Multiple sequence alignment - TraesCS3D01G177700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G177700 chr3D 100.000 2986 0 0 1 2986 159430723 159433708 0.000000e+00 5515.0
1 TraesCS3D01G177700 chr3D 100.000 1734 0 0 3188 4921 159433910 159435643 0.000000e+00 3203.0
2 TraesCS3D01G177700 chr3D 94.651 430 21 2 2 431 159429750 159429323 0.000000e+00 665.0
3 TraesCS3D01G177700 chr3D 97.778 45 1 0 4038 4082 159434718 159434762 1.470000e-10 78.7
4 TraesCS3D01G177700 chr3D 97.778 45 1 0 3996 4040 159434760 159434804 1.470000e-10 78.7
5 TraesCS3D01G177700 chr3A 91.389 1858 114 23 992 2814 168836207 168834361 0.000000e+00 2503.0
6 TraesCS3D01G177700 chr3A 93.207 898 41 9 4038 4921 168833226 168832335 0.000000e+00 1303.0
7 TraesCS3D01G177700 chr3A 86.223 871 82 27 3188 4043 168834026 168833179 0.000000e+00 909.0
8 TraesCS3D01G177700 chr3A 85.000 440 40 7 552 967 168836635 168836198 1.640000e-114 424.0
9 TraesCS3D01G177700 chr3A 94.340 106 5 1 2811 2916 168834244 168834140 1.420000e-35 161.0
10 TraesCS3D01G177700 chr3B 87.741 2072 172 42 895 2917 236148136 236150174 0.000000e+00 2344.0
11 TraesCS3D01G177700 chr3B 95.928 884 34 2 4038 4921 236151344 236152225 0.000000e+00 1432.0
12 TraesCS3D01G177700 chr3B 85.502 607 60 18 3442 4040 236150802 236151388 4.210000e-170 608.0
13 TraesCS3D01G177700 chr3B 87.692 260 25 4 3188 3443 236150288 236150544 3.720000e-76 296.0
14 TraesCS3D01G177700 chr3B 93.750 128 8 0 430 557 829005894 829006021 5.030000e-45 193.0
15 TraesCS3D01G177700 chr4D 94.700 434 21 2 2 435 364026471 364026902 0.000000e+00 673.0
16 TraesCS3D01G177700 chr4D 93.850 439 23 4 3 438 8713234 8713671 0.000000e+00 658.0
17 TraesCS3D01G177700 chr4D 93.995 433 23 3 2 433 35124285 35124715 0.000000e+00 652.0
18 TraesCS3D01G177700 chr2D 94.253 435 22 3 2 435 321081421 321080989 0.000000e+00 662.0
19 TraesCS3D01G177700 chr2D 94.064 438 20 5 2 435 629577142 629577577 0.000000e+00 660.0
20 TraesCS3D01G177700 chr2D 92.143 140 11 0 428 567 518803429 518803568 1.080000e-46 198.0
21 TraesCS3D01G177700 chr2D 90.141 142 14 0 430 571 552575199 552575340 8.410000e-43 185.0
22 TraesCS3D01G177700 chr1D 95.000 420 19 2 2 420 463250330 463249912 0.000000e+00 658.0
23 TraesCS3D01G177700 chr1D 93.130 131 8 1 428 558 475914536 475914407 1.810000e-44 191.0
24 TraesCS3D01G177700 chr1D 92.683 41 3 0 2610 2650 257356351 257356391 5.320000e-05 60.2
25 TraesCS3D01G177700 chrUn 93.968 431 24 2 2 432 45207859 45207431 0.000000e+00 651.0
26 TraesCS3D01G177700 chrUn 91.241 137 11 1 428 564 45208302 45208437 8.410000e-43 185.0
27 TraesCS3D01G177700 chr7D 93.968 431 22 3 2 430 568365571 568365999 0.000000e+00 649.0
28 TraesCS3D01G177700 chr6D 92.593 135 10 0 428 562 460655942 460655808 1.400000e-45 195.0
29 TraesCS3D01G177700 chr5A 93.182 132 9 0 428 559 670269752 670269883 1.400000e-45 195.0
30 TraesCS3D01G177700 chr4A 93.023 129 9 0 430 558 725516778 725516906 6.500000e-44 189.0
31 TraesCS3D01G177700 chr7B 90.141 142 12 2 427 566 427288288 427288429 3.030000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G177700 chr3D 159430723 159435643 4920 False 2218.85 5515 98.88900 1 4921 4 chr3D.!!$F1 4920
1 TraesCS3D01G177700 chr3A 168832335 168836635 4300 True 1060.00 2503 90.03180 552 4921 5 chr3A.!!$R1 4369
2 TraesCS3D01G177700 chr3B 236148136 236152225 4089 False 1170.00 2344 89.21575 895 4921 4 chr3B.!!$F2 4026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
142 143 0.034186 CCAGCTTTGGATGTGGGCTA 60.034 55.0 0.00 0.00 0.00 3.93 F
428 429 0.038892 GTGGGCGTTAGTGTTCTCGA 60.039 55.0 0.00 0.00 0.00 4.04 F
523 524 0.251341 AAATGTGTGGGCAGACTCCC 60.251 55.0 3.67 3.67 46.73 4.30 F
525 526 0.252696 ATGTGTGGGCAGACTCCCTA 60.253 55.0 10.28 0.00 46.67 3.53 F
536 537 0.462047 GACTCCCTAATGCCCACACG 60.462 60.0 0.00 0.00 0.00 4.49 F
2447 2539 0.111061 TTGCTGCCTGACAATGGACT 59.889 50.0 0.00 0.00 0.00 3.85 F
3333 3594 0.106519 AACTGAACTGCTTGTGGCCT 60.107 50.0 3.32 0.00 40.92 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1733 1815 1.004440 AACCCAAGCTGACTCGCTC 60.004 57.895 0.00 0.00 39.86 5.03 R
2391 2483 0.966179 AACCGAATTGCCTCCAAACC 59.034 50.000 0.00 0.00 34.05 3.27 R
2408 2500 4.043200 GGCGGACCTGCTTGCAAC 62.043 66.667 0.00 0.00 34.52 4.17 R
2448 2540 6.382859 TCTCAGGCACTTTAATATGTAGTCCA 59.617 38.462 0.00 0.00 34.60 4.02 R
2532 2626 6.177610 AGAATCAAAATGCATTGCTTTGGAT 58.822 32.000 13.82 15.56 32.17 3.41 R
3557 4080 0.029167 TCACACGCACAAGCACAATG 59.971 50.000 0.00 0.00 42.27 2.82 R
4473 5004 2.020131 CTGCAAGCCATCATCCGTC 58.980 57.895 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.839629 TGCTACGACAGTTGCCATG 58.160 52.632 0.00 0.00 46.05 3.66
19 20 0.034756 TGCTACGACAGTTGCCATGT 59.965 50.000 0.00 0.00 46.05 3.21
20 21 1.273886 TGCTACGACAGTTGCCATGTA 59.726 47.619 0.00 0.00 46.05 2.29
21 22 1.659098 GCTACGACAGTTGCCATGTAC 59.341 52.381 0.00 0.00 41.98 2.90
22 23 2.268298 CTACGACAGTTGCCATGTACC 58.732 52.381 0.00 0.00 0.00 3.34
23 24 0.394938 ACGACAGTTGCCATGTACCA 59.605 50.000 0.00 0.00 0.00 3.25
24 25 1.003118 ACGACAGTTGCCATGTACCAT 59.997 47.619 0.00 0.00 0.00 3.55
25 26 1.398041 CGACAGTTGCCATGTACCATG 59.602 52.381 0.00 0.00 0.00 3.66
26 27 1.133025 GACAGTTGCCATGTACCATGC 59.867 52.381 0.00 0.00 0.00 4.06
27 28 1.175654 CAGTTGCCATGTACCATGCA 58.824 50.000 0.00 0.00 0.00 3.96
28 29 1.545136 CAGTTGCCATGTACCATGCAA 59.455 47.619 8.43 8.43 41.08 4.08
29 30 2.029200 CAGTTGCCATGTACCATGCAAA 60.029 45.455 12.71 2.42 44.44 3.68
30 31 2.632028 AGTTGCCATGTACCATGCAAAA 59.368 40.909 12.71 0.57 44.44 2.44
31 32 3.070734 AGTTGCCATGTACCATGCAAAAA 59.929 39.130 12.71 0.00 44.44 1.94
32 33 3.037431 TGCCATGTACCATGCAAAAAC 57.963 42.857 0.00 0.00 0.00 2.43
33 34 2.366590 TGCCATGTACCATGCAAAAACA 59.633 40.909 0.00 0.00 0.00 2.83
34 35 2.736192 GCCATGTACCATGCAAAAACAC 59.264 45.455 0.00 0.00 0.00 3.32
35 36 3.801638 GCCATGTACCATGCAAAAACACA 60.802 43.478 0.00 0.00 0.00 3.72
36 37 4.567971 CCATGTACCATGCAAAAACACAT 58.432 39.130 0.00 0.00 0.00 3.21
37 38 4.389382 CCATGTACCATGCAAAAACACATG 59.611 41.667 17.84 17.84 42.67 3.21
43 44 4.491234 CATGCAAAAACACATGGCAATT 57.509 36.364 0.00 0.00 39.98 2.32
44 45 4.468643 CATGCAAAAACACATGGCAATTC 58.531 39.130 0.00 0.00 39.98 2.17
45 46 2.543012 TGCAAAAACACATGGCAATTCG 59.457 40.909 0.00 0.00 0.00 3.34
46 47 2.096318 GCAAAAACACATGGCAATTCGG 60.096 45.455 0.00 0.00 0.00 4.30
47 48 2.453983 AAAACACATGGCAATTCGGG 57.546 45.000 0.00 0.00 0.00 5.14
48 49 1.337118 AAACACATGGCAATTCGGGT 58.663 45.000 0.00 0.00 0.00 5.28
49 50 2.208132 AACACATGGCAATTCGGGTA 57.792 45.000 0.00 0.00 0.00 3.69
50 51 2.208132 ACACATGGCAATTCGGGTAA 57.792 45.000 0.00 0.00 0.00 2.85
51 52 2.520069 ACACATGGCAATTCGGGTAAA 58.480 42.857 0.00 0.00 0.00 2.01
52 53 2.894126 ACACATGGCAATTCGGGTAAAA 59.106 40.909 0.00 0.00 0.00 1.52
53 54 3.056891 ACACATGGCAATTCGGGTAAAAG 60.057 43.478 0.00 0.00 0.00 2.27
54 55 3.192422 CACATGGCAATTCGGGTAAAAGA 59.808 43.478 0.00 0.00 0.00 2.52
55 56 3.443681 ACATGGCAATTCGGGTAAAAGAG 59.556 43.478 0.00 0.00 0.00 2.85
56 57 3.426787 TGGCAATTCGGGTAAAAGAGA 57.573 42.857 0.00 0.00 0.00 3.10
57 58 3.343617 TGGCAATTCGGGTAAAAGAGAG 58.656 45.455 0.00 0.00 0.00 3.20
58 59 3.244770 TGGCAATTCGGGTAAAAGAGAGT 60.245 43.478 0.00 0.00 0.00 3.24
59 60 3.756963 GGCAATTCGGGTAAAAGAGAGTT 59.243 43.478 0.00 0.00 0.00 3.01
60 61 4.379499 GGCAATTCGGGTAAAAGAGAGTTG 60.379 45.833 0.00 0.00 34.73 3.16
61 62 4.723248 CAATTCGGGTAAAAGAGAGTTGC 58.277 43.478 0.00 0.00 0.00 4.17
62 63 2.467566 TCGGGTAAAAGAGAGTTGCC 57.532 50.000 0.00 0.00 0.00 4.52
63 64 1.695242 TCGGGTAAAAGAGAGTTGCCA 59.305 47.619 0.00 0.00 32.79 4.92
64 65 2.304761 TCGGGTAAAAGAGAGTTGCCAT 59.695 45.455 0.00 0.00 32.79 4.40
65 66 2.678336 CGGGTAAAAGAGAGTTGCCATC 59.322 50.000 0.00 0.00 32.79 3.51
66 67 3.619979 CGGGTAAAAGAGAGTTGCCATCT 60.620 47.826 0.00 0.00 32.79 2.90
67 68 3.691609 GGGTAAAAGAGAGTTGCCATCTG 59.308 47.826 0.00 0.00 32.79 2.90
68 69 3.127721 GGTAAAAGAGAGTTGCCATCTGC 59.872 47.826 0.00 0.00 41.77 4.26
69 70 2.875094 AAAGAGAGTTGCCATCTGCT 57.125 45.000 0.00 0.00 42.00 4.24
70 71 2.875094 AAGAGAGTTGCCATCTGCTT 57.125 45.000 0.00 0.00 42.00 3.91
71 72 3.988976 AAGAGAGTTGCCATCTGCTTA 57.011 42.857 0.00 0.00 42.00 3.09
72 73 3.258971 AGAGAGTTGCCATCTGCTTAC 57.741 47.619 0.00 0.00 42.00 2.34
73 74 2.568956 AGAGAGTTGCCATCTGCTTACA 59.431 45.455 0.00 0.00 42.00 2.41
74 75 3.008375 AGAGAGTTGCCATCTGCTTACAA 59.992 43.478 0.00 0.00 42.00 2.41
75 76 3.341823 AGAGTTGCCATCTGCTTACAAG 58.658 45.455 0.00 0.00 42.00 3.16
88 89 2.436417 CTTACAAGCAAAGCTAGGGCA 58.564 47.619 6.90 0.00 38.25 5.36
89 90 2.113860 TACAAGCAAAGCTAGGGCAG 57.886 50.000 6.90 2.19 38.25 4.85
90 91 0.111253 ACAAGCAAAGCTAGGGCAGT 59.889 50.000 6.90 2.72 38.25 4.40
91 92 1.251251 CAAGCAAAGCTAGGGCAGTT 58.749 50.000 6.90 0.00 38.25 3.16
92 93 1.068055 CAAGCAAAGCTAGGGCAGTTG 60.068 52.381 6.90 0.00 38.25 3.16
93 94 1.213799 GCAAAGCTAGGGCAGTTGC 59.786 57.895 11.47 11.47 46.39 4.17
104 105 1.508088 GCAGTTGCCATGTACCTGC 59.492 57.895 7.76 7.76 34.31 4.85
105 106 1.243342 GCAGTTGCCATGTACCTGCA 61.243 55.000 15.05 5.30 36.49 4.41
106 107 0.806868 CAGTTGCCATGTACCTGCAG 59.193 55.000 6.78 6.78 36.21 4.41
107 108 0.692476 AGTTGCCATGTACCTGCAGA 59.308 50.000 17.39 0.00 36.21 4.26
108 109 1.073763 AGTTGCCATGTACCTGCAGAA 59.926 47.619 17.39 0.00 36.21 3.02
109 110 1.885887 GTTGCCATGTACCTGCAGAAA 59.114 47.619 17.39 0.00 36.21 2.52
110 111 1.533625 TGCCATGTACCTGCAGAAAC 58.466 50.000 17.39 13.19 0.00 2.78
111 112 1.202867 TGCCATGTACCTGCAGAAACA 60.203 47.619 17.39 18.56 0.00 2.83
112 113 1.200020 GCCATGTACCTGCAGAAACAC 59.800 52.381 17.39 7.60 0.00 3.32
113 114 2.503331 CCATGTACCTGCAGAAACACA 58.497 47.619 17.39 13.12 0.00 3.72
114 115 3.084039 CCATGTACCTGCAGAAACACAT 58.916 45.455 17.39 14.76 0.00 3.21
115 116 3.119743 CCATGTACCTGCAGAAACACATG 60.120 47.826 26.25 26.25 41.71 3.21
116 117 2.503331 TGTACCTGCAGAAACACATGG 58.497 47.619 17.39 0.00 0.00 3.66
117 118 1.200020 GTACCTGCAGAAACACATGGC 59.800 52.381 17.39 0.00 0.00 4.40
118 119 0.467844 ACCTGCAGAAACACATGGCA 60.468 50.000 17.39 0.00 0.00 4.92
119 120 0.675083 CCTGCAGAAACACATGGCAA 59.325 50.000 17.39 0.00 33.58 4.52
120 121 1.603678 CCTGCAGAAACACATGGCAAC 60.604 52.381 17.39 0.00 33.58 4.17
121 122 1.338973 CTGCAGAAACACATGGCAACT 59.661 47.619 8.42 0.00 33.58 3.16
122 123 1.067364 TGCAGAAACACATGGCAACTG 59.933 47.619 0.00 1.50 37.61 3.16
123 124 1.774639 CAGAAACACATGGCAACTGC 58.225 50.000 0.00 0.00 41.14 4.40
133 134 3.447040 GCAACTGCCAGCTTTGGA 58.553 55.556 0.00 0.00 34.31 3.53
134 135 1.969862 GCAACTGCCAGCTTTGGAT 59.030 52.632 0.00 0.00 34.31 3.41
135 136 0.389426 GCAACTGCCAGCTTTGGATG 60.389 55.000 0.00 0.00 34.31 3.51
136 137 0.963962 CAACTGCCAGCTTTGGATGT 59.036 50.000 0.00 0.00 0.00 3.06
137 138 0.963962 AACTGCCAGCTTTGGATGTG 59.036 50.000 0.00 0.00 0.00 3.21
138 139 0.896940 ACTGCCAGCTTTGGATGTGG 60.897 55.000 0.00 0.00 0.00 4.17
139 140 1.601419 CTGCCAGCTTTGGATGTGGG 61.601 60.000 0.00 0.00 0.00 4.61
140 141 3.010413 GCCAGCTTTGGATGTGGGC 62.010 63.158 0.00 0.00 0.00 5.36
141 142 1.304713 CCAGCTTTGGATGTGGGCT 60.305 57.895 0.00 0.00 0.00 5.19
142 143 0.034186 CCAGCTTTGGATGTGGGCTA 60.034 55.000 0.00 0.00 0.00 3.93
143 144 1.410648 CCAGCTTTGGATGTGGGCTAT 60.411 52.381 0.00 0.00 0.00 2.97
144 145 1.679680 CAGCTTTGGATGTGGGCTATG 59.320 52.381 0.00 0.00 0.00 2.23
145 146 1.565759 AGCTTTGGATGTGGGCTATGA 59.434 47.619 0.00 0.00 0.00 2.15
146 147 1.952296 GCTTTGGATGTGGGCTATGAG 59.048 52.381 0.00 0.00 0.00 2.90
147 148 2.421952 GCTTTGGATGTGGGCTATGAGA 60.422 50.000 0.00 0.00 0.00 3.27
148 149 3.749954 GCTTTGGATGTGGGCTATGAGAT 60.750 47.826 0.00 0.00 0.00 2.75
149 150 3.497103 TTGGATGTGGGCTATGAGATG 57.503 47.619 0.00 0.00 0.00 2.90
150 151 1.701292 TGGATGTGGGCTATGAGATGG 59.299 52.381 0.00 0.00 0.00 3.51
151 152 1.004044 GGATGTGGGCTATGAGATGGG 59.996 57.143 0.00 0.00 0.00 4.00
152 153 0.403271 ATGTGGGCTATGAGATGGGC 59.597 55.000 0.00 0.00 35.52 5.36
153 154 1.302033 GTGGGCTATGAGATGGGCG 60.302 63.158 0.00 0.00 37.18 6.13
154 155 1.766059 TGGGCTATGAGATGGGCGT 60.766 57.895 0.00 0.00 37.18 5.68
155 156 1.302033 GGGCTATGAGATGGGCGTG 60.302 63.158 0.00 0.00 37.18 5.34
156 157 1.447643 GGCTATGAGATGGGCGTGT 59.552 57.895 0.00 0.00 0.00 4.49
157 158 0.882042 GGCTATGAGATGGGCGTGTG 60.882 60.000 0.00 0.00 0.00 3.82
158 159 0.882042 GCTATGAGATGGGCGTGTGG 60.882 60.000 0.00 0.00 0.00 4.17
159 160 0.250038 CTATGAGATGGGCGTGTGGG 60.250 60.000 0.00 0.00 0.00 4.61
160 161 2.324014 TATGAGATGGGCGTGTGGGC 62.324 60.000 0.00 0.00 41.35 5.36
167 168 4.980805 GGCGTGTGGGCGAAGTGA 62.981 66.667 0.00 0.00 0.00 3.41
168 169 2.742372 GCGTGTGGGCGAAGTGAT 60.742 61.111 0.00 0.00 0.00 3.06
169 170 1.447140 GCGTGTGGGCGAAGTGATA 60.447 57.895 0.00 0.00 0.00 2.15
170 171 1.017177 GCGTGTGGGCGAAGTGATAA 61.017 55.000 0.00 0.00 0.00 1.75
171 172 1.434555 CGTGTGGGCGAAGTGATAAA 58.565 50.000 0.00 0.00 0.00 1.40
172 173 1.127951 CGTGTGGGCGAAGTGATAAAC 59.872 52.381 0.00 0.00 0.00 2.01
173 174 1.127951 GTGTGGGCGAAGTGATAAACG 59.872 52.381 0.00 0.00 0.00 3.60
177 178 2.462503 GCGAAGTGATAAACGCCCA 58.537 52.632 0.00 0.00 44.27 5.36
178 179 0.096454 GCGAAGTGATAAACGCCCAC 59.904 55.000 0.00 0.00 44.27 4.61
179 180 1.434555 CGAAGTGATAAACGCCCACA 58.565 50.000 0.00 0.00 33.53 4.17
180 181 1.127951 CGAAGTGATAAACGCCCACAC 59.872 52.381 0.00 0.00 33.53 3.82
181 182 2.147958 GAAGTGATAAACGCCCACACA 58.852 47.619 0.00 0.00 34.47 3.72
182 183 1.519408 AGTGATAAACGCCCACACAC 58.481 50.000 0.00 0.00 34.47 3.82
183 184 0.519961 GTGATAAACGCCCACACACC 59.480 55.000 0.00 0.00 0.00 4.16
184 185 0.108774 TGATAAACGCCCACACACCA 59.891 50.000 0.00 0.00 0.00 4.17
185 186 0.802494 GATAAACGCCCACACACCAG 59.198 55.000 0.00 0.00 0.00 4.00
186 187 1.241315 ATAAACGCCCACACACCAGC 61.241 55.000 0.00 0.00 0.00 4.85
192 193 4.351054 CCACACACCAGCCCCCTC 62.351 72.222 0.00 0.00 0.00 4.30
193 194 3.252284 CACACACCAGCCCCCTCT 61.252 66.667 0.00 0.00 0.00 3.69
194 195 3.252284 ACACACCAGCCCCCTCTG 61.252 66.667 0.00 0.00 0.00 3.35
195 196 4.729918 CACACCAGCCCCCTCTGC 62.730 72.222 0.00 0.00 32.87 4.26
204 205 4.680237 CCCCTCTGCGTGCGTGAA 62.680 66.667 0.00 0.00 0.00 3.18
205 206 2.664851 CCCTCTGCGTGCGTGAAA 60.665 61.111 0.00 0.00 0.00 2.69
206 207 2.551270 CCTCTGCGTGCGTGAAAC 59.449 61.111 0.00 0.00 0.00 2.78
207 208 2.551270 CTCTGCGTGCGTGAAACC 59.449 61.111 0.00 0.00 0.00 3.27
208 209 2.954753 CTCTGCGTGCGTGAAACCC 61.955 63.158 0.00 0.00 0.00 4.11
209 210 3.276091 CTGCGTGCGTGAAACCCA 61.276 61.111 0.00 0.00 0.00 4.51
210 211 2.593148 TGCGTGCGTGAAACCCAT 60.593 55.556 0.00 0.00 0.00 4.00
211 212 2.126888 GCGTGCGTGAAACCCATG 60.127 61.111 0.00 0.00 34.81 3.66
212 213 2.903547 GCGTGCGTGAAACCCATGT 61.904 57.895 0.00 0.00 34.21 3.21
213 214 1.082169 CGTGCGTGAAACCCATGTG 60.082 57.895 0.00 0.00 34.28 3.21
214 215 1.781025 CGTGCGTGAAACCCATGTGT 61.781 55.000 0.00 0.00 34.28 3.72
215 216 0.317770 GTGCGTGAAACCCATGTGTG 60.318 55.000 0.00 0.00 34.28 3.82
216 217 1.285641 GCGTGAAACCCATGTGTGG 59.714 57.895 0.00 0.00 45.61 4.17
225 226 3.818586 CCATGTGTGGGTGAATTGC 57.181 52.632 0.00 0.00 42.11 3.56
226 227 1.259609 CCATGTGTGGGTGAATTGCT 58.740 50.000 0.00 0.00 42.11 3.91
227 228 2.445427 CCATGTGTGGGTGAATTGCTA 58.555 47.619 0.00 0.00 42.11 3.49
228 229 2.824936 CCATGTGTGGGTGAATTGCTAA 59.175 45.455 0.00 0.00 42.11 3.09
229 230 3.257873 CCATGTGTGGGTGAATTGCTAAA 59.742 43.478 0.00 0.00 42.11 1.85
230 231 4.236935 CATGTGTGGGTGAATTGCTAAAC 58.763 43.478 0.00 0.00 0.00 2.01
231 232 2.292016 TGTGTGGGTGAATTGCTAAACG 59.708 45.455 0.00 0.00 0.00 3.60
232 233 1.268352 TGTGGGTGAATTGCTAAACGC 59.732 47.619 0.00 0.00 39.77 4.84
233 234 0.885196 TGGGTGAATTGCTAAACGCC 59.115 50.000 0.00 0.00 38.05 5.68
234 235 0.172578 GGGTGAATTGCTAAACGCCC 59.827 55.000 9.72 9.72 44.04 6.13
235 236 0.885196 GGTGAATTGCTAAACGCCCA 59.115 50.000 0.00 0.00 38.05 5.36
236 237 1.402325 GGTGAATTGCTAAACGCCCAC 60.402 52.381 0.00 0.00 38.05 4.61
237 238 1.268352 GTGAATTGCTAAACGCCCACA 59.732 47.619 0.00 0.00 38.05 4.17
238 239 1.268352 TGAATTGCTAAACGCCCACAC 59.732 47.619 0.00 0.00 38.05 3.82
239 240 1.268352 GAATTGCTAAACGCCCACACA 59.732 47.619 0.00 0.00 38.05 3.72
240 241 0.596082 ATTGCTAAACGCCCACACAC 59.404 50.000 0.00 0.00 38.05 3.82
241 242 1.448922 TTGCTAAACGCCCACACACC 61.449 55.000 0.00 0.00 38.05 4.16
242 243 1.894756 GCTAAACGCCCACACACCA 60.895 57.895 0.00 0.00 0.00 4.17
243 244 1.852067 GCTAAACGCCCACACACCAG 61.852 60.000 0.00 0.00 0.00 4.00
244 245 1.852067 CTAAACGCCCACACACCAGC 61.852 60.000 0.00 0.00 0.00 4.85
262 263 4.261701 CCCCCGTGTGGTGAAAAA 57.738 55.556 0.00 0.00 0.00 1.94
278 279 4.544001 AAAAAGACGTGTGGGCGA 57.456 50.000 0.00 0.00 35.59 5.54
279 280 2.019337 AAAAAGACGTGTGGGCGAC 58.981 52.632 0.00 0.00 35.59 5.19
280 281 1.768112 AAAAAGACGTGTGGGCGACG 61.768 55.000 0.00 0.00 42.62 5.12
281 282 4.657824 AAGACGTGTGGGCGACGG 62.658 66.667 0.00 0.00 41.21 4.79
286 287 4.077184 GTGTGGGCGACGGGATGA 62.077 66.667 0.00 0.00 0.00 2.92
287 288 3.315140 TGTGGGCGACGGGATGAA 61.315 61.111 0.00 0.00 0.00 2.57
288 289 2.189521 GTGGGCGACGGGATGAAT 59.810 61.111 0.00 0.00 0.00 2.57
289 290 2.180204 GTGGGCGACGGGATGAATG 61.180 63.158 0.00 0.00 0.00 2.67
290 291 3.279875 GGGCGACGGGATGAATGC 61.280 66.667 0.00 0.00 0.00 3.56
291 292 3.279875 GGCGACGGGATGAATGCC 61.280 66.667 0.00 0.00 35.04 4.40
292 293 3.279875 GCGACGGGATGAATGCCC 61.280 66.667 0.00 0.00 42.41 5.36
293 294 2.189257 CGACGGGATGAATGCCCA 59.811 61.111 0.00 0.00 46.36 5.36
294 295 2.180204 CGACGGGATGAATGCCCAC 61.180 63.158 0.00 0.00 46.36 4.61
295 296 1.077787 GACGGGATGAATGCCCACA 60.078 57.895 0.00 0.00 46.36 4.17
296 297 1.376609 GACGGGATGAATGCCCACAC 61.377 60.000 0.00 0.00 46.36 3.82
297 298 1.378382 CGGGATGAATGCCCACACA 60.378 57.895 0.00 0.00 46.36 3.72
298 299 1.656818 CGGGATGAATGCCCACACAC 61.657 60.000 0.00 0.00 46.36 3.82
299 300 1.322538 GGGATGAATGCCCACACACC 61.323 60.000 0.00 0.00 45.31 4.16
300 301 0.611618 GGATGAATGCCCACACACCA 60.612 55.000 0.00 0.00 0.00 4.17
301 302 0.813184 GATGAATGCCCACACACCAG 59.187 55.000 0.00 0.00 0.00 4.00
302 303 1.252904 ATGAATGCCCACACACCAGC 61.253 55.000 0.00 0.00 0.00 4.85
303 304 1.604593 GAATGCCCACACACCAGCT 60.605 57.895 0.00 0.00 0.00 4.24
304 305 1.152483 AATGCCCACACACCAGCTT 60.152 52.632 0.00 0.00 0.00 3.74
305 306 0.112218 AATGCCCACACACCAGCTTA 59.888 50.000 0.00 0.00 0.00 3.09
306 307 0.322816 ATGCCCACACACCAGCTTAG 60.323 55.000 0.00 0.00 0.00 2.18
307 308 1.073199 GCCCACACACCAGCTTAGT 59.927 57.895 0.00 0.00 0.00 2.24
308 309 0.955919 GCCCACACACCAGCTTAGTC 60.956 60.000 0.00 0.00 0.00 2.59
309 310 0.321653 CCCACACACCAGCTTAGTCC 60.322 60.000 0.00 0.00 0.00 3.85
310 311 0.687354 CCACACACCAGCTTAGTCCT 59.313 55.000 0.00 0.00 0.00 3.85
311 312 1.899814 CCACACACCAGCTTAGTCCTA 59.100 52.381 0.00 0.00 0.00 2.94
312 313 2.501723 CCACACACCAGCTTAGTCCTAT 59.498 50.000 0.00 0.00 0.00 2.57
313 314 3.525537 CACACACCAGCTTAGTCCTATG 58.474 50.000 0.00 0.00 0.00 2.23
314 315 3.055819 CACACACCAGCTTAGTCCTATGT 60.056 47.826 0.00 0.00 0.00 2.29
315 316 3.055819 ACACACCAGCTTAGTCCTATGTG 60.056 47.826 0.00 0.00 41.49 3.21
316 317 3.195610 CACACCAGCTTAGTCCTATGTGA 59.804 47.826 0.00 0.00 38.76 3.58
317 318 3.195825 ACACCAGCTTAGTCCTATGTGAC 59.804 47.826 0.00 0.00 35.43 3.67
318 319 3.195610 CACCAGCTTAGTCCTATGTGACA 59.804 47.826 0.00 0.00 37.73 3.58
319 320 3.195825 ACCAGCTTAGTCCTATGTGACAC 59.804 47.826 0.00 0.00 37.73 3.67
320 321 3.195610 CCAGCTTAGTCCTATGTGACACA 59.804 47.826 11.41 11.41 37.73 3.72
321 322 4.177026 CAGCTTAGTCCTATGTGACACAC 58.823 47.826 11.22 1.42 37.73 3.82
333 334 4.614555 TGTGACACACAAAAACTGCTAG 57.385 40.909 3.56 0.00 41.69 3.42
334 335 4.257731 TGTGACACACAAAAACTGCTAGA 58.742 39.130 3.56 0.00 41.69 2.43
335 336 4.697828 TGTGACACACAAAAACTGCTAGAA 59.302 37.500 3.56 0.00 41.69 2.10
336 337 5.028375 GTGACACACAAAAACTGCTAGAAC 58.972 41.667 0.00 0.00 34.08 3.01
337 338 4.201773 TGACACACAAAAACTGCTAGAACG 60.202 41.667 0.00 0.00 0.00 3.95
338 339 3.035942 CACACAAAAACTGCTAGAACGC 58.964 45.455 0.00 0.00 0.00 4.84
339 340 2.286184 ACACAAAAACTGCTAGAACGCG 60.286 45.455 3.53 3.53 0.00 6.01
340 341 1.318251 CAAAAACTGCTAGAACGCGC 58.682 50.000 5.73 0.00 0.00 6.86
341 342 0.237498 AAAAACTGCTAGAACGCGCC 59.763 50.000 5.73 0.00 0.00 6.53
342 343 0.882927 AAAACTGCTAGAACGCGCCA 60.883 50.000 5.73 0.00 0.00 5.69
343 344 0.882927 AAACTGCTAGAACGCGCCAA 60.883 50.000 5.73 0.00 0.00 4.52
344 345 1.291877 AACTGCTAGAACGCGCCAAG 61.292 55.000 5.73 0.00 0.00 3.61
345 346 1.446099 CTGCTAGAACGCGCCAAGA 60.446 57.895 5.73 0.00 0.00 3.02
346 347 0.807667 CTGCTAGAACGCGCCAAGAT 60.808 55.000 5.73 0.00 0.00 2.40
347 348 0.391130 TGCTAGAACGCGCCAAGATT 60.391 50.000 5.73 0.00 0.00 2.40
348 349 0.301987 GCTAGAACGCGCCAAGATTC 59.698 55.000 5.73 0.48 0.00 2.52
349 350 0.572590 CTAGAACGCGCCAAGATTCG 59.427 55.000 5.73 0.00 0.00 3.34
350 351 0.108992 TAGAACGCGCCAAGATTCGT 60.109 50.000 5.73 0.00 36.67 3.85
351 352 1.225745 GAACGCGCCAAGATTCGTG 60.226 57.895 5.73 0.00 41.41 4.35
352 353 3.308878 AACGCGCCAAGATTCGTGC 62.309 57.895 5.73 0.00 39.52 5.34
353 354 3.787676 CGCGCCAAGATTCGTGCA 61.788 61.111 0.00 0.00 35.20 4.57
354 355 2.793946 GCGCCAAGATTCGTGCAT 59.206 55.556 0.00 0.00 35.57 3.96
355 356 1.761244 CGCGCCAAGATTCGTGCATA 61.761 55.000 0.00 0.00 35.20 3.14
356 357 0.376852 GCGCCAAGATTCGTGCATAA 59.623 50.000 0.00 0.00 35.57 1.90
357 358 1.002468 GCGCCAAGATTCGTGCATAAT 60.002 47.619 0.00 0.00 35.57 1.28
358 359 2.541588 GCGCCAAGATTCGTGCATAATT 60.542 45.455 0.00 0.00 35.57 1.40
359 360 3.038017 CGCCAAGATTCGTGCATAATTG 58.962 45.455 0.00 0.00 0.00 2.32
360 361 3.242706 CGCCAAGATTCGTGCATAATTGA 60.243 43.478 0.00 0.00 0.00 2.57
361 362 4.555313 CGCCAAGATTCGTGCATAATTGAT 60.555 41.667 0.00 0.00 0.00 2.57
362 363 5.284079 GCCAAGATTCGTGCATAATTGATT 58.716 37.500 0.00 0.00 0.00 2.57
363 364 5.174398 GCCAAGATTCGTGCATAATTGATTG 59.826 40.000 0.00 1.39 0.00 2.67
364 365 5.688621 CCAAGATTCGTGCATAATTGATTGG 59.311 40.000 15.17 15.17 0.00 3.16
365 366 6.459985 CCAAGATTCGTGCATAATTGATTGGA 60.460 38.462 19.43 0.00 35.44 3.53
366 367 6.064846 AGATTCGTGCATAATTGATTGGAC 57.935 37.500 0.00 0.00 0.00 4.02
370 371 4.214980 GTGCATAATTGATTGGACGAGG 57.785 45.455 0.00 0.00 0.00 4.63
371 372 3.876914 GTGCATAATTGATTGGACGAGGA 59.123 43.478 0.00 0.00 0.00 3.71
372 373 4.516698 GTGCATAATTGATTGGACGAGGAT 59.483 41.667 0.00 0.00 0.00 3.24
373 374 4.756642 TGCATAATTGATTGGACGAGGATC 59.243 41.667 0.00 0.00 0.00 3.36
374 375 4.154918 GCATAATTGATTGGACGAGGATCC 59.845 45.833 2.48 2.48 39.45 3.36
379 380 2.814604 TGGACGAGGATCCATGCG 59.185 61.111 15.82 16.44 44.14 4.73
380 381 2.058001 TGGACGAGGATCCATGCGT 61.058 57.895 22.01 22.01 44.14 5.24
381 382 1.592669 GGACGAGGATCCATGCGTG 60.593 63.158 25.36 0.00 38.77 5.34
382 383 1.141881 GACGAGGATCCATGCGTGT 59.858 57.895 25.36 10.28 37.07 4.49
383 384 1.148157 GACGAGGATCCATGCGTGTG 61.148 60.000 25.36 5.34 37.07 3.82
384 385 1.884464 CGAGGATCCATGCGTGTGG 60.884 63.158 15.82 0.40 40.76 4.17
385 386 1.524621 GAGGATCCATGCGTGTGGG 60.525 63.158 15.82 0.00 39.80 4.61
386 387 3.211963 GGATCCATGCGTGTGGGC 61.212 66.667 6.95 0.00 39.80 5.36
387 388 3.576356 GATCCATGCGTGTGGGCG 61.576 66.667 4.96 0.00 39.80 6.13
388 389 4.094646 ATCCATGCGTGTGGGCGA 62.095 61.111 4.96 0.00 39.80 5.54
389 390 4.758251 TCCATGCGTGTGGGCGAG 62.758 66.667 4.96 0.00 39.80 5.03
391 392 3.049674 CATGCGTGTGGGCGAGTT 61.050 61.111 0.00 0.00 35.06 3.01
392 393 3.049674 ATGCGTGTGGGCGAGTTG 61.050 61.111 0.00 0.00 35.06 3.16
403 404 4.680237 CGAGTTGCCAGACGCCCA 62.680 66.667 0.00 0.00 36.24 5.36
404 405 3.050275 GAGTTGCCAGACGCCCAC 61.050 66.667 0.00 0.00 36.24 4.61
405 406 3.825160 GAGTTGCCAGACGCCCACA 62.825 63.158 0.00 0.00 36.24 4.17
406 407 3.660111 GTTGCCAGACGCCCACAC 61.660 66.667 0.00 0.00 36.24 3.82
419 420 3.240203 CACACGTGTGGGCGTTAG 58.760 61.111 35.65 12.08 43.83 2.34
420 421 1.593209 CACACGTGTGGGCGTTAGT 60.593 57.895 35.65 1.12 43.83 2.24
421 422 1.593209 ACACGTGTGGGCGTTAGTG 60.593 57.895 22.71 0.00 43.83 2.74
422 423 1.593209 CACGTGTGGGCGTTAGTGT 60.593 57.895 7.58 0.00 43.83 3.55
423 424 1.144496 ACGTGTGGGCGTTAGTGTT 59.856 52.632 0.00 0.00 43.04 3.32
424 425 0.877213 ACGTGTGGGCGTTAGTGTTC 60.877 55.000 0.00 0.00 43.04 3.18
425 426 0.599204 CGTGTGGGCGTTAGTGTTCT 60.599 55.000 0.00 0.00 0.00 3.01
426 427 1.145803 GTGTGGGCGTTAGTGTTCTC 58.854 55.000 0.00 0.00 0.00 2.87
427 428 0.319211 TGTGGGCGTTAGTGTTCTCG 60.319 55.000 0.00 0.00 0.00 4.04
428 429 0.038892 GTGGGCGTTAGTGTTCTCGA 60.039 55.000 0.00 0.00 0.00 4.04
429 430 0.675083 TGGGCGTTAGTGTTCTCGAA 59.325 50.000 0.00 0.00 0.00 3.71
430 431 1.068895 TGGGCGTTAGTGTTCTCGAAA 59.931 47.619 0.00 0.00 0.00 3.46
431 432 2.137523 GGGCGTTAGTGTTCTCGAAAA 58.862 47.619 0.00 0.00 0.00 2.29
432 433 2.545106 GGGCGTTAGTGTTCTCGAAAAA 59.455 45.455 0.00 0.00 0.00 1.94
455 456 8.947055 AAAAAGAAATGTGTGAGCATTACTTT 57.053 26.923 0.00 0.00 38.03 2.66
456 457 8.947055 AAAAGAAATGTGTGAGCATTACTTTT 57.053 26.923 0.00 0.00 38.03 2.27
457 458 8.947055 AAAGAAATGTGTGAGCATTACTTTTT 57.053 26.923 0.00 0.00 38.03 1.94
473 474 3.498502 TTTTTGCCCACACGTAGGT 57.501 47.368 5.59 0.00 0.00 3.08
483 484 3.195041 CACGTAGGTGTGTGGACTG 57.805 57.895 7.41 0.00 39.38 3.51
484 485 0.387929 CACGTAGGTGTGTGGACTGT 59.612 55.000 7.41 0.00 39.38 3.55
485 486 1.117150 ACGTAGGTGTGTGGACTGTT 58.883 50.000 0.00 0.00 0.00 3.16
486 487 1.068127 ACGTAGGTGTGTGGACTGTTC 59.932 52.381 0.00 0.00 0.00 3.18
487 488 1.604693 CGTAGGTGTGTGGACTGTTCC 60.605 57.143 0.00 0.00 43.19 3.62
488 489 1.692519 GTAGGTGTGTGGACTGTTCCT 59.307 52.381 0.00 0.00 43.31 3.36
489 490 0.759346 AGGTGTGTGGACTGTTCCTC 59.241 55.000 0.00 0.00 43.31 3.71
490 491 0.759346 GGTGTGTGGACTGTTCCTCT 59.241 55.000 0.00 0.00 43.31 3.69
491 492 1.141053 GGTGTGTGGACTGTTCCTCTT 59.859 52.381 0.00 0.00 43.31 2.85
492 493 2.367567 GGTGTGTGGACTGTTCCTCTTA 59.632 50.000 0.00 0.00 43.31 2.10
493 494 3.008049 GGTGTGTGGACTGTTCCTCTTAT 59.992 47.826 0.00 0.00 43.31 1.73
494 495 4.222145 GGTGTGTGGACTGTTCCTCTTATA 59.778 45.833 0.00 0.00 43.31 0.98
495 496 5.169295 GTGTGTGGACTGTTCCTCTTATAC 58.831 45.833 0.00 0.00 43.31 1.47
496 497 4.836175 TGTGTGGACTGTTCCTCTTATACA 59.164 41.667 0.00 0.00 43.31 2.29
497 498 5.169295 GTGTGGACTGTTCCTCTTATACAC 58.831 45.833 0.00 0.00 43.31 2.90
498 499 4.222145 TGTGGACTGTTCCTCTTATACACC 59.778 45.833 0.00 0.00 43.31 4.16
499 500 4.222145 GTGGACTGTTCCTCTTATACACCA 59.778 45.833 0.00 0.00 43.31 4.17
500 501 4.222145 TGGACTGTTCCTCTTATACACCAC 59.778 45.833 0.00 0.00 43.31 4.16
501 502 4.222145 GGACTGTTCCTCTTATACACCACA 59.778 45.833 0.00 0.00 39.13 4.17
502 503 5.148651 ACTGTTCCTCTTATACACCACAC 57.851 43.478 0.00 0.00 0.00 3.82
503 504 4.591498 ACTGTTCCTCTTATACACCACACA 59.409 41.667 0.00 0.00 0.00 3.72
504 505 5.071250 ACTGTTCCTCTTATACACCACACAA 59.929 40.000 0.00 0.00 0.00 3.33
505 506 5.931294 TGTTCCTCTTATACACCACACAAA 58.069 37.500 0.00 0.00 0.00 2.83
506 507 6.358178 TGTTCCTCTTATACACCACACAAAA 58.642 36.000 0.00 0.00 0.00 2.44
507 508 7.001674 TGTTCCTCTTATACACCACACAAAAT 58.998 34.615 0.00 0.00 0.00 1.82
508 509 7.040755 TGTTCCTCTTATACACCACACAAAATG 60.041 37.037 0.00 0.00 0.00 2.32
509 510 6.539173 TCCTCTTATACACCACACAAAATGT 58.461 36.000 0.00 0.00 44.81 2.71
520 521 2.071778 ACAAAATGTGTGGGCAGACT 57.928 45.000 0.00 0.00 39.72 3.24
521 522 1.956477 ACAAAATGTGTGGGCAGACTC 59.044 47.619 0.00 0.00 39.72 3.36
522 523 1.270550 CAAAATGTGTGGGCAGACTCC 59.729 52.381 0.00 0.00 0.00 3.85
523 524 0.251341 AAATGTGTGGGCAGACTCCC 60.251 55.000 3.67 3.67 46.73 4.30
524 525 1.136329 AATGTGTGGGCAGACTCCCT 61.136 55.000 10.28 0.00 46.67 4.20
525 526 0.252696 ATGTGTGGGCAGACTCCCTA 60.253 55.000 10.28 0.00 46.67 3.53
526 527 0.472925 TGTGTGGGCAGACTCCCTAA 60.473 55.000 10.28 0.00 46.67 2.69
527 528 0.912486 GTGTGGGCAGACTCCCTAAT 59.088 55.000 10.28 0.00 46.67 1.73
528 529 0.911769 TGTGGGCAGACTCCCTAATG 59.088 55.000 10.28 0.00 46.67 1.90
529 530 0.464554 GTGGGCAGACTCCCTAATGC 60.465 60.000 10.28 0.00 46.67 3.56
531 532 4.887615 GCAGACTCCCTAATGCCC 57.112 61.111 0.00 0.00 32.49 5.36
532 533 1.915228 GCAGACTCCCTAATGCCCA 59.085 57.895 0.00 0.00 32.49 5.36
533 534 0.464554 GCAGACTCCCTAATGCCCAC 60.465 60.000 0.00 0.00 32.49 4.61
534 535 0.911769 CAGACTCCCTAATGCCCACA 59.088 55.000 0.00 0.00 0.00 4.17
535 536 0.912486 AGACTCCCTAATGCCCACAC 59.088 55.000 0.00 0.00 0.00 3.82
536 537 0.462047 GACTCCCTAATGCCCACACG 60.462 60.000 0.00 0.00 0.00 4.49
537 538 1.198759 ACTCCCTAATGCCCACACGT 61.199 55.000 0.00 0.00 0.00 4.49
538 539 0.744414 CTCCCTAATGCCCACACGTG 60.744 60.000 15.48 15.48 0.00 4.49
539 540 1.002624 CCCTAATGCCCACACGTGT 60.003 57.895 17.22 17.22 0.00 4.49
540 541 1.305219 CCCTAATGCCCACACGTGTG 61.305 60.000 36.13 36.13 45.23 3.82
556 557 2.248487 GTGTGACACTTATCGACGTCC 58.752 52.381 10.58 0.00 0.00 4.79
568 569 2.756829 TCGACGTCCTACAATTTTGCA 58.243 42.857 10.58 0.00 0.00 4.08
580 581 8.629158 TCCTACAATTTTGCATGGTATTATGTC 58.371 33.333 0.00 0.00 0.00 3.06
583 584 6.127479 ACAATTTTGCATGGTATTATGTCCGT 60.127 34.615 0.00 0.00 0.00 4.69
586 587 4.948341 TGCATGGTATTATGTCCGTACT 57.052 40.909 0.00 0.00 0.00 2.73
593 594 7.210718 TGGTATTATGTCCGTACTATGTCAG 57.789 40.000 0.00 0.00 0.00 3.51
597 598 9.740239 GTATTATGTCCGTACTATGTCAGAAAA 57.260 33.333 0.00 0.00 0.00 2.29
601 602 6.097356 TGTCCGTACTATGTCAGAAAATGTC 58.903 40.000 0.00 0.00 0.00 3.06
639 640 6.235664 TGGATGGAGTTCCTAACACTAAAAC 58.764 40.000 0.00 0.00 36.68 2.43
641 642 4.060205 TGGAGTTCCTAACACTAAAACGC 58.940 43.478 0.00 0.00 36.82 4.84
667 674 9.294030 CTAAAATGTCTACATCAGAATTTTGCC 57.706 33.333 0.00 0.00 36.18 4.52
676 683 6.744112 ACATCAGAATTTTGCCGAAAAGTTA 58.256 32.000 0.00 0.00 34.53 2.24
677 684 6.640907 ACATCAGAATTTTGCCGAAAAGTTAC 59.359 34.615 0.00 0.00 34.53 2.50
678 685 6.385649 TCAGAATTTTGCCGAAAAGTTACT 57.614 33.333 0.00 0.00 34.53 2.24
679 686 6.435428 TCAGAATTTTGCCGAAAAGTTACTC 58.565 36.000 0.00 0.00 34.53 2.59
680 687 5.629435 CAGAATTTTGCCGAAAAGTTACTCC 59.371 40.000 0.00 0.00 34.53 3.85
682 689 2.943036 TTGCCGAAAAGTTACTCCCT 57.057 45.000 0.00 0.00 0.00 4.20
683 690 2.943036 TGCCGAAAAGTTACTCCCTT 57.057 45.000 0.00 0.00 0.00 3.95
686 693 3.268330 GCCGAAAAGTTACTCCCTTAGG 58.732 50.000 0.00 0.00 0.00 2.69
725 750 9.185192 CAGTCTCCTTTGTTGAACAATAAAATC 57.815 33.333 11.97 2.75 38.00 2.17
728 753 8.073768 TCTCCTTTGTTGAACAATAAAATCGAC 58.926 33.333 11.97 0.00 38.00 4.20
741 766 7.437267 ACAATAAAATCGACACTCCCGTTATAG 59.563 37.037 0.00 0.00 0.00 1.31
752 777 7.335627 ACACTCCCGTTATAGAAATGAAATGA 58.664 34.615 0.00 0.00 0.00 2.57
753 778 7.280205 ACACTCCCGTTATAGAAATGAAATGAC 59.720 37.037 0.00 0.00 0.00 3.06
779 804 7.594758 CGATTTCAGAAATTTGCAGGAAAGTTA 59.405 33.333 9.84 0.00 32.09 2.24
853 878 5.709966 AGTTTTGGATGGACGAATTTTAGC 58.290 37.500 0.00 0.00 0.00 3.09
864 889 7.083858 TGGACGAATTTTAGCAAAGAAAGATG 58.916 34.615 0.00 0.00 0.00 2.90
874 899 9.911788 TTTAGCAAAGAAAGATGGAGAGATAAT 57.088 29.630 0.00 0.00 0.00 1.28
875 900 9.911788 TTAGCAAAGAAAGATGGAGAGATAATT 57.088 29.630 0.00 0.00 0.00 1.40
926 951 4.489679 AAACTCTTGCGAAATTCCTGAC 57.510 40.909 0.00 0.00 0.00 3.51
976 1032 1.725066 CGAAGGAGACGAGAGGAGC 59.275 63.158 0.00 0.00 0.00 4.70
977 1033 1.027255 CGAAGGAGACGAGAGGAGCA 61.027 60.000 0.00 0.00 0.00 4.26
978 1034 0.738389 GAAGGAGACGAGAGGAGCAG 59.262 60.000 0.00 0.00 0.00 4.24
979 1035 0.682855 AAGGAGACGAGAGGAGCAGG 60.683 60.000 0.00 0.00 0.00 4.85
980 1036 2.124693 GGAGACGAGAGGAGCAGGG 61.125 68.421 0.00 0.00 0.00 4.45
981 1037 2.043450 AGACGAGAGGAGCAGGGG 60.043 66.667 0.00 0.00 0.00 4.79
982 1038 3.151022 GACGAGAGGAGCAGGGGG 61.151 72.222 0.00 0.00 0.00 5.40
1221 1277 2.685380 CCCGCCTCCTCTTGACCT 60.685 66.667 0.00 0.00 0.00 3.85
1223 1279 1.679898 CCGCCTCCTCTTGACCTTT 59.320 57.895 0.00 0.00 0.00 3.11
1252 1309 0.523966 CGTCTTCTTCGGCAGAGTCT 59.476 55.000 0.00 0.00 31.12 3.24
1258 1315 1.867919 CTTCGGCAGAGTCTCACGGT 61.868 60.000 11.75 0.00 0.00 4.83
1375 1432 6.577638 GCTTCTTAATTCCTACCACCACCTTA 60.578 42.308 0.00 0.00 0.00 2.69
1396 1458 8.813951 ACCTTATGTTGAGTACTAGTTTAGCTT 58.186 33.333 0.00 0.00 0.00 3.74
1495 1559 7.004555 TGATGTTACTCAGTACCATTGTTCT 57.995 36.000 0.00 0.00 0.00 3.01
1621 1692 4.817517 TCCGGTCAGTTTACTTTCAGATC 58.182 43.478 0.00 0.00 0.00 2.75
1624 1695 4.627467 CGGTCAGTTTACTTTCAGATCCTG 59.373 45.833 0.00 0.00 0.00 3.86
1733 1815 5.400485 GCTTCACAATGCTAAACTTGACTTG 59.600 40.000 0.00 0.00 0.00 3.16
1756 1838 1.819288 CGAGTCAGCTTGGGTTCTCTA 59.181 52.381 0.00 0.00 0.00 2.43
1769 1851 5.091552 TGGGTTCTCTAGTGGATAGTTGTT 58.908 41.667 0.00 0.00 32.85 2.83
1797 1879 5.867174 ACTTTTGTTTGGTTGCTACACTTTC 59.133 36.000 0.00 0.00 0.00 2.62
1897 1980 6.885922 AGGTGTATTTATAGTCTTGTGGACC 58.114 40.000 0.00 0.00 45.54 4.46
1903 1986 5.927281 TTATAGTCTTGTGGACCAGTACC 57.073 43.478 0.00 0.00 45.54 3.34
1919 2002 5.014755 ACCAGTACCAGTATTCATTTTCCCA 59.985 40.000 0.00 0.00 0.00 4.37
1935 2018 5.762179 TTTCCCATAGAGTTCACATGAGT 57.238 39.130 0.00 0.00 0.00 3.41
2163 2253 7.334858 AGGAAATTCTTTCTCAGGTGATCTAC 58.665 38.462 0.00 0.00 39.59 2.59
2217 2308 5.857268 ACTTGATTTTATTTTGTGGCAGCT 58.143 33.333 0.00 0.00 0.00 4.24
2219 2310 7.614494 ACTTGATTTTATTTTGTGGCAGCTAT 58.386 30.769 0.00 0.00 0.00 2.97
2237 2328 9.377312 GGCAGCTATTGGAAAACAAAAATTATA 57.623 29.630 0.00 0.00 43.46 0.98
2256 2347 8.553459 AATTATAATACGCAGCAAGCTATCTT 57.447 30.769 0.00 0.00 42.61 2.40
2284 2375 4.098349 TCATATTTTCCATGCCTCAGTTGC 59.902 41.667 0.00 0.00 0.00 4.17
2286 2377 1.243342 TTTCCATGCCTCAGTTGCCG 61.243 55.000 0.00 0.00 0.00 5.69
2312 2403 1.414919 TGGATAGAACCCATGGCGTAC 59.585 52.381 6.09 0.00 0.00 3.67
2344 2435 7.494211 TGAATTTAATCATTTGCATGCTAGCT 58.506 30.769 20.33 0.00 34.99 3.32
2345 2436 7.982919 TGAATTTAATCATTTGCATGCTAGCTT 59.017 29.630 20.33 6.81 34.99 3.74
2359 2450 2.715046 CTAGCTTGTCCATTTGCCTCA 58.285 47.619 0.00 0.00 0.00 3.86
2360 2451 1.542492 AGCTTGTCCATTTGCCTCAG 58.458 50.000 0.00 0.00 0.00 3.35
2367 2459 3.073798 TGTCCATTTGCCTCAGTTCCTAA 59.926 43.478 0.00 0.00 0.00 2.69
2369 2461 4.336713 GTCCATTTGCCTCAGTTCCTAATC 59.663 45.833 0.00 0.00 0.00 1.75
2372 2464 2.698855 TGCCTCAGTTCCTAATCAGC 57.301 50.000 0.00 0.00 0.00 4.26
2408 2500 0.811281 GAGGTTTGGAGGCAATTCGG 59.189 55.000 0.00 0.00 0.00 4.30
2439 2531 3.730761 CGCCTGTTGCTGCCTGAC 61.731 66.667 0.00 0.00 38.05 3.51
2447 2539 0.111061 TTGCTGCCTGACAATGGACT 59.889 50.000 0.00 0.00 0.00 3.85
2448 2540 0.111061 TGCTGCCTGACAATGGACTT 59.889 50.000 0.00 0.00 0.00 3.01
2449 2541 0.524862 GCTGCCTGACAATGGACTTG 59.475 55.000 0.00 0.00 40.90 3.16
2450 2542 1.171308 CTGCCTGACAATGGACTTGG 58.829 55.000 0.00 0.00 39.30 3.61
2451 2543 0.770499 TGCCTGACAATGGACTTGGA 59.230 50.000 0.00 0.00 39.30 3.53
2452 2544 1.168714 GCCTGACAATGGACTTGGAC 58.831 55.000 0.00 0.00 39.30 4.02
2468 2560 6.260271 GGACTTGGACTACATATTAAAGTGCC 59.740 42.308 0.00 0.00 30.95 5.01
2470 2562 6.823689 ACTTGGACTACATATTAAAGTGCCTG 59.176 38.462 0.00 0.00 31.26 4.85
2473 2565 6.382859 TGGACTACATATTAAAGTGCCTGAGA 59.617 38.462 0.00 0.00 31.26 3.27
2477 2569 9.113838 ACTACATATTAAAGTGCCTGAGAAATG 57.886 33.333 0.00 0.00 0.00 2.32
2484 2576 2.038952 AGTGCCTGAGAAATGTGCTACA 59.961 45.455 0.00 0.00 0.00 2.74
2526 2620 6.838612 AGCTTCTTCTAGTCATATCCTTGAGT 59.161 38.462 0.00 0.00 33.85 3.41
2532 2626 7.898014 TCTAGTCATATCCTTGAGTGCTTTA 57.102 36.000 0.00 0.00 31.77 1.85
2554 2648 7.925043 TTATCCAAAGCAATGCATTTTGATT 57.075 28.000 19.34 10.16 36.83 2.57
2616 2710 5.414454 TGTTTCATCATACTTAACCAGTGGC 59.586 40.000 9.78 0.00 35.97 5.01
2635 2729 2.480244 GGCGAATCCAGGAAGAAAATGC 60.480 50.000 0.00 0.00 34.01 3.56
2641 2735 2.158325 TCCAGGAAGAAAATGCAGGGTT 60.158 45.455 0.00 0.00 0.00 4.11
2652 2748 3.615224 ATGCAGGGTTGGCTTAAATTG 57.385 42.857 0.00 0.00 0.00 2.32
2759 2858 7.716560 AGAGAAGCAACAATAAAAAGGCAAAAT 59.283 29.630 0.00 0.00 0.00 1.82
2825 3054 9.736023 GCCTTCTAACCAAAATATAGAAATGTG 57.264 33.333 0.00 0.00 35.78 3.21
2842 3080 2.983592 GGGTCCAAGTGCCCAACG 60.984 66.667 0.00 0.00 44.23 4.10
2871 3109 6.032094 GTCATCTGTCCAAATTAGCACAATG 58.968 40.000 0.00 0.00 0.00 2.82
2894 3134 2.559698 ATTCCAACACACCATCGTCA 57.440 45.000 0.00 0.00 0.00 4.35
2917 3157 3.695606 GACCACCTCGCTGAGCCA 61.696 66.667 0.00 0.00 0.00 4.75
2918 3158 3.655810 GACCACCTCGCTGAGCCAG 62.656 68.421 0.00 0.00 34.12 4.85
2919 3159 3.385384 CCACCTCGCTGAGCCAGA 61.385 66.667 0.00 0.00 32.44 3.86
2921 3161 1.004560 CACCTCGCTGAGCCAGAAA 60.005 57.895 0.00 0.00 32.44 2.52
2923 3163 0.603975 ACCTCGCTGAGCCAGAAAAC 60.604 55.000 0.00 0.00 32.44 2.43
2940 3201 6.990349 CCAGAAAACAAAGACCTACTAGAACA 59.010 38.462 0.00 0.00 0.00 3.18
2973 3234 1.689575 GCAGGTCCCTACTCATCTGGA 60.690 57.143 0.00 0.00 0.00 3.86
3330 3591 2.749621 GGGATAACTGAACTGCTTGTGG 59.250 50.000 0.00 0.00 0.00 4.17
3331 3592 2.162408 GGATAACTGAACTGCTTGTGGC 59.838 50.000 0.00 0.00 42.22 5.01
3332 3593 1.604604 TAACTGAACTGCTTGTGGCC 58.395 50.000 0.00 0.00 40.92 5.36
3333 3594 0.106519 AACTGAACTGCTTGTGGCCT 60.107 50.000 3.32 0.00 40.92 5.19
3334 3595 0.106519 ACTGAACTGCTTGTGGCCTT 60.107 50.000 3.32 0.00 40.92 4.35
3335 3596 0.313043 CTGAACTGCTTGTGGCCTTG 59.687 55.000 3.32 0.00 40.92 3.61
3340 3601 2.383855 ACTGCTTGTGGCCTTGTAAAA 58.616 42.857 3.32 0.00 40.92 1.52
3341 3602 2.763448 ACTGCTTGTGGCCTTGTAAAAA 59.237 40.909 3.32 0.00 40.92 1.94
3342 3603 3.387699 ACTGCTTGTGGCCTTGTAAAAAT 59.612 39.130 3.32 0.00 40.92 1.82
3348 3609 5.474578 TGTGGCCTTGTAAAAATTGCATA 57.525 34.783 3.32 0.00 0.00 3.14
3397 3660 8.406172 TGTAAATCTGAACAAGTTTTCTTTGC 57.594 30.769 0.00 0.00 38.17 3.68
3400 3663 5.643379 TCTGAACAAGTTTTCTTTGCTGT 57.357 34.783 0.00 0.00 38.17 4.40
3411 3675 1.572085 CTTTGCTGTGGGACTGCGAG 61.572 60.000 0.00 0.00 44.63 5.03
3418 3682 0.598065 GTGGGACTGCGAGCAAATTT 59.402 50.000 0.00 0.00 0.00 1.82
3480 4003 6.712276 ACTTAGAGTTTACTGGCTTAGCAAT 58.288 36.000 6.53 0.00 0.00 3.56
3486 4009 7.281100 AGAGTTTACTGGCTTAGCAATGTAATC 59.719 37.037 6.53 10.29 0.00 1.75
3521 4044 5.416326 ACAAATAAATACTTGGCGGCTTGTA 59.584 36.000 11.43 13.29 0.00 2.41
3533 4056 2.662596 CTTGTACCTCCAGCGGCA 59.337 61.111 1.45 0.00 0.00 5.69
3539 4062 4.809496 CCTCCAGCGGCATGGCTT 62.809 66.667 18.09 2.32 42.53 4.35
3540 4063 3.207669 CTCCAGCGGCATGGCTTC 61.208 66.667 18.09 8.88 42.53 3.86
3541 4064 3.694058 CTCCAGCGGCATGGCTTCT 62.694 63.158 18.09 11.09 42.53 2.85
3542 4065 3.515286 CCAGCGGCATGGCTTCTG 61.515 66.667 22.81 22.81 42.53 3.02
3546 4069 3.515286 CGGCATGGCTTCTGGCTG 61.515 66.667 18.09 0.00 41.46 4.85
3547 4070 2.362120 GGCATGGCTTCTGGCTGT 60.362 61.111 12.86 0.00 41.46 4.40
3548 4071 2.707849 GGCATGGCTTCTGGCTGTG 61.708 63.158 12.86 0.00 41.46 3.66
3549 4072 1.975407 GCATGGCTTCTGGCTGTGT 60.975 57.895 0.00 0.00 41.46 3.72
3550 4073 0.677731 GCATGGCTTCTGGCTGTGTA 60.678 55.000 0.00 0.00 41.46 2.90
3551 4074 1.376543 CATGGCTTCTGGCTGTGTAG 58.623 55.000 0.00 0.00 41.46 2.74
3609 4138 2.489329 TGGCTAACTGCTGCATTCTTTC 59.511 45.455 1.31 0.00 42.39 2.62
3637 4166 6.547141 TCTTCTATATGGTGAATGGGCTTTTG 59.453 38.462 0.00 0.00 0.00 2.44
3638 4167 5.765510 TCTATATGGTGAATGGGCTTTTGT 58.234 37.500 0.00 0.00 0.00 2.83
3640 4169 7.350382 TCTATATGGTGAATGGGCTTTTGTAA 58.650 34.615 0.00 0.00 0.00 2.41
3641 4170 8.004215 TCTATATGGTGAATGGGCTTTTGTAAT 58.996 33.333 0.00 0.00 0.00 1.89
3642 4171 9.295825 CTATATGGTGAATGGGCTTTTGTAATA 57.704 33.333 0.00 0.00 0.00 0.98
3643 4172 8.725606 ATATGGTGAATGGGCTTTTGTAATAT 57.274 30.769 0.00 0.00 0.00 1.28
3644 4173 6.865834 TGGTGAATGGGCTTTTGTAATATT 57.134 33.333 0.00 0.00 0.00 1.28
3646 4175 7.684529 TGGTGAATGGGCTTTTGTAATATTTT 58.315 30.769 0.00 0.00 0.00 1.82
3647 4176 8.160106 TGGTGAATGGGCTTTTGTAATATTTTT 58.840 29.630 0.00 0.00 0.00 1.94
3685 4214 7.338957 GCTTCACCCGGAGTACTATAGTAATAT 59.661 40.741 14.20 3.94 31.52 1.28
3686 4215 9.240734 CTTCACCCGGAGTACTATAGTAATATT 57.759 37.037 14.20 1.27 31.52 1.28
3687 4216 9.592196 TTCACCCGGAGTACTATAGTAATATTT 57.408 33.333 14.20 0.00 31.52 1.40
3688 4217 9.592196 TCACCCGGAGTACTATAGTAATATTTT 57.408 33.333 14.20 0.00 31.52 1.82
3708 4239 2.200373 TTGTTTTCTAGGGCAGGCTC 57.800 50.000 0.00 0.00 0.00 4.70
3726 4257 1.377725 CGAGCCTGTTGAAGCCCAT 60.378 57.895 0.00 0.00 0.00 4.00
3775 4306 6.248433 ACCTCTTTATGAGCTTCCATTTGAA 58.752 36.000 0.00 0.00 41.35 2.69
3784 4315 3.772060 CTTCCATTTGAAGCTACTGGC 57.228 47.619 0.00 0.00 43.79 4.85
3785 4316 2.128771 TCCATTTGAAGCTACTGGCC 57.871 50.000 0.00 0.00 43.05 5.36
3786 4317 1.635487 TCCATTTGAAGCTACTGGCCT 59.365 47.619 3.32 0.00 43.05 5.19
3787 4318 1.747355 CCATTTGAAGCTACTGGCCTG 59.253 52.381 8.29 8.29 43.05 4.85
3788 4319 2.618816 CCATTTGAAGCTACTGGCCTGA 60.619 50.000 17.64 0.00 43.05 3.86
3793 4324 1.825474 GAAGCTACTGGCCTGACTACA 59.175 52.381 17.64 0.00 43.05 2.74
3863 4394 0.623723 GGGGCAACTTACCTCCATCA 59.376 55.000 0.00 0.00 0.00 3.07
3878 4409 2.971598 ATCACTGCAACCTCCCCCG 61.972 63.158 0.00 0.00 0.00 5.73
3921 4452 2.504367 CTTTTGTCGACTGGGGTTGAT 58.496 47.619 17.92 0.00 38.06 2.57
3923 4454 2.178912 TTGTCGACTGGGGTTGATTC 57.821 50.000 17.92 0.00 38.06 2.52
3924 4455 1.052617 TGTCGACTGGGGTTGATTCA 58.947 50.000 17.92 0.00 38.06 2.57
3931 4462 2.025887 ACTGGGGTTGATTCATCACCTC 60.026 50.000 15.39 8.65 36.36 3.85
3948 4479 5.240891 TCACCTCTCTGAAATGTTGATCAC 58.759 41.667 0.00 0.00 0.00 3.06
3951 4482 6.875726 CACCTCTCTGAAATGTTGATCACTTA 59.124 38.462 0.00 0.00 0.00 2.24
3973 4504 3.391296 AGGATGCTGTATATTTGACCGGT 59.609 43.478 6.92 6.92 0.00 5.28
3974 4505 4.134563 GGATGCTGTATATTTGACCGGTT 58.865 43.478 9.42 0.00 0.00 4.44
3981 4512 7.011950 TGCTGTATATTTGACCGGTTATTGAAG 59.988 37.037 9.42 2.71 0.00 3.02
4003 4534 7.916977 TGAAGTGTGTGAAAGAAATTTCATCAG 59.083 33.333 19.99 0.00 42.20 2.90
4015 4546 7.945134 AGAAATTTCATCAGTAACAAGTGCTT 58.055 30.769 19.99 0.00 0.00 3.91
4016 4547 7.864379 AGAAATTTCATCAGTAACAAGTGCTTG 59.136 33.333 19.99 10.09 45.58 4.01
4017 4548 4.488126 TTCATCAGTAACAAGTGCTTGC 57.512 40.909 11.43 0.00 44.03 4.01
4018 4549 3.743521 TCATCAGTAACAAGTGCTTGCT 58.256 40.909 11.43 2.73 44.03 3.91
4019 4550 4.136796 TCATCAGTAACAAGTGCTTGCTT 58.863 39.130 11.43 7.98 44.03 3.91
4020 4551 4.214119 TCATCAGTAACAAGTGCTTGCTTC 59.786 41.667 11.43 0.00 44.03 3.86
4021 4552 2.878406 TCAGTAACAAGTGCTTGCTTCC 59.122 45.455 11.43 0.00 44.03 3.46
4022 4553 2.880890 CAGTAACAAGTGCTTGCTTCCT 59.119 45.455 11.43 1.15 44.03 3.36
4023 4554 2.880890 AGTAACAAGTGCTTGCTTCCTG 59.119 45.455 11.43 0.00 44.03 3.86
4024 4555 1.767759 AACAAGTGCTTGCTTCCTGT 58.232 45.000 11.43 0.00 44.03 4.00
4025 4556 2.638480 ACAAGTGCTTGCTTCCTGTA 57.362 45.000 11.43 0.00 44.03 2.74
4026 4557 3.146104 ACAAGTGCTTGCTTCCTGTAT 57.854 42.857 11.43 0.00 44.03 2.29
4027 4558 4.286297 ACAAGTGCTTGCTTCCTGTATA 57.714 40.909 11.43 0.00 44.03 1.47
4028 4559 4.003648 ACAAGTGCTTGCTTCCTGTATAC 58.996 43.478 11.43 0.00 44.03 1.47
4029 4560 3.981071 AGTGCTTGCTTCCTGTATACA 57.019 42.857 5.25 5.25 0.00 2.29
4030 4561 3.866651 AGTGCTTGCTTCCTGTATACAG 58.133 45.455 23.58 23.58 43.40 2.74
4031 4562 3.515502 AGTGCTTGCTTCCTGTATACAGA 59.484 43.478 30.41 15.68 46.59 3.41
4032 4563 4.163078 AGTGCTTGCTTCCTGTATACAGAT 59.837 41.667 30.41 0.00 46.59 2.90
4033 4564 5.363868 AGTGCTTGCTTCCTGTATACAGATA 59.636 40.000 30.41 16.98 46.59 1.98
4034 4565 5.694006 GTGCTTGCTTCCTGTATACAGATAG 59.306 44.000 30.41 24.87 46.59 2.08
4035 4566 5.598417 TGCTTGCTTCCTGTATACAGATAGA 59.402 40.000 30.41 17.93 46.59 1.98
4036 4567 6.155827 GCTTGCTTCCTGTATACAGATAGAG 58.844 44.000 30.41 21.25 46.59 2.43
4037 4568 6.239176 GCTTGCTTCCTGTATACAGATAGAGT 60.239 42.308 30.41 0.00 46.59 3.24
4038 4569 7.661536 TTGCTTCCTGTATACAGATAGAGTT 57.338 36.000 30.41 0.00 46.59 3.01
4039 4570 7.661536 TGCTTCCTGTATACAGATAGAGTTT 57.338 36.000 30.41 0.00 46.59 2.66
4040 4571 7.717568 TGCTTCCTGTATACAGATAGAGTTTC 58.282 38.462 30.41 14.58 46.59 2.78
4041 4572 7.342026 TGCTTCCTGTATACAGATAGAGTTTCA 59.658 37.037 30.41 16.42 46.59 2.69
4042 4573 8.364142 GCTTCCTGTATACAGATAGAGTTTCAT 58.636 37.037 30.41 0.00 46.59 2.57
4043 4574 9.906660 CTTCCTGTATACAGATAGAGTTTCATC 57.093 37.037 30.41 0.00 46.59 2.92
4044 4575 8.996651 TCCTGTATACAGATAGAGTTTCATCA 57.003 34.615 30.41 0.00 46.59 3.07
4045 4576 9.421399 TCCTGTATACAGATAGAGTTTCATCAA 57.579 33.333 30.41 0.00 46.59 2.57
4053 4584 9.950496 ACAGATAGAGTTTCATCAATAACAAGT 57.050 29.630 0.00 0.00 0.00 3.16
4055 4586 8.887717 AGATAGAGTTTCATCAATAACAAGTGC 58.112 33.333 0.00 0.00 0.00 4.40
4056 4587 8.798859 ATAGAGTTTCATCAATAACAAGTGCT 57.201 30.769 0.00 0.00 0.00 4.40
4104 4635 6.544928 TTATTGGCAGTGAGATAGTTCTGA 57.455 37.500 0.00 0.00 30.30 3.27
4169 4700 7.490725 CCAACATTTGTTCAGACACAAAATACA 59.509 33.333 12.17 0.00 46.95 2.29
4191 4722 5.014544 ACATTATCCTAGGCAATGTAGGCAT 59.985 40.000 27.24 11.59 40.24 4.40
4360 4891 2.549992 CCACCGTTCTTCTTCCACATCA 60.550 50.000 0.00 0.00 0.00 3.07
4459 4990 2.915659 TCCCTTGTGCCGAGACGT 60.916 61.111 0.00 0.00 0.00 4.34
4543 5074 4.719106 AGGACTGCTGCTGGCTGC 62.719 66.667 12.30 15.66 42.51 5.25
4681 5216 1.343465 TCTGTTTCGTGAGGGAGGAAC 59.657 52.381 0.00 0.00 0.00 3.62
4697 5232 4.014569 AGGAACTCTTTTCCTCTTCTGC 57.985 45.455 0.00 0.00 45.32 4.26
4792 5337 6.804783 GGTTGGTACTGATATTTTGGAAAACG 59.195 38.462 0.00 0.00 0.00 3.60
4793 5338 5.945155 TGGTACTGATATTTTGGAAAACGC 58.055 37.500 0.00 0.00 0.00 4.84
4848 5395 7.825331 TTGGTCATCTAACATTTTGGTTACA 57.175 32.000 0.00 0.00 32.29 2.41
4874 5421 6.399639 TTTAGGTGCGAAAAGGAAGATTTT 57.600 33.333 0.00 0.00 35.12 1.82
4875 5422 4.937201 AGGTGCGAAAAGGAAGATTTTT 57.063 36.364 0.00 0.00 32.62 1.94
4903 5451 3.067106 CGTACCTTGTGTGCAGATTCTT 58.933 45.455 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.034756 ACATGGCAACTGTCGTAGCA 59.965 50.000 0.00 0.00 37.61 3.49
1 2 1.659098 GTACATGGCAACTGTCGTAGC 59.341 52.381 0.00 0.00 37.61 3.58
2 3 2.268298 GGTACATGGCAACTGTCGTAG 58.732 52.381 0.00 0.00 37.61 3.51
3 4 1.619332 TGGTACATGGCAACTGTCGTA 59.381 47.619 0.00 0.00 37.61 3.43
4 5 0.394938 TGGTACATGGCAACTGTCGT 59.605 50.000 0.00 0.00 37.61 4.34
5 6 3.225272 TGGTACATGGCAACTGTCG 57.775 52.632 0.00 0.00 37.61 4.35
22 23 4.468643 GAATTGCCATGTGTTTTTGCATG 58.531 39.130 0.00 0.00 41.37 4.06
23 24 3.186817 CGAATTGCCATGTGTTTTTGCAT 59.813 39.130 0.00 0.00 0.00 3.96
24 25 2.543012 CGAATTGCCATGTGTTTTTGCA 59.457 40.909 0.00 0.00 0.00 4.08
25 26 2.096318 CCGAATTGCCATGTGTTTTTGC 60.096 45.455 0.00 0.00 0.00 3.68
26 27 2.479656 CCCGAATTGCCATGTGTTTTTG 59.520 45.455 0.00 0.00 0.00 2.44
27 28 2.103941 ACCCGAATTGCCATGTGTTTTT 59.896 40.909 0.00 0.00 0.00 1.94
28 29 1.691434 ACCCGAATTGCCATGTGTTTT 59.309 42.857 0.00 0.00 0.00 2.43
29 30 1.337118 ACCCGAATTGCCATGTGTTT 58.663 45.000 0.00 0.00 0.00 2.83
30 31 2.208132 TACCCGAATTGCCATGTGTT 57.792 45.000 0.00 0.00 0.00 3.32
31 32 2.208132 TTACCCGAATTGCCATGTGT 57.792 45.000 0.00 0.00 0.00 3.72
32 33 3.192422 TCTTTTACCCGAATTGCCATGTG 59.808 43.478 0.00 0.00 0.00 3.21
33 34 3.426615 TCTTTTACCCGAATTGCCATGT 58.573 40.909 0.00 0.00 0.00 3.21
34 35 3.694072 TCTCTTTTACCCGAATTGCCATG 59.306 43.478 0.00 0.00 0.00 3.66
35 36 3.947834 CTCTCTTTTACCCGAATTGCCAT 59.052 43.478 0.00 0.00 0.00 4.40
36 37 3.244770 ACTCTCTTTTACCCGAATTGCCA 60.245 43.478 0.00 0.00 0.00 4.92
37 38 3.344515 ACTCTCTTTTACCCGAATTGCC 58.655 45.455 0.00 0.00 0.00 4.52
38 39 4.723248 CAACTCTCTTTTACCCGAATTGC 58.277 43.478 0.00 0.00 0.00 3.56
39 40 4.379499 GGCAACTCTCTTTTACCCGAATTG 60.379 45.833 0.00 0.00 0.00 2.32
40 41 3.756963 GGCAACTCTCTTTTACCCGAATT 59.243 43.478 0.00 0.00 0.00 2.17
41 42 3.244770 TGGCAACTCTCTTTTACCCGAAT 60.245 43.478 0.00 0.00 37.61 3.34
42 43 2.105134 TGGCAACTCTCTTTTACCCGAA 59.895 45.455 0.00 0.00 37.61 4.30
43 44 1.695242 TGGCAACTCTCTTTTACCCGA 59.305 47.619 0.00 0.00 37.61 5.14
44 45 2.178912 TGGCAACTCTCTTTTACCCG 57.821 50.000 0.00 0.00 37.61 5.28
45 46 3.691609 CAGATGGCAACTCTCTTTTACCC 59.308 47.826 0.00 0.00 37.61 3.69
46 47 3.127721 GCAGATGGCAACTCTCTTTTACC 59.872 47.826 0.00 0.00 43.97 2.85
47 48 4.348198 GCAGATGGCAACTCTCTTTTAC 57.652 45.455 0.00 0.00 43.97 2.01
67 68 1.133216 GCCCTAGCTTTGCTTGTAAGC 59.867 52.381 9.59 9.59 46.47 3.09
68 69 2.421424 CTGCCCTAGCTTTGCTTGTAAG 59.579 50.000 0.00 0.00 40.44 2.34
69 70 2.224769 ACTGCCCTAGCTTTGCTTGTAA 60.225 45.455 0.00 0.00 40.44 2.41
70 71 1.351017 ACTGCCCTAGCTTTGCTTGTA 59.649 47.619 0.00 0.00 40.44 2.41
71 72 0.111253 ACTGCCCTAGCTTTGCTTGT 59.889 50.000 0.00 0.00 40.44 3.16
72 73 1.068055 CAACTGCCCTAGCTTTGCTTG 60.068 52.381 0.00 0.00 40.44 4.01
73 74 1.251251 CAACTGCCCTAGCTTTGCTT 58.749 50.000 0.00 0.00 40.44 3.91
74 75 1.246737 GCAACTGCCCTAGCTTTGCT 61.247 55.000 9.28 0.00 46.60 3.91
75 76 1.213799 GCAACTGCCCTAGCTTTGC 59.786 57.895 0.00 0.00 45.27 3.68
86 87 1.508088 GCAGGTACATGGCAACTGC 59.492 57.895 19.83 19.83 46.24 4.40
87 88 0.806868 CTGCAGGTACATGGCAACTG 59.193 55.000 9.91 9.63 37.06 3.16
88 89 0.692476 TCTGCAGGTACATGGCAACT 59.308 50.000 15.13 0.00 37.06 3.16
89 90 1.533625 TTCTGCAGGTACATGGCAAC 58.466 50.000 15.13 0.00 37.06 4.17
90 91 1.885887 GTTTCTGCAGGTACATGGCAA 59.114 47.619 15.13 0.00 37.06 4.52
91 92 1.202867 TGTTTCTGCAGGTACATGGCA 60.203 47.619 15.13 7.36 35.96 4.92
92 93 1.200020 GTGTTTCTGCAGGTACATGGC 59.800 52.381 19.87 2.68 0.00 4.40
93 94 2.503331 TGTGTTTCTGCAGGTACATGG 58.497 47.619 19.87 0.00 0.00 3.66
94 95 3.119743 CCATGTGTTTCTGCAGGTACATG 60.120 47.826 27.55 27.55 42.88 3.21
95 96 3.084039 CCATGTGTTTCTGCAGGTACAT 58.916 45.455 19.87 17.54 0.00 2.29
96 97 2.503331 CCATGTGTTTCTGCAGGTACA 58.497 47.619 15.13 15.09 0.00 2.90
97 98 1.200020 GCCATGTGTTTCTGCAGGTAC 59.800 52.381 15.13 12.60 0.00 3.34
98 99 1.202867 TGCCATGTGTTTCTGCAGGTA 60.203 47.619 15.13 0.00 0.00 3.08
99 100 0.467844 TGCCATGTGTTTCTGCAGGT 60.468 50.000 15.13 0.00 0.00 4.00
100 101 0.675083 TTGCCATGTGTTTCTGCAGG 59.325 50.000 15.13 0.00 32.88 4.85
101 102 1.338973 AGTTGCCATGTGTTTCTGCAG 59.661 47.619 7.63 7.63 32.88 4.41
102 103 1.067364 CAGTTGCCATGTGTTTCTGCA 59.933 47.619 0.00 0.00 0.00 4.41
103 104 1.774639 CAGTTGCCATGTGTTTCTGC 58.225 50.000 0.00 0.00 0.00 4.26
104 105 1.774639 GCAGTTGCCATGTGTTTCTG 58.225 50.000 0.00 0.00 34.31 3.02
116 117 0.389426 CATCCAAAGCTGGCAGTTGC 60.389 55.000 17.16 2.22 43.17 4.17
117 118 0.963962 ACATCCAAAGCTGGCAGTTG 59.036 50.000 17.16 13.14 43.17 3.16
118 119 0.963962 CACATCCAAAGCTGGCAGTT 59.036 50.000 17.16 7.32 43.17 3.16
119 120 0.896940 CCACATCCAAAGCTGGCAGT 60.897 55.000 17.16 0.00 43.17 4.40
120 121 1.601419 CCCACATCCAAAGCTGGCAG 61.601 60.000 10.94 10.94 43.17 4.85
121 122 1.607178 CCCACATCCAAAGCTGGCA 60.607 57.895 0.00 0.00 43.17 4.92
122 123 3.010413 GCCCACATCCAAAGCTGGC 62.010 63.158 0.00 0.00 43.17 4.85
123 124 0.034186 TAGCCCACATCCAAAGCTGG 60.034 55.000 0.00 0.00 45.08 4.85
124 125 1.679680 CATAGCCCACATCCAAAGCTG 59.320 52.381 0.00 0.00 35.03 4.24
125 126 1.565759 TCATAGCCCACATCCAAAGCT 59.434 47.619 0.00 0.00 37.58 3.74
126 127 1.952296 CTCATAGCCCACATCCAAAGC 59.048 52.381 0.00 0.00 0.00 3.51
127 128 3.565764 TCTCATAGCCCACATCCAAAG 57.434 47.619 0.00 0.00 0.00 2.77
128 129 3.435457 CCATCTCATAGCCCACATCCAAA 60.435 47.826 0.00 0.00 0.00 3.28
129 130 2.107031 CCATCTCATAGCCCACATCCAA 59.893 50.000 0.00 0.00 0.00 3.53
130 131 1.701292 CCATCTCATAGCCCACATCCA 59.299 52.381 0.00 0.00 0.00 3.41
131 132 1.004044 CCCATCTCATAGCCCACATCC 59.996 57.143 0.00 0.00 0.00 3.51
132 133 1.612726 GCCCATCTCATAGCCCACATC 60.613 57.143 0.00 0.00 0.00 3.06
133 134 0.403271 GCCCATCTCATAGCCCACAT 59.597 55.000 0.00 0.00 0.00 3.21
134 135 1.839191 GCCCATCTCATAGCCCACA 59.161 57.895 0.00 0.00 0.00 4.17
135 136 1.302033 CGCCCATCTCATAGCCCAC 60.302 63.158 0.00 0.00 0.00 4.61
136 137 1.766059 ACGCCCATCTCATAGCCCA 60.766 57.895 0.00 0.00 0.00 5.36
137 138 1.302033 CACGCCCATCTCATAGCCC 60.302 63.158 0.00 0.00 0.00 5.19
138 139 0.882042 CACACGCCCATCTCATAGCC 60.882 60.000 0.00 0.00 0.00 3.93
139 140 0.882042 CCACACGCCCATCTCATAGC 60.882 60.000 0.00 0.00 0.00 2.97
140 141 0.250038 CCCACACGCCCATCTCATAG 60.250 60.000 0.00 0.00 0.00 2.23
141 142 1.829456 CCCACACGCCCATCTCATA 59.171 57.895 0.00 0.00 0.00 2.15
142 143 2.591753 CCCACACGCCCATCTCAT 59.408 61.111 0.00 0.00 0.00 2.90
143 144 4.408821 GCCCACACGCCCATCTCA 62.409 66.667 0.00 0.00 0.00 3.27
150 151 2.845752 TATCACTTCGCCCACACGCC 62.846 60.000 0.00 0.00 0.00 5.68
151 152 1.017177 TTATCACTTCGCCCACACGC 61.017 55.000 0.00 0.00 0.00 5.34
152 153 1.127951 GTTTATCACTTCGCCCACACG 59.872 52.381 0.00 0.00 0.00 4.49
153 154 1.127951 CGTTTATCACTTCGCCCACAC 59.872 52.381 0.00 0.00 0.00 3.82
154 155 1.434555 CGTTTATCACTTCGCCCACA 58.565 50.000 0.00 0.00 0.00 4.17
155 156 0.096454 GCGTTTATCACTTCGCCCAC 59.904 55.000 0.00 0.00 42.33 4.61
156 157 2.462503 GCGTTTATCACTTCGCCCA 58.537 52.632 0.00 0.00 42.33 5.36
159 160 0.096454 GTGGGCGTTTATCACTTCGC 59.904 55.000 0.00 0.00 46.42 4.70
160 161 1.127951 GTGTGGGCGTTTATCACTTCG 59.872 52.381 0.00 0.00 33.04 3.79
161 162 2.095919 GTGTGTGGGCGTTTATCACTTC 60.096 50.000 0.00 0.00 33.04 3.01
162 163 1.877443 GTGTGTGGGCGTTTATCACTT 59.123 47.619 0.00 0.00 33.04 3.16
163 164 1.519408 GTGTGTGGGCGTTTATCACT 58.481 50.000 0.00 0.00 33.04 3.41
164 165 0.519961 GGTGTGTGGGCGTTTATCAC 59.480 55.000 0.00 0.00 0.00 3.06
165 166 0.108774 TGGTGTGTGGGCGTTTATCA 59.891 50.000 0.00 0.00 0.00 2.15
166 167 0.802494 CTGGTGTGTGGGCGTTTATC 59.198 55.000 0.00 0.00 0.00 1.75
167 168 1.241315 GCTGGTGTGTGGGCGTTTAT 61.241 55.000 0.00 0.00 0.00 1.40
168 169 1.894756 GCTGGTGTGTGGGCGTTTA 60.895 57.895 0.00 0.00 0.00 2.01
169 170 3.216292 GCTGGTGTGTGGGCGTTT 61.216 61.111 0.00 0.00 0.00 3.60
175 176 4.351054 GAGGGGGCTGGTGTGTGG 62.351 72.222 0.00 0.00 0.00 4.17
176 177 3.252284 AGAGGGGGCTGGTGTGTG 61.252 66.667 0.00 0.00 0.00 3.82
177 178 3.252284 CAGAGGGGGCTGGTGTGT 61.252 66.667 0.00 0.00 32.26 3.72
178 179 4.729918 GCAGAGGGGGCTGGTGTG 62.730 72.222 0.00 0.00 36.41 3.82
187 188 4.680237 TTCACGCACGCAGAGGGG 62.680 66.667 0.00 0.00 35.05 4.79
188 189 2.664851 TTTCACGCACGCAGAGGG 60.665 61.111 0.00 0.00 37.05 4.30
189 190 2.551270 GTTTCACGCACGCAGAGG 59.449 61.111 0.00 0.00 0.00 3.69
190 191 2.551270 GGTTTCACGCACGCAGAG 59.449 61.111 0.00 0.00 0.00 3.35
191 192 2.970324 GGGTTTCACGCACGCAGA 60.970 61.111 0.00 0.00 0.00 4.26
192 193 2.616330 ATGGGTTTCACGCACGCAG 61.616 57.895 0.00 0.00 43.92 5.18
193 194 2.593148 ATGGGTTTCACGCACGCA 60.593 55.556 0.00 0.00 43.92 5.24
194 195 2.126888 CATGGGTTTCACGCACGC 60.127 61.111 0.00 0.00 43.92 5.34
195 196 1.082169 CACATGGGTTTCACGCACG 60.082 57.895 0.00 0.00 43.92 5.34
196 197 0.317770 CACACATGGGTTTCACGCAC 60.318 55.000 0.00 0.00 43.92 5.34
197 198 1.451337 CCACACATGGGTTTCACGCA 61.451 55.000 0.00 0.00 45.21 5.24
198 199 1.285641 CCACACATGGGTTTCACGC 59.714 57.895 0.00 0.00 43.04 5.34
207 208 1.259609 AGCAATTCACCCACACATGG 58.740 50.000 0.00 0.00 46.81 3.66
208 209 4.236935 GTTTAGCAATTCACCCACACATG 58.763 43.478 0.00 0.00 0.00 3.21
209 210 3.057596 CGTTTAGCAATTCACCCACACAT 60.058 43.478 0.00 0.00 0.00 3.21
210 211 2.292016 CGTTTAGCAATTCACCCACACA 59.708 45.455 0.00 0.00 0.00 3.72
211 212 2.928694 CGTTTAGCAATTCACCCACAC 58.071 47.619 0.00 0.00 0.00 3.82
225 226 1.852067 GCTGGTGTGTGGGCGTTTAG 61.852 60.000 0.00 0.00 0.00 1.85
226 227 1.894756 GCTGGTGTGTGGGCGTTTA 60.895 57.895 0.00 0.00 0.00 2.01
227 228 3.216292 GCTGGTGTGTGGGCGTTT 61.216 61.111 0.00 0.00 0.00 3.60
245 246 4.261701 TTTTTCACCACACGGGGG 57.738 55.556 0.00 0.00 43.74 5.40
261 262 1.768112 CGTCGCCCACACGTCTTTTT 61.768 55.000 0.00 0.00 32.41 1.94
262 263 2.241880 CGTCGCCCACACGTCTTTT 61.242 57.895 0.00 0.00 32.41 2.27
263 264 2.660552 CGTCGCCCACACGTCTTT 60.661 61.111 0.00 0.00 32.41 2.52
264 265 4.657824 CCGTCGCCCACACGTCTT 62.658 66.667 0.00 0.00 35.39 3.01
269 270 2.869503 ATTCATCCCGTCGCCCACAC 62.870 60.000 0.00 0.00 0.00 3.82
270 271 2.665089 ATTCATCCCGTCGCCCACA 61.665 57.895 0.00 0.00 0.00 4.17
271 272 2.180204 CATTCATCCCGTCGCCCAC 61.180 63.158 0.00 0.00 0.00 4.61
272 273 2.189257 CATTCATCCCGTCGCCCA 59.811 61.111 0.00 0.00 0.00 5.36
273 274 3.279875 GCATTCATCCCGTCGCCC 61.280 66.667 0.00 0.00 0.00 6.13
274 275 3.279875 GGCATTCATCCCGTCGCC 61.280 66.667 0.00 0.00 0.00 5.54
275 276 3.279875 GGGCATTCATCCCGTCGC 61.280 66.667 0.00 0.00 33.43 5.19
276 277 2.180204 GTGGGCATTCATCCCGTCG 61.180 63.158 0.00 0.00 46.92 5.12
277 278 1.077787 TGTGGGCATTCATCCCGTC 60.078 57.895 0.00 0.00 46.92 4.79
278 279 1.378514 GTGTGGGCATTCATCCCGT 60.379 57.895 0.00 0.00 46.92 5.28
279 280 1.378382 TGTGTGGGCATTCATCCCG 60.378 57.895 0.00 0.00 46.92 5.14
280 281 1.322538 GGTGTGTGGGCATTCATCCC 61.323 60.000 0.00 0.00 44.17 3.85
281 282 0.611618 TGGTGTGTGGGCATTCATCC 60.612 55.000 0.00 0.00 0.00 3.51
282 283 0.813184 CTGGTGTGTGGGCATTCATC 59.187 55.000 0.00 0.00 0.00 2.92
283 284 1.252904 GCTGGTGTGTGGGCATTCAT 61.253 55.000 0.00 0.00 0.00 2.57
284 285 1.902918 GCTGGTGTGTGGGCATTCA 60.903 57.895 0.00 0.00 0.00 2.57
285 286 1.181098 AAGCTGGTGTGTGGGCATTC 61.181 55.000 0.00 0.00 0.00 2.67
286 287 0.112218 TAAGCTGGTGTGTGGGCATT 59.888 50.000 0.00 0.00 0.00 3.56
287 288 0.322816 CTAAGCTGGTGTGTGGGCAT 60.323 55.000 0.00 0.00 0.00 4.40
288 289 1.073025 CTAAGCTGGTGTGTGGGCA 59.927 57.895 0.00 0.00 0.00 5.36
289 290 0.955919 GACTAAGCTGGTGTGTGGGC 60.956 60.000 0.00 0.00 0.00 5.36
290 291 0.321653 GGACTAAGCTGGTGTGTGGG 60.322 60.000 0.00 0.00 0.00 4.61
291 292 0.687354 AGGACTAAGCTGGTGTGTGG 59.313 55.000 0.00 0.00 0.00 4.17
292 293 3.055819 ACATAGGACTAAGCTGGTGTGTG 60.056 47.826 0.00 0.00 0.00 3.82
293 294 3.055819 CACATAGGACTAAGCTGGTGTGT 60.056 47.826 0.00 0.00 33.09 3.72
294 295 3.195610 TCACATAGGACTAAGCTGGTGTG 59.804 47.826 0.00 0.00 37.60 3.82
295 296 3.195825 GTCACATAGGACTAAGCTGGTGT 59.804 47.826 0.00 0.00 34.92 4.16
296 297 3.195610 TGTCACATAGGACTAAGCTGGTG 59.804 47.826 0.00 0.00 38.61 4.17
297 298 3.195825 GTGTCACATAGGACTAAGCTGGT 59.804 47.826 0.00 0.00 38.61 4.00
298 299 3.195610 TGTGTCACATAGGACTAAGCTGG 59.804 47.826 0.18 0.00 38.61 4.85
299 300 4.177026 GTGTGTCACATAGGACTAAGCTG 58.823 47.826 9.31 0.00 38.61 4.24
300 301 3.832490 TGTGTGTCACATAGGACTAAGCT 59.168 43.478 9.31 0.00 39.62 3.74
301 302 4.188247 TGTGTGTCACATAGGACTAAGC 57.812 45.455 9.31 0.00 39.62 3.09
302 303 7.226720 AGTTTTTGTGTGTCACATAGGACTAAG 59.773 37.037 9.31 0.00 44.16 2.18
303 304 7.011950 CAGTTTTTGTGTGTCACATAGGACTAA 59.988 37.037 9.31 0.00 44.16 2.24
304 305 6.481976 CAGTTTTTGTGTGTCACATAGGACTA 59.518 38.462 9.31 0.00 44.16 2.59
305 306 5.296780 CAGTTTTTGTGTGTCACATAGGACT 59.703 40.000 9.31 8.53 44.16 3.85
306 307 5.510671 CAGTTTTTGTGTGTCACATAGGAC 58.489 41.667 9.31 6.53 44.16 3.85
307 308 4.036262 GCAGTTTTTGTGTGTCACATAGGA 59.964 41.667 9.31 0.00 44.16 2.94
308 309 4.036734 AGCAGTTTTTGTGTGTCACATAGG 59.963 41.667 9.31 0.00 44.16 2.57
309 310 5.173774 AGCAGTTTTTGTGTGTCACATAG 57.826 39.130 9.31 0.00 44.16 2.23
310 311 6.052360 TCTAGCAGTTTTTGTGTGTCACATA 58.948 36.000 9.31 3.18 44.16 2.29
311 312 4.881273 TCTAGCAGTTTTTGTGTGTCACAT 59.119 37.500 9.31 0.00 44.16 3.21
312 313 4.257731 TCTAGCAGTTTTTGTGTGTCACA 58.742 39.130 0.18 0.18 43.02 3.58
313 314 4.875544 TCTAGCAGTTTTTGTGTGTCAC 57.124 40.909 0.00 0.00 34.56 3.67
314 315 4.201773 CGTTCTAGCAGTTTTTGTGTGTCA 60.202 41.667 0.00 0.00 0.00 3.58
315 316 4.271687 CGTTCTAGCAGTTTTTGTGTGTC 58.728 43.478 0.00 0.00 0.00 3.67
316 317 3.486875 GCGTTCTAGCAGTTTTTGTGTGT 60.487 43.478 0.00 0.00 37.05 3.72
317 318 3.035942 GCGTTCTAGCAGTTTTTGTGTG 58.964 45.455 0.00 0.00 37.05 3.82
318 319 2.286184 CGCGTTCTAGCAGTTTTTGTGT 60.286 45.455 0.00 0.00 36.85 3.72
319 320 2.298300 CGCGTTCTAGCAGTTTTTGTG 58.702 47.619 0.00 0.00 36.85 3.33
320 321 1.333791 GCGCGTTCTAGCAGTTTTTGT 60.334 47.619 8.43 0.00 36.85 2.83
321 322 1.318251 GCGCGTTCTAGCAGTTTTTG 58.682 50.000 8.43 0.00 36.85 2.44
322 323 0.237498 GGCGCGTTCTAGCAGTTTTT 59.763 50.000 8.43 0.00 36.85 1.94
323 324 0.882927 TGGCGCGTTCTAGCAGTTTT 60.883 50.000 8.43 0.00 36.85 2.43
324 325 0.882927 TTGGCGCGTTCTAGCAGTTT 60.883 50.000 8.43 0.00 36.85 2.66
325 326 1.291877 CTTGGCGCGTTCTAGCAGTT 61.292 55.000 8.43 0.00 36.85 3.16
326 327 1.738099 CTTGGCGCGTTCTAGCAGT 60.738 57.895 8.43 0.00 36.85 4.40
327 328 0.807667 ATCTTGGCGCGTTCTAGCAG 60.808 55.000 8.43 0.00 36.85 4.24
328 329 0.391130 AATCTTGGCGCGTTCTAGCA 60.391 50.000 8.43 0.00 36.85 3.49
329 330 0.301987 GAATCTTGGCGCGTTCTAGC 59.698 55.000 8.43 0.00 0.00 3.42
330 331 0.572590 CGAATCTTGGCGCGTTCTAG 59.427 55.000 8.43 7.32 0.00 2.43
331 332 0.108992 ACGAATCTTGGCGCGTTCTA 60.109 50.000 8.43 0.00 32.42 2.10
332 333 1.374252 ACGAATCTTGGCGCGTTCT 60.374 52.632 8.43 0.00 32.42 3.01
333 334 1.225745 CACGAATCTTGGCGCGTTC 60.226 57.895 8.43 0.81 34.37 3.95
334 335 2.860293 CACGAATCTTGGCGCGTT 59.140 55.556 8.43 0.00 34.37 4.84
335 336 3.788766 GCACGAATCTTGGCGCGT 61.789 61.111 8.43 0.00 37.48 6.01
336 337 1.761244 TATGCACGAATCTTGGCGCG 61.761 55.000 0.00 0.00 0.00 6.86
337 338 0.376852 TTATGCACGAATCTTGGCGC 59.623 50.000 0.00 0.00 0.00 6.53
338 339 3.038017 CAATTATGCACGAATCTTGGCG 58.962 45.455 0.00 0.00 0.00 5.69
339 340 4.291540 TCAATTATGCACGAATCTTGGC 57.708 40.909 0.00 0.00 0.00 4.52
340 341 5.688621 CCAATCAATTATGCACGAATCTTGG 59.311 40.000 0.00 3.56 0.00 3.61
341 342 6.415867 GTCCAATCAATTATGCACGAATCTTG 59.584 38.462 0.00 0.00 0.00 3.02
342 343 6.498304 GTCCAATCAATTATGCACGAATCTT 58.502 36.000 0.00 0.00 0.00 2.40
343 344 5.277490 CGTCCAATCAATTATGCACGAATCT 60.277 40.000 0.00 0.00 0.00 2.40
344 345 4.905866 CGTCCAATCAATTATGCACGAATC 59.094 41.667 0.00 0.00 0.00 2.52
345 346 4.574421 TCGTCCAATCAATTATGCACGAAT 59.426 37.500 0.00 0.00 32.44 3.34
346 347 3.935828 TCGTCCAATCAATTATGCACGAA 59.064 39.130 0.00 0.00 32.44 3.85
347 348 3.526534 TCGTCCAATCAATTATGCACGA 58.473 40.909 0.00 1.44 32.91 4.35
348 349 3.303329 CCTCGTCCAATCAATTATGCACG 60.303 47.826 0.00 0.00 0.00 5.34
349 350 3.876914 TCCTCGTCCAATCAATTATGCAC 59.123 43.478 0.00 0.00 0.00 4.57
350 351 4.149511 TCCTCGTCCAATCAATTATGCA 57.850 40.909 0.00 0.00 0.00 3.96
351 352 4.154918 GGATCCTCGTCCAATCAATTATGC 59.845 45.833 3.84 0.00 38.20 3.14
352 353 5.308014 TGGATCCTCGTCCAATCAATTATG 58.692 41.667 14.23 0.00 45.03 1.90
353 354 5.567037 TGGATCCTCGTCCAATCAATTAT 57.433 39.130 14.23 0.00 45.03 1.28
355 356 3.931907 TGGATCCTCGTCCAATCAATT 57.068 42.857 14.23 0.00 45.03 2.32
363 364 1.592669 CACGCATGGATCCTCGTCC 60.593 63.158 19.28 2.43 38.81 4.79
364 365 1.141881 ACACGCATGGATCCTCGTC 59.858 57.895 19.28 4.59 32.38 4.20
365 366 1.153568 CACACGCATGGATCCTCGT 60.154 57.895 14.23 16.12 35.35 4.18
366 367 1.884464 CCACACGCATGGATCCTCG 60.884 63.158 14.23 15.49 43.02 4.63
367 368 1.524621 CCCACACGCATGGATCCTC 60.525 63.158 14.23 1.21 43.02 3.71
368 369 2.591753 CCCACACGCATGGATCCT 59.408 61.111 14.23 0.00 43.02 3.24
369 370 3.211963 GCCCACACGCATGGATCC 61.212 66.667 4.20 4.20 43.02 3.36
370 371 3.576356 CGCCCACACGCATGGATC 61.576 66.667 7.11 0.00 43.02 3.36
371 372 4.094646 TCGCCCACACGCATGGAT 62.095 61.111 7.11 0.00 43.02 3.41
372 373 4.758251 CTCGCCCACACGCATGGA 62.758 66.667 7.11 0.00 43.02 3.41
374 375 3.049674 AACTCGCCCACACGCATG 61.050 61.111 0.00 0.00 0.00 4.06
375 376 3.049674 CAACTCGCCCACACGCAT 61.050 61.111 0.00 0.00 0.00 4.73
386 387 4.680237 TGGGCGTCTGGCAACTCG 62.680 66.667 0.00 0.00 46.16 4.18
387 388 3.050275 GTGGGCGTCTGGCAACTC 61.050 66.667 0.00 0.00 46.16 3.01
388 389 3.872603 TGTGGGCGTCTGGCAACT 61.873 61.111 0.00 0.00 44.75 3.16
389 390 3.660111 GTGTGGGCGTCTGGCAAC 61.660 66.667 0.00 0.00 46.16 4.17
393 394 4.602259 ACACGTGTGGGCGTCTGG 62.602 66.667 22.71 0.00 43.83 3.86
394 395 3.337889 CACACGTGTGGGCGTCTG 61.338 66.667 35.65 12.14 43.83 3.51
406 407 0.599204 AGAACACTAACGCCCACACG 60.599 55.000 0.00 0.00 39.50 4.49
407 408 1.145803 GAGAACACTAACGCCCACAC 58.854 55.000 0.00 0.00 0.00 3.82
408 409 0.319211 CGAGAACACTAACGCCCACA 60.319 55.000 0.00 0.00 0.00 4.17
409 410 0.038892 TCGAGAACACTAACGCCCAC 60.039 55.000 0.00 0.00 0.00 4.61
410 411 0.675083 TTCGAGAACACTAACGCCCA 59.325 50.000 0.00 0.00 0.00 5.36
411 412 1.787012 TTTCGAGAACACTAACGCCC 58.213 50.000 0.00 0.00 0.00 6.13
412 413 3.865224 TTTTTCGAGAACACTAACGCC 57.135 42.857 0.00 0.00 0.00 5.68
430 431 8.947055 AAAGTAATGCTCACACATTTCTTTTT 57.053 26.923 12.97 0.00 46.55 1.94
455 456 1.025812 CACCTACGTGTGGGCAAAAA 58.974 50.000 12.88 0.00 35.10 1.94
456 457 2.709170 CACCTACGTGTGGGCAAAA 58.291 52.632 12.88 0.00 35.10 2.44
457 458 4.466133 CACCTACGTGTGGGCAAA 57.534 55.556 12.88 0.00 35.10 3.68
465 466 0.387929 ACAGTCCACACACCTACGTG 59.612 55.000 0.00 0.00 46.11 4.49
466 467 1.068127 GAACAGTCCACACACCTACGT 59.932 52.381 0.00 0.00 0.00 3.57
467 468 1.604693 GGAACAGTCCACACACCTACG 60.605 57.143 0.00 0.00 44.26 3.51
468 469 2.165319 GGAACAGTCCACACACCTAC 57.835 55.000 0.00 0.00 44.26 3.18
478 479 4.222145 TGTGGTGTATAAGAGGAACAGTCC 59.778 45.833 0.00 0.00 45.35 3.85
479 480 5.169295 GTGTGGTGTATAAGAGGAACAGTC 58.831 45.833 0.00 0.00 0.00 3.51
480 481 4.591498 TGTGTGGTGTATAAGAGGAACAGT 59.409 41.667 0.00 0.00 0.00 3.55
481 482 5.147330 TGTGTGGTGTATAAGAGGAACAG 57.853 43.478 0.00 0.00 0.00 3.16
482 483 5.554437 TTGTGTGGTGTATAAGAGGAACA 57.446 39.130 0.00 0.00 0.00 3.18
483 484 6.870971 TTTTGTGTGGTGTATAAGAGGAAC 57.129 37.500 0.00 0.00 0.00 3.62
484 485 7.001674 ACATTTTGTGTGGTGTATAAGAGGAA 58.998 34.615 0.00 0.00 40.28 3.36
485 486 6.539173 ACATTTTGTGTGGTGTATAAGAGGA 58.461 36.000 0.00 0.00 40.28 3.71
486 487 6.817765 ACATTTTGTGTGGTGTATAAGAGG 57.182 37.500 0.00 0.00 40.28 3.69
501 502 1.956477 GAGTCTGCCCACACATTTTGT 59.044 47.619 0.00 0.00 39.97 2.83
502 503 1.270550 GGAGTCTGCCCACACATTTTG 59.729 52.381 0.00 0.00 0.00 2.44
503 504 1.620822 GGAGTCTGCCCACACATTTT 58.379 50.000 0.00 0.00 0.00 1.82
504 505 3.346426 GGAGTCTGCCCACACATTT 57.654 52.632 0.00 0.00 0.00 2.32
512 513 1.149401 GGCATTAGGGAGTCTGCCC 59.851 63.158 6.80 3.08 46.76 5.36
513 514 4.887615 GGCATTAGGGAGTCTGCC 57.112 61.111 1.22 1.22 46.54 4.85
514 515 0.464554 GTGGGCATTAGGGAGTCTGC 60.465 60.000 0.00 0.00 0.00 4.26
515 516 0.911769 TGTGGGCATTAGGGAGTCTG 59.088 55.000 0.00 0.00 0.00 3.51
516 517 0.912486 GTGTGGGCATTAGGGAGTCT 59.088 55.000 0.00 0.00 0.00 3.24
517 518 0.462047 CGTGTGGGCATTAGGGAGTC 60.462 60.000 0.00 0.00 0.00 3.36
518 519 1.198759 ACGTGTGGGCATTAGGGAGT 61.199 55.000 0.00 0.00 0.00 3.85
519 520 0.744414 CACGTGTGGGCATTAGGGAG 60.744 60.000 7.58 0.00 0.00 4.30
520 521 1.298340 CACGTGTGGGCATTAGGGA 59.702 57.895 7.58 0.00 0.00 4.20
521 522 1.002624 ACACGTGTGGGCATTAGGG 60.003 57.895 22.71 0.00 34.19 3.53
522 523 0.321210 TCACACGTGTGGGCATTAGG 60.321 55.000 39.88 17.96 45.65 2.69
523 524 0.796312 GTCACACGTGTGGGCATTAG 59.204 55.000 39.88 18.65 45.65 1.73
524 525 0.106894 TGTCACACGTGTGGGCATTA 59.893 50.000 39.88 22.46 45.65 1.90
525 526 1.153066 TGTCACACGTGTGGGCATT 60.153 52.632 39.88 7.83 45.65 3.56
526 527 1.891919 GTGTCACACGTGTGGGCAT 60.892 57.895 39.88 8.62 45.65 4.40
527 528 2.512745 GTGTCACACGTGTGGGCA 60.513 61.111 39.88 33.99 45.65 5.36
528 529 0.531090 TAAGTGTCACACGTGTGGGC 60.531 55.000 39.88 32.25 45.65 5.36
529 530 2.066262 GATAAGTGTCACACGTGTGGG 58.934 52.381 39.88 22.15 45.65 4.61
530 531 1.719246 CGATAAGTGTCACACGTGTGG 59.281 52.381 39.88 25.18 45.65 4.17
531 532 2.404029 GTCGATAAGTGTCACACGTGTG 59.596 50.000 37.04 37.04 46.91 3.82
532 533 2.658285 GTCGATAAGTGTCACACGTGT 58.342 47.619 17.22 17.22 39.64 4.49
533 534 1.642360 CGTCGATAAGTGTCACACGTG 59.358 52.381 15.48 15.48 39.64 4.49
534 535 1.265095 ACGTCGATAAGTGTCACACGT 59.735 47.619 10.18 10.18 39.64 4.49
535 536 1.903139 GACGTCGATAAGTGTCACACG 59.097 52.381 1.22 7.66 39.64 4.49
536 537 2.095364 AGGACGTCGATAAGTGTCACAC 60.095 50.000 9.92 0.00 33.04 3.82
537 538 2.156917 AGGACGTCGATAAGTGTCACA 58.843 47.619 9.92 0.00 33.04 3.58
538 539 2.915738 AGGACGTCGATAAGTGTCAC 57.084 50.000 9.92 0.00 33.04 3.67
539 540 3.337358 TGTAGGACGTCGATAAGTGTCA 58.663 45.455 9.92 0.00 33.04 3.58
540 541 4.346734 TTGTAGGACGTCGATAAGTGTC 57.653 45.455 9.92 0.00 0.00 3.67
541 542 4.978083 ATTGTAGGACGTCGATAAGTGT 57.022 40.909 9.92 0.00 0.00 3.55
542 543 6.466812 CAAAATTGTAGGACGTCGATAAGTG 58.533 40.000 9.92 1.96 0.00 3.16
543 544 5.063060 GCAAAATTGTAGGACGTCGATAAGT 59.937 40.000 9.92 1.20 0.00 2.24
544 545 5.062934 TGCAAAATTGTAGGACGTCGATAAG 59.937 40.000 9.92 0.00 0.00 1.73
545 546 4.930405 TGCAAAATTGTAGGACGTCGATAA 59.070 37.500 9.92 5.15 0.00 1.75
546 547 4.496360 TGCAAAATTGTAGGACGTCGATA 58.504 39.130 9.92 2.04 0.00 2.92
547 548 3.331150 TGCAAAATTGTAGGACGTCGAT 58.669 40.909 9.92 3.12 0.00 3.59
548 549 2.756829 TGCAAAATTGTAGGACGTCGA 58.243 42.857 9.92 0.00 0.00 4.20
549 550 3.416277 CATGCAAAATTGTAGGACGTCG 58.584 45.455 9.92 0.00 0.00 5.12
550 551 3.190535 ACCATGCAAAATTGTAGGACGTC 59.809 43.478 7.13 7.13 0.00 4.34
556 557 7.591057 CGGACATAATACCATGCAAAATTGTAG 59.409 37.037 0.00 0.00 0.00 2.74
568 569 7.668469 TCTGACATAGTACGGACATAATACCAT 59.332 37.037 0.00 0.00 0.00 3.55
580 581 8.873215 ATAAGACATTTTCTGACATAGTACGG 57.127 34.615 0.00 0.00 33.46 4.02
597 598 8.211030 TCCATCCATCACTTGATATAAGACAT 57.789 34.615 0.00 0.00 32.63 3.06
598 599 7.290948 ACTCCATCCATCACTTGATATAAGACA 59.709 37.037 0.00 0.00 32.63 3.41
601 602 7.605691 GGAACTCCATCCATCACTTGATATAAG 59.394 40.741 0.00 0.00 39.42 1.73
608 609 3.641434 AGGAACTCCATCCATCACTTG 57.359 47.619 0.00 0.00 42.27 3.16
639 640 9.003112 CAAAATTCTGATGTAGACATTTTAGCG 57.997 33.333 0.00 0.00 35.88 4.26
641 642 9.294030 GGCAAAATTCTGATGTAGACATTTTAG 57.706 33.333 0.00 0.00 35.88 1.85
702 718 8.073768 GTCGATTTTATTGTTCAACAAAGGAGA 58.926 33.333 7.14 0.00 41.96 3.71
706 722 8.560576 AGTGTCGATTTTATTGTTCAACAAAG 57.439 30.769 7.14 0.00 41.96 2.77
713 729 4.390909 ACGGGAGTGTCGATTTTATTGTTC 59.609 41.667 0.00 0.00 44.82 3.18
725 750 4.928601 TCATTTCTATAACGGGAGTGTCG 58.071 43.478 0.00 0.00 46.69 4.35
728 753 7.516785 CGTCATTTCATTTCTATAACGGGAGTG 60.517 40.741 0.00 0.00 46.69 3.51
752 777 5.452078 TTCCTGCAAATTTCTGAAATCGT 57.548 34.783 15.43 5.00 0.00 3.73
753 778 5.922544 ACTTTCCTGCAAATTTCTGAAATCG 59.077 36.000 15.43 11.05 0.00 3.34
779 804 3.924686 CGTCATGTTAGGTTCGCTAAAGT 59.075 43.478 0.00 0.00 0.00 2.66
825 850 3.319137 TCGTCCATCCAAAACTCTCTG 57.681 47.619 0.00 0.00 0.00 3.35
864 889 8.748412 AGCAGTGAGATGTATAATTATCTCTCC 58.252 37.037 19.67 14.50 45.99 3.71
874 899 8.531982 ACAGTTTCTAAGCAGTGAGATGTATAA 58.468 33.333 0.00 0.00 0.00 0.98
875 900 8.067751 ACAGTTTCTAAGCAGTGAGATGTATA 57.932 34.615 0.00 0.00 0.00 1.47
876 901 6.940739 ACAGTTTCTAAGCAGTGAGATGTAT 58.059 36.000 0.00 0.00 0.00 2.29
955 1011 2.776913 CCTCTCGTCTCCTTCGGCC 61.777 68.421 0.00 0.00 0.00 6.13
957 1013 1.720694 GCTCCTCTCGTCTCCTTCGG 61.721 65.000 0.00 0.00 0.00 4.30
961 1017 1.077068 CCTGCTCCTCTCGTCTCCT 60.077 63.158 0.00 0.00 0.00 3.69
962 1018 2.124693 CCCTGCTCCTCTCGTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
963 1019 2.124693 CCCCTGCTCCTCTCGTCTC 61.125 68.421 0.00 0.00 0.00 3.36
964 1020 2.043450 CCCCTGCTCCTCTCGTCT 60.043 66.667 0.00 0.00 0.00 4.18
965 1021 3.151022 CCCCCTGCTCCTCTCGTC 61.151 72.222 0.00 0.00 0.00 4.20
979 1035 3.400054 CTCCGTTCTCCCACCCCC 61.400 72.222 0.00 0.00 0.00 5.40
980 1036 3.400054 CCTCCGTTCTCCCACCCC 61.400 72.222 0.00 0.00 0.00 4.95
981 1037 2.284405 TCCTCCGTTCTCCCACCC 60.284 66.667 0.00 0.00 0.00 4.61
982 1038 0.688087 ATCTCCTCCGTTCTCCCACC 60.688 60.000 0.00 0.00 0.00 4.61
983 1039 0.461961 CATCTCCTCCGTTCTCCCAC 59.538 60.000 0.00 0.00 0.00 4.61
984 1040 1.330655 GCATCTCCTCCGTTCTCCCA 61.331 60.000 0.00 0.00 0.00 4.37
985 1041 1.443828 GCATCTCCTCCGTTCTCCC 59.556 63.158 0.00 0.00 0.00 4.30
986 1042 1.443828 GGCATCTCCTCCGTTCTCC 59.556 63.158 0.00 0.00 0.00 3.71
987 1043 1.066587 CGGCATCTCCTCCGTTCTC 59.933 63.158 0.00 0.00 40.72 2.87
988 1044 3.082579 GCGGCATCTCCTCCGTTCT 62.083 63.158 0.00 0.00 46.79 3.01
989 1045 2.586357 GCGGCATCTCCTCCGTTC 60.586 66.667 0.00 0.00 46.79 3.95
990 1046 3.077556 AGCGGCATCTCCTCCGTT 61.078 61.111 1.45 0.00 46.79 4.44
991 1047 3.842923 CAGCGGCATCTCCTCCGT 61.843 66.667 1.45 0.00 46.79 4.69
993 1049 4.247380 CCCAGCGGCATCTCCTCC 62.247 72.222 1.45 0.00 0.00 4.30
1149 1205 3.695825 GGAGGAGGGAGGGGGACA 61.696 72.222 0.00 0.00 0.00 4.02
1150 1206 3.695825 TGGAGGAGGGAGGGGGAC 61.696 72.222 0.00 0.00 0.00 4.46
1151 1207 3.368501 CTGGAGGAGGGAGGGGGA 61.369 72.222 0.00 0.00 0.00 4.81
1152 1208 4.505970 CCTGGAGGAGGGAGGGGG 62.506 77.778 0.00 0.00 38.36 5.40
1207 1263 1.909986 AGGTAAAGGTCAAGAGGAGGC 59.090 52.381 0.00 0.00 0.00 4.70
1210 1266 4.287845 GGGTTTAGGTAAAGGTCAAGAGGA 59.712 45.833 0.00 0.00 0.00 3.71
1211 1267 4.586884 GGGTTTAGGTAAAGGTCAAGAGG 58.413 47.826 0.00 0.00 0.00 3.69
1212 1268 4.251268 CGGGTTTAGGTAAAGGTCAAGAG 58.749 47.826 0.00 0.00 0.00 2.85
1221 1277 4.559153 CGAAGAAGACGGGTTTAGGTAAA 58.441 43.478 0.00 0.00 0.00 2.01
1223 1279 2.493278 CCGAAGAAGACGGGTTTAGGTA 59.507 50.000 0.00 0.00 45.65 3.08
1252 1309 4.451150 GGAGATGCGCCACCGTGA 62.451 66.667 4.18 0.00 36.67 4.35
1341 1398 6.869388 GGTAGGAATTAAGAAGCGATAAGGAG 59.131 42.308 0.00 0.00 0.00 3.69
1427 1489 6.149973 TGAACAATTGACCTCAGATTCATCAC 59.850 38.462 13.59 0.00 0.00 3.06
1495 1559 7.692460 AACATCATCAATCAAGAAGCTAACA 57.308 32.000 0.00 0.00 0.00 2.41
1598 1669 4.884668 TCTGAAAGTAAACTGACCGGAT 57.115 40.909 9.46 0.00 33.76 4.18
1601 1672 4.627467 CAGGATCTGAAAGTAAACTGACCG 59.373 45.833 0.00 0.00 32.44 4.79
1621 1692 2.457598 TGCTAGGAGTACCAGAACAGG 58.542 52.381 0.00 0.00 38.94 4.00
1624 1695 2.103263 CCCATGCTAGGAGTACCAGAAC 59.897 54.545 0.00 0.00 38.94 3.01
1702 1784 6.340522 AGTTTAGCATTGTGAAGCAAGTTTT 58.659 32.000 0.00 0.00 40.86 2.43
1733 1815 1.004440 AACCCAAGCTGACTCGCTC 60.004 57.895 0.00 0.00 39.86 5.03
1756 1838 8.747538 AACAAAAGTCTAAACAACTATCCACT 57.252 30.769 0.00 0.00 0.00 4.00
1769 1851 6.376018 AGTGTAGCAACCAAACAAAAGTCTAA 59.624 34.615 0.00 0.00 0.00 2.10
1797 1879 3.243877 CGGAATACTGCTTGAATCTCACG 59.756 47.826 0.00 0.00 0.00 4.35
1897 1980 8.210946 TCTATGGGAAAATGAATACTGGTACTG 58.789 37.037 0.00 0.00 0.00 2.74
1903 1986 8.616076 GTGAACTCTATGGGAAAATGAATACTG 58.384 37.037 0.00 0.00 0.00 2.74
2163 2253 2.419324 GGCAAGAGTCTCATGCAAGAAG 59.581 50.000 26.47 0.00 42.31 2.85
2256 2347 5.944135 TGAGGCATGGAAAATATGATGAGA 58.056 37.500 0.00 0.00 0.00 3.27
2284 2375 3.343941 TGGGTTCTATCCAGAAAACGG 57.656 47.619 0.00 0.00 42.41 4.44
2286 2377 3.381590 GCCATGGGTTCTATCCAGAAAAC 59.618 47.826 15.13 0.00 42.41 2.43
2312 2403 9.416058 CATGCAAATGATTAAATTCAACGATTG 57.584 29.630 0.00 0.00 0.00 2.67
2344 2435 2.158475 AGGAACTGAGGCAAATGGACAA 60.158 45.455 0.00 0.00 37.18 3.18
2345 2436 1.425066 AGGAACTGAGGCAAATGGACA 59.575 47.619 0.00 0.00 37.18 4.02
2367 2459 8.718656 ACCTCTAAATAGAACCTAATTGCTGAT 58.281 33.333 0.00 0.00 0.00 2.90
2369 2461 8.738645 AACCTCTAAATAGAACCTAATTGCTG 57.261 34.615 0.00 0.00 0.00 4.41
2372 2464 9.681062 TCCAAACCTCTAAATAGAACCTAATTG 57.319 33.333 0.00 0.00 0.00 2.32
2391 2483 0.966179 AACCGAATTGCCTCCAAACC 59.034 50.000 0.00 0.00 34.05 3.27
2408 2500 4.043200 GGCGGACCTGCTTGCAAC 62.043 66.667 0.00 0.00 34.52 4.17
2439 2531 9.396022 ACTTTAATATGTAGTCCAAGTCCATTG 57.604 33.333 0.00 0.00 38.74 2.82
2447 2539 6.953101 TCAGGCACTTTAATATGTAGTCCAA 58.047 36.000 0.00 0.00 34.60 3.53
2448 2540 6.382859 TCTCAGGCACTTTAATATGTAGTCCA 59.617 38.462 0.00 0.00 34.60 4.02
2449 2541 6.817184 TCTCAGGCACTTTAATATGTAGTCC 58.183 40.000 0.00 0.00 34.60 3.85
2450 2542 8.718102 TTTCTCAGGCACTTTAATATGTAGTC 57.282 34.615 0.00 0.00 34.60 2.59
2451 2543 9.113838 CATTTCTCAGGCACTTTAATATGTAGT 57.886 33.333 0.00 0.00 34.60 2.73
2452 2544 9.113838 ACATTTCTCAGGCACTTTAATATGTAG 57.886 33.333 0.00 0.00 34.60 2.74
2468 2560 9.630098 AAATTGTTATTGTAGCACATTTCTCAG 57.370 29.630 0.00 0.00 0.00 3.35
2470 2562 9.410556 ACAAATTGTTATTGTAGCACATTTCTC 57.589 29.630 0.00 0.00 39.14 2.87
2532 2626 6.177610 AGAATCAAAATGCATTGCTTTGGAT 58.822 32.000 13.82 15.56 32.17 3.41
2545 2639 7.869429 ACAGTTGCCTTTCTAAGAATCAAAATG 59.131 33.333 0.00 0.00 0.00 2.32
2554 2648 5.298989 TGGTAACAGTTGCCTTTCTAAGA 57.701 39.130 20.00 0.00 46.17 2.10
2570 2664 8.515695 AACATTTATTAAGCTACCCTGGTAAC 57.484 34.615 0.00 0.00 0.00 2.50
2616 2710 3.181493 CCTGCATTTTCTTCCTGGATTCG 60.181 47.826 0.00 0.00 0.00 3.34
2635 2729 5.046663 ACCATAACAATTTAAGCCAACCCTG 60.047 40.000 0.00 0.00 0.00 4.45
2641 2735 8.301002 GTTTAGTCACCATAACAATTTAAGCCA 58.699 33.333 0.00 0.00 0.00 4.75
2717 2816 9.534565 GTTGCTTCTCTAGTATTGATGTATTGA 57.465 33.333 0.00 0.00 0.00 2.57
2767 2866 7.554118 ACAATAGCAGTACTAAGCAACAATGAT 59.446 33.333 7.83 0.00 33.57 2.45
2781 2890 3.518590 AGGCGTTGTACAATAGCAGTAC 58.481 45.455 28.13 17.01 41.63 2.73
2785 2894 3.328382 AGAAGGCGTTGTACAATAGCA 57.672 42.857 28.13 1.26 0.00 3.49
2842 3080 4.439289 GCTAATTTGGACAGATGACTTGCC 60.439 45.833 0.00 0.00 0.00 4.52
2871 3109 4.214545 TGACGATGGTGTGTTGGAATAAAC 59.785 41.667 0.00 0.00 0.00 2.01
2917 3157 8.890718 GTTTGTTCTAGTAGGTCTTTGTTTTCT 58.109 33.333 0.00 0.00 0.00 2.52
2918 3158 8.671028 TGTTTGTTCTAGTAGGTCTTTGTTTTC 58.329 33.333 0.00 0.00 0.00 2.29
2919 3159 8.570068 TGTTTGTTCTAGTAGGTCTTTGTTTT 57.430 30.769 0.00 0.00 0.00 2.43
2921 3161 8.570068 TTTGTTTGTTCTAGTAGGTCTTTGTT 57.430 30.769 0.00 0.00 0.00 2.83
3201 3462 1.615424 GCCTAGGGTTCCCTCCACA 60.615 63.158 14.24 0.00 37.64 4.17
3220 3481 1.079336 GTCGTCCCCAACTACCAGC 60.079 63.158 0.00 0.00 0.00 4.85
3240 3501 2.811431 TCCCTTAATTGTTGTGAGCACG 59.189 45.455 0.00 0.00 0.00 5.34
3311 3572 2.162408 GGCCACAAGCAGTTCAGTTATC 59.838 50.000 0.00 0.00 46.50 1.75
3330 3591 5.399013 ACGAGTATGCAATTTTTACAAGGC 58.601 37.500 0.00 0.00 0.00 4.35
3331 3592 7.748847 AGTACGAGTATGCAATTTTTACAAGG 58.251 34.615 0.00 0.00 0.00 3.61
3332 3593 8.656849 AGAGTACGAGTATGCAATTTTTACAAG 58.343 33.333 0.00 0.00 0.00 3.16
3333 3594 8.542497 AGAGTACGAGTATGCAATTTTTACAA 57.458 30.769 0.00 0.00 0.00 2.41
3334 3595 8.542497 AAGAGTACGAGTATGCAATTTTTACA 57.458 30.769 0.00 0.00 0.00 2.41
3335 3596 9.474249 GAAAGAGTACGAGTATGCAATTTTTAC 57.526 33.333 0.00 0.00 0.00 2.01
3340 3601 6.868622 AGAGAAAGAGTACGAGTATGCAATT 58.131 36.000 0.00 0.00 0.00 2.32
3341 3602 6.458232 AGAGAAAGAGTACGAGTATGCAAT 57.542 37.500 0.00 0.00 0.00 3.56
3342 3603 5.899120 AGAGAAAGAGTACGAGTATGCAA 57.101 39.130 0.00 0.00 0.00 4.08
3348 3609 7.711339 ACAAAAATGAAGAGAAAGAGTACGAGT 59.289 33.333 0.00 0.00 0.00 4.18
3397 3660 0.957395 ATTTGCTCGCAGTCCCACAG 60.957 55.000 0.00 0.00 0.00 3.66
3400 3663 1.327303 AAAATTTGCTCGCAGTCCCA 58.673 45.000 0.00 0.00 0.00 4.37
3453 3976 6.037726 GCTAAGCCAGTAAACTCTAAGTCTC 58.962 44.000 0.00 0.00 0.00 3.36
3459 3982 6.049955 ACATTGCTAAGCCAGTAAACTCTA 57.950 37.500 0.00 0.00 32.19 2.43
3461 3984 6.737254 TTACATTGCTAAGCCAGTAAACTC 57.263 37.500 0.00 0.00 32.19 3.01
3471 3994 9.265901 TCTAATTCTCAGATTACATTGCTAAGC 57.734 33.333 0.00 0.00 0.00 3.09
3533 4056 0.393537 GCTACACAGCCAGAAGCCAT 60.394 55.000 0.00 0.00 45.47 4.40
3539 4062 3.390521 CCCCGCTACACAGCCAGA 61.391 66.667 0.00 0.00 45.64 3.86
3542 4065 3.995506 AATGCCCCGCTACACAGCC 62.996 63.158 0.00 0.00 45.64 4.85
3544 4067 1.377202 ACAATGCCCCGCTACACAG 60.377 57.895 0.00 0.00 0.00 3.66
3545 4068 1.673993 CACAATGCCCCGCTACACA 60.674 57.895 0.00 0.00 0.00 3.72
3546 4069 3.051392 GCACAATGCCCCGCTACAC 62.051 63.158 0.00 0.00 37.42 2.90
3547 4070 2.749839 GCACAATGCCCCGCTACA 60.750 61.111 0.00 0.00 37.42 2.74
3548 4071 2.046285 AAGCACAATGCCCCGCTAC 61.046 57.895 0.00 0.00 46.52 3.58
3549 4072 2.045708 CAAGCACAATGCCCCGCTA 61.046 57.895 0.00 0.00 46.52 4.26
3550 4073 3.376078 CAAGCACAATGCCCCGCT 61.376 61.111 0.00 0.00 46.52 5.52
3551 4074 3.683937 ACAAGCACAATGCCCCGC 61.684 61.111 0.00 0.00 46.52 6.13
3552 4075 2.259204 CACAAGCACAATGCCCCG 59.741 61.111 0.00 0.00 46.52 5.73
3553 4076 2.047939 GCACAAGCACAATGCCCC 60.048 61.111 0.00 0.00 46.52 5.80
3555 4078 2.017783 CACGCACAAGCACAATGCC 61.018 57.895 0.00 0.00 46.52 4.40
3556 4079 1.299316 ACACGCACAAGCACAATGC 60.299 52.632 0.00 0.00 45.46 3.56
3557 4080 0.029167 TCACACGCACAAGCACAATG 59.971 50.000 0.00 0.00 42.27 2.82
3558 4081 0.737804 TTCACACGCACAAGCACAAT 59.262 45.000 0.00 0.00 42.27 2.71
3559 4082 0.098552 CTTCACACGCACAAGCACAA 59.901 50.000 0.00 0.00 42.27 3.33
3609 4138 4.566488 GCCCATTCACCATATAGAAGAGGG 60.566 50.000 14.39 14.39 41.92 4.30
3646 4175 2.514803 GGTGAAGCAGCCCTAGAAAAA 58.485 47.619 0.00 0.00 0.00 1.94
3647 4176 1.271926 GGGTGAAGCAGCCCTAGAAAA 60.272 52.381 4.36 0.00 45.22 2.29
3649 4178 1.991230 GGGTGAAGCAGCCCTAGAA 59.009 57.895 4.36 0.00 45.22 2.10
3650 4179 3.727387 GGGTGAAGCAGCCCTAGA 58.273 61.111 4.36 0.00 45.22 2.43
3659 4188 3.220940 ACTATAGTACTCCGGGTGAAGC 58.779 50.000 2.75 0.00 0.00 3.86
3660 4189 8.804912 ATATTACTATAGTACTCCGGGTGAAG 57.195 38.462 12.25 0.00 0.00 3.02
3661 4190 9.592196 AAATATTACTATAGTACTCCGGGTGAA 57.408 33.333 12.25 0.00 0.00 3.18
3662 4191 9.592196 AAAATATTACTATAGTACTCCGGGTGA 57.408 33.333 12.25 0.00 0.00 4.02
3686 4215 3.304829 AGCCTGCCCTAGAAAACAAAAA 58.695 40.909 0.00 0.00 0.00 1.94
3687 4216 2.890945 GAGCCTGCCCTAGAAAACAAAA 59.109 45.455 0.00 0.00 0.00 2.44
3688 4217 2.514803 GAGCCTGCCCTAGAAAACAAA 58.485 47.619 0.00 0.00 0.00 2.83
3689 4218 1.610624 CGAGCCTGCCCTAGAAAACAA 60.611 52.381 0.00 0.00 0.00 2.83
3726 4257 1.300620 CAACGGCGAGTCCAACAGA 60.301 57.895 16.62 0.00 34.01 3.41
3775 4306 2.166907 ATGTAGTCAGGCCAGTAGCT 57.833 50.000 5.01 0.00 43.05 3.32
3776 4307 2.990066 AATGTAGTCAGGCCAGTAGC 57.010 50.000 5.01 0.00 42.60 3.58
3777 4308 7.225538 CAGAAATAAATGTAGTCAGGCCAGTAG 59.774 40.741 5.01 0.00 0.00 2.57
3779 4310 5.882557 CAGAAATAAATGTAGTCAGGCCAGT 59.117 40.000 5.01 0.00 0.00 4.00
3780 4311 5.882557 ACAGAAATAAATGTAGTCAGGCCAG 59.117 40.000 5.01 0.00 0.00 4.85
3781 4312 5.815581 ACAGAAATAAATGTAGTCAGGCCA 58.184 37.500 5.01 0.00 0.00 5.36
3782 4313 5.880332 TGACAGAAATAAATGTAGTCAGGCC 59.120 40.000 0.00 0.00 31.63 5.19
3783 4314 6.371548 TGTGACAGAAATAAATGTAGTCAGGC 59.628 38.462 0.00 0.00 35.48 4.85
3784 4315 7.905604 TGTGACAGAAATAAATGTAGTCAGG 57.094 36.000 0.00 0.00 35.48 3.86
3793 4324 7.451255 TCCCTGTGAATTGTGACAGAAATAAAT 59.549 33.333 9.45 0.00 41.90 1.40
3863 4394 4.974438 TCCGGGGGAGGTTGCAGT 62.974 66.667 0.00 0.00 0.00 4.40
3878 4409 1.749033 CGGAGGATAGCCACCTTCC 59.251 63.158 11.90 2.41 42.25 3.46
3921 4452 5.868454 TCAACATTTCAGAGAGGTGATGAA 58.132 37.500 0.00 0.00 0.00 2.57
3923 4454 5.878669 TGATCAACATTTCAGAGAGGTGATG 59.121 40.000 0.00 0.00 0.00 3.07
3924 4455 5.879223 GTGATCAACATTTCAGAGAGGTGAT 59.121 40.000 0.00 0.00 0.00 3.06
3931 4462 7.466996 GCATCCTAAGTGATCAACATTTCAGAG 60.467 40.741 0.00 0.00 31.22 3.35
3948 4479 5.639506 CCGGTCAAATATACAGCATCCTAAG 59.360 44.000 0.00 0.00 0.00 2.18
3951 4482 3.391296 ACCGGTCAAATATACAGCATCCT 59.609 43.478 0.00 0.00 0.00 3.24
4000 4531 2.878406 GGAAGCAAGCACTTGTTACTGA 59.122 45.455 11.77 0.00 42.31 3.41
4003 4534 2.618709 ACAGGAAGCAAGCACTTGTTAC 59.381 45.455 11.77 6.15 42.31 2.50
4015 4546 7.342026 TGAAACTCTATCTGTATACAGGAAGCA 59.658 37.037 28.33 12.50 43.91 3.91
4016 4547 7.717568 TGAAACTCTATCTGTATACAGGAAGC 58.282 38.462 28.33 14.39 43.91 3.86
4017 4548 9.906660 GATGAAACTCTATCTGTATACAGGAAG 57.093 37.037 28.33 23.97 43.91 3.46
4018 4549 9.421399 TGATGAAACTCTATCTGTATACAGGAA 57.579 33.333 28.33 17.31 43.91 3.36
4019 4550 8.996651 TGATGAAACTCTATCTGTATACAGGA 57.003 34.615 28.33 18.21 43.91 3.86
4027 4558 9.950496 ACTTGTTATTGATGAAACTCTATCTGT 57.050 29.630 0.00 0.00 0.00 3.41
4029 4560 8.887717 GCACTTGTTATTGATGAAACTCTATCT 58.112 33.333 0.00 0.00 0.00 1.98
4030 4561 8.887717 AGCACTTGTTATTGATGAAACTCTATC 58.112 33.333 0.00 0.00 0.00 2.08
4031 4562 8.798859 AGCACTTGTTATTGATGAAACTCTAT 57.201 30.769 0.00 0.00 0.00 1.98
4032 4563 8.506437 CAAGCACTTGTTATTGATGAAACTCTA 58.494 33.333 2.12 0.00 35.92 2.43
4033 4564 7.365741 CAAGCACTTGTTATTGATGAAACTCT 58.634 34.615 2.12 0.00 35.92 3.24
4034 4565 6.088616 GCAAGCACTTGTTATTGATGAAACTC 59.911 38.462 11.77 0.00 42.31 3.01
4035 4566 5.922544 GCAAGCACTTGTTATTGATGAAACT 59.077 36.000 11.77 0.00 42.31 2.66
4036 4567 5.922544 AGCAAGCACTTGTTATTGATGAAAC 59.077 36.000 11.77 0.00 42.31 2.78
4037 4568 6.088016 AGCAAGCACTTGTTATTGATGAAA 57.912 33.333 11.77 0.00 42.31 2.69
4038 4569 5.710513 AGCAAGCACTTGTTATTGATGAA 57.289 34.783 11.77 0.00 42.31 2.57
4039 4570 5.335897 GGAAGCAAGCACTTGTTATTGATGA 60.336 40.000 11.77 0.00 42.31 2.92
4040 4571 4.860907 GGAAGCAAGCACTTGTTATTGATG 59.139 41.667 11.77 0.00 42.31 3.07
4041 4572 4.768968 AGGAAGCAAGCACTTGTTATTGAT 59.231 37.500 11.77 0.00 42.31 2.57
4042 4573 4.022935 CAGGAAGCAAGCACTTGTTATTGA 60.023 41.667 11.77 0.00 42.31 2.57
4043 4574 4.232221 CAGGAAGCAAGCACTTGTTATTG 58.768 43.478 11.77 2.70 42.31 1.90
4044 4575 3.891366 ACAGGAAGCAAGCACTTGTTATT 59.109 39.130 11.77 5.11 42.31 1.40
4045 4576 3.490348 ACAGGAAGCAAGCACTTGTTAT 58.510 40.909 11.77 0.00 42.31 1.89
4046 4577 2.930950 ACAGGAAGCAAGCACTTGTTA 58.069 42.857 11.77 0.00 42.31 2.41
4047 4578 1.767759 ACAGGAAGCAAGCACTTGTT 58.232 45.000 11.77 3.09 42.31 2.83
4048 4579 2.638480 TACAGGAAGCAAGCACTTGT 57.362 45.000 11.77 10.41 42.31 3.16
4049 4580 4.002982 TGTATACAGGAAGCAAGCACTTG 58.997 43.478 0.08 6.01 43.14 3.16
4050 4581 4.020218 TCTGTATACAGGAAGCAAGCACTT 60.020 41.667 28.33 0.00 43.91 3.16
4051 4582 3.515502 TCTGTATACAGGAAGCAAGCACT 59.484 43.478 28.33 0.00 43.91 4.40
4052 4583 3.861840 TCTGTATACAGGAAGCAAGCAC 58.138 45.455 28.33 0.00 43.91 4.40
4053 4584 4.760530 ATCTGTATACAGGAAGCAAGCA 57.239 40.909 28.33 9.81 43.91 3.91
4054 4585 6.090483 TCTATCTGTATACAGGAAGCAAGC 57.910 41.667 28.33 0.00 43.91 4.01
4055 4586 7.283625 ACTCTATCTGTATACAGGAAGCAAG 57.716 40.000 28.33 20.38 43.91 4.01
4056 4587 7.661536 AACTCTATCTGTATACAGGAAGCAA 57.338 36.000 28.33 11.83 43.91 3.91
4126 4657 3.387374 TGTTGGTTGATTTCTTGCATGGT 59.613 39.130 0.00 0.00 0.00 3.55
4169 4700 5.251468 TCATGCCTACATTGCCTAGGATAAT 59.749 40.000 14.75 9.41 33.65 1.28
4191 4722 3.869912 GCTCTGCCTTCCAATGTAGTTCA 60.870 47.826 0.00 0.00 0.00 3.18
4473 5004 2.020131 CTGCAAGCCATCATCCGTC 58.980 57.895 0.00 0.00 0.00 4.79
4543 5074 6.150976 TGTTGCTACCATCATTCCAAAGTAAG 59.849 38.462 0.00 0.00 0.00 2.34
4577 5108 4.153411 GGCTCACTATATGTACCTGAGGT 58.847 47.826 10.00 10.00 40.16 3.85
4681 5216 3.584406 TCGAGCAGAAGAGGAAAAGAG 57.416 47.619 0.00 0.00 0.00 2.85
4697 5232 7.598118 ACATATCATAAGCTTTCTGTGATCGAG 59.402 37.037 3.20 6.45 33.37 4.04
4792 5337 2.680339 GGGTGAAGAGAATTAGCAGTGC 59.320 50.000 7.13 7.13 0.00 4.40
4793 5338 3.937706 CAGGGTGAAGAGAATTAGCAGTG 59.062 47.826 0.00 0.00 0.00 3.66
4848 5395 4.457466 TCTTCCTTTTCGCACCTAAAAGT 58.543 39.130 0.00 0.00 40.67 2.66
4883 5431 4.319177 AGAAGAATCTGCACACAAGGTAC 58.681 43.478 0.00 0.00 33.59 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.