Multiple sequence alignment - TraesCS3D01G190200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G190200 chr3D 100.000 6203 0 0 1 6203 178538067 178531865 0.000000e+00 11455.0
1 TraesCS3D01G190200 chr3D 96.214 449 17 0 1403 1851 232923074 232923522 0.000000e+00 736.0
2 TraesCS3D01G190200 chr3D 95.142 247 9 2 1942 2186 232923922 232924167 2.710000e-103 387.0
3 TraesCS3D01G190200 chr3D 94.776 134 6 1 2254 2386 146194913 146195046 2.270000e-49 207.0
4 TraesCS3D01G190200 chr3D 98.901 91 1 0 1852 1942 232923784 232923874 4.980000e-36 163.0
5 TraesCS3D01G190200 chr3D 100.000 58 0 0 2200 2257 178535929 178535872 2.360000e-19 108.0
6 TraesCS3D01G190200 chr3B 96.688 2234 48 10 2372 4583 256786831 256784602 0.000000e+00 3692.0
7 TraesCS3D01G190200 chr3B 92.111 1369 45 16 4854 6203 256784268 256782944 0.000000e+00 1871.0
8 TraesCS3D01G190200 chr3B 94.641 1213 34 10 180 1387 256788006 256786820 0.000000e+00 1851.0
9 TraesCS3D01G190200 chr3B 94.194 465 27 0 1387 1851 264980874 264981338 0.000000e+00 710.0
10 TraesCS3D01G190200 chr3B 93.452 168 8 1 4581 4745 256784568 256784401 4.800000e-61 246.0
11 TraesCS3D01G190200 chr3B 94.776 134 7 0 2254 2387 86502303 86502436 6.300000e-50 209.0
12 TraesCS3D01G190200 chr3B 100.000 45 0 0 4773 4817 256784311 256784267 3.980000e-12 84.2
13 TraesCS3D01G190200 chr3B 100.000 34 0 0 1942 1975 264981730 264981763 5.190000e-06 63.9
14 TraesCS3D01G190200 chr3B 100.000 31 0 0 4581 4611 256784475 256784445 2.420000e-04 58.4
15 TraesCS3D01G190200 chr3A 96.768 2228 44 7 2381 4583 219800785 219798561 0.000000e+00 3690.0
16 TraesCS3D01G190200 chr3A 92.302 1442 62 31 4771 6199 219798274 219796869 0.000000e+00 2002.0
17 TraesCS3D01G190200 chr3A 94.857 1225 31 7 167 1387 219801978 219800782 0.000000e+00 1884.0
18 TraesCS3D01G190200 chr3A 92.857 168 9 1 4581 4745 219798529 219798362 2.230000e-59 241.0
19 TraesCS3D01G190200 chr3A 96.552 58 2 0 2200 2257 711963494 711963551 5.120000e-16 97.1
20 TraesCS3D01G190200 chr3A 92.157 51 2 1 1374 1422 265542796 265542846 3.100000e-08 71.3
21 TraesCS3D01G190200 chr3A 90.385 52 2 2 1375 1425 459070662 459070711 1.440000e-06 65.8
22 TraesCS3D01G190200 chr3A 100.000 31 0 0 4581 4611 219798436 219798406 2.420000e-04 58.4
23 TraesCS3D01G190200 chr1B 93.360 2214 132 8 2381 4583 622187077 622184868 0.000000e+00 3260.0
24 TraesCS3D01G190200 chr1B 86.458 2208 261 24 2390 4579 585882356 585884543 0.000000e+00 2386.0
25 TraesCS3D01G190200 chr1B 87.818 747 75 10 4771 5507 622184686 622183946 0.000000e+00 861.0
26 TraesCS3D01G190200 chr1B 86.728 324 33 8 944 1257 622187556 622187233 9.890000e-93 351.0
27 TraesCS3D01G190200 chr1B 85.034 294 32 6 4987 5270 585884753 585885044 7.870000e-74 289.0
28 TraesCS3D01G190200 chr1B 96.850 127 3 1 2261 2386 136010911 136011037 1.750000e-50 211.0
29 TraesCS3D01G190200 chr1A 93.264 2212 129 9 2381 4583 547255139 547257339 0.000000e+00 3241.0
30 TraesCS3D01G190200 chr1A 87.882 1964 203 21 2628 4579 532103565 532105505 0.000000e+00 2276.0
31 TraesCS3D01G190200 chr1A 88.188 745 68 12 4771 5505 547257520 547258254 0.000000e+00 870.0
32 TraesCS3D01G190200 chr1A 87.346 324 31 7 944 1257 547254489 547254812 4.570000e-96 363.0
33 TraesCS3D01G190200 chr1A 85.324 293 33 5 4987 5270 532105705 532105996 1.690000e-75 294.0
34 TraesCS3D01G190200 chr1A 89.781 137 14 0 1010 1146 532102433 532102569 6.390000e-40 176.0
35 TraesCS3D01G190200 chr1A 98.276 58 1 0 2200 2257 100367129 100367186 1.100000e-17 102.0
36 TraesCS3D01G190200 chr1D 92.893 2209 141 9 2387 4583 452342105 452344309 0.000000e+00 3195.0
37 TraesCS3D01G190200 chr1D 86.378 2217 258 28 2390 4579 433516610 433518809 0.000000e+00 2381.0
38 TraesCS3D01G190200 chr1D 88.576 674 57 10 4840 5505 452344727 452345388 0.000000e+00 800.0
39 TraesCS3D01G190200 chr1D 96.214 449 17 0 1403 1851 288786069 288785621 0.000000e+00 736.0
40 TraesCS3D01G190200 chr1D 97.143 245 6 1 1942 2186 288785221 288784978 4.470000e-111 412.0
41 TraesCS3D01G190200 chr1D 95.816 239 5 3 1952 2186 149047133 149046896 1.260000e-101 381.0
42 TraesCS3D01G190200 chr1D 91.743 218 18 0 944 1161 452341597 452341814 2.810000e-78 303.0
43 TraesCS3D01G190200 chr1D 85.616 292 34 3 4987 5270 433519198 433519489 3.630000e-77 300.0
44 TraesCS3D01G190200 chr1D 97.802 91 2 0 1852 1942 288785359 288785269 2.310000e-34 158.0
45 TraesCS3D01G190200 chr1D 94.624 93 3 1 1852 1942 149047281 149047189 6.480000e-30 143.0
46 TraesCS3D01G190200 chr1D 100.000 48 0 0 2200 2247 149046943 149046896 8.560000e-14 89.8
47 TraesCS3D01G190200 chr1D 100.000 48 0 0 2200 2247 288785025 288784978 8.560000e-14 89.8
48 TraesCS3D01G190200 chr5D 96.218 476 15 2 1374 1849 526117530 526118002 0.000000e+00 776.0
49 TraesCS3D01G190200 chr5D 96.437 449 16 0 1403 1851 551602196 551601748 0.000000e+00 741.0
50 TraesCS3D01G190200 chr5D 93.536 263 9 3 1942 2199 526118405 526118664 9.750000e-103 385.0
51 TraesCS3D01G190200 chr5D 97.283 184 4 1 2003 2186 551601113 551600931 1.680000e-80 311.0
52 TraesCS3D01G190200 chr5D 96.850 127 3 1 2261 2386 488459938 488460064 1.750000e-50 211.0
53 TraesCS3D01G190200 chr5D 98.901 91 1 0 1852 1942 526118267 526118357 4.980000e-36 163.0
54 TraesCS3D01G190200 chr5D 97.802 91 2 0 1852 1942 551601486 551601396 2.310000e-34 158.0
55 TraesCS3D01G190200 chr5D 96.491 57 1 1 2200 2255 526118603 526118659 6.620000e-15 93.5
56 TraesCS3D01G190200 chr6A 95.054 465 23 0 1387 1851 240635595 240636059 0.000000e+00 732.0
57 TraesCS3D01G190200 chr6A 93.436 259 14 3 1942 2199 240636449 240636705 1.260000e-101 381.0
58 TraesCS3D01G190200 chr6A 96.739 92 3 0 1852 1943 240636320 240636411 2.990000e-33 154.0
59 TraesCS3D01G190200 chr6A 94.915 59 2 1 2200 2257 240636644 240636702 2.380000e-14 91.6
60 TraesCS3D01G190200 chr4D 95.991 449 18 0 1403 1851 35637779 35638227 0.000000e+00 730.0
61 TraesCS3D01G190200 chr4D 97.021 235 5 2 1952 2186 35638634 35638866 1.620000e-105 394.0
62 TraesCS3D01G190200 chr4D 97.802 91 2 0 1852 1942 35638488 35638578 2.310000e-34 158.0
63 TraesCS3D01G190200 chr7D 95.556 450 20 0 1403 1852 596550263 596549814 0.000000e+00 721.0
64 TraesCS3D01G190200 chr7D 94.958 238 5 3 1952 2186 596549470 596549237 3.530000e-97 366.0
65 TraesCS3D01G190200 chr7D 94.505 91 5 0 1852 1942 596549616 596549526 2.330000e-29 141.0
66 TraesCS3D01G190200 chr7B 94.194 465 26 1 1387 1851 363250666 363250203 0.000000e+00 708.0
67 TraesCS3D01G190200 chr7B 96.939 98 3 0 1852 1949 363249945 363249848 1.380000e-36 165.0
68 TraesCS3D01G190200 chr5B 88.623 501 46 6 2383 2874 239395808 239395310 3.200000e-167 599.0
69 TraesCS3D01G190200 chr5B 86.420 324 34 8 944 1257 239396290 239395967 4.600000e-91 346.0
70 TraesCS3D01G190200 chr2B 90.024 421 38 3 2383 2801 184124654 184124236 5.470000e-150 542.0
71 TraesCS3D01G190200 chr2B 85.388 219 22 8 1049 1257 184125033 184124815 1.050000e-52 219.0
72 TraesCS3D01G190200 chr2B 96.875 128 3 1 2260 2386 159974908 159975035 4.870000e-51 213.0
73 TraesCS3D01G190200 chr2B 91.447 152 9 4 2257 2405 373742979 373743129 8.150000e-49 206.0
74 TraesCS3D01G190200 chr4B 93.810 210 10 2 1943 2149 249764068 249763859 4.670000e-81 313.0
75 TraesCS3D01G190200 chr2A 85.000 320 33 11 953 1257 203826104 203825785 1.680000e-80 311.0
76 TraesCS3D01G190200 chr2A 98.347 121 2 0 2260 2380 177899014 177898894 4.870000e-51 213.0
77 TraesCS3D01G190200 chr2A 96.094 128 4 1 2261 2388 680761659 680761785 2.270000e-49 207.0
78 TraesCS3D01G190200 chr2A 98.276 58 1 0 2200 2257 178144884 178144941 1.100000e-17 102.0
79 TraesCS3D01G190200 chr2A 92.000 50 4 0 32 81 145442069 145442118 3.100000e-08 71.3
80 TraesCS3D01G190200 chrUn 98.347 121 2 0 2260 2380 13813592 13813472 4.870000e-51 213.0
81 TraesCS3D01G190200 chr4A 82.105 190 8 11 1945 2127 494053523 494053353 8.380000e-29 139.0
82 TraesCS3D01G190200 chr7A 98.276 58 1 0 2200 2257 731342078 731342135 1.100000e-17 102.0
83 TraesCS3D01G190200 chr2D 100.000 38 0 0 1385 1422 32774634 32774597 3.100000e-08 71.3
84 TraesCS3D01G190200 chr2D 92.000 50 3 1 1378 1426 301377935 301377886 1.120000e-07 69.4
85 TraesCS3D01G190200 chr2D 90.385 52 5 0 1376 1427 327331213 327331162 1.120000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G190200 chr3D 178531865 178538067 6202 True 5781.500000 11455 100.000000 1 6203 2 chr3D.!!$R1 6202
1 TraesCS3D01G190200 chr3D 232923074 232924167 1093 False 428.666667 736 96.752333 1403 2186 3 chr3D.!!$F2 783
2 TraesCS3D01G190200 chr3B 256782944 256788006 5062 True 1300.433333 3692 96.148667 180 6203 6 chr3B.!!$R1 6023
3 TraesCS3D01G190200 chr3B 264980874 264981763 889 False 386.950000 710 97.097000 1387 1975 2 chr3B.!!$F2 588
4 TraesCS3D01G190200 chr3A 219796869 219801978 5109 True 1575.080000 3690 95.356800 167 6199 5 chr3A.!!$R1 6032
5 TraesCS3D01G190200 chr1B 622183946 622187556 3610 True 1490.666667 3260 89.302000 944 5507 3 chr1B.!!$R1 4563
6 TraesCS3D01G190200 chr1B 585882356 585885044 2688 False 1337.500000 2386 85.746000 2390 5270 2 chr1B.!!$F2 2880
7 TraesCS3D01G190200 chr1A 547254489 547258254 3765 False 1491.333333 3241 89.599333 944 5505 3 chr1A.!!$F3 4561
8 TraesCS3D01G190200 chr1A 532102433 532105996 3563 False 915.333333 2276 87.662333 1010 5270 3 chr1A.!!$F2 4260
9 TraesCS3D01G190200 chr1D 452341597 452345388 3791 False 1432.666667 3195 91.070667 944 5505 3 chr1D.!!$F2 4561
10 TraesCS3D01G190200 chr1D 433516610 433519489 2879 False 1340.500000 2381 85.997000 2390 5270 2 chr1D.!!$F1 2880
11 TraesCS3D01G190200 chr1D 288784978 288786069 1091 True 348.950000 736 97.789750 1403 2247 4 chr1D.!!$R2 844
12 TraesCS3D01G190200 chr5D 551600931 551602196 1265 True 403.333333 741 97.174000 1403 2186 3 chr5D.!!$R1 783
13 TraesCS3D01G190200 chr5D 526117530 526118664 1134 False 354.375000 776 96.286500 1374 2255 4 chr5D.!!$F2 881
14 TraesCS3D01G190200 chr6A 240635595 240636705 1110 False 339.650000 732 95.036000 1387 2257 4 chr6A.!!$F1 870
15 TraesCS3D01G190200 chr4D 35637779 35638866 1087 False 427.333333 730 96.938000 1403 2186 3 chr4D.!!$F1 783
16 TraesCS3D01G190200 chr7D 596549237 596550263 1026 True 409.333333 721 95.006333 1403 2186 3 chr7D.!!$R1 783
17 TraesCS3D01G190200 chr7B 363249848 363250666 818 True 436.500000 708 95.566500 1387 1949 2 chr7B.!!$R1 562
18 TraesCS3D01G190200 chr5B 239395310 239396290 980 True 472.500000 599 87.521500 944 2874 2 chr5B.!!$R1 1930
19 TraesCS3D01G190200 chr2B 184124236 184125033 797 True 380.500000 542 87.706000 1049 2801 2 chr2B.!!$R1 1752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.041312 TTCAAGCGTTTTCAGCGAGC 60.041 50.0 0.00 0.0 40.04 5.03 F
668 670 0.376152 CTGTTGCTCATGCGGTGATC 59.624 55.0 0.00 0.0 43.34 2.92 F
2233 2985 0.560688 TTTTGTGGCCTCCCTTCCTT 59.439 50.0 3.32 0.0 0.00 3.36 F
2360 3112 0.036306 GGTGAACCCACGGAGTCAAT 59.964 55.0 0.00 0.0 41.61 2.57 F
2362 3114 0.323629 TGAACCCACGGAGTCAATCC 59.676 55.0 0.00 0.0 41.61 3.01 F
4059 5378 2.507407 TCCTATTTGTGAAGGGTGCC 57.493 50.0 0.00 0.0 33.40 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1431 1688 1.888512 TGGGTCAGTAGGAACGTGTAC 59.111 52.381 0.0 0.0 32.36 2.90 R
2341 3093 0.036306 ATTGACTCCGTGGGTTCACC 59.964 55.000 0.0 0.0 40.65 4.02 R
3585 4893 0.906775 GGGGATCAGGGTTACAACGA 59.093 55.000 0.0 0.0 0.00 3.85 R
3591 4899 1.977854 CGATGATGGGGATCAGGGTTA 59.022 52.381 0.0 0.0 33.59 2.85 R
4703 6072 9.924650 GTATCTAACTAGTCCAAGTGAAAAAGA 57.075 33.333 0.0 0.0 0.00 2.52 R
5817 7532 0.036105 TAGGCGTCGGACACAGTAGA 60.036 55.000 9.1 0.0 0.00 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.951745 CGATCTCGTGCCGCACTC 60.952 66.667 20.87 10.67 31.34 3.51
34 35 2.492090 GATCTCGTGCCGCACTCT 59.508 61.111 20.87 3.10 31.34 3.24
35 36 1.875813 GATCTCGTGCCGCACTCTG 60.876 63.158 20.87 10.68 31.34 3.35
36 37 3.997064 ATCTCGTGCCGCACTCTGC 62.997 63.158 20.87 0.00 40.69 4.26
40 41 4.687215 GTGCCGCACTCTGCCTGA 62.687 66.667 16.51 0.00 41.12 3.86
41 42 4.687215 TGCCGCACTCTGCCTGAC 62.687 66.667 0.00 0.00 41.12 3.51
42 43 4.385405 GCCGCACTCTGCCTGACT 62.385 66.667 0.00 0.00 41.12 3.41
43 44 2.125753 CCGCACTCTGCCTGACTC 60.126 66.667 0.00 0.00 41.12 3.36
44 45 2.653115 CGCACTCTGCCTGACTCA 59.347 61.111 0.00 0.00 41.12 3.41
45 46 1.735920 CGCACTCTGCCTGACTCAC 60.736 63.158 0.00 0.00 41.12 3.51
46 47 1.368950 GCACTCTGCCTGACTCACA 59.631 57.895 0.00 0.00 37.42 3.58
47 48 0.250038 GCACTCTGCCTGACTCACAA 60.250 55.000 0.00 0.00 37.42 3.33
48 49 1.793258 CACTCTGCCTGACTCACAAG 58.207 55.000 0.00 0.00 0.00 3.16
49 50 1.342496 CACTCTGCCTGACTCACAAGA 59.658 52.381 0.00 0.00 0.00 3.02
50 51 2.042464 ACTCTGCCTGACTCACAAGAA 58.958 47.619 0.00 0.00 0.00 2.52
51 52 2.435805 ACTCTGCCTGACTCACAAGAAA 59.564 45.455 0.00 0.00 0.00 2.52
52 53 2.805099 CTCTGCCTGACTCACAAGAAAC 59.195 50.000 0.00 0.00 0.00 2.78
53 54 2.435805 TCTGCCTGACTCACAAGAAACT 59.564 45.455 0.00 0.00 0.00 2.66
54 55 2.547211 CTGCCTGACTCACAAGAAACTG 59.453 50.000 0.00 0.00 0.00 3.16
55 56 1.265365 GCCTGACTCACAAGAAACTGC 59.735 52.381 0.00 0.00 0.00 4.40
56 57 1.876156 CCTGACTCACAAGAAACTGCC 59.124 52.381 0.00 0.00 0.00 4.85
57 58 1.528586 CTGACTCACAAGAAACTGCCG 59.471 52.381 0.00 0.00 0.00 5.69
58 59 1.138069 TGACTCACAAGAAACTGCCGA 59.862 47.619 0.00 0.00 0.00 5.54
59 60 2.224281 TGACTCACAAGAAACTGCCGAT 60.224 45.455 0.00 0.00 0.00 4.18
60 61 2.808543 GACTCACAAGAAACTGCCGATT 59.191 45.455 0.00 0.00 0.00 3.34
61 62 2.808543 ACTCACAAGAAACTGCCGATTC 59.191 45.455 0.00 0.00 0.00 2.52
62 63 2.807967 CTCACAAGAAACTGCCGATTCA 59.192 45.455 1.26 0.00 0.00 2.57
63 64 3.210227 TCACAAGAAACTGCCGATTCAA 58.790 40.909 1.26 0.00 0.00 2.69
64 65 3.250762 TCACAAGAAACTGCCGATTCAAG 59.749 43.478 1.26 0.00 0.00 3.02
65 66 2.030805 ACAAGAAACTGCCGATTCAAGC 60.031 45.455 1.26 0.00 0.00 4.01
66 67 0.798776 AGAAACTGCCGATTCAAGCG 59.201 50.000 1.26 0.00 0.00 4.68
67 68 0.517316 GAAACTGCCGATTCAAGCGT 59.483 50.000 0.00 0.00 0.00 5.07
68 69 0.951558 AAACTGCCGATTCAAGCGTT 59.048 45.000 0.00 0.00 0.00 4.84
69 70 0.951558 AACTGCCGATTCAAGCGTTT 59.048 45.000 0.00 0.00 0.00 3.60
70 71 0.951558 ACTGCCGATTCAAGCGTTTT 59.048 45.000 0.00 0.00 0.00 2.43
71 72 1.069227 ACTGCCGATTCAAGCGTTTTC 60.069 47.619 0.00 0.00 0.00 2.29
72 73 0.947960 TGCCGATTCAAGCGTTTTCA 59.052 45.000 0.00 0.00 0.00 2.69
73 74 1.069296 TGCCGATTCAAGCGTTTTCAG 60.069 47.619 0.00 0.00 0.00 3.02
74 75 1.606606 CCGATTCAAGCGTTTTCAGC 58.393 50.000 0.00 0.00 0.00 4.26
75 76 1.241744 CGATTCAAGCGTTTTCAGCG 58.758 50.000 0.00 0.00 40.04 5.18
76 77 1.136363 CGATTCAAGCGTTTTCAGCGA 60.136 47.619 0.00 0.00 40.04 4.93
77 78 2.499896 GATTCAAGCGTTTTCAGCGAG 58.500 47.619 0.00 0.00 40.04 5.03
78 79 0.041312 TTCAAGCGTTTTCAGCGAGC 60.041 50.000 0.00 0.00 40.04 5.03
79 80 1.441016 CAAGCGTTTTCAGCGAGCC 60.441 57.895 0.00 0.00 40.04 4.70
80 81 1.891919 AAGCGTTTTCAGCGAGCCA 60.892 52.632 0.00 0.00 40.04 4.75
81 82 2.117941 AAGCGTTTTCAGCGAGCCAC 62.118 55.000 0.00 0.00 40.04 5.01
82 83 2.170985 CGTTTTCAGCGAGCCACG 59.829 61.111 0.00 0.00 45.66 4.94
83 84 2.594962 CGTTTTCAGCGAGCCACGT 61.595 57.895 3.09 0.00 44.60 4.49
84 85 1.647084 GTTTTCAGCGAGCCACGTT 59.353 52.632 0.00 0.00 44.60 3.99
85 86 0.384353 GTTTTCAGCGAGCCACGTTC 60.384 55.000 0.00 0.00 44.60 3.95
86 87 0.531974 TTTTCAGCGAGCCACGTTCT 60.532 50.000 0.00 0.00 44.60 3.01
87 88 1.221466 TTTCAGCGAGCCACGTTCTG 61.221 55.000 0.00 3.32 44.60 3.02
88 89 3.114616 CAGCGAGCCACGTTCTGG 61.115 66.667 0.00 0.00 44.60 3.86
89 90 3.616721 AGCGAGCCACGTTCTGGT 61.617 61.111 0.00 0.00 42.99 4.00
90 91 3.112709 GCGAGCCACGTTCTGGTC 61.113 66.667 0.00 0.00 42.99 4.02
91 92 2.651361 CGAGCCACGTTCTGGTCT 59.349 61.111 7.00 0.00 42.99 3.85
92 93 1.734477 CGAGCCACGTTCTGGTCTG 60.734 63.158 7.00 0.00 42.99 3.51
93 94 2.029844 GAGCCACGTTCTGGTCTGC 61.030 63.158 0.00 0.00 42.99 4.26
94 95 2.031163 GCCACGTTCTGGTCTGCT 59.969 61.111 0.00 0.00 42.99 4.24
95 96 1.598130 GCCACGTTCTGGTCTGCTT 60.598 57.895 0.00 0.00 42.99 3.91
96 97 1.166531 GCCACGTTCTGGTCTGCTTT 61.167 55.000 0.00 0.00 42.99 3.51
97 98 0.588252 CCACGTTCTGGTCTGCTTTG 59.412 55.000 0.00 0.00 34.90 2.77
98 99 1.581934 CACGTTCTGGTCTGCTTTGA 58.418 50.000 0.00 0.00 0.00 2.69
99 100 1.528586 CACGTTCTGGTCTGCTTTGAG 59.471 52.381 0.00 0.00 0.00 3.02
100 101 1.412710 ACGTTCTGGTCTGCTTTGAGA 59.587 47.619 0.00 0.00 0.00 3.27
101 102 2.158957 ACGTTCTGGTCTGCTTTGAGAA 60.159 45.455 0.00 0.00 0.00 2.87
102 103 2.872245 CGTTCTGGTCTGCTTTGAGAAA 59.128 45.455 0.00 0.00 0.00 2.52
103 104 3.303395 CGTTCTGGTCTGCTTTGAGAAAC 60.303 47.826 0.00 0.00 0.00 2.78
104 105 2.851195 TCTGGTCTGCTTTGAGAAACC 58.149 47.619 0.00 0.00 0.00 3.27
105 106 2.172505 TCTGGTCTGCTTTGAGAAACCA 59.827 45.455 0.00 0.00 35.58 3.67
106 107 2.551459 CTGGTCTGCTTTGAGAAACCAG 59.449 50.000 5.07 5.07 45.43 4.00
107 108 1.882623 GGTCTGCTTTGAGAAACCAGG 59.117 52.381 0.00 0.00 0.00 4.45
108 109 1.268079 GTCTGCTTTGAGAAACCAGGC 59.732 52.381 0.00 0.00 0.00 4.85
109 110 1.133823 TCTGCTTTGAGAAACCAGGCA 60.134 47.619 0.00 0.00 0.00 4.75
110 111 1.682854 CTGCTTTGAGAAACCAGGCAA 59.317 47.619 0.00 0.00 0.00 4.52
111 112 2.298163 CTGCTTTGAGAAACCAGGCAAT 59.702 45.455 0.00 0.00 0.00 3.56
112 113 2.297033 TGCTTTGAGAAACCAGGCAATC 59.703 45.455 0.00 0.00 0.00 2.67
113 114 2.297033 GCTTTGAGAAACCAGGCAATCA 59.703 45.455 0.00 0.00 0.00 2.57
114 115 3.243839 GCTTTGAGAAACCAGGCAATCAA 60.244 43.478 0.00 0.00 0.00 2.57
115 116 4.740334 GCTTTGAGAAACCAGGCAATCAAA 60.740 41.667 8.60 8.60 35.85 2.69
116 117 4.320608 TTGAGAAACCAGGCAATCAAAC 57.679 40.909 0.00 0.00 0.00 2.93
117 118 3.295093 TGAGAAACCAGGCAATCAAACA 58.705 40.909 0.00 0.00 0.00 2.83
118 119 3.318839 TGAGAAACCAGGCAATCAAACAG 59.681 43.478 0.00 0.00 0.00 3.16
119 120 3.565307 AGAAACCAGGCAATCAAACAGA 58.435 40.909 0.00 0.00 0.00 3.41
120 121 3.319122 AGAAACCAGGCAATCAAACAGAC 59.681 43.478 0.00 0.00 0.00 3.51
121 122 2.664402 ACCAGGCAATCAAACAGACT 57.336 45.000 0.00 0.00 0.00 3.24
122 123 2.949447 ACCAGGCAATCAAACAGACTT 58.051 42.857 0.00 0.00 0.00 3.01
123 124 3.299503 ACCAGGCAATCAAACAGACTTT 58.700 40.909 0.00 0.00 0.00 2.66
124 125 3.706086 ACCAGGCAATCAAACAGACTTTT 59.294 39.130 0.00 0.00 0.00 2.27
125 126 4.162131 ACCAGGCAATCAAACAGACTTTTT 59.838 37.500 0.00 0.00 0.00 1.94
140 141 2.302478 TTTTTCTTTTTGCGCGGGC 58.698 47.368 18.81 18.81 40.52 6.13
158 159 3.708563 GGCAACCAAACACGCATATAT 57.291 42.857 0.00 0.00 0.00 0.86
159 160 3.371168 GGCAACCAAACACGCATATATG 58.629 45.455 8.45 8.45 0.00 1.78
160 161 3.181491 GGCAACCAAACACGCATATATGT 60.181 43.478 14.14 0.00 0.00 2.29
161 162 4.420168 GCAACCAAACACGCATATATGTT 58.580 39.130 14.14 0.00 40.76 2.71
162 163 4.265085 GCAACCAAACACGCATATATGTTG 59.735 41.667 14.14 13.17 39.00 3.33
163 164 4.630894 ACCAAACACGCATATATGTTGG 57.369 40.909 21.75 21.75 39.00 3.77
164 165 3.181491 ACCAAACACGCATATATGTTGGC 60.181 43.478 22.67 7.17 39.00 4.52
165 166 3.066621 CCAAACACGCATATATGTTGGCT 59.933 43.478 15.33 4.32 39.00 4.75
170 171 1.608109 CGCATATATGTTGGCTGCCAA 59.392 47.619 29.24 29.24 41.69 4.52
237 239 7.915923 CGATGCGGCTATAATAAATCTCTTCTA 59.084 37.037 0.00 0.00 0.00 2.10
247 249 7.826918 AATAAATCTCTTCTAGTCTACCGCT 57.173 36.000 0.00 0.00 0.00 5.52
262 264 2.586792 GCTGTGCCCTAGTCCCTG 59.413 66.667 0.00 0.00 0.00 4.45
408 410 8.911918 TTTTCAGGTATAAGCTTTACAGTCAA 57.088 30.769 3.20 0.00 0.00 3.18
431 433 7.659390 TCAACCAATAATTGCTTAAACCCAAAG 59.341 33.333 0.00 0.00 0.00 2.77
443 445 2.287977 ACCCAAAGCAGTTAACCTCC 57.712 50.000 0.88 0.00 0.00 4.30
445 447 2.091555 ACCCAAAGCAGTTAACCTCCAA 60.092 45.455 0.88 0.00 0.00 3.53
446 448 2.558359 CCCAAAGCAGTTAACCTCCAAG 59.442 50.000 0.88 0.00 0.00 3.61
464 466 1.975660 AGTTTTGTGCCGGTGTACAT 58.024 45.000 1.90 0.00 36.94 2.29
663 665 2.780643 CGACTGTTGCTCATGCGG 59.219 61.111 0.00 0.00 43.34 5.69
668 670 0.376152 CTGTTGCTCATGCGGTGATC 59.624 55.000 0.00 0.00 43.34 2.92
789 792 8.952278 TGTAACTGCTAATTCGGTTCATTTTAT 58.048 29.630 0.00 0.00 36.91 1.40
800 803 5.240623 TCGGTTCATTTTATCATGTATGGGC 59.759 40.000 0.00 0.00 0.00 5.36
944 953 7.443272 TGCGAATCATGACTTATTCATTGATCT 59.557 33.333 0.00 0.00 42.87 2.75
945 954 7.745155 GCGAATCATGACTTATTCATTGATCTG 59.255 37.037 0.00 0.00 42.87 2.90
1357 1614 7.010923 GGAACTGATGACTGTTAGAACATGATC 59.989 40.741 0.00 0.00 38.41 2.92
1391 1648 9.796120 CAAAACAGTTTTATTGGTGAAACTAGA 57.204 29.630 11.02 0.00 40.82 2.43
1431 1688 3.857010 GCAACGGGAGAAACAAATCCTTG 60.857 47.826 0.00 0.00 38.61 3.61
1439 1696 5.008316 GGAGAAACAAATCCTTGTACACGTT 59.992 40.000 0.00 0.00 45.25 3.99
1506 1763 2.687935 GTTGATGGTGGTCTTGTTGTGT 59.312 45.455 0.00 0.00 0.00 3.72
1584 1841 0.886563 GCATGCTGTTTTGAGAGCCT 59.113 50.000 11.37 0.00 34.04 4.58
1834 2091 8.934023 AAGTTTATGAATAAGTCCAGGTTCAA 57.066 30.769 0.00 0.00 34.62 2.69
2005 2750 3.400007 GCCTCGCGCCTCTTTAAG 58.600 61.111 0.00 0.00 0.00 1.85
2086 2833 2.158885 GGCCTCGCCTCTTTAAATCTCT 60.159 50.000 0.00 0.00 46.69 3.10
2194 2946 4.351131 AAATCTCGTTTAATTCGCCCAC 57.649 40.909 0.00 0.00 0.00 4.61
2206 2958 1.800681 CGCCCACGAATTTCCTTCC 59.199 57.895 0.00 0.00 43.93 3.46
2207 2959 0.676782 CGCCCACGAATTTCCTTCCT 60.677 55.000 0.00 0.00 43.93 3.36
2208 2960 0.811281 GCCCACGAATTTCCTTCCTG 59.189 55.000 0.00 0.00 0.00 3.86
2209 2961 1.613255 GCCCACGAATTTCCTTCCTGA 60.613 52.381 0.00 0.00 0.00 3.86
2210 2962 2.084546 CCCACGAATTTCCTTCCTGAC 58.915 52.381 0.00 0.00 0.00 3.51
2211 2963 2.290323 CCCACGAATTTCCTTCCTGACT 60.290 50.000 0.00 0.00 0.00 3.41
2212 2964 3.003480 CCACGAATTTCCTTCCTGACTC 58.997 50.000 0.00 0.00 0.00 3.36
2213 2965 3.557054 CCACGAATTTCCTTCCTGACTCA 60.557 47.826 0.00 0.00 0.00 3.41
2214 2966 4.256920 CACGAATTTCCTTCCTGACTCAT 58.743 43.478 0.00 0.00 0.00 2.90
2215 2967 4.697352 CACGAATTTCCTTCCTGACTCATT 59.303 41.667 0.00 0.00 0.00 2.57
2216 2968 5.182001 CACGAATTTCCTTCCTGACTCATTT 59.818 40.000 0.00 0.00 0.00 2.32
2217 2969 5.770162 ACGAATTTCCTTCCTGACTCATTTT 59.230 36.000 0.00 0.00 0.00 1.82
2218 2970 6.088824 CGAATTTCCTTCCTGACTCATTTTG 58.911 40.000 0.00 0.00 0.00 2.44
2219 2971 6.294176 CGAATTTCCTTCCTGACTCATTTTGT 60.294 38.462 0.00 0.00 0.00 2.83
2220 2972 5.772825 TTTCCTTCCTGACTCATTTTGTG 57.227 39.130 0.00 0.00 0.00 3.33
2221 2973 3.754965 TCCTTCCTGACTCATTTTGTGG 58.245 45.455 0.00 0.00 0.00 4.17
2222 2974 2.229784 CCTTCCTGACTCATTTTGTGGC 59.770 50.000 0.00 0.00 0.00 5.01
2223 2975 1.909700 TCCTGACTCATTTTGTGGCC 58.090 50.000 0.00 0.00 0.00 5.36
2224 2976 1.425066 TCCTGACTCATTTTGTGGCCT 59.575 47.619 3.32 0.00 0.00 5.19
2225 2977 1.815003 CCTGACTCATTTTGTGGCCTC 59.185 52.381 3.32 0.00 0.00 4.70
2226 2978 1.815003 CTGACTCATTTTGTGGCCTCC 59.185 52.381 3.32 0.00 0.00 4.30
2227 2979 1.177401 GACTCATTTTGTGGCCTCCC 58.823 55.000 3.32 0.00 0.00 4.30
2228 2980 0.779997 ACTCATTTTGTGGCCTCCCT 59.220 50.000 3.32 0.00 0.00 4.20
2229 2981 1.147817 ACTCATTTTGTGGCCTCCCTT 59.852 47.619 3.32 0.00 0.00 3.95
2230 2982 1.821136 CTCATTTTGTGGCCTCCCTTC 59.179 52.381 3.32 0.00 0.00 3.46
2231 2983 0.897621 CATTTTGTGGCCTCCCTTCC 59.102 55.000 3.32 0.00 0.00 3.46
2232 2984 0.786435 ATTTTGTGGCCTCCCTTCCT 59.214 50.000 3.32 0.00 0.00 3.36
2233 2985 0.560688 TTTTGTGGCCTCCCTTCCTT 59.439 50.000 3.32 0.00 0.00 3.36
2234 2986 1.451449 TTTGTGGCCTCCCTTCCTTA 58.549 50.000 3.32 0.00 0.00 2.69
2235 2987 1.451449 TTGTGGCCTCCCTTCCTTAA 58.549 50.000 3.32 0.00 0.00 1.85
2236 2988 1.451449 TGTGGCCTCCCTTCCTTAAA 58.549 50.000 3.32 0.00 0.00 1.52
2237 2989 2.000048 TGTGGCCTCCCTTCCTTAAAT 59.000 47.619 3.32 0.00 0.00 1.40
2238 2990 2.025321 TGTGGCCTCCCTTCCTTAAATC 60.025 50.000 3.32 0.00 0.00 2.17
2239 2991 2.242452 GTGGCCTCCCTTCCTTAAATCT 59.758 50.000 3.32 0.00 0.00 2.40
2240 2992 2.509964 TGGCCTCCCTTCCTTAAATCTC 59.490 50.000 3.32 0.00 0.00 2.75
2241 2993 2.485657 GGCCTCCCTTCCTTAAATCTCG 60.486 54.545 0.00 0.00 0.00 4.04
2242 2994 2.170817 GCCTCCCTTCCTTAAATCTCGT 59.829 50.000 0.00 0.00 0.00 4.18
2243 2995 3.370633 GCCTCCCTTCCTTAAATCTCGTT 60.371 47.826 0.00 0.00 0.00 3.85
2244 2996 4.844884 CCTCCCTTCCTTAAATCTCGTTT 58.155 43.478 0.00 0.00 0.00 3.60
2245 2997 5.628433 GCCTCCCTTCCTTAAATCTCGTTTA 60.628 44.000 0.00 0.00 0.00 2.01
2246 2998 6.412214 CCTCCCTTCCTTAAATCTCGTTTAA 58.588 40.000 0.00 0.00 39.36 1.52
2247 2999 7.054751 CCTCCCTTCCTTAAATCTCGTTTAAT 58.945 38.462 0.00 0.00 40.48 1.40
2248 3000 7.556635 CCTCCCTTCCTTAAATCTCGTTTAATT 59.443 37.037 0.00 0.00 40.48 1.40
2249 3001 8.502105 TCCCTTCCTTAAATCTCGTTTAATTC 57.498 34.615 0.00 0.00 40.48 2.17
2250 3002 7.279313 TCCCTTCCTTAAATCTCGTTTAATTCG 59.721 37.037 0.00 0.00 40.48 3.34
2251 3003 6.905609 CCTTCCTTAAATCTCGTTTAATTCGC 59.094 38.462 0.00 0.00 40.48 4.70
2252 3004 6.354039 TCCTTAAATCTCGTTTAATTCGCC 57.646 37.500 0.00 0.00 40.48 5.54
2253 3005 5.295045 TCCTTAAATCTCGTTTAATTCGCCC 59.705 40.000 0.00 0.00 40.48 6.13
2254 3006 5.065474 CCTTAAATCTCGTTTAATTCGCCCA 59.935 40.000 0.00 0.00 40.48 5.36
2255 3007 4.351131 AAATCTCGTTTAATTCGCCCAC 57.649 40.909 0.00 0.00 0.00 4.61
2256 3008 1.352114 TCTCGTTTAATTCGCCCACG 58.648 50.000 0.00 0.00 42.01 4.94
2257 3009 1.073177 CTCGTTTAATTCGCCCACGT 58.927 50.000 0.00 0.00 41.18 4.49
2258 3010 1.060122 CTCGTTTAATTCGCCCACGTC 59.940 52.381 0.00 0.00 41.18 4.34
2259 3011 0.791422 CGTTTAATTCGCCCACGTCA 59.209 50.000 0.00 0.00 41.18 4.35
2260 3012 1.194997 CGTTTAATTCGCCCACGTCAA 59.805 47.619 0.00 0.00 41.18 3.18
2261 3013 2.349627 CGTTTAATTCGCCCACGTCAAA 60.350 45.455 0.00 0.00 41.18 2.69
2262 3014 3.668491 CGTTTAATTCGCCCACGTCAAAT 60.668 43.478 0.00 0.00 41.18 2.32
2263 3015 4.435784 CGTTTAATTCGCCCACGTCAAATA 60.436 41.667 0.00 0.00 41.18 1.40
2264 3016 4.868450 TTAATTCGCCCACGTCAAATAG 57.132 40.909 0.00 0.00 41.18 1.73
2265 3017 2.396590 ATTCGCCCACGTCAAATAGT 57.603 45.000 0.00 0.00 41.18 2.12
2266 3018 3.530265 ATTCGCCCACGTCAAATAGTA 57.470 42.857 0.00 0.00 41.18 1.82
2267 3019 2.282701 TCGCCCACGTCAAATAGTAC 57.717 50.000 0.00 0.00 41.18 2.73
2268 3020 1.135024 TCGCCCACGTCAAATAGTACC 60.135 52.381 0.00 0.00 41.18 3.34
2269 3021 1.404449 CGCCCACGTCAAATAGTACCA 60.404 52.381 0.00 0.00 33.53 3.25
2270 3022 2.004733 GCCCACGTCAAATAGTACCAC 58.995 52.381 0.00 0.00 0.00 4.16
2271 3023 2.624636 CCCACGTCAAATAGTACCACC 58.375 52.381 0.00 0.00 0.00 4.61
2272 3024 2.235402 CCCACGTCAAATAGTACCACCT 59.765 50.000 0.00 0.00 0.00 4.00
2273 3025 3.518590 CCACGTCAAATAGTACCACCTC 58.481 50.000 0.00 0.00 0.00 3.85
2274 3026 3.176708 CACGTCAAATAGTACCACCTCG 58.823 50.000 0.00 0.00 0.00 4.63
2275 3027 2.165030 ACGTCAAATAGTACCACCTCGG 59.835 50.000 0.00 0.00 42.50 4.63
2276 3028 2.424601 CGTCAAATAGTACCACCTCGGA 59.575 50.000 0.00 0.00 38.63 4.55
2277 3029 3.067742 CGTCAAATAGTACCACCTCGGAT 59.932 47.826 0.00 0.00 38.63 4.18
2278 3030 4.369182 GTCAAATAGTACCACCTCGGATG 58.631 47.826 0.00 0.00 38.63 3.51
2279 3031 4.028131 TCAAATAGTACCACCTCGGATGT 58.972 43.478 0.00 0.00 38.63 3.06
2280 3032 5.068198 GTCAAATAGTACCACCTCGGATGTA 59.932 44.000 0.00 0.00 38.63 2.29
2281 3033 5.301045 TCAAATAGTACCACCTCGGATGTAG 59.699 44.000 0.00 0.00 38.63 2.74
2282 3034 4.719026 ATAGTACCACCTCGGATGTAGA 57.281 45.455 0.00 0.00 38.63 2.59
2283 3035 3.377253 AGTACCACCTCGGATGTAGAA 57.623 47.619 0.00 0.00 38.63 2.10
2284 3036 3.705051 AGTACCACCTCGGATGTAGAAA 58.295 45.455 0.00 0.00 38.63 2.52
2285 3037 4.091549 AGTACCACCTCGGATGTAGAAAA 58.908 43.478 0.00 0.00 38.63 2.29
2286 3038 4.715297 AGTACCACCTCGGATGTAGAAAAT 59.285 41.667 0.00 0.00 38.63 1.82
2287 3039 5.895534 AGTACCACCTCGGATGTAGAAAATA 59.104 40.000 0.00 0.00 38.63 1.40
2288 3040 5.687166 ACCACCTCGGATGTAGAAAATAA 57.313 39.130 0.00 0.00 38.63 1.40
2289 3041 6.248569 ACCACCTCGGATGTAGAAAATAAT 57.751 37.500 0.00 0.00 38.63 1.28
2290 3042 7.369551 ACCACCTCGGATGTAGAAAATAATA 57.630 36.000 0.00 0.00 38.63 0.98
2291 3043 7.974504 ACCACCTCGGATGTAGAAAATAATAT 58.025 34.615 0.00 0.00 38.63 1.28
2292 3044 9.096823 ACCACCTCGGATGTAGAAAATAATATA 57.903 33.333 0.00 0.00 38.63 0.86
2293 3045 9.587772 CCACCTCGGATGTAGAAAATAATATAG 57.412 37.037 0.00 0.00 36.56 1.31
2294 3046 9.587772 CACCTCGGATGTAGAAAATAATATAGG 57.412 37.037 0.00 0.00 0.00 2.57
2295 3047 9.322769 ACCTCGGATGTAGAAAATAATATAGGT 57.677 33.333 0.00 0.00 0.00 3.08
2296 3048 9.587772 CCTCGGATGTAGAAAATAATATAGGTG 57.412 37.037 0.00 0.00 0.00 4.00
2322 3074 7.406799 AAAAACTGAAAGCGTAAATTCATGG 57.593 32.000 0.00 0.00 37.60 3.66
2323 3075 4.701956 ACTGAAAGCGTAAATTCATGGG 57.298 40.909 0.00 0.00 37.60 4.00
2324 3076 4.331968 ACTGAAAGCGTAAATTCATGGGA 58.668 39.130 0.00 0.00 37.60 4.37
2325 3077 4.764823 ACTGAAAGCGTAAATTCATGGGAA 59.235 37.500 0.00 0.00 37.60 3.97
2326 3078 5.106157 ACTGAAAGCGTAAATTCATGGGAAG 60.106 40.000 0.00 0.00 37.60 3.46
2327 3079 5.007034 TGAAAGCGTAAATTCATGGGAAGA 58.993 37.500 0.00 0.00 36.25 2.87
2328 3080 5.475220 TGAAAGCGTAAATTCATGGGAAGAA 59.525 36.000 0.00 0.00 36.25 2.52
2329 3081 5.567138 AAGCGTAAATTCATGGGAAGAAG 57.433 39.130 0.00 0.00 36.25 2.85
2330 3082 3.378427 AGCGTAAATTCATGGGAAGAAGC 59.622 43.478 0.00 0.00 36.25 3.86
2331 3083 3.788797 GCGTAAATTCATGGGAAGAAGCG 60.789 47.826 0.00 0.00 36.25 4.68
2332 3084 3.374058 CGTAAATTCATGGGAAGAAGCGT 59.626 43.478 0.00 0.00 36.25 5.07
2333 3085 4.569162 CGTAAATTCATGGGAAGAAGCGTA 59.431 41.667 0.00 0.00 36.25 4.42
2334 3086 5.236478 CGTAAATTCATGGGAAGAAGCGTAT 59.764 40.000 0.00 0.00 36.25 3.06
2335 3087 6.238374 CGTAAATTCATGGGAAGAAGCGTATT 60.238 38.462 0.00 0.00 36.25 1.89
2336 3088 5.505173 AATTCATGGGAAGAAGCGTATTG 57.495 39.130 0.00 0.00 36.25 1.90
2337 3089 3.627395 TCATGGGAAGAAGCGTATTGT 57.373 42.857 0.00 0.00 0.00 2.71
2338 3090 3.270027 TCATGGGAAGAAGCGTATTGTG 58.730 45.455 0.00 0.00 0.00 3.33
2339 3091 3.055458 TCATGGGAAGAAGCGTATTGTGA 60.055 43.478 0.00 0.00 0.00 3.58
2340 3092 2.695359 TGGGAAGAAGCGTATTGTGAC 58.305 47.619 0.00 0.00 0.00 3.67
2341 3093 1.659098 GGGAAGAAGCGTATTGTGACG 59.341 52.381 0.00 0.00 45.70 4.35
2342 3094 1.659098 GGAAGAAGCGTATTGTGACGG 59.341 52.381 0.00 0.00 43.13 4.79
2347 3099 3.941194 GCGTATTGTGACGGTGAAC 57.059 52.632 0.00 0.00 43.13 3.18
2348 3100 0.441145 GCGTATTGTGACGGTGAACC 59.559 55.000 0.00 0.00 43.13 3.62
2349 3101 1.073177 CGTATTGTGACGGTGAACCC 58.927 55.000 0.00 0.00 39.19 4.11
2350 3102 1.605968 CGTATTGTGACGGTGAACCCA 60.606 52.381 0.00 0.00 39.19 4.51
2351 3103 1.802365 GTATTGTGACGGTGAACCCAC 59.198 52.381 2.84 2.84 42.46 4.61
2352 3104 0.882927 ATTGTGACGGTGAACCCACG 60.883 55.000 0.00 0.00 44.09 4.94
2353 3105 2.663852 GTGACGGTGAACCCACGG 60.664 66.667 0.00 0.00 44.09 4.94
2354 3106 2.838693 TGACGGTGAACCCACGGA 60.839 61.111 9.54 0.00 43.69 4.69
2355 3107 2.048503 GACGGTGAACCCACGGAG 60.049 66.667 9.54 0.00 43.69 4.63
2357 3109 2.048503 CGGTGAACCCACGGAGTC 60.049 66.667 0.00 0.00 41.61 3.36
2358 3110 2.863346 CGGTGAACCCACGGAGTCA 61.863 63.158 0.00 0.00 41.61 3.41
2359 3111 1.448497 GGTGAACCCACGGAGTCAA 59.552 57.895 0.00 0.00 41.61 3.18
2360 3112 0.036306 GGTGAACCCACGGAGTCAAT 59.964 55.000 0.00 0.00 41.61 2.57
2361 3113 1.439679 GTGAACCCACGGAGTCAATC 58.560 55.000 0.00 0.00 41.61 2.67
2362 3114 0.323629 TGAACCCACGGAGTCAATCC 59.676 55.000 0.00 0.00 41.61 3.01
2375 3127 6.619801 GGAGTCAATCCGTGCTTTATTATT 57.380 37.500 0.00 0.00 38.67 1.40
2376 3128 7.724305 GGAGTCAATCCGTGCTTTATTATTA 57.276 36.000 0.00 0.00 38.67 0.98
2377 3129 7.797819 GGAGTCAATCCGTGCTTTATTATTAG 58.202 38.462 0.00 0.00 38.67 1.73
2378 3130 7.095187 GGAGTCAATCCGTGCTTTATTATTAGG 60.095 40.741 0.00 0.00 38.67 2.69
2379 3131 6.710744 AGTCAATCCGTGCTTTATTATTAGGG 59.289 38.462 0.00 0.00 0.00 3.53
2380 3132 6.001460 TCAATCCGTGCTTTATTATTAGGGG 58.999 40.000 0.00 0.00 0.00 4.79
2381 3133 5.836024 ATCCGTGCTTTATTATTAGGGGA 57.164 39.130 0.00 0.00 0.00 4.81
2382 3134 5.633655 TCCGTGCTTTATTATTAGGGGAA 57.366 39.130 0.00 0.00 0.00 3.97
2383 3135 5.617252 TCCGTGCTTTATTATTAGGGGAAG 58.383 41.667 0.00 0.00 0.00 3.46
2384 3136 5.367352 TCCGTGCTTTATTATTAGGGGAAGA 59.633 40.000 0.00 0.00 0.00 2.87
2410 3162 7.675962 ATCGCAGTATTTTTGTTTGGTACTA 57.324 32.000 0.00 0.00 0.00 1.82
2586 3343 9.715121 ATGCTGTTTGTAATTGATTTTCAAGAT 57.285 25.926 0.00 0.00 40.05 2.40
2587 3344 9.195411 TGCTGTTTGTAATTGATTTTCAAGATC 57.805 29.630 0.00 0.00 40.05 2.75
2588 3345 9.195411 GCTGTTTGTAATTGATTTTCAAGATCA 57.805 29.630 0.00 0.00 40.05 2.92
2600 3357 9.761504 TGATTTTCAAGATCATCTCTCACTATC 57.238 33.333 0.00 0.00 31.03 2.08
2839 4107 3.644966 TTGGTCTCTCTCTCTCTCTCC 57.355 52.381 0.00 0.00 0.00 3.71
2841 4131 2.771943 TGGTCTCTCTCTCTCTCTCCTC 59.228 54.545 0.00 0.00 0.00 3.71
2907 4198 4.414182 TGGGAAAGTCTAAGGAGGTCAAAA 59.586 41.667 0.00 0.00 0.00 2.44
3330 4638 9.186323 GATGTAGTTACATACACATCAGATCAC 57.814 37.037 4.84 0.00 46.20 3.06
3552 4860 3.009723 CGGTAAACTTGACATGCAGGAT 58.990 45.455 4.84 0.00 0.00 3.24
3585 4893 7.589958 ATCACTTCGAGATCCTGTTTACTAT 57.410 36.000 0.00 0.00 0.00 2.12
3591 4899 5.356190 TCGAGATCCTGTTTACTATCGTTGT 59.644 40.000 0.00 0.00 0.00 3.32
4059 5378 2.507407 TCCTATTTGTGAAGGGTGCC 57.493 50.000 0.00 0.00 33.40 5.01
4623 5992 3.442977 ACTAGTTAGGTACTTCTGTGGCG 59.557 47.826 0.00 0.00 41.75 5.69
4681 6050 8.031864 GTGCTATCATTCTAGTAGTATGCATGT 58.968 37.037 10.16 0.00 0.00 3.21
4729 6098 9.924650 TCTTTTTCACTTGGACTAGTTAGATAC 57.075 33.333 0.00 0.00 0.00 2.24
4758 6189 5.841957 AGCACAGTTTGAGACTTTTGATT 57.158 34.783 0.00 0.00 36.10 2.57
4759 6190 6.212888 AGCACAGTTTGAGACTTTTGATTT 57.787 33.333 0.00 0.00 36.10 2.17
4760 6191 6.038356 AGCACAGTTTGAGACTTTTGATTTG 58.962 36.000 0.00 0.00 36.10 2.32
4761 6192 6.035843 GCACAGTTTGAGACTTTTGATTTGA 58.964 36.000 0.00 0.00 36.10 2.69
4764 6195 7.916977 CACAGTTTGAGACTTTTGATTTGATGA 59.083 33.333 0.00 0.00 36.10 2.92
4765 6196 8.469200 ACAGTTTGAGACTTTTGATTTGATGAA 58.531 29.630 0.00 0.00 36.10 2.57
4769 6200 8.821147 TTGAGACTTTTGATTTGATGAATTGG 57.179 30.769 0.00 0.00 0.00 3.16
4831 6286 6.808008 ACTAGTGTTGAAATCTGATGTTGG 57.192 37.500 0.00 0.00 0.00 3.77
4949 6618 7.981789 TCATTGAGTGGTATCTTCATGTACTTC 59.018 37.037 0.00 0.00 0.00 3.01
5349 7050 3.640029 TCGGACTTGGTTATCCAGTATCC 59.360 47.826 8.21 8.21 45.22 2.59
5364 7065 7.369551 TCCAGTATCCGTTATGTAATTTCCT 57.630 36.000 0.00 0.00 0.00 3.36
5405 7107 2.708861 TGCCAACTGATACCGGGATATT 59.291 45.455 6.32 0.00 0.00 1.28
5470 7173 4.071961 TCCAGATCCATGGTAAATGTCG 57.928 45.455 12.58 0.00 41.43 4.35
5519 7222 6.446318 TCTTGAAATACTGCCATGTTTCAAC 58.554 36.000 14.15 0.00 41.74 3.18
5545 7248 5.766670 TCAGTTGCTCTTCAATTTCATCTGT 59.233 36.000 0.00 0.00 36.99 3.41
5562 7265 2.878406 TCTGTACTGCAGTCCTTTTTGC 59.122 45.455 25.56 0.38 45.23 3.68
5586 7289 4.292784 GGCTGCACTTCAGTCCTC 57.707 61.111 0.50 0.00 44.66 3.71
5618 7321 1.798813 GTGTCGGATGAAACACCAGTC 59.201 52.381 0.00 0.00 39.87 3.51
5619 7322 1.270625 TGTCGGATGAAACACCAGTCC 60.271 52.381 0.00 0.00 0.00 3.85
5642 7346 3.838120 TCTGTCGTGTTCTTGAGCATAG 58.162 45.455 0.00 0.00 0.00 2.23
5708 7412 4.024893 GCCTTTTGAAGTTTGGCTTAAAGC 60.025 41.667 0.00 0.00 40.36 3.51
5795 7510 1.601166 AAGGTTTTGACGTGGGCTAC 58.399 50.000 0.00 0.00 0.00 3.58
5796 7511 0.763035 AGGTTTTGACGTGGGCTACT 59.237 50.000 0.00 0.00 0.00 2.57
5797 7512 1.154197 GGTTTTGACGTGGGCTACTC 58.846 55.000 0.00 0.00 0.00 2.59
5798 7513 1.270678 GGTTTTGACGTGGGCTACTCT 60.271 52.381 0.00 0.00 0.00 3.24
5799 7514 2.067013 GTTTTGACGTGGGCTACTCTC 58.933 52.381 0.00 0.00 0.00 3.20
5800 7515 1.629043 TTTGACGTGGGCTACTCTCT 58.371 50.000 0.00 0.00 0.00 3.10
5801 7516 2.502142 TTGACGTGGGCTACTCTCTA 57.498 50.000 0.00 0.00 0.00 2.43
5802 7517 2.039818 TGACGTGGGCTACTCTCTAG 57.960 55.000 0.00 0.00 0.00 2.43
5803 7518 1.558294 TGACGTGGGCTACTCTCTAGA 59.442 52.381 0.00 0.00 0.00 2.43
5822 7537 7.295196 TCTCTAGAGTGGGGTATATTGTCTACT 59.705 40.741 19.21 0.00 0.00 2.57
5831 7546 5.506982 GGGTATATTGTCTACTGTGTCCGAC 60.507 48.000 0.00 0.00 0.00 4.79
5835 7550 1.303074 TCTACTGTGTCCGACGCCT 60.303 57.895 9.57 0.00 0.00 5.52
5955 7673 6.339730 CCAAGGCAAAATTTAGCATACATGA 58.660 36.000 0.00 0.00 0.00 3.07
6053 7771 3.132289 CCTTCCGAGGTATTGTCAAGCTA 59.868 47.826 0.00 0.00 38.32 3.32
6065 7783 3.639538 TGTCAAGCTAACGAGAAGTCAC 58.360 45.455 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.687215 TCAGGCAGAGTGCGGCAC 62.687 66.667 25.00 25.00 46.21 5.01
24 25 4.687215 GTCAGGCAGAGTGCGGCA 62.687 66.667 0.00 0.00 46.21 5.69
25 26 4.385405 AGTCAGGCAGAGTGCGGC 62.385 66.667 0.00 0.00 46.21 6.53
26 27 2.125753 GAGTCAGGCAGAGTGCGG 60.126 66.667 0.00 0.00 46.21 5.69
27 28 1.735920 GTGAGTCAGGCAGAGTGCG 60.736 63.158 0.00 0.00 46.21 5.34
28 29 0.250038 TTGTGAGTCAGGCAGAGTGC 60.250 55.000 0.00 0.00 44.08 4.40
29 30 1.342496 TCTTGTGAGTCAGGCAGAGTG 59.658 52.381 0.00 0.00 0.00 3.51
30 31 1.709578 TCTTGTGAGTCAGGCAGAGT 58.290 50.000 0.00 0.00 0.00 3.24
31 32 2.805099 GTTTCTTGTGAGTCAGGCAGAG 59.195 50.000 0.00 0.00 0.00 3.35
32 33 2.435805 AGTTTCTTGTGAGTCAGGCAGA 59.564 45.455 0.00 0.00 0.00 4.26
33 34 2.547211 CAGTTTCTTGTGAGTCAGGCAG 59.453 50.000 0.00 0.00 0.00 4.85
34 35 2.564771 CAGTTTCTTGTGAGTCAGGCA 58.435 47.619 0.00 0.00 0.00 4.75
35 36 1.265365 GCAGTTTCTTGTGAGTCAGGC 59.735 52.381 0.00 0.00 0.00 4.85
36 37 1.876156 GGCAGTTTCTTGTGAGTCAGG 59.124 52.381 0.00 0.00 0.00 3.86
37 38 1.528586 CGGCAGTTTCTTGTGAGTCAG 59.471 52.381 0.00 0.00 0.00 3.51
38 39 1.138069 TCGGCAGTTTCTTGTGAGTCA 59.862 47.619 0.00 0.00 0.00 3.41
39 40 1.865865 TCGGCAGTTTCTTGTGAGTC 58.134 50.000 0.00 0.00 0.00 3.36
40 41 2.550830 ATCGGCAGTTTCTTGTGAGT 57.449 45.000 0.00 0.00 0.00 3.41
41 42 2.807967 TGAATCGGCAGTTTCTTGTGAG 59.192 45.455 8.74 0.00 0.00 3.51
42 43 2.844946 TGAATCGGCAGTTTCTTGTGA 58.155 42.857 8.74 0.00 0.00 3.58
43 44 3.558505 CTTGAATCGGCAGTTTCTTGTG 58.441 45.455 8.74 0.00 0.00 3.33
44 45 2.030805 GCTTGAATCGGCAGTTTCTTGT 60.031 45.455 8.74 0.00 0.00 3.16
45 46 2.589014 GCTTGAATCGGCAGTTTCTTG 58.411 47.619 8.74 3.69 0.00 3.02
46 47 1.197721 CGCTTGAATCGGCAGTTTCTT 59.802 47.619 8.74 0.00 0.00 2.52
47 48 0.798776 CGCTTGAATCGGCAGTTTCT 59.201 50.000 8.74 0.00 0.00 2.52
48 49 0.517316 ACGCTTGAATCGGCAGTTTC 59.483 50.000 1.21 1.21 0.00 2.78
49 50 0.951558 AACGCTTGAATCGGCAGTTT 59.048 45.000 0.00 0.00 0.00 2.66
50 51 0.951558 AAACGCTTGAATCGGCAGTT 59.048 45.000 0.00 2.23 0.00 3.16
51 52 0.951558 AAAACGCTTGAATCGGCAGT 59.048 45.000 0.00 0.00 0.00 4.40
52 53 1.069296 TGAAAACGCTTGAATCGGCAG 60.069 47.619 0.00 0.00 0.00 4.85
53 54 0.947960 TGAAAACGCTTGAATCGGCA 59.052 45.000 0.00 0.00 0.00 5.69
54 55 1.606606 CTGAAAACGCTTGAATCGGC 58.393 50.000 0.00 0.00 0.00 5.54
55 56 1.606606 GCTGAAAACGCTTGAATCGG 58.393 50.000 0.00 0.00 0.00 4.18
56 57 1.136363 TCGCTGAAAACGCTTGAATCG 60.136 47.619 0.00 0.00 0.00 3.34
57 58 2.499896 CTCGCTGAAAACGCTTGAATC 58.500 47.619 0.00 0.00 0.00 2.52
58 59 1.400242 GCTCGCTGAAAACGCTTGAAT 60.400 47.619 0.00 0.00 0.00 2.57
59 60 0.041312 GCTCGCTGAAAACGCTTGAA 60.041 50.000 0.00 0.00 0.00 2.69
60 61 1.569493 GCTCGCTGAAAACGCTTGA 59.431 52.632 0.00 0.00 0.00 3.02
61 62 1.441016 GGCTCGCTGAAAACGCTTG 60.441 57.895 0.00 0.00 0.00 4.01
62 63 1.891919 TGGCTCGCTGAAAACGCTT 60.892 52.632 0.00 0.00 0.00 4.68
63 64 2.280797 TGGCTCGCTGAAAACGCT 60.281 55.556 0.00 0.00 0.00 5.07
64 65 2.127232 GTGGCTCGCTGAAAACGC 60.127 61.111 0.00 0.00 0.00 4.84
65 66 2.101209 AACGTGGCTCGCTGAAAACG 62.101 55.000 9.11 0.00 44.19 3.60
66 67 0.384353 GAACGTGGCTCGCTGAAAAC 60.384 55.000 9.11 0.00 44.19 2.43
67 68 0.531974 AGAACGTGGCTCGCTGAAAA 60.532 50.000 9.11 0.00 44.19 2.29
68 69 1.069090 AGAACGTGGCTCGCTGAAA 59.931 52.632 9.11 0.00 44.19 2.69
69 70 1.664649 CAGAACGTGGCTCGCTGAA 60.665 57.895 9.11 0.00 44.19 3.02
70 71 2.049156 CAGAACGTGGCTCGCTGA 60.049 61.111 9.11 0.00 44.19 4.26
71 72 3.114616 CCAGAACGTGGCTCGCTG 61.115 66.667 9.11 8.96 40.39 5.18
79 80 1.528586 CTCAAAGCAGACCAGAACGTG 59.471 52.381 0.00 0.00 0.00 4.49
80 81 1.412710 TCTCAAAGCAGACCAGAACGT 59.587 47.619 0.00 0.00 0.00 3.99
81 82 2.154854 TCTCAAAGCAGACCAGAACG 57.845 50.000 0.00 0.00 0.00 3.95
82 83 3.003793 GGTTTCTCAAAGCAGACCAGAAC 59.996 47.826 0.00 0.00 38.68 3.01
83 84 3.214328 GGTTTCTCAAAGCAGACCAGAA 58.786 45.455 0.00 0.00 38.68 3.02
84 85 2.172505 TGGTTTCTCAAAGCAGACCAGA 59.827 45.455 0.00 0.00 43.27 3.86
85 86 2.575532 TGGTTTCTCAAAGCAGACCAG 58.424 47.619 0.00 0.00 43.27 4.00
86 87 2.727123 TGGTTTCTCAAAGCAGACCA 57.273 45.000 0.00 0.00 43.27 4.02
91 92 1.774110 TTGCCTGGTTTCTCAAAGCA 58.226 45.000 0.00 1.28 45.65 3.91
92 93 2.297033 TGATTGCCTGGTTTCTCAAAGC 59.703 45.455 0.00 0.00 39.26 3.51
93 94 4.589216 TTGATTGCCTGGTTTCTCAAAG 57.411 40.909 0.00 0.00 0.00 2.77
94 95 4.161189 TGTTTGATTGCCTGGTTTCTCAAA 59.839 37.500 9.96 9.96 32.04 2.69
95 96 3.703556 TGTTTGATTGCCTGGTTTCTCAA 59.296 39.130 0.00 0.00 0.00 3.02
96 97 3.295093 TGTTTGATTGCCTGGTTTCTCA 58.705 40.909 0.00 0.00 0.00 3.27
97 98 3.569701 TCTGTTTGATTGCCTGGTTTCTC 59.430 43.478 0.00 0.00 0.00 2.87
98 99 3.319122 GTCTGTTTGATTGCCTGGTTTCT 59.681 43.478 0.00 0.00 0.00 2.52
99 100 3.319122 AGTCTGTTTGATTGCCTGGTTTC 59.681 43.478 0.00 0.00 0.00 2.78
100 101 3.299503 AGTCTGTTTGATTGCCTGGTTT 58.700 40.909 0.00 0.00 0.00 3.27
101 102 2.949447 AGTCTGTTTGATTGCCTGGTT 58.051 42.857 0.00 0.00 0.00 3.67
102 103 2.664402 AGTCTGTTTGATTGCCTGGT 57.336 45.000 0.00 0.00 0.00 4.00
103 104 4.326504 AAAAGTCTGTTTGATTGCCTGG 57.673 40.909 0.00 0.00 0.00 4.45
122 123 0.460284 TGCCCGCGCAAAAAGAAAAA 60.460 45.000 8.75 0.00 43.74 1.94
123 124 1.141881 TGCCCGCGCAAAAAGAAAA 59.858 47.368 8.75 0.00 43.74 2.29
124 125 2.808315 TGCCCGCGCAAAAAGAAA 59.192 50.000 8.75 0.00 43.74 2.52
134 135 4.973360 CGTGTTTGGTTGCCCGCG 62.973 66.667 0.00 0.00 0.00 6.46
136 137 1.857318 TATGCGTGTTTGGTTGCCCG 61.857 55.000 0.00 0.00 0.00 6.13
137 138 0.530288 ATATGCGTGTTTGGTTGCCC 59.470 50.000 0.00 0.00 0.00 5.36
138 139 3.181491 ACATATATGCGTGTTTGGTTGCC 60.181 43.478 12.79 0.00 0.00 4.52
139 140 4.027572 ACATATATGCGTGTTTGGTTGC 57.972 40.909 12.79 0.00 0.00 4.17
140 141 4.797868 CCAACATATATGCGTGTTTGGTTG 59.202 41.667 17.80 10.23 36.48 3.77
141 142 4.676723 GCCAACATATATGCGTGTTTGGTT 60.677 41.667 23.03 4.48 36.48 3.67
142 143 3.181491 GCCAACATATATGCGTGTTTGGT 60.181 43.478 23.03 0.00 36.48 3.67
143 144 3.066621 AGCCAACATATATGCGTGTTTGG 59.933 43.478 20.19 20.19 36.48 3.28
144 145 4.037021 CAGCCAACATATATGCGTGTTTG 58.963 43.478 12.79 8.93 36.48 2.93
145 146 3.489059 GCAGCCAACATATATGCGTGTTT 60.489 43.478 12.79 0.00 36.48 2.83
146 147 2.033299 GCAGCCAACATATATGCGTGTT 59.967 45.455 12.79 0.00 39.00 3.32
147 148 1.603802 GCAGCCAACATATATGCGTGT 59.396 47.619 12.79 0.00 0.00 4.49
148 149 1.069022 GGCAGCCAACATATATGCGTG 60.069 52.381 12.79 10.70 37.76 5.34
149 150 1.238439 GGCAGCCAACATATATGCGT 58.762 50.000 12.79 0.00 37.76 5.24
150 151 1.237533 TGGCAGCCAACATATATGCG 58.762 50.000 13.33 4.33 37.76 4.73
196 197 2.656069 ATCGGGTCGGGTTGGACTG 61.656 63.158 0.00 0.00 37.12 3.51
237 239 1.000019 TAGGGCACAGCGGTAGACT 60.000 57.895 0.00 0.00 0.00 3.24
247 249 0.976073 GCTACAGGGACTAGGGCACA 60.976 60.000 0.00 0.00 36.02 4.57
290 292 2.781406 GAGGGGTCAGGAGGAGGT 59.219 66.667 0.00 0.00 0.00 3.85
408 410 5.937540 GCTTTGGGTTTAAGCAATTATTGGT 59.062 36.000 3.59 3.59 45.64 3.67
431 433 4.359706 CACAAAACTTGGAGGTTAACTGC 58.640 43.478 5.42 0.00 38.16 4.40
434 436 3.713288 GGCACAAAACTTGGAGGTTAAC 58.287 45.455 0.00 0.00 34.12 2.01
443 445 1.402259 TGTACACCGGCACAAAACTTG 59.598 47.619 0.00 0.00 0.00 3.16
445 447 1.877443 GATGTACACCGGCACAAAACT 59.123 47.619 0.00 0.00 0.00 2.66
446 448 1.068816 GGATGTACACCGGCACAAAAC 60.069 52.381 0.00 0.29 0.00 2.43
464 466 1.806461 GATCTAGATGGCGTGCCGGA 61.806 60.000 10.74 0.17 39.42 5.14
645 647 2.097160 CGCATGAGCAACAGTCGC 59.903 61.111 0.00 0.00 42.27 5.19
663 665 1.078759 CGCAACTCTCACGGGATCAC 61.079 60.000 0.00 0.00 0.00 3.06
668 670 2.022129 GTGACGCAACTCTCACGGG 61.022 63.158 0.00 0.00 0.00 5.28
789 792 4.166725 AGATTTCAGAAGGCCCATACATGA 59.833 41.667 0.00 0.00 0.00 3.07
800 803 3.683802 AGGTCAAGCAGATTTCAGAAGG 58.316 45.455 0.00 0.00 0.00 3.46
868 877 3.734902 GCAGAAAAGATGCATTAACCCCG 60.735 47.826 0.00 0.00 43.31 5.73
945 954 3.460103 CCAATGGCAGATAAATGTTGGC 58.540 45.455 0.00 0.00 37.84 4.52
976 985 0.185901 TCCCTTGCAAGCCAAAGAGT 59.814 50.000 21.43 0.00 31.94 3.24
1255 1338 6.116806 AGAGCTAATCTTCAGAGTCGACTAA 58.883 40.000 20.09 8.63 32.99 2.24
1357 1614 8.542132 CACCAATAAAACTGTTTTGATTGACAG 58.458 33.333 27.20 20.12 46.65 3.51
1431 1688 1.888512 TGGGTCAGTAGGAACGTGTAC 59.111 52.381 0.00 0.00 32.36 2.90
1439 1696 2.180946 ATGCAGATGGGTCAGTAGGA 57.819 50.000 0.00 0.00 0.00 2.94
1709 1966 6.045072 TGTATATGAACCGGTGTTTTCTCT 57.955 37.500 8.52 0.00 33.97 3.10
1825 2082 4.687483 GCTTCATGAAATGTTTGAACCTGG 59.313 41.667 9.88 0.00 46.80 4.45
1834 2091 7.966246 TTTGCTTTATGCTTCATGAAATGTT 57.034 28.000 9.88 0.00 43.58 2.71
2005 2750 3.019564 CAGGAAGGTGATGGATTTGGAC 58.980 50.000 0.00 0.00 0.00 4.02
2127 2878 5.759059 AGTCAGGAAGGAATTAATGCATGA 58.241 37.500 0.00 0.00 0.00 3.07
2194 2946 5.886960 AAATGAGTCAGGAAGGAAATTCG 57.113 39.130 0.00 0.00 38.95 3.34
2200 2952 3.754965 CCACAAAATGAGTCAGGAAGGA 58.245 45.455 0.00 0.00 0.00 3.36
2201 2953 2.229784 GCCACAAAATGAGTCAGGAAGG 59.770 50.000 0.00 0.00 0.00 3.46
2202 2954 2.229784 GGCCACAAAATGAGTCAGGAAG 59.770 50.000 0.00 0.00 0.00 3.46
2203 2955 2.158475 AGGCCACAAAATGAGTCAGGAA 60.158 45.455 5.01 0.00 0.00 3.36
2204 2956 1.425066 AGGCCACAAAATGAGTCAGGA 59.575 47.619 5.01 0.00 0.00 3.86
2205 2957 1.815003 GAGGCCACAAAATGAGTCAGG 59.185 52.381 5.01 0.00 0.00 3.86
2206 2958 1.815003 GGAGGCCACAAAATGAGTCAG 59.185 52.381 5.01 0.00 0.00 3.51
2207 2959 1.547675 GGGAGGCCACAAAATGAGTCA 60.548 52.381 5.01 0.00 0.00 3.41
2208 2960 1.177401 GGGAGGCCACAAAATGAGTC 58.823 55.000 5.01 0.00 0.00 3.36
2209 2961 0.779997 AGGGAGGCCACAAAATGAGT 59.220 50.000 5.01 0.00 0.00 3.41
2210 2962 1.821136 GAAGGGAGGCCACAAAATGAG 59.179 52.381 5.01 0.00 0.00 2.90
2211 2963 1.549950 GGAAGGGAGGCCACAAAATGA 60.550 52.381 5.01 0.00 0.00 2.57
2212 2964 0.897621 GGAAGGGAGGCCACAAAATG 59.102 55.000 5.01 0.00 0.00 2.32
2213 2965 0.786435 AGGAAGGGAGGCCACAAAAT 59.214 50.000 5.01 0.00 0.00 1.82
2214 2966 0.560688 AAGGAAGGGAGGCCACAAAA 59.439 50.000 5.01 0.00 0.00 2.44
2215 2967 1.451449 TAAGGAAGGGAGGCCACAAA 58.549 50.000 5.01 0.00 0.00 2.83
2216 2968 1.451449 TTAAGGAAGGGAGGCCACAA 58.549 50.000 5.01 0.00 0.00 3.33
2217 2969 1.451449 TTTAAGGAAGGGAGGCCACA 58.549 50.000 5.01 0.00 0.00 4.17
2218 2970 2.242452 AGATTTAAGGAAGGGAGGCCAC 59.758 50.000 5.01 0.00 0.00 5.01
2219 2971 2.509964 GAGATTTAAGGAAGGGAGGCCA 59.490 50.000 5.01 0.00 0.00 5.36
2220 2972 2.485657 CGAGATTTAAGGAAGGGAGGCC 60.486 54.545 0.00 0.00 0.00 5.19
2221 2973 2.170817 ACGAGATTTAAGGAAGGGAGGC 59.829 50.000 0.00 0.00 0.00 4.70
2222 2974 4.489306 AACGAGATTTAAGGAAGGGAGG 57.511 45.455 0.00 0.00 0.00 4.30
2223 2975 8.507524 AATTAAACGAGATTTAAGGAAGGGAG 57.492 34.615 0.00 0.00 44.15 4.30
2224 2976 7.279313 CGAATTAAACGAGATTTAAGGAAGGGA 59.721 37.037 0.00 0.00 44.15 4.20
2225 2977 7.407337 CGAATTAAACGAGATTTAAGGAAGGG 58.593 38.462 0.00 0.00 44.15 3.95
2226 2978 6.905609 GCGAATTAAACGAGATTTAAGGAAGG 59.094 38.462 9.09 0.00 44.15 3.46
2227 2979 6.905609 GGCGAATTAAACGAGATTTAAGGAAG 59.094 38.462 9.09 0.00 44.15 3.46
2228 2980 6.183360 GGGCGAATTAAACGAGATTTAAGGAA 60.183 38.462 9.09 0.00 44.15 3.36
2229 2981 5.295045 GGGCGAATTAAACGAGATTTAAGGA 59.705 40.000 9.09 0.00 44.15 3.36
2230 2982 5.065474 TGGGCGAATTAAACGAGATTTAAGG 59.935 40.000 9.09 0.00 44.15 2.69
2231 2983 5.963586 GTGGGCGAATTAAACGAGATTTAAG 59.036 40.000 9.09 0.00 44.15 1.85
2232 2984 5.446206 CGTGGGCGAATTAAACGAGATTTAA 60.446 40.000 9.09 0.00 42.29 1.52
2233 2985 4.033129 CGTGGGCGAATTAAACGAGATTTA 59.967 41.667 9.09 0.00 41.33 1.40
2234 2986 3.181514 CGTGGGCGAATTAAACGAGATTT 60.182 43.478 9.09 0.00 41.33 2.17
2235 2987 2.350498 CGTGGGCGAATTAAACGAGATT 59.650 45.455 9.09 0.00 41.33 2.40
2236 2988 1.931172 CGTGGGCGAATTAAACGAGAT 59.069 47.619 9.09 0.00 41.33 2.75
2237 2989 1.337074 ACGTGGGCGAATTAAACGAGA 60.337 47.619 9.09 0.00 42.00 4.04
2238 2990 1.060122 GACGTGGGCGAATTAAACGAG 59.940 52.381 0.00 0.00 42.00 4.18
2239 2991 1.070038 GACGTGGGCGAATTAAACGA 58.930 50.000 0.00 0.00 42.00 3.85
2240 2992 0.791422 TGACGTGGGCGAATTAAACG 59.209 50.000 0.00 0.00 42.00 3.60
2241 2993 2.973419 TTGACGTGGGCGAATTAAAC 57.027 45.000 0.00 0.00 42.00 2.01
2242 2994 4.696402 ACTATTTGACGTGGGCGAATTAAA 59.304 37.500 0.00 0.00 42.00 1.52
2243 2995 4.255301 ACTATTTGACGTGGGCGAATTAA 58.745 39.130 0.00 0.00 42.00 1.40
2244 2996 3.864243 ACTATTTGACGTGGGCGAATTA 58.136 40.909 0.00 0.00 42.00 1.40
2245 2997 2.706890 ACTATTTGACGTGGGCGAATT 58.293 42.857 0.00 0.00 42.00 2.17
2246 2998 2.396590 ACTATTTGACGTGGGCGAAT 57.603 45.000 0.00 0.00 42.00 3.34
2247 2999 2.609350 GTACTATTTGACGTGGGCGAA 58.391 47.619 0.00 0.00 42.00 4.70
2248 3000 1.135024 GGTACTATTTGACGTGGGCGA 60.135 52.381 0.00 0.00 42.00 5.54
2249 3001 1.283736 GGTACTATTTGACGTGGGCG 58.716 55.000 0.00 0.00 44.93 6.13
2250 3002 2.004733 GTGGTACTATTTGACGTGGGC 58.995 52.381 0.00 0.00 0.00 5.36
2251 3003 2.235402 AGGTGGTACTATTTGACGTGGG 59.765 50.000 0.00 0.00 0.00 4.61
2252 3004 3.518590 GAGGTGGTACTATTTGACGTGG 58.481 50.000 0.00 0.00 0.00 4.94
2253 3005 3.176708 CGAGGTGGTACTATTTGACGTG 58.823 50.000 0.00 0.00 0.00 4.49
2254 3006 2.165030 CCGAGGTGGTACTATTTGACGT 59.835 50.000 0.00 0.00 0.00 4.34
2255 3007 2.424601 TCCGAGGTGGTACTATTTGACG 59.575 50.000 0.00 0.00 39.52 4.35
2256 3008 4.142004 ACATCCGAGGTGGTACTATTTGAC 60.142 45.833 0.00 0.00 39.52 3.18
2257 3009 4.028131 ACATCCGAGGTGGTACTATTTGA 58.972 43.478 0.00 0.00 39.52 2.69
2258 3010 4.402056 ACATCCGAGGTGGTACTATTTG 57.598 45.455 0.00 0.00 39.52 2.32
2259 3011 5.452255 TCTACATCCGAGGTGGTACTATTT 58.548 41.667 0.00 0.00 39.52 1.40
2260 3012 5.057843 TCTACATCCGAGGTGGTACTATT 57.942 43.478 0.00 0.00 39.52 1.73
2261 3013 4.719026 TCTACATCCGAGGTGGTACTAT 57.281 45.455 0.00 0.00 39.52 2.12
2262 3014 4.508551 TTCTACATCCGAGGTGGTACTA 57.491 45.455 0.00 0.00 39.52 1.82
2263 3015 3.377253 TTCTACATCCGAGGTGGTACT 57.623 47.619 0.00 0.00 39.52 2.73
2264 3016 4.460948 TTTTCTACATCCGAGGTGGTAC 57.539 45.455 0.00 0.00 39.52 3.34
2265 3017 6.795144 TTATTTTCTACATCCGAGGTGGTA 57.205 37.500 0.00 0.00 39.52 3.25
2266 3018 5.687166 TTATTTTCTACATCCGAGGTGGT 57.313 39.130 0.00 0.00 39.52 4.16
2267 3019 9.587772 CTATATTATTTTCTACATCCGAGGTGG 57.412 37.037 0.00 0.00 40.09 4.61
2268 3020 9.587772 CCTATATTATTTTCTACATCCGAGGTG 57.412 37.037 0.00 0.00 0.00 4.00
2269 3021 9.322769 ACCTATATTATTTTCTACATCCGAGGT 57.677 33.333 0.00 0.00 0.00 3.85
2270 3022 9.587772 CACCTATATTATTTTCTACATCCGAGG 57.412 37.037 0.00 0.00 0.00 4.63
2298 3050 6.423604 CCCATGAATTTACGCTTTCAGTTTTT 59.576 34.615 0.00 0.00 35.47 1.94
2299 3051 5.925969 CCCATGAATTTACGCTTTCAGTTTT 59.074 36.000 0.00 0.00 35.47 2.43
2300 3052 5.242838 TCCCATGAATTTACGCTTTCAGTTT 59.757 36.000 0.00 0.00 35.47 2.66
2301 3053 4.764823 TCCCATGAATTTACGCTTTCAGTT 59.235 37.500 0.00 0.00 35.47 3.16
2302 3054 4.331968 TCCCATGAATTTACGCTTTCAGT 58.668 39.130 0.00 0.00 35.47 3.41
2303 3055 4.963276 TCCCATGAATTTACGCTTTCAG 57.037 40.909 0.00 0.00 35.47 3.02
2304 3056 5.007034 TCTTCCCATGAATTTACGCTTTCA 58.993 37.500 0.00 0.00 36.38 2.69
2305 3057 5.560966 TCTTCCCATGAATTTACGCTTTC 57.439 39.130 0.00 0.00 0.00 2.62
2306 3058 5.622233 GCTTCTTCCCATGAATTTACGCTTT 60.622 40.000 0.00 0.00 0.00 3.51
2307 3059 4.142381 GCTTCTTCCCATGAATTTACGCTT 60.142 41.667 0.00 0.00 0.00 4.68
2308 3060 3.378427 GCTTCTTCCCATGAATTTACGCT 59.622 43.478 0.00 0.00 0.00 5.07
2309 3061 3.695816 GCTTCTTCCCATGAATTTACGC 58.304 45.455 0.00 0.00 0.00 4.42
2310 3062 3.374058 ACGCTTCTTCCCATGAATTTACG 59.626 43.478 0.00 0.00 0.00 3.18
2311 3063 4.965119 ACGCTTCTTCCCATGAATTTAC 57.035 40.909 0.00 0.00 0.00 2.01
2312 3064 6.601613 ACAATACGCTTCTTCCCATGAATTTA 59.398 34.615 0.00 0.00 0.00 1.40
2313 3065 5.418840 ACAATACGCTTCTTCCCATGAATTT 59.581 36.000 0.00 0.00 0.00 1.82
2314 3066 4.949856 ACAATACGCTTCTTCCCATGAATT 59.050 37.500 0.00 0.00 0.00 2.17
2315 3067 4.336433 CACAATACGCTTCTTCCCATGAAT 59.664 41.667 0.00 0.00 0.00 2.57
2316 3068 3.689161 CACAATACGCTTCTTCCCATGAA 59.311 43.478 0.00 0.00 0.00 2.57
2317 3069 3.055458 TCACAATACGCTTCTTCCCATGA 60.055 43.478 0.00 0.00 0.00 3.07
2318 3070 3.063997 GTCACAATACGCTTCTTCCCATG 59.936 47.826 0.00 0.00 0.00 3.66
2319 3071 3.270877 GTCACAATACGCTTCTTCCCAT 58.729 45.455 0.00 0.00 0.00 4.00
2320 3072 2.695359 GTCACAATACGCTTCTTCCCA 58.305 47.619 0.00 0.00 0.00 4.37
2321 3073 1.659098 CGTCACAATACGCTTCTTCCC 59.341 52.381 0.00 0.00 35.87 3.97
2322 3074 1.659098 CCGTCACAATACGCTTCTTCC 59.341 52.381 0.00 0.00 41.51 3.46
2323 3075 2.092211 CACCGTCACAATACGCTTCTTC 59.908 50.000 0.00 0.00 41.51 2.87
2324 3076 2.066262 CACCGTCACAATACGCTTCTT 58.934 47.619 0.00 0.00 41.51 2.52
2325 3077 1.271379 TCACCGTCACAATACGCTTCT 59.729 47.619 0.00 0.00 41.51 2.85
2326 3078 1.705256 TCACCGTCACAATACGCTTC 58.295 50.000 0.00 0.00 41.51 3.86
2327 3079 1.796459 GTTCACCGTCACAATACGCTT 59.204 47.619 0.00 0.00 41.51 4.68
2328 3080 1.425412 GTTCACCGTCACAATACGCT 58.575 50.000 0.00 0.00 41.51 5.07
2329 3081 0.441145 GGTTCACCGTCACAATACGC 59.559 55.000 0.00 0.00 41.51 4.42
2330 3082 1.073177 GGGTTCACCGTCACAATACG 58.927 55.000 0.00 0.00 42.49 3.06
2331 3083 1.802365 GTGGGTTCACCGTCACAATAC 59.198 52.381 1.63 0.00 44.64 1.89
2332 3084 1.605968 CGTGGGTTCACCGTCACAATA 60.606 52.381 6.29 0.00 44.64 1.90
2333 3085 0.882927 CGTGGGTTCACCGTCACAAT 60.883 55.000 6.29 0.00 44.64 2.71
2334 3086 1.521906 CGTGGGTTCACCGTCACAA 60.522 57.895 6.29 0.00 44.64 3.33
2335 3087 2.107343 CGTGGGTTCACCGTCACA 59.893 61.111 6.29 0.00 44.64 3.58
2336 3088 2.663852 CCGTGGGTTCACCGTCAC 60.664 66.667 0.00 0.00 44.64 3.67
2337 3089 2.838693 TCCGTGGGTTCACCGTCA 60.839 61.111 0.00 0.00 44.64 4.35
2338 3090 2.048503 CTCCGTGGGTTCACCGTC 60.049 66.667 0.00 0.00 44.64 4.79
2339 3091 2.841044 ACTCCGTGGGTTCACCGT 60.841 61.111 0.00 0.00 44.64 4.83
2340 3092 2.048503 GACTCCGTGGGTTCACCG 60.049 66.667 0.00 0.00 44.64 4.94
2341 3093 0.036306 ATTGACTCCGTGGGTTCACC 59.964 55.000 0.00 0.00 40.65 4.02
2342 3094 1.439679 GATTGACTCCGTGGGTTCAC 58.560 55.000 0.00 0.00 40.36 3.18
2343 3095 0.323629 GGATTGACTCCGTGGGTTCA 59.676 55.000 0.00 0.00 33.29 3.18
2344 3096 3.154589 GGATTGACTCCGTGGGTTC 57.845 57.895 0.00 0.00 33.29 3.62
2352 3104 6.619801 AATAATAAAGCACGGATTGACTCC 57.380 37.500 0.00 0.00 41.07 3.85
2353 3105 7.095187 CCCTAATAATAAAGCACGGATTGACTC 60.095 40.741 0.00 0.00 0.00 3.36
2354 3106 6.710744 CCCTAATAATAAAGCACGGATTGACT 59.289 38.462 0.00 0.00 0.00 3.41
2355 3107 6.072673 CCCCTAATAATAAAGCACGGATTGAC 60.073 42.308 0.00 0.00 0.00 3.18
2356 3108 6.001460 CCCCTAATAATAAAGCACGGATTGA 58.999 40.000 0.00 0.00 0.00 2.57
2357 3109 6.001460 TCCCCTAATAATAAAGCACGGATTG 58.999 40.000 0.00 0.00 0.00 2.67
2358 3110 6.195600 TCCCCTAATAATAAAGCACGGATT 57.804 37.500 0.00 0.00 0.00 3.01
2359 3111 5.836024 TCCCCTAATAATAAAGCACGGAT 57.164 39.130 0.00 0.00 0.00 4.18
2360 3112 5.367352 TCTTCCCCTAATAATAAAGCACGGA 59.633 40.000 0.00 0.00 0.00 4.69
2361 3113 5.617252 TCTTCCCCTAATAATAAAGCACGG 58.383 41.667 0.00 0.00 0.00 4.94
2362 3114 9.099454 GATATCTTCCCCTAATAATAAAGCACG 57.901 37.037 0.00 0.00 0.00 5.34
2363 3115 9.099454 CGATATCTTCCCCTAATAATAAAGCAC 57.901 37.037 0.34 0.00 0.00 4.40
2364 3116 7.769044 GCGATATCTTCCCCTAATAATAAAGCA 59.231 37.037 0.34 0.00 0.00 3.91
2365 3117 7.769044 TGCGATATCTTCCCCTAATAATAAAGC 59.231 37.037 0.34 0.00 0.00 3.51
2366 3118 9.319143 CTGCGATATCTTCCCCTAATAATAAAG 57.681 37.037 0.34 0.00 0.00 1.85
2367 3119 8.822805 ACTGCGATATCTTCCCCTAATAATAAA 58.177 33.333 0.34 0.00 0.00 1.40
2368 3120 8.375493 ACTGCGATATCTTCCCCTAATAATAA 57.625 34.615 0.34 0.00 0.00 1.40
2369 3121 7.973048 ACTGCGATATCTTCCCCTAATAATA 57.027 36.000 0.34 0.00 0.00 0.98
2370 3122 6.875972 ACTGCGATATCTTCCCCTAATAAT 57.124 37.500 0.34 0.00 0.00 1.28
2371 3123 7.973048 ATACTGCGATATCTTCCCCTAATAA 57.027 36.000 0.34 0.00 0.00 1.40
2372 3124 7.973048 AATACTGCGATATCTTCCCCTAATA 57.027 36.000 0.34 0.00 0.00 0.98
2373 3125 6.875972 AATACTGCGATATCTTCCCCTAAT 57.124 37.500 0.34 0.00 0.00 1.73
2374 3126 6.681729 AAATACTGCGATATCTTCCCCTAA 57.318 37.500 0.34 0.00 0.00 2.69
2375 3127 6.681729 AAAATACTGCGATATCTTCCCCTA 57.318 37.500 0.34 0.00 0.00 3.53
2376 3128 5.568620 AAAATACTGCGATATCTTCCCCT 57.431 39.130 0.34 0.00 0.00 4.79
2377 3129 5.531287 ACAAAAATACTGCGATATCTTCCCC 59.469 40.000 0.34 0.00 0.00 4.81
2378 3130 6.619801 ACAAAAATACTGCGATATCTTCCC 57.380 37.500 0.34 0.00 0.00 3.97
2379 3131 7.432252 CCAAACAAAAATACTGCGATATCTTCC 59.568 37.037 0.34 0.00 0.00 3.46
2380 3132 7.968405 ACCAAACAAAAATACTGCGATATCTTC 59.032 33.333 0.34 0.00 0.00 2.87
2381 3133 7.826690 ACCAAACAAAAATACTGCGATATCTT 58.173 30.769 0.34 0.00 0.00 2.40
2382 3134 7.391148 ACCAAACAAAAATACTGCGATATCT 57.609 32.000 0.34 0.00 0.00 1.98
2383 3135 8.395633 AGTACCAAACAAAAATACTGCGATATC 58.604 33.333 0.00 0.00 0.00 1.63
2384 3136 8.276252 AGTACCAAACAAAAATACTGCGATAT 57.724 30.769 0.00 0.00 0.00 1.63
2586 3343 5.645056 ACTCAGGAGATAGTGAGAGATGA 57.355 43.478 2.79 0.00 42.49 2.92
2587 3344 5.507817 GCAACTCAGGAGATAGTGAGAGATG 60.508 48.000 2.79 0.00 42.49 2.90
2588 3345 4.584325 GCAACTCAGGAGATAGTGAGAGAT 59.416 45.833 2.79 0.00 42.49 2.75
2589 3346 3.951037 GCAACTCAGGAGATAGTGAGAGA 59.049 47.826 2.79 0.00 42.49 3.10
2590 3347 3.953612 AGCAACTCAGGAGATAGTGAGAG 59.046 47.826 2.79 0.00 42.49 3.20
2600 3357 5.239306 TGTGAAAACAATAGCAACTCAGGAG 59.761 40.000 0.00 0.00 0.00 3.69
2742 4002 4.333649 ACAATGTCAGCAATTGATAGACCG 59.666 41.667 10.34 7.51 38.29 4.79
2841 4131 1.280457 AGAGCTGTTACCTCCAAGGG 58.720 55.000 0.00 0.00 40.58 3.95
2856 4147 2.224646 ACCAGTTCCTGAGGAAAAGAGC 60.225 50.000 16.79 2.89 43.86 4.09
2907 4198 2.711542 CGGACAAGGCTCTGGTATTTT 58.288 47.619 0.00 0.00 0.00 1.82
3035 4343 2.175931 TCCTTCAAACCAGGCACCTTTA 59.824 45.455 0.00 0.00 0.00 1.85
3552 4860 4.695455 GGATCTCGAAGTGATTTGTTTGGA 59.305 41.667 0.00 0.00 41.12 3.53
3585 4893 0.906775 GGGGATCAGGGTTACAACGA 59.093 55.000 0.00 0.00 0.00 3.85
3591 4899 1.977854 CGATGATGGGGATCAGGGTTA 59.022 52.381 0.00 0.00 33.59 2.85
4703 6072 9.924650 GTATCTAACTAGTCCAAGTGAAAAAGA 57.075 33.333 0.00 0.00 0.00 2.52
4729 6098 9.173939 CAAAAGTCTCAAACTGTGCTAATTTAG 57.826 33.333 0.00 0.00 38.58 1.85
4732 6101 7.333528 TCAAAAGTCTCAAACTGTGCTAATT 57.666 32.000 0.00 0.00 38.58 1.40
4733 6102 6.942532 TCAAAAGTCTCAAACTGTGCTAAT 57.057 33.333 0.00 0.00 38.58 1.73
4734 6103 6.942532 ATCAAAAGTCTCAAACTGTGCTAA 57.057 33.333 0.00 0.00 38.58 3.09
4735 6104 6.942532 AATCAAAAGTCTCAAACTGTGCTA 57.057 33.333 0.00 0.00 38.58 3.49
4738 6107 7.916977 TCATCAAATCAAAAGTCTCAAACTGTG 59.083 33.333 0.00 0.00 38.58 3.66
4743 6174 9.263538 CCAATTCATCAAATCAAAAGTCTCAAA 57.736 29.630 0.00 0.00 0.00 2.69
4758 6189 4.111255 TGAGTTCCCACCAATTCATCAA 57.889 40.909 0.00 0.00 0.00 2.57
4759 6190 3.805066 TGAGTTCCCACCAATTCATCA 57.195 42.857 0.00 0.00 0.00 3.07
4760 6191 3.826157 TGTTGAGTTCCCACCAATTCATC 59.174 43.478 0.00 0.00 0.00 2.92
4761 6192 3.843422 TGTTGAGTTCCCACCAATTCAT 58.157 40.909 0.00 0.00 0.00 2.57
4764 6195 2.899256 CCATGTTGAGTTCCCACCAATT 59.101 45.455 0.00 0.00 0.00 2.32
4765 6196 2.528564 CCATGTTGAGTTCCCACCAAT 58.471 47.619 0.00 0.00 0.00 3.16
4767 6198 0.539438 GCCATGTTGAGTTCCCACCA 60.539 55.000 0.00 0.00 0.00 4.17
4769 6200 1.000274 GTTGCCATGTTGAGTTCCCAC 60.000 52.381 0.00 0.00 0.00 4.61
4863 6474 6.185511 ACTCATCCAAGAAACATCATGACAT 58.814 36.000 0.00 0.00 0.00 3.06
4864 6475 5.563592 ACTCATCCAAGAAACATCATGACA 58.436 37.500 0.00 0.00 0.00 3.58
5364 7065 9.632807 GTTGGCATATACTCAAACATGTAAAAA 57.367 29.630 0.00 0.00 0.00 1.94
5405 7107 7.773489 TCTTGATATTTGTTCCACAATCCAA 57.227 32.000 0.00 0.00 38.00 3.53
5492 7195 4.307032 ACATGGCAGTATTTCAAGAGGT 57.693 40.909 0.00 0.00 0.00 3.85
5496 7199 5.634859 GGTTGAAACATGGCAGTATTTCAAG 59.365 40.000 24.77 0.01 46.30 3.02
5519 7222 5.415077 AGATGAAATTGAAGAGCAACTGAGG 59.585 40.000 0.00 0.00 39.78 3.86
5545 7248 2.248280 TCGCAAAAAGGACTGCAGTA 57.752 45.000 21.73 0.00 38.52 2.74
5562 7265 1.651240 CTGAAGTGCAGCCCCAATCG 61.651 60.000 0.00 0.00 37.90 3.34
5615 7318 2.628178 TCAAGAACACGACAGATGGACT 59.372 45.455 0.00 0.00 0.00 3.85
5618 7321 1.728971 GCTCAAGAACACGACAGATGG 59.271 52.381 0.00 0.00 0.00 3.51
5619 7322 2.407090 TGCTCAAGAACACGACAGATG 58.593 47.619 0.00 0.00 0.00 2.90
5642 7346 0.865769 CCTTACACAAGACACACCGC 59.134 55.000 0.00 0.00 33.20 5.68
5722 7426 6.071051 TCAGCCAAAAGAACAAAAGTAGGTTT 60.071 34.615 0.00 0.00 0.00 3.27
5723 7427 5.420739 TCAGCCAAAAGAACAAAAGTAGGTT 59.579 36.000 0.00 0.00 0.00 3.50
5728 7432 3.785486 GCTCAGCCAAAAGAACAAAAGT 58.215 40.909 0.00 0.00 0.00 2.66
5762 7477 5.470437 GTCAAAACCTTAGCAGATATAGGGC 59.530 44.000 0.00 0.00 31.91 5.19
5796 7511 6.532119 AGACAATATACCCCACTCTAGAGA 57.468 41.667 26.57 2.68 0.00 3.10
5797 7512 7.392113 CAGTAGACAATATACCCCACTCTAGAG 59.608 44.444 18.49 18.49 0.00 2.43
5798 7513 7.147177 ACAGTAGACAATATACCCCACTCTAGA 60.147 40.741 0.00 0.00 0.00 2.43
5799 7514 7.005296 ACAGTAGACAATATACCCCACTCTAG 58.995 42.308 0.00 0.00 0.00 2.43
5800 7515 6.776116 CACAGTAGACAATATACCCCACTCTA 59.224 42.308 0.00 0.00 0.00 2.43
5801 7516 5.598830 CACAGTAGACAATATACCCCACTCT 59.401 44.000 0.00 0.00 0.00 3.24
5802 7517 5.363005 ACACAGTAGACAATATACCCCACTC 59.637 44.000 0.00 0.00 0.00 3.51
5803 7518 5.278061 ACACAGTAGACAATATACCCCACT 58.722 41.667 0.00 0.00 0.00 4.00
5804 7519 5.452917 GGACACAGTAGACAATATACCCCAC 60.453 48.000 0.00 0.00 0.00 4.61
5805 7520 4.652421 GGACACAGTAGACAATATACCCCA 59.348 45.833 0.00 0.00 0.00 4.96
5806 7521 4.261909 CGGACACAGTAGACAATATACCCC 60.262 50.000 0.00 0.00 0.00 4.95
5807 7522 4.581824 TCGGACACAGTAGACAATATACCC 59.418 45.833 0.00 0.00 0.00 3.69
5808 7523 5.517904 GTCGGACACAGTAGACAATATACC 58.482 45.833 2.62 0.00 34.09 2.73
5809 7524 5.203370 CGTCGGACACAGTAGACAATATAC 58.797 45.833 9.10 0.00 33.56 1.47
5810 7525 4.260907 GCGTCGGACACAGTAGACAATATA 60.261 45.833 9.10 0.00 33.56 0.86
5811 7526 3.488721 GCGTCGGACACAGTAGACAATAT 60.489 47.826 9.10 0.00 33.56 1.28
5814 7529 0.039798 GCGTCGGACACAGTAGACAA 60.040 55.000 9.10 0.00 33.56 3.18
5817 7532 0.036105 TAGGCGTCGGACACAGTAGA 60.036 55.000 9.10 0.00 0.00 2.59
5822 7537 0.172578 CTTCATAGGCGTCGGACACA 59.827 55.000 9.10 0.00 0.00 3.72
5835 7550 4.019411 TGGACAAATCAGTCAGCCTTCATA 60.019 41.667 0.00 0.00 40.29 2.15
5955 7673 3.756933 ATGCTTGTTTGGTTTGATGCT 57.243 38.095 0.00 0.00 0.00 3.79
6053 7771 7.983307 AGTATTAGTATTCGTGACTTCTCGTT 58.017 34.615 1.08 0.00 34.81 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.