Multiple sequence alignment - TraesCS3D01G187600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G187600 chr3D 100.000 5834 0 0 1 5834 174058349 174052516 0.000000e+00 10774.0
1 TraesCS3D01G187600 chr3D 93.220 885 51 9 20 897 300540707 300541589 0.000000e+00 1293.0
2 TraesCS3D01G187600 chr3D 77.838 555 79 22 3416 3938 264714998 264714456 2.640000e-78 303.0
3 TraesCS3D01G187600 chr3B 97.197 2818 49 8 2391 5189 252805491 252802685 0.000000e+00 4739.0
4 TraesCS3D01G187600 chr3B 93.928 1087 17 3 1309 2395 252806561 252805524 0.000000e+00 1596.0
5 TraesCS3D01G187600 chr3B 96.487 427 10 5 896 1320 252808333 252807910 0.000000e+00 701.0
6 TraesCS3D01G187600 chr3B 88.966 145 8 4 5454 5592 252802672 252802530 7.770000e-39 172.0
7 TraesCS3D01G187600 chr5D 93.905 886 45 9 20 901 525174595 525175475 0.000000e+00 1328.0
8 TraesCS3D01G187600 chr5D 79.537 562 54 33 3417 3938 282360324 282360864 1.560000e-90 344.0
9 TraesCS3D01G187600 chr5D 93.458 107 6 1 5205 5310 399300221 399300327 2.180000e-34 158.0
10 TraesCS3D01G187600 chr7D 92.986 884 53 8 20 897 421145001 421144121 0.000000e+00 1280.0
11 TraesCS3D01G187600 chr7D 92.593 891 52 8 20 897 136988165 136987276 0.000000e+00 1267.0
12 TraesCS3D01G187600 chr7D 97.196 107 2 1 5205 5310 225183148 225183254 4.640000e-41 180.0
13 TraesCS3D01G187600 chr3A 91.729 931 60 9 2344 3264 212743143 212742220 0.000000e+00 1277.0
14 TraesCS3D01G187600 chr3A 89.778 812 58 13 4390 5193 212741703 212740909 0.000000e+00 1016.0
15 TraesCS3D01G187600 chr3A 91.837 637 36 7 1508 2135 212743883 212743254 0.000000e+00 874.0
16 TraesCS3D01G187600 chr3A 89.723 613 24 20 903 1511 212744660 212744083 0.000000e+00 747.0
17 TraesCS3D01G187600 chr3A 89.316 468 31 8 3329 3777 212742230 212741763 2.360000e-158 569.0
18 TraesCS3D01G187600 chr3A 95.495 222 10 0 5454 5675 212740911 212740690 7.190000e-94 355.0
19 TraesCS3D01G187600 chr3A 80.380 158 21 8 5312 5459 77924488 77924331 1.720000e-20 111.0
20 TraesCS3D01G187600 chr3A 80.380 158 21 8 5312 5459 77929515 77929358 1.720000e-20 111.0
21 TraesCS3D01G187600 chr1D 92.316 898 58 10 20 911 457135944 457136836 0.000000e+00 1266.0
22 TraesCS3D01G187600 chr1D 92.260 323 19 2 3939 4257 265574817 265574497 2.480000e-123 453.0
23 TraesCS3D01G187600 chr1D 97.321 112 2 1 5205 5315 62706341 62706452 7.720000e-44 189.0
24 TraesCS3D01G187600 chr2D 92.334 887 54 11 20 897 53968035 53967154 0.000000e+00 1249.0
25 TraesCS3D01G187600 chr2D 92.135 890 56 12 20 897 125736925 125736038 0.000000e+00 1243.0
26 TraesCS3D01G187600 chr2D 92.144 891 55 11 20 897 318251812 318252700 0.000000e+00 1243.0
27 TraesCS3D01G187600 chr2D 93.478 322 17 2 3939 4256 361254018 361254339 5.290000e-130 475.0
28 TraesCS3D01G187600 chr2D 93.231 325 16 3 3939 4257 376694544 376694220 1.900000e-129 473.0
29 TraesCS3D01G187600 chr2D 92.378 328 15 5 3939 4258 409601894 409602219 5.330000e-125 459.0
30 TraesCS3D01G187600 chr2D 91.592 333 21 4 3939 4265 490819693 490819362 2.480000e-123 453.0
31 TraesCS3D01G187600 chr2D 96.364 110 3 1 5208 5316 493879636 493879527 4.640000e-41 180.0
32 TraesCS3D01G187600 chr2D 93.333 105 7 0 5211 5315 179350783 179350679 7.830000e-34 156.0
33 TraesCS3D01G187600 chr2D 82.927 164 24 4 3777 3938 579949297 579949458 1.690000e-30 145.0
34 TraesCS3D01G187600 chr2D 77.551 147 29 4 5313 5456 318821623 318821768 1.040000e-12 86.1
35 TraesCS3D01G187600 chr4D 92.135 890 54 10 20 897 50824711 50823826 0.000000e+00 1242.0
36 TraesCS3D01G187600 chr4D 93.558 326 16 3 3936 4256 274462304 274462629 1.140000e-131 481.0
37 TraesCS3D01G187600 chr1A 92.923 325 16 3 3939 4256 292767188 292767512 3.180000e-127 466.0
38 TraesCS3D01G187600 chr1A 92.857 112 7 1 5205 5315 525186604 525186715 1.680000e-35 161.0
39 TraesCS3D01G187600 chr1A 82.692 156 17 8 5311 5456 519631549 519631394 4.740000e-26 130.0
40 TraesCS3D01G187600 chr6B 92.025 326 17 6 3939 4256 365705954 365706278 3.210000e-122 449.0
41 TraesCS3D01G187600 chr6B 78.782 542 67 26 3416 3920 151607710 151607180 2.620000e-83 320.0
42 TraesCS3D01G187600 chr6A 78.136 558 71 25 3416 3932 424095650 424096197 2.040000e-79 307.0
43 TraesCS3D01G187600 chr1B 75.906 552 94 25 3418 3938 405706710 405707253 4.520000e-61 246.0
44 TraesCS3D01G187600 chr1B 77.083 480 57 27 3472 3920 37319818 37319361 1.640000e-55 228.0
45 TraesCS3D01G187600 chr1B 76.507 481 61 27 3472 3920 37570705 37571165 1.270000e-51 215.0
46 TraesCS3D01G187600 chr1B 76.091 481 63 25 3472 3920 38119338 38118878 2.760000e-48 204.0
47 TraesCS3D01G187600 chr1B 83.333 132 17 5 3779 3908 569982199 569982071 3.690000e-22 117.0
48 TraesCS3D01G187600 chrUn 76.667 480 61 24 3472 3920 287497 287956 9.840000e-53 219.0
49 TraesCS3D01G187600 chr4A 82.533 229 35 5 3541 3767 898483 898258 4.610000e-46 196.0
50 TraesCS3D01G187600 chr4A 93.396 106 5 2 5205 5309 731574275 731574379 7.830000e-34 156.0
51 TraesCS3D01G187600 chr5A 80.866 277 23 19 3417 3672 374899591 374899858 2.150000e-44 191.0
52 TraesCS3D01G187600 chr5A 84.177 158 13 10 5312 5458 144389892 144390048 6.090000e-30 143.0
53 TraesCS3D01G187600 chr5B 94.872 117 6 0 3417 3533 320413539 320413655 3.590000e-42 183.0
54 TraesCS3D01G187600 chr4B 77.987 318 45 16 3635 3938 369944781 369945087 6.010000e-40 176.0
55 TraesCS3D01G187600 chr2B 97.059 102 3 0 5209 5310 244787571 244787470 7.770000e-39 172.0
56 TraesCS3D01G187600 chr6D 91.525 118 9 1 3416 3533 296867482 296867598 1.680000e-35 161.0
57 TraesCS3D01G187600 chr7B 92.453 106 7 1 5205 5309 648142407 648142512 3.640000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G187600 chr3D 174052516 174058349 5833 True 10774.000000 10774 100.0000 1 5834 1 chr3D.!!$R1 5833
1 TraesCS3D01G187600 chr3D 300540707 300541589 882 False 1293.000000 1293 93.2200 20 897 1 chr3D.!!$F1 877
2 TraesCS3D01G187600 chr3D 264714456 264714998 542 True 303.000000 303 77.8380 3416 3938 1 chr3D.!!$R2 522
3 TraesCS3D01G187600 chr3B 252802530 252808333 5803 True 1802.000000 4739 94.1445 896 5592 4 chr3B.!!$R1 4696
4 TraesCS3D01G187600 chr5D 525174595 525175475 880 False 1328.000000 1328 93.9050 20 901 1 chr5D.!!$F3 881
5 TraesCS3D01G187600 chr5D 282360324 282360864 540 False 344.000000 344 79.5370 3417 3938 1 chr5D.!!$F1 521
6 TraesCS3D01G187600 chr7D 421144121 421145001 880 True 1280.000000 1280 92.9860 20 897 1 chr7D.!!$R2 877
7 TraesCS3D01G187600 chr7D 136987276 136988165 889 True 1267.000000 1267 92.5930 20 897 1 chr7D.!!$R1 877
8 TraesCS3D01G187600 chr3A 212740690 212744660 3970 True 806.333333 1277 91.3130 903 5675 6 chr3A.!!$R3 4772
9 TraesCS3D01G187600 chr1D 457135944 457136836 892 False 1266.000000 1266 92.3160 20 911 1 chr1D.!!$F2 891
10 TraesCS3D01G187600 chr2D 53967154 53968035 881 True 1249.000000 1249 92.3340 20 897 1 chr2D.!!$R1 877
11 TraesCS3D01G187600 chr2D 125736038 125736925 887 True 1243.000000 1243 92.1350 20 897 1 chr2D.!!$R2 877
12 TraesCS3D01G187600 chr2D 318251812 318252700 888 False 1243.000000 1243 92.1440 20 897 1 chr2D.!!$F1 877
13 TraesCS3D01G187600 chr4D 50823826 50824711 885 True 1242.000000 1242 92.1350 20 897 1 chr4D.!!$R1 877
14 TraesCS3D01G187600 chr6B 151607180 151607710 530 True 320.000000 320 78.7820 3416 3920 1 chr6B.!!$R1 504
15 TraesCS3D01G187600 chr6A 424095650 424096197 547 False 307.000000 307 78.1360 3416 3932 1 chr6A.!!$F1 516
16 TraesCS3D01G187600 chr1B 405706710 405707253 543 False 246.000000 246 75.9060 3418 3938 1 chr1B.!!$F2 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 379 0.602905 CGCGAAGAAGGGAAACACCT 60.603 55.000 0.00 0.0 44.56 4.00 F
1226 1262 0.104356 TACTCCCCACTGTTTCCCCA 60.104 55.000 0.00 0.0 0.00 4.96 F
1399 2795 1.202417 CGGTTCATGTATGCTCGACCT 60.202 52.381 0.00 0.0 0.00 3.85 F
2246 3855 0.322648 TGCTCCCTGTCACAGTCATG 59.677 55.000 3.56 0.0 0.00 3.07 F
3317 4973 0.543277 TTGGCTGCATGGAGAGGTAG 59.457 55.000 19.59 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1364 2760 0.321671 AACCGAAGCTAGCAGCAAGA 59.678 50.000 18.83 0.00 45.56 3.02 R
2228 3837 0.392193 CCATGACTGTGACAGGGAGC 60.392 60.000 17.92 3.99 40.97 4.70 R
2507 4153 1.605710 CGCATGGGCTAGAAATCTTGG 59.394 52.381 0.00 0.00 38.10 3.61 R
3948 5673 1.290134 GGCTAGGCCCCTAATATGCT 58.710 55.000 4.61 0.00 44.06 3.79 R
5302 7052 0.175989 CAGGACCTAAGAGCCCGTTC 59.824 60.000 0.00 0.00 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 2.686558 GCATTGACAAGTGCGAGAAA 57.313 45.000 6.78 0.00 0.00 2.52
130 131 0.615850 GCCAAGGAGACCTACAAGCT 59.384 55.000 0.00 0.00 31.13 3.74
140 141 3.932580 CTACAAGCTGGACGCGCCA 62.933 63.158 18.85 18.85 46.96 5.69
269 270 3.695606 GAGGCACAGACCCGAGCA 61.696 66.667 0.00 0.00 0.00 4.26
378 379 0.602905 CGCGAAGAAGGGAAACACCT 60.603 55.000 0.00 0.00 44.56 4.00
384 385 2.986050 AGAAGGGAAACACCTACCTGA 58.014 47.619 0.00 0.00 40.87 3.86
672 694 2.646250 GCGCGTCTTTTCTGCTTTTTA 58.354 42.857 8.43 0.00 0.00 1.52
726 750 2.889988 CGCATGATCGCCGAACCA 60.890 61.111 0.00 0.00 0.00 3.67
781 806 4.669809 ATTTGCCGCGGGTTGGGA 62.670 61.111 29.38 0.00 0.00 4.37
823 852 2.442272 GAGCTAGGTCGCCCCAGA 60.442 66.667 6.12 0.00 34.66 3.86
826 855 1.834822 GCTAGGTCGCCCCAGAGAT 60.835 63.158 0.00 0.00 34.66 2.75
828 857 1.519751 CTAGGTCGCCCCAGAGATCG 61.520 65.000 0.00 0.00 34.66 3.69
1146 1180 4.753662 CGGTCCTGGGACGAGGGA 62.754 72.222 12.86 0.00 45.41 4.20
1215 1249 1.075050 CTACGCTCCCTATACTCCCCA 59.925 57.143 0.00 0.00 0.00 4.96
1224 1260 2.438392 CCTATACTCCCCACTGTTTCCC 59.562 54.545 0.00 0.00 0.00 3.97
1226 1262 0.104356 TACTCCCCACTGTTTCCCCA 60.104 55.000 0.00 0.00 0.00 4.96
1349 2745 1.380515 TCTCTAGCTCGCTGCCCTT 60.381 57.895 0.85 0.00 44.23 3.95
1399 2795 1.202417 CGGTTCATGTATGCTCGACCT 60.202 52.381 0.00 0.00 0.00 3.85
1432 2830 3.922171 AATGAGTCTCAGTGGGGATTC 57.078 47.619 8.82 0.00 0.00 2.52
2145 3754 9.851686 TCTTCCTTCATATTTGCATATTGTAGT 57.148 29.630 0.00 0.00 0.00 2.73
2146 3755 9.888878 CTTCCTTCATATTTGCATATTGTAGTG 57.111 33.333 0.00 0.00 0.00 2.74
2147 3756 8.978874 TCCTTCATATTTGCATATTGTAGTGT 57.021 30.769 0.00 0.00 0.00 3.55
2148 3757 8.839343 TCCTTCATATTTGCATATTGTAGTGTG 58.161 33.333 0.00 0.00 0.00 3.82
2149 3758 7.592533 CCTTCATATTTGCATATTGTAGTGTGC 59.407 37.037 0.00 0.00 36.83 4.57
2150 3759 7.565323 TCATATTTGCATATTGTAGTGTGCA 57.435 32.000 0.00 0.00 43.17 4.57
2151 3760 8.168790 TCATATTTGCATATTGTAGTGTGCAT 57.831 30.769 0.00 0.00 44.04 3.96
2152 3761 8.631797 TCATATTTGCATATTGTAGTGTGCATT 58.368 29.630 0.00 0.00 44.04 3.56
2153 3762 8.696175 CATATTTGCATATTGTAGTGTGCATTG 58.304 33.333 0.00 0.00 44.04 2.82
2154 3763 4.031418 TGCATATTGTAGTGTGCATTGC 57.969 40.909 0.46 0.46 40.59 3.56
2155 3764 3.442977 TGCATATTGTAGTGTGCATTGCA 59.557 39.130 7.38 7.38 40.59 4.08
2156 3765 4.098196 TGCATATTGTAGTGTGCATTGCAT 59.902 37.500 15.49 1.17 40.59 3.96
2157 3766 5.298777 TGCATATTGTAGTGTGCATTGCATA 59.701 36.000 15.49 9.58 40.59 3.14
2158 3767 6.016108 TGCATATTGTAGTGTGCATTGCATAT 60.016 34.615 15.49 6.53 40.59 1.78
2159 3768 6.864685 GCATATTGTAGTGTGCATTGCATATT 59.135 34.615 15.49 11.50 41.91 1.28
2160 3769 7.148869 GCATATTGTAGTGTGCATTGCATATTG 60.149 37.037 15.49 3.17 41.91 1.90
2161 3770 5.641783 TTGTAGTGTGCATTGCATATTGT 57.358 34.783 15.49 4.11 41.91 2.71
2162 3771 6.749923 TTGTAGTGTGCATTGCATATTGTA 57.250 33.333 15.49 3.17 41.91 2.41
2228 3837 2.803956 TGATACTATACGCCCTCCCTG 58.196 52.381 0.00 0.00 0.00 4.45
2239 3848 2.664081 CCTCCCTGCTCCCTGTCAC 61.664 68.421 0.00 0.00 0.00 3.67
2240 3849 1.915266 CTCCCTGCTCCCTGTCACA 60.915 63.158 0.00 0.00 0.00 3.58
2246 3855 0.322648 TGCTCCCTGTCACAGTCATG 59.677 55.000 3.56 0.00 0.00 3.07
2267 3876 7.498900 GTCATGGTAAATGATCCATAACAGTCA 59.501 37.037 0.00 0.00 41.79 3.41
2480 4126 7.315247 TGTGTTAGAATTGTATGCATACCAC 57.685 36.000 29.36 24.92 32.33 4.16
2507 4153 8.725148 CCTAGATGGTTATTGCACATAGATTTC 58.275 37.037 0.00 0.00 0.00 2.17
2509 4155 7.062322 AGATGGTTATTGCACATAGATTTCCA 58.938 34.615 0.00 0.00 0.00 3.53
2841 4496 5.011125 AGCTCTCTTACTGCTGAGTTTTACA 59.989 40.000 0.00 0.00 35.54 2.41
3010 4666 2.724977 TGTCTGAAAGTCAGGTAGCG 57.275 50.000 5.46 0.00 44.39 4.26
3022 4678 1.000163 CAGGTAGCGTTGACTGTCAGT 60.000 52.381 10.77 4.81 0.00 3.41
3317 4973 0.543277 TTGGCTGCATGGAGAGGTAG 59.457 55.000 19.59 0.00 0.00 3.18
3544 5222 6.807789 TGTTACTTTTACTCGCCCAAAAATT 58.192 32.000 0.00 0.00 0.00 1.82
3562 5246 9.349713 CCAAAAATTCACTGCTACCCTAATATA 57.650 33.333 0.00 0.00 0.00 0.86
3948 5673 8.812513 ATCTTTTGATGATCTTGTTATGACCA 57.187 30.769 0.00 0.00 37.85 4.02
4131 5856 3.629220 GGAGACCTAACCCTAGCCA 57.371 57.895 0.00 0.00 0.00 4.75
4162 5891 3.870422 CTCTCTCTCTCGCGCGCA 61.870 66.667 32.61 17.14 0.00 6.09
4286 6027 0.890996 CCAGTGGCAACTCCTTGTCC 60.891 60.000 0.00 0.00 32.98 4.02
4788 6530 0.250770 ACGTTGAGAAAGCCCCTTCC 60.251 55.000 0.00 0.00 0.00 3.46
5022 6771 6.241385 GTGTATGCGACAGTTTCTGTTATTC 58.759 40.000 3.91 0.32 45.44 1.75
5023 6772 5.929415 TGTATGCGACAGTTTCTGTTATTCA 59.071 36.000 3.91 1.70 45.44 2.57
5038 6788 6.368791 TCTGTTATTCACGTTTGATGAAGAGG 59.631 38.462 0.00 0.00 39.36 3.69
5043 6793 2.872245 CACGTTTGATGAAGAGGTGTGT 59.128 45.455 0.00 0.00 0.00 3.72
5059 6809 0.179225 GTGTTCGCGTGCAGGTAATG 60.179 55.000 5.77 0.00 0.00 1.90
5066 6816 2.009774 GCGTGCAGGTAATGTGAGAAT 58.990 47.619 8.40 0.00 0.00 2.40
5076 6826 0.904649 ATGTGAGAATGAGCGGGTGA 59.095 50.000 0.00 0.00 0.00 4.02
5111 6861 0.593128 GTTGTCGCATTGGCTGAACT 59.407 50.000 0.00 0.00 38.10 3.01
5114 6864 1.073025 TCGCATTGGCTGAACTGGT 59.927 52.632 0.00 0.00 38.10 4.00
5115 6865 0.537143 TCGCATTGGCTGAACTGGTT 60.537 50.000 0.00 0.00 38.10 3.67
5121 6871 2.380064 TGGCTGAACTGGTTTTGGAT 57.620 45.000 0.00 0.00 0.00 3.41
5135 6885 7.041372 ACTGGTTTTGGATCATATAACATACGC 60.041 37.037 0.00 0.00 0.00 4.42
5139 6889 8.721478 GTTTTGGATCATATAACATACGCAGAT 58.279 33.333 0.00 0.00 0.00 2.90
5140 6890 8.846943 TTTGGATCATATAACATACGCAGATT 57.153 30.769 0.00 0.00 0.00 2.40
5141 6891 7.832503 TGGATCATATAACATACGCAGATTG 57.167 36.000 0.00 0.00 0.00 2.67
5190 6940 4.275689 TGTTCAAACGCAAGATGAGACATT 59.724 37.500 0.00 0.00 43.62 2.71
5191 6941 5.215160 GTTCAAACGCAAGATGAGACATTT 58.785 37.500 0.00 0.00 43.62 2.32
5192 6942 6.017523 TGTTCAAACGCAAGATGAGACATTTA 60.018 34.615 0.00 0.00 43.62 1.40
5194 6944 6.602179 TCAAACGCAAGATGAGACATTTAAG 58.398 36.000 0.00 0.00 43.62 1.85
5196 6946 3.375299 ACGCAAGATGAGACATTTAAGGC 59.625 43.478 0.00 0.00 43.62 4.35
5198 6948 3.950395 GCAAGATGAGACATTTAAGGCCT 59.050 43.478 0.00 0.00 0.00 5.19
5202 6952 5.189180 AGATGAGACATTTAAGGCCTGTTC 58.811 41.667 5.69 1.98 0.00 3.18
5203 6953 3.334691 TGAGACATTTAAGGCCTGTTCG 58.665 45.455 5.69 0.00 0.00 3.95
5206 6956 2.678336 GACATTTAAGGCCTGTTCGGAG 59.322 50.000 5.69 0.00 33.16 4.63
5208 6958 2.467566 TTTAAGGCCTGTTCGGAGTC 57.532 50.000 5.69 0.00 33.16 3.36
5209 6959 0.611714 TTAAGGCCTGTTCGGAGTCC 59.388 55.000 5.69 0.00 33.16 3.85
5210 6960 1.262640 TAAGGCCTGTTCGGAGTCCC 61.263 60.000 5.69 0.00 33.16 4.46
5211 6961 3.003763 GGCCTGTTCGGAGTCCCT 61.004 66.667 2.80 0.00 33.16 4.20
5212 6962 2.579738 GCCTGTTCGGAGTCCCTC 59.420 66.667 2.80 0.00 33.16 4.30
5213 6963 3.020237 GCCTGTTCGGAGTCCCTCC 62.020 68.421 2.80 0.00 46.44 4.30
5232 6982 3.138798 GGAGCGGACCGAGCAGTA 61.139 66.667 20.50 0.00 37.01 2.74
5233 6983 2.409651 GAGCGGACCGAGCAGTAG 59.590 66.667 20.50 0.00 37.01 2.57
5234 6984 2.045242 AGCGGACCGAGCAGTAGA 60.045 61.111 20.50 0.00 37.01 2.59
5235 6985 1.448922 GAGCGGACCGAGCAGTAGAT 61.449 60.000 20.50 0.00 37.01 1.98
5236 6986 1.038130 AGCGGACCGAGCAGTAGATT 61.038 55.000 20.50 0.00 37.01 2.40
5237 6987 0.666913 GCGGACCGAGCAGTAGATTA 59.333 55.000 20.50 0.00 34.19 1.75
5238 6988 1.066605 GCGGACCGAGCAGTAGATTAA 59.933 52.381 20.50 0.00 34.19 1.40
5239 6989 2.480759 GCGGACCGAGCAGTAGATTAAA 60.481 50.000 20.50 0.00 34.19 1.52
5240 6990 3.777478 CGGACCGAGCAGTAGATTAAAA 58.223 45.455 8.64 0.00 0.00 1.52
5241 6991 4.369182 CGGACCGAGCAGTAGATTAAAAT 58.631 43.478 8.64 0.00 0.00 1.82
5242 6992 4.209288 CGGACCGAGCAGTAGATTAAAATG 59.791 45.833 8.64 0.00 0.00 2.32
5243 6993 5.116882 GGACCGAGCAGTAGATTAAAATGT 58.883 41.667 0.00 0.00 0.00 2.71
5244 6994 5.585047 GGACCGAGCAGTAGATTAAAATGTT 59.415 40.000 0.00 0.00 0.00 2.71
5245 6995 6.422776 ACCGAGCAGTAGATTAAAATGTTG 57.577 37.500 0.00 0.00 0.00 3.33
5246 6996 5.354234 ACCGAGCAGTAGATTAAAATGTTGG 59.646 40.000 0.00 0.00 0.00 3.77
5247 6997 5.584649 CCGAGCAGTAGATTAAAATGTTGGA 59.415 40.000 0.00 0.00 0.00 3.53
5248 6998 6.238211 CCGAGCAGTAGATTAAAATGTTGGAG 60.238 42.308 0.00 0.00 0.00 3.86
5249 6999 6.442513 AGCAGTAGATTAAAATGTTGGAGC 57.557 37.500 0.00 0.00 0.00 4.70
5250 7000 5.065218 AGCAGTAGATTAAAATGTTGGAGCG 59.935 40.000 0.00 0.00 0.00 5.03
5251 7001 5.064707 GCAGTAGATTAAAATGTTGGAGCGA 59.935 40.000 0.00 0.00 0.00 4.93
5252 7002 6.709643 CAGTAGATTAAAATGTTGGAGCGAG 58.290 40.000 0.00 0.00 0.00 5.03
5253 7003 4.622701 AGATTAAAATGTTGGAGCGAGC 57.377 40.909 0.00 0.00 0.00 5.03
5254 7004 4.009675 AGATTAAAATGTTGGAGCGAGCA 58.990 39.130 0.00 0.00 0.00 4.26
5255 7005 4.458989 AGATTAAAATGTTGGAGCGAGCAA 59.541 37.500 0.00 0.00 0.00 3.91
5256 7006 4.576216 TTAAAATGTTGGAGCGAGCAAA 57.424 36.364 0.00 0.00 0.00 3.68
5257 7007 2.422276 AAATGTTGGAGCGAGCAAAC 57.578 45.000 0.00 0.06 0.00 2.93
5258 7008 1.317613 AATGTTGGAGCGAGCAAACA 58.682 45.000 11.42 11.42 36.98 2.83
5259 7009 0.877071 ATGTTGGAGCGAGCAAACAG 59.123 50.000 13.47 0.00 36.09 3.16
5260 7010 0.463654 TGTTGGAGCGAGCAAACAGT 60.464 50.000 0.00 0.00 0.00 3.55
5261 7011 1.202592 TGTTGGAGCGAGCAAACAGTA 60.203 47.619 0.00 0.00 0.00 2.74
5262 7012 1.461127 GTTGGAGCGAGCAAACAGTAG 59.539 52.381 0.00 0.00 0.00 2.57
5263 7013 0.670546 TGGAGCGAGCAAACAGTAGC 60.671 55.000 0.00 0.00 0.00 3.58
5264 7014 0.390472 GGAGCGAGCAAACAGTAGCT 60.390 55.000 0.18 0.18 45.25 3.32
5270 7020 2.656560 AGCAAACAGTAGCTCCGTAG 57.343 50.000 0.00 0.00 36.00 3.51
5271 7021 2.168496 AGCAAACAGTAGCTCCGTAGA 58.832 47.619 0.00 0.00 36.00 2.59
5272 7022 2.761208 AGCAAACAGTAGCTCCGTAGAT 59.239 45.455 0.00 0.00 36.00 1.98
5273 7023 3.117046 GCAAACAGTAGCTCCGTAGATC 58.883 50.000 0.00 0.00 0.00 2.75
5274 7024 3.707793 CAAACAGTAGCTCCGTAGATCC 58.292 50.000 0.00 0.00 0.00 3.36
5275 7025 3.300239 AACAGTAGCTCCGTAGATCCT 57.700 47.619 0.00 0.00 0.00 3.24
5276 7026 2.577700 ACAGTAGCTCCGTAGATCCTG 58.422 52.381 0.00 0.00 0.00 3.86
5277 7027 1.883275 CAGTAGCTCCGTAGATCCTGG 59.117 57.143 0.00 0.00 0.00 4.45
5278 7028 1.495574 AGTAGCTCCGTAGATCCTGGT 59.504 52.381 0.00 0.00 0.00 4.00
5279 7029 2.709934 AGTAGCTCCGTAGATCCTGGTA 59.290 50.000 0.00 0.00 0.00 3.25
5280 7030 2.982339 AGCTCCGTAGATCCTGGTAT 57.018 50.000 0.00 0.00 0.00 2.73
5281 7031 3.246416 AGCTCCGTAGATCCTGGTATT 57.754 47.619 0.00 0.00 0.00 1.89
5282 7032 3.577919 AGCTCCGTAGATCCTGGTATTT 58.422 45.455 0.00 0.00 0.00 1.40
5283 7033 3.574826 AGCTCCGTAGATCCTGGTATTTC 59.425 47.826 0.00 0.00 0.00 2.17
5284 7034 3.321111 GCTCCGTAGATCCTGGTATTTCA 59.679 47.826 0.00 0.00 0.00 2.69
5285 7035 4.202223 GCTCCGTAGATCCTGGTATTTCAA 60.202 45.833 0.00 0.00 0.00 2.69
5286 7036 5.531122 TCCGTAGATCCTGGTATTTCAAG 57.469 43.478 0.00 0.00 0.00 3.02
5287 7037 4.344102 TCCGTAGATCCTGGTATTTCAAGG 59.656 45.833 0.00 0.00 0.00 3.61
5288 7038 4.344102 CCGTAGATCCTGGTATTTCAAGGA 59.656 45.833 0.00 0.00 0.00 3.36
5289 7039 5.509840 CCGTAGATCCTGGTATTTCAAGGAG 60.510 48.000 0.00 0.00 31.64 3.69
5290 7040 4.429854 AGATCCTGGTATTTCAAGGAGC 57.570 45.455 0.00 0.00 35.52 4.70
5291 7041 2.691409 TCCTGGTATTTCAAGGAGCG 57.309 50.000 0.00 0.00 0.00 5.03
5292 7042 1.209504 TCCTGGTATTTCAAGGAGCGG 59.790 52.381 0.00 0.00 0.00 5.52
5293 7043 1.065418 CCTGGTATTTCAAGGAGCGGT 60.065 52.381 0.00 0.00 0.00 5.68
5294 7044 2.009774 CTGGTATTTCAAGGAGCGGTG 58.990 52.381 0.00 0.00 0.00 4.94
5295 7045 1.339631 TGGTATTTCAAGGAGCGGTGG 60.340 52.381 0.00 0.00 0.00 4.61
5296 7046 1.339727 GGTATTTCAAGGAGCGGTGGT 60.340 52.381 0.00 0.00 0.00 4.16
5297 7047 2.433436 GTATTTCAAGGAGCGGTGGTT 58.567 47.619 0.00 0.00 0.00 3.67
5298 7048 1.995376 ATTTCAAGGAGCGGTGGTTT 58.005 45.000 0.00 0.00 0.00 3.27
5299 7049 1.028905 TTTCAAGGAGCGGTGGTTTG 58.971 50.000 0.00 0.00 0.00 2.93
5300 7050 1.452145 TTCAAGGAGCGGTGGTTTGC 61.452 55.000 0.00 0.00 0.00 3.68
5301 7051 2.597510 AAGGAGCGGTGGTTTGCC 60.598 61.111 0.00 0.00 0.00 4.52
5308 7058 3.666253 GGTGGTTTGCCGAACGGG 61.666 66.667 15.01 0.00 39.22 5.28
5317 7067 3.295800 CCGAACGGGCTCTTAGGT 58.704 61.111 5.25 0.00 0.00 3.08
5318 7068 1.141234 CCGAACGGGCTCTTAGGTC 59.859 63.158 5.25 0.00 0.00 3.85
5319 7069 1.141234 CGAACGGGCTCTTAGGTCC 59.859 63.158 0.00 0.00 0.00 4.46
5320 7070 1.321074 CGAACGGGCTCTTAGGTCCT 61.321 60.000 0.00 0.00 0.00 3.85
5321 7071 0.175989 GAACGGGCTCTTAGGTCCTG 59.824 60.000 0.00 0.00 0.00 3.86
5322 7072 0.544595 AACGGGCTCTTAGGTCCTGT 60.545 55.000 0.00 0.61 40.98 4.00
5323 7073 0.544595 ACGGGCTCTTAGGTCCTGTT 60.545 55.000 0.00 0.00 36.10 3.16
5324 7074 0.175989 CGGGCTCTTAGGTCCTGTTC 59.824 60.000 0.00 0.00 0.00 3.18
5325 7075 0.175989 GGGCTCTTAGGTCCTGTTCG 59.824 60.000 0.00 0.00 0.00 3.95
5326 7076 0.175989 GGCTCTTAGGTCCTGTTCGG 59.824 60.000 0.00 0.00 0.00 4.30
5327 7077 0.175989 GCTCTTAGGTCCTGTTCGGG 59.824 60.000 0.00 0.00 0.00 5.14
5328 7078 1.848652 CTCTTAGGTCCTGTTCGGGA 58.151 55.000 0.00 0.00 0.00 5.14
5329 7079 2.176889 CTCTTAGGTCCTGTTCGGGAA 58.823 52.381 0.00 0.00 37.10 3.97
5330 7080 1.897802 TCTTAGGTCCTGTTCGGGAAC 59.102 52.381 7.58 7.58 43.06 3.62
5343 7093 3.692406 GGAACCGTCCAGCTCCGT 61.692 66.667 0.00 0.00 44.26 4.69
5344 7094 2.126031 GAACCGTCCAGCTCCGTC 60.126 66.667 0.00 0.00 0.00 4.79
5345 7095 3.966026 GAACCGTCCAGCTCCGTCG 62.966 68.421 0.00 0.00 0.00 5.12
5347 7097 3.744719 CCGTCCAGCTCCGTCGAA 61.745 66.667 0.00 0.00 0.00 3.71
5348 7098 2.490217 CGTCCAGCTCCGTCGAAT 59.510 61.111 0.00 0.00 0.00 3.34
5349 7099 1.721664 CCGTCCAGCTCCGTCGAATA 61.722 60.000 0.00 0.00 0.00 1.75
5350 7100 0.311165 CGTCCAGCTCCGTCGAATAT 59.689 55.000 0.00 0.00 0.00 1.28
5351 7101 1.534163 CGTCCAGCTCCGTCGAATATA 59.466 52.381 0.00 0.00 0.00 0.86
5352 7102 2.412977 CGTCCAGCTCCGTCGAATATAG 60.413 54.545 0.00 0.00 0.00 1.31
5353 7103 2.095161 GTCCAGCTCCGTCGAATATAGG 60.095 54.545 0.00 0.00 0.00 2.57
5354 7104 2.160205 CCAGCTCCGTCGAATATAGGA 58.840 52.381 0.00 0.00 0.00 2.94
5358 7108 3.833545 CTCCGTCGAATATAGGAGTGG 57.166 52.381 11.60 0.00 43.82 4.00
5359 7109 3.409570 CTCCGTCGAATATAGGAGTGGA 58.590 50.000 11.60 0.00 43.82 4.02
5360 7110 3.144506 TCCGTCGAATATAGGAGTGGAC 58.855 50.000 0.00 0.00 0.00 4.02
5361 7111 3.184649 CGTCGAATATAGGAGTGGACG 57.815 52.381 0.00 0.00 45.41 4.79
5362 7112 2.095869 CGTCGAATATAGGAGTGGACGG 60.096 54.545 3.02 0.00 46.43 4.79
5363 7113 3.144506 GTCGAATATAGGAGTGGACGGA 58.855 50.000 0.00 0.00 0.00 4.69
5364 7114 3.188873 GTCGAATATAGGAGTGGACGGAG 59.811 52.174 0.00 0.00 0.00 4.63
5365 7115 2.095161 CGAATATAGGAGTGGACGGAGC 60.095 54.545 0.00 0.00 0.00 4.70
5366 7116 1.535833 ATATAGGAGTGGACGGAGCG 58.464 55.000 0.00 0.00 0.00 5.03
5367 7117 1.170919 TATAGGAGTGGACGGAGCGC 61.171 60.000 0.00 0.00 0.00 5.92
5372 7122 4.681978 GTGGACGGAGCGCCACTT 62.682 66.667 7.44 0.00 44.26 3.16
5373 7123 3.936203 TGGACGGAGCGCCACTTT 61.936 61.111 7.44 0.00 30.88 2.66
5374 7124 3.423154 GGACGGAGCGCCACTTTG 61.423 66.667 7.44 0.00 0.00 2.77
5375 7125 3.423154 GACGGAGCGCCACTTTGG 61.423 66.667 7.44 0.00 41.55 3.28
5385 7135 3.558674 CCACTTTGGCTACTCCCAG 57.441 57.895 0.00 0.00 36.00 4.45
5386 7136 0.984230 CCACTTTGGCTACTCCCAGA 59.016 55.000 0.00 0.00 36.00 3.86
5387 7137 1.351017 CCACTTTGGCTACTCCCAGAA 59.649 52.381 0.00 0.00 36.00 3.02
5388 7138 2.224769 CCACTTTGGCTACTCCCAGAAA 60.225 50.000 0.00 0.00 36.00 2.52
5389 7139 3.486383 CACTTTGGCTACTCCCAGAAAA 58.514 45.455 0.00 0.00 36.00 2.29
5390 7140 4.082125 CACTTTGGCTACTCCCAGAAAAT 58.918 43.478 0.00 0.00 36.00 1.82
5391 7141 5.253330 CACTTTGGCTACTCCCAGAAAATA 58.747 41.667 0.00 0.00 36.00 1.40
5392 7142 5.123979 CACTTTGGCTACTCCCAGAAAATAC 59.876 44.000 0.00 0.00 36.00 1.89
5393 7143 4.919774 TTGGCTACTCCCAGAAAATACA 57.080 40.909 0.00 0.00 36.00 2.29
5394 7144 4.216411 TGGCTACTCCCAGAAAATACAC 57.784 45.455 0.00 0.00 0.00 2.90
5395 7145 3.844211 TGGCTACTCCCAGAAAATACACT 59.156 43.478 0.00 0.00 0.00 3.55
5396 7146 5.027460 TGGCTACTCCCAGAAAATACACTA 58.973 41.667 0.00 0.00 0.00 2.74
5397 7147 5.128827 TGGCTACTCCCAGAAAATACACTAG 59.871 44.000 0.00 0.00 0.00 2.57
5398 7148 5.453480 GGCTACTCCCAGAAAATACACTAGG 60.453 48.000 0.00 0.00 0.00 3.02
5399 7149 5.453480 GCTACTCCCAGAAAATACACTAGGG 60.453 48.000 0.00 0.00 36.15 3.53
5400 7150 3.780850 ACTCCCAGAAAATACACTAGGGG 59.219 47.826 0.00 0.00 35.52 4.79
5401 7151 3.120108 TCCCAGAAAATACACTAGGGGG 58.880 50.000 0.00 0.00 35.52 5.40
5402 7152 2.422945 CCCAGAAAATACACTAGGGGGC 60.423 54.545 0.00 0.00 0.00 5.80
5403 7153 2.561569 CAGAAAATACACTAGGGGGCG 58.438 52.381 0.00 0.00 0.00 6.13
5404 7154 1.134189 AGAAAATACACTAGGGGGCGC 60.134 52.381 0.00 0.00 0.00 6.53
5405 7155 0.916809 AAAATACACTAGGGGGCGCT 59.083 50.000 7.64 0.00 0.00 5.92
5406 7156 0.468648 AAATACACTAGGGGGCGCTC 59.531 55.000 7.64 1.18 0.00 5.03
5407 7157 1.408453 AATACACTAGGGGGCGCTCC 61.408 60.000 21.29 21.29 0.00 4.70
5426 7176 2.331098 CTCTAGAGCAGAGCCGCG 59.669 66.667 6.86 0.00 44.34 6.46
5427 7177 3.192954 CTCTAGAGCAGAGCCGCGG 62.193 68.421 24.05 24.05 44.34 6.46
5428 7178 3.212682 CTAGAGCAGAGCCGCGGA 61.213 66.667 33.48 2.57 36.85 5.54
5429 7179 3.192954 CTAGAGCAGAGCCGCGGAG 62.193 68.421 33.48 16.23 36.85 4.63
5470 7220 2.797719 GCTCTTAGTCTAGCGGATTTGC 59.202 50.000 0.00 0.00 0.00 3.68
5479 7229 5.641209 AGTCTAGCGGATTTGCATATTCATC 59.359 40.000 0.00 0.00 37.31 2.92
5589 7345 6.875926 GCACATGGCAAAGTATTTTTCTAG 57.124 37.500 0.00 0.00 43.97 2.43
5592 7348 8.190784 GCACATGGCAAAGTATTTTTCTAGTAT 58.809 33.333 0.00 0.00 43.97 2.12
5619 7375 5.308237 AGGAGTTTGACCTACTGAATGAAGT 59.692 40.000 0.00 0.00 35.84 3.01
5627 7383 8.251750 TGACCTACTGAATGAAGTTTTAATCG 57.748 34.615 0.00 0.00 0.00 3.34
5652 7408 3.440522 ACGAGAACATGATCTGAGAACGA 59.559 43.478 10.61 0.00 0.00 3.85
5675 7431 1.597663 CGTGTGTCAAGGGAAGTTGTC 59.402 52.381 0.00 0.00 0.00 3.18
5687 7443 3.404899 GGAAGTTGTCCGTAAATGTCCA 58.595 45.455 0.00 0.00 36.40 4.02
5688 7444 3.187842 GGAAGTTGTCCGTAAATGTCCAC 59.812 47.826 0.00 0.00 36.40 4.02
5689 7445 2.774687 AGTTGTCCGTAAATGTCCACC 58.225 47.619 0.00 0.00 0.00 4.61
5690 7446 2.105134 AGTTGTCCGTAAATGTCCACCA 59.895 45.455 0.00 0.00 0.00 4.17
5691 7447 2.172851 TGTCCGTAAATGTCCACCAC 57.827 50.000 0.00 0.00 0.00 4.16
5692 7448 1.073177 GTCCGTAAATGTCCACCACG 58.927 55.000 0.00 0.00 0.00 4.94
5693 7449 0.671163 TCCGTAAATGTCCACCACGC 60.671 55.000 0.00 0.00 0.00 5.34
5694 7450 1.418367 CGTAAATGTCCACCACGCG 59.582 57.895 3.53 3.53 0.00 6.01
5695 7451 1.791662 GTAAATGTCCACCACGCGG 59.208 57.895 12.47 0.00 38.77 6.46
5697 7453 0.671163 TAAATGTCCACCACGCGGTC 60.671 55.000 12.47 0.00 44.71 4.79
5698 7454 3.894547 AATGTCCACCACGCGGTCC 62.895 63.158 12.47 0.00 44.71 4.46
5703 7459 4.293648 CACCACGCGGTCCAGACA 62.294 66.667 12.47 0.00 44.71 3.41
5704 7460 3.311110 ACCACGCGGTCCAGACAT 61.311 61.111 12.47 0.00 44.71 3.06
5705 7461 2.815211 CCACGCGGTCCAGACATG 60.815 66.667 12.47 0.00 0.00 3.21
5706 7462 2.048222 CACGCGGTCCAGACATGT 60.048 61.111 12.47 0.00 0.00 3.21
5707 7463 2.094659 CACGCGGTCCAGACATGTC 61.095 63.158 18.47 18.47 0.00 3.06
5708 7464 2.880879 CGCGGTCCAGACATGTCG 60.881 66.667 19.85 14.20 34.09 4.35
5709 7465 2.571757 GCGGTCCAGACATGTCGA 59.428 61.111 19.85 9.62 34.09 4.20
5710 7466 1.517257 GCGGTCCAGACATGTCGAG 60.517 63.158 19.85 15.85 34.09 4.04
5711 7467 1.517257 CGGTCCAGACATGTCGAGC 60.517 63.158 19.85 18.65 34.09 5.03
5712 7468 1.517257 GGTCCAGACATGTCGAGCG 60.517 63.158 19.85 9.91 34.09 5.03
5713 7469 1.517257 GTCCAGACATGTCGAGCGG 60.517 63.158 19.85 17.67 34.09 5.52
5714 7470 1.977009 TCCAGACATGTCGAGCGGT 60.977 57.895 19.85 0.00 34.09 5.68
5715 7471 1.079819 CCAGACATGTCGAGCGGTT 60.080 57.895 19.85 0.00 34.09 4.44
5716 7472 1.078759 CCAGACATGTCGAGCGGTTC 61.079 60.000 19.85 0.00 34.09 3.62
5717 7473 0.388520 CAGACATGTCGAGCGGTTCA 60.389 55.000 19.85 0.00 34.09 3.18
5718 7474 0.317160 AGACATGTCGAGCGGTTCAA 59.683 50.000 19.85 0.00 34.09 2.69
5719 7475 0.438830 GACATGTCGAGCGGTTCAAC 59.561 55.000 10.69 0.00 0.00 3.18
5720 7476 1.282248 ACATGTCGAGCGGTTCAACG 61.282 55.000 0.00 0.00 0.00 4.10
5728 7484 2.355363 CGGTTCAACGCCGTCTCA 60.355 61.111 0.00 0.00 43.84 3.27
5729 7485 1.952133 CGGTTCAACGCCGTCTCAA 60.952 57.895 0.00 0.00 43.84 3.02
5730 7486 1.492319 CGGTTCAACGCCGTCTCAAA 61.492 55.000 0.00 0.00 43.84 2.69
5731 7487 0.872388 GGTTCAACGCCGTCTCAAAT 59.128 50.000 0.00 0.00 0.00 2.32
5732 7488 1.399727 GGTTCAACGCCGTCTCAAATG 60.400 52.381 0.00 0.00 0.00 2.32
5733 7489 1.263217 GTTCAACGCCGTCTCAAATGT 59.737 47.619 0.00 0.00 0.00 2.71
5734 7490 1.144969 TCAACGCCGTCTCAAATGTC 58.855 50.000 0.00 0.00 0.00 3.06
5735 7491 0.165944 CAACGCCGTCTCAAATGTCC 59.834 55.000 0.00 0.00 0.00 4.02
5736 7492 0.250124 AACGCCGTCTCAAATGTCCA 60.250 50.000 0.00 0.00 0.00 4.02
5737 7493 0.036388 ACGCCGTCTCAAATGTCCAT 60.036 50.000 0.00 0.00 0.00 3.41
5738 7494 0.374758 CGCCGTCTCAAATGTCCATG 59.625 55.000 0.00 0.00 0.00 3.66
5739 7495 0.734889 GCCGTCTCAAATGTCCATGG 59.265 55.000 4.97 4.97 0.00 3.66
5740 7496 1.678728 GCCGTCTCAAATGTCCATGGA 60.679 52.381 11.44 11.44 0.00 3.41
5741 7497 2.283298 CCGTCTCAAATGTCCATGGAG 58.717 52.381 16.81 2.66 0.00 3.86
5742 7498 1.667724 CGTCTCAAATGTCCATGGAGC 59.332 52.381 16.81 10.93 0.00 4.70
5743 7499 2.715046 GTCTCAAATGTCCATGGAGCA 58.285 47.619 16.81 16.43 0.00 4.26
5744 7500 2.681848 GTCTCAAATGTCCATGGAGCAG 59.318 50.000 16.81 5.02 0.00 4.24
5745 7501 2.306805 TCTCAAATGTCCATGGAGCAGT 59.693 45.455 16.81 12.73 0.00 4.40
5746 7502 2.681848 CTCAAATGTCCATGGAGCAGTC 59.318 50.000 16.81 3.14 0.00 3.51
5747 7503 1.399440 CAAATGTCCATGGAGCAGTCG 59.601 52.381 16.81 1.44 0.00 4.18
5748 7504 0.745845 AATGTCCATGGAGCAGTCGC 60.746 55.000 16.81 1.46 38.99 5.19
5749 7505 1.902765 ATGTCCATGGAGCAGTCGCA 61.903 55.000 16.81 8.15 42.27 5.10
5750 7506 2.103042 GTCCATGGAGCAGTCGCAC 61.103 63.158 16.81 0.00 42.27 5.34
5751 7507 2.046988 CCATGGAGCAGTCGCACA 60.047 61.111 5.56 0.00 42.27 4.57
5752 7508 1.450848 CCATGGAGCAGTCGCACAT 60.451 57.895 5.56 0.00 42.27 3.21
5753 7509 1.434622 CCATGGAGCAGTCGCACATC 61.435 60.000 5.56 0.00 42.27 3.06
5754 7510 1.153289 ATGGAGCAGTCGCACATCC 60.153 57.895 0.00 0.00 42.27 3.51
5755 7511 2.887568 GGAGCAGTCGCACATCCG 60.888 66.667 0.00 0.00 42.27 4.18
5756 7512 2.887568 GAGCAGTCGCACATCCGG 60.888 66.667 0.00 0.00 42.27 5.14
5757 7513 3.356639 GAGCAGTCGCACATCCGGA 62.357 63.158 6.61 6.61 42.27 5.14
5758 7514 2.202932 GCAGTCGCACATCCGGAT 60.203 61.111 12.38 12.38 38.36 4.18
5759 7515 1.815421 GCAGTCGCACATCCGGATT 60.815 57.895 16.19 3.58 38.36 3.01
5760 7516 1.369091 GCAGTCGCACATCCGGATTT 61.369 55.000 16.19 5.51 38.36 2.17
5761 7517 0.652592 CAGTCGCACATCCGGATTTC 59.347 55.000 16.19 5.74 0.00 2.17
5762 7518 0.249120 AGTCGCACATCCGGATTTCA 59.751 50.000 16.19 0.00 0.00 2.69
5763 7519 1.134401 AGTCGCACATCCGGATTTCAT 60.134 47.619 16.19 0.00 0.00 2.57
5764 7520 1.261619 GTCGCACATCCGGATTTCATC 59.738 52.381 16.19 1.58 0.00 2.92
5765 7521 1.134551 TCGCACATCCGGATTTCATCA 60.135 47.619 16.19 0.00 0.00 3.07
5766 7522 1.670295 CGCACATCCGGATTTCATCAA 59.330 47.619 16.19 0.00 0.00 2.57
5767 7523 2.097304 CGCACATCCGGATTTCATCAAA 59.903 45.455 16.19 0.00 0.00 2.69
5768 7524 3.438360 GCACATCCGGATTTCATCAAAC 58.562 45.455 16.19 0.00 0.00 2.93
5769 7525 3.734902 GCACATCCGGATTTCATCAAACC 60.735 47.826 16.19 0.00 0.00 3.27
5770 7526 2.682856 ACATCCGGATTTCATCAAACCG 59.317 45.455 16.19 0.90 36.62 4.44
5771 7527 1.745232 TCCGGATTTCATCAAACCGG 58.255 50.000 14.40 14.40 46.74 5.28
5774 7530 3.405170 CGGATTTCATCAAACCGGAAG 57.595 47.619 9.46 0.00 34.85 3.46
5775 7531 2.747446 CGGATTTCATCAAACCGGAAGT 59.253 45.455 9.46 0.00 34.85 3.01
5776 7532 3.936453 CGGATTTCATCAAACCGGAAGTA 59.064 43.478 9.46 0.00 34.85 2.24
5777 7533 4.393680 CGGATTTCATCAAACCGGAAGTAA 59.606 41.667 9.46 0.00 34.85 2.24
5778 7534 5.106475 CGGATTTCATCAAACCGGAAGTAAA 60.106 40.000 9.46 0.00 34.85 2.01
5779 7535 6.322491 GGATTTCATCAAACCGGAAGTAAAG 58.678 40.000 9.46 0.00 0.00 1.85
5780 7536 4.759516 TTCATCAAACCGGAAGTAAAGC 57.240 40.909 9.46 0.00 0.00 3.51
5781 7537 4.015872 TCATCAAACCGGAAGTAAAGCT 57.984 40.909 9.46 0.00 0.00 3.74
5782 7538 3.751175 TCATCAAACCGGAAGTAAAGCTG 59.249 43.478 9.46 0.00 0.00 4.24
5783 7539 2.500229 TCAAACCGGAAGTAAAGCTGG 58.500 47.619 9.46 0.00 36.60 4.85
5784 7540 1.068541 CAAACCGGAAGTAAAGCTGGC 60.069 52.381 9.46 0.00 33.74 4.85
5785 7541 0.109723 AACCGGAAGTAAAGCTGGCA 59.890 50.000 9.46 0.00 33.74 4.92
5786 7542 0.321653 ACCGGAAGTAAAGCTGGCAG 60.322 55.000 9.46 10.94 33.74 4.85
5787 7543 0.036388 CCGGAAGTAAAGCTGGCAGA 60.036 55.000 20.86 0.00 0.00 4.26
5788 7544 1.363744 CGGAAGTAAAGCTGGCAGAG 58.636 55.000 20.86 0.00 0.00 3.35
5789 7545 1.743996 GGAAGTAAAGCTGGCAGAGG 58.256 55.000 20.86 0.00 0.00 3.69
5790 7546 1.003696 GGAAGTAAAGCTGGCAGAGGT 59.996 52.381 20.86 3.97 0.00 3.85
5791 7547 2.553247 GGAAGTAAAGCTGGCAGAGGTT 60.553 50.000 20.86 10.63 44.54 3.50
5795 7551 3.336122 AAGCTGGCAGAGGTTTGAG 57.664 52.632 20.86 0.00 39.46 3.02
5796 7552 0.251077 AAGCTGGCAGAGGTTTGAGG 60.251 55.000 20.86 0.00 39.46 3.86
5797 7553 1.676967 GCTGGCAGAGGTTTGAGGG 60.677 63.158 20.86 0.00 0.00 4.30
5798 7554 2.069776 CTGGCAGAGGTTTGAGGGA 58.930 57.895 9.42 0.00 0.00 4.20
5799 7555 0.035630 CTGGCAGAGGTTTGAGGGAG 60.036 60.000 9.42 0.00 0.00 4.30
5800 7556 0.768221 TGGCAGAGGTTTGAGGGAGT 60.768 55.000 0.00 0.00 0.00 3.85
5801 7557 0.035915 GGCAGAGGTTTGAGGGAGTC 60.036 60.000 0.00 0.00 0.00 3.36
5802 7558 0.035915 GCAGAGGTTTGAGGGAGTCC 60.036 60.000 0.00 0.00 0.00 3.85
5803 7559 1.352083 CAGAGGTTTGAGGGAGTCCA 58.648 55.000 12.30 0.00 34.83 4.02
5804 7560 1.277557 CAGAGGTTTGAGGGAGTCCAG 59.722 57.143 12.30 0.00 34.83 3.86
5805 7561 1.150135 AGAGGTTTGAGGGAGTCCAGA 59.850 52.381 12.30 0.00 34.83 3.86
5806 7562 1.276705 GAGGTTTGAGGGAGTCCAGAC 59.723 57.143 12.30 2.02 34.83 3.51
5807 7563 1.056660 GGTTTGAGGGAGTCCAGACA 58.943 55.000 12.30 4.81 34.83 3.41
5808 7564 1.002544 GGTTTGAGGGAGTCCAGACAG 59.997 57.143 12.30 0.00 34.83 3.51
5809 7565 0.687354 TTTGAGGGAGTCCAGACAGC 59.313 55.000 12.30 0.00 34.83 4.40
5810 7566 1.194781 TTGAGGGAGTCCAGACAGCC 61.195 60.000 12.30 1.18 34.83 4.85
5811 7567 2.681778 AGGGAGTCCAGACAGCCG 60.682 66.667 12.30 0.00 34.83 5.52
5812 7568 4.459089 GGGAGTCCAGACAGCCGC 62.459 72.222 12.30 0.00 0.00 6.53
5813 7569 4.459089 GGAGTCCAGACAGCCGCC 62.459 72.222 3.60 0.00 0.00 6.13
5814 7570 4.803426 GAGTCCAGACAGCCGCCG 62.803 72.222 0.00 0.00 0.00 6.46
5816 7572 3.755628 GTCCAGACAGCCGCCGTA 61.756 66.667 0.00 0.00 0.00 4.02
5817 7573 3.449227 TCCAGACAGCCGCCGTAG 61.449 66.667 0.00 0.00 0.00 3.51
5818 7574 3.449227 CCAGACAGCCGCCGTAGA 61.449 66.667 0.00 0.00 0.00 2.59
5819 7575 2.571757 CAGACAGCCGCCGTAGAA 59.428 61.111 0.00 0.00 0.00 2.10
5820 7576 1.805945 CAGACAGCCGCCGTAGAAC 60.806 63.158 0.00 0.00 0.00 3.01
5821 7577 2.260434 GACAGCCGCCGTAGAACA 59.740 61.111 0.00 0.00 0.00 3.18
5822 7578 2.048503 ACAGCCGCCGTAGAACAC 60.049 61.111 0.00 0.00 0.00 3.32
5823 7579 2.813908 CAGCCGCCGTAGAACACC 60.814 66.667 0.00 0.00 0.00 4.16
5824 7580 4.430765 AGCCGCCGTAGAACACCG 62.431 66.667 0.00 0.00 0.00 4.94
5825 7581 4.424566 GCCGCCGTAGAACACCGA 62.425 66.667 0.00 0.00 0.00 4.69
5826 7582 2.259204 CCGCCGTAGAACACCGAA 59.741 61.111 0.00 0.00 0.00 4.30
5827 7583 2.090524 CCGCCGTAGAACACCGAAC 61.091 63.158 0.00 0.00 0.00 3.95
5828 7584 1.372004 CGCCGTAGAACACCGAACA 60.372 57.895 0.00 0.00 0.00 3.18
5829 7585 1.611592 CGCCGTAGAACACCGAACAC 61.612 60.000 0.00 0.00 0.00 3.32
5830 7586 1.287041 GCCGTAGAACACCGAACACC 61.287 60.000 0.00 0.00 0.00 4.16
5831 7587 0.316204 CCGTAGAACACCGAACACCT 59.684 55.000 0.00 0.00 0.00 4.00
5832 7588 1.415374 CGTAGAACACCGAACACCTG 58.585 55.000 0.00 0.00 0.00 4.00
5833 7589 1.269413 CGTAGAACACCGAACACCTGT 60.269 52.381 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.651975 TGTTGTTGGGGAACGTAATAATTT 57.348 33.333 0.00 0.00 0.00 1.82
1 2 5.336134 GCTGTTGTTGGGGAACGTAATAATT 60.336 40.000 0.00 0.00 0.00 1.40
2 3 4.157105 GCTGTTGTTGGGGAACGTAATAAT 59.843 41.667 0.00 0.00 0.00 1.28
3 4 3.502979 GCTGTTGTTGGGGAACGTAATAA 59.497 43.478 0.00 0.00 0.00 1.40
4 5 3.075884 GCTGTTGTTGGGGAACGTAATA 58.924 45.455 0.00 0.00 0.00 0.98
5 6 1.883926 GCTGTTGTTGGGGAACGTAAT 59.116 47.619 0.00 0.00 0.00 1.89
6 7 1.310904 GCTGTTGTTGGGGAACGTAA 58.689 50.000 0.00 0.00 0.00 3.18
7 8 0.881159 CGCTGTTGTTGGGGAACGTA 60.881 55.000 0.00 0.00 0.00 3.57
8 9 2.184167 CGCTGTTGTTGGGGAACGT 61.184 57.895 0.00 0.00 0.00 3.99
9 10 1.890041 TCGCTGTTGTTGGGGAACG 60.890 57.895 0.00 0.00 0.00 3.95
10 11 1.652563 GTCGCTGTTGTTGGGGAAC 59.347 57.895 0.00 0.00 0.00 3.62
11 12 1.890041 CGTCGCTGTTGTTGGGGAA 60.890 57.895 0.00 0.00 0.00 3.97
12 13 2.280524 CGTCGCTGTTGTTGGGGA 60.281 61.111 0.00 0.00 0.00 4.81
13 14 4.025401 GCGTCGCTGTTGTTGGGG 62.025 66.667 10.68 0.00 0.00 4.96
14 15 4.025401 GGCGTCGCTGTTGTTGGG 62.025 66.667 18.11 0.00 0.00 4.12
15 16 4.368808 CGGCGTCGCTGTTGTTGG 62.369 66.667 18.08 0.00 0.00 3.77
16 17 2.170260 ATTCGGCGTCGCTGTTGTTG 62.170 55.000 24.58 3.42 36.18 3.33
17 18 1.503818 AATTCGGCGTCGCTGTTGTT 61.504 50.000 24.58 14.81 36.18 2.83
18 19 1.897398 GAATTCGGCGTCGCTGTTGT 61.897 55.000 24.58 11.31 36.18 3.32
254 255 3.941657 GACTGCTCGGGTCTGTGCC 62.942 68.421 2.02 0.00 0.00 5.01
266 267 1.621992 TCTCTTCACGAAGGACTGCT 58.378 50.000 6.94 0.00 38.88 4.24
269 270 2.559231 GGTCTTCTCTTCACGAAGGACT 59.441 50.000 6.94 0.00 38.66 3.85
297 298 3.124921 CATCAACGCCGACCACCC 61.125 66.667 0.00 0.00 0.00 4.61
369 370 3.072622 AGGAAAGTCAGGTAGGTGTTTCC 59.927 47.826 3.88 3.88 42.14 3.13
378 379 0.984230 CCCAGCAGGAAAGTCAGGTA 59.016 55.000 0.00 0.00 38.24 3.08
384 385 4.351054 CCCGCCCAGCAGGAAAGT 62.351 66.667 0.00 0.00 38.24 2.66
515 537 2.340078 GCATCATCGCTCGGGCTA 59.660 61.111 5.36 0.00 36.09 3.93
672 694 3.255725 TCGAATGAAAAGTTCGGCGTAT 58.744 40.909 6.85 0.00 46.14 3.06
726 750 1.665679 CGCTCACAAAATAGACGCCAT 59.334 47.619 0.00 0.00 0.00 4.40
823 852 1.173444 AACCGGCGCTAGATCGATCT 61.173 55.000 29.58 29.58 40.86 2.75
826 855 2.719979 GAACCGGCGCTAGATCGA 59.280 61.111 7.64 0.00 0.00 3.59
1146 1180 1.371558 GGAGAACTTGGTGGCGACT 59.628 57.895 0.00 0.00 0.00 4.18
1244 1280 4.436998 GGGGTCAGACGACAGGCG 62.437 72.222 0.00 0.00 44.54 5.52
1245 1281 2.508586 GAAGGGGTCAGACGACAGGC 62.509 65.000 0.00 0.00 44.54 4.85
1341 2737 2.035626 TTGGTAGGCAAGGGCAGC 59.964 61.111 0.00 0.00 43.71 5.25
1359 2755 1.665169 GAAGCTAGCAGCAAGAAGAGC 59.335 52.381 18.83 0.00 45.56 4.09
1360 2756 1.925847 CGAAGCTAGCAGCAAGAAGAG 59.074 52.381 18.83 0.00 45.56 2.85
1364 2760 0.321671 AACCGAAGCTAGCAGCAAGA 59.678 50.000 18.83 0.00 45.56 3.02
1365 2761 0.723981 GAACCGAAGCTAGCAGCAAG 59.276 55.000 18.83 3.86 45.56 4.01
1399 2795 5.860611 TGAGACTCATTAGGGTTTCGAAAA 58.139 37.500 13.10 0.00 0.00 2.29
1454 2852 3.975168 ACCGCCTAGTACAAATTCTGT 57.025 42.857 0.00 0.22 42.47 3.41
1462 2860 3.962063 TCAATCCATAACCGCCTAGTACA 59.038 43.478 0.00 0.00 0.00 2.90
1466 2864 3.753294 ACTCAATCCATAACCGCCTAG 57.247 47.619 0.00 0.00 0.00 3.02
2144 3753 5.289193 CCAAACTACAATATGCAATGCACAC 59.711 40.000 11.23 0.00 43.04 3.82
2145 3754 5.409211 CCAAACTACAATATGCAATGCACA 58.591 37.500 11.23 0.00 43.04 4.57
2146 3755 4.268405 GCCAAACTACAATATGCAATGCAC 59.732 41.667 11.23 0.00 43.04 4.57
2147 3756 4.431809 GCCAAACTACAATATGCAATGCA 58.568 39.130 11.44 11.44 44.86 3.96
2148 3757 3.486841 CGCCAAACTACAATATGCAATGC 59.513 43.478 0.00 0.00 0.00 3.56
2149 3758 4.043750 CCGCCAAACTACAATATGCAATG 58.956 43.478 0.00 0.00 0.00 2.82
2150 3759 3.699038 ACCGCCAAACTACAATATGCAAT 59.301 39.130 0.00 0.00 0.00 3.56
2151 3760 3.085533 ACCGCCAAACTACAATATGCAA 58.914 40.909 0.00 0.00 0.00 4.08
2152 3761 2.717390 ACCGCCAAACTACAATATGCA 58.283 42.857 0.00 0.00 0.00 3.96
2153 3762 3.002965 GGTACCGCCAAACTACAATATGC 59.997 47.826 0.00 0.00 37.17 3.14
2154 3763 4.272504 CAGGTACCGCCAAACTACAATATG 59.727 45.833 6.18 0.00 40.61 1.78
2155 3764 4.080751 ACAGGTACCGCCAAACTACAATAT 60.081 41.667 6.18 0.00 40.61 1.28
2156 3765 3.261390 ACAGGTACCGCCAAACTACAATA 59.739 43.478 6.18 0.00 40.61 1.90
2157 3766 2.039348 ACAGGTACCGCCAAACTACAAT 59.961 45.455 6.18 0.00 40.61 2.71
2158 3767 1.417145 ACAGGTACCGCCAAACTACAA 59.583 47.619 6.18 0.00 40.61 2.41
2159 3768 1.050204 ACAGGTACCGCCAAACTACA 58.950 50.000 6.18 0.00 40.61 2.74
2160 3769 2.174363 AACAGGTACCGCCAAACTAC 57.826 50.000 6.18 0.00 40.61 2.73
2161 3770 2.879646 CAAAACAGGTACCGCCAAACTA 59.120 45.455 6.18 0.00 40.61 2.24
2162 3771 1.679153 CAAAACAGGTACCGCCAAACT 59.321 47.619 6.18 0.00 40.61 2.66
2228 3837 0.392193 CCATGACTGTGACAGGGAGC 60.392 60.000 17.92 3.99 40.97 4.70
2239 3848 7.500227 ACTGTTATGGATCATTTACCATGACTG 59.500 37.037 18.44 18.44 46.34 3.51
2240 3849 7.577303 ACTGTTATGGATCATTTACCATGACT 58.423 34.615 17.29 1.65 46.34 3.41
2246 3855 6.262944 TGCATGACTGTTATGGATCATTTACC 59.737 38.462 13.55 0.00 29.25 2.85
2267 3876 6.839124 TTACCAGAGAATGATTTTGTGCAT 57.161 33.333 0.00 0.00 0.00 3.96
2407 4053 6.949352 ACAGATTGAAATATTTCAGCCGAT 57.051 33.333 25.58 18.26 46.68 4.18
2480 4126 6.114187 TCTATGTGCAATAACCATCTAGGG 57.886 41.667 0.00 0.00 43.89 3.53
2507 4153 1.605710 CGCATGGGCTAGAAATCTTGG 59.394 52.381 0.00 0.00 38.10 3.61
2509 4155 3.144506 CATCGCATGGGCTAGAAATCTT 58.855 45.455 4.59 0.00 38.10 2.40
3948 5673 1.290134 GGCTAGGCCCCTAATATGCT 58.710 55.000 4.61 0.00 44.06 3.79
4189 5918 4.530857 GAGGGATGGCGTGGTCGG 62.531 72.222 0.00 0.00 37.56 4.79
4788 6530 1.264288 GCACCAGAAACCTTGAAGTCG 59.736 52.381 0.00 0.00 0.00 4.18
5022 6771 2.872245 ACACACCTCTTCATCAAACGTG 59.128 45.455 0.00 0.00 0.00 4.49
5023 6772 3.194005 ACACACCTCTTCATCAAACGT 57.806 42.857 0.00 0.00 0.00 3.99
5038 6788 1.492319 TTACCTGCACGCGAACACAC 61.492 55.000 15.93 0.00 0.00 3.82
5043 6793 0.319986 TCACATTACCTGCACGCGAA 60.320 50.000 15.93 0.00 0.00 4.70
5059 6809 2.029838 AATCACCCGCTCATTCTCAC 57.970 50.000 0.00 0.00 0.00 3.51
5066 6816 3.013921 GGACAAAATAATCACCCGCTCA 58.986 45.455 0.00 0.00 0.00 4.26
5076 6826 4.092968 GCGACAACGAGAGGACAAAATAAT 59.907 41.667 0.00 0.00 42.66 1.28
5111 6861 6.768381 TGCGTATGTTATATGATCCAAAACCA 59.232 34.615 0.00 0.00 0.00 3.67
5114 6864 8.846943 ATCTGCGTATGTTATATGATCCAAAA 57.153 30.769 0.00 0.00 0.00 2.44
5115 6865 8.720562 CAATCTGCGTATGTTATATGATCCAAA 58.279 33.333 0.00 0.00 0.00 3.28
5121 6871 7.926018 AGTGTTCAATCTGCGTATGTTATATGA 59.074 33.333 0.00 0.00 0.00 2.15
5135 6885 7.094634 ACCAGCAAATTACTAGTGTTCAATCTG 60.095 37.037 5.39 4.95 0.00 2.90
5139 6889 6.952773 AACCAGCAAATTACTAGTGTTCAA 57.047 33.333 5.39 0.00 0.00 2.69
5140 6890 7.221450 ACTAACCAGCAAATTACTAGTGTTCA 58.779 34.615 5.39 0.00 0.00 3.18
5141 6891 7.603024 AGACTAACCAGCAAATTACTAGTGTTC 59.397 37.037 5.39 0.00 0.00 3.18
5190 6940 0.611714 GGACTCCGAACAGGCCTTAA 59.388 55.000 0.00 0.00 38.78 1.85
5191 6941 1.262640 GGGACTCCGAACAGGCCTTA 61.263 60.000 0.00 0.00 42.12 2.69
5192 6942 2.593956 GGGACTCCGAACAGGCCTT 61.594 63.158 0.00 0.00 42.12 4.35
5194 6944 3.003763 AGGGACTCCGAACAGGCC 61.004 66.667 0.00 0.00 41.65 5.19
5215 6965 3.127352 CTACTGCTCGGTCCGCTCC 62.127 68.421 6.34 0.00 0.00 4.70
5216 6966 1.448922 ATCTACTGCTCGGTCCGCTC 61.449 60.000 6.34 0.69 0.00 5.03
5217 6967 1.038130 AATCTACTGCTCGGTCCGCT 61.038 55.000 6.34 0.00 0.00 5.52
5218 6968 0.666913 TAATCTACTGCTCGGTCCGC 59.333 55.000 6.34 0.00 0.00 5.54
5219 6969 3.431922 TTTAATCTACTGCTCGGTCCG 57.568 47.619 4.39 4.39 0.00 4.79
5220 6970 5.116882 ACATTTTAATCTACTGCTCGGTCC 58.883 41.667 0.00 0.00 0.00 4.46
5221 6971 6.456988 CCAACATTTTAATCTACTGCTCGGTC 60.457 42.308 0.00 0.00 0.00 4.79
5222 6972 5.354234 CCAACATTTTAATCTACTGCTCGGT 59.646 40.000 0.00 0.00 0.00 4.69
5223 6973 5.584649 TCCAACATTTTAATCTACTGCTCGG 59.415 40.000 0.00 0.00 0.00 4.63
5224 6974 6.662414 TCCAACATTTTAATCTACTGCTCG 57.338 37.500 0.00 0.00 0.00 5.03
5225 6975 6.490534 GCTCCAACATTTTAATCTACTGCTC 58.509 40.000 0.00 0.00 0.00 4.26
5226 6976 5.065218 CGCTCCAACATTTTAATCTACTGCT 59.935 40.000 0.00 0.00 0.00 4.24
5227 6977 5.064707 TCGCTCCAACATTTTAATCTACTGC 59.935 40.000 0.00 0.00 0.00 4.40
5228 6978 6.662414 TCGCTCCAACATTTTAATCTACTG 57.338 37.500 0.00 0.00 0.00 2.74
5229 6979 5.294552 GCTCGCTCCAACATTTTAATCTACT 59.705 40.000 0.00 0.00 0.00 2.57
5230 6980 5.064707 TGCTCGCTCCAACATTTTAATCTAC 59.935 40.000 0.00 0.00 0.00 2.59
5231 6981 5.182487 TGCTCGCTCCAACATTTTAATCTA 58.818 37.500 0.00 0.00 0.00 1.98
5232 6982 4.009675 TGCTCGCTCCAACATTTTAATCT 58.990 39.130 0.00 0.00 0.00 2.40
5233 6983 4.355543 TGCTCGCTCCAACATTTTAATC 57.644 40.909 0.00 0.00 0.00 1.75
5234 6984 4.782019 TTGCTCGCTCCAACATTTTAAT 57.218 36.364 0.00 0.00 0.00 1.40
5235 6985 4.202060 TGTTTGCTCGCTCCAACATTTTAA 60.202 37.500 0.00 0.00 0.00 1.52
5236 6986 3.316588 TGTTTGCTCGCTCCAACATTTTA 59.683 39.130 0.00 0.00 0.00 1.52
5237 6987 2.100584 TGTTTGCTCGCTCCAACATTTT 59.899 40.909 0.00 0.00 0.00 1.82
5238 6988 1.680735 TGTTTGCTCGCTCCAACATTT 59.319 42.857 0.00 0.00 0.00 2.32
5239 6989 1.267806 CTGTTTGCTCGCTCCAACATT 59.732 47.619 0.00 0.00 0.00 2.71
5240 6990 0.877071 CTGTTTGCTCGCTCCAACAT 59.123 50.000 0.00 0.00 0.00 2.71
5241 6991 0.463654 ACTGTTTGCTCGCTCCAACA 60.464 50.000 0.00 0.00 0.00 3.33
5242 6992 1.461127 CTACTGTTTGCTCGCTCCAAC 59.539 52.381 0.00 0.00 0.00 3.77
5243 6993 1.795768 CTACTGTTTGCTCGCTCCAA 58.204 50.000 0.00 0.00 0.00 3.53
5244 6994 0.670546 GCTACTGTTTGCTCGCTCCA 60.671 55.000 0.00 0.00 0.00 3.86
5245 6995 0.390472 AGCTACTGTTTGCTCGCTCC 60.390 55.000 2.80 0.00 33.90 4.70
5246 6996 0.995728 GAGCTACTGTTTGCTCGCTC 59.004 55.000 15.86 0.00 44.72 5.03
5247 6997 3.129792 GAGCTACTGTTTGCTCGCT 57.870 52.632 15.86 0.00 44.72 4.93
5251 7001 2.168496 TCTACGGAGCTACTGTTTGCT 58.832 47.619 7.53 7.53 42.82 3.91
5252 7002 2.649331 TCTACGGAGCTACTGTTTGC 57.351 50.000 0.00 0.00 39.10 3.68
5253 7003 3.381908 AGGATCTACGGAGCTACTGTTTG 59.618 47.826 0.00 0.00 39.10 2.93
5254 7004 3.381908 CAGGATCTACGGAGCTACTGTTT 59.618 47.826 2.25 0.00 39.10 2.83
5255 7005 2.952978 CAGGATCTACGGAGCTACTGTT 59.047 50.000 2.25 0.00 39.10 3.16
5256 7006 2.577700 CAGGATCTACGGAGCTACTGT 58.422 52.381 2.25 0.00 41.44 3.55
5257 7007 1.883275 CCAGGATCTACGGAGCTACTG 59.117 57.143 3.51 3.51 0.00 2.74
5258 7008 1.495574 ACCAGGATCTACGGAGCTACT 59.504 52.381 0.00 0.00 0.00 2.57
5259 7009 1.984066 ACCAGGATCTACGGAGCTAC 58.016 55.000 0.00 0.00 0.00 3.58
5260 7010 4.383931 AATACCAGGATCTACGGAGCTA 57.616 45.455 0.00 0.00 0.00 3.32
5261 7011 2.982339 ATACCAGGATCTACGGAGCT 57.018 50.000 0.00 0.00 0.00 4.09
5262 7012 3.321111 TGAAATACCAGGATCTACGGAGC 59.679 47.826 0.00 0.00 0.00 4.70
5263 7013 5.509840 CCTTGAAATACCAGGATCTACGGAG 60.510 48.000 0.00 0.00 0.00 4.63
5264 7014 4.344102 CCTTGAAATACCAGGATCTACGGA 59.656 45.833 0.00 0.00 0.00 4.69
5265 7015 4.344102 TCCTTGAAATACCAGGATCTACGG 59.656 45.833 0.00 0.00 0.00 4.02
5266 7016 5.531122 TCCTTGAAATACCAGGATCTACG 57.469 43.478 0.00 0.00 0.00 3.51
5267 7017 5.301555 GCTCCTTGAAATACCAGGATCTAC 58.698 45.833 0.00 0.00 0.00 2.59
5268 7018 4.039245 CGCTCCTTGAAATACCAGGATCTA 59.961 45.833 0.00 0.00 0.00 1.98
5269 7019 3.181461 CGCTCCTTGAAATACCAGGATCT 60.181 47.826 0.00 0.00 0.00 2.75
5270 7020 3.134458 CGCTCCTTGAAATACCAGGATC 58.866 50.000 0.00 0.00 0.00 3.36
5271 7021 2.158755 CCGCTCCTTGAAATACCAGGAT 60.159 50.000 0.00 0.00 0.00 3.24
5272 7022 1.209504 CCGCTCCTTGAAATACCAGGA 59.790 52.381 0.00 0.00 0.00 3.86
5273 7023 1.065418 ACCGCTCCTTGAAATACCAGG 60.065 52.381 0.00 0.00 0.00 4.45
5274 7024 2.009774 CACCGCTCCTTGAAATACCAG 58.990 52.381 0.00 0.00 0.00 4.00
5275 7025 1.339631 CCACCGCTCCTTGAAATACCA 60.340 52.381 0.00 0.00 0.00 3.25
5276 7026 1.339727 ACCACCGCTCCTTGAAATACC 60.340 52.381 0.00 0.00 0.00 2.73
5277 7027 2.109425 ACCACCGCTCCTTGAAATAC 57.891 50.000 0.00 0.00 0.00 1.89
5278 7028 2.817258 CAAACCACCGCTCCTTGAAATA 59.183 45.455 0.00 0.00 0.00 1.40
5279 7029 1.613437 CAAACCACCGCTCCTTGAAAT 59.387 47.619 0.00 0.00 0.00 2.17
5280 7030 1.028905 CAAACCACCGCTCCTTGAAA 58.971 50.000 0.00 0.00 0.00 2.69
5281 7031 1.452145 GCAAACCACCGCTCCTTGAA 61.452 55.000 0.00 0.00 0.00 2.69
5282 7032 1.896660 GCAAACCACCGCTCCTTGA 60.897 57.895 0.00 0.00 0.00 3.02
5283 7033 2.644992 GCAAACCACCGCTCCTTG 59.355 61.111 0.00 0.00 0.00 3.61
5284 7034 2.597510 GGCAAACCACCGCTCCTT 60.598 61.111 0.00 0.00 35.26 3.36
5291 7041 3.666253 CCCGTTCGGCAAACCACC 61.666 66.667 5.66 0.00 34.11 4.61
5300 7050 1.141234 GACCTAAGAGCCCGTTCGG 59.859 63.158 4.08 4.08 0.00 4.30
5301 7051 1.141234 GGACCTAAGAGCCCGTTCG 59.859 63.158 0.00 0.00 0.00 3.95
5302 7052 0.175989 CAGGACCTAAGAGCCCGTTC 59.824 60.000 0.00 0.00 0.00 3.95
5303 7053 0.544595 ACAGGACCTAAGAGCCCGTT 60.545 55.000 0.00 0.00 0.00 4.44
5304 7054 0.544595 AACAGGACCTAAGAGCCCGT 60.545 55.000 0.00 0.00 0.00 5.28
5305 7055 0.175989 GAACAGGACCTAAGAGCCCG 59.824 60.000 0.00 0.00 0.00 6.13
5306 7056 0.175989 CGAACAGGACCTAAGAGCCC 59.824 60.000 0.00 0.00 0.00 5.19
5307 7057 0.175989 CCGAACAGGACCTAAGAGCC 59.824 60.000 0.00 0.00 45.00 4.70
5308 7058 0.175989 CCCGAACAGGACCTAAGAGC 59.824 60.000 0.00 0.00 45.00 4.09
5309 7059 1.848652 TCCCGAACAGGACCTAAGAG 58.151 55.000 0.00 0.00 45.00 2.85
5310 7060 1.897802 GTTCCCGAACAGGACCTAAGA 59.102 52.381 0.00 0.00 45.00 2.10
5311 7061 1.066358 GGTTCCCGAACAGGACCTAAG 60.066 57.143 9.65 0.00 45.00 2.18
5312 7062 0.978907 GGTTCCCGAACAGGACCTAA 59.021 55.000 9.65 0.00 45.00 2.69
5313 7063 2.674958 GGTTCCCGAACAGGACCTA 58.325 57.895 9.65 0.00 45.00 3.08
5314 7064 3.479979 GGTTCCCGAACAGGACCT 58.520 61.111 9.65 0.00 45.00 3.85
5325 7075 4.452733 CGGAGCTGGACGGTTCCC 62.453 72.222 8.23 0.00 42.01 3.97
5326 7076 3.644399 GACGGAGCTGGACGGTTCC 62.644 68.421 0.00 4.13 43.19 3.62
5327 7077 2.126031 GACGGAGCTGGACGGTTC 60.126 66.667 0.00 0.00 0.00 3.62
5328 7078 4.052229 CGACGGAGCTGGACGGTT 62.052 66.667 0.00 0.00 0.00 4.44
5330 7080 1.721664 TATTCGACGGAGCTGGACGG 61.722 60.000 0.00 0.00 0.00 4.79
5331 7081 0.311165 ATATTCGACGGAGCTGGACG 59.689 55.000 0.00 0.00 0.00 4.79
5332 7082 2.095161 CCTATATTCGACGGAGCTGGAC 60.095 54.545 0.00 0.00 0.00 4.02
5333 7083 2.160205 CCTATATTCGACGGAGCTGGA 58.840 52.381 0.00 0.00 0.00 3.86
5334 7084 2.160205 TCCTATATTCGACGGAGCTGG 58.840 52.381 0.00 0.00 0.00 4.85
5335 7085 2.814919 ACTCCTATATTCGACGGAGCTG 59.185 50.000 0.00 0.00 45.41 4.24
5336 7086 2.814919 CACTCCTATATTCGACGGAGCT 59.185 50.000 11.58 0.00 45.41 4.09
5337 7087 2.095161 CCACTCCTATATTCGACGGAGC 60.095 54.545 11.58 0.00 45.41 4.70
5338 7088 3.188873 GTCCACTCCTATATTCGACGGAG 59.811 52.174 10.57 10.57 46.59 4.63
5339 7089 3.144506 GTCCACTCCTATATTCGACGGA 58.855 50.000 0.00 0.00 0.00 4.69
5340 7090 2.095869 CGTCCACTCCTATATTCGACGG 60.096 54.545 0.00 0.00 38.30 4.79
5341 7091 2.095869 CCGTCCACTCCTATATTCGACG 60.096 54.545 0.00 0.00 40.83 5.12
5342 7092 3.144506 TCCGTCCACTCCTATATTCGAC 58.855 50.000 0.00 0.00 0.00 4.20
5343 7093 3.409570 CTCCGTCCACTCCTATATTCGA 58.590 50.000 0.00 0.00 0.00 3.71
5344 7094 2.095161 GCTCCGTCCACTCCTATATTCG 60.095 54.545 0.00 0.00 0.00 3.34
5345 7095 2.095161 CGCTCCGTCCACTCCTATATTC 60.095 54.545 0.00 0.00 0.00 1.75
5346 7096 1.887198 CGCTCCGTCCACTCCTATATT 59.113 52.381 0.00 0.00 0.00 1.28
5347 7097 1.535833 CGCTCCGTCCACTCCTATAT 58.464 55.000 0.00 0.00 0.00 0.86
5348 7098 1.170919 GCGCTCCGTCCACTCCTATA 61.171 60.000 0.00 0.00 0.00 1.31
5349 7099 2.491022 GCGCTCCGTCCACTCCTAT 61.491 63.158 0.00 0.00 0.00 2.57
5350 7100 3.138798 GCGCTCCGTCCACTCCTA 61.139 66.667 0.00 0.00 0.00 2.94
5355 7105 4.681978 AAGTGGCGCTCCGTCCAC 62.682 66.667 7.64 17.32 46.21 4.02
5356 7106 3.936203 AAAGTGGCGCTCCGTCCA 61.936 61.111 7.64 0.00 32.67 4.02
5357 7107 3.423154 CAAAGTGGCGCTCCGTCC 61.423 66.667 7.64 0.00 34.14 4.79
5358 7108 3.423154 CCAAAGTGGCGCTCCGTC 61.423 66.667 7.64 0.00 34.14 4.79
5367 7117 0.984230 TCTGGGAGTAGCCAAAGTGG 59.016 55.000 0.00 0.00 41.55 4.00
5368 7118 2.859165 TTCTGGGAGTAGCCAAAGTG 57.141 50.000 0.00 0.00 38.95 3.16
5369 7119 3.876309 TTTTCTGGGAGTAGCCAAAGT 57.124 42.857 0.00 0.00 38.95 2.66
5370 7120 5.123979 GTGTATTTTCTGGGAGTAGCCAAAG 59.876 44.000 0.00 0.00 38.95 2.77
5371 7121 5.007682 GTGTATTTTCTGGGAGTAGCCAAA 58.992 41.667 0.00 0.00 38.95 3.28
5372 7122 4.288626 AGTGTATTTTCTGGGAGTAGCCAA 59.711 41.667 0.00 0.00 38.95 4.52
5373 7123 3.844211 AGTGTATTTTCTGGGAGTAGCCA 59.156 43.478 0.00 0.00 38.95 4.75
5374 7124 4.489306 AGTGTATTTTCTGGGAGTAGCC 57.511 45.455 0.00 0.00 0.00 3.93
5375 7125 5.453480 CCCTAGTGTATTTTCTGGGAGTAGC 60.453 48.000 0.00 0.00 34.85 3.58
5376 7126 5.070580 CCCCTAGTGTATTTTCTGGGAGTAG 59.929 48.000 0.00 0.00 34.85 2.57
5377 7127 4.966805 CCCCTAGTGTATTTTCTGGGAGTA 59.033 45.833 0.00 0.00 34.85 2.59
5378 7128 3.780850 CCCCTAGTGTATTTTCTGGGAGT 59.219 47.826 0.00 0.00 34.85 3.85
5379 7129 3.136626 CCCCCTAGTGTATTTTCTGGGAG 59.863 52.174 0.00 0.00 34.85 4.30
5380 7130 3.120108 CCCCCTAGTGTATTTTCTGGGA 58.880 50.000 0.00 0.00 34.85 4.37
5381 7131 2.422945 GCCCCCTAGTGTATTTTCTGGG 60.423 54.545 0.00 0.00 33.10 4.45
5382 7132 2.745152 CGCCCCCTAGTGTATTTTCTGG 60.745 54.545 0.00 0.00 0.00 3.86
5383 7133 2.561569 CGCCCCCTAGTGTATTTTCTG 58.438 52.381 0.00 0.00 0.00 3.02
5384 7134 1.134189 GCGCCCCCTAGTGTATTTTCT 60.134 52.381 0.00 0.00 0.00 2.52
5385 7135 1.134189 AGCGCCCCCTAGTGTATTTTC 60.134 52.381 2.29 0.00 0.00 2.29
5386 7136 0.916809 AGCGCCCCCTAGTGTATTTT 59.083 50.000 2.29 0.00 0.00 1.82
5387 7137 0.468648 GAGCGCCCCCTAGTGTATTT 59.531 55.000 2.29 0.00 0.00 1.40
5388 7138 1.408453 GGAGCGCCCCCTAGTGTATT 61.408 60.000 2.29 0.00 0.00 1.89
5389 7139 1.837499 GGAGCGCCCCCTAGTGTAT 60.837 63.158 2.29 0.00 0.00 2.29
5390 7140 2.443390 GGAGCGCCCCCTAGTGTA 60.443 66.667 2.29 0.00 0.00 2.90
5410 7160 3.212682 CCGCGGCTCTGCTCTAGA 61.213 66.667 14.67 0.00 0.00 2.43
5411 7161 3.192954 CTCCGCGGCTCTGCTCTAG 62.193 68.421 23.51 5.10 0.00 2.43
5412 7162 3.212682 CTCCGCGGCTCTGCTCTA 61.213 66.667 23.51 0.00 0.00 2.43
5430 7180 3.997064 CTGTTCGGCAGCTCTCCGG 62.997 68.421 20.15 0.00 46.43 5.14
5432 7182 2.125350 CCTGTTCGGCAGCTCTCC 60.125 66.667 0.00 0.00 43.71 3.71
5441 7191 2.223618 GCTAGACTAAGAGCCTGTTCGG 60.224 54.545 0.00 0.00 32.25 4.30
5442 7192 2.539953 CGCTAGACTAAGAGCCTGTTCG 60.540 54.545 0.00 0.00 35.13 3.95
5443 7193 2.223618 CCGCTAGACTAAGAGCCTGTTC 60.224 54.545 0.00 0.00 35.13 3.18
5444 7194 1.751924 CCGCTAGACTAAGAGCCTGTT 59.248 52.381 0.00 0.00 35.13 3.16
5445 7195 1.064611 TCCGCTAGACTAAGAGCCTGT 60.065 52.381 0.00 0.00 35.13 4.00
5446 7196 1.681538 TCCGCTAGACTAAGAGCCTG 58.318 55.000 0.00 0.00 35.13 4.85
5447 7197 2.668144 ATCCGCTAGACTAAGAGCCT 57.332 50.000 0.00 0.00 35.13 4.58
5448 7198 3.385577 CAAATCCGCTAGACTAAGAGCC 58.614 50.000 0.00 0.00 35.13 4.70
5449 7199 2.797719 GCAAATCCGCTAGACTAAGAGC 59.202 50.000 0.00 0.00 35.24 4.09
5450 7200 4.046938 TGCAAATCCGCTAGACTAAGAG 57.953 45.455 0.00 0.00 0.00 2.85
5451 7201 4.672587 ATGCAAATCCGCTAGACTAAGA 57.327 40.909 0.00 0.00 0.00 2.10
5452 7202 6.646653 TGAATATGCAAATCCGCTAGACTAAG 59.353 38.462 0.00 0.00 0.00 2.18
5458 7208 5.410746 ACAGATGAATATGCAAATCCGCTAG 59.589 40.000 0.00 0.00 0.00 3.42
5470 7220 5.180868 GGAAGCTGCCTAACAGATGAATATG 59.819 44.000 2.27 0.00 46.64 1.78
5589 7345 9.099454 CATTCAGTAGGTCAAACTCCTTTATAC 57.901 37.037 0.00 0.00 36.60 1.47
5592 7348 7.311092 TCATTCAGTAGGTCAAACTCCTTTA 57.689 36.000 0.00 0.00 36.60 1.85
5593 7349 6.187727 TCATTCAGTAGGTCAAACTCCTTT 57.812 37.500 0.00 0.00 36.60 3.11
5619 7375 8.168626 CAGATCATGTTCTCGTTTCGATTAAAA 58.831 33.333 3.19 0.00 34.61 1.52
5627 7383 5.220117 CGTTCTCAGATCATGTTCTCGTTTC 60.220 44.000 3.19 0.00 0.00 2.78
5652 7408 1.342672 ACTTCCCTTGACACACGGGT 61.343 55.000 11.94 0.00 42.66 5.28
5675 7431 1.791662 GCGTGGTGGACATTTACGG 59.208 57.895 0.00 0.00 35.49 4.02
5676 7432 1.418367 CGCGTGGTGGACATTTACG 59.582 57.895 0.00 0.00 37.77 3.18
5677 7433 1.791662 CCGCGTGGTGGACATTTAC 59.208 57.895 6.91 0.00 34.74 2.01
5678 7434 4.287580 CCGCGTGGTGGACATTTA 57.712 55.556 6.91 0.00 34.74 1.40
5688 7444 2.815211 CATGTCTGGACCGCGTGG 60.815 66.667 14.93 14.93 42.84 4.94
5689 7445 2.048222 ACATGTCTGGACCGCGTG 60.048 61.111 4.92 0.00 0.00 5.34
5690 7446 2.261671 GACATGTCTGGACCGCGT 59.738 61.111 18.83 0.00 0.00 6.01
5691 7447 2.880879 CGACATGTCTGGACCGCG 60.881 66.667 22.95 0.00 0.00 6.46
5692 7448 1.517257 CTCGACATGTCTGGACCGC 60.517 63.158 22.95 0.00 0.00 5.68
5693 7449 1.517257 GCTCGACATGTCTGGACCG 60.517 63.158 22.95 9.97 0.00 4.79
5694 7450 1.517257 CGCTCGACATGTCTGGACC 60.517 63.158 22.95 5.32 0.00 4.46
5695 7451 1.517257 CCGCTCGACATGTCTGGAC 60.517 63.158 22.95 9.20 0.00 4.02
5696 7452 1.532604 AACCGCTCGACATGTCTGGA 61.533 55.000 22.95 12.93 0.00 3.86
5697 7453 1.078759 GAACCGCTCGACATGTCTGG 61.079 60.000 22.95 19.42 0.00 3.86
5698 7454 0.388520 TGAACCGCTCGACATGTCTG 60.389 55.000 22.95 16.06 0.00 3.51
5699 7455 0.317160 TTGAACCGCTCGACATGTCT 59.683 50.000 22.95 2.63 0.00 3.41
5700 7456 0.438830 GTTGAACCGCTCGACATGTC 59.561 55.000 16.21 16.21 38.24 3.06
5701 7457 1.282248 CGTTGAACCGCTCGACATGT 61.282 55.000 0.00 0.00 38.25 3.21
5702 7458 1.416049 CGTTGAACCGCTCGACATG 59.584 57.895 0.00 0.00 38.25 3.21
5703 7459 3.856508 CGTTGAACCGCTCGACAT 58.143 55.556 0.00 0.00 38.25 3.06
5712 7468 0.872388 ATTTGAGACGGCGTTGAACC 59.128 50.000 16.19 0.00 0.00 3.62
5713 7469 1.263217 ACATTTGAGACGGCGTTGAAC 59.737 47.619 16.19 0.00 0.00 3.18
5714 7470 1.529438 GACATTTGAGACGGCGTTGAA 59.471 47.619 16.19 7.38 0.00 2.69
5715 7471 1.144969 GACATTTGAGACGGCGTTGA 58.855 50.000 16.19 0.00 0.00 3.18
5716 7472 0.165944 GGACATTTGAGACGGCGTTG 59.834 55.000 16.19 10.07 0.00 4.10
5717 7473 0.250124 TGGACATTTGAGACGGCGTT 60.250 50.000 16.19 3.90 0.00 4.84
5718 7474 0.036388 ATGGACATTTGAGACGGCGT 60.036 50.000 14.65 14.65 0.00 5.68
5719 7475 0.374758 CATGGACATTTGAGACGGCG 59.625 55.000 4.80 4.80 0.00 6.46
5720 7476 0.734889 CCATGGACATTTGAGACGGC 59.265 55.000 5.56 0.00 0.00 5.68
5721 7477 2.283298 CTCCATGGACATTTGAGACGG 58.717 52.381 11.44 0.00 0.00 4.79
5722 7478 1.667724 GCTCCATGGACATTTGAGACG 59.332 52.381 11.44 0.00 0.00 4.18
5723 7479 2.681848 CTGCTCCATGGACATTTGAGAC 59.318 50.000 11.44 0.00 0.00 3.36
5724 7480 2.306805 ACTGCTCCATGGACATTTGAGA 59.693 45.455 11.44 0.00 0.00 3.27
5725 7481 2.681848 GACTGCTCCATGGACATTTGAG 59.318 50.000 11.44 0.00 0.00 3.02
5726 7482 2.715046 GACTGCTCCATGGACATTTGA 58.285 47.619 11.44 0.00 0.00 2.69
5727 7483 1.399440 CGACTGCTCCATGGACATTTG 59.601 52.381 11.44 8.62 0.00 2.32
5728 7484 1.742761 CGACTGCTCCATGGACATTT 58.257 50.000 11.44 4.56 0.00 2.32
5729 7485 0.745845 GCGACTGCTCCATGGACATT 60.746 55.000 11.44 8.50 38.39 2.71
5730 7486 1.153289 GCGACTGCTCCATGGACAT 60.153 57.895 11.44 4.95 38.39 3.06
5731 7487 2.265739 GCGACTGCTCCATGGACA 59.734 61.111 11.44 13.08 38.39 4.02
5732 7488 2.103042 GTGCGACTGCTCCATGGAC 61.103 63.158 11.44 8.83 43.34 4.02
5733 7489 1.902765 ATGTGCGACTGCTCCATGGA 61.903 55.000 15.27 15.27 43.34 3.41
5734 7490 1.434622 GATGTGCGACTGCTCCATGG 61.435 60.000 4.97 4.97 43.34 3.66
5735 7491 1.434622 GGATGTGCGACTGCTCCATG 61.435 60.000 0.00 0.00 43.34 3.66
5736 7492 1.153289 GGATGTGCGACTGCTCCAT 60.153 57.895 0.00 0.00 43.34 3.41
5737 7493 2.265739 GGATGTGCGACTGCTCCA 59.734 61.111 0.00 0.00 43.34 3.86
5738 7494 2.887568 CGGATGTGCGACTGCTCC 60.888 66.667 0.00 0.00 43.34 4.70
5739 7495 2.635229 ATCCGGATGTGCGACTGCTC 62.635 60.000 18.33 0.00 43.34 4.26
5740 7496 2.244117 AATCCGGATGTGCGACTGCT 62.244 55.000 19.95 0.00 43.34 4.24
5741 7497 1.369091 AAATCCGGATGTGCGACTGC 61.369 55.000 19.95 0.00 43.20 4.40
5742 7498 0.652592 GAAATCCGGATGTGCGACTG 59.347 55.000 19.95 0.00 0.00 3.51
5743 7499 0.249120 TGAAATCCGGATGTGCGACT 59.751 50.000 19.95 0.00 0.00 4.18
5744 7500 1.261619 GATGAAATCCGGATGTGCGAC 59.738 52.381 19.95 0.23 37.38 5.19
5745 7501 1.134551 TGATGAAATCCGGATGTGCGA 60.135 47.619 19.95 0.00 44.73 5.10
5746 7502 1.298602 TGATGAAATCCGGATGTGCG 58.701 50.000 19.95 0.00 44.73 5.34
5747 7503 3.438360 GTTTGATGAAATCCGGATGTGC 58.562 45.455 19.95 10.98 44.73 4.57
5748 7504 3.487376 CGGTTTGATGAAATCCGGATGTG 60.487 47.826 19.95 0.00 44.73 3.21
5749 7505 2.682856 CGGTTTGATGAAATCCGGATGT 59.317 45.455 19.95 13.72 44.73 3.06
5750 7506 3.338818 CGGTTTGATGAAATCCGGATG 57.661 47.619 19.95 0.00 44.73 3.51
5753 7509 1.745232 TCCGGTTTGATGAAATCCGG 58.255 50.000 22.27 22.27 46.46 5.14
5754 7510 2.747446 ACTTCCGGTTTGATGAAATCCG 59.253 45.455 0.00 10.18 44.73 4.18
5755 7511 5.890424 TTACTTCCGGTTTGATGAAATCC 57.110 39.130 0.00 0.00 44.73 3.01
5756 7512 5.800438 GCTTTACTTCCGGTTTGATGAAATC 59.200 40.000 0.00 0.00 45.83 2.17
5757 7513 5.476945 AGCTTTACTTCCGGTTTGATGAAAT 59.523 36.000 0.00 0.00 0.00 2.17
5758 7514 4.825085 AGCTTTACTTCCGGTTTGATGAAA 59.175 37.500 0.00 0.00 0.00 2.69
5759 7515 4.215399 CAGCTTTACTTCCGGTTTGATGAA 59.785 41.667 0.00 0.00 0.00 2.57
5760 7516 3.751175 CAGCTTTACTTCCGGTTTGATGA 59.249 43.478 0.00 0.00 0.00 2.92
5761 7517 3.119849 CCAGCTTTACTTCCGGTTTGATG 60.120 47.826 0.00 0.00 0.00 3.07
5762 7518 3.081804 CCAGCTTTACTTCCGGTTTGAT 58.918 45.455 0.00 0.00 0.00 2.57
5763 7519 2.500229 CCAGCTTTACTTCCGGTTTGA 58.500 47.619 0.00 0.00 0.00 2.69
5764 7520 1.068541 GCCAGCTTTACTTCCGGTTTG 60.069 52.381 0.00 0.00 0.00 2.93
5765 7521 1.244816 GCCAGCTTTACTTCCGGTTT 58.755 50.000 0.00 0.00 0.00 3.27
5766 7522 0.109723 TGCCAGCTTTACTTCCGGTT 59.890 50.000 0.00 0.00 0.00 4.44
5767 7523 0.321653 CTGCCAGCTTTACTTCCGGT 60.322 55.000 0.00 0.00 0.00 5.28
5768 7524 0.036388 TCTGCCAGCTTTACTTCCGG 60.036 55.000 0.00 0.00 0.00 5.14
5769 7525 1.363744 CTCTGCCAGCTTTACTTCCG 58.636 55.000 0.00 0.00 0.00 4.30
5770 7526 1.003696 ACCTCTGCCAGCTTTACTTCC 59.996 52.381 0.00 0.00 0.00 3.46
5771 7527 2.481289 ACCTCTGCCAGCTTTACTTC 57.519 50.000 0.00 0.00 0.00 3.01
5772 7528 2.887152 CAAACCTCTGCCAGCTTTACTT 59.113 45.455 0.00 0.00 0.00 2.24
5773 7529 2.106511 TCAAACCTCTGCCAGCTTTACT 59.893 45.455 0.00 0.00 0.00 2.24
5774 7530 2.485814 CTCAAACCTCTGCCAGCTTTAC 59.514 50.000 0.00 0.00 0.00 2.01
5775 7531 2.553028 CCTCAAACCTCTGCCAGCTTTA 60.553 50.000 0.00 0.00 0.00 1.85
5776 7532 1.613836 CTCAAACCTCTGCCAGCTTT 58.386 50.000 0.00 0.00 0.00 3.51
5777 7533 0.251077 CCTCAAACCTCTGCCAGCTT 60.251 55.000 0.00 0.00 0.00 3.74
5778 7534 1.377994 CCTCAAACCTCTGCCAGCT 59.622 57.895 0.00 0.00 0.00 4.24
5779 7535 1.676967 CCCTCAAACCTCTGCCAGC 60.677 63.158 0.00 0.00 0.00 4.85
5780 7536 0.035630 CTCCCTCAAACCTCTGCCAG 60.036 60.000 0.00 0.00 0.00 4.85
5781 7537 0.768221 ACTCCCTCAAACCTCTGCCA 60.768 55.000 0.00 0.00 0.00 4.92
5782 7538 0.035915 GACTCCCTCAAACCTCTGCC 60.036 60.000 0.00 0.00 0.00 4.85
5783 7539 0.035915 GGACTCCCTCAAACCTCTGC 60.036 60.000 0.00 0.00 0.00 4.26
5784 7540 1.277557 CTGGACTCCCTCAAACCTCTG 59.722 57.143 0.00 0.00 0.00 3.35
5785 7541 1.150135 TCTGGACTCCCTCAAACCTCT 59.850 52.381 0.00 0.00 0.00 3.69
5786 7542 1.276705 GTCTGGACTCCCTCAAACCTC 59.723 57.143 0.00 0.00 0.00 3.85
5787 7543 1.353091 GTCTGGACTCCCTCAAACCT 58.647 55.000 0.00 0.00 0.00 3.50
5788 7544 1.002544 CTGTCTGGACTCCCTCAAACC 59.997 57.143 2.38 0.00 0.00 3.27
5789 7545 1.609320 GCTGTCTGGACTCCCTCAAAC 60.609 57.143 2.38 0.00 0.00 2.93
5790 7546 0.687354 GCTGTCTGGACTCCCTCAAA 59.313 55.000 2.38 0.00 0.00 2.69
5791 7547 1.194781 GGCTGTCTGGACTCCCTCAA 61.195 60.000 2.38 0.00 0.00 3.02
5792 7548 1.610673 GGCTGTCTGGACTCCCTCA 60.611 63.158 2.38 0.00 0.00 3.86
5793 7549 2.716017 CGGCTGTCTGGACTCCCTC 61.716 68.421 2.38 0.00 0.00 4.30
5794 7550 2.681778 CGGCTGTCTGGACTCCCT 60.682 66.667 2.38 0.00 0.00 4.20
5795 7551 4.459089 GCGGCTGTCTGGACTCCC 62.459 72.222 0.00 2.15 0.00 4.30
5796 7552 4.459089 GGCGGCTGTCTGGACTCC 62.459 72.222 0.00 3.16 0.00 3.85
5797 7553 4.803426 CGGCGGCTGTCTGGACTC 62.803 72.222 7.61 0.00 0.00 3.36
5799 7555 3.701604 CTACGGCGGCTGTCTGGAC 62.702 68.421 19.31 0.00 0.00 4.02
5800 7556 3.449227 CTACGGCGGCTGTCTGGA 61.449 66.667 19.31 0.00 0.00 3.86
5801 7557 3.001902 TTCTACGGCGGCTGTCTGG 62.002 63.158 19.31 10.11 0.00 3.86
5802 7558 1.805945 GTTCTACGGCGGCTGTCTG 60.806 63.158 19.31 12.66 0.00 3.51
5803 7559 2.273179 TGTTCTACGGCGGCTGTCT 61.273 57.895 19.31 0.00 0.00 3.41
5804 7560 2.092882 GTGTTCTACGGCGGCTGTC 61.093 63.158 19.31 4.48 0.00 3.51
5805 7561 2.048503 GTGTTCTACGGCGGCTGT 60.049 61.111 19.67 19.67 0.00 4.40
5806 7562 2.813908 GGTGTTCTACGGCGGCTG 60.814 66.667 13.24 7.39 0.00 4.85
5807 7563 4.430765 CGGTGTTCTACGGCGGCT 62.431 66.667 13.24 0.00 0.00 5.52
5808 7564 3.919973 TTCGGTGTTCTACGGCGGC 62.920 63.158 13.24 0.00 0.00 6.53
5809 7565 2.090524 GTTCGGTGTTCTACGGCGG 61.091 63.158 13.24 0.00 0.00 6.13
5810 7566 1.372004 TGTTCGGTGTTCTACGGCG 60.372 57.895 4.80 4.80 0.00 6.46
5811 7567 1.287041 GGTGTTCGGTGTTCTACGGC 61.287 60.000 0.00 0.00 0.00 5.68
5812 7568 0.316204 AGGTGTTCGGTGTTCTACGG 59.684 55.000 0.00 0.00 0.00 4.02
5813 7569 1.269413 ACAGGTGTTCGGTGTTCTACG 60.269 52.381 0.00 0.00 0.00 3.51
5814 7570 2.521105 ACAGGTGTTCGGTGTTCTAC 57.479 50.000 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.