAGGGTTTC 57.515 50.000 0.00 0.00 0.00 2.78
107 108 2.511659 GTTTTTCTCGGGCTAGGGTTT 58.488 47.619 0.00 0.00 0.00 3.27
108 109 1.609841 CGTTTTTCTCGGGCTAGGGTT 60.610 52.381 0.00 0.00 0.00 4.11
109 110 0.036671 CGTTTTTCTCGGGCTAGGGT 60.037 55.000 0.00 0.00 0.00 4.34
110 111 0.248289 TCGTTTTTCTCGGGCTAGGG 59.752 55.000 0.00 0.00 0.00 3.53
111 112 2.088950 TTCGTTTTTCTCGGGCTAGG 57.911 50.000 0.00 0.00 0.00 3.02
112 113 2.281762 CGATTCGTTTTTCTCGGGCTAG 59.718 50.000 0.00 0.00 0.00 3.42
113 114 2.264813 CGATTCGTTTTTCTCGGGCTA 58.735 47.619 0.00 0.00 0.00 3.93
114 115 1.076332 CGATTCGTTTTTCTCGGGCT 58.924 50.000 0.00 0.00 0.00 5.19
115 116 0.096454 CCGATTCGTTTTTCTCGGGC 59.904 55.000 5.20 0.00 45.30 6.13
118 119 3.059461 TCAAACCCGATTCGTTTTTCTCG 60.059 43.478 5.20 0.00 31.11 4.04
119 120 4.477302 TCAAACCCGATTCGTTTTTCTC 57.523 40.909 5.20 0.00 31.11 2.87
120 121 4.791734 GCTTCAAACCCGATTCGTTTTTCT 60.792 41.667 5.20 0.00 31.11 2.52
121 122 3.424198 GCTTCAAACCCGATTCGTTTTTC 59.576 43.478 5.20 0.00 31.11 2.29
122 123 3.067601 AGCTTCAAACCCGATTCGTTTTT 59.932 39.130 5.20 1.18 31.11 1.94
123 124 2.621526 AGCTTCAAACCCGATTCGTTTT 59.378 40.909 5.20 1.53 31.11 2.43
124 125 2.031157 CAGCTTCAAACCCGATTCGTTT 60.031 45.455 5.20 0.00 33.75 3.60
125 126 1.535462 CAGCTTCAAACCCGATTCGTT 59.465 47.619 5.20 0.00 0.00 3.85
126 127 1.156736 CAGCTTCAAACCCGATTCGT 58.843 50.000 5.20 0.00 0.00 3.85
127 128 0.447801 CCAGCTTCAAACCCGATTCG 59.552 55.000 0.00 0.00 0.00 3.34
128 129 0.171231 GCCAGCTTCAAACCCGATTC 59.829 55.000 0.00 0.00 0.00 2.52
129 130 1.250840 GGCCAGCTTCAAACCCGATT 61.251 55.000 0.00 0.00 0.00 3.34
130 131 1.678970 GGCCAGCTTCAAACCCGAT 60.679 57.895 0.00 0.00 0.00 4.18
131 132 2.282180 GGCCAGCTTCAAACCCGA 60.282 61.111 0.00 0.00 0.00 5.14
132 133 2.478335 TAGGGCCAGCTTCAAACCCG 62.478 60.000 6.18 0.00 45.75 5.28
133 134 0.251608 TTAGGGCCAGCTTCAAACCC 60.252 55.000 6.18 0.00 41.17 4.11
134 135 0.888619 GTTAGGGCCAGCTTCAAACC 59.111 55.000 6.18 0.00 0.00 3.27
135 136 1.813178 GAGTTAGGGCCAGCTTCAAAC 59.187 52.381 6.18 0.00 0.00 2.93
136 137 1.705186 AGAGTTAGGGCCAGCTTCAAA 59.295 47.619 6.18 0.00 0.00 2.69
137 138 1.279271 GAGAGTTAGGGCCAGCTTCAA 59.721 52.381 6.18 0.00 0.00 2.69
138 139 0.905357 GAGAGTTAGGGCCAGCTTCA 59.095 55.000 6.18 0.00 0.00 3.02
139 140 0.179234 GGAGAGTTAGGGCCAGCTTC 59.821 60.000 6.18 0.00 0.00 3.86
140 141 0.547712 TGGAGAGTTAGGGCCAGCTT 60.548 55.000 6.18 0.00 0.00 3.74
141 142 0.547712 TTGGAGAGTTAGGGCCAGCT 60.548 55.000 6.18 0.00 0.00 4.24
142 143 0.393132 GTTGGAGAGTTAGGGCCAGC 60.393 60.000 6.18 0.00 0.00 4.85
143 144 1.208293 GAGTTGGAGAGTTAGGGCCAG 59.792 57.143 6.18 0.00 0.00 4.85
144 145 1.276622 GAGTTGGAGAGTTAGGGCCA 58.723 55.000 6.18 0.00 0.00 5.36
145 146 1.276622 TGAGTTGGAGAGTTAGGGCC 58.723 55.000 0.00 0.00 0.00 5.80
146 147 2.615747 GGTTGAGTTGGAGAGTTAGGGC 60.616 54.545 0.00 0.00 0.00 5.19
147 148 2.637872 TGGTTGAGTTGGAGAGTTAGGG 59.362 50.000 0.00 0.00 0.00 3.53
148 149 3.557264 GGTGGTTGAGTTGGAGAGTTAGG 60.557 52.174 0.00 0.00 0.00 2.69
149 150 3.071023 TGGTGGTTGAGTTGGAGAGTTAG 59.929 47.826 0.00 0.00 0.00 2.34
150 151 3.042682 TGGTGGTTGAGTTGGAGAGTTA 58.957 45.455 0.00 0.00 0.00 2.24
151 152 1.843851 TGGTGGTTGAGTTGGAGAGTT 59.156 47.619 0.00 0.00 0.00 3.01
152 153 1.417890 CTGGTGGTTGAGTTGGAGAGT 59.582 52.381 0.00 0.00 0.00 3.24
153 154 1.694150 TCTGGTGGTTGAGTTGGAGAG 59.306 52.381 0.00 0.00 0.00 3.20
154 155 1.801242 TCTGGTGGTTGAGTTGGAGA 58.199 50.000 0.00 0.00 0.00 3.71
155 156 2.038952 TCATCTGGTGGTTGAGTTGGAG 59.961 50.000 0.00 0.00 0.00 3.86
156 157 2.054021 TCATCTGGTGGTTGAGTTGGA 58.946 47.619 0.00 0.00 0.00 3.53
157 158 2.154462 GTCATCTGGTGGTTGAGTTGG 58.846 52.381 0.00 0.00 0.00 3.77
158 159 1.800586 CGTCATCTGGTGGTTGAGTTG 59.199 52.381 0.00 0.00 0.00 3.16
159 160 1.878102 GCGTCATCTGGTGGTTGAGTT 60.878 52.381 0.00 0.00 0.00 3.01
160 161 0.320771 GCGTCATCTGGTGGTTGAGT 60.321 55.000 0.00 0.00 0.00 3.41
161 162 1.354337 CGCGTCATCTGGTGGTTGAG 61.354 60.000 0.00 0.00 0.00 3.02
162 163 1.374125 CGCGTCATCTGGTGGTTGA 60.374 57.895 0.00 0.00 0.00 3.18
163 164 3.027170 GCGCGTCATCTGGTGGTTG 62.027 63.158 8.43 0.00 0.00 3.77
164 165 2.742372 GCGCGTCATCTGGTGGTT 60.742 61.111 8.43 0.00 0.00 3.67
165 166 4.760047 GGCGCGTCATCTGGTGGT 62.760 66.667 5.47 0.00 0.00 4.16
166 167 4.758251 TGGCGCGTCATCTGGTGG 62.758 66.667 10.57 0.00 0.00 4.61
167 168 2.741985 TTGGCGCGTCATCTGGTG 60.742 61.111 16.97 0.00 0.00 4.17
168 169 2.434884 CTTGGCGCGTCATCTGGT 60.435 61.111 16.97 0.00 0.00 4.00
169 170 3.197790 CCTTGGCGCGTCATCTGG 61.198 66.667 16.97 13.99 0.00 3.86
170 171 2.125552 TCCTTGGCGCGTCATCTG 60.126 61.111 16.97 8.14 0.00 2.90
171 172 2.125512 GTCCTTGGCGCGTCATCT 60.126 61.111 16.97 0.00 0.00 2.90
172 173 3.554692 CGTCCTTGGCGCGTCATC 61.555 66.667 16.97 4.89 0.00 2.92
178 179 4.699522 ACTTCCCGTCCTTGGCGC 62.700 66.667 0.00 0.00 0.00 6.53
179 180 2.521958 ATCACTTCCCGTCCTTGGCG 62.522 60.000 0.00 0.00 0.00 5.69
180 181 1.026718 CATCACTTCCCGTCCTTGGC 61.027 60.000 0.00 0.00 0.00 4.52
181 182 1.026718 GCATCACTTCCCGTCCTTGG 61.027 60.000 0.00 0.00 0.00 3.61
182 183 0.036010 AGCATCACTTCCCGTCCTTG 60.036 55.000 0.00 0.00 0.00 3.61
183 184 1.482593 CTAGCATCACTTCCCGTCCTT 59.517 52.381 0.00 0.00 0.00 3.36
184 185 1.115467 CTAGCATCACTTCCCGTCCT 58.885 55.000 0.00 0.00 0.00 3.85
185 186 1.112113 TCTAGCATCACTTCCCGTCC 58.888 55.000 0.00 0.00 0.00 4.79
186 187 2.362397 TGATCTAGCATCACTTCCCGTC 59.638 50.000 0.00 0.00 0.00 4.79
187 188 2.101582 GTGATCTAGCATCACTTCCCGT 59.898 50.000 19.61 0.00 43.62 5.28
188 189 2.546795 GGTGATCTAGCATCACTTCCCG 60.547 54.545 23.06 0.00 45.60 5.14
189 190 2.224402 GGGTGATCTAGCATCACTTCCC 60.224 54.545 23.06 16.94 45.60 3.97
190 191 2.224402 GGGGTGATCTAGCATCACTTCC 60.224 54.545 23.06 20.83 45.60 3.46
191 192 2.703007 AGGGGTGATCTAGCATCACTTC 59.297 50.000 23.06 17.99 45.60 3.01
192 193 2.769209 AGGGGTGATCTAGCATCACTT 58.231 47.619 23.06 13.28 45.60 3.16
193 194 2.485966 AGGGGTGATCTAGCATCACT 57.514 50.000 23.06 7.23 45.60 3.41
194 195 4.689612 TTAAGGGGTGATCTAGCATCAC 57.310 45.455 19.09 19.09 45.59 3.06
195 196 4.907269 TGATTAAGGGGTGATCTAGCATCA 59.093 41.667 0.00 2.01 0.00 3.07
196 197 5.486526 CTGATTAAGGGGTGATCTAGCATC 58.513 45.833 0.00 0.00 0.00 3.91
197 198 4.263243 GCTGATTAAGGGGTGATCTAGCAT 60.263 45.833 0.00 0.00 32.04 3.79
198 199 3.071602 GCTGATTAAGGGGTGATCTAGCA 59.928 47.826 0.00 0.00 32.04 3.49
199 200 3.558109 GGCTGATTAAGGGGTGATCTAGC 60.558 52.174 0.00 0.00 31.49 3.42
200 201 3.008485 GGGCTGATTAAGGGGTGATCTAG 59.992 52.174 0.00 0.00 0.00 2.43
201 202 2.979678 GGGCTGATTAAGGGGTGATCTA 59.020 50.000 0.00 0.00 0.00 1.98
202 203 1.777272 GGGCTGATTAAGGGGTGATCT 59.223 52.381 0.00 0.00 0.00 2.75
203 204 1.543429 CGGGCTGATTAAGGGGTGATC 60.543 57.143 0.00 0.00 0.00 2.92
204 205 0.474184 CGGGCTGATTAAGGGGTGAT 59.526 55.000 0.00 0.00 0.00 3.06
205 206 0.619255 TCGGGCTGATTAAGGGGTGA 60.619 55.000 0.00 0.00 0.00 4.02
206 207 0.179045 CTCGGGCTGATTAAGGGGTG 60.179 60.000 0.00 0.00 0.00 4.61
207 208 1.984288 GCTCGGGCTGATTAAGGGGT 61.984 60.000 0.00 0.00 35.22 4.95
208 209 1.227973 GCTCGGGCTGATTAAGGGG 60.228 63.158 0.00 0.00 35.22 4.79
209 210 1.227973 GGCTCGGGCTGATTAAGGG 60.228 63.158 7.48 0.00 38.73 3.95
210 211 0.109342 ATGGCTCGGGCTGATTAAGG 59.891 55.000 7.48 0.00 38.73 2.69
211 212 1.202687 TGATGGCTCGGGCTGATTAAG 60.203 52.381 7.48 0.00 38.73 1.85
212 213 0.836606 TGATGGCTCGGGCTGATTAA 59.163 50.000 7.48 0.00 38.73 1.40
213 214 1.059098 ATGATGGCTCGGGCTGATTA 58.941 50.000 7.48 0.00 38.73 1.75
214 215 1.059098 TATGATGGCTCGGGCTGATT 58.941 50.000 7.48 0.00 38.73 2.57
215 216 1.059098 TTATGATGGCTCGGGCTGAT 58.941 50.000 7.48 0.00 38.73 2.90
216 217 1.002430 GATTATGATGGCTCGGGCTGA 59.998 52.381 7.48 0.00 38.73 4.26
217 218 1.446907 GATTATGATGGCTCGGGCTG 58.553 55.000 7.48 0.00 38.73 4.85
218 219 0.326264 GGATTATGATGGCTCGGGCT 59.674 55.000 7.48 0.00 38.73 5.19
219 220 1.021390 CGGATTATGATGGCTCGGGC 61.021 60.000 0.00 0.00 37.82 6.13
220 221 0.391661 CCGGATTATGATGGCTCGGG 60.392 60.000 0.00 0.00 33.27 5.14
221 222 0.391661 CCCGGATTATGATGGCTCGG 60.392 60.000 0.73 0.00 36.23 4.63
222 223 0.391661 CCCCGGATTATGATGGCTCG 60.392 60.000 0.73 0.00 0.00 5.03
223 224 0.035056 CCCCCGGATTATGATGGCTC 60.035 60.000 0.73 0.00 0.00 4.70
224 225 2.078452 CCCCCGGATTATGATGGCT 58.922 57.895 0.73 0.00 0.00 4.75
225 226 4.743018 CCCCCGGATTATGATGGC 57.257 61.111 0.73 0.00 0.00 4.40
240 241 2.849646 CCCTCCTCCGATTCCCCC 60.850 72.222 0.00 0.00 0.00 5.40
241 242 2.849646 CCCCTCCTCCGATTCCCC 60.850 72.222 0.00 0.00 0.00 4.81
242 243 1.839296 CTCCCCTCCTCCGATTCCC 60.839 68.421 0.00 0.00 0.00 3.97
243 244 1.839296 CCTCCCCTCCTCCGATTCC 60.839 68.421 0.00 0.00 0.00 3.01
244 245 0.187851 TACCTCCCCTCCTCCGATTC 59.812 60.000 0.00 0.00 0.00 2.52
245 246 0.640495 TTACCTCCCCTCCTCCGATT 59.360 55.000 0.00 0.00 0.00 3.34
246 247 0.188834 CTTACCTCCCCTCCTCCGAT 59.811 60.000 0.00 0.00 0.00 4.18
247 248 0.922738 TCTTACCTCCCCTCCTCCGA 60.923 60.000 0.00 0.00 0.00 4.55
248 249 0.468400 CTCTTACCTCCCCTCCTCCG 60.468 65.000 0.00 0.00 0.00 4.63
249 250 0.761323 GCTCTTACCTCCCCTCCTCC 60.761 65.000 0.00 0.00 0.00 4.30
250 251 0.263468 AGCTCTTACCTCCCCTCCTC 59.737 60.000 0.00 0.00 0.00 3.71
251 252 0.263468 GAGCTCTTACCTCCCCTCCT 59.737 60.000 6.43 0.00 0.00 3.69
252 253 1.110518 CGAGCTCTTACCTCCCCTCC 61.111 65.000 12.85 0.00 0.00 4.30
253 254 0.106619 TCGAGCTCTTACCTCCCCTC 60.107 60.000 12.85 0.00 0.00 4.30
254 255 0.396001 GTCGAGCTCTTACCTCCCCT 60.396 60.000 12.85 0.00 0.00 4.79
255 256 1.726533 CGTCGAGCTCTTACCTCCCC 61.727 65.000 12.85 0.00 0.00 4.81
256 257 0.747283 TCGTCGAGCTCTTACCTCCC 60.747 60.000 12.85 0.00 0.00 4.30
257 258 0.377905 GTCGTCGAGCTCTTACCTCC 59.622 60.000 12.85 0.00 0.00 4.30
258 259 0.026544 CGTCGTCGAGCTCTTACCTC 59.973 60.000 12.85 4.14 39.71 3.85
259 260 1.367599 CCGTCGTCGAGCTCTTACCT 61.368 60.000 12.85 0.00 39.71 3.08
260 261 1.062206 CCGTCGTCGAGCTCTTACC 59.938 63.158 12.85 0.00 39.71 2.85
261 262 0.167689 AACCGTCGTCGAGCTCTTAC 59.832 55.000 12.85 8.98 39.71 2.34
262 263 0.167470 CAACCGTCGTCGAGCTCTTA 59.833 55.000 12.85 0.00 39.71 2.10
263 264 1.081376 CAACCGTCGTCGAGCTCTT 60.081 57.895 12.85 0.00 39.71 2.85
264 265 2.561885 CAACCGTCGTCGAGCTCT 59.438 61.111 12.85 0.00 39.71 4.09
265 266 2.267681 ATCCAACCGTCGTCGAGCTC 62.268 60.000 2.73 2.73 39.71 4.09
266 267 2.267681 GATCCAACCGTCGTCGAGCT 62.268 60.000 2.98 0.00 39.71 4.09
267 268 1.872679 GATCCAACCGTCGTCGAGC 60.873 63.158 2.98 0.00 39.71 5.03
268 269 1.582937 CGATCCAACCGTCGTCGAG 60.583 63.158 2.98 0.00 39.71 4.04
269 270 2.481919 CGATCCAACCGTCGTCGA 59.518 61.111 2.98 0.00 39.71 4.20
270 271 3.245315 GCGATCCAACCGTCGTCG 61.245 66.667 0.00 0.00 39.87 5.12
271 272 2.884207 GGCGATCCAACCGTCGTC 60.884 66.667 0.00 0.00 39.87 4.20
272 273 3.687102 TGGCGATCCAACCGTCGT 61.687 61.111 0.00 0.00 39.99 4.34
273 274 3.186047 GTGGCGATCCAACCGTCG 61.186 66.667 0.00 0.00 45.53 5.12
274 275 2.818274 GGTGGCGATCCAACCGTC 60.818 66.667 0.00 0.00 44.47 4.79
278 279 4.090588 TCCCGGTGGCGATCCAAC 62.091 66.667 0.00 0.00 46.75 3.77
279 280 3.781307 CTCCCGGTGGCGATCCAA 61.781 66.667 0.00 0.00 45.53 3.53
280 281 4.770362 TCTCCCGGTGGCGATCCA 62.770 66.667 0.00 0.00 40.85 3.41
281 282 2.925162 CTTTCTCCCGGTGGCGATCC 62.925 65.000 0.00 0.00 0.00 3.36
282 283 1.521681 CTTTCTCCCGGTGGCGATC 60.522 63.158 0.00 0.00 0.00 3.69
283 284 2.584608 CTTTCTCCCGGTGGCGAT 59.415 61.111 0.00 0.00 0.00 4.58
284 285 4.388499 GCTTTCTCCCGGTGGCGA 62.388 66.667 0.00 0.00 0.00 5.54
285 286 4.697756 TGCTTTCTCCCGGTGGCG 62.698 66.667 0.00 0.00 0.00 5.69
286 287 1.460273 TTTTGCTTTCTCCCGGTGGC 61.460 55.000 0.00 0.00 0.00 5.01
287 288 0.313987 GTTTTGCTTTCTCCCGGTGG 59.686 55.000 0.00 0.00 0.00 4.61
288 289 0.313987 GGTTTTGCTTTCTCCCGGTG 59.686 55.000 0.00 0.00 0.00 4.94
289 290 0.826256 GGGTTTTGCTTTCTCCCGGT 60.826 55.000 0.00 0.00 0.00 5.28
290 291 0.539669 AGGGTTTTGCTTTCTCCCGG 60.540 55.000 0.00 0.00 42.57 5.73
291 292 2.084546 CTAGGGTTTTGCTTTCTCCCG 58.915 52.381 0.00 0.00 42.57 5.14
292 293 1.819288 GCTAGGGTTTTGCTTTCTCCC 59.181 52.381 0.00 0.00 38.50 4.30
293 294 2.796557 AGCTAGGGTTTTGCTTTCTCC 58.203 47.619 0.00 0.00 32.61 3.71
294 295 4.833390 TCTAGCTAGGGTTTTGCTTTCTC 58.167 43.478 20.58 0.00 38.15 2.87
295 296 4.323868 CCTCTAGCTAGGGTTTTGCTTTCT 60.324 45.833 19.37 0.00 38.15 2.52
296 297 3.942115 CCTCTAGCTAGGGTTTTGCTTTC 59.058 47.826 19.37 0.00 38.15 2.62
297 298 3.956744 CCTCTAGCTAGGGTTTTGCTTT 58.043 45.455 19.37 0.00 38.15 3.51
298 299 3.636153 CCTCTAGCTAGGGTTTTGCTT 57.364 47.619 19.37 0.00 38.15 3.91
307 308 2.158740 GGCCTTTTTCCCTCTAGCTAGG 60.159 54.545 20.58 8.30 36.30 3.02
308 309 2.158740 GGGCCTTTTTCCCTCTAGCTAG 60.159 54.545 15.01 15.01 40.66 3.42
309 310 1.844497 GGGCCTTTTTCCCTCTAGCTA 59.156 52.381 0.84 0.00 40.66 3.32
310 311 0.626382 GGGCCTTTTTCCCTCTAGCT 59.374 55.000 0.84 0.00 40.66 3.32
311 312 3.192799 GGGCCTTTTTCCCTCTAGC 57.807 57.895 0.84 0.00 40.66 3.42
317 318 0.904865 CTTCCCAGGGCCTTTTTCCC 60.905 60.000 1.32 0.00 44.25 3.97
318 319 0.114364 TCTTCCCAGGGCCTTTTTCC 59.886 55.000 1.32 0.00 0.00 3.13
319 320 1.895798 CTTCTTCCCAGGGCCTTTTTC 59.104 52.381 1.32 0.00 0.00 2.29
320 321 2.015456 CTTCTTCCCAGGGCCTTTTT 57.985 50.000 1.32 0.00 0.00 1.94
321 322 0.542938 GCTTCTTCCCAGGGCCTTTT 60.543 55.000 1.32 0.00 0.00 2.27
322 323 1.077445 GCTTCTTCCCAGGGCCTTT 59.923 57.895 1.32 0.00 0.00 3.11
323 324 1.729267 TTGCTTCTTCCCAGGGCCTT 61.729 55.000 1.32 0.00 0.00 4.35
324 325 2.162906 TTGCTTCTTCCCAGGGCCT 61.163 57.895 0.00 0.00 0.00 5.19
325 326 1.979155 GTTGCTTCTTCCCAGGGCC 60.979 63.158 0.00 0.00 0.00 5.80
326 327 0.613012 ATGTTGCTTCTTCCCAGGGC 60.613 55.000 0.00 0.00 0.00 5.19
327 328 2.806945 TATGTTGCTTCTTCCCAGGG 57.193 50.000 0.00 0.00 0.00 4.45
328 329 5.047092 ACATTTTATGTTGCTTCTTCCCAGG 60.047 40.000 0.00 0.00 41.63 4.45
329 330 6.029346 ACATTTTATGTTGCTTCTTCCCAG 57.971 37.500 0.00 0.00 41.63 4.45
367 368 9.349145 GGTTTTCAGTACGCATTTAACATTATT 57.651 29.630 0.00 0.00 0.00 1.40
368 369 8.516234 TGGTTTTCAGTACGCATTTAACATTAT 58.484 29.630 0.00 0.00 0.00 1.28
369 370 7.872881 TGGTTTTCAGTACGCATTTAACATTA 58.127 30.769 0.00 0.00 0.00 1.90
370 371 6.740110 TGGTTTTCAGTACGCATTTAACATT 58.260 32.000 0.00 0.00 0.00 2.71
371 372 6.320494 TGGTTTTCAGTACGCATTTAACAT 57.680 33.333 0.00 0.00 0.00 2.71
372 373 5.752892 TGGTTTTCAGTACGCATTTAACA 57.247 34.783 0.00 0.00 0.00 2.41
373 374 6.432107 TCTTGGTTTTCAGTACGCATTTAAC 58.568 36.000 0.00 0.00 0.00 2.01
374 375 6.621316 TCTTGGTTTTCAGTACGCATTTAA 57.379 33.333 0.00 0.00 0.00 1.52
375 376 6.621316 TTCTTGGTTTTCAGTACGCATTTA 57.379 33.333 0.00 0.00 0.00 1.40
376 377 5.508200 TTCTTGGTTTTCAGTACGCATTT 57.492 34.783 0.00 0.00 0.00 2.32
377 378 5.508200 TTTCTTGGTTTTCAGTACGCATT 57.492 34.783 0.00 0.00 0.00 3.56
378 379 5.508200 TTTTCTTGGTTTTCAGTACGCAT 57.492 34.783 0.00 0.00 0.00 4.73
379 380 4.966965 TTTTCTTGGTTTTCAGTACGCA 57.033 36.364 0.00 0.00 0.00 5.24
380 381 6.474102 TCAATTTTTCTTGGTTTTCAGTACGC 59.526 34.615 0.00 0.00 0.00 4.42
381 382 7.979115 TCAATTTTTCTTGGTTTTCAGTACG 57.021 32.000 0.00 0.00 0.00 3.67
414 415 9.549078 TGGTTTTTCTTGTTCTTTGTTTACTTT 57.451 25.926 0.00 0.00 0.00 2.66
415 416 9.549078 TTGGTTTTTCTTGTTCTTTGTTTACTT 57.451 25.926 0.00 0.00 0.00 2.24
416 417 9.549078 TTTGGTTTTTCTTGTTCTTTGTTTACT 57.451 25.926 0.00 0.00 0.00 2.24
417 418 9.805966 CTTTGGTTTTTCTTGTTCTTTGTTTAC 57.194 29.630 0.00 0.00 0.00 2.01
418 419 9.765795 TCTTTGGTTTTTCTTGTTCTTTGTTTA 57.234 25.926 0.00 0.00 0.00 2.01
419 420 8.669946 TCTTTGGTTTTTCTTGTTCTTTGTTT 57.330 26.923 0.00 0.00 0.00 2.83
420 421 8.669946 TTCTTTGGTTTTTCTTGTTCTTTGTT 57.330 26.923 0.00 0.00 0.00 2.83
421 422 8.669946 TTTCTTTGGTTTTTCTTGTTCTTTGT 57.330 26.923 0.00 0.00 0.00 2.83
422 423 9.381027 GTTTTCTTTGGTTTTTCTTGTTCTTTG 57.619 29.630 0.00 0.00 0.00 2.77
423 424 8.564574 GGTTTTCTTTGGTTTTTCTTGTTCTTT 58.435 29.630 0.00 0.00 0.00 2.52
424 425 7.717436 TGGTTTTCTTTGGTTTTTCTTGTTCTT 59.283 29.630 0.00 0.00 0.00 2.52
425 426 7.220740 TGGTTTTCTTTGGTTTTTCTTGTTCT 58.779 30.769 0.00 0.00 0.00 3.01
426 427 7.428282 TGGTTTTCTTTGGTTTTTCTTGTTC 57.572 32.000 0.00 0.00 0.00 3.18
427 428 7.717436 TCTTGGTTTTCTTTGGTTTTTCTTGTT 59.283 29.630 0.00 0.00 0.00 2.83
428 429 7.220740 TCTTGGTTTTCTTTGGTTTTTCTTGT 58.779 30.769 0.00 0.00 0.00 3.16
429 430 7.665561 TCTTGGTTTTCTTTGGTTTTTCTTG 57.334 32.000 0.00 0.00 0.00 3.02
430 431 8.684386 TTTCTTGGTTTTCTTTGGTTTTTCTT 57.316 26.923 0.00 0.00 0.00 2.52
431 432 8.154203 TCTTTCTTGGTTTTCTTTGGTTTTTCT 58.846 29.630 0.00 0.00 0.00 2.52
432 433 8.317891 TCTTTCTTGGTTTTCTTTGGTTTTTC 57.682 30.769 0.00 0.00 0.00 2.29
433 434 8.684386 TTCTTTCTTGGTTTTCTTTGGTTTTT 57.316 26.923 0.00 0.00 0.00 1.94
434 435 8.564574 GTTTCTTTCTTGGTTTTCTTTGGTTTT 58.435 29.630 0.00 0.00 0.00 2.43
435 436 7.717436 TGTTTCTTTCTTGGTTTTCTTTGGTTT 59.283 29.630 0.00 0.00 0.00 3.27
436 437 7.220740 TGTTTCTTTCTTGGTTTTCTTTGGTT 58.779 30.769 0.00 0.00 0.00 3.67
437 438 6.764379 TGTTTCTTTCTTGGTTTTCTTTGGT 58.236 32.000 0.00 0.00 0.00 3.67
438 439 7.096551 TCTGTTTCTTTCTTGGTTTTCTTTGG 58.903 34.615 0.00 0.00 0.00 3.28
439 440 8.532977 TTCTGTTTCTTTCTTGGTTTTCTTTG 57.467 30.769 0.00 0.00 0.00 2.77
440 441 9.554395 TTTTCTGTTTCTTTCTTGGTTTTCTTT 57.446 25.926 0.00 0.00 0.00 2.52
441 442 9.554395 TTTTTCTGTTTCTTTCTTGGTTTTCTT 57.446 25.926 0.00 0.00 0.00 2.52
489 490 4.719273 TCTCCCTGGTTTTCATTGGTTTTT 59.281 37.500 0.00 0.00 0.00 1.94
490 491 4.294347 TCTCCCTGGTTTTCATTGGTTTT 58.706 39.130 0.00 0.00 0.00 2.43
491 492 3.922375 TCTCCCTGGTTTTCATTGGTTT 58.078 40.909 0.00 0.00 0.00 3.27
492 493 3.611025 TCTCCCTGGTTTTCATTGGTT 57.389 42.857 0.00 0.00 0.00 3.67
493 494 3.611025 TTCTCCCTGGTTTTCATTGGT 57.389 42.857 0.00 0.00 0.00 3.67
494 495 3.640967 TGTTTCTCCCTGGTTTTCATTGG 59.359 43.478 0.00 0.00 0.00 3.16
495 496 4.935352 TGTTTCTCCCTGGTTTTCATTG 57.065 40.909 0.00 0.00 0.00 2.82
496 497 5.660864 TCTTTGTTTCTCCCTGGTTTTCATT 59.339 36.000 0.00 0.00 0.00 2.57
497 498 5.208121 TCTTTGTTTCTCCCTGGTTTTCAT 58.792 37.500 0.00 0.00 0.00 2.57
498 499 4.605183 TCTTTGTTTCTCCCTGGTTTTCA 58.395 39.130 0.00 0.00 0.00 2.69
499 500 5.592104 TTCTTTGTTTCTCCCTGGTTTTC 57.408 39.130 0.00 0.00 0.00 2.29
500 501 6.170506 GTTTTCTTTGTTTCTCCCTGGTTTT 58.829 36.000 0.00 0.00 0.00 2.43
501 502 5.338056 GGTTTTCTTTGTTTCTCCCTGGTTT 60.338 40.000 0.00 0.00 0.00 3.27
502 503 4.161565 GGTTTTCTTTGTTTCTCCCTGGTT 59.838 41.667 0.00 0.00 0.00 3.67
503 504 3.704566 GGTTTTCTTTGTTTCTCCCTGGT 59.295 43.478 0.00 0.00 0.00 4.00
504 505 3.243401 CGGTTTTCTTTGTTTCTCCCTGG 60.243 47.826 0.00 0.00 0.00 4.45
505 506 3.243401 CCGGTTTTCTTTGTTTCTCCCTG 60.243 47.826 0.00 0.00 0.00 4.45
506 507 2.956333 CCGGTTTTCTTTGTTTCTCCCT 59.044 45.455 0.00 0.00 0.00 4.20
507 508 2.691526 ACCGGTTTTCTTTGTTTCTCCC 59.308 45.455 0.00 0.00 0.00 4.30
508 509 4.023450 CCTACCGGTTTTCTTTGTTTCTCC 60.023 45.833 15.04 0.00 0.00 3.71
509 510 4.818005 TCCTACCGGTTTTCTTTGTTTCTC 59.182 41.667 15.04 0.00 0.00 2.87
510 511 4.784177 TCCTACCGGTTTTCTTTGTTTCT 58.216 39.130 15.04 0.00 0.00 2.52
511 512 4.556104 GCTCCTACCGGTTTTCTTTGTTTC 60.556 45.833 15.04 0.00 0.00 2.78
512 513 3.317149 GCTCCTACCGGTTTTCTTTGTTT 59.683 43.478 15.04 0.00 0.00 2.83
513 514 2.882761 GCTCCTACCGGTTTTCTTTGTT 59.117 45.455 15.04 0.00 0.00 2.83
514 515 2.501261 GCTCCTACCGGTTTTCTTTGT 58.499 47.619 15.04 0.00 0.00 2.83
515 516 1.810755 GGCTCCTACCGGTTTTCTTTG 59.189 52.381 15.04 0.00 0.00 2.77
516 517 1.422402 TGGCTCCTACCGGTTTTCTTT 59.578 47.619 15.04 0.00 0.00 2.52
517 518 1.061546 TGGCTCCTACCGGTTTTCTT 58.938 50.000 15.04 0.00 0.00 2.52
518 519 1.286248 ATGGCTCCTACCGGTTTTCT 58.714 50.000 15.04 0.00 0.00 2.52
519 520 2.124277 AATGGCTCCTACCGGTTTTC 57.876 50.000 15.04 0.00 0.00 2.29
520 521 3.724732 TTAATGGCTCCTACCGGTTTT 57.275 42.857 15.04 0.00 0.00 2.43
521 522 3.724732 TTTAATGGCTCCTACCGGTTT 57.275 42.857 15.04 0.00 0.00 3.27
522 523 3.724732 TTTTAATGGCTCCTACCGGTT 57.275 42.857 15.04 0.00 0.00 4.44
523 524 3.724732 TTTTTAATGGCTCCTACCGGT 57.275 42.857 13.98 13.98 0.00 5.28
524 525 6.894339 ATTATTTTTAATGGCTCCTACCGG 57.106 37.500 0.00 0.00 0.00 5.28
525 526 7.936584 TCAATTATTTTTAATGGCTCCTACCG 58.063 34.615 0.00 0.00 0.00 4.02
528 529 9.796120 CGTTTCAATTATTTTTAATGGCTCCTA 57.204 29.630 0.00 0.00 0.00 2.94
529 530 8.527810 TCGTTTCAATTATTTTTAATGGCTCCT 58.472 29.630 0.00 0.00 0.00 3.69
530 531 8.696410 TCGTTTCAATTATTTTTAATGGCTCC 57.304 30.769 0.00 0.00 0.00 4.70
532 533 9.868277 TCATCGTTTCAATTATTTTTAATGGCT 57.132 25.926 0.00 0.00 0.00 4.75
559 560 5.462729 ACGTTTCTCCGTTGTTTTTGTTTTT 59.537 32.000 0.00 0.00 37.96 1.94
560 561 4.983538 ACGTTTCTCCGTTGTTTTTGTTTT 59.016 33.333 0.00 0.00 37.96 2.43
561 562 4.548494 ACGTTTCTCCGTTGTTTTTGTTT 58.452 34.783 0.00 0.00 37.96 2.83
562 563 4.163458 ACGTTTCTCCGTTGTTTTTGTT 57.837 36.364 0.00 0.00 37.96 2.83
563 564 3.835378 ACGTTTCTCCGTTGTTTTTGT 57.165 38.095 0.00 0.00 37.96 2.83
564 565 6.022821 TCTTTACGTTTCTCCGTTGTTTTTG 58.977 36.000 0.00 0.00 42.00 2.44
565 566 6.180771 TCTTTACGTTTCTCCGTTGTTTTT 57.819 33.333 0.00 0.00 42.00 1.94
566 567 5.799681 TCTTTACGTTTCTCCGTTGTTTT 57.200 34.783 0.00 0.00 42.00 2.43
567 568 5.996669 ATCTTTACGTTTCTCCGTTGTTT 57.003 34.783 0.00 0.00 42.00 2.83
568 569 7.011295 TGTTTATCTTTACGTTTCTCCGTTGTT 59.989 33.333 0.00 0.00 42.00 2.83
569 570 6.479660 TGTTTATCTTTACGTTTCTCCGTTGT 59.520 34.615 0.00 0.00 42.00 3.32
570 571 6.879962 TGTTTATCTTTACGTTTCTCCGTTG 58.120 36.000 0.00 0.00 42.00 4.10
571 572 7.481275 TTGTTTATCTTTACGTTTCTCCGTT 57.519 32.000 0.00 0.00 42.00 4.44
572 573 7.481275 TTTGTTTATCTTTACGTTTCTCCGT 57.519 32.000 0.00 0.00 44.50 4.69
573 574 8.277713 TCTTTTGTTTATCTTTACGTTTCTCCG 58.722 33.333 0.00 0.00 0.00 4.63
574 575 9.940166 TTCTTTTGTTTATCTTTACGTTTCTCC 57.060 29.630 0.00 0.00 0.00 3.71
1080 1113 1.440893 CCAGCAGAGTCCGATCAGG 59.559 63.158 0.00 0.00 42.97 3.86
1493 1526 0.663688 CTCCTCCGTGTACATCCTCG 59.336 60.000 0.00 0.00 0.00 4.63
1499 1532 1.606601 AGCTGCTCCTCCGTGTACA 60.607 57.895 0.00 0.00 0.00 2.90
1992 2025 1.584380 GAAGCAGCAGGACAGGCAAG 61.584 60.000 0.00 0.00 0.00 4.01
2061 2094 8.607713 TGAAATTTGTACTCATAAGGGTAGGAA 58.392 33.333 0.00 0.00 0.00 3.36
2077 2110 4.401519 TCCACGTTGGGTTTGAAATTTGTA 59.598 37.500 0.00 0.00 38.32 2.41
2510 2543 3.041701 CCATGTGTGTGCACCCAC 58.958 61.111 23.53 23.53 44.65 4.61
2552 2585 7.060289 CACAATCAAGACTGAATTTGACATTCG 59.940 37.037 0.00 0.00 36.26 3.34
2742 2775 7.412853 GGATGTGTAGATGATTGTTTGATGAC 58.587 38.462 0.00 0.00 0.00 3.06
2748 2781 4.843728 ACCGGATGTGTAGATGATTGTTT 58.156 39.130 9.46 0.00 0.00 2.83
2861 2900 2.372264 AGTGGCAGGCATTCATTAGTG 58.628 47.619 0.00 0.00 0.00 2.74
2902 2941 1.731720 AGAATCTGCAGAACTTCGGC 58.268 50.000 22.50 6.93 38.08 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.