Multiple sequence alignment - TraesCS3D01G182100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G182100 chr3D 100.000 6572 0 0 1 6572 165739418 165732847 0.000000e+00 12137.0
1 TraesCS3D01G182100 chr3A 94.942 4686 145 34 1 4664 203660120 203655505 0.000000e+00 7256.0
2 TraesCS3D01G182100 chr3A 95.120 1045 49 1 4805 5849 203655391 203654349 0.000000e+00 1646.0
3 TraesCS3D01G182100 chr3A 96.364 110 4 0 6463 6572 203653577 203653468 1.460000e-41 182.0
4 TraesCS3D01G182100 chr3A 94.643 56 3 0 4729 4784 217818876 217818931 3.260000e-13 87.9
5 TraesCS3D01G182100 chr3A 97.297 37 1 0 4688 4724 203655502 203655466 5.500000e-06 63.9
6 TraesCS3D01G182100 chr3B 95.900 3488 94 18 314 3785 241397725 241394271 0.000000e+00 5603.0
7 TraesCS3D01G182100 chr3B 91.499 2082 125 24 3778 5849 241393050 241391011 0.000000e+00 2817.0
8 TraesCS3D01G182100 chr3B 95.695 302 5 3 1 302 241398216 241397923 4.610000e-131 479.0
9 TraesCS3D01G182100 chr3B 97.887 142 3 0 6431 6572 241390291 241390150 5.090000e-61 246.0
10 TraesCS3D01G182100 chr5D 92.308 65 3 1 4729 4793 58683233 58683171 2.520000e-14 91.6
11 TraesCS3D01G182100 chr5B 94.828 58 1 2 4729 4786 128746915 128746970 9.080000e-14 89.8
12 TraesCS3D01G182100 chr1B 92.188 64 4 1 4729 4791 122964597 122964534 9.080000e-14 89.8
13 TraesCS3D01G182100 chr1B 91.803 61 4 1 4719 4778 266914866 266914806 4.220000e-12 84.2
14 TraesCS3D01G182100 chr7B 92.188 64 2 3 4724 4786 530493425 530493486 3.260000e-13 87.9
15 TraesCS3D01G182100 chr7A 90.769 65 5 1 4729 4793 97602745 97602682 1.170000e-12 86.1
16 TraesCS3D01G182100 chr1D 90.769 65 3 3 4729 4793 182700123 182700184 4.220000e-12 84.2
17 TraesCS3D01G182100 chr1A 88.571 70 6 2 4723 4791 285989736 285989804 4.220000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G182100 chr3D 165732847 165739418 6571 True 12137.000 12137 100.00000 1 6572 1 chr3D.!!$R1 6571
1 TraesCS3D01G182100 chr3A 203653468 203660120 6652 True 2286.975 7256 95.93075 1 6572 4 chr3A.!!$R1 6571
2 TraesCS3D01G182100 chr3B 241390150 241398216 8066 True 2286.250 5603 95.24525 1 6572 4 chr3B.!!$R1 6571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 627 2.794910 CGTTCATGTCACGAGTTGTTCT 59.205 45.455 12.95 0.0 40.20 3.01 F
1054 1243 0.512952 CTTGGCGTTCCTCTGTTTCG 59.487 55.000 0.00 0.0 0.00 3.46 F
2963 3178 0.179070 TCGCATAAGCATACGGCCAA 60.179 50.000 2.24 0.0 46.50 4.52 F
4149 5596 0.252193 CCAAGGATCCCCCAAAGCAA 60.252 55.000 8.55 0.0 37.41 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1350 1559 1.625818 AGTGCCACTTCAGGACTAAGG 59.374 52.381 0.00 0.00 0.00 2.69 R
2997 3212 1.941812 CACAGTTGCCCGTCTTGTC 59.058 57.895 0.00 0.00 0.00 3.18 R
4810 6258 0.318955 AAGCATGAAAACTGCCGTGC 60.319 50.000 0.00 0.00 43.56 5.34 R
6082 7532 0.109723 TTGTTGCCTGGACCAGTACC 59.890 55.000 20.24 8.67 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 161 6.994421 AAGAACCAAAGTGTATCCCAAAAT 57.006 33.333 0.00 0.00 0.00 1.82
302 303 7.804843 ATCGCTAATCTGTACTGTACTACTT 57.195 36.000 17.98 10.75 0.00 2.24
303 304 7.244166 TCGCTAATCTGTACTGTACTACTTC 57.756 40.000 17.98 2.46 0.00 3.01
328 514 7.129038 TCTCTACCTATCCCTTTCACTTCTCTA 59.871 40.741 0.00 0.00 0.00 2.43
439 625 2.816689 TCGTTCATGTCACGAGTTGTT 58.183 42.857 15.82 0.00 41.66 2.83
441 627 2.794910 CGTTCATGTCACGAGTTGTTCT 59.205 45.455 12.95 0.00 40.20 3.01
648 835 3.602491 CGTCACTGAGTTTGAAAGAAGCG 60.602 47.826 0.00 0.00 0.00 4.68
649 836 3.555956 GTCACTGAGTTTGAAAGAAGCGA 59.444 43.478 0.00 0.00 0.00 4.93
963 1152 3.570125 GTCAGAGGTGAAAAAGAAAGGGG 59.430 47.826 0.00 0.00 33.27 4.79
1050 1239 1.270907 AGATCTTGGCGTTCCTCTGT 58.729 50.000 0.00 0.00 0.00 3.41
1054 1243 0.512952 CTTGGCGTTCCTCTGTTTCG 59.487 55.000 0.00 0.00 0.00 3.46
1154 1363 4.392940 CTCAATGGTTCAGAGTTGGAGTT 58.607 43.478 0.00 0.00 0.00 3.01
1162 1371 4.021102 TCAGAGTTGGAGTTTTGATCCC 57.979 45.455 0.00 0.00 35.86 3.85
1172 1381 5.183228 GGAGTTTTGATCCCTCGATGTTTA 58.817 41.667 0.00 0.00 0.00 2.01
1174 1383 4.941873 AGTTTTGATCCCTCGATGTTTACC 59.058 41.667 0.00 0.00 0.00 2.85
1193 1402 4.015872 ACCTTCTTTGTTTCTGCCGATA 57.984 40.909 0.00 0.00 0.00 2.92
1197 1406 3.674997 TCTTTGTTTCTGCCGATAAGCT 58.325 40.909 0.00 0.00 0.00 3.74
1198 1407 4.072131 TCTTTGTTTCTGCCGATAAGCTT 58.928 39.130 3.48 3.48 0.00 3.74
1199 1408 3.829886 TTGTTTCTGCCGATAAGCTTG 57.170 42.857 9.86 0.00 0.00 4.01
1228 1437 2.108250 ACCCACCATGGCTATTATCCAC 59.892 50.000 13.04 0.00 35.79 4.02
1250 1459 5.006386 ACAGATTTTGAACTGGCTTAGGAG 58.994 41.667 0.00 0.00 38.30 3.69
1371 1580 2.039084 CCTTAGTCCTGAAGTGGCACTT 59.961 50.000 31.59 31.59 41.95 3.16
1388 1597 4.261031 GGCACTTTGTCGTTGTAAGAATGT 60.261 41.667 0.00 0.00 0.00 2.71
1402 1611 6.629128 TGTAAGAATGTTTGGCATGTAATGG 58.371 36.000 0.00 0.00 46.86 3.16
1525 1734 6.396829 AACCAGAAGAAACCTGATGAAAAG 57.603 37.500 0.00 0.00 33.65 2.27
1526 1735 4.279420 ACCAGAAGAAACCTGATGAAAAGC 59.721 41.667 0.00 0.00 33.65 3.51
1663 1874 6.524101 ACACTTAAACTTGCAGGAAGAAAA 57.476 33.333 8.96 0.00 35.42 2.29
1966 2177 1.454201 GAGCAAAGGTTCTAGGTGGC 58.546 55.000 0.00 0.00 0.00 5.01
2047 2258 7.981789 TGTCATGTTTTCAGCTATCTAACCTAG 59.018 37.037 0.00 0.00 0.00 3.02
2146 2357 9.231297 GGAAATATCGATATCAAAAGATGGGAA 57.769 33.333 18.01 0.00 0.00 3.97
2442 2657 7.182206 ACTGTACCTGGTCTTGAAATACCTTAT 59.818 37.037 0.63 0.00 36.67 1.73
2446 2661 5.529060 CCTGGTCTTGAAATACCTTATGCTC 59.471 44.000 0.00 0.00 36.67 4.26
2448 2663 6.115446 TGGTCTTGAAATACCTTATGCTCTG 58.885 40.000 0.00 0.00 36.67 3.35
2503 2718 8.498054 TGGATTTTTCATAGCTTCTAGTTGAG 57.502 34.615 0.00 0.00 0.00 3.02
2560 2775 6.648310 CAGGACAGATATCAGACGCATTAATT 59.352 38.462 5.32 0.00 0.00 1.40
2563 2778 7.359598 GGACAGATATCAGACGCATTAATTGTC 60.360 40.741 5.32 8.82 0.00 3.18
2578 2793 7.253420 GCATTAATTGTCGCTCAACAACATTAG 60.253 37.037 0.00 0.00 41.65 1.73
2588 2803 4.507710 TCAACAACATTAGAGCTAGCAGG 58.492 43.478 18.83 0.00 0.00 4.85
2609 2824 4.665483 AGGGGAGTAATTAGATTTGGAGGG 59.335 45.833 0.00 0.00 0.00 4.30
2662 2877 3.741344 GGAGTTTATATAGCTGCACACCG 59.259 47.826 1.02 0.00 0.00 4.94
2711 2926 6.376978 ACTGAAAATGAGCATCGAAGAAAAG 58.623 36.000 0.00 0.00 43.58 2.27
2779 2994 7.206981 AGAATGATGAATAACCAAATAGCCG 57.793 36.000 0.00 0.00 0.00 5.52
2791 3006 5.258051 ACCAAATAGCCGAATTCCACTAAA 58.742 37.500 0.00 0.00 0.00 1.85
2799 3014 3.254657 CCGAATTCCACTAAAGTTTGCCA 59.745 43.478 0.00 0.00 0.00 4.92
2853 3068 6.694411 GCAGAATTCATTAACCATTGCAGTAG 59.306 38.462 8.44 0.00 0.00 2.57
2919 3134 4.650972 TGCCAGTTATTACAGGAACCTT 57.349 40.909 0.00 0.00 32.93 3.50
2920 3135 5.765576 TGCCAGTTATTACAGGAACCTTA 57.234 39.130 0.00 0.00 32.93 2.69
2963 3178 0.179070 TCGCATAAGCATACGGCCAA 60.179 50.000 2.24 0.00 46.50 4.52
3006 3221 2.080286 ATCTGGTTTCGACAAGACGG 57.920 50.000 0.00 0.00 0.00 4.79
3026 3241 1.826385 GCAACTGTGCCTATTGGACT 58.174 50.000 0.00 0.00 45.68 3.85
3311 3526 3.010200 GGAACCATCTTTGATGAGGCT 57.990 47.619 8.91 0.00 0.00 4.58
3437 3652 7.604164 AGACATGGTAAGCGATAATAATCCAAG 59.396 37.037 0.00 0.00 0.00 3.61
3438 3653 7.224297 ACATGGTAAGCGATAATAATCCAAGT 58.776 34.615 0.00 0.00 0.00 3.16
3439 3654 8.372459 ACATGGTAAGCGATAATAATCCAAGTA 58.628 33.333 0.00 0.00 0.00 2.24
3440 3655 9.214957 CATGGTAAGCGATAATAATCCAAGTAA 57.785 33.333 0.00 0.00 0.00 2.24
3528 3743 4.952957 TCTGGTAACTGGAGATCTCAGAAG 59.047 45.833 23.85 18.51 36.22 2.85
3630 3845 2.105821 TGAGGATTCAAACCCACGAGTT 59.894 45.455 0.00 0.00 0.00 3.01
3666 3881 8.727910 CACTTATAAAGCATGATGAGCATATGT 58.272 33.333 4.29 0.00 34.82 2.29
3723 3938 4.551702 TGCTTCTGGCTGAATGTAGTTA 57.448 40.909 7.30 0.00 42.39 2.24
3785 5228 6.013032 CCTCCATAATCTGTATCCACTTCCAT 60.013 42.308 0.00 0.00 0.00 3.41
3814 5257 6.694447 AGGAAGCTACGAAAACACATACTTA 58.306 36.000 0.00 0.00 0.00 2.24
3838 5285 9.522804 TTAAAACAAAAACATTAGGTACTGCAG 57.477 29.630 13.48 13.48 41.52 4.41
3845 5292 9.461312 AAAAACATTAGGTACTGCAGAATCATA 57.539 29.630 23.35 9.06 41.52 2.15
3984 5431 2.223829 CGAGATTATTGTCTCTGCCGGT 60.224 50.000 1.90 0.00 41.95 5.28
4149 5596 0.252193 CCAAGGATCCCCCAAAGCAA 60.252 55.000 8.55 0.00 37.41 3.91
4269 5716 2.189594 TCATGTCTGCTGAGGTTTGG 57.810 50.000 0.00 0.00 0.00 3.28
4308 5755 8.801882 TGTTACCTGAAATAAAATTCGAGGAT 57.198 30.769 0.00 0.00 34.48 3.24
4347 5794 6.658816 ACAAGTATCATGGTGCATTTCAGTTA 59.341 34.615 0.00 0.00 0.00 2.24
4350 5797 5.981088 ATCATGGTGCATTTCAGTTAACA 57.019 34.783 8.61 0.00 0.00 2.41
4358 5805 7.865385 TGGTGCATTTCAGTTAACAAAAGTATC 59.135 33.333 8.61 0.00 0.00 2.24
4378 5825 7.564793 AGTATCATGGTAGTGCATTTCAGTTA 58.435 34.615 0.00 0.00 0.00 2.24
4391 5838 9.410556 GTGCATTTCAGTTAACAAAAGTATCAT 57.589 29.630 8.61 0.00 0.00 2.45
4392 5839 9.409312 TGCATTTCAGTTAACAAAAGTATCATG 57.591 29.630 8.61 3.91 0.00 3.07
4393 5840 8.863049 GCATTTCAGTTAACAAAAGTATCATGG 58.137 33.333 8.61 0.00 0.00 3.66
4394 5841 9.912634 CATTTCAGTTAACAAAAGTATCATGGT 57.087 29.630 8.61 0.00 0.00 3.55
4397 5844 9.787435 TTCAGTTAACAAAAGTATCATGGTAGT 57.213 29.630 8.61 0.00 0.00 2.73
4398 5845 9.214957 TCAGTTAACAAAAGTATCATGGTAGTG 57.785 33.333 8.61 0.00 0.00 2.74
4399 5846 7.962918 CAGTTAACAAAAGTATCATGGTAGTGC 59.037 37.037 8.61 0.00 0.00 4.40
4400 5847 7.663905 AGTTAACAAAAGTATCATGGTAGTGCA 59.336 33.333 8.61 0.00 0.00 4.57
4401 5848 8.458843 GTTAACAAAAGTATCATGGTAGTGCAT 58.541 33.333 0.00 0.00 0.00 3.96
4402 5849 7.466746 AACAAAAGTATCATGGTAGTGCATT 57.533 32.000 0.00 0.00 0.00 3.56
4403 5850 7.466746 ACAAAAGTATCATGGTAGTGCATTT 57.533 32.000 0.00 0.00 0.00 2.32
4404 5851 7.538575 ACAAAAGTATCATGGTAGTGCATTTC 58.461 34.615 0.00 0.00 0.00 2.17
4405 5852 7.176515 ACAAAAGTATCATGGTAGTGCATTTCA 59.823 33.333 0.00 0.00 0.00 2.69
4406 5853 6.932356 AAGTATCATGGTAGTGCATTTCAG 57.068 37.500 0.00 0.00 0.00 3.02
4407 5854 5.994250 AGTATCATGGTAGTGCATTTCAGT 58.006 37.500 0.00 0.00 0.00 3.41
4408 5855 6.418101 AGTATCATGGTAGTGCATTTCAGTT 58.582 36.000 0.00 0.00 0.00 3.16
4409 5856 6.886459 AGTATCATGGTAGTGCATTTCAGTTT 59.114 34.615 0.00 0.00 0.00 2.66
4410 5857 8.046708 AGTATCATGGTAGTGCATTTCAGTTTA 58.953 33.333 0.00 0.00 0.00 2.01
4411 5858 6.494893 TCATGGTAGTGCATTTCAGTTTAC 57.505 37.500 0.00 0.00 0.00 2.01
4412 5859 6.000840 TCATGGTAGTGCATTTCAGTTTACA 58.999 36.000 0.00 0.00 0.00 2.41
4413 5860 6.488344 TCATGGTAGTGCATTTCAGTTTACAA 59.512 34.615 0.00 0.00 0.00 2.41
4414 5861 6.701145 TGGTAGTGCATTTCAGTTTACAAA 57.299 33.333 0.00 0.00 0.00 2.83
4415 5862 7.101652 TGGTAGTGCATTTCAGTTTACAAAA 57.898 32.000 0.00 0.00 0.00 2.44
4416 5863 6.975772 TGGTAGTGCATTTCAGTTTACAAAAC 59.024 34.615 0.00 0.00 0.00 2.43
4417 5864 7.147983 TGGTAGTGCATTTCAGTTTACAAAACT 60.148 33.333 0.00 0.00 0.00 2.66
4418 5865 7.167468 GGTAGTGCATTTCAGTTTACAAAACTG 59.833 37.037 21.11 21.11 46.67 3.16
4419 5866 6.630071 AGTGCATTTCAGTTTACAAAACTGT 58.370 32.000 24.27 3.73 45.75 3.55
4420 5867 6.751888 AGTGCATTTCAGTTTACAAAACTGTC 59.248 34.615 24.27 13.83 45.75 3.51
4421 5868 6.529829 GTGCATTTCAGTTTACAAAACTGTCA 59.470 34.615 24.27 15.91 45.75 3.58
4468 5915 4.088496 GCAAAACAATACATCTTGCACGAC 59.912 41.667 0.00 0.00 41.55 4.34
4476 5923 4.142609 ACATCTTGCACGACCAATCTAT 57.857 40.909 0.00 0.00 0.00 1.98
4509 5956 4.632327 CCCTAAAATGGGCTTTTTGGAA 57.368 40.909 11.94 0.00 46.46 3.53
4620 6068 7.555914 TGTAGGTAAGAATCAAATTATGCAGCA 59.444 33.333 0.00 0.00 0.00 4.41
4646 6094 5.228945 ACACTCATTTGCAACTACCTACT 57.771 39.130 0.00 0.00 0.00 2.57
4655 6103 8.739972 CATTTGCAACTACCTACTTTCCTATTT 58.260 33.333 0.00 0.00 0.00 1.40
4734 6182 8.568794 AGTTATCTTTCAAAGTACTGAAAAGGC 58.431 33.333 17.86 10.35 43.03 4.35
4735 6183 8.568794 GTTATCTTTCAAAGTACTGAAAAGGCT 58.431 33.333 17.86 11.75 43.03 4.58
4740 6188 6.131544 TCAAAGTACTGAAAAGGCTTTCAC 57.868 37.500 13.76 11.03 44.76 3.18
4741 6189 5.067283 TCAAAGTACTGAAAAGGCTTTCACC 59.933 40.000 13.76 6.50 44.76 4.02
4742 6190 3.487372 AGTACTGAAAAGGCTTTCACCC 58.513 45.455 13.76 4.07 44.76 4.61
4743 6191 1.704641 ACTGAAAAGGCTTTCACCCC 58.295 50.000 13.76 1.69 44.76 4.95
4744 6192 1.063266 ACTGAAAAGGCTTTCACCCCA 60.063 47.619 13.76 5.98 44.76 4.96
4745 6193 1.341209 CTGAAAAGGCTTTCACCCCAC 59.659 52.381 13.76 0.68 44.76 4.61
4746 6194 1.063266 TGAAAAGGCTTTCACCCCACT 60.063 47.619 13.76 0.00 44.76 4.00
4747 6195 2.039418 GAAAAGGCTTTCACCCCACTT 58.961 47.619 13.76 0.00 40.67 3.16
4748 6196 2.174685 AAAGGCTTTCACCCCACTTT 57.825 45.000 6.68 0.00 0.00 2.66
4749 6197 3.322191 AAAGGCTTTCACCCCACTTTA 57.678 42.857 6.68 0.00 0.00 1.85
4750 6198 3.542969 AAGGCTTTCACCCCACTTTAT 57.457 42.857 0.00 0.00 0.00 1.40
4752 6200 4.881157 AGGCTTTCACCCCACTTTATAT 57.119 40.909 0.00 0.00 0.00 0.86
4754 6202 6.530601 AGGCTTTCACCCCACTTTATATAT 57.469 37.500 0.00 0.00 0.00 0.86
4755 6203 7.642094 AGGCTTTCACCCCACTTTATATATA 57.358 36.000 0.00 0.00 0.00 0.86
4756 6204 8.052621 AGGCTTTCACCCCACTTTATATATAA 57.947 34.615 0.81 0.81 0.00 0.98
4769 6217 5.866335 TTATATATAAAGCAAACCGCCCG 57.134 39.130 2.56 0.00 44.04 6.13
4771 6219 1.658994 TATAAAGCAAACCGCCCGAG 58.341 50.000 0.00 0.00 44.04 4.63
4772 6220 1.654023 ATAAAGCAAACCGCCCGAGC 61.654 55.000 0.00 0.00 44.04 5.03
4778 6226 3.860930 AAACCGCCCGAGCCACAAT 62.861 57.895 0.00 0.00 34.57 2.71
4782 6230 2.537560 CGCCCGAGCCACAATCATC 61.538 63.158 0.00 0.00 34.57 2.92
4783 6231 2.189499 GCCCGAGCCACAATCATCC 61.189 63.158 0.00 0.00 0.00 3.51
4784 6232 1.224315 CCCGAGCCACAATCATCCA 59.776 57.895 0.00 0.00 0.00 3.41
4785 6233 0.394216 CCCGAGCCACAATCATCCAA 60.394 55.000 0.00 0.00 0.00 3.53
4786 6234 1.462616 CCGAGCCACAATCATCCAAA 58.537 50.000 0.00 0.00 0.00 3.28
4790 6238 2.557924 GAGCCACAATCATCCAAACACA 59.442 45.455 0.00 0.00 0.00 3.72
4791 6239 2.559668 AGCCACAATCATCCAAACACAG 59.440 45.455 0.00 0.00 0.00 3.66
4792 6240 2.353011 GCCACAATCATCCAAACACAGG 60.353 50.000 0.00 0.00 0.00 4.00
4794 6242 2.296752 CACAATCATCCAAACACAGGCA 59.703 45.455 0.00 0.00 0.00 4.75
4796 6244 4.158209 CACAATCATCCAAACACAGGCATA 59.842 41.667 0.00 0.00 0.00 3.14
4798 6246 6.039605 CACAATCATCCAAACACAGGCATATA 59.960 38.462 0.00 0.00 0.00 0.86
4799 6247 6.039717 ACAATCATCCAAACACAGGCATATAC 59.960 38.462 0.00 0.00 0.00 1.47
4800 6248 5.372343 TCATCCAAACACAGGCATATACT 57.628 39.130 0.00 0.00 0.00 2.12
4801 6249 5.754782 TCATCCAAACACAGGCATATACTT 58.245 37.500 0.00 0.00 0.00 2.24
4802 6250 5.822519 TCATCCAAACACAGGCATATACTTC 59.177 40.000 0.00 0.00 0.00 3.01
4803 6251 4.523083 TCCAAACACAGGCATATACTTCC 58.477 43.478 0.00 0.00 0.00 3.46
4866 6314 4.502105 TCTAATGCAGATTGGGCAGTTA 57.498 40.909 0.00 0.00 45.68 2.24
4872 6320 1.860950 CAGATTGGGCAGTTATCGACG 59.139 52.381 0.00 0.00 0.00 5.12
5061 6509 4.617959 TCGTCACCTTCAACTACTTCAAG 58.382 43.478 0.00 0.00 0.00 3.02
5184 6632 7.983484 GGATATTCAATGGAAAAACTGCTCAAT 59.017 33.333 0.00 0.00 36.43 2.57
5227 6675 3.735237 ACCTGATACCGAAGCATACAG 57.265 47.619 0.00 0.00 0.00 2.74
5322 6770 0.847373 TAGGCAAGGTGGTTGACCAA 59.153 50.000 4.08 0.00 46.85 3.67
5340 6788 3.317993 ACCAACAGTACAAAGTGATTGGC 59.682 43.478 0.00 0.00 43.66 4.52
5341 6789 3.554524 CAACAGTACAAAGTGATTGGCG 58.445 45.455 0.00 0.00 43.66 5.69
5432 6880 2.105306 TCATGATGATGGGCAGGTACAG 59.895 50.000 0.00 0.00 0.00 2.74
5441 6889 0.875059 GGCAGGTACAGCACAGAAAC 59.125 55.000 11.05 0.00 44.97 2.78
5499 6947 5.990120 ATCCAGGGTTTGATCTTTCTTTG 57.010 39.130 0.00 0.00 0.00 2.77
5500 6948 4.803452 TCCAGGGTTTGATCTTTCTTTGT 58.197 39.130 0.00 0.00 0.00 2.83
5501 6949 5.208121 TCCAGGGTTTGATCTTTCTTTGTT 58.792 37.500 0.00 0.00 0.00 2.83
5504 6952 6.040391 CCAGGGTTTGATCTTTCTTTGTTGTA 59.960 38.462 0.00 0.00 0.00 2.41
5529 6977 2.361119 GACGTGCAGATACATGGGAGTA 59.639 50.000 0.00 0.00 0.00 2.59
5556 7004 3.516700 TCTTAAGGGAAAGGTTAGGACGG 59.483 47.826 1.85 0.00 0.00 4.79
5626 7074 7.776107 TCATGTAAGAATGTGACTTAGGAGAG 58.224 38.462 0.00 0.00 31.75 3.20
5661 7109 9.831737 AGTAATTTTTGAAGAGATTCATCAACG 57.168 29.630 0.00 0.00 34.35 4.10
5680 7128 1.946768 CGACCACCAAAGAAAGAAGCA 59.053 47.619 0.00 0.00 0.00 3.91
5681 7129 2.287009 CGACCACCAAAGAAAGAAGCAC 60.287 50.000 0.00 0.00 0.00 4.40
5682 7130 2.952310 GACCACCAAAGAAAGAAGCACT 59.048 45.455 0.00 0.00 0.00 4.40
5686 7134 5.163237 ACCACCAAAGAAAGAAGCACTAGTA 60.163 40.000 0.00 0.00 0.00 1.82
5687 7135 5.940470 CCACCAAAGAAAGAAGCACTAGTAT 59.060 40.000 0.00 0.00 0.00 2.12
5757 7207 9.908152 GGCCTACCAAAATATTATGTTACATTC 57.092 33.333 2.23 0.00 35.26 2.67
5791 7241 5.458041 CTTTTTGCTCCAAAGGATCTTCA 57.542 39.130 0.00 0.00 34.72 3.02
5792 7242 5.846203 CTTTTTGCTCCAAAGGATCTTCAA 58.154 37.500 0.00 0.00 34.72 2.69
5840 7290 4.873827 TCTTACACTGTGGACAAGACAAAC 59.126 41.667 13.09 0.00 0.00 2.93
5845 7295 4.508124 CACTGTGGACAAGACAAACTCTAC 59.492 45.833 0.00 0.00 0.00 2.59
5849 7299 4.807304 GTGGACAAGACAAACTCTACGAAA 59.193 41.667 0.00 0.00 0.00 3.46
5850 7300 5.465724 GTGGACAAGACAAACTCTACGAAAT 59.534 40.000 0.00 0.00 0.00 2.17
5851 7301 5.465390 TGGACAAGACAAACTCTACGAAATG 59.535 40.000 0.00 0.00 0.00 2.32
5852 7302 5.465724 GGACAAGACAAACTCTACGAAATGT 59.534 40.000 0.00 0.00 0.00 2.71
5853 7303 6.643770 GGACAAGACAAACTCTACGAAATGTA 59.356 38.462 0.00 0.00 0.00 2.29
5854 7304 7.170320 GGACAAGACAAACTCTACGAAATGTAA 59.830 37.037 0.00 0.00 31.20 2.41
5855 7305 8.603242 ACAAGACAAACTCTACGAAATGTAAT 57.397 30.769 0.00 0.00 31.20 1.89
5856 7306 8.709646 ACAAGACAAACTCTACGAAATGTAATC 58.290 33.333 0.00 0.00 31.20 1.75
5857 7307 8.708742 CAAGACAAACTCTACGAAATGTAATCA 58.291 33.333 0.00 0.00 31.20 2.57
5858 7308 9.436957 AAGACAAACTCTACGAAATGTAATCAT 57.563 29.630 0.00 0.00 35.59 2.45
5901 7351 5.813080 TCATGAAGAATCAATGTGCAGAG 57.187 39.130 0.00 0.00 39.49 3.35
5906 7356 6.821720 TGAAGAATCAATGTGCAGAGAGTGC 61.822 44.000 0.00 0.00 42.13 4.40
5921 7371 5.982516 CAGAGAGTGCCATGTTATCTAGAAC 59.017 44.000 0.00 0.00 0.00 3.01
5956 7406 8.352752 TGATACTAACATGTCAGAAAATAGCG 57.647 34.615 2.04 0.00 0.00 4.26
5957 7407 5.470845 ACTAACATGTCAGAAAATAGCGC 57.529 39.130 2.04 0.00 0.00 5.92
5958 7408 3.764885 AACATGTCAGAAAATAGCGCC 57.235 42.857 2.29 0.00 0.00 6.53
5959 7409 2.710377 ACATGTCAGAAAATAGCGCCA 58.290 42.857 2.29 0.00 0.00 5.69
5960 7410 3.081061 ACATGTCAGAAAATAGCGCCAA 58.919 40.909 2.29 0.00 0.00 4.52
5961 7411 3.505680 ACATGTCAGAAAATAGCGCCAAA 59.494 39.130 2.29 0.00 0.00 3.28
5962 7412 3.552604 TGTCAGAAAATAGCGCCAAAC 57.447 42.857 2.29 0.00 0.00 2.93
5964 7414 3.058293 TGTCAGAAAATAGCGCCAAACAG 60.058 43.478 2.29 0.00 0.00 3.16
5966 7416 4.009675 TCAGAAAATAGCGCCAAACAGAT 58.990 39.130 2.29 0.00 0.00 2.90
5967 7417 5.064707 GTCAGAAAATAGCGCCAAACAGATA 59.935 40.000 2.29 0.00 0.00 1.98
5968 7418 5.645929 TCAGAAAATAGCGCCAAACAGATAA 59.354 36.000 2.29 0.00 0.00 1.75
5969 7419 6.150307 TCAGAAAATAGCGCCAAACAGATAAA 59.850 34.615 2.29 0.00 0.00 1.40
5970 7420 6.806249 CAGAAAATAGCGCCAAACAGATAAAA 59.194 34.615 2.29 0.00 0.00 1.52
5971 7421 7.328249 CAGAAAATAGCGCCAAACAGATAAAAA 59.672 33.333 2.29 0.00 0.00 1.94
6006 7456 2.708325 GGGGCAGATCTTCTAACCATCT 59.292 50.000 0.00 0.00 0.00 2.90
6007 7457 3.495806 GGGGCAGATCTTCTAACCATCTG 60.496 52.174 0.00 4.14 44.39 2.90
6008 7458 3.135530 GGGCAGATCTTCTAACCATCTGT 59.864 47.826 9.33 0.00 43.74 3.41
6010 7460 4.574013 GGCAGATCTTCTAACCATCTGTTG 59.426 45.833 9.33 0.00 43.74 3.33
6011 7461 5.181748 GCAGATCTTCTAACCATCTGTTGT 58.818 41.667 9.33 0.00 43.74 3.32
6013 7463 6.402983 GCAGATCTTCTAACCATCTGTTGTTG 60.403 42.308 9.33 0.00 43.74 3.33
6014 7464 6.093219 CAGATCTTCTAACCATCTGTTGTTGG 59.907 42.308 0.00 0.00 39.08 3.77
6015 7465 5.304686 TCTTCTAACCATCTGTTGTTGGT 57.695 39.130 0.00 0.00 45.36 3.67
6016 7466 6.428083 TCTTCTAACCATCTGTTGTTGGTA 57.572 37.500 0.00 0.00 43.36 3.25
6017 7467 6.464222 TCTTCTAACCATCTGTTGTTGGTAG 58.536 40.000 0.00 0.00 43.36 3.18
6019 7469 6.428083 TCTAACCATCTGTTGTTGGTAGAA 57.572 37.500 0.00 0.00 43.36 2.10
6020 7470 6.464222 TCTAACCATCTGTTGTTGGTAGAAG 58.536 40.000 0.00 0.00 43.36 2.85
6021 7471 3.412386 ACCATCTGTTGTTGGTAGAAGC 58.588 45.455 0.00 0.00 42.61 3.86
6022 7472 3.181445 ACCATCTGTTGTTGGTAGAAGCA 60.181 43.478 0.00 0.00 42.61 3.91
6023 7473 3.438087 CCATCTGTTGTTGGTAGAAGCAG 59.562 47.826 0.00 0.00 0.00 4.24
6026 7476 3.070018 CTGTTGTTGGTAGAAGCAGAGG 58.930 50.000 0.00 0.00 0.00 3.69
6027 7477 2.438021 TGTTGTTGGTAGAAGCAGAGGT 59.562 45.455 0.00 0.00 0.00 3.85
6028 7478 2.808543 GTTGTTGGTAGAAGCAGAGGTG 59.191 50.000 0.00 0.00 0.00 4.00
6029 7479 2.325484 TGTTGGTAGAAGCAGAGGTGA 58.675 47.619 0.00 0.00 0.00 4.02
6030 7480 2.703536 TGTTGGTAGAAGCAGAGGTGAA 59.296 45.455 0.00 0.00 0.00 3.18
6031 7481 3.327757 TGTTGGTAGAAGCAGAGGTGAAT 59.672 43.478 0.00 0.00 0.00 2.57
6034 7484 3.840666 TGGTAGAAGCAGAGGTGAATTCT 59.159 43.478 7.05 0.00 36.09 2.40
6035 7485 4.081420 TGGTAGAAGCAGAGGTGAATTCTC 60.081 45.833 7.05 2.70 34.68 2.87
6036 7486 3.625649 AGAAGCAGAGGTGAATTCTCC 57.374 47.619 17.14 17.14 29.67 3.71
6037 7487 2.909006 AGAAGCAGAGGTGAATTCTCCA 59.091 45.455 24.58 0.00 29.67 3.86
6038 7488 3.328931 AGAAGCAGAGGTGAATTCTCCAA 59.671 43.478 24.58 0.00 29.67 3.53
6040 7490 4.313020 AGCAGAGGTGAATTCTCCAAAT 57.687 40.909 24.58 7.74 32.20 2.32
6041 7491 4.268359 AGCAGAGGTGAATTCTCCAAATC 58.732 43.478 24.58 15.14 32.20 2.17
6042 7492 4.012374 GCAGAGGTGAATTCTCCAAATCA 58.988 43.478 24.58 0.00 32.20 2.57
6043 7493 4.142513 GCAGAGGTGAATTCTCCAAATCAC 60.143 45.833 24.58 5.46 41.06 3.06
6045 7495 5.474532 CAGAGGTGAATTCTCCAAATCACAA 59.525 40.000 24.58 0.00 43.02 3.33
6046 7496 5.709164 AGAGGTGAATTCTCCAAATCACAAG 59.291 40.000 24.58 0.00 43.02 3.16
6050 7500 6.385033 GTGAATTCTCCAAATCACAAGGAAG 58.615 40.000 7.05 0.00 41.35 3.46
6051 7501 6.015940 GTGAATTCTCCAAATCACAAGGAAGT 60.016 38.462 7.05 0.00 41.35 3.01
6052 7502 7.174946 GTGAATTCTCCAAATCACAAGGAAGTA 59.825 37.037 7.05 0.00 41.35 2.24
6054 7504 6.877611 TTCTCCAAATCACAAGGAAGTAAC 57.122 37.500 0.00 0.00 0.00 2.50
6055 7505 5.313712 TCTCCAAATCACAAGGAAGTAACC 58.686 41.667 0.00 0.00 0.00 2.85
6056 7506 5.073144 TCTCCAAATCACAAGGAAGTAACCT 59.927 40.000 0.00 0.00 42.69 3.50
6057 7507 5.313712 TCCAAATCACAAGGAAGTAACCTC 58.686 41.667 0.00 0.00 39.62 3.85
6059 7509 5.412904 CCAAATCACAAGGAAGTAACCTCTC 59.587 44.000 0.00 0.00 39.62 3.20
6061 7511 6.441088 AATCACAAGGAAGTAACCTCTCTT 57.559 37.500 0.00 0.00 39.62 2.85
6062 7512 5.215252 TCACAAGGAAGTAACCTCTCTTG 57.785 43.478 0.00 0.00 39.62 3.02
6063 7513 4.654262 TCACAAGGAAGTAACCTCTCTTGT 59.346 41.667 0.00 0.00 40.94 3.16
6064 7514 4.991687 CACAAGGAAGTAACCTCTCTTGTC 59.008 45.833 0.00 0.00 39.60 3.18
6065 7515 4.040584 ACAAGGAAGTAACCTCTCTTGTCC 59.959 45.833 0.00 0.00 38.42 4.02
6066 7516 3.174779 AGGAAGTAACCTCTCTTGTCCC 58.825 50.000 0.00 0.00 34.98 4.46
6067 7517 2.236644 GGAAGTAACCTCTCTTGTCCCC 59.763 54.545 0.00 0.00 0.00 4.81
6069 7519 4.351127 GAAGTAACCTCTCTTGTCCCCTA 58.649 47.826 0.00 0.00 0.00 3.53
6070 7520 4.415224 AGTAACCTCTCTTGTCCCCTAA 57.585 45.455 0.00 0.00 0.00 2.69
6072 7522 4.717280 AGTAACCTCTCTTGTCCCCTAATG 59.283 45.833 0.00 0.00 0.00 1.90
6073 7523 2.482494 ACCTCTCTTGTCCCCTAATGG 58.518 52.381 0.00 0.00 0.00 3.16
6074 7524 1.141858 CCTCTCTTGTCCCCTAATGGC 59.858 57.143 0.00 0.00 0.00 4.40
6075 7525 2.122768 CTCTCTTGTCCCCTAATGGCT 58.877 52.381 0.00 0.00 0.00 4.75
6076 7526 2.507471 CTCTCTTGTCCCCTAATGGCTT 59.493 50.000 0.00 0.00 0.00 4.35
6077 7527 2.505819 TCTCTTGTCCCCTAATGGCTTC 59.494 50.000 0.00 0.00 0.00 3.86
6079 7529 2.919602 TCTTGTCCCCTAATGGCTTCTT 59.080 45.455 0.00 0.00 0.00 2.52
6080 7530 3.054361 TCTTGTCCCCTAATGGCTTCTTC 60.054 47.826 0.00 0.00 0.00 2.87
6082 7532 2.239654 TGTCCCCTAATGGCTTCTTCAG 59.760 50.000 0.00 0.00 0.00 3.02
6083 7533 1.846439 TCCCCTAATGGCTTCTTCAGG 59.154 52.381 0.00 0.00 0.00 3.86
6084 7534 1.566231 CCCCTAATGGCTTCTTCAGGT 59.434 52.381 0.00 0.00 0.00 4.00
6085 7535 2.777692 CCCCTAATGGCTTCTTCAGGTA 59.222 50.000 0.00 0.00 0.00 3.08
6086 7536 3.433740 CCCCTAATGGCTTCTTCAGGTAC 60.434 52.174 0.00 0.00 0.00 3.34
6087 7537 3.456277 CCCTAATGGCTTCTTCAGGTACT 59.544 47.826 0.00 0.00 43.88 2.73
6098 7548 4.660521 AGGTACTGGTCCAGGCAA 57.339 55.556 23.06 5.33 37.18 4.52
6099 7549 2.067197 AGGTACTGGTCCAGGCAAC 58.933 57.895 23.06 16.29 37.18 4.17
6100 7550 0.766674 AGGTACTGGTCCAGGCAACA 60.767 55.000 23.06 0.00 37.18 3.33
6101 7551 0.109723 GGTACTGGTCCAGGCAACAA 59.890 55.000 23.06 0.00 35.51 2.83
6102 7552 1.271926 GGTACTGGTCCAGGCAACAAT 60.272 52.381 23.06 2.51 35.51 2.71
6104 7554 0.478072 ACTGGTCCAGGCAACAATGA 59.522 50.000 23.06 0.00 35.51 2.57
6106 7556 0.251297 TGGTCCAGGCAACAATGAGG 60.251 55.000 0.00 0.00 41.41 3.86
6107 7557 0.038166 GGTCCAGGCAACAATGAGGA 59.962 55.000 0.00 0.00 41.41 3.71
6108 7558 1.341383 GGTCCAGGCAACAATGAGGAT 60.341 52.381 0.00 0.00 41.41 3.24
6109 7559 1.747355 GTCCAGGCAACAATGAGGATG 59.253 52.381 0.00 0.00 41.41 3.51
6110 7560 1.634973 TCCAGGCAACAATGAGGATGA 59.365 47.619 0.00 0.00 41.41 2.92
6111 7561 2.242965 TCCAGGCAACAATGAGGATGAT 59.757 45.455 0.00 0.00 41.41 2.45
6112 7562 2.361119 CCAGGCAACAATGAGGATGATG 59.639 50.000 0.00 0.00 41.41 3.07
6113 7563 3.284617 CAGGCAACAATGAGGATGATGA 58.715 45.455 0.00 0.00 41.41 2.92
6114 7564 3.889538 CAGGCAACAATGAGGATGATGAT 59.110 43.478 0.00 0.00 41.41 2.45
6115 7565 3.889538 AGGCAACAATGAGGATGATGATG 59.110 43.478 0.00 0.00 41.41 3.07
6116 7566 3.887110 GGCAACAATGAGGATGATGATGA 59.113 43.478 0.00 0.00 0.00 2.92
6117 7567 4.340097 GGCAACAATGAGGATGATGATGAA 59.660 41.667 0.00 0.00 0.00 2.57
6118 7568 5.279384 GCAACAATGAGGATGATGATGAAC 58.721 41.667 0.00 0.00 0.00 3.18
6119 7569 5.163591 GCAACAATGAGGATGATGATGAACA 60.164 40.000 0.00 0.00 0.00 3.18
6120 7570 6.461092 GCAACAATGAGGATGATGATGAACAT 60.461 38.462 0.00 0.00 42.47 2.71
6134 7584 5.056480 TGATGAACATCAACGACAGAAAGT 58.944 37.500 14.00 0.00 44.14 2.66
6137 7587 6.912203 TGAACATCAACGACAGAAAGTAAA 57.088 33.333 0.00 0.00 0.00 2.01
6138 7588 7.310072 TGAACATCAACGACAGAAAGTAAAA 57.690 32.000 0.00 0.00 0.00 1.52
6139 7589 7.406553 TGAACATCAACGACAGAAAGTAAAAG 58.593 34.615 0.00 0.00 0.00 2.27
6141 7591 7.548196 ACATCAACGACAGAAAGTAAAAGAA 57.452 32.000 0.00 0.00 0.00 2.52
6143 7593 8.283291 ACATCAACGACAGAAAGTAAAAGAATC 58.717 33.333 0.00 0.00 0.00 2.52
6144 7594 8.499162 CATCAACGACAGAAAGTAAAAGAATCT 58.501 33.333 0.00 0.00 0.00 2.40
6145 7595 8.073355 TCAACGACAGAAAGTAAAAGAATCTC 57.927 34.615 0.00 0.00 0.00 2.75
6146 7596 7.709182 TCAACGACAGAAAGTAAAAGAATCTCA 59.291 33.333 0.00 0.00 0.00 3.27
6147 7597 7.409465 ACGACAGAAAGTAAAAGAATCTCAC 57.591 36.000 0.00 0.00 0.00 3.51
6150 7600 7.382488 CGACAGAAAGTAAAAGAATCTCACTCA 59.618 37.037 0.00 0.00 0.00 3.41
6151 7601 9.213799 GACAGAAAGTAAAAGAATCTCACTCAT 57.786 33.333 0.00 0.00 0.00 2.90
6168 7618 9.424319 TCTCACTCATACACTTTAAGATTTCAC 57.576 33.333 0.00 0.00 0.00 3.18
6169 7619 9.429359 CTCACTCATACACTTTAAGATTTCACT 57.571 33.333 0.00 0.00 0.00 3.41
6170 7620 9.424319 TCACTCATACACTTTAAGATTTCACTC 57.576 33.333 0.00 0.00 0.00 3.51
6172 7622 9.778741 ACTCATACACTTTAAGATTTCACTCAA 57.221 29.630 0.00 0.00 0.00 3.02
6174 7624 9.778741 TCATACACTTTAAGATTTCACTCAACT 57.221 29.630 0.00 0.00 0.00 3.16
6185 7635 7.429633 AGATTTCACTCAACTATATCCAGTCG 58.570 38.462 0.00 0.00 0.00 4.18
6186 7636 6.525578 TTTCACTCAACTATATCCAGTCGT 57.474 37.500 0.00 0.00 0.00 4.34
6187 7637 5.500645 TCACTCAACTATATCCAGTCGTG 57.499 43.478 0.00 0.00 0.00 4.35
6188 7638 4.948004 TCACTCAACTATATCCAGTCGTGT 59.052 41.667 0.00 0.00 0.00 4.49
6191 7641 3.699538 TCAACTATATCCAGTCGTGTGCT 59.300 43.478 0.00 0.00 0.00 4.40
6192 7642 4.159693 TCAACTATATCCAGTCGTGTGCTT 59.840 41.667 0.00 0.00 0.00 3.91
6194 7644 2.604046 ATATCCAGTCGTGTGCTTCC 57.396 50.000 0.00 0.00 0.00 3.46
6195 7645 0.535335 TATCCAGTCGTGTGCTTCCC 59.465 55.000 0.00 0.00 0.00 3.97
6197 7647 1.003355 CCAGTCGTGTGCTTCCCAT 60.003 57.895 0.00 0.00 0.00 4.00
6198 7648 1.021390 CCAGTCGTGTGCTTCCCATC 61.021 60.000 0.00 0.00 0.00 3.51
6199 7649 1.021390 CAGTCGTGTGCTTCCCATCC 61.021 60.000 0.00 0.00 0.00 3.51
6200 7650 1.194781 AGTCGTGTGCTTCCCATCCT 61.195 55.000 0.00 0.00 0.00 3.24
6202 7652 2.401766 CGTGTGCTTCCCATCCTGC 61.402 63.158 0.00 0.00 0.00 4.85
6203 7653 1.303561 GTGTGCTTCCCATCCTGCA 60.304 57.895 0.00 0.00 0.00 4.41
6204 7654 0.895100 GTGTGCTTCCCATCCTGCAA 60.895 55.000 0.00 0.00 37.17 4.08
6205 7655 0.178967 TGTGCTTCCCATCCTGCAAA 60.179 50.000 0.00 0.00 37.17 3.68
6206 7656 0.244721 GTGCTTCCCATCCTGCAAAC 59.755 55.000 0.00 0.00 37.17 2.93
6207 7657 0.112995 TGCTTCCCATCCTGCAAACT 59.887 50.000 0.00 0.00 32.12 2.66
6208 7658 0.529378 GCTTCCCATCCTGCAAACTG 59.471 55.000 0.00 0.00 0.00 3.16
6218 7668 4.972591 GCAAACTGCAGGCGATTT 57.027 50.000 19.93 6.43 44.26 2.17
6220 7670 1.501169 GCAAACTGCAGGCGATTTTT 58.499 45.000 19.93 5.25 44.26 1.94
6222 7672 2.472816 CAAACTGCAGGCGATTTTTGT 58.527 42.857 19.93 0.00 0.00 2.83
6223 7673 2.865551 CAAACTGCAGGCGATTTTTGTT 59.134 40.909 19.93 0.00 0.00 2.83
6225 7675 1.000274 ACTGCAGGCGATTTTTGTTCC 60.000 47.619 19.93 0.00 0.00 3.62
6226 7676 0.316841 TGCAGGCGATTTTTGTTCCC 59.683 50.000 0.00 0.00 0.00 3.97
6227 7677 0.316841 GCAGGCGATTTTTGTTCCCA 59.683 50.000 0.00 0.00 0.00 4.37
6228 7678 1.066929 GCAGGCGATTTTTGTTCCCAT 60.067 47.619 0.00 0.00 0.00 4.00
6229 7679 2.612721 GCAGGCGATTTTTGTTCCCATT 60.613 45.455 0.00 0.00 0.00 3.16
6230 7680 3.253230 CAGGCGATTTTTGTTCCCATTC 58.747 45.455 0.00 0.00 0.00 2.67
6231 7681 3.056607 CAGGCGATTTTTGTTCCCATTCT 60.057 43.478 0.00 0.00 0.00 2.40
6232 7682 3.056607 AGGCGATTTTTGTTCCCATTCTG 60.057 43.478 0.00 0.00 0.00 3.02
6233 7683 3.306019 GGCGATTTTTGTTCCCATTCTGT 60.306 43.478 0.00 0.00 0.00 3.41
6239 7794 8.240682 CGATTTTTGTTCCCATTCTGTATTACA 58.759 33.333 0.00 0.00 0.00 2.41
6244 7799 5.872617 TGTTCCCATTCTGTATTACAACGAG 59.127 40.000 0.00 0.00 0.00 4.18
6250 7805 4.530710 TCTGTATTACAACGAGCACCTT 57.469 40.909 0.00 0.00 0.00 3.50
6251 7806 4.491676 TCTGTATTACAACGAGCACCTTC 58.508 43.478 0.00 0.00 0.00 3.46
6252 7807 3.592059 TGTATTACAACGAGCACCTTCC 58.408 45.455 0.00 0.00 0.00 3.46
6253 7808 2.851263 ATTACAACGAGCACCTTCCA 57.149 45.000 0.00 0.00 0.00 3.53
6255 7810 0.753867 TACAACGAGCACCTTCCACA 59.246 50.000 0.00 0.00 0.00 4.17
6256 7811 0.107410 ACAACGAGCACCTTCCACAA 60.107 50.000 0.00 0.00 0.00 3.33
6257 7812 0.307760 CAACGAGCACCTTCCACAAC 59.692 55.000 0.00 0.00 0.00 3.32
6258 7813 0.107410 AACGAGCACCTTCCACAACA 60.107 50.000 0.00 0.00 0.00 3.33
6259 7814 0.107410 ACGAGCACCTTCCACAACAA 60.107 50.000 0.00 0.00 0.00 2.83
6260 7815 1.021202 CGAGCACCTTCCACAACAAA 58.979 50.000 0.00 0.00 0.00 2.83
6261 7816 1.608590 CGAGCACCTTCCACAACAAAT 59.391 47.619 0.00 0.00 0.00 2.32
6264 7819 4.082787 CGAGCACCTTCCACAACAAATAAT 60.083 41.667 0.00 0.00 0.00 1.28
6287 7842 5.539582 TTGTATCACGTATTTTGGTCTGC 57.460 39.130 0.00 0.00 0.00 4.26
6288 7843 4.570930 TGTATCACGTATTTTGGTCTGCA 58.429 39.130 0.00 0.00 0.00 4.41
6290 7845 4.882671 ATCACGTATTTTGGTCTGCATC 57.117 40.909 0.00 0.00 0.00 3.91
6291 7846 2.670905 TCACGTATTTTGGTCTGCATCG 59.329 45.455 0.00 0.00 0.00 3.84
6292 7847 1.396996 ACGTATTTTGGTCTGCATCGC 59.603 47.619 0.00 0.00 0.00 4.58
6293 7848 1.592110 CGTATTTTGGTCTGCATCGCG 60.592 52.381 0.00 0.00 0.00 5.87
6294 7849 1.396996 GTATTTTGGTCTGCATCGCGT 59.603 47.619 5.77 0.00 0.00 6.01
6296 7851 0.882484 TTTTGGTCTGCATCGCGTGA 60.882 50.000 5.77 0.00 0.00 4.35
6297 7852 0.673333 TTTGGTCTGCATCGCGTGAT 60.673 50.000 5.43 5.43 34.28 3.06
6299 7854 0.174617 TGGTCTGCATCGCGTGATAA 59.825 50.000 11.84 2.24 32.18 1.75
6301 7856 1.536072 GGTCTGCATCGCGTGATAAGA 60.536 52.381 11.84 14.28 32.18 2.10
6302 7857 2.398498 GTCTGCATCGCGTGATAAGAT 58.602 47.619 20.30 0.00 32.29 2.40
6303 7858 2.406691 GTCTGCATCGCGTGATAAGATC 59.593 50.000 20.30 13.18 32.29 2.75
6304 7859 2.034558 TCTGCATCGCGTGATAAGATCA 59.965 45.455 11.84 4.36 36.84 2.92
6305 7860 2.796593 CTGCATCGCGTGATAAGATCAA 59.203 45.455 11.84 0.00 41.69 2.57
6306 7861 2.796593 TGCATCGCGTGATAAGATCAAG 59.203 45.455 11.84 0.00 41.69 3.02
6307 7862 3.052745 GCATCGCGTGATAAGATCAAGA 58.947 45.455 11.84 1.10 41.69 3.02
6309 7864 4.294232 CATCGCGTGATAAGATCAAGAGT 58.706 43.478 11.84 0.00 41.69 3.24
6310 7865 5.452777 CATCGCGTGATAAGATCAAGAGTA 58.547 41.667 11.84 0.00 41.69 2.59
6313 7868 5.756833 TCGCGTGATAAGATCAAGAGTAGTA 59.243 40.000 5.77 0.00 41.69 1.82
6315 7870 6.292973 CGCGTGATAAGATCAAGAGTAGTAGT 60.293 42.308 0.00 0.00 41.69 2.73
6316 7871 6.853872 GCGTGATAAGATCAAGAGTAGTAGTG 59.146 42.308 6.58 0.00 41.69 2.74
6318 7873 8.613482 CGTGATAAGATCAAGAGTAGTAGTGAA 58.387 37.037 0.00 0.00 41.69 3.18
6323 7878 8.485976 AAGATCAAGAGTAGTAGTGAAATTGC 57.514 34.615 0.00 0.00 0.00 3.56
6324 7879 7.615403 AGATCAAGAGTAGTAGTGAAATTGCA 58.385 34.615 0.00 0.00 0.00 4.08
6325 7880 8.097038 AGATCAAGAGTAGTAGTGAAATTGCAA 58.903 33.333 0.00 0.00 0.00 4.08
6327 7882 6.989759 TCAAGAGTAGTAGTGAAATTGCAACA 59.010 34.615 0.00 0.00 0.00 3.33
6328 7883 7.497579 TCAAGAGTAGTAGTGAAATTGCAACAA 59.502 33.333 0.00 0.00 0.00 2.83
6329 7884 7.801716 AGAGTAGTAGTGAAATTGCAACAAA 57.198 32.000 0.00 0.00 0.00 2.83
6333 7888 8.413229 AGTAGTAGTGAAATTGCAACAAATTGT 58.587 29.630 0.00 0.00 38.17 2.71
6334 7889 9.672086 GTAGTAGTGAAATTGCAACAAATTGTA 57.328 29.630 0.00 0.00 38.17 2.41
6336 7891 9.410556 AGTAGTGAAATTGCAACAAATTGTATC 57.589 29.630 0.00 0.00 38.17 2.24
6338 7893 8.659925 AGTGAAATTGCAACAAATTGTATCAA 57.340 26.923 0.00 12.81 38.17 2.57
6339 7894 8.550376 AGTGAAATTGCAACAAATTGTATCAAC 58.450 29.630 0.00 4.20 38.17 3.18
6340 7895 8.333908 GTGAAATTGCAACAAATTGTATCAACA 58.666 29.630 0.00 6.56 38.17 3.33
6343 7898 8.659925 AATTGCAACAAATTGTATCAACAGAA 57.340 26.923 0.00 0.00 38.17 3.02
6345 7900 6.215121 TGCAACAAATTGTATCAACAGAAGG 58.785 36.000 0.00 0.00 38.17 3.46
6346 7901 6.183360 TGCAACAAATTGTATCAACAGAAGGT 60.183 34.615 0.00 0.00 38.17 3.50
6347 7902 6.701400 GCAACAAATTGTATCAACAGAAGGTT 59.299 34.615 0.00 0.00 37.98 3.50
6348 7903 7.865385 GCAACAAATTGTATCAACAGAAGGTTA 59.135 33.333 0.00 0.00 36.44 2.85
6349 7904 9.912634 CAACAAATTGTATCAACAGAAGGTTAT 57.087 29.630 0.00 0.00 37.72 1.89
6356 7911 9.515226 TTGTATCAACAGAAGGTTATTAAAGCT 57.485 29.630 0.00 0.00 39.94 3.74
6366 7921 5.016173 AGGTTATTAAAGCTTGGCATGACA 58.984 37.500 0.00 0.00 40.51 3.58
6367 7922 5.658190 AGGTTATTAAAGCTTGGCATGACAT 59.342 36.000 0.00 0.00 40.51 3.06
6369 7924 7.341769 AGGTTATTAAAGCTTGGCATGACATTA 59.658 33.333 0.00 0.00 40.51 1.90
6370 7925 7.978975 GGTTATTAAAGCTTGGCATGACATTAA 59.021 33.333 0.00 4.66 0.00 1.40
6371 7926 9.023967 GTTATTAAAGCTTGGCATGACATTAAG 57.976 33.333 0.00 0.00 0.00 1.85
6373 7928 5.473066 AAAGCTTGGCATGACATTAAGTT 57.527 34.783 0.00 0.00 0.00 2.66
6374 7929 4.445452 AGCTTGGCATGACATTAAGTTG 57.555 40.909 0.00 0.00 0.00 3.16
6375 7930 3.194116 AGCTTGGCATGACATTAAGTTGG 59.806 43.478 0.00 0.00 0.00 3.77
6376 7931 3.193267 GCTTGGCATGACATTAAGTTGGA 59.807 43.478 0.00 0.00 0.00 3.53
6377 7932 4.142093 GCTTGGCATGACATTAAGTTGGAT 60.142 41.667 0.00 0.00 0.00 3.41
6378 7933 5.625197 GCTTGGCATGACATTAAGTTGGATT 60.625 40.000 0.00 0.00 0.00 3.01
6380 7935 7.473735 TTGGCATGACATTAAGTTGGATTTA 57.526 32.000 0.00 0.00 0.00 1.40
6381 7936 6.862209 TGGCATGACATTAAGTTGGATTTAC 58.138 36.000 0.00 0.00 0.00 2.01
6383 7938 6.096846 GGCATGACATTAAGTTGGATTTACCT 59.903 38.462 0.00 0.00 39.86 3.08
6384 7939 6.974622 GCATGACATTAAGTTGGATTTACCTG 59.025 38.462 0.00 0.00 39.86 4.00
6385 7940 7.148086 GCATGACATTAAGTTGGATTTACCTGA 60.148 37.037 0.00 0.00 39.86 3.86
6387 7942 8.877864 TGACATTAAGTTGGATTTACCTGATT 57.122 30.769 0.00 0.00 39.86 2.57
6388 7943 8.956426 TGACATTAAGTTGGATTTACCTGATTC 58.044 33.333 0.00 0.00 39.86 2.52
6389 7944 9.178758 GACATTAAGTTGGATTTACCTGATTCT 57.821 33.333 0.00 0.00 39.86 2.40
6390 7945 9.533831 ACATTAAGTTGGATTTACCTGATTCTT 57.466 29.630 0.00 0.00 39.86 2.52
6393 7948 7.839680 AAGTTGGATTTACCTGATTCTTTGT 57.160 32.000 0.00 0.00 39.86 2.83
6394 7949 7.219484 AGTTGGATTTACCTGATTCTTTGTG 57.781 36.000 0.00 0.00 39.86 3.33
6395 7950 6.777580 AGTTGGATTTACCTGATTCTTTGTGT 59.222 34.615 0.00 0.00 39.86 3.72
6396 7951 7.287696 AGTTGGATTTACCTGATTCTTTGTGTT 59.712 33.333 0.00 0.00 39.86 3.32
6398 7953 7.004086 TGGATTTACCTGATTCTTTGTGTTCT 58.996 34.615 0.00 0.00 39.86 3.01
6399 7954 7.040478 TGGATTTACCTGATTCTTTGTGTTCTG 60.040 37.037 0.00 0.00 39.86 3.02
6401 7956 2.887152 ACCTGATTCTTTGTGTTCTGGC 59.113 45.455 0.00 0.00 32.25 4.85
6403 7958 4.202461 ACCTGATTCTTTGTGTTCTGGCTA 60.202 41.667 0.00 0.00 32.25 3.93
6404 7959 4.154918 CCTGATTCTTTGTGTTCTGGCTAC 59.845 45.833 0.00 0.00 0.00 3.58
6405 7960 4.072131 TGATTCTTTGTGTTCTGGCTACC 58.928 43.478 0.00 0.00 0.00 3.18
6406 7961 3.857157 TTCTTTGTGTTCTGGCTACCT 57.143 42.857 0.00 0.00 0.00 3.08
6407 7962 3.126001 TCTTTGTGTTCTGGCTACCTG 57.874 47.619 0.00 0.00 0.00 4.00
6408 7963 2.154462 CTTTGTGTTCTGGCTACCTGG 58.846 52.381 0.00 0.00 0.00 4.45
6409 7964 1.429930 TTGTGTTCTGGCTACCTGGA 58.570 50.000 0.00 0.00 0.00 3.86
6410 7965 0.685097 TGTGTTCTGGCTACCTGGAC 59.315 55.000 0.00 0.00 32.45 4.02
6411 7966 0.036294 GTGTTCTGGCTACCTGGACC 60.036 60.000 0.00 0.00 31.01 4.46
6412 7967 0.178903 TGTTCTGGCTACCTGGACCT 60.179 55.000 0.00 0.00 31.01 3.85
6413 7968 0.250513 GTTCTGGCTACCTGGACCTG 59.749 60.000 0.00 3.32 0.00 4.00
6414 7969 0.909610 TTCTGGCTACCTGGACCTGG 60.910 60.000 15.59 15.59 0.00 4.45
6415 7970 1.306141 CTGGCTACCTGGACCTGGA 60.306 63.158 23.36 6.86 0.00 3.86
6416 7971 1.306141 TGGCTACCTGGACCTGGAG 60.306 63.158 23.36 15.89 0.00 3.86
6417 7972 2.736826 GGCTACCTGGACCTGGAGC 61.737 68.421 23.36 22.85 0.00 4.70
6419 7974 1.901085 CTACCTGGACCTGGAGCAC 59.099 63.158 23.36 0.00 0.00 4.40
6420 7975 1.612442 TACCTGGACCTGGAGCACC 60.612 63.158 23.36 0.00 0.00 5.01
6422 7977 3.314331 CTGGACCTGGAGCACCGT 61.314 66.667 0.00 0.00 39.42 4.83
6424 7979 3.311110 GGACCTGGAGCACCGTCA 61.311 66.667 0.00 0.00 39.42 4.35
6426 7981 3.591254 GACCTGGAGCACCGTCACC 62.591 68.421 0.00 0.00 39.42 4.02
6429 8069 2.927856 TGGAGCACCGTCACCCAT 60.928 61.111 0.00 0.00 39.42 4.00
6434 8074 1.741770 GCACCGTCACCCATCTGAC 60.742 63.158 0.00 0.00 37.75 3.51
6442 8082 3.679639 CGTCACCCATCTGACATGAATCA 60.680 47.826 0.00 0.00 40.67 2.57
6507 8157 1.153939 CTTGTCTCCCGCTCGTCAG 60.154 63.158 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.374071 TGTACTGTAGTTCTGTGAGAGACA 58.626 41.667 0.00 0.00 0.00 3.41
160 161 7.728847 AAGCAACATATTATCGCATCTGTAA 57.271 32.000 0.00 0.00 0.00 2.41
267 268 8.138712 AGTACAGATTAGCGATTAGAAAAGAGG 58.861 37.037 0.00 0.00 0.00 3.69
272 273 8.900781 AGTACAGTACAGATTAGCGATTAGAAA 58.099 33.333 13.37 0.00 0.00 2.52
302 303 6.068735 AGAGAAGTGAAAGGGATAGGTAGAGA 60.069 42.308 0.00 0.00 0.00 3.10
303 304 6.133356 AGAGAAGTGAAAGGGATAGGTAGAG 58.867 44.000 0.00 0.00 0.00 2.43
328 514 3.511610 AACCTGGCTTGGCTGGGT 61.512 61.111 20.44 13.65 35.76 4.51
439 625 5.617529 CGCAGATGATTTTGTGCTAACAAGA 60.618 40.000 0.00 0.00 46.66 3.02
441 627 4.215185 TCGCAGATGATTTTGTGCTAACAA 59.785 37.500 0.00 0.00 44.59 2.83
648 835 6.705302 TGATTTACATGCATATCTCCCTCTC 58.295 40.000 0.00 0.00 0.00 3.20
649 836 6.296317 CCTGATTTACATGCATATCTCCCTCT 60.296 42.308 0.00 0.00 0.00 3.69
963 1152 5.592054 CTCCCCTTGTTTTGTTCTCTTTTC 58.408 41.667 0.00 0.00 0.00 2.29
1050 1239 7.165460 TGTACCTTGAGATAATCTGACGAAA 57.835 36.000 0.00 0.00 0.00 3.46
1054 1243 7.500992 TGGAATGTACCTTGAGATAATCTGAC 58.499 38.462 0.00 0.00 0.00 3.51
1154 1363 4.837093 AGGTAAACATCGAGGGATCAAA 57.163 40.909 0.69 0.00 0.00 2.69
1162 1371 7.072030 CAGAAACAAAGAAGGTAAACATCGAG 58.928 38.462 0.00 0.00 0.00 4.04
1172 1381 2.341846 TCGGCAGAAACAAAGAAGGT 57.658 45.000 0.00 0.00 0.00 3.50
1174 1383 4.154918 AGCTTATCGGCAGAAACAAAGAAG 59.845 41.667 0.00 0.00 34.17 2.85
1193 1402 4.107127 TGGTGGGTATAACAACAAGCTT 57.893 40.909 0.00 0.00 31.56 3.74
1197 1406 3.093057 GCCATGGTGGGTATAACAACAA 58.907 45.455 14.67 0.00 39.28 2.83
1198 1407 2.729194 GCCATGGTGGGTATAACAACA 58.271 47.619 14.67 0.00 40.26 3.33
1228 1437 4.142513 GCTCCTAAGCCAGTTCAAAATCTG 60.143 45.833 0.00 0.00 43.10 2.90
1250 1459 5.535753 AATGTCTAAATAAAGGCCCATGC 57.464 39.130 0.00 0.00 0.00 4.06
1350 1559 1.625818 AGTGCCACTTCAGGACTAAGG 59.374 52.381 0.00 0.00 0.00 2.69
1371 1580 4.096532 TGCCAAACATTCTTACAACGACAA 59.903 37.500 0.00 0.00 0.00 3.18
1388 1597 7.946381 TTCTTATGTACCATTACATGCCAAA 57.054 32.000 7.43 0.00 46.53 3.28
1402 1611 6.417191 TGGAAATGACGCTTTCTTATGTAC 57.583 37.500 5.90 0.00 35.81 2.90
1525 1734 3.873910 TGGTTATGCTAACTCTTCCTGC 58.126 45.455 6.18 0.00 0.00 4.85
1526 1735 4.080863 ACCTGGTTATGCTAACTCTTCCTG 60.081 45.833 0.00 0.00 0.00 3.86
1611 1821 1.778017 TTGCCTGGAGCTGCTTGGTA 61.778 55.000 6.82 5.67 44.23 3.25
1663 1874 2.869503 GATCCGGTGTGGCGGAATGT 62.870 60.000 0.00 0.00 37.85 2.71
1702 1913 3.366781 GCTGGATTTTGGAGAAACTGCTC 60.367 47.826 0.00 0.00 0.00 4.26
1966 2177 2.350388 GCCGGCATTTATACATGTTCCG 60.350 50.000 24.80 9.64 32.51 4.30
2047 2258 5.818136 TGCACAGTAAATGGATCTTAAGC 57.182 39.130 0.00 0.00 0.00 3.09
2395 2610 4.658435 AGTTATGGGGCTGAAAAGGTTTTT 59.342 37.500 0.00 0.00 0.00 1.94
2442 2657 2.634453 TGACAAATCTCCAGTCAGAGCA 59.366 45.455 0.00 0.00 37.36 4.26
2446 2661 4.321718 ACATGTGACAAATCTCCAGTCAG 58.678 43.478 0.00 0.00 42.36 3.51
2448 2663 5.695851 AAACATGTGACAAATCTCCAGTC 57.304 39.130 0.00 0.00 0.00 3.51
2487 2702 9.838975 CACTATGATACTCAACTAGAAGCTATG 57.161 37.037 0.00 0.00 0.00 2.23
2560 2775 2.736721 GCTCTAATGTTGTTGAGCGACA 59.263 45.455 0.00 0.00 44.88 4.35
2578 2793 4.153411 TCTAATTACTCCCCTGCTAGCTC 58.847 47.826 17.23 0.00 0.00 4.09
2588 2803 5.906772 TCCCTCCAAATCTAATTACTCCC 57.093 43.478 0.00 0.00 0.00 4.30
2662 2877 4.607293 TCACCACTCCATAGTATGCATC 57.393 45.455 0.19 0.00 33.48 3.91
2779 2994 7.602753 ACTTATGGCAAACTTTAGTGGAATTC 58.397 34.615 0.00 0.00 0.00 2.17
2791 3006 4.082125 CCTTTCAGGACTTATGGCAAACT 58.918 43.478 0.00 0.00 37.67 2.66
2799 3014 6.963322 ACATTCTAAGCCTTTCAGGACTTAT 58.037 36.000 0.00 0.00 37.67 1.73
2997 3212 1.941812 CACAGTTGCCCGTCTTGTC 59.058 57.895 0.00 0.00 0.00 3.18
3311 3526 4.323477 GCAGTGTGCCGGTACCCA 62.323 66.667 20.66 0.00 37.42 4.51
3467 3682 6.267471 TGCTTTGTTCTTTTCTACCATGGAAT 59.733 34.615 21.47 0.00 0.00 3.01
3630 3845 2.883574 CTTTATAAGTGGACGCCGTGA 58.116 47.619 0.00 0.00 0.00 4.35
3666 3881 7.176515 ACAAACACAGTCATCATATTAAAGGCA 59.823 33.333 0.00 0.00 0.00 4.75
3723 3938 5.465056 CGGTGCAAAATTATTGACCAAAACT 59.535 36.000 0.00 0.00 0.00 2.66
3785 5228 5.603596 TGTGTTTTCGTAGCTTCCTTCTTA 58.396 37.500 0.00 0.00 0.00 2.10
3814 5257 7.777095 TCTGCAGTACCTAATGTTTTTGTTTT 58.223 30.769 14.67 0.00 0.00 2.43
3845 5292 8.486210 TGCAAGAGATGAGGTTACTATAACAAT 58.514 33.333 1.47 0.00 0.00 2.71
3984 5431 1.610086 CTGGGGGCTTCCAATTGCA 60.610 57.895 0.00 0.00 36.21 4.08
4020 5467 4.993705 AAGTTCACTCCTTGGTCCAATA 57.006 40.909 4.34 0.00 0.00 1.90
4108 5555 4.557205 GTGGGTATAAATACGGAGCTCAG 58.443 47.826 17.19 14.86 34.11 3.35
4347 5794 7.466746 AATGCACTACCATGATACTTTTGTT 57.533 32.000 0.00 0.00 0.00 2.83
4350 5797 7.394359 ACTGAAATGCACTACCATGATACTTTT 59.606 33.333 0.00 0.00 0.00 2.27
4358 5805 6.252967 TGTTAACTGAAATGCACTACCATG 57.747 37.500 7.22 0.00 0.00 3.66
4378 5825 7.466746 AATGCACTACCATGATACTTTTGTT 57.533 32.000 0.00 0.00 0.00 2.83
4391 5838 6.701145 TTTGTAAACTGAAATGCACTACCA 57.299 33.333 0.00 0.00 0.00 3.25
4392 5839 7.200455 AGTTTTGTAAACTGAAATGCACTACC 58.800 34.615 4.14 0.00 0.00 3.18
4405 5852 4.400884 TGCACCATGACAGTTTTGTAAACT 59.599 37.500 0.00 0.00 37.76 2.66
4406 5853 4.677584 TGCACCATGACAGTTTTGTAAAC 58.322 39.130 0.00 0.00 37.76 2.01
4407 5854 4.991153 TGCACCATGACAGTTTTGTAAA 57.009 36.364 0.00 0.00 37.76 2.01
4408 5855 4.582240 TGATGCACCATGACAGTTTTGTAA 59.418 37.500 0.00 0.00 37.76 2.41
4409 5856 4.023279 GTGATGCACCATGACAGTTTTGTA 60.023 41.667 0.00 0.00 37.76 2.41
4410 5857 2.957680 TGATGCACCATGACAGTTTTGT 59.042 40.909 0.00 0.00 41.18 2.83
4411 5858 3.243468 TGTGATGCACCATGACAGTTTTG 60.243 43.478 0.00 0.00 33.47 2.44
4412 5859 2.957680 TGTGATGCACCATGACAGTTTT 59.042 40.909 0.00 0.00 33.47 2.43
4413 5860 2.585330 TGTGATGCACCATGACAGTTT 58.415 42.857 0.00 0.00 33.47 2.66
4414 5861 2.275134 TGTGATGCACCATGACAGTT 57.725 45.000 0.00 0.00 33.47 3.16
4415 5862 2.275134 TTGTGATGCACCATGACAGT 57.725 45.000 0.00 0.00 38.94 3.55
4416 5863 3.571571 CTTTTGTGATGCACCATGACAG 58.428 45.455 0.00 0.00 38.94 3.51
4417 5864 2.288334 GCTTTTGTGATGCACCATGACA 60.288 45.455 0.00 0.00 36.31 3.58
4418 5865 2.029649 AGCTTTTGTGATGCACCATGAC 60.030 45.455 0.00 0.00 32.73 3.06
4419 5866 2.241160 AGCTTTTGTGATGCACCATGA 58.759 42.857 0.00 0.00 32.73 3.07
4420 5867 2.736144 AGCTTTTGTGATGCACCATG 57.264 45.000 0.00 0.00 32.73 3.66
4421 5868 3.756933 AAAGCTTTTGTGATGCACCAT 57.243 38.095 5.69 0.00 32.73 3.55
4444 5891 4.023279 TCGTGCAAGATGTATTGTTTTGCT 60.023 37.500 0.00 0.00 43.29 3.91
4455 5902 2.479566 AGATTGGTCGTGCAAGATGT 57.520 45.000 5.42 0.00 0.00 3.06
4509 5956 4.082125 CAGATAAAGCTTGGGAAGTTGGT 58.918 43.478 0.00 0.00 0.00 3.67
4552 5999 7.391554 TGATTTGTCTATATGCTTATCTTGGGC 59.608 37.037 0.00 0.00 0.00 5.36
4620 6068 4.003648 GGTAGTTGCAAATGAGTGTAGCT 58.996 43.478 10.14 0.00 0.00 3.32
4672 6120 8.335532 ACATTGACGATAAGGAATTCAGAAAA 57.664 30.769 7.93 0.00 0.00 2.29
4732 6180 8.793592 CTTTATATATAAAGTGGGGTGAAAGCC 58.206 37.037 26.92 0.00 46.70 4.35
4733 6181 8.297426 GCTTTATATATAAAGTGGGGTGAAAGC 58.703 37.037 31.63 19.53 46.78 3.51
4734 6182 9.349713 TGCTTTATATATAAAGTGGGGTGAAAG 57.650 33.333 31.63 15.33 46.78 2.62
4735 6183 9.702253 TTGCTTTATATATAAAGTGGGGTGAAA 57.298 29.630 31.63 13.90 46.78 2.69
4740 6188 7.590279 CGGTTTGCTTTATATATAAAGTGGGG 58.410 38.462 31.63 19.22 46.78 4.96
4741 6189 7.081976 GCGGTTTGCTTTATATATAAAGTGGG 58.918 38.462 31.63 20.97 46.78 4.61
4742 6190 7.081976 GGCGGTTTGCTTTATATATAAAGTGG 58.918 38.462 31.63 20.51 46.78 4.00
4743 6191 7.081976 GGGCGGTTTGCTTTATATATAAAGTG 58.918 38.462 31.63 20.64 46.78 3.16
4744 6192 6.072893 CGGGCGGTTTGCTTTATATATAAAGT 60.073 38.462 31.63 0.00 46.78 2.66
4746 6194 5.996513 TCGGGCGGTTTGCTTTATATATAAA 59.003 36.000 15.47 15.47 45.43 1.40
4747 6195 5.549347 TCGGGCGGTTTGCTTTATATATAA 58.451 37.500 0.81 0.81 45.43 0.98
4748 6196 5.149973 TCGGGCGGTTTGCTTTATATATA 57.850 39.130 0.00 0.00 45.43 0.86
4749 6197 4.000988 CTCGGGCGGTTTGCTTTATATAT 58.999 43.478 0.00 0.00 45.43 0.86
4750 6198 3.395639 CTCGGGCGGTTTGCTTTATATA 58.604 45.455 0.00 0.00 45.43 0.86
4752 6200 1.658994 CTCGGGCGGTTTGCTTTATA 58.341 50.000 0.00 0.00 45.43 0.98
4754 6202 2.329614 GCTCGGGCGGTTTGCTTTA 61.330 57.895 0.00 0.00 45.43 1.85
4755 6203 3.670377 GCTCGGGCGGTTTGCTTT 61.670 61.111 0.00 0.00 45.43 3.51
4760 6208 3.860930 ATTGTGGCTCGGGCGGTTT 62.861 57.895 0.00 0.00 39.81 3.27
4761 6209 4.344865 ATTGTGGCTCGGGCGGTT 62.345 61.111 0.00 0.00 39.81 4.44
4762 6210 4.778143 GATTGTGGCTCGGGCGGT 62.778 66.667 0.00 0.00 39.81 5.68
4764 6212 2.514592 ATGATTGTGGCTCGGGCG 60.515 61.111 0.00 0.00 39.81 6.13
4765 6213 2.189499 GGATGATTGTGGCTCGGGC 61.189 63.158 0.00 0.00 37.82 6.13
4766 6214 0.394216 TTGGATGATTGTGGCTCGGG 60.394 55.000 0.00 0.00 0.00 5.14
4767 6215 1.133025 GTTTGGATGATTGTGGCTCGG 59.867 52.381 0.00 0.00 0.00 4.63
4768 6216 1.811965 TGTTTGGATGATTGTGGCTCG 59.188 47.619 0.00 0.00 0.00 5.03
4769 6217 2.557924 TGTGTTTGGATGATTGTGGCTC 59.442 45.455 0.00 0.00 0.00 4.70
4771 6219 2.353011 CCTGTGTTTGGATGATTGTGGC 60.353 50.000 0.00 0.00 0.00 5.01
4772 6220 2.353011 GCCTGTGTTTGGATGATTGTGG 60.353 50.000 0.00 0.00 0.00 4.17
4774 6222 2.596346 TGCCTGTGTTTGGATGATTGT 58.404 42.857 0.00 0.00 0.00 2.71
4775 6223 3.880047 ATGCCTGTGTTTGGATGATTG 57.120 42.857 0.00 0.00 0.00 2.67
4778 6226 5.372343 AGTATATGCCTGTGTTTGGATGA 57.628 39.130 0.00 0.00 0.00 2.92
4782 6230 4.526970 AGGAAGTATATGCCTGTGTTTGG 58.473 43.478 0.00 0.00 0.00 3.28
4783 6231 7.047891 TCTAAGGAAGTATATGCCTGTGTTTG 58.952 38.462 0.00 0.00 31.06 2.93
4784 6232 7.195374 TCTAAGGAAGTATATGCCTGTGTTT 57.805 36.000 0.00 0.00 31.06 2.83
4785 6233 6.808321 TCTAAGGAAGTATATGCCTGTGTT 57.192 37.500 0.00 0.00 31.06 3.32
4786 6234 6.808321 TTCTAAGGAAGTATATGCCTGTGT 57.192 37.500 0.00 0.00 31.06 3.72
4800 6248 0.685097 ACTGCCGTGCTTCTAAGGAA 59.315 50.000 0.00 0.00 0.00 3.36
4801 6249 0.685097 AACTGCCGTGCTTCTAAGGA 59.315 50.000 0.00 0.00 0.00 3.36
4802 6250 1.523758 AAACTGCCGTGCTTCTAAGG 58.476 50.000 0.00 0.00 0.00 2.69
4803 6251 2.548057 TGAAAACTGCCGTGCTTCTAAG 59.452 45.455 5.39 0.00 0.00 2.18
4810 6258 0.318955 AAGCATGAAAACTGCCGTGC 60.319 50.000 0.00 0.00 43.56 5.34
4813 6261 3.429085 GTCATAAGCATGAAAACTGCCG 58.571 45.455 0.00 0.00 42.79 5.69
4815 6263 4.708726 AGGTCATAAGCATGAAAACTGC 57.291 40.909 0.00 0.00 42.79 4.40
4866 6314 2.604046 CCTTTGGAGGAATCGTCGAT 57.396 50.000 0.75 0.75 46.74 3.59
4887 6335 6.876257 ACTTATGGACTGCTTCTAAACTTCTG 59.124 38.462 0.00 0.00 0.00 3.02
4929 6377 3.371595 GGAATACTTCTTTGGGCAGGCTA 60.372 47.826 0.00 0.00 0.00 3.93
5061 6509 1.537776 CGTCTCAGATCCTGTGGATGC 60.538 57.143 3.57 0.00 43.27 3.91
5184 6632 6.984474 GGTTTATGTTAGCTGCTACACTCATA 59.016 38.462 9.27 12.26 0.00 2.15
5227 6675 2.286872 CTCCAAGGATGTGCTGTCATC 58.713 52.381 8.01 8.01 42.20 2.92
5322 6770 1.535462 GCGCCAATCACTTTGTACTGT 59.465 47.619 0.00 0.00 33.15 3.55
5358 6806 3.458118 TGGATAGGGTTGATCCGTCAATT 59.542 43.478 0.00 0.00 45.46 2.32
5432 6880 9.520204 AATGCAAACTATATTATGTTTCTGTGC 57.480 29.630 0.00 0.00 34.60 4.57
5462 6910 9.282569 CAAACCCTGGATTTCAAATGAATTTAA 57.717 29.630 0.00 0.00 33.54 1.52
5474 6922 6.596309 AAGAAAGATCAAACCCTGGATTTC 57.404 37.500 0.00 0.00 0.00 2.17
5477 6925 5.397360 ACAAAGAAAGATCAAACCCTGGAT 58.603 37.500 0.00 0.00 0.00 3.41
5499 6947 5.524511 TGTATCTGCACGTCAAATACAAC 57.475 39.130 10.01 0.00 31.70 3.32
5500 6948 5.064579 CCATGTATCTGCACGTCAAATACAA 59.935 40.000 14.07 3.85 36.65 2.41
5501 6949 4.570369 CCATGTATCTGCACGTCAAATACA 59.430 41.667 13.06 13.06 37.26 2.29
5504 6952 2.945008 CCCATGTATCTGCACGTCAAAT 59.055 45.455 0.00 0.00 0.00 2.32
5529 6977 7.403671 GTCCTAACCTTTCCCTTAAGATCTTT 58.596 38.462 14.36 0.00 0.00 2.52
5556 7004 4.645588 AGTATCTATTATACTCCAGCCGCC 59.354 45.833 0.00 0.00 29.47 6.13
5601 7049 7.615757 TCTCTCCTAAGTCACATTCTTACATGA 59.384 37.037 0.00 0.00 0.00 3.07
5661 7109 2.952310 AGTGCTTCTTTCTTTGGTGGTC 59.048 45.455 0.00 0.00 0.00 4.02
5729 7179 9.600432 ATGTAACATAATATTTTGGTAGGCCAT 57.400 29.630 5.01 5.62 45.56 4.40
5757 7207 1.693606 AGCAAAAAGGGTGGGAATGTG 59.306 47.619 0.00 0.00 0.00 3.21
5817 7267 4.746535 TTGTCTTGTCCACAGTGTAAGA 57.253 40.909 0.00 0.00 0.00 2.10
5819 7269 4.839121 AGTTTGTCTTGTCCACAGTGTAA 58.161 39.130 0.00 0.00 0.00 2.41
5826 7276 3.973657 TCGTAGAGTTTGTCTTGTCCAC 58.026 45.455 0.00 0.00 36.64 4.02
5878 7328 5.941647 TCTCTGCACATTGATTCTTCATGAA 59.058 36.000 8.12 8.12 39.24 2.57
5879 7329 5.493809 TCTCTGCACATTGATTCTTCATGA 58.506 37.500 0.00 0.00 0.00 3.07
5880 7330 5.354513 ACTCTCTGCACATTGATTCTTCATG 59.645 40.000 0.00 0.00 0.00 3.07
5881 7331 5.354513 CACTCTCTGCACATTGATTCTTCAT 59.645 40.000 0.00 0.00 0.00 2.57
5882 7332 4.694037 CACTCTCTGCACATTGATTCTTCA 59.306 41.667 0.00 0.00 0.00 3.02
5883 7333 4.437121 GCACTCTCTGCACATTGATTCTTC 60.437 45.833 0.00 0.00 46.29 2.87
5884 7334 3.439476 GCACTCTCTGCACATTGATTCTT 59.561 43.478 0.00 0.00 46.29 2.52
5885 7335 3.008330 GCACTCTCTGCACATTGATTCT 58.992 45.455 0.00 0.00 46.29 2.40
5886 7336 3.402058 GCACTCTCTGCACATTGATTC 57.598 47.619 0.00 0.00 46.29 2.52
5901 7351 6.806751 TGTAGTTCTAGATAACATGGCACTC 58.193 40.000 0.00 0.00 0.00 3.51
5935 7385 4.332819 GGCGCTATTTTCTGACATGTTAGT 59.667 41.667 16.43 1.08 0.00 2.24
5936 7386 4.332543 TGGCGCTATTTTCTGACATGTTAG 59.667 41.667 11.29 11.29 0.00 2.34
5937 7387 4.257731 TGGCGCTATTTTCTGACATGTTA 58.742 39.130 7.64 0.00 0.00 2.41
5941 7391 3.505680 TGTTTGGCGCTATTTTCTGACAT 59.494 39.130 7.64 0.00 0.00 3.06
5943 7393 3.188460 TCTGTTTGGCGCTATTTTCTGAC 59.812 43.478 7.64 0.00 0.00 3.51
5944 7394 3.407698 TCTGTTTGGCGCTATTTTCTGA 58.592 40.909 7.64 0.75 0.00 3.27
5946 7396 6.509418 TTTATCTGTTTGGCGCTATTTTCT 57.491 33.333 7.64 0.00 0.00 2.52
5969 7419 3.425122 CCCCCGGCCGTATATTTTT 57.575 52.632 26.12 0.00 0.00 1.94
5984 7434 1.213296 TGGTTAGAAGATCTGCCCCC 58.787 55.000 0.00 0.00 0.00 5.40
5985 7435 2.708325 AGATGGTTAGAAGATCTGCCCC 59.292 50.000 0.00 0.00 0.00 5.80
5986 7436 3.135530 ACAGATGGTTAGAAGATCTGCCC 59.864 47.826 0.00 0.00 44.70 5.36
5988 7438 5.181748 ACAACAGATGGTTAGAAGATCTGC 58.818 41.667 0.00 0.00 44.70 4.26
5989 7439 6.093219 CCAACAACAGATGGTTAGAAGATCTG 59.907 42.308 0.00 0.00 45.78 2.90
5991 7441 6.428385 CCAACAACAGATGGTTAGAAGATC 57.572 41.667 0.00 0.00 37.72 2.75
6001 7451 3.411446 TGCTTCTACCAACAACAGATGG 58.589 45.455 0.00 0.00 42.60 3.51
6002 7452 4.318332 TCTGCTTCTACCAACAACAGATG 58.682 43.478 0.00 0.00 0.00 2.90
6006 7456 2.438021 ACCTCTGCTTCTACCAACAACA 59.562 45.455 0.00 0.00 0.00 3.33
6007 7457 2.808543 CACCTCTGCTTCTACCAACAAC 59.191 50.000 0.00 0.00 0.00 3.32
6008 7458 2.703536 TCACCTCTGCTTCTACCAACAA 59.296 45.455 0.00 0.00 0.00 2.83
6010 7460 3.402628 TTCACCTCTGCTTCTACCAAC 57.597 47.619 0.00 0.00 0.00 3.77
6011 7461 4.287067 AGAATTCACCTCTGCTTCTACCAA 59.713 41.667 8.44 0.00 0.00 3.67
6013 7463 4.438148 GAGAATTCACCTCTGCTTCTACC 58.562 47.826 8.44 0.00 0.00 3.18
6014 7464 4.081420 TGGAGAATTCACCTCTGCTTCTAC 60.081 45.833 20.70 0.00 32.83 2.59
6015 7465 4.096681 TGGAGAATTCACCTCTGCTTCTA 58.903 43.478 20.70 0.00 32.83 2.10
6016 7466 2.909006 TGGAGAATTCACCTCTGCTTCT 59.091 45.455 20.70 0.00 32.83 2.85
6017 7467 3.340814 TGGAGAATTCACCTCTGCTTC 57.659 47.619 20.70 0.81 32.83 3.86
6019 7469 3.795688 TTTGGAGAATTCACCTCTGCT 57.204 42.857 20.70 0.00 32.83 4.24
6020 7470 4.012374 TGATTTGGAGAATTCACCTCTGC 58.988 43.478 20.70 9.92 0.00 4.26
6021 7471 5.005740 TGTGATTTGGAGAATTCACCTCTG 58.994 41.667 20.70 0.00 39.88 3.35
6022 7472 5.246981 TGTGATTTGGAGAATTCACCTCT 57.753 39.130 20.70 7.20 39.88 3.69
6023 7473 5.105997 CCTTGTGATTTGGAGAATTCACCTC 60.106 44.000 20.70 11.81 39.88 3.85
6026 7476 5.964958 TCCTTGTGATTTGGAGAATTCAC 57.035 39.130 8.44 0.52 40.54 3.18
6027 7477 6.070656 ACTTCCTTGTGATTTGGAGAATTCA 58.929 36.000 8.44 0.00 0.00 2.57
6028 7478 6.581171 ACTTCCTTGTGATTTGGAGAATTC 57.419 37.500 0.00 0.00 0.00 2.17
6029 7479 7.039714 GGTTACTTCCTTGTGATTTGGAGAATT 60.040 37.037 0.00 0.00 0.00 2.17
6030 7480 6.434340 GGTTACTTCCTTGTGATTTGGAGAAT 59.566 38.462 0.00 0.00 0.00 2.40
6031 7481 5.768164 GGTTACTTCCTTGTGATTTGGAGAA 59.232 40.000 0.00 0.00 0.00 2.87
6034 7484 5.073144 AGAGGTTACTTCCTTGTGATTTGGA 59.927 40.000 0.00 0.00 38.02 3.53
6035 7485 5.316987 AGAGGTTACTTCCTTGTGATTTGG 58.683 41.667 0.00 0.00 38.02 3.28
6036 7486 6.234177 AGAGAGGTTACTTCCTTGTGATTTG 58.766 40.000 0.00 0.00 38.02 2.32
6037 7487 6.441088 AGAGAGGTTACTTCCTTGTGATTT 57.559 37.500 0.00 0.00 38.02 2.17
6038 7488 6.183361 ACAAGAGAGGTTACTTCCTTGTGATT 60.183 38.462 20.91 5.99 42.56 2.57
6040 7490 4.654262 ACAAGAGAGGTTACTTCCTTGTGA 59.346 41.667 20.91 0.00 42.56 3.58
6041 7491 4.962155 ACAAGAGAGGTTACTTCCTTGTG 58.038 43.478 20.91 6.90 42.56 3.33
6042 7492 4.040584 GGACAAGAGAGGTTACTTCCTTGT 59.959 45.833 21.36 21.36 44.63 3.16
6043 7493 4.563786 GGGACAAGAGAGGTTACTTCCTTG 60.564 50.000 17.24 17.24 39.84 3.61
6045 7495 3.174779 GGGACAAGAGAGGTTACTTCCT 58.825 50.000 0.00 0.00 40.97 3.36
6046 7496 2.236644 GGGGACAAGAGAGGTTACTTCC 59.763 54.545 0.00 0.00 0.00 3.46
6050 7500 4.141688 CCATTAGGGGACAAGAGAGGTTAC 60.142 50.000 0.00 0.00 0.00 2.50
6051 7501 4.037927 CCATTAGGGGACAAGAGAGGTTA 58.962 47.826 0.00 0.00 0.00 2.85
6052 7502 2.846827 CCATTAGGGGACAAGAGAGGTT 59.153 50.000 0.00 0.00 0.00 3.50
6054 7504 1.141858 GCCATTAGGGGACAAGAGAGG 59.858 57.143 0.00 0.00 37.04 3.69
6055 7505 2.122768 AGCCATTAGGGGACAAGAGAG 58.877 52.381 0.00 0.00 37.04 3.20
6056 7506 2.270434 AGCCATTAGGGGACAAGAGA 57.730 50.000 0.00 0.00 37.04 3.10
6057 7507 2.507471 AGAAGCCATTAGGGGACAAGAG 59.493 50.000 0.00 0.00 37.04 2.85
6059 7509 3.282885 GAAGAAGCCATTAGGGGACAAG 58.717 50.000 0.00 0.00 37.04 3.16
6061 7511 2.239654 CTGAAGAAGCCATTAGGGGACA 59.760 50.000 0.00 0.00 37.04 4.02
6062 7512 2.422093 CCTGAAGAAGCCATTAGGGGAC 60.422 54.545 0.00 0.00 37.04 4.46
6063 7513 1.846439 CCTGAAGAAGCCATTAGGGGA 59.154 52.381 0.00 0.00 37.04 4.81
6064 7514 1.566231 ACCTGAAGAAGCCATTAGGGG 59.434 52.381 0.00 0.00 37.04 4.79
6065 7515 3.456277 AGTACCTGAAGAAGCCATTAGGG 59.544 47.826 0.00 0.00 40.85 3.53
6066 7516 4.446371 CAGTACCTGAAGAAGCCATTAGG 58.554 47.826 0.00 0.00 32.44 2.69
6067 7517 4.080863 ACCAGTACCTGAAGAAGCCATTAG 60.081 45.833 0.00 0.00 32.44 1.73
6069 7519 2.644798 ACCAGTACCTGAAGAAGCCATT 59.355 45.455 0.00 0.00 32.44 3.16
6070 7520 2.237392 GACCAGTACCTGAAGAAGCCAT 59.763 50.000 0.00 0.00 32.44 4.40
6072 7522 1.066071 GGACCAGTACCTGAAGAAGCC 60.066 57.143 0.00 0.00 32.44 4.35
6073 7523 1.623811 TGGACCAGTACCTGAAGAAGC 59.376 52.381 0.00 0.00 32.44 3.86
6074 7524 2.234908 CCTGGACCAGTACCTGAAGAAG 59.765 54.545 20.24 0.00 32.44 2.85
6075 7525 2.257207 CCTGGACCAGTACCTGAAGAA 58.743 52.381 20.24 0.00 32.44 2.52
6076 7526 1.938585 CCTGGACCAGTACCTGAAGA 58.061 55.000 20.24 0.00 32.44 2.87
6077 7527 0.250513 GCCTGGACCAGTACCTGAAG 59.749 60.000 20.24 3.39 32.44 3.02
6079 7529 0.472925 TTGCCTGGACCAGTACCTGA 60.473 55.000 20.24 0.00 32.44 3.86
6080 7530 0.321653 GTTGCCTGGACCAGTACCTG 60.322 60.000 20.24 5.57 0.00 4.00
6082 7532 0.109723 TTGTTGCCTGGACCAGTACC 59.890 55.000 20.24 8.67 0.00 3.34
6083 7533 1.812571 CATTGTTGCCTGGACCAGTAC 59.187 52.381 20.24 14.52 0.00 2.73
6084 7534 1.702401 TCATTGTTGCCTGGACCAGTA 59.298 47.619 20.24 6.18 0.00 2.74
6085 7535 0.478072 TCATTGTTGCCTGGACCAGT 59.522 50.000 20.24 0.00 0.00 4.00
6086 7536 1.171308 CTCATTGTTGCCTGGACCAG 58.829 55.000 15.15 15.15 0.00 4.00
6087 7537 0.251297 CCTCATTGTTGCCTGGACCA 60.251 55.000 0.00 0.00 0.00 4.02
6089 7539 1.747355 CATCCTCATTGTTGCCTGGAC 59.253 52.381 0.00 0.00 0.00 4.02
6090 7540 1.634973 TCATCCTCATTGTTGCCTGGA 59.365 47.619 0.00 0.00 0.00 3.86
6091 7541 2.133281 TCATCCTCATTGTTGCCTGG 57.867 50.000 0.00 0.00 0.00 4.45
6092 7542 3.284617 TCATCATCCTCATTGTTGCCTG 58.715 45.455 0.00 0.00 0.00 4.85
6093 7543 3.657398 TCATCATCCTCATTGTTGCCT 57.343 42.857 0.00 0.00 0.00 4.75
6094 7544 3.887110 TCATCATCATCCTCATTGTTGCC 59.113 43.478 0.00 0.00 0.00 4.52
6095 7545 5.163591 TGTTCATCATCATCCTCATTGTTGC 60.164 40.000 0.00 0.00 0.00 4.17
6110 7560 5.702670 ACTTTCTGTCGTTGATGTTCATCAT 59.297 36.000 14.88 0.00 39.77 2.45
6111 7561 5.056480 ACTTTCTGTCGTTGATGTTCATCA 58.944 37.500 10.88 10.88 0.00 3.07
6112 7562 5.597813 ACTTTCTGTCGTTGATGTTCATC 57.402 39.130 5.91 5.91 0.00 2.92
6113 7563 7.490962 TTTACTTTCTGTCGTTGATGTTCAT 57.509 32.000 0.00 0.00 0.00 2.57
6114 7564 6.912203 TTTACTTTCTGTCGTTGATGTTCA 57.088 33.333 0.00 0.00 0.00 3.18
6115 7565 7.627340 TCTTTTACTTTCTGTCGTTGATGTTC 58.373 34.615 0.00 0.00 0.00 3.18
6116 7566 7.548196 TCTTTTACTTTCTGTCGTTGATGTT 57.452 32.000 0.00 0.00 0.00 2.71
6117 7567 7.548196 TTCTTTTACTTTCTGTCGTTGATGT 57.452 32.000 0.00 0.00 0.00 3.06
6118 7568 8.499162 AGATTCTTTTACTTTCTGTCGTTGATG 58.501 33.333 0.00 0.00 0.00 3.07
6119 7569 8.608844 AGATTCTTTTACTTTCTGTCGTTGAT 57.391 30.769 0.00 0.00 0.00 2.57
6120 7570 7.709182 TGAGATTCTTTTACTTTCTGTCGTTGA 59.291 33.333 0.00 0.00 0.00 3.18
6122 7572 7.711339 AGTGAGATTCTTTTACTTTCTGTCGTT 59.289 33.333 0.00 0.00 0.00 3.85
6143 7593 9.429359 AGTGAAATCTTAAAGTGTATGAGTGAG 57.571 33.333 0.00 0.00 0.00 3.51
6144 7594 9.424319 GAGTGAAATCTTAAAGTGTATGAGTGA 57.576 33.333 0.00 0.00 0.00 3.41
6145 7595 9.208022 TGAGTGAAATCTTAAAGTGTATGAGTG 57.792 33.333 0.00 0.00 0.00 3.51
6146 7596 9.778741 TTGAGTGAAATCTTAAAGTGTATGAGT 57.221 29.630 0.00 0.00 0.00 3.41
6159 7609 7.923344 CGACTGGATATAGTTGAGTGAAATCTT 59.077 37.037 0.00 0.00 34.59 2.40
6160 7610 7.068839 ACGACTGGATATAGTTGAGTGAAATCT 59.931 37.037 0.00 0.00 35.93 2.40
6161 7611 7.168302 CACGACTGGATATAGTTGAGTGAAATC 59.832 40.741 0.00 0.00 35.93 2.17
6164 7614 5.417894 ACACGACTGGATATAGTTGAGTGAA 59.582 40.000 12.62 0.00 35.46 3.18
6165 7615 4.948004 ACACGACTGGATATAGTTGAGTGA 59.052 41.667 12.62 0.00 35.46 3.41
6168 7618 4.045104 GCACACGACTGGATATAGTTGAG 58.955 47.826 0.00 0.00 35.93 3.02
6169 7619 3.699538 AGCACACGACTGGATATAGTTGA 59.300 43.478 0.00 0.00 35.93 3.18
6170 7620 4.046938 AGCACACGACTGGATATAGTTG 57.953 45.455 0.00 0.00 37.94 3.16
6172 7622 3.068307 GGAAGCACACGACTGGATATAGT 59.932 47.826 0.00 0.00 0.00 2.12
6173 7623 3.553096 GGGAAGCACACGACTGGATATAG 60.553 52.174 0.00 0.00 0.00 1.31
6174 7624 2.364324 GGGAAGCACACGACTGGATATA 59.636 50.000 0.00 0.00 0.00 0.86
6176 7626 0.535335 GGGAAGCACACGACTGGATA 59.465 55.000 0.00 0.00 0.00 2.59
6177 7627 1.296715 GGGAAGCACACGACTGGAT 59.703 57.895 0.00 0.00 0.00 3.41
6178 7628 1.480212 ATGGGAAGCACACGACTGGA 61.480 55.000 0.00 0.00 0.00 3.86
6179 7629 1.003355 ATGGGAAGCACACGACTGG 60.003 57.895 0.00 0.00 0.00 4.00
6180 7630 1.021390 GGATGGGAAGCACACGACTG 61.021 60.000 0.00 0.00 0.00 3.51
6181 7631 1.194781 AGGATGGGAAGCACACGACT 61.195 55.000 0.00 0.00 0.00 4.18
6183 7633 1.296392 CAGGATGGGAAGCACACGA 59.704 57.895 0.00 0.00 0.00 4.35
6184 7634 2.401766 GCAGGATGGGAAGCACACG 61.402 63.158 0.00 0.00 35.86 4.49
6185 7635 0.895100 TTGCAGGATGGGAAGCACAC 60.895 55.000 0.00 0.00 36.62 3.82
6186 7636 0.178967 TTTGCAGGATGGGAAGCACA 60.179 50.000 0.00 0.00 36.62 4.57
6187 7637 0.244721 GTTTGCAGGATGGGAAGCAC 59.755 55.000 0.00 0.00 36.62 4.40
6188 7638 0.112995 AGTTTGCAGGATGGGAAGCA 59.887 50.000 0.00 0.00 35.86 3.91
6191 7641 2.657297 GCAGTTTGCAGGATGGGAA 58.343 52.632 0.00 0.00 44.26 3.97
6192 7642 4.421365 GCAGTTTGCAGGATGGGA 57.579 55.556 0.00 0.00 44.26 4.37
6202 7652 2.472816 ACAAAAATCGCCTGCAGTTTG 58.527 42.857 18.48 18.48 33.31 2.93
6203 7653 2.888834 ACAAAAATCGCCTGCAGTTT 57.111 40.000 13.81 3.45 0.00 2.66
6204 7654 2.545742 GGAACAAAAATCGCCTGCAGTT 60.546 45.455 13.81 0.00 0.00 3.16
6205 7655 1.000274 GGAACAAAAATCGCCTGCAGT 60.000 47.619 13.81 0.00 0.00 4.40
6206 7656 1.669795 GGGAACAAAAATCGCCTGCAG 60.670 52.381 6.78 6.78 0.00 4.41
6207 7657 0.316841 GGGAACAAAAATCGCCTGCA 59.683 50.000 0.00 0.00 0.00 4.41
6208 7658 0.316841 TGGGAACAAAAATCGCCTGC 59.683 50.000 0.00 0.00 37.44 4.85
6222 7672 4.873827 GCTCGTTGTAATACAGAATGGGAA 59.126 41.667 0.00 0.00 43.62 3.97
6223 7673 4.081365 TGCTCGTTGTAATACAGAATGGGA 60.081 41.667 0.00 0.00 43.62 4.37
6225 7675 4.034048 GGTGCTCGTTGTAATACAGAATGG 59.966 45.833 0.00 0.00 43.62 3.16
6226 7676 4.870426 AGGTGCTCGTTGTAATACAGAATG 59.130 41.667 0.00 0.00 46.00 2.67
6227 7677 5.086104 AGGTGCTCGTTGTAATACAGAAT 57.914 39.130 0.00 0.00 0.00 2.40
6228 7678 4.530710 AGGTGCTCGTTGTAATACAGAA 57.469 40.909 0.00 0.00 0.00 3.02
6229 7679 4.491676 GAAGGTGCTCGTTGTAATACAGA 58.508 43.478 0.00 0.00 0.00 3.41
6230 7680 3.617263 GGAAGGTGCTCGTTGTAATACAG 59.383 47.826 0.00 0.00 0.00 2.74
6231 7681 3.007074 TGGAAGGTGCTCGTTGTAATACA 59.993 43.478 0.00 0.00 0.00 2.29
6232 7682 3.370061 GTGGAAGGTGCTCGTTGTAATAC 59.630 47.826 0.00 0.00 0.00 1.89
6233 7683 3.007074 TGTGGAAGGTGCTCGTTGTAATA 59.993 43.478 0.00 0.00 0.00 0.98
6239 7794 0.107410 TGTTGTGGAAGGTGCTCGTT 60.107 50.000 0.00 0.00 0.00 3.85
6244 7799 6.226988 CAAATTATTTGTTGTGGAAGGTGC 57.773 37.500 9.33 0.00 35.94 5.01
6261 7816 8.178964 GCAGACCAAAATACGTGATACAAATTA 58.821 33.333 0.00 0.00 0.00 1.40
6264 7819 5.470437 TGCAGACCAAAATACGTGATACAAA 59.530 36.000 0.00 0.00 0.00 2.83
6268 7823 4.506288 CGATGCAGACCAAAATACGTGATA 59.494 41.667 0.00 0.00 0.00 2.15
6269 7824 3.309682 CGATGCAGACCAAAATACGTGAT 59.690 43.478 0.00 0.00 0.00 3.06
6270 7825 2.670905 CGATGCAGACCAAAATACGTGA 59.329 45.455 0.00 0.00 0.00 4.35
6271 7826 2.787723 GCGATGCAGACCAAAATACGTG 60.788 50.000 0.00 0.00 0.00 4.49
6272 7827 1.396996 GCGATGCAGACCAAAATACGT 59.603 47.619 0.00 0.00 0.00 3.57
6274 7829 1.396996 ACGCGATGCAGACCAAAATAC 59.603 47.619 15.93 0.00 0.00 1.89
6275 7830 1.396648 CACGCGATGCAGACCAAAATA 59.603 47.619 15.93 0.00 0.00 1.40
6276 7831 0.168788 CACGCGATGCAGACCAAAAT 59.831 50.000 15.93 0.00 0.00 1.82
6277 7832 0.882484 TCACGCGATGCAGACCAAAA 60.882 50.000 15.93 0.00 0.00 2.44
6278 7833 0.673333 ATCACGCGATGCAGACCAAA 60.673 50.000 15.93 0.00 0.00 3.28
6283 7838 2.034558 TGATCTTATCACGCGATGCAGA 59.965 45.455 15.93 7.70 33.59 4.26
6284 7839 2.397549 TGATCTTATCACGCGATGCAG 58.602 47.619 15.93 1.53 33.59 4.41
6285 7840 2.507339 TGATCTTATCACGCGATGCA 57.493 45.000 15.93 0.00 33.59 3.96
6286 7841 3.052745 TCTTGATCTTATCACGCGATGC 58.947 45.455 15.93 0.00 39.39 3.91
6287 7842 4.294232 ACTCTTGATCTTATCACGCGATG 58.706 43.478 15.93 7.85 39.39 3.84
6288 7843 4.576216 ACTCTTGATCTTATCACGCGAT 57.424 40.909 15.93 0.00 39.39 4.58
6290 7845 4.849883 ACTACTCTTGATCTTATCACGCG 58.150 43.478 3.53 3.53 39.39 6.01
6291 7846 6.853872 CACTACTACTCTTGATCTTATCACGC 59.146 42.308 0.00 0.00 39.39 5.34
6292 7847 8.144155 TCACTACTACTCTTGATCTTATCACG 57.856 38.462 0.00 0.00 39.39 4.35
6297 7852 9.587772 GCAATTTCACTACTACTCTTGATCTTA 57.412 33.333 0.00 0.00 0.00 2.10
6299 7854 7.615403 TGCAATTTCACTACTACTCTTGATCT 58.385 34.615 0.00 0.00 0.00 2.75
6301 7856 7.661437 TGTTGCAATTTCACTACTACTCTTGAT 59.339 33.333 0.59 0.00 0.00 2.57
6302 7857 6.989759 TGTTGCAATTTCACTACTACTCTTGA 59.010 34.615 0.59 0.00 0.00 3.02
6303 7858 7.189693 TGTTGCAATTTCACTACTACTCTTG 57.810 36.000 0.59 0.00 0.00 3.02
6304 7859 7.801716 TTGTTGCAATTTCACTACTACTCTT 57.198 32.000 0.59 0.00 0.00 2.85
6305 7860 7.801716 TTTGTTGCAATTTCACTACTACTCT 57.198 32.000 0.59 0.00 0.00 3.24
6306 7861 8.905702 CAATTTGTTGCAATTTCACTACTACTC 58.094 33.333 0.59 0.00 0.00 2.59
6307 7862 8.413229 ACAATTTGTTGCAATTTCACTACTACT 58.587 29.630 0.59 0.00 0.00 2.57
6310 7865 9.410556 GATACAATTTGTTGCAATTTCACTACT 57.589 29.630 7.45 0.00 0.00 2.57
6313 7868 8.550376 GTTGATACAATTTGTTGCAATTTCACT 58.450 29.630 7.45 0.00 29.56 3.41
6315 7870 8.429493 TGTTGATACAATTTGTTGCAATTTCA 57.571 26.923 7.45 0.00 29.56 2.69
6316 7871 8.763356 TCTGTTGATACAATTTGTTGCAATTTC 58.237 29.630 7.45 0.00 32.92 2.17
6318 7873 8.659925 TTCTGTTGATACAATTTGTTGCAATT 57.340 26.923 7.45 0.00 32.92 2.32
6323 7878 9.912634 ATAACCTTCTGTTGATACAATTTGTTG 57.087 29.630 7.45 0.00 37.83 3.33
6333 7888 8.956426 CCAAGCTTTAATAACCTTCTGTTGATA 58.044 33.333 0.00 0.00 37.83 2.15
6334 7889 7.577616 GCCAAGCTTTAATAACCTTCTGTTGAT 60.578 37.037 0.00 0.00 37.83 2.57
6335 7890 6.294508 GCCAAGCTTTAATAACCTTCTGTTGA 60.295 38.462 0.00 0.00 37.83 3.18
6336 7891 5.863935 GCCAAGCTTTAATAACCTTCTGTTG 59.136 40.000 0.00 0.00 37.83 3.33
6338 7893 5.076873 TGCCAAGCTTTAATAACCTTCTGT 58.923 37.500 0.00 0.00 0.00 3.41
6339 7894 5.643379 TGCCAAGCTTTAATAACCTTCTG 57.357 39.130 0.00 0.00 0.00 3.02
6340 7895 5.951747 TCATGCCAAGCTTTAATAACCTTCT 59.048 36.000 0.00 0.00 0.00 2.85
6343 7898 5.016173 TGTCATGCCAAGCTTTAATAACCT 58.984 37.500 0.00 0.00 0.00 3.50
6345 7900 8.925161 TTAATGTCATGCCAAGCTTTAATAAC 57.075 30.769 0.00 0.00 0.00 1.89
6346 7901 8.748412 ACTTAATGTCATGCCAAGCTTTAATAA 58.252 29.630 0.00 0.00 0.00 1.40
6347 7902 8.292444 ACTTAATGTCATGCCAAGCTTTAATA 57.708 30.769 0.00 0.00 0.00 0.98
6348 7903 7.174107 ACTTAATGTCATGCCAAGCTTTAAT 57.826 32.000 0.00 0.00 0.00 1.40
6349 7904 6.588719 ACTTAATGTCATGCCAAGCTTTAA 57.411 33.333 0.00 0.00 0.00 1.52
6351 7906 5.232463 CAACTTAATGTCATGCCAAGCTTT 58.768 37.500 0.00 0.00 0.00 3.51
6352 7907 4.322198 CCAACTTAATGTCATGCCAAGCTT 60.322 41.667 0.00 0.00 0.00 3.74
6353 7908 3.194116 CCAACTTAATGTCATGCCAAGCT 59.806 43.478 0.00 0.00 0.00 3.74
6354 7909 3.193267 TCCAACTTAATGTCATGCCAAGC 59.807 43.478 0.00 0.00 0.00 4.01
6355 7910 5.587388 ATCCAACTTAATGTCATGCCAAG 57.413 39.130 0.00 0.00 0.00 3.61
6356 7911 5.999205 AATCCAACTTAATGTCATGCCAA 57.001 34.783 0.00 0.00 0.00 4.52
6357 7912 5.999205 AAATCCAACTTAATGTCATGCCA 57.001 34.783 0.00 0.00 0.00 4.92
6360 7915 8.279970 TCAGGTAAATCCAACTTAATGTCATG 57.720 34.615 0.00 0.00 39.02 3.07
6361 7916 9.479549 AATCAGGTAAATCCAACTTAATGTCAT 57.520 29.630 0.00 0.00 39.02 3.06
6362 7917 8.877864 AATCAGGTAAATCCAACTTAATGTCA 57.122 30.769 0.00 0.00 39.02 3.58
6363 7918 9.178758 AGAATCAGGTAAATCCAACTTAATGTC 57.821 33.333 0.00 0.00 39.02 3.06
6364 7919 9.533831 AAGAATCAGGTAAATCCAACTTAATGT 57.466 29.630 0.00 0.00 39.02 2.71
6367 7922 9.362151 ACAAAGAATCAGGTAAATCCAACTTAA 57.638 29.630 0.00 0.00 39.02 1.85
6369 7924 7.287696 ACACAAAGAATCAGGTAAATCCAACTT 59.712 33.333 0.00 0.00 39.02 2.66
6370 7925 6.777580 ACACAAAGAATCAGGTAAATCCAACT 59.222 34.615 0.00 0.00 39.02 3.16
6371 7926 6.981722 ACACAAAGAATCAGGTAAATCCAAC 58.018 36.000 0.00 0.00 39.02 3.77
6373 7928 7.004086 AGAACACAAAGAATCAGGTAAATCCA 58.996 34.615 0.00 0.00 39.02 3.41
6374 7929 7.308435 CAGAACACAAAGAATCAGGTAAATCC 58.692 38.462 0.00 0.00 0.00 3.01
6375 7930 7.308435 CCAGAACACAAAGAATCAGGTAAATC 58.692 38.462 0.00 0.00 0.00 2.17
6376 7931 6.294731 GCCAGAACACAAAGAATCAGGTAAAT 60.295 38.462 0.00 0.00 0.00 1.40
6377 7932 5.009610 GCCAGAACACAAAGAATCAGGTAAA 59.990 40.000 0.00 0.00 0.00 2.01
6378 7933 4.518970 GCCAGAACACAAAGAATCAGGTAA 59.481 41.667 0.00 0.00 0.00 2.85
6380 7935 2.887152 GCCAGAACACAAAGAATCAGGT 59.113 45.455 0.00 0.00 0.00 4.00
6381 7936 3.152341 AGCCAGAACACAAAGAATCAGG 58.848 45.455 0.00 0.00 0.00 3.86
6383 7938 4.072131 GGTAGCCAGAACACAAAGAATCA 58.928 43.478 0.00 0.00 0.00 2.57
6384 7939 4.154918 CAGGTAGCCAGAACACAAAGAATC 59.845 45.833 0.00 0.00 0.00 2.52
6385 7940 4.074970 CAGGTAGCCAGAACACAAAGAAT 58.925 43.478 0.00 0.00 0.00 2.40
6387 7942 2.224523 CCAGGTAGCCAGAACACAAAGA 60.225 50.000 0.00 0.00 0.00 2.52
6388 7943 2.154462 CCAGGTAGCCAGAACACAAAG 58.846 52.381 0.00 0.00 0.00 2.77
6389 7944 1.771854 TCCAGGTAGCCAGAACACAAA 59.228 47.619 0.00 0.00 0.00 2.83
6390 7945 1.071699 GTCCAGGTAGCCAGAACACAA 59.928 52.381 0.00 0.00 0.00 3.33
6391 7946 0.685097 GTCCAGGTAGCCAGAACACA 59.315 55.000 0.00 0.00 0.00 3.72
6392 7947 0.036294 GGTCCAGGTAGCCAGAACAC 60.036 60.000 0.00 0.00 0.00 3.32
6393 7948 0.178903 AGGTCCAGGTAGCCAGAACA 60.179 55.000 0.00 0.00 0.00 3.18
6394 7949 0.250513 CAGGTCCAGGTAGCCAGAAC 59.749 60.000 0.00 0.00 0.00 3.01
6395 7950 0.909610 CCAGGTCCAGGTAGCCAGAA 60.910 60.000 0.00 0.00 0.00 3.02
6396 7951 1.306141 CCAGGTCCAGGTAGCCAGA 60.306 63.158 0.00 0.00 0.00 3.86
6398 7953 1.306141 CTCCAGGTCCAGGTAGCCA 60.306 63.158 0.00 0.00 0.00 4.75
6399 7954 2.736826 GCTCCAGGTCCAGGTAGCC 61.737 68.421 11.39 0.00 0.00 3.93
6401 7956 1.617947 GGTGCTCCAGGTCCAGGTAG 61.618 65.000 0.00 0.00 0.00 3.18
6403 7958 2.930562 GGTGCTCCAGGTCCAGGT 60.931 66.667 0.00 0.00 0.00 4.00
6404 7959 4.087892 CGGTGCTCCAGGTCCAGG 62.088 72.222 5.52 0.00 0.00 4.45
6405 7960 3.302347 GACGGTGCTCCAGGTCCAG 62.302 68.421 5.52 0.00 0.00 3.86
6406 7961 3.311110 GACGGTGCTCCAGGTCCA 61.311 66.667 5.52 0.00 0.00 4.02
6407 7962 3.311110 TGACGGTGCTCCAGGTCC 61.311 66.667 5.52 0.00 0.00 4.46
6408 7963 2.048127 GTGACGGTGCTCCAGGTC 60.048 66.667 5.52 5.82 0.00 3.85
6409 7964 3.626924 GGTGACGGTGCTCCAGGT 61.627 66.667 5.52 0.00 0.00 4.00
6410 7965 4.394712 GGGTGACGGTGCTCCAGG 62.395 72.222 5.52 0.00 0.00 4.45
6411 7966 2.859273 GATGGGTGACGGTGCTCCAG 62.859 65.000 5.52 0.57 0.00 3.86
6412 7967 2.927856 ATGGGTGACGGTGCTCCA 60.928 61.111 5.52 0.00 0.00 3.86
6413 7968 2.125106 GATGGGTGACGGTGCTCC 60.125 66.667 0.00 0.00 0.00 4.70
6414 7969 1.448540 CAGATGGGTGACGGTGCTC 60.449 63.158 0.00 0.00 0.00 4.26
6415 7970 1.913262 TCAGATGGGTGACGGTGCT 60.913 57.895 0.00 0.00 0.00 4.40
6416 7971 1.741770 GTCAGATGGGTGACGGTGC 60.742 63.158 0.00 0.00 37.69 5.01
6417 7972 4.598257 GTCAGATGGGTGACGGTG 57.402 61.111 0.00 0.00 37.69 4.94
6422 7977 4.711399 GATGATTCATGTCAGATGGGTGA 58.289 43.478 3.32 0.00 0.00 4.02
6424 7979 3.495629 CCGATGATTCATGTCAGATGGGT 60.496 47.826 3.32 0.00 0.00 4.51
6426 7981 3.072211 CCCGATGATTCATGTCAGATGG 58.928 50.000 3.32 0.00 0.00 3.51
6429 8069 2.224137 GCTCCCGATGATTCATGTCAGA 60.224 50.000 3.32 0.00 0.00 3.27
6434 8074 1.347050 AGGAGCTCCCGATGATTCATG 59.653 52.381 29.54 0.00 40.87 3.07
6507 8157 2.048127 GTGTGCGAGGAGGTGGTC 60.048 66.667 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.