Multiple sequence alignment - TraesCS3D01G196500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G196500 chr3D 100.000 7351 0 0 1 7351 197990422 197997772 0.000000e+00 13575.0
1 TraesCS3D01G196500 chr3D 83.871 589 73 20 1 576 486698477 486699056 6.490000e-150 542.0
2 TraesCS3D01G196500 chr3D 92.174 115 5 3 3966 4078 292887741 292887853 7.630000e-35 159.0
3 TraesCS3D01G196500 chr3D 83.871 93 11 4 5238 5328 19320550 19320640 1.310000e-12 86.1
4 TraesCS3D01G196500 chr3D 86.207 58 8 0 5209 5266 589730336 589730393 6.160000e-06 63.9
5 TraesCS3D01G196500 chr3A 98.174 2958 49 4 3072 6025 314623001 314625957 0.000000e+00 5158.0
6 TraesCS3D01G196500 chr3A 95.691 1787 53 5 1211 2983 314614261 314616037 0.000000e+00 2852.0
7 TraesCS3D01G196500 chr3A 97.429 700 13 5 6007 6704 314625983 314626679 0.000000e+00 1188.0
8 TraesCS3D01G196500 chr3A 94.183 361 13 2 6687 7047 314626956 314627308 1.800000e-150 544.0
9 TraesCS3D01G196500 chr3A 92.150 293 21 2 7061 7351 614237216 614236924 5.310000e-111 412.0
10 TraesCS3D01G196500 chr3A 95.794 214 6 2 962 1173 314614048 314614260 7.060000e-90 342.0
11 TraesCS3D01G196500 chr3A 90.821 207 7 3 785 989 314613851 314614047 4.370000e-67 267.0
12 TraesCS3D01G196500 chr3A 88.172 186 16 5 3556 3737 633772705 633772522 4.470000e-52 217.0
13 TraesCS3D01G196500 chr3A 86.772 189 21 3 3555 3740 176044030 176043843 2.690000e-49 207.0
14 TraesCS3D01G196500 chr3B 97.670 2361 37 5 4150 6494 322720588 322722946 0.000000e+00 4039.0
15 TraesCS3D01G196500 chr3B 95.827 2013 62 11 908 2901 322708476 322710485 0.000000e+00 3232.0
16 TraesCS3D01G196500 chr3B 95.083 1078 23 13 2896 3971 322719481 322720530 0.000000e+00 1670.0
17 TraesCS3D01G196500 chr3B 94.417 412 10 4 6643 7052 322723428 322723828 8.100000e-174 621.0
18 TraesCS3D01G196500 chr3B 93.636 110 7 0 3963 4072 616774389 616774498 1.640000e-36 165.0
19 TraesCS3D01G196500 chr3B 94.805 77 4 0 5157 5233 322721630 322721706 3.600000e-23 121.0
20 TraesCS3D01G196500 chr3B 96.923 65 1 1 6582 6646 322723107 322723170 2.800000e-19 108.0
21 TraesCS3D01G196500 chr1D 86.067 567 70 8 1 562 371152577 371153139 1.060000e-167 601.0
22 TraesCS3D01G196500 chr1D 83.860 570 77 14 1 560 422330824 422330260 5.050000e-146 529.0
23 TraesCS3D01G196500 chr7A 86.257 553 60 15 1 543 690357324 690357870 2.950000e-163 586.0
24 TraesCS3D01G196500 chr7A 87.634 186 19 3 3555 3737 165806491 165806675 5.780000e-51 213.0
25 TraesCS3D01G196500 chr7A 87.736 106 7 3 6907 7008 277728227 277728330 1.300000e-22 119.0
26 TraesCS3D01G196500 chr7A 91.379 58 4 1 5209 5266 675124895 675124839 2.200000e-10 78.7
27 TraesCS3D01G196500 chr7A 95.455 44 2 0 5175 5218 26104882 26104839 3.680000e-08 71.3
28 TraesCS3D01G196500 chr4A 84.615 572 72 14 1 562 617830205 617829640 8.330000e-154 555.0
29 TraesCS3D01G196500 chr4D 84.495 574 70 18 1 562 305236959 305237525 3.880000e-152 549.0
30 TraesCS3D01G196500 chr5D 84.238 571 73 16 1 562 508598137 508598699 2.330000e-149 540.0
31 TraesCS3D01G196500 chr5D 84.146 574 69 17 1 562 421201080 421201643 3.020000e-148 536.0
32 TraesCS3D01G196500 chr5D 87.097 186 19 5 3555 3737 541684414 541684597 9.670000e-49 206.0
33 TraesCS3D01G196500 chr5D 96.190 105 4 0 3961 4065 202429539 202429435 9.810000e-39 172.0
34 TraesCS3D01G196500 chr4B 83.831 569 78 14 1 562 287243670 287243109 5.050000e-146 529.0
35 TraesCS3D01G196500 chr4B 93.860 114 4 3 3962 4073 28147540 28147652 1.270000e-37 169.0
36 TraesCS3D01G196500 chr5A 92.177 294 22 1 7055 7347 549101075 549100782 1.480000e-111 414.0
37 TraesCS3D01G196500 chr5A 94.397 232 12 1 7053 7283 549094769 549094538 9.070000e-94 355.0
38 TraesCS3D01G196500 chr5A 88.276 290 33 1 7060 7348 506656705 506656994 5.460000e-91 346.0
39 TraesCS3D01G196500 chr5A 89.524 210 21 1 7074 7282 506797087 506797296 1.570000e-66 265.0
40 TraesCS3D01G196500 chr7B 91.096 292 25 1 7061 7351 64567863 64567572 1.920000e-105 394.0
41 TraesCS3D01G196500 chr5B 87.302 189 20 3 3555 3740 710640175 710639988 5.780000e-51 213.0
42 TraesCS3D01G196500 chr5B 94.231 104 5 1 3962 4065 474772785 474772887 2.750000e-34 158.0
43 TraesCS3D01G196500 chr5B 83.838 99 12 3 5205 5300 427335142 427335045 2.820000e-14 91.6
44 TraesCS3D01G196500 chr2A 87.634 186 19 3 3555 3737 208555846 208556030 5.780000e-51 213.0
45 TraesCS3D01G196500 chr2A 91.129 124 8 3 3963 4084 68155927 68155805 1.640000e-36 165.0
46 TraesCS3D01G196500 chr2A 87.719 57 7 0 5209 5265 57841771 57841715 4.760000e-07 67.6
47 TraesCS3D01G196500 chr6A 87.097 186 20 3 3555 3737 189554041 189554225 2.690000e-49 207.0
48 TraesCS3D01G196500 chr6A 87.302 63 8 0 5204 5266 597048888 597048950 1.020000e-08 73.1
49 TraesCS3D01G196500 chr2D 96.078 102 4 0 3969 4070 445894884 445894985 4.560000e-37 167.0
50 TraesCS3D01G196500 chr2D 90.909 55 4 1 5169 5223 563307430 563307483 1.020000e-08 73.1
51 TraesCS3D01G196500 chr1A 96.040 101 4 0 3969 4069 351606858 351606758 1.640000e-36 165.0
52 TraesCS3D01G196500 chr1A 86.207 58 8 0 5209 5266 345794367 345794310 6.160000e-06 63.9
53 TraesCS3D01G196500 chr6D 90.625 64 4 2 7053 7116 273188257 273188318 4.730000e-12 84.2
54 TraesCS3D01G196500 chr6D 89.231 65 5 2 7053 7117 273212035 273212097 6.110000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G196500 chr3D 197990422 197997772 7350 False 13575.000000 13575 100.000000 1 7351 1 chr3D.!!$F2 7350
1 TraesCS3D01G196500 chr3D 486698477 486699056 579 False 542.000000 542 83.871000 1 576 1 chr3D.!!$F4 575
2 TraesCS3D01G196500 chr3A 314623001 314627308 4307 False 2296.666667 5158 96.595333 3072 7047 3 chr3A.!!$F2 3975
3 TraesCS3D01G196500 chr3A 314613851 314616037 2186 False 1153.666667 2852 94.102000 785 2983 3 chr3A.!!$F1 2198
4 TraesCS3D01G196500 chr3B 322708476 322710485 2009 False 3232.000000 3232 95.827000 908 2901 1 chr3B.!!$F1 1993
5 TraesCS3D01G196500 chr3B 322719481 322723828 4347 False 1311.800000 4039 95.779600 2896 7052 5 chr3B.!!$F3 4156
6 TraesCS3D01G196500 chr1D 371152577 371153139 562 False 601.000000 601 86.067000 1 562 1 chr1D.!!$F1 561
7 TraesCS3D01G196500 chr1D 422330260 422330824 564 True 529.000000 529 83.860000 1 560 1 chr1D.!!$R1 559
8 TraesCS3D01G196500 chr7A 690357324 690357870 546 False 586.000000 586 86.257000 1 543 1 chr7A.!!$F3 542
9 TraesCS3D01G196500 chr4A 617829640 617830205 565 True 555.000000 555 84.615000 1 562 1 chr4A.!!$R1 561
10 TraesCS3D01G196500 chr4D 305236959 305237525 566 False 549.000000 549 84.495000 1 562 1 chr4D.!!$F1 561
11 TraesCS3D01G196500 chr5D 508598137 508598699 562 False 540.000000 540 84.238000 1 562 1 chr5D.!!$F2 561
12 TraesCS3D01G196500 chr5D 421201080 421201643 563 False 536.000000 536 84.146000 1 562 1 chr5D.!!$F1 561
13 TraesCS3D01G196500 chr4B 287243109 287243670 561 True 529.000000 529 83.831000 1 562 1 chr4B.!!$R1 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
733 752 0.040425 GCTGTTTGGCCGTACAACTG 60.040 55.000 10.54 9.43 0.00 3.16 F
739 758 0.466543 TGGCCGTACAACTGACAACT 59.533 50.000 0.00 0.00 0.00 3.16 F
741 760 0.782384 GCCGTACAACTGACAACTCG 59.218 55.000 0.00 0.00 0.00 4.18 F
2259 2325 0.179089 CTTCTCCTGTCGGCCATGAG 60.179 60.000 2.24 0.28 37.22 2.90 F
2792 2858 1.612726 CCTCCAGGACAAGCTTCTTGG 60.613 57.143 9.73 9.73 42.79 3.61 F
3097 3163 1.078143 AAGAAGGCGATGCTCACCC 60.078 57.895 0.00 0.00 0.00 4.61 F
3504 3571 1.207089 CCTTGATGTAACTCGGGCTCA 59.793 52.381 0.00 0.00 0.00 4.26 F
3595 3662 2.011617 GCTTGGGGTCTATGGGCCAT 62.012 60.000 24.69 24.69 0.00 4.40 F
4078 4146 5.193679 GGAGGGAGTACTAAATTGTGCATT 58.806 41.667 0.00 0.00 0.00 3.56 F
5618 5690 3.327757 TGTTTCTGCTGGTTAGATGTCCT 59.672 43.478 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1822 1888 0.665298 GATCGAGCAAATGGGAAGCC 59.335 55.000 0.00 0.0 0.00 4.35 R
2249 2315 1.447838 GCGAGTTTCTCATGGCCGA 60.448 57.895 0.00 0.0 0.00 5.54 R
2574 2640 2.433868 TTGAAAACTCTCCTCGACCG 57.566 50.000 0.00 0.0 0.00 4.79 R
3068 3134 0.245539 CGCCTTCTTCCACCTAACGA 59.754 55.000 0.00 0.0 0.00 3.85 R
4078 4146 2.239654 CCCAGCAAAATAGGACTCTGGA 59.760 50.000 7.58 0.0 42.64 3.86 R
4755 4823 2.666272 TGTTGTACCATGCCCTTTGA 57.334 45.000 0.00 0.0 0.00 2.69 R
5182 5253 1.180456 TGCCCACCTCAACATGCAAG 61.180 55.000 0.00 0.0 0.00 4.01 R
5618 5690 4.351407 TCCAGGGGTAAGTTCAATGTACAA 59.649 41.667 0.00 0.0 0.00 2.41 R
5645 5717 1.287503 GAATTCCCGTTTTGGCGCA 59.712 52.632 10.83 0.0 35.87 6.09 R
7219 7965 0.039074 CTCTTTCTCACTCGTGCGGT 60.039 55.000 0.00 0.0 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 98 5.657826 TTGGATCTCTCTCTGTTCTCTTG 57.342 43.478 0.00 0.00 0.00 3.02
93 101 5.650266 TGGATCTCTCTCTGTTCTCTTGTAC 59.350 44.000 0.00 0.00 0.00 2.90
135 145 4.149221 GGCCGAAAACCGTTTCTTAAATTG 59.851 41.667 0.00 0.00 40.94 2.32
140 150 4.776795 AACCGTTTCTTAAATTGCCGAT 57.223 36.364 0.00 0.00 0.00 4.18
141 151 5.883503 AACCGTTTCTTAAATTGCCGATA 57.116 34.783 0.00 0.00 0.00 2.92
159 169 4.320714 CCGATAATCCGTAACTCCGATTGA 60.321 45.833 0.00 0.00 0.00 2.57
176 186 5.572896 CCGATTGAGCTGAAATTTTAACACC 59.427 40.000 0.00 0.00 0.00 4.16
236 250 1.304134 CCAACCACCTTACAGGGGC 60.304 63.158 0.00 0.00 37.50 5.80
267 283 1.149174 CCAAGCGCATCCTGGGTAT 59.851 57.895 11.47 0.00 32.36 2.73
301 317 3.072476 GCTTGTGGGCCTCTCAGA 58.928 61.111 4.53 0.00 0.00 3.27
414 431 9.645059 TTTGATATGGATATTTTGCGAAACAAA 57.355 25.926 0.00 2.07 46.51 2.83
446 463 5.278463 GCAACAAATATGAACTGACACTGGT 60.278 40.000 0.00 0.00 0.00 4.00
528 547 9.825972 AAAGTTGTAGAATATTGACATGAAACG 57.174 29.630 0.00 0.00 0.00 3.60
571 590 4.124851 GGAGACGTATCATTCACCTTGT 57.875 45.455 12.92 0.00 0.00 3.16
572 591 3.865745 GGAGACGTATCATTCACCTTGTG 59.134 47.826 12.92 0.00 34.45 3.33
573 592 3.861840 AGACGTATCATTCACCTTGTGG 58.138 45.455 0.00 0.00 39.83 4.17
575 594 4.000988 GACGTATCATTCACCTTGTGGTT 58.999 43.478 0.00 0.00 46.05 3.67
576 595 4.394729 ACGTATCATTCACCTTGTGGTTT 58.605 39.130 0.00 0.00 46.05 3.27
577 596 4.825085 ACGTATCATTCACCTTGTGGTTTT 59.175 37.500 0.00 0.00 46.05 2.43
578 597 5.300792 ACGTATCATTCACCTTGTGGTTTTT 59.699 36.000 0.00 0.00 46.05 1.94
579 598 5.856455 CGTATCATTCACCTTGTGGTTTTTC 59.144 40.000 0.00 0.00 46.05 2.29
580 599 5.867903 ATCATTCACCTTGTGGTTTTTCA 57.132 34.783 0.00 0.00 46.05 2.69
581 600 5.004922 TCATTCACCTTGTGGTTTTTCAC 57.995 39.130 0.00 0.00 46.05 3.18
582 601 3.495670 TTCACCTTGTGGTTTTTCACG 57.504 42.857 0.00 0.00 46.05 4.35
583 602 2.438411 TCACCTTGTGGTTTTTCACGT 58.562 42.857 0.00 0.00 46.05 4.49
584 603 2.820787 TCACCTTGTGGTTTTTCACGTT 59.179 40.909 0.00 0.00 46.05 3.99
585 604 3.256136 TCACCTTGTGGTTTTTCACGTTT 59.744 39.130 0.00 0.00 46.05 3.60
586 605 3.991121 CACCTTGTGGTTTTTCACGTTTT 59.009 39.130 0.00 0.00 46.05 2.43
587 606 4.090786 CACCTTGTGGTTTTTCACGTTTTC 59.909 41.667 0.00 0.00 46.05 2.29
588 607 3.615056 CCTTGTGGTTTTTCACGTTTTCC 59.385 43.478 0.00 0.00 40.31 3.13
589 608 4.490743 CTTGTGGTTTTTCACGTTTTCCT 58.509 39.130 0.00 0.00 40.31 3.36
590 609 3.839293 TGTGGTTTTTCACGTTTTCCTG 58.161 40.909 0.00 0.00 40.31 3.86
591 610 3.256136 TGTGGTTTTTCACGTTTTCCTGT 59.744 39.130 0.00 0.00 40.31 4.00
592 611 4.239304 GTGGTTTTTCACGTTTTCCTGTT 58.761 39.130 0.00 0.00 0.00 3.16
593 612 4.090786 GTGGTTTTTCACGTTTTCCTGTTG 59.909 41.667 0.00 0.00 0.00 3.33
594 613 4.239304 GGTTTTTCACGTTTTCCTGTTGT 58.761 39.130 0.00 0.00 0.00 3.32
595 614 4.090786 GGTTTTTCACGTTTTCCTGTTGTG 59.909 41.667 0.00 0.00 0.00 3.33
596 615 4.506886 TTTTCACGTTTTCCTGTTGTGT 57.493 36.364 0.00 0.00 32.55 3.72
597 616 4.506886 TTTCACGTTTTCCTGTTGTGTT 57.493 36.364 0.00 0.00 32.55 3.32
598 617 3.750639 TCACGTTTTCCTGTTGTGTTC 57.249 42.857 0.00 0.00 32.55 3.18
599 618 3.340034 TCACGTTTTCCTGTTGTGTTCT 58.660 40.909 0.00 0.00 32.55 3.01
600 619 3.754323 TCACGTTTTCCTGTTGTGTTCTT 59.246 39.130 0.00 0.00 32.55 2.52
601 620 4.095610 CACGTTTTCCTGTTGTGTTCTTC 58.904 43.478 0.00 0.00 0.00 2.87
602 621 3.181514 ACGTTTTCCTGTTGTGTTCTTCG 60.182 43.478 0.00 0.00 0.00 3.79
603 622 3.181514 CGTTTTCCTGTTGTGTTCTTCGT 60.182 43.478 0.00 0.00 0.00 3.85
604 623 4.095610 GTTTTCCTGTTGTGTTCTTCGTG 58.904 43.478 0.00 0.00 0.00 4.35
605 624 2.684001 TCCTGTTGTGTTCTTCGTGT 57.316 45.000 0.00 0.00 0.00 4.49
606 625 2.980568 TCCTGTTGTGTTCTTCGTGTT 58.019 42.857 0.00 0.00 0.00 3.32
607 626 2.933906 TCCTGTTGTGTTCTTCGTGTTC 59.066 45.455 0.00 0.00 0.00 3.18
608 627 2.936498 CCTGTTGTGTTCTTCGTGTTCT 59.064 45.455 0.00 0.00 0.00 3.01
609 628 3.374058 CCTGTTGTGTTCTTCGTGTTCTT 59.626 43.478 0.00 0.00 0.00 2.52
610 629 4.494199 CCTGTTGTGTTCTTCGTGTTCTTC 60.494 45.833 0.00 0.00 0.00 2.87
611 630 3.061563 TGTTGTGTTCTTCGTGTTCTTCG 59.938 43.478 0.00 0.00 0.00 3.79
612 631 2.198406 TGTGTTCTTCGTGTTCTTCGG 58.802 47.619 0.00 0.00 0.00 4.30
613 632 1.525619 GTGTTCTTCGTGTTCTTCGGG 59.474 52.381 0.00 0.00 0.00 5.14
614 633 1.137479 TGTTCTTCGTGTTCTTCGGGT 59.863 47.619 0.00 0.00 0.00 5.28
615 634 2.207590 GTTCTTCGTGTTCTTCGGGTT 58.792 47.619 0.00 0.00 0.00 4.11
616 635 2.607631 TCTTCGTGTTCTTCGGGTTT 57.392 45.000 0.00 0.00 0.00 3.27
617 636 2.476821 TCTTCGTGTTCTTCGGGTTTC 58.523 47.619 0.00 0.00 0.00 2.78
618 637 1.529865 CTTCGTGTTCTTCGGGTTTCC 59.470 52.381 0.00 0.00 0.00 3.13
619 638 0.249996 TCGTGTTCTTCGGGTTTCCC 60.250 55.000 0.00 0.00 41.09 3.97
639 658 4.639078 CCCCCTCCAATTTGTGAAAAAT 57.361 40.909 0.00 0.00 0.00 1.82
640 659 4.578871 CCCCCTCCAATTTGTGAAAAATC 58.421 43.478 0.00 0.00 0.00 2.17
641 660 4.244862 CCCCTCCAATTTGTGAAAAATCG 58.755 43.478 0.00 0.00 0.00 3.34
642 661 3.679502 CCCTCCAATTTGTGAAAAATCGC 59.320 43.478 0.00 0.00 0.00 4.58
643 662 4.559153 CCTCCAATTTGTGAAAAATCGCT 58.441 39.130 0.00 0.00 0.00 4.93
644 663 5.336372 CCCTCCAATTTGTGAAAAATCGCTA 60.336 40.000 0.00 0.00 0.00 4.26
645 664 5.801947 CCTCCAATTTGTGAAAAATCGCTAG 59.198 40.000 0.00 0.00 0.00 3.42
646 665 5.160641 TCCAATTTGTGAAAAATCGCTAGC 58.839 37.500 4.06 4.06 0.00 3.42
647 666 5.048083 TCCAATTTGTGAAAAATCGCTAGCT 60.048 36.000 13.93 0.00 0.00 3.32
648 667 6.150307 TCCAATTTGTGAAAAATCGCTAGCTA 59.850 34.615 13.93 1.26 0.00 3.32
649 668 6.470235 CCAATTTGTGAAAAATCGCTAGCTAG 59.530 38.462 16.84 16.84 0.00 3.42
650 669 5.545658 TTTGTGAAAAATCGCTAGCTAGG 57.454 39.130 22.10 12.16 0.00 3.02
651 670 3.531538 TGTGAAAAATCGCTAGCTAGGG 58.468 45.455 27.36 27.36 37.58 3.53
652 671 2.288186 GTGAAAAATCGCTAGCTAGGGC 59.712 50.000 28.18 15.90 36.34 5.19
668 687 3.027419 GGCTTGGCCCTACATCATC 57.973 57.895 0.00 0.00 44.06 2.92
669 688 0.886490 GGCTTGGCCCTACATCATCG 60.886 60.000 0.00 0.00 44.06 3.84
670 689 0.179045 GCTTGGCCCTACATCATCGT 60.179 55.000 0.00 0.00 0.00 3.73
671 690 1.586422 CTTGGCCCTACATCATCGTG 58.414 55.000 0.00 0.00 0.00 4.35
672 691 0.908910 TTGGCCCTACATCATCGTGT 59.091 50.000 0.00 0.00 36.13 4.49
673 692 0.177836 TGGCCCTACATCATCGTGTG 59.822 55.000 0.00 0.00 33.62 3.82
674 693 0.178068 GGCCCTACATCATCGTGTGT 59.822 55.000 0.00 0.00 33.62 3.72
675 694 1.290203 GCCCTACATCATCGTGTGTG 58.710 55.000 0.00 0.00 33.62 3.82
676 695 1.405526 GCCCTACATCATCGTGTGTGT 60.406 52.381 0.00 0.00 33.62 3.72
677 696 2.270923 CCCTACATCATCGTGTGTGTG 58.729 52.381 0.00 0.00 33.62 3.82
678 697 2.270923 CCTACATCATCGTGTGTGTGG 58.729 52.381 0.00 0.00 33.62 4.17
679 698 2.270923 CTACATCATCGTGTGTGTGGG 58.729 52.381 0.00 0.00 33.62 4.61
680 699 0.955428 ACATCATCGTGTGTGTGGGC 60.955 55.000 0.00 0.00 0.00 5.36
681 700 1.741401 ATCATCGTGTGTGTGGGCG 60.741 57.895 0.00 0.00 0.00 6.13
682 701 3.422303 CATCGTGTGTGTGGGCGG 61.422 66.667 0.00 0.00 0.00 6.13
683 702 3.936203 ATCGTGTGTGTGGGCGGT 61.936 61.111 0.00 0.00 0.00 5.68
684 703 3.876589 ATCGTGTGTGTGGGCGGTC 62.877 63.158 0.00 0.00 0.00 4.79
704 723 2.590007 GCCGTATGCCTGAGCCAG 60.590 66.667 0.00 0.00 38.69 4.85
719 738 4.988598 CAGGACGTGCGGGCTGTT 62.989 66.667 0.00 0.00 0.00 3.16
720 739 4.250305 AGGACGTGCGGGCTGTTT 62.250 61.111 0.00 0.00 0.00 2.83
721 740 4.025401 GGACGTGCGGGCTGTTTG 62.025 66.667 0.00 0.00 0.00 2.93
722 741 4.025401 GACGTGCGGGCTGTTTGG 62.025 66.667 0.00 0.00 0.00 3.28
730 749 3.752704 GGCTGTTTGGCCGTACAA 58.247 55.556 10.54 0.00 42.82 2.41
731 750 1.284715 GGCTGTTTGGCCGTACAAC 59.715 57.895 10.54 6.56 42.82 3.32
732 751 1.170290 GGCTGTTTGGCCGTACAACT 61.170 55.000 10.54 0.00 42.82 3.16
733 752 0.040425 GCTGTTTGGCCGTACAACTG 60.040 55.000 10.54 9.43 0.00 3.16
734 753 1.588674 CTGTTTGGCCGTACAACTGA 58.411 50.000 10.54 0.00 0.00 3.41
735 754 1.263217 CTGTTTGGCCGTACAACTGAC 59.737 52.381 10.54 0.00 0.00 3.51
736 755 1.301423 GTTTGGCCGTACAACTGACA 58.699 50.000 0.00 0.00 0.00 3.58
737 756 1.671845 GTTTGGCCGTACAACTGACAA 59.328 47.619 0.00 0.00 28.12 3.18
738 757 1.301423 TTGGCCGTACAACTGACAAC 58.699 50.000 0.00 0.00 24.86 3.32
739 758 0.466543 TGGCCGTACAACTGACAACT 59.533 50.000 0.00 0.00 0.00 3.16
740 759 1.145803 GGCCGTACAACTGACAACTC 58.854 55.000 0.00 0.00 0.00 3.01
741 760 0.782384 GCCGTACAACTGACAACTCG 59.218 55.000 0.00 0.00 0.00 4.18
742 761 1.866880 GCCGTACAACTGACAACTCGT 60.867 52.381 0.00 0.00 0.00 4.18
743 762 2.466846 CCGTACAACTGACAACTCGTT 58.533 47.619 0.00 0.00 0.00 3.85
744 763 2.470257 CCGTACAACTGACAACTCGTTC 59.530 50.000 0.00 0.00 0.00 3.95
745 764 2.150611 CGTACAACTGACAACTCGTTCG 59.849 50.000 0.00 0.00 0.00 3.95
746 765 2.572191 ACAACTGACAACTCGTTCGA 57.428 45.000 0.00 0.00 0.00 3.71
747 766 2.190981 ACAACTGACAACTCGTTCGAC 58.809 47.619 0.00 0.00 0.00 4.20
748 767 2.190161 CAACTGACAACTCGTTCGACA 58.810 47.619 0.00 0.00 0.00 4.35
749 768 1.836383 ACTGACAACTCGTTCGACAC 58.164 50.000 0.00 0.00 0.00 3.67
758 777 3.635433 CGTTCGACACGGTCCATAT 57.365 52.632 10.88 0.00 45.89 1.78
759 778 2.761392 CGTTCGACACGGTCCATATA 57.239 50.000 10.88 0.00 45.89 0.86
760 779 2.378806 CGTTCGACACGGTCCATATAC 58.621 52.381 10.88 0.00 45.89 1.47
761 780 2.223317 CGTTCGACACGGTCCATATACA 60.223 50.000 10.88 0.00 45.89 2.29
762 781 3.549423 CGTTCGACACGGTCCATATACAT 60.549 47.826 10.88 0.00 45.89 2.29
763 782 3.909776 TCGACACGGTCCATATACATC 57.090 47.619 0.00 0.00 0.00 3.06
764 783 2.224784 TCGACACGGTCCATATACATCG 59.775 50.000 0.00 0.00 0.00 3.84
765 784 2.325761 GACACGGTCCATATACATCGC 58.674 52.381 0.00 0.00 0.00 4.58
766 785 1.684450 ACACGGTCCATATACATCGCA 59.316 47.619 0.00 0.00 0.00 5.10
767 786 2.058798 CACGGTCCATATACATCGCAC 58.941 52.381 0.00 0.00 0.00 5.34
768 787 1.335597 ACGGTCCATATACATCGCACG 60.336 52.381 0.00 0.00 0.00 5.34
769 788 1.335597 CGGTCCATATACATCGCACGT 60.336 52.381 0.00 0.00 0.00 4.49
770 789 2.750948 GGTCCATATACATCGCACGTT 58.249 47.619 0.00 0.00 0.00 3.99
771 790 2.729882 GGTCCATATACATCGCACGTTC 59.270 50.000 0.00 0.00 0.00 3.95
772 791 2.404029 GTCCATATACATCGCACGTTCG 59.596 50.000 0.00 0.00 0.00 3.95
773 792 1.719246 CCATATACATCGCACGTTCGG 59.281 52.381 7.93 0.00 0.00 4.30
774 793 2.390938 CATATACATCGCACGTTCGGT 58.609 47.619 7.93 0.00 0.00 4.69
791 810 1.946768 CGGTGAATTACGGCATCCAAT 59.053 47.619 0.00 0.00 0.00 3.16
828 847 9.503427 CAAATTCTCGTCTTTTAGTTTTTGAGT 57.497 29.630 0.00 0.00 0.00 3.41
863 882 9.263538 GTGGGTTTCTTTTTAATTAACCGAATT 57.736 29.630 0.00 0.00 39.27 2.17
864 883 9.478768 TGGGTTTCTTTTTAATTAACCGAATTC 57.521 29.630 0.00 0.00 39.27 2.17
865 884 8.641155 GGGTTTCTTTTTAATTAACCGAATTCG 58.359 33.333 20.92 20.92 39.27 3.34
866 885 9.396938 GGTTTCTTTTTAATTAACCGAATTCGA 57.603 29.630 28.76 9.48 43.02 3.71
870 889 9.763465 TCTTTTTAATTAACCGAATTCGATGAC 57.237 29.630 28.76 0.00 43.02 3.06
871 890 8.898983 TTTTTAATTAACCGAATTCGATGACC 57.101 30.769 28.76 0.00 43.02 4.02
872 891 4.789095 AATTAACCGAATTCGATGACCG 57.211 40.909 28.76 13.16 43.02 4.79
873 892 3.507103 TTAACCGAATTCGATGACCGA 57.493 42.857 28.76 5.40 46.94 4.69
927 948 1.374252 CCCAGTCCGTTTCTCGTGG 60.374 63.158 0.00 0.00 37.94 4.94
1006 1057 1.449353 CCACCTAGCAGGATGGAGC 59.551 63.158 8.91 0.00 38.20 4.70
1149 1200 2.840038 TCTCTACATGCACCACCAGATT 59.160 45.455 0.00 0.00 0.00 2.40
1160 1211 1.553248 CCACCAGATTCCCTCGTAACA 59.447 52.381 0.00 0.00 0.00 2.41
1166 1217 3.193691 CAGATTCCCTCGTAACACTCAGT 59.806 47.826 0.00 0.00 0.00 3.41
1195 1247 3.093172 CCCTCCCTCCTCCCTTGC 61.093 72.222 0.00 0.00 0.00 4.01
1232 1284 7.170965 AGGAATCAGCTTCAATAGTTCTTTCA 58.829 34.615 0.00 0.00 35.41 2.69
1321 1373 5.163395 TGGTTTGGTTTGGTCCAATTCTTAC 60.163 40.000 4.80 0.00 45.30 2.34
1380 1434 3.195661 CCTAGTTTGGGTACGATTGAGC 58.804 50.000 0.00 0.00 0.00 4.26
1394 1448 5.120399 ACGATTGAGCGGATTTGGTAAATA 58.880 37.500 0.00 0.00 35.12 1.40
1619 1685 1.202348 CTTTTTGCGGGGTCATTCTCC 59.798 52.381 0.00 0.00 0.00 3.71
1683 1749 7.205297 ACGATTGTTGTACCTACCATGTATAC 58.795 38.462 0.00 0.00 0.00 1.47
1822 1888 2.730672 CGGCGCGAGAGGTTTCAAG 61.731 63.158 12.10 0.00 0.00 3.02
1931 1997 4.037208 AGTTCAGTGAGGAAGTTTTGCATG 59.963 41.667 0.00 0.00 0.00 4.06
1949 2015 2.419198 GATGCCGGATCGAGCAGT 59.581 61.111 5.05 3.28 43.38 4.40
2080 2146 2.550277 TATCTTCAGAGTCAGGCCCA 57.450 50.000 0.00 0.00 0.00 5.36
2142 2208 4.163649 ACAGAGGTATTTTACTAGCCACCC 59.836 45.833 0.00 0.00 0.00 4.61
2249 2315 1.004044 CACCAATGCCTCTTCTCCTGT 59.996 52.381 0.00 0.00 0.00 4.00
2259 2325 0.179089 CTTCTCCTGTCGGCCATGAG 60.179 60.000 2.24 0.28 37.22 2.90
2375 2441 4.227134 ATAGCGCACCTGCTCCCG 62.227 66.667 11.47 0.00 45.87 5.14
2403 2469 3.144193 CCGCCTCGCCTCTCTTCT 61.144 66.667 0.00 0.00 0.00 2.85
2574 2640 4.383880 GGAGGTATACTGGGAAAAGTGACC 60.384 50.000 2.25 0.00 37.59 4.02
2651 2717 6.149807 GGGTGTAAATTTTACCGAGACAATCA 59.850 38.462 14.99 0.00 35.31 2.57
2653 2719 7.308109 GGTGTAAATTTTACCGAGACAATCACA 60.308 37.037 14.99 0.00 0.00 3.58
2709 2775 3.065095 GTGTTTTACCGGTGTACTTTGCA 59.935 43.478 19.93 2.42 0.00 4.08
2792 2858 1.612726 CCTCCAGGACAAGCTTCTTGG 60.613 57.143 9.73 9.73 42.79 3.61
2814 2880 2.158385 AGTGGTGGCCAGGAACAAATAA 60.158 45.455 5.11 0.00 32.34 1.40
2863 2929 3.077519 GCGACGTATGGCCACCTCT 62.078 63.158 8.16 0.00 0.00 3.69
2990 3056 1.668419 GGATGGTGGTCCGAATTGAG 58.332 55.000 0.00 0.00 36.30 3.02
3009 3075 7.634671 ATTGAGTATTGATCAATTCAGTGCA 57.365 32.000 25.26 13.77 43.20 4.57
3097 3163 1.078143 AAGAAGGCGATGCTCACCC 60.078 57.895 0.00 0.00 0.00 4.61
3385 3452 1.649321 TTGGAGATGCAGTCCAGACT 58.351 50.000 17.66 0.00 45.00 3.24
3504 3571 1.207089 CCTTGATGTAACTCGGGCTCA 59.793 52.381 0.00 0.00 0.00 4.26
3548 3615 2.436824 GCGTCTTGCCTTCCCTCC 60.437 66.667 0.00 0.00 37.76 4.30
3595 3662 2.011617 GCTTGGGGTCTATGGGCCAT 62.012 60.000 24.69 24.69 0.00 4.40
3936 4004 5.395214 GGTTCTTGTTTCAAGGGTGAATTGT 60.395 40.000 9.18 0.00 43.29 2.71
4078 4146 5.193679 GGAGGGAGTACTAAATTGTGCATT 58.806 41.667 0.00 0.00 0.00 3.56
4755 4823 6.126863 TGGTAGATTTGATTCTGGAAGTGT 57.873 37.500 0.00 0.00 33.76 3.55
5618 5690 3.327757 TGTTTCTGCTGGTTAGATGTCCT 59.672 43.478 0.00 0.00 0.00 3.85
5645 5717 5.402630 ACATTGAACTTACCCCTGGATTTT 58.597 37.500 0.00 0.00 0.00 1.82
5717 5789 7.435068 TGATGGCTAACTTACTCTGTTTTTC 57.565 36.000 0.00 0.00 0.00 2.29
6420 6537 3.988976 ATGCTGTAGTGAGGTGAACAT 57.011 42.857 0.00 0.00 0.00 2.71
6459 6576 6.097412 AGCATTCTTCAATCCTAAATTGGTCC 59.903 38.462 0.00 0.00 0.00 4.46
6516 6633 7.170965 TCAGCATTCTTCAATCTTATATCCCC 58.829 38.462 0.00 0.00 0.00 4.81
6517 6634 6.093219 CAGCATTCTTCAATCTTATATCCCCG 59.907 42.308 0.00 0.00 0.00 5.73
6518 6635 5.163713 GCATTCTTCAATCTTATATCCCCGC 60.164 44.000 0.00 0.00 0.00 6.13
6568 6685 2.564062 CTGGAATGGTTTGGTGCTCAAT 59.436 45.455 0.00 0.00 34.98 2.57
6569 6686 3.763360 CTGGAATGGTTTGGTGCTCAATA 59.237 43.478 0.00 0.00 34.98 1.90
6679 7129 6.374588 TCTGTTTTCCCCCATTTTTAGTGTA 58.625 36.000 0.00 0.00 0.00 2.90
6680 7130 6.492087 TCTGTTTTCCCCCATTTTTAGTGTAG 59.508 38.462 0.00 0.00 0.00 2.74
6806 7551 2.105006 ATGTGTCTGGATGAGTGTGC 57.895 50.000 0.00 0.00 0.00 4.57
6915 7660 6.366604 TGCTTGAATATTGAGTGCAAATTGTG 59.633 34.615 0.00 0.00 37.59 3.33
7067 7813 8.522178 AAATACTTACTGTTGAAAGAGAGACG 57.478 34.615 0.00 0.00 0.00 4.18
7068 7814 5.769484 ACTTACTGTTGAAAGAGAGACGA 57.231 39.130 0.00 0.00 0.00 4.20
7069 7815 5.764131 ACTTACTGTTGAAAGAGAGACGAG 58.236 41.667 0.00 0.00 0.00 4.18
7070 7816 3.019933 ACTGTTGAAAGAGAGACGAGC 57.980 47.619 0.00 0.00 0.00 5.03
7071 7817 1.982223 CTGTTGAAAGAGAGACGAGCG 59.018 52.381 0.00 0.00 0.00 5.03
7072 7818 1.607148 TGTTGAAAGAGAGACGAGCGA 59.393 47.619 0.00 0.00 0.00 4.93
7073 7819 2.246789 GTTGAAAGAGAGACGAGCGAG 58.753 52.381 0.00 0.00 0.00 5.03
7074 7820 1.809684 TGAAAGAGAGACGAGCGAGA 58.190 50.000 0.00 0.00 0.00 4.04
7075 7821 1.735018 TGAAAGAGAGACGAGCGAGAG 59.265 52.381 0.00 0.00 0.00 3.20
7076 7822 2.004017 GAAAGAGAGACGAGCGAGAGA 58.996 52.381 0.00 0.00 0.00 3.10
7077 7823 1.651987 AAGAGAGACGAGCGAGAGAG 58.348 55.000 0.00 0.00 0.00 3.20
7078 7824 0.821517 AGAGAGACGAGCGAGAGAGA 59.178 55.000 0.00 0.00 0.00 3.10
7079 7825 0.928229 GAGAGACGAGCGAGAGAGAC 59.072 60.000 0.00 0.00 0.00 3.36
7080 7826 0.248012 AGAGACGAGCGAGAGAGACA 59.752 55.000 0.00 0.00 0.00 3.41
7081 7827 1.080298 GAGACGAGCGAGAGAGACAA 58.920 55.000 0.00 0.00 0.00 3.18
7082 7828 0.800012 AGACGAGCGAGAGAGACAAC 59.200 55.000 0.00 0.00 0.00 3.32
7083 7829 0.517755 GACGAGCGAGAGAGACAACA 59.482 55.000 0.00 0.00 0.00 3.33
7084 7830 0.952280 ACGAGCGAGAGAGACAACAA 59.048 50.000 0.00 0.00 0.00 2.83
7085 7831 1.337071 ACGAGCGAGAGAGACAACAAA 59.663 47.619 0.00 0.00 0.00 2.83
7086 7832 2.029828 ACGAGCGAGAGAGACAACAAAT 60.030 45.455 0.00 0.00 0.00 2.32
7087 7833 2.343843 CGAGCGAGAGAGACAACAAATG 59.656 50.000 0.00 0.00 0.00 2.32
7088 7834 3.579709 GAGCGAGAGAGACAACAAATGA 58.420 45.455 0.00 0.00 0.00 2.57
7089 7835 4.180057 GAGCGAGAGAGACAACAAATGAT 58.820 43.478 0.00 0.00 0.00 2.45
7090 7836 4.573900 AGCGAGAGAGACAACAAATGATT 58.426 39.130 0.00 0.00 0.00 2.57
7091 7837 4.629200 AGCGAGAGAGACAACAAATGATTC 59.371 41.667 0.00 0.00 0.00 2.52
7092 7838 4.389992 GCGAGAGAGACAACAAATGATTCA 59.610 41.667 0.00 0.00 0.00 2.57
7093 7839 5.106948 GCGAGAGAGACAACAAATGATTCAA 60.107 40.000 0.00 0.00 0.00 2.69
7094 7840 6.302615 CGAGAGAGACAACAAATGATTCAAC 58.697 40.000 0.00 0.00 0.00 3.18
7095 7841 6.146837 CGAGAGAGACAACAAATGATTCAACT 59.853 38.462 0.00 0.00 0.00 3.16
7096 7842 7.199541 AGAGAGACAACAAATGATTCAACTG 57.800 36.000 0.00 0.00 0.00 3.16
7097 7843 6.769822 AGAGAGACAACAAATGATTCAACTGT 59.230 34.615 0.00 0.00 0.00 3.55
7098 7844 6.732154 AGAGACAACAAATGATTCAACTGTG 58.268 36.000 5.13 3.55 0.00 3.66
7099 7845 6.319658 AGAGACAACAAATGATTCAACTGTGT 59.680 34.615 5.13 5.88 0.00 3.72
7100 7846 7.498900 AGAGACAACAAATGATTCAACTGTGTA 59.501 33.333 5.13 0.00 0.00 2.90
7101 7847 8.169977 AGACAACAAATGATTCAACTGTGTAT 57.830 30.769 5.13 2.21 0.00 2.29
7102 7848 8.632679 AGACAACAAATGATTCAACTGTGTATT 58.367 29.630 5.13 0.00 0.00 1.89
7103 7849 8.801715 ACAACAAATGATTCAACTGTGTATTC 57.198 30.769 5.13 0.00 0.00 1.75
7104 7850 8.632679 ACAACAAATGATTCAACTGTGTATTCT 58.367 29.630 5.13 0.00 0.00 2.40
7105 7851 9.467258 CAACAAATGATTCAACTGTGTATTCTT 57.533 29.630 5.13 0.00 0.00 2.52
7138 7884 8.773645 TGATTGAAGCTTATATACAATGGAACG 58.226 33.333 13.34 0.00 32.50 3.95
7139 7885 7.490962 TTGAAGCTTATATACAATGGAACGG 57.509 36.000 0.00 0.00 0.00 4.44
7140 7886 6.588204 TGAAGCTTATATACAATGGAACGGT 58.412 36.000 0.00 0.00 0.00 4.83
7141 7887 7.051623 TGAAGCTTATATACAATGGAACGGTT 58.948 34.615 0.00 0.00 0.00 4.44
7142 7888 6.861065 AGCTTATATACAATGGAACGGTTG 57.139 37.500 0.00 0.00 33.69 3.77
7143 7889 5.238650 AGCTTATATACAATGGAACGGTTGC 59.761 40.000 5.34 5.34 31.21 4.17
7144 7890 5.562113 GCTTATATACAATGGAACGGTTGCC 60.562 44.000 9.96 6.22 31.21 4.52
7145 7891 2.507407 ATACAATGGAACGGTTGCCT 57.493 45.000 9.96 0.00 31.21 4.75
7146 7892 1.816074 TACAATGGAACGGTTGCCTC 58.184 50.000 9.96 0.00 31.21 4.70
7147 7893 0.893727 ACAATGGAACGGTTGCCTCC 60.894 55.000 9.96 0.00 31.21 4.30
7164 7910 4.493747 CGAGGGAGGCGACGGTTC 62.494 72.222 0.00 0.00 0.00 3.62
7182 7928 4.244326 GCTGGAGGCGTCTCTCTA 57.756 61.111 17.97 3.05 39.86 2.43
7183 7929 2.029743 GCTGGAGGCGTCTCTCTAG 58.970 63.158 17.97 13.59 42.81 2.43
7184 7930 1.452145 GCTGGAGGCGTCTCTCTAGG 61.452 65.000 17.97 4.18 41.05 3.02
7185 7931 1.452145 CTGGAGGCGTCTCTCTAGGC 61.452 65.000 17.97 0.00 38.30 3.93
7186 7932 1.152839 GGAGGCGTCTCTCTAGGCT 60.153 63.158 17.97 0.00 43.66 4.58
7187 7933 1.452145 GGAGGCGTCTCTCTAGGCTG 61.452 65.000 17.97 0.00 40.97 4.85
7188 7934 0.750182 GAGGCGTCTCTCTAGGCTGT 60.750 60.000 10.47 0.00 40.97 4.40
7189 7935 0.547075 AGGCGTCTCTCTAGGCTGTA 59.453 55.000 0.00 0.00 39.38 2.74
7190 7936 1.064611 AGGCGTCTCTCTAGGCTGTAA 60.065 52.381 0.00 0.00 39.38 2.41
7191 7937 1.065851 GGCGTCTCTCTAGGCTGTAAC 59.934 57.143 0.00 0.00 0.00 2.50
7192 7938 1.065851 GCGTCTCTCTAGGCTGTAACC 59.934 57.143 0.00 0.00 0.00 2.85
7193 7939 1.331138 CGTCTCTCTAGGCTGTAACCG 59.669 57.143 0.00 0.00 33.69 4.44
7194 7940 2.641305 GTCTCTCTAGGCTGTAACCGA 58.359 52.381 0.00 0.00 33.69 4.69
7195 7941 2.355444 GTCTCTCTAGGCTGTAACCGAC 59.645 54.545 0.00 0.00 33.69 4.79
7196 7942 2.026542 TCTCTCTAGGCTGTAACCGACA 60.027 50.000 0.00 0.00 36.35 4.35
7197 7943 2.089980 TCTCTAGGCTGTAACCGACAC 58.910 52.381 0.00 0.00 33.31 3.67
7198 7944 0.806868 TCTAGGCTGTAACCGACACG 59.193 55.000 0.00 0.00 33.31 4.49
7199 7945 0.806868 CTAGGCTGTAACCGACACGA 59.193 55.000 0.00 0.00 33.31 4.35
7200 7946 0.523072 TAGGCTGTAACCGACACGAC 59.477 55.000 0.00 0.00 33.31 4.34
7201 7947 2.084681 GGCTGTAACCGACACGACG 61.085 63.158 0.00 0.00 33.31 5.12
7208 7954 2.256158 CCGACACGACGGTTGCTA 59.744 61.111 0.00 0.00 46.70 3.49
7209 7955 1.800315 CCGACACGACGGTTGCTAG 60.800 63.158 0.00 0.00 46.70 3.42
7210 7956 1.081641 CGACACGACGGTTGCTAGT 60.082 57.895 0.00 0.00 0.00 2.57
7211 7957 0.166597 CGACACGACGGTTGCTAGTA 59.833 55.000 0.00 0.00 0.00 1.82
7212 7958 1.400113 CGACACGACGGTTGCTAGTAA 60.400 52.381 0.00 0.00 0.00 2.24
7213 7959 2.730090 CGACACGACGGTTGCTAGTAAT 60.730 50.000 0.00 0.00 0.00 1.89
7214 7960 2.597305 GACACGACGGTTGCTAGTAATG 59.403 50.000 0.00 0.00 0.00 1.90
7215 7961 2.029649 ACACGACGGTTGCTAGTAATGT 60.030 45.455 0.00 0.00 0.00 2.71
7216 7962 2.344441 CACGACGGTTGCTAGTAATGTG 59.656 50.000 0.00 3.41 0.00 3.21
7217 7963 1.924524 CGACGGTTGCTAGTAATGTGG 59.075 52.381 6.22 2.45 0.00 4.17
7218 7964 2.416296 CGACGGTTGCTAGTAATGTGGA 60.416 50.000 6.22 0.00 0.00 4.02
7219 7965 3.592059 GACGGTTGCTAGTAATGTGGAA 58.408 45.455 6.22 0.00 0.00 3.53
7220 7966 3.332034 ACGGTTGCTAGTAATGTGGAAC 58.668 45.455 0.00 0.00 37.35 3.62
7221 7967 2.676342 CGGTTGCTAGTAATGTGGAACC 59.324 50.000 9.95 9.95 44.89 3.62
7222 7968 2.676342 GGTTGCTAGTAATGTGGAACCG 59.324 50.000 0.00 0.00 41.04 4.44
7223 7969 2.018542 TGCTAGTAATGTGGAACCGC 57.981 50.000 0.00 0.00 34.36 5.68
7224 7970 1.276705 TGCTAGTAATGTGGAACCGCA 59.723 47.619 9.53 9.53 40.92 5.69
7225 7971 1.664151 GCTAGTAATGTGGAACCGCAC 59.336 52.381 9.31 0.00 39.39 5.34
7226 7972 1.924524 CTAGTAATGTGGAACCGCACG 59.075 52.381 9.31 0.00 39.39 5.34
7227 7973 0.319083 AGTAATGTGGAACCGCACGA 59.681 50.000 9.31 0.00 39.39 4.35
7228 7974 0.719465 GTAATGTGGAACCGCACGAG 59.281 55.000 9.31 0.00 39.39 4.18
7229 7975 0.319083 TAATGTGGAACCGCACGAGT 59.681 50.000 9.31 0.00 39.39 4.18
7230 7976 1.227999 AATGTGGAACCGCACGAGTG 61.228 55.000 9.31 0.00 39.39 3.51
7231 7977 2.028484 GTGGAACCGCACGAGTGA 59.972 61.111 7.50 0.00 0.00 3.41
7232 7978 2.022129 GTGGAACCGCACGAGTGAG 61.022 63.158 7.50 3.54 0.00 3.51
7233 7979 2.197605 TGGAACCGCACGAGTGAGA 61.198 57.895 7.50 0.00 31.84 3.27
7234 7980 1.006571 GGAACCGCACGAGTGAGAA 60.007 57.895 7.50 0.00 31.84 2.87
7235 7981 0.599204 GGAACCGCACGAGTGAGAAA 60.599 55.000 7.50 0.00 31.84 2.52
7236 7982 0.784778 GAACCGCACGAGTGAGAAAG 59.215 55.000 7.50 0.00 31.84 2.62
7237 7983 0.387929 AACCGCACGAGTGAGAAAGA 59.612 50.000 7.50 0.00 31.84 2.52
7238 7984 0.039074 ACCGCACGAGTGAGAAAGAG 60.039 55.000 7.50 0.00 31.84 2.85
7239 7985 1.347817 CCGCACGAGTGAGAAAGAGC 61.348 60.000 7.50 0.00 31.84 4.09
7240 7986 1.669158 CGCACGAGTGAGAAAGAGCG 61.669 60.000 7.50 0.00 37.91 5.03
7241 7987 1.347817 GCACGAGTGAGAAAGAGCGG 61.348 60.000 7.50 0.00 0.00 5.52
7242 7988 0.734253 CACGAGTGAGAAAGAGCGGG 60.734 60.000 0.00 0.00 0.00 6.13
7243 7989 1.153745 CGAGTGAGAAAGAGCGGGG 60.154 63.158 0.00 0.00 0.00 5.73
7244 7990 1.595993 CGAGTGAGAAAGAGCGGGGA 61.596 60.000 0.00 0.00 0.00 4.81
7245 7991 0.827368 GAGTGAGAAAGAGCGGGGAT 59.173 55.000 0.00 0.00 0.00 3.85
7246 7992 1.208293 GAGTGAGAAAGAGCGGGGATT 59.792 52.381 0.00 0.00 0.00 3.01
7247 7993 2.431057 GAGTGAGAAAGAGCGGGGATTA 59.569 50.000 0.00 0.00 0.00 1.75
7248 7994 3.041946 AGTGAGAAAGAGCGGGGATTAT 58.958 45.455 0.00 0.00 0.00 1.28
7249 7995 3.070302 AGTGAGAAAGAGCGGGGATTATC 59.930 47.826 0.00 0.00 0.00 1.75
7250 7996 2.368875 TGAGAAAGAGCGGGGATTATCC 59.631 50.000 1.91 1.91 35.23 2.59
7265 8011 4.881850 GGATTATCCCCTAATAACGCATGG 59.118 45.833 0.00 0.00 29.93 3.66
7266 8012 2.879103 ATCCCCTAATAACGCATGGG 57.121 50.000 8.44 8.44 37.68 4.00
7267 8013 1.513858 TCCCCTAATAACGCATGGGT 58.486 50.000 10.03 10.03 36.26 4.51
7268 8014 1.847737 TCCCCTAATAACGCATGGGTT 59.152 47.619 28.31 28.31 36.26 4.11
7269 8015 3.047115 TCCCCTAATAACGCATGGGTTA 58.953 45.455 30.34 30.34 36.85 2.85
7270 8016 3.653836 TCCCCTAATAACGCATGGGTTAT 59.346 43.478 31.61 31.61 43.15 1.89
7272 8018 5.310068 TCCCCTAATAACGCATGGGTTATTA 59.690 40.000 38.56 38.56 46.09 0.98
7273 8019 6.012333 TCCCCTAATAACGCATGGGTTATTAT 60.012 38.462 39.88 30.07 46.29 1.28
7274 8020 6.661805 CCCCTAATAACGCATGGGTTATTATT 59.338 38.462 39.88 30.64 46.29 1.40
7275 8021 7.148137 CCCCTAATAACGCATGGGTTATTATTC 60.148 40.741 39.88 8.54 46.29 1.75
7276 8022 7.610305 CCCTAATAACGCATGGGTTATTATTCT 59.390 37.037 39.88 29.10 46.29 2.40
7277 8023 8.665685 CCTAATAACGCATGGGTTATTATTCTC 58.334 37.037 39.88 7.94 46.29 2.87
7278 8024 9.214957 CTAATAACGCATGGGTTATTATTCTCA 57.785 33.333 39.88 29.37 46.29 3.27
7279 8025 8.458573 AATAACGCATGGGTTATTATTCTCAA 57.541 30.769 38.82 19.55 46.09 3.02
7280 8026 5.751243 ACGCATGGGTTATTATTCTCAAC 57.249 39.130 10.03 0.00 0.00 3.18
7281 8027 5.189928 ACGCATGGGTTATTATTCTCAACA 58.810 37.500 10.03 0.00 0.00 3.33
7282 8028 5.065988 ACGCATGGGTTATTATTCTCAACAC 59.934 40.000 10.03 0.00 0.00 3.32
7283 8029 5.296780 CGCATGGGTTATTATTCTCAACACT 59.703 40.000 0.68 0.00 0.00 3.55
7284 8030 6.511767 CGCATGGGTTATTATTCTCAACACTC 60.512 42.308 0.68 0.00 0.00 3.51
7285 8031 6.238759 GCATGGGTTATTATTCTCAACACTCC 60.239 42.308 0.00 0.00 0.00 3.85
7286 8032 6.636454 TGGGTTATTATTCTCAACACTCCT 57.364 37.500 0.00 0.00 0.00 3.69
7287 8033 6.650120 TGGGTTATTATTCTCAACACTCCTC 58.350 40.000 0.00 0.00 0.00 3.71
7288 8034 6.056236 GGGTTATTATTCTCAACACTCCTCC 58.944 44.000 0.00 0.00 0.00 4.30
7289 8035 6.126739 GGGTTATTATTCTCAACACTCCTCCT 60.127 42.308 0.00 0.00 0.00 3.69
7290 8036 7.070821 GGGTTATTATTCTCAACACTCCTCCTA 59.929 40.741 0.00 0.00 0.00 2.94
7291 8037 8.483758 GGTTATTATTCTCAACACTCCTCCTAA 58.516 37.037 0.00 0.00 0.00 2.69
7294 8040 7.733773 TTATTCTCAACACTCCTCCTAATCA 57.266 36.000 0.00 0.00 0.00 2.57
7295 8041 5.407407 TTCTCAACACTCCTCCTAATCAC 57.593 43.478 0.00 0.00 0.00 3.06
7296 8042 4.678256 TCTCAACACTCCTCCTAATCACT 58.322 43.478 0.00 0.00 0.00 3.41
7297 8043 4.464244 TCTCAACACTCCTCCTAATCACTG 59.536 45.833 0.00 0.00 0.00 3.66
7298 8044 3.055819 TCAACACTCCTCCTAATCACTGC 60.056 47.826 0.00 0.00 0.00 4.40
7299 8045 2.826488 ACACTCCTCCTAATCACTGCT 58.174 47.619 0.00 0.00 0.00 4.24
7300 8046 3.177228 ACACTCCTCCTAATCACTGCTT 58.823 45.455 0.00 0.00 0.00 3.91
7301 8047 3.055530 ACACTCCTCCTAATCACTGCTTG 60.056 47.826 0.00 0.00 0.00 4.01
7302 8048 3.196469 CACTCCTCCTAATCACTGCTTGA 59.804 47.826 0.00 0.00 39.11 3.02
7303 8049 3.196685 ACTCCTCCTAATCACTGCTTGAC 59.803 47.826 0.00 0.00 36.92 3.18
7304 8050 3.445008 TCCTCCTAATCACTGCTTGACT 58.555 45.455 0.00 0.00 36.92 3.41
7305 8051 3.196469 TCCTCCTAATCACTGCTTGACTG 59.804 47.826 0.00 0.00 36.92 3.51
7306 8052 2.935201 CTCCTAATCACTGCTTGACTGC 59.065 50.000 0.00 0.00 36.92 4.40
7307 8053 2.302733 TCCTAATCACTGCTTGACTGCA 59.697 45.455 0.00 0.00 36.92 4.41
7308 8054 3.054875 TCCTAATCACTGCTTGACTGCAT 60.055 43.478 0.00 0.00 42.48 3.96
7309 8055 4.162131 TCCTAATCACTGCTTGACTGCATA 59.838 41.667 0.00 0.00 42.48 3.14
7310 8056 4.877823 CCTAATCACTGCTTGACTGCATAA 59.122 41.667 0.00 0.00 42.48 1.90
7311 8057 4.959596 AATCACTGCTTGACTGCATAAG 57.040 40.909 0.00 0.00 42.48 1.73
7312 8058 2.703416 TCACTGCTTGACTGCATAAGG 58.297 47.619 0.00 0.00 42.48 2.69
7313 8059 1.741706 CACTGCTTGACTGCATAAGGG 59.258 52.381 0.00 0.00 42.48 3.95
7314 8060 1.352352 ACTGCTTGACTGCATAAGGGT 59.648 47.619 0.00 0.00 42.48 4.34
7315 8061 2.012673 CTGCTTGACTGCATAAGGGTC 58.987 52.381 0.00 0.00 42.48 4.46
7316 8062 1.340017 TGCTTGACTGCATAAGGGTCC 60.340 52.381 1.06 0.00 38.12 4.46
7317 8063 1.340017 GCTTGACTGCATAAGGGTCCA 60.340 52.381 1.06 0.00 0.00 4.02
7318 8064 2.684927 GCTTGACTGCATAAGGGTCCAT 60.685 50.000 1.06 0.00 0.00 3.41
7319 8065 3.209410 CTTGACTGCATAAGGGTCCATC 58.791 50.000 1.06 0.00 0.00 3.51
7320 8066 2.195727 TGACTGCATAAGGGTCCATCA 58.804 47.619 1.06 0.00 0.00 3.07
7321 8067 2.779430 TGACTGCATAAGGGTCCATCAT 59.221 45.455 1.06 0.00 0.00 2.45
7322 8068 3.181451 TGACTGCATAAGGGTCCATCATC 60.181 47.826 1.06 0.00 0.00 2.92
7323 8069 2.779430 ACTGCATAAGGGTCCATCATCA 59.221 45.455 0.00 0.00 0.00 3.07
7324 8070 3.396946 ACTGCATAAGGGTCCATCATCAT 59.603 43.478 0.00 0.00 0.00 2.45
7325 8071 4.008330 CTGCATAAGGGTCCATCATCATC 58.992 47.826 0.00 0.00 0.00 2.92
7326 8072 3.245016 TGCATAAGGGTCCATCATCATCC 60.245 47.826 0.00 0.00 0.00 3.51
7327 8073 3.603532 CATAAGGGTCCATCATCATCCG 58.396 50.000 0.00 0.00 0.00 4.18
7328 8074 1.511613 AAGGGTCCATCATCATCCGT 58.488 50.000 0.00 0.00 0.00 4.69
7329 8075 1.511613 AGGGTCCATCATCATCCGTT 58.488 50.000 0.00 0.00 0.00 4.44
7330 8076 2.689658 AGGGTCCATCATCATCCGTTA 58.310 47.619 0.00 0.00 0.00 3.18
7331 8077 3.045634 AGGGTCCATCATCATCCGTTAA 58.954 45.455 0.00 0.00 0.00 2.01
7332 8078 3.071602 AGGGTCCATCATCATCCGTTAAG 59.928 47.826 0.00 0.00 0.00 1.85
7333 8079 3.181454 GGGTCCATCATCATCCGTTAAGT 60.181 47.826 0.00 0.00 0.00 2.24
7334 8080 4.058817 GGTCCATCATCATCCGTTAAGTC 58.941 47.826 0.00 0.00 0.00 3.01
7335 8081 4.202264 GGTCCATCATCATCCGTTAAGTCT 60.202 45.833 0.00 0.00 0.00 3.24
7336 8082 4.985409 GTCCATCATCATCCGTTAAGTCTC 59.015 45.833 0.00 0.00 0.00 3.36
7337 8083 4.039245 TCCATCATCATCCGTTAAGTCTCC 59.961 45.833 0.00 0.00 0.00 3.71
7338 8084 4.039730 CCATCATCATCCGTTAAGTCTCCT 59.960 45.833 0.00 0.00 0.00 3.69
7339 8085 5.453903 CCATCATCATCCGTTAAGTCTCCTT 60.454 44.000 0.00 0.00 34.56 3.36
7340 8086 5.263968 TCATCATCCGTTAAGTCTCCTTC 57.736 43.478 0.00 0.00 31.89 3.46
7341 8087 4.709886 TCATCATCCGTTAAGTCTCCTTCA 59.290 41.667 0.00 0.00 31.89 3.02
7342 8088 5.186992 TCATCATCCGTTAAGTCTCCTTCAA 59.813 40.000 0.00 0.00 31.89 2.69
7343 8089 5.477607 TCATCCGTTAAGTCTCCTTCAAA 57.522 39.130 0.00 0.00 31.89 2.69
7344 8090 5.860611 TCATCCGTTAAGTCTCCTTCAAAA 58.139 37.500 0.00 0.00 31.89 2.44
7345 8091 6.292923 TCATCCGTTAAGTCTCCTTCAAAAA 58.707 36.000 0.00 0.00 31.89 1.94
7346 8092 5.996669 TCCGTTAAGTCTCCTTCAAAAAC 57.003 39.130 0.00 0.00 31.89 2.43
7347 8093 4.818005 TCCGTTAAGTCTCCTTCAAAAACC 59.182 41.667 0.00 0.00 31.89 3.27
7348 8094 4.820173 CCGTTAAGTCTCCTTCAAAAACCT 59.180 41.667 0.00 0.00 31.89 3.50
7349 8095 5.298527 CCGTTAAGTCTCCTTCAAAAACCTT 59.701 40.000 0.00 0.00 31.89 3.50
7350 8096 6.199393 CGTTAAGTCTCCTTCAAAAACCTTG 58.801 40.000 0.00 0.00 31.89 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 16 2.204151 ACCAGGGACAAGAGGGGG 60.204 66.667 0.00 0.00 0.00 5.40
27 29 2.914289 GGGAGCCATGGAGACCAG 59.086 66.667 18.40 0.00 36.75 4.00
90 98 2.798847 AGAAAACAGGAACGCGAAGTAC 59.201 45.455 15.93 0.00 0.00 2.73
93 101 1.069906 CCAGAAAACAGGAACGCGAAG 60.070 52.381 15.93 0.00 0.00 3.79
135 145 1.267806 TCGGAGTTACGGATTATCGGC 59.732 52.381 0.00 0.00 0.00 5.54
140 150 3.635373 AGCTCAATCGGAGTTACGGATTA 59.365 43.478 0.00 0.00 45.88 1.75
141 151 2.431057 AGCTCAATCGGAGTTACGGATT 59.569 45.455 0.00 0.00 45.88 3.01
184 194 3.058639 GGCCGCAAGAAAGCTAATATCTG 60.059 47.826 0.00 0.00 43.02 2.90
185 198 3.142174 GGCCGCAAGAAAGCTAATATCT 58.858 45.455 0.00 0.00 43.02 1.98
236 250 4.047059 CTTGGCAGGCTTGTGGCG 62.047 66.667 0.00 0.00 45.86 5.69
252 266 2.822637 CCCATACCCAGGATGCGCT 61.823 63.158 9.73 0.00 31.97 5.92
258 272 3.087253 CGTGCCCCATACCCAGGA 61.087 66.667 0.00 0.00 0.00 3.86
295 311 1.383523 ATGCGAGACGATGTCTGAGA 58.616 50.000 3.85 0.00 43.53 3.27
301 317 2.159043 AGGAATCAATGCGAGACGATGT 60.159 45.455 0.00 0.00 0.00 3.06
356 373 9.814899 TCCAAATGCGATAAAAATTAATGATGT 57.185 25.926 0.00 0.00 0.00 3.06
359 376 9.868277 AAGTCCAAATGCGATAAAAATTAATGA 57.132 25.926 0.00 0.00 0.00 2.57
363 380 7.531716 ACGAAGTCCAAATGCGATAAAAATTA 58.468 30.769 0.00 0.00 29.74 1.40
414 431 8.550376 GTCAGTTCATATTTGTTGCATGTTTTT 58.450 29.630 0.00 0.00 0.00 1.94
446 463 4.098960 GGGACTAACGTATTGATCCAGTGA 59.901 45.833 0.00 0.00 0.00 3.41
528 547 9.622004 TCTCCGTCGTATCTATAATTTTTGATC 57.378 33.333 0.00 0.00 0.00 2.92
566 585 3.615056 GGAAAACGTGAAAAACCACAAGG 59.385 43.478 0.00 0.00 42.21 3.61
567 586 4.326009 CAGGAAAACGTGAAAAACCACAAG 59.674 41.667 0.00 0.00 36.89 3.16
568 587 4.238514 CAGGAAAACGTGAAAAACCACAA 58.761 39.130 0.00 0.00 36.89 3.33
569 588 3.256136 ACAGGAAAACGTGAAAAACCACA 59.744 39.130 0.00 0.00 36.89 4.17
570 589 3.840468 ACAGGAAAACGTGAAAAACCAC 58.160 40.909 0.00 0.00 0.00 4.16
571 590 4.238514 CAACAGGAAAACGTGAAAAACCA 58.761 39.130 0.00 0.00 0.00 3.67
572 591 4.090786 CACAACAGGAAAACGTGAAAAACC 59.909 41.667 0.00 0.00 0.00 3.27
573 592 4.682401 ACACAACAGGAAAACGTGAAAAAC 59.318 37.500 0.00 0.00 0.00 2.43
574 593 4.872664 ACACAACAGGAAAACGTGAAAAA 58.127 34.783 0.00 0.00 0.00 1.94
575 594 4.506886 ACACAACAGGAAAACGTGAAAA 57.493 36.364 0.00 0.00 0.00 2.29
576 595 4.216687 AGAACACAACAGGAAAACGTGAAA 59.783 37.500 0.00 0.00 0.00 2.69
577 596 3.754323 AGAACACAACAGGAAAACGTGAA 59.246 39.130 0.00 0.00 0.00 3.18
578 597 3.340034 AGAACACAACAGGAAAACGTGA 58.660 40.909 0.00 0.00 0.00 4.35
579 598 3.757745 AGAACACAACAGGAAAACGTG 57.242 42.857 0.00 0.00 0.00 4.49
580 599 3.181514 CGAAGAACACAACAGGAAAACGT 60.182 43.478 0.00 0.00 0.00 3.99
581 600 3.181514 ACGAAGAACACAACAGGAAAACG 60.182 43.478 0.00 0.00 0.00 3.60
582 601 4.095610 CACGAAGAACACAACAGGAAAAC 58.904 43.478 0.00 0.00 0.00 2.43
583 602 3.754323 ACACGAAGAACACAACAGGAAAA 59.246 39.130 0.00 0.00 0.00 2.29
584 603 3.340034 ACACGAAGAACACAACAGGAAA 58.660 40.909 0.00 0.00 0.00 3.13
585 604 2.980568 ACACGAAGAACACAACAGGAA 58.019 42.857 0.00 0.00 0.00 3.36
586 605 2.684001 ACACGAAGAACACAACAGGA 57.316 45.000 0.00 0.00 0.00 3.86
587 606 2.936498 AGAACACGAAGAACACAACAGG 59.064 45.455 0.00 0.00 0.00 4.00
588 607 4.578601 GAAGAACACGAAGAACACAACAG 58.421 43.478 0.00 0.00 0.00 3.16
589 608 3.061563 CGAAGAACACGAAGAACACAACA 59.938 43.478 0.00 0.00 0.00 3.33
590 609 3.543460 CCGAAGAACACGAAGAACACAAC 60.543 47.826 0.00 0.00 0.00 3.32
591 610 2.605818 CCGAAGAACACGAAGAACACAA 59.394 45.455 0.00 0.00 0.00 3.33
592 611 2.198406 CCGAAGAACACGAAGAACACA 58.802 47.619 0.00 0.00 0.00 3.72
593 612 1.525619 CCCGAAGAACACGAAGAACAC 59.474 52.381 0.00 0.00 0.00 3.32
594 613 1.137479 ACCCGAAGAACACGAAGAACA 59.863 47.619 0.00 0.00 0.00 3.18
595 614 1.861971 ACCCGAAGAACACGAAGAAC 58.138 50.000 0.00 0.00 0.00 3.01
596 615 2.607631 AACCCGAAGAACACGAAGAA 57.392 45.000 0.00 0.00 0.00 2.52
597 616 2.476821 GAAACCCGAAGAACACGAAGA 58.523 47.619 0.00 0.00 0.00 2.87
598 617 1.529865 GGAAACCCGAAGAACACGAAG 59.470 52.381 0.00 0.00 0.00 3.79
599 618 1.585297 GGAAACCCGAAGAACACGAA 58.415 50.000 0.00 0.00 0.00 3.85
600 619 3.294079 GGAAACCCGAAGAACACGA 57.706 52.632 0.00 0.00 0.00 4.35
618 637 4.578871 GATTTTTCACAAATTGGAGGGGG 58.421 43.478 0.00 0.00 0.00 5.40
619 638 4.244862 CGATTTTTCACAAATTGGAGGGG 58.755 43.478 0.00 0.00 0.00 4.79
620 639 3.679502 GCGATTTTTCACAAATTGGAGGG 59.320 43.478 0.00 0.00 0.00 4.30
621 640 4.559153 AGCGATTTTTCACAAATTGGAGG 58.441 39.130 0.00 0.00 0.00 4.30
622 641 5.287035 GCTAGCGATTTTTCACAAATTGGAG 59.713 40.000 0.00 0.00 0.00 3.86
623 642 5.048083 AGCTAGCGATTTTTCACAAATTGGA 60.048 36.000 9.55 0.00 0.00 3.53
624 643 5.163513 AGCTAGCGATTTTTCACAAATTGG 58.836 37.500 9.55 0.00 0.00 3.16
625 644 6.470235 CCTAGCTAGCGATTTTTCACAAATTG 59.530 38.462 15.74 0.00 0.00 2.32
626 645 6.404734 CCCTAGCTAGCGATTTTTCACAAATT 60.405 38.462 15.74 0.00 0.00 1.82
627 646 5.066505 CCCTAGCTAGCGATTTTTCACAAAT 59.933 40.000 15.74 0.00 0.00 2.32
628 647 4.394920 CCCTAGCTAGCGATTTTTCACAAA 59.605 41.667 15.74 0.00 0.00 2.83
629 648 3.938963 CCCTAGCTAGCGATTTTTCACAA 59.061 43.478 15.74 0.00 0.00 3.33
630 649 3.531538 CCCTAGCTAGCGATTTTTCACA 58.468 45.455 15.74 0.00 0.00 3.58
631 650 2.288186 GCCCTAGCTAGCGATTTTTCAC 59.712 50.000 15.74 0.00 35.50 3.18
632 651 2.561569 GCCCTAGCTAGCGATTTTTCA 58.438 47.619 15.74 0.00 35.50 2.69
651 670 0.179045 ACGATGATGTAGGGCCAAGC 60.179 55.000 6.18 0.00 0.00 4.01
652 671 1.134401 ACACGATGATGTAGGGCCAAG 60.134 52.381 6.18 0.00 0.00 3.61
653 672 0.908910 ACACGATGATGTAGGGCCAA 59.091 50.000 6.18 0.00 0.00 4.52
654 673 0.177836 CACACGATGATGTAGGGCCA 59.822 55.000 6.18 0.00 0.00 5.36
655 674 0.178068 ACACACGATGATGTAGGGCC 59.822 55.000 0.00 0.00 0.00 5.80
656 675 1.290203 CACACACGATGATGTAGGGC 58.710 55.000 0.00 0.00 0.00 5.19
657 676 2.270923 CACACACACGATGATGTAGGG 58.729 52.381 0.00 0.00 0.00 3.53
658 677 2.270923 CCACACACACGATGATGTAGG 58.729 52.381 0.00 0.00 0.00 3.18
659 678 2.270923 CCCACACACACGATGATGTAG 58.729 52.381 0.00 0.00 0.00 2.74
660 679 1.674519 GCCCACACACACGATGATGTA 60.675 52.381 0.00 0.00 0.00 2.29
661 680 0.955428 GCCCACACACACGATGATGT 60.955 55.000 0.00 0.00 0.00 3.06
662 681 1.796151 GCCCACACACACGATGATG 59.204 57.895 0.00 0.00 0.00 3.07
663 682 1.741401 CGCCCACACACACGATGAT 60.741 57.895 0.00 0.00 0.00 2.45
664 683 2.356913 CGCCCACACACACGATGA 60.357 61.111 0.00 0.00 0.00 2.92
665 684 3.422303 CCGCCCACACACACGATG 61.422 66.667 0.00 0.00 0.00 3.84
666 685 3.876589 GACCGCCCACACACACGAT 62.877 63.158 0.00 0.00 0.00 3.73
667 686 4.595538 GACCGCCCACACACACGA 62.596 66.667 0.00 0.00 0.00 4.35
687 706 2.590007 CTGGCTCAGGCATACGGC 60.590 66.667 0.00 0.00 40.87 5.68
688 707 2.109799 CCTGGCTCAGGCATACGG 59.890 66.667 0.00 0.00 45.13 4.02
702 721 4.988598 AACAGCCCGCACGTCCTG 62.989 66.667 0.00 5.87 0.00 3.86
703 722 4.250305 AAACAGCCCGCACGTCCT 62.250 61.111 0.00 0.00 0.00 3.85
704 723 4.025401 CAAACAGCCCGCACGTCC 62.025 66.667 0.00 0.00 0.00 4.79
705 724 4.025401 CCAAACAGCCCGCACGTC 62.025 66.667 0.00 0.00 0.00 4.34
714 733 0.040425 CAGTTGTACGGCCAAACAGC 60.040 55.000 11.90 11.90 0.00 4.40
715 734 1.263217 GTCAGTTGTACGGCCAAACAG 59.737 52.381 2.24 0.00 0.00 3.16
716 735 1.301423 GTCAGTTGTACGGCCAAACA 58.699 50.000 2.24 2.72 0.00 2.83
717 736 1.301423 TGTCAGTTGTACGGCCAAAC 58.699 50.000 2.24 0.00 0.00 2.93
718 737 1.671845 GTTGTCAGTTGTACGGCCAAA 59.328 47.619 2.24 0.00 0.00 3.28
719 738 1.134340 AGTTGTCAGTTGTACGGCCAA 60.134 47.619 2.24 0.00 0.00 4.52
720 739 0.466543 AGTTGTCAGTTGTACGGCCA 59.533 50.000 2.24 0.00 0.00 5.36
721 740 1.145803 GAGTTGTCAGTTGTACGGCC 58.854 55.000 0.00 0.00 0.00 6.13
722 741 0.782384 CGAGTTGTCAGTTGTACGGC 59.218 55.000 0.00 0.00 0.00 5.68
723 742 2.129823 ACGAGTTGTCAGTTGTACGG 57.870 50.000 0.00 0.00 0.00 4.02
724 743 2.150611 CGAACGAGTTGTCAGTTGTACG 59.849 50.000 0.00 0.00 0.00 3.67
725 744 3.179206 GTCGAACGAGTTGTCAGTTGTAC 59.821 47.826 0.00 0.00 0.00 2.90
726 745 3.181498 TGTCGAACGAGTTGTCAGTTGTA 60.181 43.478 0.00 0.00 0.00 2.41
727 746 2.190981 GTCGAACGAGTTGTCAGTTGT 58.809 47.619 0.00 0.00 0.00 3.32
728 747 2.034842 GTGTCGAACGAGTTGTCAGTTG 60.035 50.000 0.00 0.00 0.00 3.16
729 748 2.190981 GTGTCGAACGAGTTGTCAGTT 58.809 47.619 0.00 0.00 0.00 3.16
730 749 1.836383 GTGTCGAACGAGTTGTCAGT 58.164 50.000 0.00 0.00 0.00 3.41
741 760 3.425577 TGTATATGGACCGTGTCGAAC 57.574 47.619 0.00 0.00 32.65 3.95
742 761 3.304190 CGATGTATATGGACCGTGTCGAA 60.304 47.826 0.00 0.00 32.65 3.71
743 762 2.224784 CGATGTATATGGACCGTGTCGA 59.775 50.000 0.00 0.00 32.65 4.20
744 763 2.581637 CGATGTATATGGACCGTGTCG 58.418 52.381 0.00 0.00 32.65 4.35
745 764 2.287970 TGCGATGTATATGGACCGTGTC 60.288 50.000 0.00 0.00 0.00 3.67
746 765 1.684450 TGCGATGTATATGGACCGTGT 59.316 47.619 0.00 0.00 0.00 4.49
747 766 2.058798 GTGCGATGTATATGGACCGTG 58.941 52.381 0.00 0.00 0.00 4.94
748 767 1.335597 CGTGCGATGTATATGGACCGT 60.336 52.381 0.00 0.00 0.00 4.83
749 768 1.335597 ACGTGCGATGTATATGGACCG 60.336 52.381 0.00 0.00 0.00 4.79
750 769 2.433868 ACGTGCGATGTATATGGACC 57.566 50.000 0.00 0.00 0.00 4.46
751 770 2.404029 CGAACGTGCGATGTATATGGAC 59.596 50.000 11.51 0.00 0.00 4.02
752 771 2.606065 CCGAACGTGCGATGTATATGGA 60.606 50.000 19.93 0.00 0.00 3.41
753 772 1.719246 CCGAACGTGCGATGTATATGG 59.281 52.381 19.93 0.00 0.00 2.74
754 773 2.153057 CACCGAACGTGCGATGTATATG 59.847 50.000 19.93 0.00 35.18 1.78
755 774 2.033675 TCACCGAACGTGCGATGTATAT 59.966 45.455 19.93 0.00 42.69 0.86
756 775 1.401199 TCACCGAACGTGCGATGTATA 59.599 47.619 19.93 0.00 42.69 1.47
757 776 0.171679 TCACCGAACGTGCGATGTAT 59.828 50.000 19.93 0.00 42.69 2.29
758 777 0.039346 TTCACCGAACGTGCGATGTA 60.039 50.000 19.93 0.00 42.69 2.29
759 778 0.669318 ATTCACCGAACGTGCGATGT 60.669 50.000 19.93 4.46 42.69 3.06
760 779 0.442310 AATTCACCGAACGTGCGATG 59.558 50.000 19.93 11.93 42.69 3.84
761 780 1.657094 GTAATTCACCGAACGTGCGAT 59.343 47.619 19.93 0.00 42.69 4.58
762 781 1.062258 GTAATTCACCGAACGTGCGA 58.938 50.000 19.93 0.00 42.69 5.10
763 782 0.246603 CGTAATTCACCGAACGTGCG 60.247 55.000 9.60 9.60 42.69 5.34
764 783 0.094046 CCGTAATTCACCGAACGTGC 59.906 55.000 0.00 0.00 42.69 5.34
765 784 0.094046 GCCGTAATTCACCGAACGTG 59.906 55.000 0.00 0.00 44.50 4.49
766 785 0.319727 TGCCGTAATTCACCGAACGT 60.320 50.000 0.00 0.00 33.63 3.99
767 786 1.003851 ATGCCGTAATTCACCGAACG 58.996 50.000 0.00 0.00 35.20 3.95
768 787 1.329599 GGATGCCGTAATTCACCGAAC 59.670 52.381 0.00 0.00 0.00 3.95
769 788 1.066071 TGGATGCCGTAATTCACCGAA 60.066 47.619 0.00 0.00 0.00 4.30
770 789 0.537653 TGGATGCCGTAATTCACCGA 59.462 50.000 0.00 0.00 0.00 4.69
771 790 1.374560 TTGGATGCCGTAATTCACCG 58.625 50.000 0.00 0.00 0.00 4.94
772 791 4.134563 AGTATTGGATGCCGTAATTCACC 58.865 43.478 0.00 0.00 0.00 4.02
773 792 5.751243 AAGTATTGGATGCCGTAATTCAC 57.249 39.130 0.00 0.00 0.00 3.18
774 793 9.733556 ATAATAAGTATTGGATGCCGTAATTCA 57.266 29.630 0.00 0.00 0.00 2.57
776 795 9.174166 GGATAATAAGTATTGGATGCCGTAATT 57.826 33.333 0.00 0.00 0.00 1.40
777 796 8.325787 TGGATAATAAGTATTGGATGCCGTAAT 58.674 33.333 0.00 0.00 0.00 1.89
778 797 7.681679 TGGATAATAAGTATTGGATGCCGTAA 58.318 34.615 0.00 0.00 0.00 3.18
779 798 7.247456 TGGATAATAAGTATTGGATGCCGTA 57.753 36.000 0.00 0.00 0.00 4.02
780 799 6.121776 TGGATAATAAGTATTGGATGCCGT 57.878 37.500 0.00 0.00 0.00 5.68
781 800 7.447374 TTTGGATAATAAGTATTGGATGCCG 57.553 36.000 0.00 0.00 0.00 5.69
782 801 9.860898 GAATTTGGATAATAAGTATTGGATGCC 57.139 33.333 0.00 0.00 0.00 4.40
801 820 8.850454 TCAAAAACTAAAAGACGAGAATTTGG 57.150 30.769 0.00 0.00 0.00 3.28
864 883 5.734855 AGGTTTTCAATATTCGGTCATCG 57.265 39.130 0.00 0.00 40.90 3.84
1006 1057 1.469423 GGCTCCTAAAGAACTCGTCGG 60.469 57.143 0.00 0.00 0.00 4.79
1149 1200 1.542492 GGACTGAGTGTTACGAGGGA 58.458 55.000 0.00 0.00 0.00 4.20
1184 1236 0.035056 ACCAAATCGCAAGGGAGGAG 60.035 55.000 0.00 0.00 38.47 3.69
1195 1247 3.941483 AGCTGATTCCTAACACCAAATCG 59.059 43.478 0.00 0.00 32.09 3.34
1232 1284 0.471591 TCAACCCCAGGCAATTGCTT 60.472 50.000 28.42 20.02 41.70 3.91
1287 1339 4.160626 ACCAAACCAAACCAAATTCGAAGA 59.839 37.500 3.35 0.00 0.00 2.87
1321 1373 8.764524 AAGTGTTACTCAAACTCAGCTATTAG 57.235 34.615 0.00 0.00 38.99 1.73
1394 1448 6.072673 GGAGTTCAAATTGACGGATTTGTAGT 60.073 38.462 15.85 11.61 43.89 2.73
1530 1584 3.741344 ACGAGTTGACTGAAAAGGAATCG 59.259 43.478 0.00 0.00 0.00 3.34
1619 1685 5.407502 TCCACATATCAGACGTTAACACAG 58.592 41.667 6.39 0.00 0.00 3.66
1683 1749 7.678947 AGATTAGGAAGGAAAATGCATATCG 57.321 36.000 0.00 0.00 0.00 2.92
1822 1888 0.665298 GATCGAGCAAATGGGAAGCC 59.335 55.000 0.00 0.00 0.00 4.35
1931 1997 2.356793 CTGCTCGATCCGGCATCC 60.357 66.667 0.00 0.00 37.83 3.51
1949 2015 2.697263 ATGGATGGCCCTGCTCCA 60.697 61.111 13.81 13.81 42.95 3.86
2080 2146 6.915786 AGTATATTTTCCAGAGCTCCCAAAT 58.084 36.000 10.93 11.77 0.00 2.32
2249 2315 1.447838 GCGAGTTTCTCATGGCCGA 60.448 57.895 0.00 0.00 0.00 5.54
2259 2325 4.083862 AGGGCCGGAGCGAGTTTC 62.084 66.667 5.05 0.00 41.24 2.78
2519 2585 3.423539 TCAATCTAGGCAAGCACAACT 57.576 42.857 0.00 0.00 0.00 3.16
2574 2640 2.433868 TTGAAAACTCTCCTCGACCG 57.566 50.000 0.00 0.00 0.00 4.79
2792 2858 0.467290 TTTGTTCCTGGCCACCACTC 60.467 55.000 0.00 0.00 0.00 3.51
2814 2880 1.003118 TCGGCTACATTTGCAAGGAGT 59.997 47.619 0.00 2.49 0.00 3.85
2902 2968 0.321298 GGGAAGCGGCTGTTTCAGTA 60.321 55.000 21.76 0.00 37.08 2.74
2990 3056 4.277258 CGCTGCACTGAATTGATCAATAC 58.723 43.478 21.00 7.71 37.67 1.89
3027 3093 3.815401 ACCAGCAGTACAAGAACATGAAC 59.185 43.478 0.00 0.00 0.00 3.18
3056 3122 2.348666 CACCTAACGAGCAGTGCATAAC 59.651 50.000 19.20 4.80 0.00 1.89
3068 3134 0.245539 CGCCTTCTTCCACCTAACGA 59.754 55.000 0.00 0.00 0.00 3.85
3097 3163 1.739562 GCACGGCCTTCACAGAGAG 60.740 63.158 0.00 0.00 0.00 3.20
3385 3452 0.669619 TCACGAAGCACCTACACGAA 59.330 50.000 0.00 0.00 0.00 3.85
3504 3571 2.124736 AGGTGCGCCGCAATACAT 60.125 55.556 15.84 0.00 41.47 2.29
3567 3634 2.863484 ACCCCAAGCCCATGTGGA 60.863 61.111 0.00 0.00 37.03 4.02
3595 3662 2.679342 GCCTGGCCCATCACCACTA 61.679 63.158 7.66 0.00 32.49 2.74
3885 3952 6.798427 AGTGACTGATGTACCAGTATCATT 57.202 37.500 4.94 0.00 46.45 2.57
3894 3961 3.863142 ACCGTTAGTGACTGATGTACC 57.137 47.619 0.00 0.00 0.00 3.34
3936 4004 5.588648 GGCTACTTGTCAAAATGCTGGTATA 59.411 40.000 0.00 0.00 0.00 1.47
4078 4146 2.239654 CCCAGCAAAATAGGACTCTGGA 59.760 50.000 7.58 0.00 42.64 3.86
4116 4184 4.278419 GGGTGCATAACATTATGACCTTCC 59.722 45.833 20.53 12.80 42.38 3.46
4755 4823 2.666272 TGTTGTACCATGCCCTTTGA 57.334 45.000 0.00 0.00 0.00 2.69
5182 5253 1.180456 TGCCCACCTCAACATGCAAG 61.180 55.000 0.00 0.00 0.00 4.01
5618 5690 4.351407 TCCAGGGGTAAGTTCAATGTACAA 59.649 41.667 0.00 0.00 0.00 2.41
5645 5717 1.287503 GAATTCCCGTTTTGGCGCA 59.712 52.632 10.83 0.00 35.87 6.09
6276 6392 7.686859 GCACTGGAACCTATAACAGATGATACA 60.687 40.741 0.00 0.00 35.08 2.29
6420 6537 0.904865 AATGCTGAGGTCAGGGTCGA 60.905 55.000 9.03 0.00 43.94 4.20
6568 6685 7.948278 CCACACGGGAAACAAAATATTTTTA 57.052 32.000 10.77 0.00 40.01 1.52
6569 6686 6.852858 CCACACGGGAAACAAAATATTTTT 57.147 33.333 10.77 0.00 40.01 1.94
6806 7551 3.490759 GCATCGCCTCCACACACG 61.491 66.667 0.00 0.00 0.00 4.49
6980 7725 2.954753 GACGCGACAGTTGCCTTGG 61.955 63.158 15.93 0.00 0.00 3.61
7052 7798 1.607148 TCGCTCGTCTCTCTTTCAACA 59.393 47.619 0.00 0.00 0.00 3.33
7053 7799 2.095668 TCTCGCTCGTCTCTCTTTCAAC 60.096 50.000 0.00 0.00 0.00 3.18
7054 7800 2.152016 TCTCGCTCGTCTCTCTTTCAA 58.848 47.619 0.00 0.00 0.00 2.69
7055 7801 1.735018 CTCTCGCTCGTCTCTCTTTCA 59.265 52.381 0.00 0.00 0.00 2.69
7056 7802 2.004017 TCTCTCGCTCGTCTCTCTTTC 58.996 52.381 0.00 0.00 0.00 2.62
7057 7803 2.006888 CTCTCTCGCTCGTCTCTCTTT 58.993 52.381 0.00 0.00 0.00 2.52
7058 7804 1.206132 TCTCTCTCGCTCGTCTCTCTT 59.794 52.381 0.00 0.00 0.00 2.85
7059 7805 0.821517 TCTCTCTCGCTCGTCTCTCT 59.178 55.000 0.00 0.00 0.00 3.10
7060 7806 0.928229 GTCTCTCTCGCTCGTCTCTC 59.072 60.000 0.00 0.00 0.00 3.20
7061 7807 0.248012 TGTCTCTCTCGCTCGTCTCT 59.752 55.000 0.00 0.00 0.00 3.10
7062 7808 1.080298 TTGTCTCTCTCGCTCGTCTC 58.920 55.000 0.00 0.00 0.00 3.36
7063 7809 0.800012 GTTGTCTCTCTCGCTCGTCT 59.200 55.000 0.00 0.00 0.00 4.18
7064 7810 0.517755 TGTTGTCTCTCTCGCTCGTC 59.482 55.000 0.00 0.00 0.00 4.20
7065 7811 0.952280 TTGTTGTCTCTCTCGCTCGT 59.048 50.000 0.00 0.00 0.00 4.18
7066 7812 2.051879 TTTGTTGTCTCTCTCGCTCG 57.948 50.000 0.00 0.00 0.00 5.03
7067 7813 3.579709 TCATTTGTTGTCTCTCTCGCTC 58.420 45.455 0.00 0.00 0.00 5.03
7068 7814 3.667497 TCATTTGTTGTCTCTCTCGCT 57.333 42.857 0.00 0.00 0.00 4.93
7069 7815 4.389992 TGAATCATTTGTTGTCTCTCTCGC 59.610 41.667 0.00 0.00 0.00 5.03
7070 7816 6.146837 AGTTGAATCATTTGTTGTCTCTCTCG 59.853 38.462 0.00 0.00 0.00 4.04
7071 7817 7.041508 ACAGTTGAATCATTTGTTGTCTCTCTC 60.042 37.037 0.00 0.00 0.00 3.20
7072 7818 6.769822 ACAGTTGAATCATTTGTTGTCTCTCT 59.230 34.615 0.00 0.00 0.00 3.10
7073 7819 6.854892 CACAGTTGAATCATTTGTTGTCTCTC 59.145 38.462 0.00 0.00 0.00 3.20
7074 7820 6.319658 ACACAGTTGAATCATTTGTTGTCTCT 59.680 34.615 0.00 0.00 0.00 3.10
7075 7821 6.498304 ACACAGTTGAATCATTTGTTGTCTC 58.502 36.000 0.00 0.00 0.00 3.36
7076 7822 6.455360 ACACAGTTGAATCATTTGTTGTCT 57.545 33.333 0.00 0.00 0.00 3.41
7077 7823 8.801715 AATACACAGTTGAATCATTTGTTGTC 57.198 30.769 0.00 0.00 0.00 3.18
7078 7824 8.632679 AGAATACACAGTTGAATCATTTGTTGT 58.367 29.630 0.00 3.93 0.00 3.32
7079 7825 9.467258 AAGAATACACAGTTGAATCATTTGTTG 57.533 29.630 0.00 0.00 0.00 3.33
7112 7858 8.773645 CGTTCCATTGTATATAAGCTTCAATCA 58.226 33.333 0.00 0.00 0.00 2.57
7113 7859 8.230486 CCGTTCCATTGTATATAAGCTTCAATC 58.770 37.037 0.00 0.00 0.00 2.67
7114 7860 7.719633 ACCGTTCCATTGTATATAAGCTTCAAT 59.280 33.333 0.00 3.11 0.00 2.57
7115 7861 7.051623 ACCGTTCCATTGTATATAAGCTTCAA 58.948 34.615 0.00 0.29 0.00 2.69
7116 7862 6.588204 ACCGTTCCATTGTATATAAGCTTCA 58.412 36.000 0.00 0.00 0.00 3.02
7117 7863 7.352739 CAACCGTTCCATTGTATATAAGCTTC 58.647 38.462 0.00 0.00 0.00 3.86
7118 7864 6.238648 GCAACCGTTCCATTGTATATAAGCTT 60.239 38.462 3.48 3.48 0.00 3.74
7119 7865 5.238650 GCAACCGTTCCATTGTATATAAGCT 59.761 40.000 0.00 0.00 0.00 3.74
7120 7866 5.449304 GCAACCGTTCCATTGTATATAAGC 58.551 41.667 0.00 0.00 0.00 3.09
7121 7867 5.763204 AGGCAACCGTTCCATTGTATATAAG 59.237 40.000 0.00 0.00 37.17 1.73
7122 7868 5.686753 AGGCAACCGTTCCATTGTATATAA 58.313 37.500 0.00 0.00 37.17 0.98
7123 7869 5.298989 AGGCAACCGTTCCATTGTATATA 57.701 39.130 0.00 0.00 37.17 0.86
7124 7870 4.134563 GAGGCAACCGTTCCATTGTATAT 58.865 43.478 0.00 0.00 37.17 0.86
7125 7871 3.537580 GAGGCAACCGTTCCATTGTATA 58.462 45.455 0.00 0.00 37.17 1.47
7126 7872 2.365582 GAGGCAACCGTTCCATTGTAT 58.634 47.619 0.00 0.00 37.17 2.29
7127 7873 1.612199 GGAGGCAACCGTTCCATTGTA 60.612 52.381 0.00 0.00 37.17 2.41
7128 7874 0.893727 GGAGGCAACCGTTCCATTGT 60.894 55.000 0.00 0.00 37.17 2.71
7129 7875 1.883021 GGAGGCAACCGTTCCATTG 59.117 57.895 0.00 0.00 37.17 2.82
7130 7876 1.674322 CGGAGGCAACCGTTCCATT 60.674 57.895 13.48 0.00 46.70 3.16
7131 7877 2.046314 CGGAGGCAACCGTTCCAT 60.046 61.111 13.48 0.00 46.70 3.41
7147 7893 4.493747 GAACCGTCGCCTCCCTCG 62.494 72.222 0.00 0.00 0.00 4.63
7148 7894 4.493747 CGAACCGTCGCCTCCCTC 62.494 72.222 0.00 0.00 41.08 4.30
7165 7911 1.452145 CCTAGAGAGACGCCTCCAGC 61.452 65.000 0.00 0.00 40.30 4.85
7166 7912 1.452145 GCCTAGAGAGACGCCTCCAG 61.452 65.000 0.00 0.00 40.30 3.86
7167 7913 1.454111 GCCTAGAGAGACGCCTCCA 60.454 63.158 0.00 0.00 40.30 3.86
7168 7914 1.152839 AGCCTAGAGAGACGCCTCC 60.153 63.158 0.00 0.00 40.30 4.30
7169 7915 0.750182 ACAGCCTAGAGAGACGCCTC 60.750 60.000 0.00 0.00 39.72 4.70
7170 7916 0.547075 TACAGCCTAGAGAGACGCCT 59.453 55.000 0.00 0.00 0.00 5.52
7171 7917 1.065851 GTTACAGCCTAGAGAGACGCC 59.934 57.143 0.00 0.00 0.00 5.68
7172 7918 1.065851 GGTTACAGCCTAGAGAGACGC 59.934 57.143 0.00 0.00 0.00 5.19
7173 7919 1.331138 CGGTTACAGCCTAGAGAGACG 59.669 57.143 0.00 0.00 0.00 4.18
7174 7920 2.355444 GTCGGTTACAGCCTAGAGAGAC 59.645 54.545 0.00 0.00 0.00 3.36
7175 7921 2.026542 TGTCGGTTACAGCCTAGAGAGA 60.027 50.000 0.00 0.00 33.01 3.10
7176 7922 2.097791 GTGTCGGTTACAGCCTAGAGAG 59.902 54.545 0.00 0.00 39.29 3.20
7177 7923 2.089980 GTGTCGGTTACAGCCTAGAGA 58.910 52.381 0.00 0.00 39.29 3.10
7178 7924 1.202154 CGTGTCGGTTACAGCCTAGAG 60.202 57.143 0.00 0.00 39.29 2.43
7179 7925 0.806868 CGTGTCGGTTACAGCCTAGA 59.193 55.000 0.00 0.00 39.29 2.43
7180 7926 0.806868 TCGTGTCGGTTACAGCCTAG 59.193 55.000 0.00 0.00 39.29 3.02
7181 7927 0.523072 GTCGTGTCGGTTACAGCCTA 59.477 55.000 0.00 0.00 39.29 3.93
7182 7928 1.288127 GTCGTGTCGGTTACAGCCT 59.712 57.895 0.00 0.00 39.29 4.58
7183 7929 2.084681 CGTCGTGTCGGTTACAGCC 61.085 63.158 0.00 0.00 39.29 4.85
7184 7930 2.084681 CCGTCGTGTCGGTTACAGC 61.085 63.158 7.90 0.00 44.77 4.40
7185 7931 4.141883 CCGTCGTGTCGGTTACAG 57.858 61.111 7.90 0.00 44.77 2.74
7192 7938 0.166597 TACTAGCAACCGTCGTGTCG 59.833 55.000 0.00 0.00 0.00 4.35
7193 7939 2.336554 TTACTAGCAACCGTCGTGTC 57.663 50.000 0.00 0.00 0.00 3.67
7194 7940 2.029649 ACATTACTAGCAACCGTCGTGT 60.030 45.455 0.00 0.00 0.00 4.49
7195 7941 2.344441 CACATTACTAGCAACCGTCGTG 59.656 50.000 0.00 0.00 0.00 4.35
7196 7942 2.602878 CACATTACTAGCAACCGTCGT 58.397 47.619 0.00 0.00 0.00 4.34
7197 7943 1.924524 CCACATTACTAGCAACCGTCG 59.075 52.381 0.00 0.00 0.00 5.12
7198 7944 3.241067 TCCACATTACTAGCAACCGTC 57.759 47.619 0.00 0.00 0.00 4.79
7199 7945 3.332034 GTTCCACATTACTAGCAACCGT 58.668 45.455 0.00 0.00 0.00 4.83
7200 7946 2.676342 GGTTCCACATTACTAGCAACCG 59.324 50.000 0.00 0.00 0.00 4.44
7201 7947 2.676342 CGGTTCCACATTACTAGCAACC 59.324 50.000 0.00 0.00 0.00 3.77
7202 7948 2.095372 GCGGTTCCACATTACTAGCAAC 59.905 50.000 0.00 0.00 0.00 4.17
7203 7949 2.289756 TGCGGTTCCACATTACTAGCAA 60.290 45.455 0.00 0.00 0.00 3.91
7204 7950 1.276705 TGCGGTTCCACATTACTAGCA 59.723 47.619 0.00 0.00 0.00 3.49
7205 7951 1.664151 GTGCGGTTCCACATTACTAGC 59.336 52.381 0.00 0.00 35.80 3.42
7206 7952 1.924524 CGTGCGGTTCCACATTACTAG 59.075 52.381 0.00 0.00 35.47 2.57
7207 7953 1.545136 TCGTGCGGTTCCACATTACTA 59.455 47.619 0.00 0.00 35.47 1.82
7208 7954 0.319083 TCGTGCGGTTCCACATTACT 59.681 50.000 0.00 0.00 35.47 2.24
7209 7955 0.719465 CTCGTGCGGTTCCACATTAC 59.281 55.000 0.00 0.00 35.47 1.89
7210 7956 0.319083 ACTCGTGCGGTTCCACATTA 59.681 50.000 0.00 0.00 35.47 1.90
7211 7957 1.070786 ACTCGTGCGGTTCCACATT 59.929 52.632 0.00 0.00 35.47 2.71
7212 7958 1.667830 CACTCGTGCGGTTCCACAT 60.668 57.895 0.00 0.00 35.47 3.21
7213 7959 2.279851 CACTCGTGCGGTTCCACA 60.280 61.111 0.00 0.00 35.47 4.17
7214 7960 2.022129 CTCACTCGTGCGGTTCCAC 61.022 63.158 0.00 0.00 0.00 4.02
7215 7961 1.740332 TTCTCACTCGTGCGGTTCCA 61.740 55.000 0.00 0.00 0.00 3.53
7216 7962 0.599204 TTTCTCACTCGTGCGGTTCC 60.599 55.000 0.00 0.00 0.00 3.62
7217 7963 0.784778 CTTTCTCACTCGTGCGGTTC 59.215 55.000 0.00 0.00 0.00 3.62
7218 7964 0.387929 TCTTTCTCACTCGTGCGGTT 59.612 50.000 0.00 0.00 0.00 4.44
7219 7965 0.039074 CTCTTTCTCACTCGTGCGGT 60.039 55.000 0.00 0.00 0.00 5.68
7220 7966 1.347817 GCTCTTTCTCACTCGTGCGG 61.348 60.000 0.00 0.00 0.00 5.69
7221 7967 1.669158 CGCTCTTTCTCACTCGTGCG 61.669 60.000 0.00 0.00 36.41 5.34
7222 7968 1.347817 CCGCTCTTTCTCACTCGTGC 61.348 60.000 0.00 0.00 0.00 5.34
7223 7969 0.734253 CCCGCTCTTTCTCACTCGTG 60.734 60.000 0.00 0.00 0.00 4.35
7224 7970 1.587054 CCCGCTCTTTCTCACTCGT 59.413 57.895 0.00 0.00 0.00 4.18
7225 7971 1.153745 CCCCGCTCTTTCTCACTCG 60.154 63.158 0.00 0.00 0.00 4.18
7226 7972 0.827368 ATCCCCGCTCTTTCTCACTC 59.173 55.000 0.00 0.00 0.00 3.51
7227 7973 1.280457 AATCCCCGCTCTTTCTCACT 58.720 50.000 0.00 0.00 0.00 3.41
7228 7974 2.981859 TAATCCCCGCTCTTTCTCAC 57.018 50.000 0.00 0.00 0.00 3.51
7229 7975 2.368875 GGATAATCCCCGCTCTTTCTCA 59.631 50.000 0.00 0.00 0.00 3.27
7230 7976 3.046968 GGATAATCCCCGCTCTTTCTC 57.953 52.381 0.00 0.00 0.00 2.87
7242 7988 4.881850 CCATGCGTTATTAGGGGATAATCC 59.118 45.833 0.00 0.00 35.63 3.01
7243 7989 4.881850 CCCATGCGTTATTAGGGGATAATC 59.118 45.833 0.00 0.00 37.80 1.75
7244 7990 4.291249 ACCCATGCGTTATTAGGGGATAAT 59.709 41.667 3.83 0.00 43.96 1.28
7245 7991 3.653836 ACCCATGCGTTATTAGGGGATAA 59.346 43.478 3.83 0.00 43.96 1.75
7246 7992 3.253220 ACCCATGCGTTATTAGGGGATA 58.747 45.455 3.83 0.00 43.96 2.59
7247 7993 2.062636 ACCCATGCGTTATTAGGGGAT 58.937 47.619 3.83 0.00 43.96 3.85
7248 7994 1.513858 ACCCATGCGTTATTAGGGGA 58.486 50.000 3.83 0.00 43.96 4.81
7249 7995 2.358322 AACCCATGCGTTATTAGGGG 57.642 50.000 3.48 0.00 43.96 4.79
7250 7996 7.610305 AGAATAATAACCCATGCGTTATTAGGG 59.390 37.037 27.26 9.01 46.51 3.53
7251 7997 8.561738 AGAATAATAACCCATGCGTTATTAGG 57.438 34.615 27.26 9.48 46.51 2.69
7252 7998 9.214957 TGAGAATAATAACCCATGCGTTATTAG 57.785 33.333 27.26 0.00 46.51 1.73
7253 7999 9.562408 TTGAGAATAATAACCCATGCGTTATTA 57.438 29.630 26.39 26.39 46.97 0.98
7254 8000 8.349983 GTTGAGAATAATAACCCATGCGTTATT 58.650 33.333 24.52 24.52 46.00 1.40
7255 8001 7.500892 TGTTGAGAATAATAACCCATGCGTTAT 59.499 33.333 9.50 9.50 39.97 1.89
7256 8002 6.824196 TGTTGAGAATAATAACCCATGCGTTA 59.176 34.615 5.46 5.46 32.94 3.18
7257 8003 5.650266 TGTTGAGAATAATAACCCATGCGTT 59.350 36.000 0.72 0.72 0.00 4.84
7258 8004 5.065988 GTGTTGAGAATAATAACCCATGCGT 59.934 40.000 0.00 0.00 0.00 5.24
7259 8005 5.296780 AGTGTTGAGAATAATAACCCATGCG 59.703 40.000 0.00 0.00 0.00 4.73
7260 8006 6.238759 GGAGTGTTGAGAATAATAACCCATGC 60.239 42.308 0.00 0.00 0.00 4.06
7261 8007 7.056635 AGGAGTGTTGAGAATAATAACCCATG 58.943 38.462 0.00 0.00 0.00 3.66
7262 8008 7.213178 AGGAGTGTTGAGAATAATAACCCAT 57.787 36.000 0.00 0.00 0.00 4.00
7263 8009 6.352737 GGAGGAGTGTTGAGAATAATAACCCA 60.353 42.308 0.00 0.00 0.00 4.51
7264 8010 6.056236 GGAGGAGTGTTGAGAATAATAACCC 58.944 44.000 0.00 0.00 0.00 4.11
7265 8011 6.890293 AGGAGGAGTGTTGAGAATAATAACC 58.110 40.000 0.00 0.00 0.00 2.85
7268 8014 9.434275 TGATTAGGAGGAGTGTTGAGAATAATA 57.566 33.333 0.00 0.00 0.00 0.98
7269 8015 8.207545 GTGATTAGGAGGAGTGTTGAGAATAAT 58.792 37.037 0.00 0.00 0.00 1.28
7270 8016 7.400339 AGTGATTAGGAGGAGTGTTGAGAATAA 59.600 37.037 0.00 0.00 0.00 1.40
7271 8017 6.897966 AGTGATTAGGAGGAGTGTTGAGAATA 59.102 38.462 0.00 0.00 0.00 1.75
7272 8018 5.723887 AGTGATTAGGAGGAGTGTTGAGAAT 59.276 40.000 0.00 0.00 0.00 2.40
7273 8019 5.047021 CAGTGATTAGGAGGAGTGTTGAGAA 60.047 44.000 0.00 0.00 0.00 2.87
7274 8020 4.464244 CAGTGATTAGGAGGAGTGTTGAGA 59.536 45.833 0.00 0.00 0.00 3.27
7275 8021 4.753233 CAGTGATTAGGAGGAGTGTTGAG 58.247 47.826 0.00 0.00 0.00 3.02
7276 8022 3.055819 GCAGTGATTAGGAGGAGTGTTGA 60.056 47.826 0.00 0.00 0.00 3.18
7277 8023 3.055530 AGCAGTGATTAGGAGGAGTGTTG 60.056 47.826 0.00 0.00 0.00 3.33
7278 8024 3.177228 AGCAGTGATTAGGAGGAGTGTT 58.823 45.455 0.00 0.00 0.00 3.32
7279 8025 2.826488 AGCAGTGATTAGGAGGAGTGT 58.174 47.619 0.00 0.00 0.00 3.55
7280 8026 3.196469 TCAAGCAGTGATTAGGAGGAGTG 59.804 47.826 0.00 0.00 0.00 3.51
7281 8027 3.196685 GTCAAGCAGTGATTAGGAGGAGT 59.803 47.826 0.00 0.00 38.90 3.85
7282 8028 3.450457 AGTCAAGCAGTGATTAGGAGGAG 59.550 47.826 0.00 0.00 38.90 3.69
7283 8029 3.196469 CAGTCAAGCAGTGATTAGGAGGA 59.804 47.826 0.00 0.00 38.90 3.71
7284 8030 3.529533 CAGTCAAGCAGTGATTAGGAGG 58.470 50.000 0.00 0.00 38.90 4.30
7285 8031 2.935201 GCAGTCAAGCAGTGATTAGGAG 59.065 50.000 0.00 0.00 38.90 3.69
7286 8032 2.302733 TGCAGTCAAGCAGTGATTAGGA 59.697 45.455 0.00 0.00 40.11 2.94
7287 8033 2.703416 TGCAGTCAAGCAGTGATTAGG 58.297 47.619 0.00 0.00 40.11 2.69
7297 8043 1.340017 TGGACCCTTATGCAGTCAAGC 60.340 52.381 5.52 0.00 31.99 4.01
7298 8044 2.787473 TGGACCCTTATGCAGTCAAG 57.213 50.000 5.52 2.60 31.99 3.02
7299 8045 2.575735 TGATGGACCCTTATGCAGTCAA 59.424 45.455 5.52 0.00 31.99 3.18
7300 8046 2.195727 TGATGGACCCTTATGCAGTCA 58.804 47.619 5.52 0.00 31.99 3.41
7301 8047 3.181451 TGATGATGGACCCTTATGCAGTC 60.181 47.826 0.00 0.00 0.00 3.51
7302 8048 2.779430 TGATGATGGACCCTTATGCAGT 59.221 45.455 0.00 0.00 0.00 4.40
7303 8049 3.497103 TGATGATGGACCCTTATGCAG 57.503 47.619 0.00 0.00 0.00 4.41
7304 8050 3.245016 GGATGATGATGGACCCTTATGCA 60.245 47.826 0.00 0.00 0.00 3.96
7305 8051 3.350833 GGATGATGATGGACCCTTATGC 58.649 50.000 0.00 0.00 0.00 3.14
7306 8052 3.008375 ACGGATGATGATGGACCCTTATG 59.992 47.826 0.00 0.00 0.00 1.90
7307 8053 3.251484 ACGGATGATGATGGACCCTTAT 58.749 45.455 0.00 0.00 0.00 1.73
7308 8054 2.689658 ACGGATGATGATGGACCCTTA 58.310 47.619 0.00 0.00 0.00 2.69
7309 8055 1.511613 ACGGATGATGATGGACCCTT 58.488 50.000 0.00 0.00 0.00 3.95
7310 8056 1.511613 AACGGATGATGATGGACCCT 58.488 50.000 0.00 0.00 0.00 4.34
7311 8057 3.181454 ACTTAACGGATGATGATGGACCC 60.181 47.826 0.00 0.00 0.00 4.46
7312 8058 4.058817 GACTTAACGGATGATGATGGACC 58.941 47.826 0.00 0.00 0.00 4.46
7313 8059 4.950050 AGACTTAACGGATGATGATGGAC 58.050 43.478 0.00 0.00 0.00 4.02
7314 8060 4.039245 GGAGACTTAACGGATGATGATGGA 59.961 45.833 0.00 0.00 0.00 3.41
7315 8061 4.039730 AGGAGACTTAACGGATGATGATGG 59.960 45.833 0.00 0.00 37.44 3.51
7316 8062 5.207110 AGGAGACTTAACGGATGATGATG 57.793 43.478 0.00 0.00 37.44 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.