Multiple sequence alignment - TraesCS3D01G195400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G195400 chr3D 100.000 5107 0 0 1 5107 189041648 189036542 0.000000e+00 9431.0
1 TraesCS3D01G195400 chr3D 87.736 424 36 11 4536 4949 482259338 482259755 9.940000e-132 481.0
2 TraesCS3D01G195400 chr3D 85.681 426 47 10 4536 4950 66737361 66737783 2.180000e-118 436.0
3 TraesCS3D01G195400 chr3D 85.446 426 46 11 4536 4949 44975873 44975452 3.650000e-116 429.0
4 TraesCS3D01G195400 chr3D 85.412 425 46 13 4536 4949 39619637 39619218 1.310000e-115 427.0
5 TraesCS3D01G195400 chr3D 85.280 428 41 13 4536 4949 19331555 19331974 6.110000e-114 422.0
6 TraesCS3D01G195400 chr3B 91.622 2053 45 37 93 2084 273242625 273240639 0.000000e+00 2721.0
7 TraesCS3D01G195400 chr3B 92.742 744 20 7 3618 4343 273238805 273238078 0.000000e+00 1044.0
8 TraesCS3D01G195400 chr3B 94.097 576 17 4 2982 3547 273239429 273238861 0.000000e+00 859.0
9 TraesCS3D01G195400 chr3B 95.238 504 13 7 2393 2890 273240381 273239883 0.000000e+00 787.0
10 TraesCS3D01G195400 chr3B 93.293 164 1 1 2147 2300 273240551 273240388 3.070000e-57 233.0
11 TraesCS3D01G195400 chr3B 83.857 223 16 1 4333 4535 273236292 273236070 1.450000e-45 195.0
12 TraesCS3D01G195400 chr3B 97.222 36 1 0 5064 5099 759791563 759791528 1.540000e-05 62.1
13 TraesCS3D01G195400 chr3B 96.875 32 1 0 5064 5095 761761778 761761747 3.000000e-03 54.7
14 TraesCS3D01G195400 chr3A 95.493 1176 29 9 2399 3560 248547525 248548690 0.000000e+00 1857.0
15 TraesCS3D01G195400 chr3A 90.854 1148 35 21 48 1136 248545307 248546443 0.000000e+00 1474.0
16 TraesCS3D01G195400 chr3A 98.759 564 7 0 1515 2078 248546713 248547276 0.000000e+00 1003.0
17 TraesCS3D01G195400 chr3A 85.773 977 35 25 3618 4535 248548709 248549640 0.000000e+00 939.0
18 TraesCS3D01G195400 chr3A 98.193 166 0 3 2147 2312 248547353 248547515 2.330000e-73 287.0
19 TraesCS3D01G195400 chr3A 79.079 239 19 17 1196 1404 248546447 248546684 8.920000e-28 135.0
20 TraesCS3D01G195400 chr3A 91.765 85 7 0 5023 5107 248549682 248549766 8.980000e-23 119.0
21 TraesCS3D01G195400 chr2A 88.180 423 33 12 4535 4948 592858968 592859382 5.940000e-134 488.0
22 TraesCS3D01G195400 chr2D 86.429 420 43 8 4535 4942 605912839 605913256 1.010000e-121 448.0
23 TraesCS3D01G195400 chr4B 86.085 424 46 10 4535 4949 68886666 68887085 1.300000e-120 444.0
24 TraesCS3D01G195400 chr4B 92.537 67 4 1 2332 2398 586994189 586994254 1.510000e-15 95.3
25 TraesCS3D01G195400 chr4B 91.525 59 2 1 2340 2398 454036644 454036589 1.520000e-10 78.7
26 TraesCS3D01G195400 chr4D 85.412 425 46 10 4535 4948 485407157 485406738 1.310000e-115 427.0
27 TraesCS3D01G195400 chr7B 96.667 60 1 1 2340 2399 750583996 750584054 1.170000e-16 99.0
28 TraesCS3D01G195400 chr7B 100.000 29 0 0 745 773 596474778 596474750 3.000000e-03 54.7
29 TraesCS3D01G195400 chr7D 95.000 60 2 1 2340 2399 597043610 597043668 5.440000e-15 93.5
30 TraesCS3D01G195400 chr7D 95.455 44 2 0 5064 5107 166787 166830 2.550000e-08 71.3
31 TraesCS3D01G195400 chr5B 94.828 58 2 1 2341 2398 415129134 415129190 7.040000e-14 89.8
32 TraesCS3D01G195400 chr5B 96.875 32 1 0 5064 5095 521998314 521998345 3.000000e-03 54.7
33 TraesCS3D01G195400 chrUn 92.982 57 2 2 2326 2381 108327578 108327633 1.180000e-11 82.4
34 TraesCS3D01G195400 chr6D 89.394 66 5 2 2336 2400 52335434 52335498 1.180000e-11 82.4
35 TraesCS3D01G195400 chr4A 91.667 60 3 1 2341 2398 141135623 141135564 1.180000e-11 82.4
36 TraesCS3D01G195400 chr4A 100.000 30 0 0 2385 2414 477890229 477890258 7.140000e-04 56.5
37 TraesCS3D01G195400 chr1A 90.000 60 4 2 2323 2381 310856363 310856421 5.480000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G195400 chr3D 189036542 189041648 5106 True 9431.000000 9431 100.000000 1 5107 1 chr3D.!!$R3 5106
1 TraesCS3D01G195400 chr3B 273236070 273242625 6555 True 973.166667 2721 91.808167 93 4535 6 chr3B.!!$R3 4442
2 TraesCS3D01G195400 chr3A 248545307 248549766 4459 False 830.571429 1857 91.416571 48 5107 7 chr3A.!!$F1 5059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 363 0.112412 GGGGAAGAGAAACCAAGCCA 59.888 55.0 0.00 0.0 0.00 4.75 F
646 700 0.536687 CTGGGCTGGCATAGTGATGG 60.537 60.0 2.88 0.0 33.26 3.51 F
1405 1539 0.036732 TGTCATGTTGCCACTCCCTC 59.963 55.0 0.00 0.0 0.00 4.30 F
1406 1540 0.678048 GTCATGTTGCCACTCCCTCC 60.678 60.0 0.00 0.0 0.00 4.30 F
2398 2594 0.257039 TACTGGGACGGAGGGAGTAC 59.743 60.0 0.00 0.0 38.67 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1190 1284 0.612744 AGCAAGCCCAAGAGAGAGAC 59.387 55.0 0.00 0.0 0.00 3.36 R
2379 2575 0.257039 GTACTCCCTCCGTCCCAGTA 59.743 60.0 0.00 0.0 0.00 2.74 R
2381 2577 0.549950 TAGTACTCCCTCCGTCCCAG 59.450 60.0 0.00 0.0 0.00 4.45 R
2797 3004 0.952984 AACAGCTTGCGCTTCTCCTC 60.953 55.0 9.73 0.0 46.47 3.71 R
4368 6795 0.599991 TATGGCGCACGCTCCATAAG 60.600 55.0 16.41 0.0 39.82 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 91 4.985413 TGAACAGAGAAAGCAAAACTGTG 58.015 39.130 0.00 0.00 40.82 3.66
95 97 1.341209 GAAAGCAAAACTGTGGGAGGG 59.659 52.381 0.00 0.00 0.00 4.30
97 99 0.178990 AGCAAAACTGTGGGAGGGTC 60.179 55.000 0.00 0.00 0.00 4.46
99 101 1.609208 CAAAACTGTGGGAGGGTCTG 58.391 55.000 0.00 0.00 0.00 3.51
252 259 8.194104 ACACATCATTTTCAGCTAGACTAGTAG 58.806 37.037 11.15 0.00 0.00 2.57
312 327 2.125673 GTGCGTCGTGTATGCCCT 60.126 61.111 0.00 0.00 39.57 5.19
313 328 1.140161 GTGCGTCGTGTATGCCCTA 59.860 57.895 0.00 0.00 39.57 3.53
317 332 1.669049 CGTCGTGTATGCCCTACCCA 61.669 60.000 0.00 0.00 0.00 4.51
318 333 0.756903 GTCGTGTATGCCCTACCCAT 59.243 55.000 0.00 0.00 0.00 4.00
326 341 0.988145 TGCCCTACCCATCCAAGAGG 60.988 60.000 0.00 0.00 0.00 3.69
339 358 1.705186 CCAAGAGGGGAAGAGAAACCA 59.295 52.381 0.00 0.00 0.00 3.67
340 359 2.108250 CCAAGAGGGGAAGAGAAACCAA 59.892 50.000 0.00 0.00 0.00 3.67
341 360 3.416156 CAAGAGGGGAAGAGAAACCAAG 58.584 50.000 0.00 0.00 0.00 3.61
342 361 1.352687 AGAGGGGAAGAGAAACCAAGC 59.647 52.381 0.00 0.00 0.00 4.01
343 362 0.405973 AGGGGAAGAGAAACCAAGCC 59.594 55.000 0.00 0.00 0.00 4.35
344 363 0.112412 GGGGAAGAGAAACCAAGCCA 59.888 55.000 0.00 0.00 0.00 4.75
393 412 7.492669 TCGCTGAATTAGATACTCCTTTCTTTG 59.507 37.037 0.00 0.00 0.00 2.77
646 700 0.536687 CTGGGCTGGCATAGTGATGG 60.537 60.000 2.88 0.00 33.26 3.51
657 711 2.038863 TAGTGATGGGTGAGTGGGTT 57.961 50.000 0.00 0.00 0.00 4.11
941 1020 2.027653 GTCTCCTCCTTCCTTGGTTCTG 60.028 54.545 0.00 0.00 0.00 3.02
979 1070 2.884012 CACACACAGAGTCAGAGAGAGT 59.116 50.000 0.00 0.00 0.00 3.24
1190 1284 6.090358 GGCATTTCTGTCTTGTTTTGATCATG 59.910 38.462 0.00 0.00 0.00 3.07
1196 1290 6.648310 TCTGTCTTGTTTTGATCATGTCTCTC 59.352 38.462 0.00 0.00 0.00 3.20
1197 1291 6.528321 TGTCTTGTTTTGATCATGTCTCTCT 58.472 36.000 0.00 0.00 0.00 3.10
1198 1292 6.648310 TGTCTTGTTTTGATCATGTCTCTCTC 59.352 38.462 0.00 0.00 0.00 3.20
1199 1293 6.873076 GTCTTGTTTTGATCATGTCTCTCTCT 59.127 38.462 0.00 0.00 0.00 3.10
1201 1295 7.387122 TCTTGTTTTGATCATGTCTCTCTCTTG 59.613 37.037 0.00 0.00 0.00 3.02
1202 1296 5.936372 TGTTTTGATCATGTCTCTCTCTTGG 59.064 40.000 0.00 0.00 0.00 3.61
1246 1366 4.226427 TCCATTTTGCTGCTAGATCAGT 57.774 40.909 0.00 0.00 36.49 3.41
1247 1367 4.592942 TCCATTTTGCTGCTAGATCAGTT 58.407 39.130 0.00 0.00 36.49 3.16
1260 1380 8.092521 TGCTAGATCAGTTTCTTCTTCTTTTG 57.907 34.615 0.00 0.00 0.00 2.44
1316 1436 2.232452 TCAAGAGACTCTAGGTTGCAGC 59.768 50.000 5.14 0.00 0.00 5.25
1371 1491 8.458573 TTGGTGTGTTAATAATCTTGTCTTGT 57.541 30.769 0.00 0.00 0.00 3.16
1380 1514 2.930826 TCTTGTCTTGTGGGGTTCTC 57.069 50.000 0.00 0.00 0.00 2.87
1404 1538 0.478072 TTGTCATGTTGCCACTCCCT 59.522 50.000 0.00 0.00 0.00 4.20
1405 1539 0.036732 TGTCATGTTGCCACTCCCTC 59.963 55.000 0.00 0.00 0.00 4.30
1406 1540 0.678048 GTCATGTTGCCACTCCCTCC 60.678 60.000 0.00 0.00 0.00 4.30
1407 1541 1.379044 CATGTTGCCACTCCCTCCC 60.379 63.158 0.00 0.00 0.00 4.30
1408 1542 1.852157 ATGTTGCCACTCCCTCCCA 60.852 57.895 0.00 0.00 0.00 4.37
1409 1543 2.034221 GTTGCCACTCCCTCCCAC 59.966 66.667 0.00 0.00 0.00 4.61
1410 1544 2.121963 TTGCCACTCCCTCCCACT 60.122 61.111 0.00 0.00 0.00 4.00
1411 1545 2.224159 TTGCCACTCCCTCCCACTC 61.224 63.158 0.00 0.00 0.00 3.51
1412 1546 3.403558 GCCACTCCCTCCCACTCC 61.404 72.222 0.00 0.00 0.00 3.85
1413 1547 2.689034 CCACTCCCTCCCACTCCC 60.689 72.222 0.00 0.00 0.00 4.30
1414 1548 2.122729 CACTCCCTCCCACTCCCA 59.877 66.667 0.00 0.00 0.00 4.37
1415 1549 2.122954 ACTCCCTCCCACTCCCAC 59.877 66.667 0.00 0.00 0.00 4.61
1416 1550 2.452114 CTCCCTCCCACTCCCACT 59.548 66.667 0.00 0.00 0.00 4.00
1417 1551 1.687493 CTCCCTCCCACTCCCACTC 60.687 68.421 0.00 0.00 0.00 3.51
1418 1552 2.689034 CCCTCCCACTCCCACTCC 60.689 72.222 0.00 0.00 0.00 3.85
1419 1553 2.689034 CCTCCCACTCCCACTCCC 60.689 72.222 0.00 0.00 0.00 4.30
1431 1565 0.911525 CCACTCCCAGTCCCAGTGAT 60.912 60.000 0.00 0.00 40.07 3.06
1432 1566 1.622449 CCACTCCCAGTCCCAGTGATA 60.622 57.143 0.00 0.00 40.07 2.15
1433 1567 2.402564 CACTCCCAGTCCCAGTGATAT 58.597 52.381 0.00 0.00 40.07 1.63
1435 1569 3.576118 CACTCCCAGTCCCAGTGATATAG 59.424 52.174 0.00 0.00 40.07 1.31
1436 1570 3.169099 CTCCCAGTCCCAGTGATATAGG 58.831 54.545 0.00 0.00 0.00 2.57
1437 1571 2.795360 TCCCAGTCCCAGTGATATAGGA 59.205 50.000 0.00 0.00 0.00 2.94
1481 1615 1.728971 CCGCAGAGTGAAAAGCAGTAG 59.271 52.381 0.00 0.00 0.00 2.57
1991 2125 1.134670 GGCAACAGGCTCTTCGTCTAT 60.135 52.381 0.00 0.00 44.01 1.98
2084 2218 2.351726 GGTAAGCGTCATGTCATTGTCC 59.648 50.000 0.00 0.00 0.00 4.02
2085 2219 1.078709 AAGCGTCATGTCATTGTCCG 58.921 50.000 0.00 0.00 0.00 4.79
2086 2220 1.060937 GCGTCATGTCATTGTCCGC 59.939 57.895 0.00 0.00 33.55 5.54
2087 2221 1.634757 GCGTCATGTCATTGTCCGCA 61.635 55.000 9.18 0.00 37.70 5.69
2088 2222 1.009078 CGTCATGTCATTGTCCGCAT 58.991 50.000 0.00 0.00 0.00 4.73
2089 2223 1.267682 CGTCATGTCATTGTCCGCATG 60.268 52.381 0.00 0.00 39.81 4.06
2090 2224 1.739466 GTCATGTCATTGTCCGCATGT 59.261 47.619 0.00 0.00 39.54 3.21
2091 2225 2.162208 GTCATGTCATTGTCCGCATGTT 59.838 45.455 0.00 0.00 39.54 2.71
2092 2226 3.373748 GTCATGTCATTGTCCGCATGTTA 59.626 43.478 0.00 0.00 39.54 2.41
2093 2227 3.373748 TCATGTCATTGTCCGCATGTTAC 59.626 43.478 0.00 0.00 39.54 2.50
2094 2228 3.052455 TGTCATTGTCCGCATGTTACT 57.948 42.857 0.00 0.00 0.00 2.24
2095 2229 4.195225 TGTCATTGTCCGCATGTTACTA 57.805 40.909 0.00 0.00 0.00 1.82
2096 2230 4.180817 TGTCATTGTCCGCATGTTACTAG 58.819 43.478 0.00 0.00 0.00 2.57
2097 2231 4.181578 GTCATTGTCCGCATGTTACTAGT 58.818 43.478 0.00 0.00 0.00 2.57
2098 2232 5.105675 TGTCATTGTCCGCATGTTACTAGTA 60.106 40.000 0.00 0.00 0.00 1.82
2099 2233 5.459107 GTCATTGTCCGCATGTTACTAGTAG 59.541 44.000 2.23 0.00 0.00 2.57
2100 2234 5.126545 TCATTGTCCGCATGTTACTAGTAGT 59.873 40.000 8.14 8.14 0.00 2.73
2101 2235 6.319405 TCATTGTCCGCATGTTACTAGTAGTA 59.681 38.462 5.90 5.90 0.00 1.82
2102 2236 5.490139 TGTCCGCATGTTACTAGTAGTAC 57.510 43.478 9.62 6.31 28.93 2.73
2103 2237 5.188434 TGTCCGCATGTTACTAGTAGTACT 58.812 41.667 9.62 8.14 28.93 2.73
2104 2238 5.295292 TGTCCGCATGTTACTAGTAGTACTC 59.705 44.000 9.62 7.05 28.93 2.59
2105 2239 4.509230 TCCGCATGTTACTAGTAGTACTCG 59.491 45.833 9.62 2.87 28.93 4.18
2106 2240 4.272018 CCGCATGTTACTAGTAGTACTCGT 59.728 45.833 9.62 9.40 28.93 4.18
2107 2241 5.463392 CCGCATGTTACTAGTAGTACTCGTA 59.537 44.000 9.62 8.33 28.93 3.43
2108 2242 6.146837 CCGCATGTTACTAGTAGTACTCGTAT 59.853 42.308 13.71 0.50 28.43 3.06
2109 2243 7.008278 CGCATGTTACTAGTAGTACTCGTATG 58.992 42.308 13.71 11.67 28.43 2.39
2110 2244 7.307042 CGCATGTTACTAGTAGTACTCGTATGT 60.307 40.741 13.71 6.74 28.43 2.29
2111 2245 8.341173 GCATGTTACTAGTAGTACTCGTATGTT 58.659 37.037 13.71 1.99 28.43 2.71
2141 2275 9.660180 CTTTTTCTTTTATCTGCCTACTAGAGT 57.340 33.333 0.00 0.00 0.00 3.24
2349 2545 7.800300 AATCATCCTAAATACTACTCCCTCC 57.200 40.000 0.00 0.00 0.00 4.30
2350 2546 5.322754 TCATCCTAAATACTACTCCCTCCG 58.677 45.833 0.00 0.00 0.00 4.63
2351 2547 4.803329 TCCTAAATACTACTCCCTCCGT 57.197 45.455 0.00 0.00 0.00 4.69
2352 2548 5.134725 TCCTAAATACTACTCCCTCCGTT 57.865 43.478 0.00 0.00 0.00 4.44
2353 2549 5.136105 TCCTAAATACTACTCCCTCCGTTC 58.864 45.833 0.00 0.00 0.00 3.95
2354 2550 4.280425 CCTAAATACTACTCCCTCCGTTCC 59.720 50.000 0.00 0.00 0.00 3.62
2355 2551 3.393426 AATACTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
2356 2552 3.614568 ATACTACTCCCTCCGTTCCAT 57.385 47.619 0.00 0.00 0.00 3.41
2357 2553 4.736611 ATACTACTCCCTCCGTTCCATA 57.263 45.455 0.00 0.00 0.00 2.74
2358 2554 3.393426 ACTACTCCCTCCGTTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
2359 2555 3.924922 ACTACTCCCTCCGTTCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
2360 2556 5.070823 ACTACTCCCTCCGTTCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
2361 2557 5.652324 ACTACTCCCTCCGTTCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
2362 2558 6.797707 ACTACTCCCTCCGTTCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
2363 2559 7.243824 ACTACTCCCTCCGTTCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
2364 2560 6.607004 ACTCCCTCCGTTCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
2365 2561 6.320518 ACTCCCTCCGTTCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
2366 2562 6.785963 ACTCCCTCCGTTCCATAATATAAGAA 59.214 38.462 0.00 0.00 0.00 2.52
2367 2563 7.001099 TCCCTCCGTTCCATAATATAAGAAC 57.999 40.000 5.67 5.67 36.19 3.01
2384 2580 5.479716 AAGAACGTTTTTGACACTACTGG 57.520 39.130 0.46 0.00 0.00 4.00
2385 2581 3.875134 AGAACGTTTTTGACACTACTGGG 59.125 43.478 0.46 0.00 0.00 4.45
2386 2582 3.547054 ACGTTTTTGACACTACTGGGA 57.453 42.857 0.00 0.00 0.00 4.37
2387 2583 3.200483 ACGTTTTTGACACTACTGGGAC 58.800 45.455 0.00 0.00 0.00 4.46
2388 2584 2.220133 CGTTTTTGACACTACTGGGACG 59.780 50.000 0.00 0.00 0.00 4.79
2389 2585 2.536761 TTTTGACACTACTGGGACGG 57.463 50.000 0.00 0.00 42.99 4.79
2390 2586 1.707106 TTTGACACTACTGGGACGGA 58.293 50.000 0.00 0.00 38.67 4.69
2391 2587 1.254026 TTGACACTACTGGGACGGAG 58.746 55.000 0.00 0.00 38.67 4.63
2392 2588 0.611062 TGACACTACTGGGACGGAGG 60.611 60.000 0.00 0.00 38.67 4.30
2393 2589 1.305046 ACACTACTGGGACGGAGGG 60.305 63.158 0.00 0.00 38.67 4.30
2394 2590 1.000019 CACTACTGGGACGGAGGGA 60.000 63.158 0.00 0.00 38.67 4.20
2395 2591 1.038130 CACTACTGGGACGGAGGGAG 61.038 65.000 0.00 0.00 38.67 4.30
2396 2592 1.306970 CTACTGGGACGGAGGGAGT 59.693 63.158 0.00 0.00 38.67 3.85
2397 2593 0.549950 CTACTGGGACGGAGGGAGTA 59.450 60.000 0.00 0.00 38.67 2.59
2398 2594 0.257039 TACTGGGACGGAGGGAGTAC 59.743 60.000 0.00 0.00 38.67 2.73
2399 2595 1.306970 CTGGGACGGAGGGAGTACT 59.693 63.158 0.00 0.00 36.31 2.73
2400 2596 0.549950 CTGGGACGGAGGGAGTACTA 59.450 60.000 0.00 0.00 36.31 1.82
2401 2597 1.002069 TGGGACGGAGGGAGTACTAA 58.998 55.000 0.00 0.00 0.00 2.24
2402 2598 1.358787 TGGGACGGAGGGAGTACTAAA 59.641 52.381 0.00 0.00 0.00 1.85
2611 2815 6.064060 TGCAATCTATGGAGGGTAATCTTTG 58.936 40.000 0.00 0.00 0.00 2.77
2676 2883 6.172630 ACCAATTTGGCATACCTTGAAATTC 58.827 36.000 15.49 0.00 42.67 2.17
2736 2943 1.936547 CTCGTTCTGCAATTAGGCTCC 59.063 52.381 0.00 0.00 34.04 4.70
2797 3004 1.679139 TTTGAGCAACCACTGGAGTG 58.321 50.000 0.71 0.00 45.23 3.51
3107 3681 4.641989 TCCGTGGTCTAGGTAAGTGAATAC 59.358 45.833 0.00 0.00 0.00 1.89
3165 3743 8.012241 GTCAAGTCTTGCATTTATCGATAATCC 58.988 37.037 18.18 10.14 0.00 3.01
3401 3988 0.669625 CCAACGGTTCTCGAAGGACC 60.670 60.000 0.00 3.03 42.43 4.46
3443 4030 2.359850 TTTCTCCGCGGCATTGCT 60.360 55.556 23.51 0.00 0.00 3.91
3525 4112 0.462047 CGGTCCACCTCTTGTATGCC 60.462 60.000 0.00 0.00 0.00 4.40
3526 4113 0.912486 GGTCCACCTCTTGTATGCCT 59.088 55.000 0.00 0.00 0.00 4.75
3555 4142 2.234908 CCTTCCACAACACTAGCTAGCT 59.765 50.000 23.12 23.12 0.00 3.32
3556 4143 3.447586 CCTTCCACAACACTAGCTAGCTA 59.552 47.826 22.85 22.85 0.00 3.32
3569 4156 6.057321 CTAGCTAGCTAGTACTCCCTATGT 57.943 45.833 34.41 5.51 40.68 2.29
3570 4157 7.185318 CTAGCTAGCTAGTACTCCCTATGTA 57.815 44.000 34.41 7.90 40.68 2.29
3571 4158 6.451292 AGCTAGCTAGTACTCCCTATGTAA 57.549 41.667 17.69 0.00 0.00 2.41
3572 4159 6.850234 AGCTAGCTAGTACTCCCTATGTAAA 58.150 40.000 17.69 0.00 0.00 2.01
3573 4160 6.943718 AGCTAGCTAGTACTCCCTATGTAAAG 59.056 42.308 17.69 0.00 0.00 1.85
3574 4161 6.941436 GCTAGCTAGTACTCCCTATGTAAAGA 59.059 42.308 21.62 0.00 0.00 2.52
3575 4162 7.447853 GCTAGCTAGTACTCCCTATGTAAAGAA 59.552 40.741 21.62 0.00 0.00 2.52
3576 4163 9.352191 CTAGCTAGTACTCCCTATGTAAAGAAA 57.648 37.037 12.92 0.00 0.00 2.52
3577 4164 8.785184 AGCTAGTACTCCCTATGTAAAGAAAT 57.215 34.615 0.00 0.00 0.00 2.17
3578 4165 9.878737 AGCTAGTACTCCCTATGTAAAGAAATA 57.121 33.333 0.00 0.00 0.00 1.40
3615 4202 1.909986 ACAGAGGGAGGGAGTTTTAGC 59.090 52.381 0.00 0.00 0.00 3.09
3769 4368 1.476891 CTGTTCGCTCCTGTAAGCCTA 59.523 52.381 0.00 0.00 39.17 3.93
3770 4369 2.101582 CTGTTCGCTCCTGTAAGCCTAT 59.898 50.000 0.00 0.00 39.17 2.57
3771 4370 2.100916 TGTTCGCTCCTGTAAGCCTATC 59.899 50.000 0.00 0.00 39.17 2.08
3772 4371 1.329256 TCGCTCCTGTAAGCCTATCC 58.671 55.000 0.00 0.00 39.17 2.59
3773 4372 1.040646 CGCTCCTGTAAGCCTATCCA 58.959 55.000 0.00 0.00 39.17 3.41
3774 4373 1.620819 CGCTCCTGTAAGCCTATCCAT 59.379 52.381 0.00 0.00 39.17 3.41
3775 4374 2.353208 CGCTCCTGTAAGCCTATCCATC 60.353 54.545 0.00 0.00 39.17 3.51
3776 4375 2.027653 GCTCCTGTAAGCCTATCCATCC 60.028 54.545 0.00 0.00 36.22 3.51
3813 4412 7.094975 CCATCTGGAACTAATCACAAACGTAAA 60.095 37.037 0.00 0.00 37.39 2.01
3814 4413 7.972832 TCTGGAACTAATCACAAACGTAAAT 57.027 32.000 0.00 0.00 0.00 1.40
3815 4414 8.385898 TCTGGAACTAATCACAAACGTAAATT 57.614 30.769 0.00 0.00 0.00 1.82
3843 4442 5.051153 GCTACTCCTACAAGTTATTGAGGC 58.949 45.833 0.00 0.00 38.83 4.70
3881 4485 0.178903 AGGGACCTGGAGTAACAGCA 60.179 55.000 0.00 0.00 37.16 4.41
4176 4795 6.845302 TGCTGAACTTGCTCTGTAAAATATG 58.155 36.000 0.00 0.00 0.00 1.78
4205 4826 4.790765 AGTTGAGCAAAATAAGCCTTCC 57.209 40.909 0.00 0.00 0.00 3.46
4211 4832 3.511540 AGCAAAATAAGCCTTCCTGGTTC 59.488 43.478 0.00 0.00 38.35 3.62
4227 4848 2.194271 GGTTCTAGGATTTCTGCGACG 58.806 52.381 0.00 0.00 0.00 5.12
4241 4863 2.230940 CGACGGCGGCTCTTATGTG 61.231 63.158 12.58 0.00 0.00 3.21
4323 4952 3.631686 TCAATACGGATGATTTTGGCTGG 59.368 43.478 0.00 0.00 0.00 4.85
4329 4958 2.417243 GGATGATTTTGGCTGGAAACCG 60.417 50.000 0.00 0.00 0.00 4.44
4353 4984 2.143594 AACAGAGTCGTCGTCCAGCC 62.144 60.000 0.00 0.00 0.00 4.85
4368 6795 4.773209 GCCCTCGGCCTGTATAAC 57.227 61.111 0.00 0.00 44.06 1.89
4391 6818 2.029666 GAGCGTGCGCCATATCCT 59.970 61.111 13.21 0.00 43.17 3.24
4437 6871 1.139058 CTGGGGGAGTGAACTATTCGG 59.861 57.143 0.00 0.00 0.00 4.30
4439 6873 1.492764 GGGGAGTGAACTATTCGGGA 58.507 55.000 0.00 0.00 0.00 5.14
4470 6924 2.838813 AGGGAAGTTTCAGGTAGCCTAC 59.161 50.000 0.00 0.00 29.64 3.18
4518 6972 1.613437 CCACTTTCGCCCTTGTCAATT 59.387 47.619 0.00 0.00 0.00 2.32
4528 6982 2.421424 CCCTTGTCAATTCAGTAGCTGC 59.579 50.000 0.00 0.00 0.00 5.25
4529 6983 3.076621 CCTTGTCAATTCAGTAGCTGCA 58.923 45.455 4.12 0.00 0.00 4.41
4530 6984 3.693085 CCTTGTCAATTCAGTAGCTGCAT 59.307 43.478 4.12 0.00 0.00 3.96
4531 6985 4.877823 CCTTGTCAATTCAGTAGCTGCATA 59.122 41.667 4.12 0.00 0.00 3.14
4532 6986 5.530171 CCTTGTCAATTCAGTAGCTGCATAT 59.470 40.000 4.12 0.00 0.00 1.78
4533 6987 6.293298 CCTTGTCAATTCAGTAGCTGCATATC 60.293 42.308 4.12 0.00 0.00 1.63
4534 6988 5.059161 TGTCAATTCAGTAGCTGCATATCC 58.941 41.667 4.12 0.00 0.00 2.59
4535 6989 4.151335 GTCAATTCAGTAGCTGCATATCCG 59.849 45.833 4.12 0.00 0.00 4.18
4536 6990 2.820059 TTCAGTAGCTGCATATCCGG 57.180 50.000 4.12 0.00 0.00 5.14
4537 6991 0.969149 TCAGTAGCTGCATATCCGGG 59.031 55.000 0.00 0.00 0.00 5.73
4538 6992 0.969149 CAGTAGCTGCATATCCGGGA 59.031 55.000 0.00 0.00 0.00 5.14
4539 6993 1.344438 CAGTAGCTGCATATCCGGGAA 59.656 52.381 0.00 0.00 0.00 3.97
4540 6994 2.047061 AGTAGCTGCATATCCGGGAAA 58.953 47.619 0.00 0.00 0.00 3.13
4541 6995 2.438021 AGTAGCTGCATATCCGGGAAAA 59.562 45.455 0.00 0.00 0.00 2.29
4542 6996 2.664402 AGCTGCATATCCGGGAAAAT 57.336 45.000 0.00 0.00 0.00 1.82
4543 6997 3.788227 AGCTGCATATCCGGGAAAATA 57.212 42.857 0.00 0.00 0.00 1.40
4544 6998 4.307032 AGCTGCATATCCGGGAAAATAT 57.693 40.909 0.00 0.00 0.00 1.28
4545 6999 4.265073 AGCTGCATATCCGGGAAAATATC 58.735 43.478 0.00 0.00 0.00 1.63
4546 7000 4.018960 AGCTGCATATCCGGGAAAATATCT 60.019 41.667 0.00 0.00 0.00 1.98
4547 7001 4.095483 GCTGCATATCCGGGAAAATATCTG 59.905 45.833 0.00 0.00 0.00 2.90
4548 7002 4.588899 TGCATATCCGGGAAAATATCTGG 58.411 43.478 0.00 0.00 0.00 3.86
4549 7003 4.042809 TGCATATCCGGGAAAATATCTGGT 59.957 41.667 0.00 0.00 0.00 4.00
4550 7004 5.249622 TGCATATCCGGGAAAATATCTGGTA 59.750 40.000 0.00 0.00 0.00 3.25
4551 7005 5.585047 GCATATCCGGGAAAATATCTGGTAC 59.415 44.000 0.00 0.00 0.00 3.34
4552 7006 6.576442 GCATATCCGGGAAAATATCTGGTACT 60.576 42.308 0.00 0.00 0.00 2.73
4553 7007 4.950205 TCCGGGAAAATATCTGGTACTC 57.050 45.455 0.00 0.00 0.00 2.59
4554 7008 4.553678 TCCGGGAAAATATCTGGTACTCT 58.446 43.478 0.00 0.00 0.00 3.24
4555 7009 4.587684 TCCGGGAAAATATCTGGTACTCTC 59.412 45.833 0.00 0.00 0.00 3.20
4556 7010 4.344102 CCGGGAAAATATCTGGTACTCTCA 59.656 45.833 0.00 0.00 0.00 3.27
4557 7011 5.012148 CCGGGAAAATATCTGGTACTCTCAT 59.988 44.000 0.00 0.00 0.00 2.90
4558 7012 6.159988 CGGGAAAATATCTGGTACTCTCATC 58.840 44.000 0.00 0.00 0.00 2.92
4559 7013 6.468543 GGGAAAATATCTGGTACTCTCATCC 58.531 44.000 0.00 0.00 0.00 3.51
4560 7014 6.271159 GGGAAAATATCTGGTACTCTCATCCT 59.729 42.308 0.00 0.00 0.00 3.24
4561 7015 7.202139 GGGAAAATATCTGGTACTCTCATCCTT 60.202 40.741 0.00 0.00 0.00 3.36
4562 7016 7.659390 GGAAAATATCTGGTACTCTCATCCTTG 59.341 40.741 0.00 0.00 0.00 3.61
4563 7017 6.678568 AATATCTGGTACTCTCATCCTTGG 57.321 41.667 0.00 0.00 0.00 3.61
4564 7018 2.752030 TCTGGTACTCTCATCCTTGGG 58.248 52.381 0.00 0.00 0.00 4.12
4565 7019 1.139853 CTGGTACTCTCATCCTTGGGC 59.860 57.143 0.00 0.00 0.00 5.36
4566 7020 0.470341 GGTACTCTCATCCTTGGGCC 59.530 60.000 0.00 0.00 0.00 5.80
4567 7021 0.470341 GTACTCTCATCCTTGGGCCC 59.530 60.000 17.59 17.59 0.00 5.80
4568 7022 1.048724 TACTCTCATCCTTGGGCCCG 61.049 60.000 19.37 2.86 0.00 6.13
4569 7023 3.089874 TCTCATCCTTGGGCCCGG 61.090 66.667 19.37 14.00 0.00 5.73
4570 7024 3.411517 CTCATCCTTGGGCCCGGT 61.412 66.667 19.37 0.00 0.00 5.28
4571 7025 3.704231 CTCATCCTTGGGCCCGGTG 62.704 68.421 19.37 9.96 0.00 4.94
4576 7030 4.659172 CTTGGGCCCGGTGCTTCA 62.659 66.667 19.37 9.98 40.92 3.02
4577 7031 4.211330 TTGGGCCCGGTGCTTCAA 62.211 61.111 19.37 14.18 40.92 2.69
4578 7032 4.659172 TGGGCCCGGTGCTTCAAG 62.659 66.667 19.37 0.00 40.92 3.02
4579 7033 4.660938 GGGCCCGGTGCTTCAAGT 62.661 66.667 5.69 0.00 40.92 3.16
4580 7034 2.597510 GGCCCGGTGCTTCAAGTT 60.598 61.111 13.58 0.00 40.92 2.66
4581 7035 2.626780 GGCCCGGTGCTTCAAGTTC 61.627 63.158 13.58 0.00 40.92 3.01
4582 7036 1.896660 GCCCGGTGCTTCAAGTTCA 60.897 57.895 0.00 0.00 36.87 3.18
4583 7037 1.452145 GCCCGGTGCTTCAAGTTCAA 61.452 55.000 0.00 0.00 36.87 2.69
4584 7038 1.028905 CCCGGTGCTTCAAGTTCAAA 58.971 50.000 0.00 0.00 0.00 2.69
4585 7039 1.407258 CCCGGTGCTTCAAGTTCAAAA 59.593 47.619 0.00 0.00 0.00 2.44
4586 7040 2.159170 CCCGGTGCTTCAAGTTCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
4587 7041 2.857748 CCGGTGCTTCAAGTTCAAAAAC 59.142 45.455 0.00 0.00 35.50 2.43
4588 7042 3.506810 CGGTGCTTCAAGTTCAAAAACA 58.493 40.909 0.00 0.00 37.88 2.83
4589 7043 3.923461 CGGTGCTTCAAGTTCAAAAACAA 59.077 39.130 0.00 0.00 37.88 2.83
4590 7044 4.387256 CGGTGCTTCAAGTTCAAAAACAAA 59.613 37.500 0.00 0.00 37.88 2.83
4591 7045 5.063312 CGGTGCTTCAAGTTCAAAAACAAAT 59.937 36.000 0.00 0.00 37.88 2.32
4592 7046 6.402011 CGGTGCTTCAAGTTCAAAAACAAATT 60.402 34.615 0.00 0.00 37.88 1.82
4593 7047 7.304735 GGTGCTTCAAGTTCAAAAACAAATTT 58.695 30.769 0.00 0.00 37.88 1.82
4594 7048 7.807433 GGTGCTTCAAGTTCAAAAACAAATTTT 59.193 29.630 0.00 0.00 41.93 1.82
4595 7049 9.818796 GTGCTTCAAGTTCAAAAACAAATTTTA 57.181 25.926 0.00 0.00 39.20 1.52
4643 7097 8.831715 AAAAGATAAATTTTCGCAAGGAATGT 57.168 26.923 0.00 0.00 32.58 2.71
4644 7098 7.816945 AAGATAAATTTTCGCAAGGAATGTG 57.183 32.000 0.00 0.00 41.04 3.21
4645 7099 7.156876 AGATAAATTTTCGCAAGGAATGTGA 57.843 32.000 0.00 0.00 46.52 3.58
4651 7105 3.394674 TCGCAAGGAATGTGACTACAA 57.605 42.857 0.00 0.00 43.46 2.41
4652 7106 3.064207 TCGCAAGGAATGTGACTACAAC 58.936 45.455 0.00 0.00 43.46 3.32
4653 7107 2.159627 CGCAAGGAATGTGACTACAACC 59.840 50.000 0.00 0.00 42.32 3.77
4654 7108 2.488153 GCAAGGAATGTGACTACAACCC 59.512 50.000 0.00 0.00 40.84 4.11
4655 7109 3.750371 CAAGGAATGTGACTACAACCCA 58.250 45.455 0.00 0.00 40.84 4.51
4656 7110 4.335416 CAAGGAATGTGACTACAACCCAT 58.665 43.478 0.00 0.00 40.84 4.00
4657 7111 5.496556 CAAGGAATGTGACTACAACCCATA 58.503 41.667 0.00 0.00 40.84 2.74
4658 7112 5.359194 AGGAATGTGACTACAACCCATAG 57.641 43.478 0.00 0.00 40.84 2.23
4659 7113 5.030147 AGGAATGTGACTACAACCCATAGA 58.970 41.667 0.00 0.00 40.84 1.98
4660 7114 5.487488 AGGAATGTGACTACAACCCATAGAA 59.513 40.000 0.00 0.00 40.84 2.10
4661 7115 6.012858 AGGAATGTGACTACAACCCATAGAAA 60.013 38.462 0.00 0.00 40.84 2.52
4662 7116 6.828785 GGAATGTGACTACAACCCATAGAAAT 59.171 38.462 0.00 0.00 40.84 2.17
4663 7117 7.339466 GGAATGTGACTACAACCCATAGAAATT 59.661 37.037 0.00 0.00 40.84 1.82
4664 7118 8.650143 AATGTGACTACAACCCATAGAAATTT 57.350 30.769 0.00 0.00 40.84 1.82
4665 7119 7.681939 TGTGACTACAACCCATAGAAATTTC 57.318 36.000 10.33 10.33 32.88 2.17
4666 7120 7.227873 TGTGACTACAACCCATAGAAATTTCA 58.772 34.615 19.99 6.84 32.88 2.69
4667 7121 7.390440 TGTGACTACAACCCATAGAAATTTCAG 59.610 37.037 19.99 9.21 32.88 3.02
4668 7122 6.884295 TGACTACAACCCATAGAAATTTCAGG 59.116 38.462 19.99 16.64 0.00 3.86
4669 7123 6.790319 ACTACAACCCATAGAAATTTCAGGT 58.210 36.000 19.99 16.22 0.00 4.00
4670 7124 6.884836 ACTACAACCCATAGAAATTTCAGGTC 59.115 38.462 19.99 0.00 0.00 3.85
4671 7125 5.016831 ACAACCCATAGAAATTTCAGGTCC 58.983 41.667 19.99 0.00 0.00 4.46
4672 7126 4.946160 ACCCATAGAAATTTCAGGTCCA 57.054 40.909 19.99 0.00 0.00 4.02
4673 7127 5.269554 ACCCATAGAAATTTCAGGTCCAA 57.730 39.130 19.99 0.00 0.00 3.53
4674 7128 5.650283 ACCCATAGAAATTTCAGGTCCAAA 58.350 37.500 19.99 0.00 0.00 3.28
4675 7129 5.480422 ACCCATAGAAATTTCAGGTCCAAAC 59.520 40.000 19.99 0.00 0.00 2.93
4676 7130 5.716703 CCCATAGAAATTTCAGGTCCAAACT 59.283 40.000 19.99 0.00 0.00 2.66
4677 7131 6.127619 CCCATAGAAATTTCAGGTCCAAACTC 60.128 42.308 19.99 0.00 0.00 3.01
4678 7132 6.403636 CCATAGAAATTTCAGGTCCAAACTCG 60.404 42.308 19.99 0.00 0.00 4.18
4679 7133 4.714632 AGAAATTTCAGGTCCAAACTCGA 58.285 39.130 19.99 0.00 0.00 4.04
4680 7134 5.130350 AGAAATTTCAGGTCCAAACTCGAA 58.870 37.500 19.99 0.00 0.00 3.71
4681 7135 5.592688 AGAAATTTCAGGTCCAAACTCGAAA 59.407 36.000 19.99 0.00 33.30 3.46
4682 7136 6.265422 AGAAATTTCAGGTCCAAACTCGAAAT 59.735 34.615 19.99 0.00 37.59 2.17
4683 7137 4.829064 TTTCAGGTCCAAACTCGAAATG 57.171 40.909 0.00 0.00 0.00 2.32
4684 7138 3.485463 TCAGGTCCAAACTCGAAATGT 57.515 42.857 0.00 0.00 0.00 2.71
4685 7139 4.610605 TCAGGTCCAAACTCGAAATGTA 57.389 40.909 0.00 0.00 0.00 2.29
4686 7140 4.312443 TCAGGTCCAAACTCGAAATGTAC 58.688 43.478 0.00 0.00 0.00 2.90
4687 7141 4.062293 CAGGTCCAAACTCGAAATGTACA 58.938 43.478 0.00 0.00 0.00 2.90
4688 7142 4.695455 CAGGTCCAAACTCGAAATGTACAT 59.305 41.667 1.41 1.41 0.00 2.29
4689 7143 5.181245 CAGGTCCAAACTCGAAATGTACATT 59.819 40.000 15.47 15.47 0.00 2.71
4690 7144 5.181245 AGGTCCAAACTCGAAATGTACATTG 59.819 40.000 21.46 11.40 0.00 2.82
4691 7145 5.180492 GGTCCAAACTCGAAATGTACATTGA 59.820 40.000 21.46 13.93 0.00 2.57
4692 7146 6.307155 GTCCAAACTCGAAATGTACATTGAG 58.693 40.000 24.14 24.14 31.15 3.02
4693 7147 6.147164 GTCCAAACTCGAAATGTACATTGAGA 59.853 38.462 29.07 24.14 30.12 3.27
4694 7148 6.708502 TCCAAACTCGAAATGTACATTGAGAA 59.291 34.615 29.07 14.32 30.12 2.87
4695 7149 7.227711 TCCAAACTCGAAATGTACATTGAGAAA 59.772 33.333 29.07 13.00 30.12 2.52
4696 7150 7.323656 CCAAACTCGAAATGTACATTGAGAAAC 59.676 37.037 29.07 14.76 30.12 2.78
4697 7151 7.490962 AACTCGAAATGTACATTGAGAAACA 57.509 32.000 29.07 10.65 30.12 2.83
4698 7152 7.490962 ACTCGAAATGTACATTGAGAAACAA 57.509 32.000 29.07 10.39 42.95 2.83
4699 7153 7.925993 ACTCGAAATGTACATTGAGAAACAAA 58.074 30.769 29.07 9.88 42.03 2.83
4700 7154 8.402472 ACTCGAAATGTACATTGAGAAACAAAA 58.598 29.630 29.07 9.38 42.03 2.44
4701 7155 9.232082 CTCGAAATGTACATTGAGAAACAAAAA 57.768 29.630 21.46 0.81 42.03 1.94
4702 7156 9.743057 TCGAAATGTACATTGAGAAACAAAAAT 57.257 25.926 21.46 1.15 42.03 1.82
4726 7180 8.859236 ATATGAAATCCAGATGTGAATAGTGG 57.141 34.615 0.00 0.00 0.00 4.00
4727 7181 4.883585 TGAAATCCAGATGTGAATAGTGGC 59.116 41.667 0.00 0.00 0.00 5.01
4728 7182 4.785346 AATCCAGATGTGAATAGTGGCT 57.215 40.909 0.00 0.00 0.00 4.75
4729 7183 5.894298 AATCCAGATGTGAATAGTGGCTA 57.106 39.130 0.00 0.00 0.00 3.93
4730 7184 6.445451 AATCCAGATGTGAATAGTGGCTAT 57.555 37.500 0.00 0.00 0.00 2.97
4731 7185 5.894298 TCCAGATGTGAATAGTGGCTATT 57.106 39.130 1.48 1.48 39.09 1.73
4732 7186 6.252599 TCCAGATGTGAATAGTGGCTATTT 57.747 37.500 3.32 0.00 36.87 1.40
4733 7187 6.662755 TCCAGATGTGAATAGTGGCTATTTT 58.337 36.000 3.32 0.00 36.87 1.82
4734 7188 6.543465 TCCAGATGTGAATAGTGGCTATTTTG 59.457 38.462 3.32 0.00 36.87 2.44
4735 7189 6.543465 CCAGATGTGAATAGTGGCTATTTTGA 59.457 38.462 3.32 0.00 36.87 2.69
4736 7190 7.230108 CCAGATGTGAATAGTGGCTATTTTGAT 59.770 37.037 3.32 0.00 36.87 2.57
4737 7191 8.288208 CAGATGTGAATAGTGGCTATTTTGATC 58.712 37.037 3.32 0.00 36.87 2.92
4738 7192 8.216423 AGATGTGAATAGTGGCTATTTTGATCT 58.784 33.333 3.32 7.04 36.87 2.75
4739 7193 8.757982 ATGTGAATAGTGGCTATTTTGATCTT 57.242 30.769 3.32 0.00 36.87 2.40
4740 7194 8.579850 TGTGAATAGTGGCTATTTTGATCTTT 57.420 30.769 3.32 0.00 36.87 2.52
4741 7195 8.461222 TGTGAATAGTGGCTATTTTGATCTTTG 58.539 33.333 3.32 0.00 36.87 2.77
4742 7196 8.462016 GTGAATAGTGGCTATTTTGATCTTTGT 58.538 33.333 3.32 0.00 36.87 2.83
4743 7197 8.677300 TGAATAGTGGCTATTTTGATCTTTGTC 58.323 33.333 3.32 0.00 36.87 3.18
4744 7198 8.814038 AATAGTGGCTATTTTGATCTTTGTCT 57.186 30.769 0.00 0.00 33.44 3.41
4745 7199 8.814038 ATAGTGGCTATTTTGATCTTTGTCTT 57.186 30.769 0.00 0.00 0.00 3.01
4746 7200 7.530426 AGTGGCTATTTTGATCTTTGTCTTT 57.470 32.000 0.00 0.00 0.00 2.52
4747 7201 7.955918 AGTGGCTATTTTGATCTTTGTCTTTT 58.044 30.769 0.00 0.00 0.00 2.27
4748 7202 8.424133 AGTGGCTATTTTGATCTTTGTCTTTTT 58.576 29.630 0.00 0.00 0.00 1.94
4770 7224 6.647334 TTTTACACTTCATGCCAGATTTCA 57.353 33.333 0.00 0.00 0.00 2.69
4771 7225 6.839124 TTTACACTTCATGCCAGATTTCAT 57.161 33.333 0.00 0.00 0.00 2.57
4772 7226 7.936496 TTTACACTTCATGCCAGATTTCATA 57.064 32.000 0.00 0.00 0.00 2.15
4773 7227 8.523915 TTTACACTTCATGCCAGATTTCATAT 57.476 30.769 0.00 0.00 0.00 1.78
4774 7228 8.523915 TTACACTTCATGCCAGATTTCATATT 57.476 30.769 0.00 0.00 0.00 1.28
4775 7229 7.414222 ACACTTCATGCCAGATTTCATATTT 57.586 32.000 0.00 0.00 0.00 1.40
4776 7230 7.844009 ACACTTCATGCCAGATTTCATATTTT 58.156 30.769 0.00 0.00 0.00 1.82
4777 7231 8.316214 ACACTTCATGCCAGATTTCATATTTTT 58.684 29.630 0.00 0.00 0.00 1.94
4778 7232 9.806203 CACTTCATGCCAGATTTCATATTTTTA 57.194 29.630 0.00 0.00 0.00 1.52
4804 7258 7.712264 TTCTTAATGTGCATTTCAAGTTTGG 57.288 32.000 2.56 0.00 32.50 3.28
4805 7259 7.048629 TCTTAATGTGCATTTCAAGTTTGGA 57.951 32.000 2.56 0.00 32.50 3.53
4806 7260 6.922957 TCTTAATGTGCATTTCAAGTTTGGAC 59.077 34.615 2.56 0.00 32.50 4.02
4807 7261 3.451141 TGTGCATTTCAAGTTTGGACC 57.549 42.857 0.00 0.00 31.50 4.46
4808 7262 3.030291 TGTGCATTTCAAGTTTGGACCT 58.970 40.909 0.00 0.00 31.50 3.85
4809 7263 3.450457 TGTGCATTTCAAGTTTGGACCTT 59.550 39.130 0.00 0.00 31.50 3.50
4810 7264 4.646945 TGTGCATTTCAAGTTTGGACCTTA 59.353 37.500 0.00 0.00 31.50 2.69
4811 7265 5.127845 TGTGCATTTCAAGTTTGGACCTTAA 59.872 36.000 0.00 0.00 31.50 1.85
4812 7266 6.045955 GTGCATTTCAAGTTTGGACCTTAAA 58.954 36.000 0.00 0.00 0.00 1.52
4813 7267 6.705825 GTGCATTTCAAGTTTGGACCTTAAAT 59.294 34.615 0.00 0.00 0.00 1.40
4814 7268 7.226523 GTGCATTTCAAGTTTGGACCTTAAATT 59.773 33.333 0.00 0.00 0.00 1.82
4815 7269 7.772757 TGCATTTCAAGTTTGGACCTTAAATTT 59.227 29.630 0.00 0.00 0.00 1.82
4816 7270 8.620416 GCATTTCAAGTTTGGACCTTAAATTTT 58.380 29.630 0.00 0.00 0.00 1.82
4820 7274 9.825109 TTCAAGTTTGGACCTTAAATTTTTAGG 57.175 29.630 11.67 11.67 0.00 2.69
4821 7275 8.425703 TCAAGTTTGGACCTTAAATTTTTAGGG 58.574 33.333 16.34 10.65 43.35 3.53
4822 7276 7.311092 AGTTTGGACCTTAAATTTTTAGGGG 57.689 36.000 16.34 8.56 42.37 4.79
4823 7277 6.847567 AGTTTGGACCTTAAATTTTTAGGGGT 59.152 34.615 16.34 10.97 42.37 4.95
4824 7278 7.348801 AGTTTGGACCTTAAATTTTTAGGGGTT 59.651 33.333 16.34 0.00 42.37 4.11
4825 7279 6.673839 TGGACCTTAAATTTTTAGGGGTTG 57.326 37.500 16.34 0.00 42.37 3.77
4826 7280 6.144625 TGGACCTTAAATTTTTAGGGGTTGT 58.855 36.000 16.34 0.00 42.37 3.32
4827 7281 7.303713 TGGACCTTAAATTTTTAGGGGTTGTA 58.696 34.615 16.34 0.00 42.37 2.41
4828 7282 7.452189 TGGACCTTAAATTTTTAGGGGTTGTAG 59.548 37.037 16.34 0.00 42.37 2.74
4829 7283 7.452501 GGACCTTAAATTTTTAGGGGTTGTAGT 59.547 37.037 16.34 0.00 42.37 2.73
4830 7284 8.786710 ACCTTAAATTTTTAGGGGTTGTAGTT 57.213 30.769 16.34 0.00 42.37 2.24
4831 7285 9.880254 ACCTTAAATTTTTAGGGGTTGTAGTTA 57.120 29.630 16.34 0.00 42.37 2.24
4837 7291 7.764141 TTTTTAGGGGTTGTAGTTACATTCC 57.236 36.000 0.00 0.30 35.89 3.01
4838 7292 6.707273 TTTAGGGGTTGTAGTTACATTCCT 57.293 37.500 10.94 10.94 35.89 3.36
4839 7293 6.707273 TTAGGGGTTGTAGTTACATTCCTT 57.293 37.500 11.24 7.24 35.89 3.36
4840 7294 5.594199 AGGGGTTGTAGTTACATTCCTTT 57.406 39.130 11.18 2.27 35.89 3.11
4841 7295 5.960704 AGGGGTTGTAGTTACATTCCTTTT 58.039 37.500 11.18 0.68 35.89 2.27
4842 7296 5.773176 AGGGGTTGTAGTTACATTCCTTTTG 59.227 40.000 11.18 0.00 35.89 2.44
4843 7297 5.771165 GGGGTTGTAGTTACATTCCTTTTGA 59.229 40.000 11.18 0.00 35.89 2.69
4844 7298 6.265876 GGGGTTGTAGTTACATTCCTTTTGAA 59.734 38.462 11.18 0.00 35.89 2.69
4845 7299 7.143340 GGGTTGTAGTTACATTCCTTTTGAAC 58.857 38.462 11.18 0.00 35.31 3.18
4846 7300 7.201839 GGGTTGTAGTTACATTCCTTTTGAACA 60.202 37.037 11.18 0.00 35.31 3.18
4847 7301 8.357402 GGTTGTAGTTACATTCCTTTTGAACAT 58.643 33.333 0.00 0.00 35.31 2.71
4848 7302 9.744468 GTTGTAGTTACATTCCTTTTGAACATT 57.256 29.630 0.00 0.00 35.31 2.71
4849 7303 9.959749 TTGTAGTTACATTCCTTTTGAACATTC 57.040 29.630 0.00 0.00 35.31 2.67
4850 7304 9.126151 TGTAGTTACATTCCTTTTGAACATTCA 57.874 29.630 0.00 0.00 35.31 2.57
4851 7305 9.394477 GTAGTTACATTCCTTTTGAACATTCAC 57.606 33.333 0.00 0.00 36.83 3.18
4852 7306 8.006298 AGTTACATTCCTTTTGAACATTCACA 57.994 30.769 0.00 0.00 36.83 3.58
4853 7307 8.641541 AGTTACATTCCTTTTGAACATTCACAT 58.358 29.630 0.00 0.00 36.83 3.21
4854 7308 9.260002 GTTACATTCCTTTTGAACATTCACATT 57.740 29.630 0.00 0.00 36.83 2.71
4855 7309 9.829507 TTACATTCCTTTTGAACATTCACATTT 57.170 25.926 0.00 0.00 36.83 2.32
4856 7310 8.735692 ACATTCCTTTTGAACATTCACATTTT 57.264 26.923 0.00 0.00 36.83 1.82
4857 7311 9.176460 ACATTCCTTTTGAACATTCACATTTTT 57.824 25.926 0.00 0.00 36.83 1.94
4909 7363 1.981256 TTTCTTGACTTGGAGCACCC 58.019 50.000 0.00 0.00 34.81 4.61
4910 7364 0.250295 TTCTTGACTTGGAGCACCCG 60.250 55.000 0.00 0.00 37.93 5.28
4911 7365 1.672356 CTTGACTTGGAGCACCCGG 60.672 63.158 0.00 0.00 37.93 5.73
4912 7366 2.111999 CTTGACTTGGAGCACCCGGA 62.112 60.000 0.73 0.00 37.93 5.14
4913 7367 2.111999 TTGACTTGGAGCACCCGGAG 62.112 60.000 0.73 0.00 37.93 4.63
4914 7368 2.526873 ACTTGGAGCACCCGGAGT 60.527 61.111 0.73 0.00 37.93 3.85
4915 7369 1.229082 ACTTGGAGCACCCGGAGTA 60.229 57.895 0.73 0.00 37.93 2.59
4916 7370 1.218316 CTTGGAGCACCCGGAGTAC 59.782 63.158 0.73 0.00 37.93 2.73
4917 7371 2.240162 CTTGGAGCACCCGGAGTACC 62.240 65.000 0.73 4.79 37.93 3.34
4918 7372 3.468140 GGAGCACCCGGAGTACCC 61.468 72.222 0.73 0.00 0.00 3.69
4919 7373 3.468140 GAGCACCCGGAGTACCCC 61.468 72.222 0.73 0.00 0.00 4.95
4920 7374 4.326227 AGCACCCGGAGTACCCCA 62.326 66.667 0.73 0.00 0.00 4.96
4921 7375 3.087906 GCACCCGGAGTACCCCAT 61.088 66.667 0.73 0.00 0.00 4.00
4922 7376 1.763256 GCACCCGGAGTACCCCATA 60.763 63.158 0.73 0.00 0.00 2.74
4923 7377 1.755393 GCACCCGGAGTACCCCATAG 61.755 65.000 0.73 0.00 0.00 2.23
4924 7378 0.105862 CACCCGGAGTACCCCATAGA 60.106 60.000 0.73 0.00 0.00 1.98
4925 7379 0.865362 ACCCGGAGTACCCCATAGAT 59.135 55.000 0.73 0.00 0.00 1.98
4926 7380 1.267121 CCCGGAGTACCCCATAGATG 58.733 60.000 0.73 0.00 0.00 2.90
4940 7394 5.923733 CCATAGATGGGAGTACCTGATAC 57.076 47.826 0.10 0.00 44.31 2.24
4941 7395 5.584913 CCATAGATGGGAGTACCTGATACT 58.415 45.833 0.10 0.00 44.31 2.12
4942 7396 6.019748 CCATAGATGGGAGTACCTGATACTT 58.980 44.000 0.10 0.00 41.70 2.24
4943 7397 6.498651 CCATAGATGGGAGTACCTGATACTTT 59.501 42.308 0.10 0.00 41.70 2.66
4944 7398 7.016661 CCATAGATGGGAGTACCTGATACTTTT 59.983 40.741 0.10 0.00 41.70 2.27
4945 7399 6.487299 AGATGGGAGTACCTGATACTTTTC 57.513 41.667 0.00 0.00 44.64 2.29
4946 7400 5.367060 AGATGGGAGTACCTGATACTTTTCC 59.633 44.000 0.00 0.00 44.64 3.13
4947 7401 3.778629 TGGGAGTACCTGATACTTTTCCC 59.221 47.826 0.00 0.00 44.64 3.97
4948 7402 3.136077 GGGAGTACCTGATACTTTTCCCC 59.864 52.174 0.00 0.00 44.64 4.81
4949 7403 4.038633 GGAGTACCTGATACTTTTCCCCT 58.961 47.826 0.00 0.00 44.64 4.79
4950 7404 4.141688 GGAGTACCTGATACTTTTCCCCTG 60.142 50.000 0.00 0.00 44.64 4.45
4969 7423 4.458397 CCTGCATATCCCATATCCATCAC 58.542 47.826 0.00 0.00 0.00 3.06
4992 7446 2.936202 AGAGCGTCAATTAATGGCCAT 58.064 42.857 14.09 14.09 0.00 4.40
4993 7447 2.880890 AGAGCGTCAATTAATGGCCATC 59.119 45.455 21.08 3.17 0.00 3.51
4994 7448 1.603802 AGCGTCAATTAATGGCCATCG 59.396 47.619 21.08 17.15 0.00 3.84
4995 7449 1.601903 GCGTCAATTAATGGCCATCGA 59.398 47.619 21.08 11.26 0.00 3.59
4996 7450 2.602217 GCGTCAATTAATGGCCATCGAC 60.602 50.000 21.08 17.98 0.00 4.20
4997 7451 2.348498 CGTCAATTAATGGCCATCGACG 60.348 50.000 26.06 26.06 38.99 5.12
4998 7452 1.601903 TCAATTAATGGCCATCGACGC 59.398 47.619 21.08 0.00 0.00 5.19
4999 7453 0.586319 AATTAATGGCCATCGACGCG 59.414 50.000 21.08 3.53 0.00 6.01
5000 7454 0.531974 ATTAATGGCCATCGACGCGT 60.532 50.000 21.08 13.85 0.00 6.01
5002 7456 0.741574 TAATGGCCATCGACGCGTTT 60.742 50.000 21.08 2.80 0.00 3.60
5003 7457 1.977594 AATGGCCATCGACGCGTTTC 61.978 55.000 21.08 0.00 0.00 2.78
5004 7458 4.204891 GGCCATCGACGCGTTTCG 62.205 66.667 15.53 14.34 45.38 3.46
5021 7475 4.671406 GCTCCAAAATGCGGCAAA 57.329 50.000 6.82 0.00 0.00 3.68
5022 7476 3.142124 GCTCCAAAATGCGGCAAAT 57.858 47.368 6.82 0.00 0.00 2.32
5023 7477 1.001624 GCTCCAAAATGCGGCAAATC 58.998 50.000 6.82 0.00 0.00 2.17
5024 7478 1.643880 CTCCAAAATGCGGCAAATCC 58.356 50.000 6.82 0.00 0.00 3.01
5025 7479 0.248843 TCCAAAATGCGGCAAATCCC 59.751 50.000 6.82 0.00 0.00 3.85
5026 7480 0.036577 CCAAAATGCGGCAAATCCCA 60.037 50.000 6.82 0.00 0.00 4.37
5027 7481 1.077915 CAAAATGCGGCAAATCCCAC 58.922 50.000 6.82 0.00 0.00 4.61
5028 7482 0.036483 AAAATGCGGCAAATCCCACC 60.036 50.000 6.82 0.00 0.00 4.61
5058 7512 2.890109 CTCGAGCATGCCCATTCGC 61.890 63.158 19.02 0.00 33.36 4.70
5067 7521 0.179032 TGCCCATTCGCGGATATTGT 60.179 50.000 6.13 0.00 0.00 2.71
5076 7530 3.779303 CGGATATTGTTCGCACACG 57.221 52.632 0.00 0.00 42.01 4.49
5100 7554 1.141881 GTCATCGTGCACCCTCGAT 59.858 57.895 12.15 7.74 45.40 3.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.146984 CTTGCATGAAGATTCATACATGTTTTT 57.853 29.630 2.30 0.00 45.62 1.94
13 14 8.525316 TCTTGCATGAAGATTCATACATGTTTT 58.475 29.630 2.30 0.00 45.62 2.43
14 15 8.058667 TCTTGCATGAAGATTCATACATGTTT 57.941 30.769 2.30 0.00 45.62 2.83
15 16 7.634671 TCTTGCATGAAGATTCATACATGTT 57.365 32.000 2.30 0.00 45.62 2.71
68 69 4.354587 CCACAGTTTTGCTTTCTCTGTTC 58.645 43.478 0.00 0.00 37.27 3.18
69 70 3.131046 CCCACAGTTTTGCTTTCTCTGTT 59.869 43.478 0.00 0.00 37.27 3.16
73 74 2.294512 CCTCCCACAGTTTTGCTTTCTC 59.705 50.000 0.00 0.00 0.00 2.87
75 76 1.341209 CCCTCCCACAGTTTTGCTTTC 59.659 52.381 0.00 0.00 0.00 2.62
78 79 0.178990 GACCCTCCCACAGTTTTGCT 60.179 55.000 0.00 0.00 0.00 3.91
95 97 3.771577 TCTTTTCTCTTGGGGACAGAC 57.228 47.619 0.00 0.00 44.54 3.51
97 99 4.829492 ACATTTCTTTTCTCTTGGGGACAG 59.171 41.667 0.00 0.00 44.54 3.51
99 101 4.827284 TCACATTTCTTTTCTCTTGGGGAC 59.173 41.667 0.00 0.00 0.00 4.46
252 259 1.276622 TTCCTTGGAGGCTGGACTAC 58.723 55.000 0.00 0.00 34.61 2.73
260 274 1.257743 GGTTTCCTTTCCTTGGAGGC 58.742 55.000 0.00 0.00 34.61 4.70
312 327 1.368203 TCTTCCCCTCTTGGATGGGTA 59.632 52.381 7.56 0.00 41.82 3.69
313 328 0.121197 TCTTCCCCTCTTGGATGGGT 59.879 55.000 7.56 0.00 41.82 4.51
317 332 2.578480 GGTTTCTCTTCCCCTCTTGGAT 59.422 50.000 0.00 0.00 35.39 3.41
318 333 1.985895 GGTTTCTCTTCCCCTCTTGGA 59.014 52.381 0.00 0.00 35.39 3.53
326 341 1.995376 TTGGCTTGGTTTCTCTTCCC 58.005 50.000 0.00 0.00 0.00 3.97
339 358 1.627864 ATACGGTTTGGCTTTGGCTT 58.372 45.000 0.00 0.00 38.73 4.35
340 359 2.365582 CTATACGGTTTGGCTTTGGCT 58.634 47.619 0.00 0.00 38.73 4.75
341 360 1.404035 CCTATACGGTTTGGCTTTGGC 59.596 52.381 0.00 0.00 37.82 4.52
342 361 2.943033 CTCCTATACGGTTTGGCTTTGG 59.057 50.000 0.00 0.00 0.00 3.28
343 362 3.374058 CACTCCTATACGGTTTGGCTTTG 59.626 47.826 0.00 0.00 0.00 2.77
344 363 3.606687 CACTCCTATACGGTTTGGCTTT 58.393 45.455 0.00 0.00 0.00 3.51
646 700 2.978010 CACCGCAACCCACTCACC 60.978 66.667 0.00 0.00 0.00 4.02
657 711 4.248842 CACCACCAGTCCACCGCA 62.249 66.667 0.00 0.00 0.00 5.69
941 1020 1.014352 GTGTGTGTGTTGGTGAGACC 58.986 55.000 0.00 0.00 39.22 3.85
979 1070 7.683578 TCCATCTTCTTCTTCTTTGATTCTCA 58.316 34.615 0.00 0.00 0.00 3.27
1146 1240 2.546584 GCCAAGGAACAAGGCTTTTCAG 60.547 50.000 17.69 3.40 45.10 3.02
1190 1284 0.612744 AGCAAGCCCAAGAGAGAGAC 59.387 55.000 0.00 0.00 0.00 3.36
1246 1366 9.277783 CTCTAATCTGACCAAAAGAAGAAGAAA 57.722 33.333 0.00 0.00 0.00 2.52
1247 1367 8.651389 TCTCTAATCTGACCAAAAGAAGAAGAA 58.349 33.333 0.00 0.00 0.00 2.52
1316 1436 4.670896 TTTCTTCTTGCCCAAAAAGAGG 57.329 40.909 0.00 0.00 35.20 3.69
1330 1450 3.711190 ACACCAAAAAGGGCATTTCTTCT 59.289 39.130 0.00 0.00 43.89 2.85
1371 1491 3.221771 CATGACAAAACAGAGAACCCCA 58.778 45.455 0.00 0.00 0.00 4.96
1404 1538 2.122729 CTGGGAGTGGGAGTGGGA 59.877 66.667 0.00 0.00 0.00 4.37
1405 1539 2.203998 ACTGGGAGTGGGAGTGGG 60.204 66.667 0.00 0.00 0.00 4.61
1406 1540 2.294078 GGACTGGGAGTGGGAGTGG 61.294 68.421 0.00 0.00 0.00 4.00
1407 1541 2.294078 GGGACTGGGAGTGGGAGTG 61.294 68.421 0.00 0.00 0.00 3.51
1408 1542 2.122954 GGGACTGGGAGTGGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
1409 1543 1.992277 CTGGGACTGGGAGTGGGAG 60.992 68.421 0.00 0.00 0.00 4.30
1410 1544 2.122729 CTGGGACTGGGAGTGGGA 59.877 66.667 0.00 0.00 0.00 4.37
1411 1545 2.203998 ACTGGGACTGGGAGTGGG 60.204 66.667 0.00 0.00 0.00 4.61
1412 1546 0.911525 ATCACTGGGACTGGGAGTGG 60.912 60.000 0.00 0.00 44.45 4.00
1413 1547 1.866015 TATCACTGGGACTGGGAGTG 58.134 55.000 0.00 0.00 44.45 3.51
1414 1548 2.877154 ATATCACTGGGACTGGGAGT 57.123 50.000 0.00 0.00 44.45 3.85
1415 1549 3.169099 CCTATATCACTGGGACTGGGAG 58.831 54.545 0.00 0.00 44.45 4.30
1416 1550 2.795360 TCCTATATCACTGGGACTGGGA 59.205 50.000 0.00 0.00 45.53 4.37
1417 1551 3.169099 CTCCTATATCACTGGGACTGGG 58.831 54.545 0.00 0.00 0.00 4.45
1418 1552 3.850752 ACTCCTATATCACTGGGACTGG 58.149 50.000 0.00 0.00 0.00 4.00
1419 1553 5.636123 ACTACTCCTATATCACTGGGACTG 58.364 45.833 0.00 0.00 0.00 3.51
1437 1571 9.730420 CGGCAATAATTAATTTTTGCTACTACT 57.270 29.630 34.69 4.94 46.67 2.57
1454 1588 3.428045 GCTTTTCACTCTGCGGCAATAAT 60.428 43.478 3.44 0.00 0.00 1.28
1481 1615 6.475727 TCATCGCTGCTGTAAATTTCTAGTAC 59.524 38.462 0.00 0.00 0.00 2.73
1991 2125 3.992641 TCTCCGCAGTCCCCTCCA 61.993 66.667 0.00 0.00 0.00 3.86
2084 2218 5.401033 ACGAGTACTACTAGTAACATGCG 57.599 43.478 3.76 8.05 32.24 4.73
2085 2219 7.859598 ACATACGAGTACTACTAGTAACATGC 58.140 38.462 11.77 0.00 39.21 4.06
2107 2241 9.836864 AGGCAGATAAAAGAAAAAGAAAAACAT 57.163 25.926 0.00 0.00 0.00 2.71
2121 2255 9.290988 TCATCTACTCTAGTAGGCAGATAAAAG 57.709 37.037 15.39 0.00 46.01 2.27
2130 2264 8.802267 AGAAATTCATCATCTACTCTAGTAGGC 58.198 37.037 15.39 0.00 46.01 3.93
2137 2271 9.545105 GAACATCAGAAATTCATCATCTACTCT 57.455 33.333 0.00 0.00 0.00 3.24
2138 2272 9.322773 TGAACATCAGAAATTCATCATCTACTC 57.677 33.333 0.00 0.00 0.00 2.59
2139 2273 9.848710 ATGAACATCAGAAATTCATCATCTACT 57.151 29.630 6.67 0.00 38.40 2.57
2145 2279 7.819644 ACGAAATGAACATCAGAAATTCATCA 58.180 30.769 11.23 0.00 41.17 3.07
2323 2519 9.322769 GGAGGGAGTAGTATTTAGGATGATTTA 57.677 37.037 0.00 0.00 0.00 1.40
2339 2535 7.614583 TCTTATATTATGGAACGGAGGGAGTAG 59.385 40.741 0.00 0.00 0.00 2.57
2340 2536 7.472741 TCTTATATTATGGAACGGAGGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
2341 2537 6.320518 TCTTATATTATGGAACGGAGGGAGT 58.679 40.000 0.00 0.00 0.00 3.85
2342 2538 6.852420 TCTTATATTATGGAACGGAGGGAG 57.148 41.667 0.00 0.00 0.00 4.30
2343 2539 7.001099 GTTCTTATATTATGGAACGGAGGGA 57.999 40.000 7.88 0.00 0.00 4.20
2358 2554 8.932791 CCAGTAGTGTCAAAAACGTTCTTATAT 58.067 33.333 0.00 0.00 0.00 0.86
2359 2555 7.385752 CCCAGTAGTGTCAAAAACGTTCTTATA 59.614 37.037 0.00 0.00 0.00 0.98
2360 2556 6.204108 CCCAGTAGTGTCAAAAACGTTCTTAT 59.796 38.462 0.00 0.00 0.00 1.73
2361 2557 5.524646 CCCAGTAGTGTCAAAAACGTTCTTA 59.475 40.000 0.00 0.00 0.00 2.10
2362 2558 4.334481 CCCAGTAGTGTCAAAAACGTTCTT 59.666 41.667 0.00 0.00 0.00 2.52
2363 2559 3.875134 CCCAGTAGTGTCAAAAACGTTCT 59.125 43.478 0.00 0.00 0.00 3.01
2364 2560 3.872771 TCCCAGTAGTGTCAAAAACGTTC 59.127 43.478 0.00 0.00 0.00 3.95
2365 2561 3.624410 GTCCCAGTAGTGTCAAAAACGTT 59.376 43.478 0.00 0.00 0.00 3.99
2366 2562 3.200483 GTCCCAGTAGTGTCAAAAACGT 58.800 45.455 0.00 0.00 0.00 3.99
2367 2563 2.220133 CGTCCCAGTAGTGTCAAAAACG 59.780 50.000 0.00 0.00 0.00 3.60
2368 2564 2.546789 CCGTCCCAGTAGTGTCAAAAAC 59.453 50.000 0.00 0.00 0.00 2.43
2369 2565 2.435069 TCCGTCCCAGTAGTGTCAAAAA 59.565 45.455 0.00 0.00 0.00 1.94
2370 2566 2.036733 CTCCGTCCCAGTAGTGTCAAAA 59.963 50.000 0.00 0.00 0.00 2.44
2371 2567 1.616865 CTCCGTCCCAGTAGTGTCAAA 59.383 52.381 0.00 0.00 0.00 2.69
2372 2568 1.254026 CTCCGTCCCAGTAGTGTCAA 58.746 55.000 0.00 0.00 0.00 3.18
2373 2569 0.611062 CCTCCGTCCCAGTAGTGTCA 60.611 60.000 0.00 0.00 0.00 3.58
2374 2570 1.321074 CCCTCCGTCCCAGTAGTGTC 61.321 65.000 0.00 0.00 0.00 3.67
2375 2571 1.305046 CCCTCCGTCCCAGTAGTGT 60.305 63.158 0.00 0.00 0.00 3.55
2376 2572 1.000019 TCCCTCCGTCCCAGTAGTG 60.000 63.158 0.00 0.00 0.00 2.74
2377 2573 1.306970 CTCCCTCCGTCCCAGTAGT 59.693 63.158 0.00 0.00 0.00 2.73
2378 2574 0.549950 TACTCCCTCCGTCCCAGTAG 59.450 60.000 0.00 0.00 0.00 2.57
2379 2575 0.257039 GTACTCCCTCCGTCCCAGTA 59.743 60.000 0.00 0.00 0.00 2.74
2380 2576 1.000107 GTACTCCCTCCGTCCCAGT 60.000 63.158 0.00 0.00 0.00 4.00
2381 2577 0.549950 TAGTACTCCCTCCGTCCCAG 59.450 60.000 0.00 0.00 0.00 4.45
2382 2578 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
2383 2579 2.149973 TTTAGTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
2384 2580 4.468713 AGTATTTAGTACTCCCTCCGTCC 58.531 47.826 0.00 0.00 39.46 4.79
2385 2581 7.573968 TTTAGTATTTAGTACTCCCTCCGTC 57.426 40.000 0.00 0.00 42.63 4.79
2386 2582 9.072375 GTATTTAGTATTTAGTACTCCCTCCGT 57.928 37.037 0.00 0.00 42.63 4.69
2387 2583 9.294614 AGTATTTAGTATTTAGTACTCCCTCCG 57.705 37.037 0.00 0.00 42.63 4.63
2611 2815 6.420588 TGTACTACGTATTTGTTTGTGCAAC 58.579 36.000 0.00 0.00 35.71 4.17
2628 2832 7.701501 GGTACTGAAGCAAGTAGAATGTACTAC 59.298 40.741 0.00 0.00 41.87 2.73
2736 2943 3.903282 CGGCCATTTGGATGCCCG 61.903 66.667 2.24 0.00 46.17 6.13
2797 3004 0.952984 AACAGCTTGCGCTTCTCCTC 60.953 55.000 9.73 0.00 46.47 3.71
2840 3047 4.263771 TGGAATGGAGGGAGTAAAAGGTTC 60.264 45.833 0.00 0.00 0.00 3.62
2887 3095 6.416750 GCACAAAGTTGTACTACCAAATCAAC 59.583 38.462 3.72 0.00 39.91 3.18
2890 3098 6.313744 AGCACAAAGTTGTACTACCAAATC 57.686 37.500 3.72 0.00 39.91 2.17
2892 3100 7.627298 TTTAGCACAAAGTTGTACTACCAAA 57.373 32.000 3.72 0.00 36.91 3.28
2894 3102 7.811117 AATTTAGCACAAAGTTGTACTACCA 57.189 32.000 3.72 0.00 36.91 3.25
3019 3590 1.896660 GAGTTCCCCGTTGCTTGCA 60.897 57.895 0.00 0.00 0.00 4.08
3020 3591 2.954611 GAGTTCCCCGTTGCTTGC 59.045 61.111 0.00 0.00 0.00 4.01
3029 3600 2.034104 GGTTTATGACCGAGTTCCCC 57.966 55.000 0.00 0.00 39.00 4.81
3107 3681 6.034161 AGAAATTGCTTTGGAAAGATGAGG 57.966 37.500 3.23 0.00 38.28 3.86
3116 3690 9.639563 TGACCAATATATAGAAATTGCTTTGGA 57.360 29.630 17.41 0.00 36.00 3.53
3165 3743 3.961477 TTCTGAACATGTGAACCAACG 57.039 42.857 0.00 0.00 0.00 4.10
3401 3988 1.088340 CAGTCTTGATGCCTCCGCTG 61.088 60.000 0.00 0.00 35.36 5.18
3443 4030 3.776659 TTCGTGTCGTTGCTGCGGA 62.777 57.895 0.00 0.00 0.00 5.54
3525 4112 2.028567 GTGTTGTGGAAGGGAGAGAGAG 60.029 54.545 0.00 0.00 0.00 3.20
3526 4113 1.971357 GTGTTGTGGAAGGGAGAGAGA 59.029 52.381 0.00 0.00 0.00 3.10
3592 4179 4.383226 GCTAAAACTCCCTCCCTCTGTAAG 60.383 50.000 0.00 0.00 0.00 2.34
3602 4189 6.349694 CCATCAAGAAAAGCTAAAACTCCCTC 60.350 42.308 0.00 0.00 0.00 4.30
3615 4202 4.872691 AGACACGATAGCCATCAAGAAAAG 59.127 41.667 0.00 0.00 42.67 2.27
3769 4368 2.651190 TGGATGGATGGATGGATGGAT 58.349 47.619 0.00 0.00 0.00 3.41
3770 4369 2.136974 TGGATGGATGGATGGATGGA 57.863 50.000 0.00 0.00 0.00 3.41
3771 4370 2.581246 AGATGGATGGATGGATGGATGG 59.419 50.000 0.00 0.00 0.00 3.51
3772 4371 3.621558 CAGATGGATGGATGGATGGATG 58.378 50.000 0.00 0.00 0.00 3.51
3773 4372 2.581246 CCAGATGGATGGATGGATGGAT 59.419 50.000 0.00 0.00 43.57 3.41
3774 4373 1.990327 CCAGATGGATGGATGGATGGA 59.010 52.381 0.00 0.00 43.57 3.41
3775 4374 1.990327 TCCAGATGGATGGATGGATGG 59.010 52.381 0.00 0.00 44.56 3.51
3813 4412 9.547753 CAATAACTTGTAGGAGTAGCACATAAT 57.452 33.333 0.00 0.00 0.00 1.28
3814 4413 8.755028 TCAATAACTTGTAGGAGTAGCACATAA 58.245 33.333 0.00 0.00 33.87 1.90
3815 4414 8.301252 TCAATAACTTGTAGGAGTAGCACATA 57.699 34.615 0.00 0.00 33.87 2.29
3843 4442 5.850938 GTCCCTGACATTAAAAATGGCACAG 60.851 44.000 4.05 9.38 35.12 3.66
4176 4795 7.334671 AGGCTTATTTTGCTCAACTAGTAGAAC 59.665 37.037 3.59 0.00 0.00 3.01
4191 4812 5.358160 CCTAGAACCAGGAAGGCTTATTTTG 59.642 44.000 0.00 0.00 43.14 2.44
4205 4826 3.190874 GTCGCAGAAATCCTAGAACCAG 58.809 50.000 0.00 0.00 39.69 4.00
4211 4832 1.209275 CGCCGTCGCAGAAATCCTAG 61.209 60.000 0.00 0.00 39.69 3.02
4227 4848 1.134788 ACACTACACATAAGAGCCGCC 60.135 52.381 0.00 0.00 0.00 6.13
4241 4863 5.415077 TCTGCTAGAGTTGGTCTAACACTAC 59.585 44.000 1.61 1.91 40.15 2.73
4323 4952 1.719780 CGACTCTGTTAGTGCGGTTTC 59.280 52.381 0.00 0.00 39.07 2.78
4329 4958 1.604396 GACGACGACTCTGTTAGTGC 58.396 55.000 0.00 0.00 39.07 4.40
4353 4984 3.576982 TCCATAAGTTATACAGGCCGAGG 59.423 47.826 0.00 0.00 0.00 4.63
4368 6795 0.599991 TATGGCGCACGCTCCATAAG 60.600 55.000 16.41 0.00 39.82 1.73
4391 6818 2.283143 AATATGGAGGCTTGCGGGCA 62.283 55.000 5.91 0.00 43.56 5.36
4437 6871 2.095604 ACTTCCCTCCAGCTCTATCC 57.904 55.000 0.00 0.00 0.00 2.59
4439 6873 3.454082 CTGAAACTTCCCTCCAGCTCTAT 59.546 47.826 0.00 0.00 0.00 1.98
4470 6924 0.110238 CGAACAACCACGCCATTGAG 60.110 55.000 0.63 0.00 0.00 3.02
4518 6972 0.969149 CCCGGATATGCAGCTACTGA 59.031 55.000 0.73 0.00 32.44 3.41
4528 6982 6.947464 AGTACCAGATATTTTCCCGGATATG 58.053 40.000 0.73 0.00 0.00 1.78
4529 6983 6.960542 AGAGTACCAGATATTTTCCCGGATAT 59.039 38.462 0.73 0.00 0.00 1.63
4530 6984 6.320518 AGAGTACCAGATATTTTCCCGGATA 58.679 40.000 0.73 0.00 0.00 2.59
4531 6985 5.155905 AGAGTACCAGATATTTTCCCGGAT 58.844 41.667 0.73 0.00 0.00 4.18
4532 6986 4.553678 AGAGTACCAGATATTTTCCCGGA 58.446 43.478 0.73 0.00 0.00 5.14
4533 6987 4.344102 TGAGAGTACCAGATATTTTCCCGG 59.656 45.833 0.00 0.00 0.00 5.73
4534 6988 5.531122 TGAGAGTACCAGATATTTTCCCG 57.469 43.478 0.00 0.00 0.00 5.14
4535 6989 6.271159 AGGATGAGAGTACCAGATATTTTCCC 59.729 42.308 0.00 0.00 0.00 3.97
4536 6990 7.309770 AGGATGAGAGTACCAGATATTTTCC 57.690 40.000 0.00 0.00 0.00 3.13
4537 6991 7.659390 CCAAGGATGAGAGTACCAGATATTTTC 59.341 40.741 0.00 0.00 0.00 2.29
4538 6992 7.420680 CCCAAGGATGAGAGTACCAGATATTTT 60.421 40.741 0.00 0.00 0.00 1.82
4539 6993 6.043706 CCCAAGGATGAGAGTACCAGATATTT 59.956 42.308 0.00 0.00 0.00 1.40
4540 6994 5.545723 CCCAAGGATGAGAGTACCAGATATT 59.454 44.000 0.00 0.00 0.00 1.28
4541 6995 5.090139 CCCAAGGATGAGAGTACCAGATAT 58.910 45.833 0.00 0.00 0.00 1.63
4542 6996 4.483950 CCCAAGGATGAGAGTACCAGATA 58.516 47.826 0.00 0.00 0.00 1.98
4543 6997 3.312890 CCCAAGGATGAGAGTACCAGAT 58.687 50.000 0.00 0.00 0.00 2.90
4544 6998 2.752030 CCCAAGGATGAGAGTACCAGA 58.248 52.381 0.00 0.00 0.00 3.86
4545 6999 1.139853 GCCCAAGGATGAGAGTACCAG 59.860 57.143 0.00 0.00 0.00 4.00
4546 7000 1.204146 GCCCAAGGATGAGAGTACCA 58.796 55.000 0.00 0.00 0.00 3.25
4547 7001 0.470341 GGCCCAAGGATGAGAGTACC 59.530 60.000 0.00 0.00 0.00 3.34
4548 7002 0.470341 GGGCCCAAGGATGAGAGTAC 59.530 60.000 19.95 0.00 0.00 2.73
4549 7003 1.048724 CGGGCCCAAGGATGAGAGTA 61.049 60.000 24.92 0.00 0.00 2.59
4550 7004 2.370445 CGGGCCCAAGGATGAGAGT 61.370 63.158 24.92 0.00 0.00 3.24
4551 7005 2.507944 CGGGCCCAAGGATGAGAG 59.492 66.667 24.92 0.00 0.00 3.20
4552 7006 3.089874 CCGGGCCCAAGGATGAGA 61.090 66.667 24.92 0.00 0.00 3.27
4553 7007 3.411517 ACCGGGCCCAAGGATGAG 61.412 66.667 24.92 1.64 0.00 2.90
4554 7008 3.727258 CACCGGGCCCAAGGATGA 61.727 66.667 24.92 0.00 0.00 2.92
4559 7013 4.659172 TGAAGCACCGGGCCCAAG 62.659 66.667 24.92 15.59 46.50 3.61
4560 7014 4.211330 TTGAAGCACCGGGCCCAA 62.211 61.111 24.92 10.75 46.50 4.12
4561 7015 4.659172 CTTGAAGCACCGGGCCCA 62.659 66.667 24.92 5.02 46.50 5.36
4562 7016 4.660938 ACTTGAAGCACCGGGCCC 62.661 66.667 13.57 13.57 46.50 5.80
4563 7017 2.597510 AACTTGAAGCACCGGGCC 60.598 61.111 6.32 0.00 46.50 5.80
4564 7018 1.452145 TTGAACTTGAAGCACCGGGC 61.452 55.000 6.32 6.61 45.30 6.13
4565 7019 1.028905 TTTGAACTTGAAGCACCGGG 58.971 50.000 6.32 0.00 0.00 5.73
4566 7020 2.857748 GTTTTTGAACTTGAAGCACCGG 59.142 45.455 0.00 0.00 0.00 5.28
4567 7021 3.506810 TGTTTTTGAACTTGAAGCACCG 58.493 40.909 0.00 0.00 0.00 4.94
4568 7022 5.854431 TTTGTTTTTGAACTTGAAGCACC 57.146 34.783 0.00 0.00 0.00 5.01
4569 7023 8.726650 AAAATTTGTTTTTGAACTTGAAGCAC 57.273 26.923 0.00 0.00 36.18 4.40
4617 7071 9.271828 ACATTCCTTGCGAAAATTTATCTTTTT 57.728 25.926 0.00 0.00 33.08 1.94
4618 7072 8.711457 CACATTCCTTGCGAAAATTTATCTTTT 58.289 29.630 0.00 0.00 33.08 2.27
4619 7073 8.087750 TCACATTCCTTGCGAAAATTTATCTTT 58.912 29.630 0.00 0.00 33.08 2.52
4620 7074 7.542130 GTCACATTCCTTGCGAAAATTTATCTT 59.458 33.333 0.00 0.00 33.08 2.40
4621 7075 7.029563 GTCACATTCCTTGCGAAAATTTATCT 58.970 34.615 0.00 0.00 33.08 1.98
4622 7076 7.029563 AGTCACATTCCTTGCGAAAATTTATC 58.970 34.615 0.00 0.00 33.08 1.75
4623 7077 6.924111 AGTCACATTCCTTGCGAAAATTTAT 58.076 32.000 0.00 0.00 33.08 1.40
4624 7078 6.325919 AGTCACATTCCTTGCGAAAATTTA 57.674 33.333 0.00 0.00 33.08 1.40
4625 7079 5.200368 AGTCACATTCCTTGCGAAAATTT 57.800 34.783 0.00 0.00 33.08 1.82
4626 7080 4.853924 AGTCACATTCCTTGCGAAAATT 57.146 36.364 0.00 0.00 33.08 1.82
4627 7081 4.759693 TGTAGTCACATTCCTTGCGAAAAT 59.240 37.500 0.00 0.00 33.08 1.82
4628 7082 4.130857 TGTAGTCACATTCCTTGCGAAAA 58.869 39.130 0.00 0.00 33.08 2.29
4629 7083 3.734463 TGTAGTCACATTCCTTGCGAAA 58.266 40.909 0.00 0.00 33.08 3.46
4630 7084 3.394674 TGTAGTCACATTCCTTGCGAA 57.605 42.857 0.00 0.00 34.14 4.70
4631 7085 3.064207 GTTGTAGTCACATTCCTTGCGA 58.936 45.455 0.00 0.00 33.76 5.10
4632 7086 2.159627 GGTTGTAGTCACATTCCTTGCG 59.840 50.000 0.00 0.00 33.76 4.85
4633 7087 2.488153 GGGTTGTAGTCACATTCCTTGC 59.512 50.000 0.00 0.00 33.76 4.01
4634 7088 3.750371 TGGGTTGTAGTCACATTCCTTG 58.250 45.455 0.00 0.00 33.76 3.61
4635 7089 4.657814 ATGGGTTGTAGTCACATTCCTT 57.342 40.909 0.00 0.00 33.76 3.36
4636 7090 5.030147 TCTATGGGTTGTAGTCACATTCCT 58.970 41.667 0.00 0.00 33.76 3.36
4637 7091 5.353394 TCTATGGGTTGTAGTCACATTCC 57.647 43.478 0.00 0.00 33.76 3.01
4638 7092 7.865706 ATTTCTATGGGTTGTAGTCACATTC 57.134 36.000 0.00 0.00 33.76 2.67
4639 7093 8.650143 AAATTTCTATGGGTTGTAGTCACATT 57.350 30.769 0.00 0.00 33.76 2.71
4640 7094 7.888021 TGAAATTTCTATGGGTTGTAGTCACAT 59.112 33.333 18.64 0.00 33.76 3.21
4641 7095 7.227873 TGAAATTTCTATGGGTTGTAGTCACA 58.772 34.615 18.64 0.00 0.00 3.58
4642 7096 7.148239 CCTGAAATTTCTATGGGTTGTAGTCAC 60.148 40.741 18.64 0.00 0.00 3.67
4643 7097 6.884295 CCTGAAATTTCTATGGGTTGTAGTCA 59.116 38.462 18.64 0.00 0.00 3.41
4644 7098 6.884836 ACCTGAAATTTCTATGGGTTGTAGTC 59.115 38.462 18.64 0.00 0.00 2.59
4645 7099 6.790319 ACCTGAAATTTCTATGGGTTGTAGT 58.210 36.000 18.64 0.00 0.00 2.73
4646 7100 6.318900 GGACCTGAAATTTCTATGGGTTGTAG 59.681 42.308 18.64 4.16 0.00 2.74
4647 7101 6.184789 GGACCTGAAATTTCTATGGGTTGTA 58.815 40.000 18.64 0.00 0.00 2.41
4648 7102 5.016831 GGACCTGAAATTTCTATGGGTTGT 58.983 41.667 18.64 4.89 0.00 3.32
4649 7103 5.016173 TGGACCTGAAATTTCTATGGGTTG 58.984 41.667 18.64 2.11 0.00 3.77
4650 7104 5.269554 TGGACCTGAAATTTCTATGGGTT 57.730 39.130 18.64 4.53 0.00 4.11
4651 7105 4.946160 TGGACCTGAAATTTCTATGGGT 57.054 40.909 18.64 18.42 0.00 4.51
4652 7106 5.716703 AGTTTGGACCTGAAATTTCTATGGG 59.283 40.000 18.64 15.89 0.00 4.00
4653 7107 6.403636 CGAGTTTGGACCTGAAATTTCTATGG 60.404 42.308 18.64 18.02 0.00 2.74
4654 7108 6.371548 TCGAGTTTGGACCTGAAATTTCTATG 59.628 38.462 18.64 9.57 0.00 2.23
4655 7109 6.472887 TCGAGTTTGGACCTGAAATTTCTAT 58.527 36.000 18.64 4.62 0.00 1.98
4656 7110 5.860611 TCGAGTTTGGACCTGAAATTTCTA 58.139 37.500 18.64 5.16 0.00 2.10
4657 7111 4.714632 TCGAGTTTGGACCTGAAATTTCT 58.285 39.130 18.64 0.00 0.00 2.52
4658 7112 5.432885 TTCGAGTTTGGACCTGAAATTTC 57.567 39.130 11.41 11.41 0.00 2.17
4659 7113 5.845391 TTTCGAGTTTGGACCTGAAATTT 57.155 34.783 0.00 0.00 29.61 1.82
4660 7114 5.301805 ACATTTCGAGTTTGGACCTGAAATT 59.698 36.000 0.00 0.00 37.71 1.82
4661 7115 4.827284 ACATTTCGAGTTTGGACCTGAAAT 59.173 37.500 0.00 0.00 39.08 2.17
4662 7116 4.204012 ACATTTCGAGTTTGGACCTGAAA 58.796 39.130 0.00 0.00 35.33 2.69
4663 7117 3.815809 ACATTTCGAGTTTGGACCTGAA 58.184 40.909 0.00 0.00 0.00 3.02
4664 7118 3.485463 ACATTTCGAGTTTGGACCTGA 57.515 42.857 0.00 0.00 0.00 3.86
4665 7119 4.062293 TGTACATTTCGAGTTTGGACCTG 58.938 43.478 0.00 0.00 0.00 4.00
4666 7120 4.345859 TGTACATTTCGAGTTTGGACCT 57.654 40.909 0.00 0.00 0.00 3.85
4667 7121 5.180492 TCAATGTACATTTCGAGTTTGGACC 59.820 40.000 18.50 0.00 0.00 4.46
4668 7122 6.147164 TCTCAATGTACATTTCGAGTTTGGAC 59.853 38.462 24.39 0.99 0.00 4.02
4669 7123 6.227522 TCTCAATGTACATTTCGAGTTTGGA 58.772 36.000 24.39 13.95 0.00 3.53
4670 7124 6.480524 TCTCAATGTACATTTCGAGTTTGG 57.519 37.500 24.39 11.22 0.00 3.28
4671 7125 7.855409 TGTTTCTCAATGTACATTTCGAGTTTG 59.145 33.333 24.39 13.01 0.00 2.93
4672 7126 7.925993 TGTTTCTCAATGTACATTTCGAGTTT 58.074 30.769 24.39 2.86 0.00 2.66
4673 7127 7.490962 TGTTTCTCAATGTACATTTCGAGTT 57.509 32.000 24.39 3.49 0.00 3.01
4674 7128 7.490962 TTGTTTCTCAATGTACATTTCGAGT 57.509 32.000 24.39 3.40 0.00 4.18
4675 7129 8.781067 TTTTGTTTCTCAATGTACATTTCGAG 57.219 30.769 18.50 20.39 35.84 4.04
4676 7130 9.743057 ATTTTTGTTTCTCAATGTACATTTCGA 57.257 25.926 18.50 14.07 35.84 3.71
4700 7154 9.293404 CCACTATTCACATCTGGATTTCATATT 57.707 33.333 0.00 0.00 0.00 1.28
4701 7155 7.392673 GCCACTATTCACATCTGGATTTCATAT 59.607 37.037 0.00 0.00 0.00 1.78
4702 7156 6.712095 GCCACTATTCACATCTGGATTTCATA 59.288 38.462 0.00 0.00 0.00 2.15
4703 7157 5.533903 GCCACTATTCACATCTGGATTTCAT 59.466 40.000 0.00 0.00 0.00 2.57
4704 7158 4.883585 GCCACTATTCACATCTGGATTTCA 59.116 41.667 0.00 0.00 0.00 2.69
4705 7159 5.128919 AGCCACTATTCACATCTGGATTTC 58.871 41.667 0.00 0.00 0.00 2.17
4706 7160 5.121380 AGCCACTATTCACATCTGGATTT 57.879 39.130 0.00 0.00 0.00 2.17
4707 7161 4.785346 AGCCACTATTCACATCTGGATT 57.215 40.909 0.00 0.00 0.00 3.01
4708 7162 6.445451 AATAGCCACTATTCACATCTGGAT 57.555 37.500 0.00 0.00 31.88 3.41
4709 7163 5.894298 AATAGCCACTATTCACATCTGGA 57.106 39.130 0.00 0.00 31.88 3.86
4710 7164 6.543465 TCAAAATAGCCACTATTCACATCTGG 59.457 38.462 0.57 0.00 35.85 3.86
4711 7165 7.558161 TCAAAATAGCCACTATTCACATCTG 57.442 36.000 0.57 0.00 35.85 2.90
4712 7166 8.216423 AGATCAAAATAGCCACTATTCACATCT 58.784 33.333 0.00 5.22 35.85 2.90
4713 7167 8.388484 AGATCAAAATAGCCACTATTCACATC 57.612 34.615 0.00 3.45 35.85 3.06
4714 7168 8.757982 AAGATCAAAATAGCCACTATTCACAT 57.242 30.769 0.00 0.00 35.85 3.21
4715 7169 8.461222 CAAAGATCAAAATAGCCACTATTCACA 58.539 33.333 0.00 0.00 35.85 3.58
4716 7170 8.462016 ACAAAGATCAAAATAGCCACTATTCAC 58.538 33.333 0.00 0.00 35.85 3.18
4717 7171 8.579850 ACAAAGATCAAAATAGCCACTATTCA 57.420 30.769 0.00 0.00 35.85 2.57
4718 7172 8.897752 AGACAAAGATCAAAATAGCCACTATTC 58.102 33.333 0.00 0.00 35.85 1.75
4719 7173 8.814038 AGACAAAGATCAAAATAGCCACTATT 57.186 30.769 0.00 0.00 38.17 1.73
4720 7174 8.814038 AAGACAAAGATCAAAATAGCCACTAT 57.186 30.769 0.00 0.00 0.00 2.12
4721 7175 8.635765 AAAGACAAAGATCAAAATAGCCACTA 57.364 30.769 0.00 0.00 0.00 2.74
4722 7176 7.530426 AAAGACAAAGATCAAAATAGCCACT 57.470 32.000 0.00 0.00 0.00 4.00
4723 7177 8.593492 AAAAAGACAAAGATCAAAATAGCCAC 57.407 30.769 0.00 0.00 0.00 5.01
4746 7200 7.048629 TGAAATCTGGCATGAAGTGTAAAAA 57.951 32.000 0.00 0.00 0.00 1.94
4747 7201 6.647334 TGAAATCTGGCATGAAGTGTAAAA 57.353 33.333 0.00 0.00 0.00 1.52
4748 7202 6.839124 ATGAAATCTGGCATGAAGTGTAAA 57.161 33.333 0.00 0.00 0.00 2.01
4749 7203 8.523915 AATATGAAATCTGGCATGAAGTGTAA 57.476 30.769 0.00 0.00 0.00 2.41
4750 7204 8.523915 AAATATGAAATCTGGCATGAAGTGTA 57.476 30.769 0.00 0.00 0.00 2.90
4751 7205 7.414222 AAATATGAAATCTGGCATGAAGTGT 57.586 32.000 0.00 0.00 0.00 3.55
4752 7206 8.712285 AAAAATATGAAATCTGGCATGAAGTG 57.288 30.769 0.00 0.00 0.00 3.16
4778 7232 8.776470 CCAAACTTGAAATGCACATTAAGAAAT 58.224 29.630 11.15 0.00 0.00 2.17
4779 7233 7.984050 TCCAAACTTGAAATGCACATTAAGAAA 59.016 29.630 11.15 0.00 0.00 2.52
4780 7234 7.437862 GTCCAAACTTGAAATGCACATTAAGAA 59.562 33.333 11.15 0.00 0.00 2.52
4781 7235 6.922957 GTCCAAACTTGAAATGCACATTAAGA 59.077 34.615 11.15 0.00 0.00 2.10
4782 7236 6.146021 GGTCCAAACTTGAAATGCACATTAAG 59.854 38.462 0.00 0.00 0.00 1.85
4783 7237 5.988561 GGTCCAAACTTGAAATGCACATTAA 59.011 36.000 0.00 0.00 0.00 1.40
4784 7238 5.304101 AGGTCCAAACTTGAAATGCACATTA 59.696 36.000 0.00 0.00 0.00 1.90
4785 7239 4.101430 AGGTCCAAACTTGAAATGCACATT 59.899 37.500 0.00 0.00 0.00 2.71
4786 7240 3.642848 AGGTCCAAACTTGAAATGCACAT 59.357 39.130 0.00 0.00 0.00 3.21
4787 7241 3.030291 AGGTCCAAACTTGAAATGCACA 58.970 40.909 0.00 0.00 0.00 4.57
4788 7242 3.733443 AGGTCCAAACTTGAAATGCAC 57.267 42.857 0.00 0.00 0.00 4.57
4789 7243 5.860941 TTAAGGTCCAAACTTGAAATGCA 57.139 34.783 0.00 0.00 0.00 3.96
4790 7244 7.728847 AATTTAAGGTCCAAACTTGAAATGC 57.271 32.000 0.00 0.00 29.12 3.56
4794 7248 9.825109 CCTAAAAATTTAAGGTCCAAACTTGAA 57.175 29.630 10.16 0.00 0.00 2.69
4795 7249 8.425703 CCCTAAAAATTTAAGGTCCAAACTTGA 58.574 33.333 15.06 0.00 0.00 3.02
4796 7250 7.659799 CCCCTAAAAATTTAAGGTCCAAACTTG 59.340 37.037 15.06 1.46 0.00 3.16
4797 7251 7.348801 ACCCCTAAAAATTTAAGGTCCAAACTT 59.651 33.333 15.06 0.00 28.48 2.66
4798 7252 6.847567 ACCCCTAAAAATTTAAGGTCCAAACT 59.152 34.615 15.06 0.00 28.48 2.66
4799 7253 7.069877 ACCCCTAAAAATTTAAGGTCCAAAC 57.930 36.000 15.06 0.00 28.48 2.93
4800 7254 7.127493 ACAACCCCTAAAAATTTAAGGTCCAAA 59.873 33.333 15.06 0.00 31.65 3.28
4801 7255 6.616137 ACAACCCCTAAAAATTTAAGGTCCAA 59.384 34.615 15.06 0.00 31.65 3.53
4802 7256 6.144625 ACAACCCCTAAAAATTTAAGGTCCA 58.855 36.000 15.06 0.00 31.65 4.02
4803 7257 6.675413 ACAACCCCTAAAAATTTAAGGTCC 57.325 37.500 15.06 0.00 31.65 4.46
4804 7258 8.413309 ACTACAACCCCTAAAAATTTAAGGTC 57.587 34.615 15.06 0.00 31.65 3.85
4805 7259 8.786710 AACTACAACCCCTAAAAATTTAAGGT 57.213 30.769 15.06 5.57 33.27 3.50
4811 7265 8.809066 GGAATGTAACTACAACCCCTAAAAATT 58.191 33.333 0.00 0.00 39.99 1.82
4812 7266 8.174757 AGGAATGTAACTACAACCCCTAAAAAT 58.825 33.333 10.70 0.00 39.99 1.82
4813 7267 7.528675 AGGAATGTAACTACAACCCCTAAAAA 58.471 34.615 10.70 0.00 39.99 1.94
4814 7268 7.093965 AGGAATGTAACTACAACCCCTAAAA 57.906 36.000 10.70 0.00 39.99 1.52
4815 7269 6.707273 AGGAATGTAACTACAACCCCTAAA 57.293 37.500 10.70 0.00 39.99 1.85
4816 7270 6.707273 AAGGAATGTAACTACAACCCCTAA 57.293 37.500 10.70 0.00 39.99 2.69
4817 7271 6.707273 AAAGGAATGTAACTACAACCCCTA 57.293 37.500 10.70 0.00 39.99 3.53
4818 7272 5.594199 AAAGGAATGTAACTACAACCCCT 57.406 39.130 10.70 7.24 39.99 4.79
4819 7273 5.771165 TCAAAAGGAATGTAACTACAACCCC 59.229 40.000 10.70 5.61 39.99 4.95
4820 7274 6.887626 TCAAAAGGAATGTAACTACAACCC 57.112 37.500 10.70 7.44 39.99 4.11
4821 7275 7.708998 TGTTCAAAAGGAATGTAACTACAACC 58.291 34.615 0.00 1.77 39.99 3.77
4822 7276 9.744468 AATGTTCAAAAGGAATGTAACTACAAC 57.256 29.630 0.00 0.00 39.99 3.32
4823 7277 9.959749 GAATGTTCAAAAGGAATGTAACTACAA 57.040 29.630 0.00 0.00 39.99 2.41
4824 7278 9.126151 TGAATGTTCAAAAGGAATGTAACTACA 57.874 29.630 0.00 0.00 37.93 2.74
4825 7279 9.394477 GTGAATGTTCAAAAGGAATGTAACTAC 57.606 33.333 0.00 0.00 39.21 2.73
4826 7280 9.126151 TGTGAATGTTCAAAAGGAATGTAACTA 57.874 29.630 0.00 0.00 39.21 2.24
4827 7281 8.006298 TGTGAATGTTCAAAAGGAATGTAACT 57.994 30.769 0.00 0.00 39.21 2.24
4828 7282 8.816640 ATGTGAATGTTCAAAAGGAATGTAAC 57.183 30.769 0.00 0.00 39.21 2.50
4829 7283 9.829507 AAATGTGAATGTTCAAAAGGAATGTAA 57.170 25.926 0.00 0.00 39.21 2.41
4830 7284 9.829507 AAAATGTGAATGTTCAAAAGGAATGTA 57.170 25.926 0.00 0.00 39.21 2.29
4831 7285 8.735692 AAAATGTGAATGTTCAAAAGGAATGT 57.264 26.923 0.00 0.00 39.21 2.71
4888 7342 2.693074 GGGTGCTCCAAGTCAAGAAAAA 59.307 45.455 7.20 0.00 35.00 1.94
4889 7343 2.306847 GGGTGCTCCAAGTCAAGAAAA 58.693 47.619 7.20 0.00 35.00 2.29
4890 7344 1.813862 CGGGTGCTCCAAGTCAAGAAA 60.814 52.381 7.20 0.00 34.36 2.52
4891 7345 0.250295 CGGGTGCTCCAAGTCAAGAA 60.250 55.000 7.20 0.00 34.36 2.52
4892 7346 1.371183 CGGGTGCTCCAAGTCAAGA 59.629 57.895 7.20 0.00 34.36 3.02
4893 7347 1.672356 CCGGGTGCTCCAAGTCAAG 60.672 63.158 7.20 0.00 34.36 3.02
4894 7348 2.111999 CTCCGGGTGCTCCAAGTCAA 62.112 60.000 0.00 0.00 34.36 3.18
4895 7349 2.525629 TCCGGGTGCTCCAAGTCA 60.526 61.111 0.00 0.00 34.36 3.41
4896 7350 1.255667 TACTCCGGGTGCTCCAAGTC 61.256 60.000 0.00 0.00 34.29 3.01
4897 7351 1.229082 TACTCCGGGTGCTCCAAGT 60.229 57.895 0.00 9.15 35.88 3.16
4898 7352 1.218316 GTACTCCGGGTGCTCCAAG 59.782 63.158 0.00 3.59 34.36 3.61
4899 7353 2.288025 GGTACTCCGGGTGCTCCAA 61.288 63.158 0.00 0.00 34.36 3.53
4900 7354 2.682494 GGTACTCCGGGTGCTCCA 60.682 66.667 0.00 0.00 34.36 3.86
4901 7355 3.468140 GGGTACTCCGGGTGCTCC 61.468 72.222 0.00 0.00 33.83 4.70
4902 7356 3.468140 GGGGTACTCCGGGTGCTC 61.468 72.222 0.00 1.57 36.01 4.26
4903 7357 2.246513 TATGGGGTACTCCGGGTGCT 62.247 60.000 7.43 0.00 36.01 4.40
4904 7358 1.755393 CTATGGGGTACTCCGGGTGC 61.755 65.000 7.43 1.67 36.01 5.01
4905 7359 0.105862 TCTATGGGGTACTCCGGGTG 60.106 60.000 7.43 0.00 36.01 4.61
4906 7360 0.865362 ATCTATGGGGTACTCCGGGT 59.135 55.000 7.43 0.32 36.01 5.28
4907 7361 1.267121 CATCTATGGGGTACTCCGGG 58.733 60.000 7.43 0.00 36.01 5.73
4908 7362 1.267121 CCATCTATGGGGTACTCCGG 58.733 60.000 7.43 0.00 44.31 5.14
4918 7372 5.584913 AGTATCAGGTACTCCCATCTATGG 58.415 45.833 1.72 1.72 39.46 2.74
4919 7373 7.546250 AAAGTATCAGGTACTCCCATCTATG 57.454 40.000 0.00 0.00 42.83 2.23
4920 7374 7.235812 GGAAAAGTATCAGGTACTCCCATCTAT 59.764 40.741 0.00 0.00 42.83 1.98
4921 7375 6.553852 GGAAAAGTATCAGGTACTCCCATCTA 59.446 42.308 0.00 0.00 42.83 1.98
4922 7376 5.367060 GGAAAAGTATCAGGTACTCCCATCT 59.633 44.000 0.00 0.00 42.83 2.90
4923 7377 5.454897 GGGAAAAGTATCAGGTACTCCCATC 60.455 48.000 10.58 0.94 42.83 3.51
4924 7378 4.412528 GGGAAAAGTATCAGGTACTCCCAT 59.587 45.833 10.58 0.00 42.83 4.00
4925 7379 3.778629 GGGAAAAGTATCAGGTACTCCCA 59.221 47.826 10.58 0.00 42.83 4.37
4926 7380 3.136077 GGGGAAAAGTATCAGGTACTCCC 59.864 52.174 7.80 7.80 42.83 4.30
4927 7381 4.038633 AGGGGAAAAGTATCAGGTACTCC 58.961 47.826 0.00 0.00 42.83 3.85
4928 7382 4.683671 GCAGGGGAAAAGTATCAGGTACTC 60.684 50.000 0.00 0.00 42.83 2.59
4929 7383 3.200165 GCAGGGGAAAAGTATCAGGTACT 59.800 47.826 0.00 0.00 45.56 2.73
4930 7384 3.054655 TGCAGGGGAAAAGTATCAGGTAC 60.055 47.826 0.00 0.00 0.00 3.34
4931 7385 3.186283 TGCAGGGGAAAAGTATCAGGTA 58.814 45.455 0.00 0.00 0.00 3.08
4932 7386 1.992557 TGCAGGGGAAAAGTATCAGGT 59.007 47.619 0.00 0.00 0.00 4.00
4933 7387 2.806945 TGCAGGGGAAAAGTATCAGG 57.193 50.000 0.00 0.00 0.00 3.86
4934 7388 5.006386 GGATATGCAGGGGAAAAGTATCAG 58.994 45.833 0.00 0.00 0.00 2.90
4935 7389 4.202567 GGGATATGCAGGGGAAAAGTATCA 60.203 45.833 0.00 0.00 0.00 2.15
4936 7390 4.202567 TGGGATATGCAGGGGAAAAGTATC 60.203 45.833 0.00 0.00 0.00 2.24
4937 7391 3.726859 TGGGATATGCAGGGGAAAAGTAT 59.273 43.478 0.00 0.00 0.00 2.12
4938 7392 3.127250 TGGGATATGCAGGGGAAAAGTA 58.873 45.455 0.00 0.00 0.00 2.24
4939 7393 1.929494 TGGGATATGCAGGGGAAAAGT 59.071 47.619 0.00 0.00 0.00 2.66
4940 7394 2.754012 TGGGATATGCAGGGGAAAAG 57.246 50.000 0.00 0.00 0.00 2.27
4941 7395 4.264352 GGATATGGGATATGCAGGGGAAAA 60.264 45.833 0.00 0.00 34.19 2.29
4942 7396 3.269381 GGATATGGGATATGCAGGGGAAA 59.731 47.826 0.00 0.00 34.19 3.13
4943 7397 2.852449 GGATATGGGATATGCAGGGGAA 59.148 50.000 0.00 0.00 34.19 3.97
4944 7398 2.226118 TGGATATGGGATATGCAGGGGA 60.226 50.000 0.00 0.00 38.44 4.81
4945 7399 2.207988 TGGATATGGGATATGCAGGGG 58.792 52.381 0.00 0.00 38.44 4.79
4946 7400 3.460712 TGATGGATATGGGATATGCAGGG 59.539 47.826 0.00 0.00 44.89 4.45
4947 7401 4.458397 GTGATGGATATGGGATATGCAGG 58.542 47.826 0.00 0.00 44.89 4.85
4948 7402 4.124970 CGTGATGGATATGGGATATGCAG 58.875 47.826 0.00 0.00 44.89 4.41
4949 7403 3.774216 TCGTGATGGATATGGGATATGCA 59.226 43.478 0.00 0.00 45.58 3.96
4950 7404 4.406648 TCGTGATGGATATGGGATATGC 57.593 45.455 0.00 0.00 34.55 3.14
4969 7423 2.286418 GGCCATTAATTGACGCTCTTCG 60.286 50.000 0.00 0.00 45.38 3.79
5004 7458 1.001624 GATTTGCCGCATTTTGGAGC 58.998 50.000 0.00 0.00 0.00 4.70
5005 7459 1.643880 GGATTTGCCGCATTTTGGAG 58.356 50.000 0.00 0.00 0.00 3.86
5006 7460 0.248843 GGGATTTGCCGCATTTTGGA 59.751 50.000 0.00 0.00 37.63 3.53
5007 7461 0.036577 TGGGATTTGCCGCATTTTGG 60.037 50.000 0.00 0.00 37.63 3.28
5008 7462 1.077915 GTGGGATTTGCCGCATTTTG 58.922 50.000 0.00 0.00 37.63 2.44
5009 7463 0.036483 GGTGGGATTTGCCGCATTTT 60.036 50.000 4.02 0.00 37.63 1.82
5010 7464 1.596408 GGTGGGATTTGCCGCATTT 59.404 52.632 4.02 0.00 37.63 2.32
5011 7465 2.358372 GGGTGGGATTTGCCGCATT 61.358 57.895 4.02 0.00 37.63 3.56
5012 7466 2.759560 GGGTGGGATTTGCCGCAT 60.760 61.111 4.02 0.00 37.63 4.73
5013 7467 3.936772 GAGGGTGGGATTTGCCGCA 62.937 63.158 4.02 0.00 37.63 5.69
5014 7468 3.140814 GAGGGTGGGATTTGCCGC 61.141 66.667 0.00 0.00 37.63 6.53
5015 7469 0.684153 AATGAGGGTGGGATTTGCCG 60.684 55.000 0.00 0.00 37.63 5.69
5016 7470 1.482182 GAAATGAGGGTGGGATTTGCC 59.518 52.381 0.00 0.00 0.00 4.52
5017 7471 1.482182 GGAAATGAGGGTGGGATTTGC 59.518 52.381 0.00 0.00 0.00 3.68
5018 7472 2.110578 GGGAAATGAGGGTGGGATTTG 58.889 52.381 0.00 0.00 0.00 2.32
5019 7473 1.721691 TGGGAAATGAGGGTGGGATTT 59.278 47.619 0.00 0.00 0.00 2.17
5020 7474 1.007118 GTGGGAAATGAGGGTGGGATT 59.993 52.381 0.00 0.00 0.00 3.01
5021 7475 0.631212 GTGGGAAATGAGGGTGGGAT 59.369 55.000 0.00 0.00 0.00 3.85
5022 7476 0.477597 AGTGGGAAATGAGGGTGGGA 60.478 55.000 0.00 0.00 0.00 4.37
5023 7477 0.034089 GAGTGGGAAATGAGGGTGGG 60.034 60.000 0.00 0.00 0.00 4.61
5024 7478 0.392998 CGAGTGGGAAATGAGGGTGG 60.393 60.000 0.00 0.00 0.00 4.61
5025 7479 0.613260 TCGAGTGGGAAATGAGGGTG 59.387 55.000 0.00 0.00 0.00 4.61
5026 7480 0.905357 CTCGAGTGGGAAATGAGGGT 59.095 55.000 3.62 0.00 0.00 4.34
5027 7481 0.462759 GCTCGAGTGGGAAATGAGGG 60.463 60.000 15.13 0.00 0.00 4.30
5028 7482 0.250234 TGCTCGAGTGGGAAATGAGG 59.750 55.000 15.13 0.00 0.00 3.86
5058 7512 1.273688 TCGTGTGCGAACAATATCCG 58.726 50.000 0.00 0.00 44.92 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.