Multiple sequence alignment - TraesCS3D01G175400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G175400 chr3D 100.000 2363 0 0 1 2363 157215434 157217796 0.000000e+00 4364.0
1 TraesCS3D01G175400 chr3D 96.970 165 4 1 2010 2174 592339437 592339274 2.310000e-70 276.0
2 TraesCS3D01G175400 chr3B 86.395 588 40 17 1461 2011 228425057 228425641 7.220000e-170 606.0
3 TraesCS3D01G175400 chr3B 84.286 560 47 28 3 532 228393195 228393743 2.100000e-140 508.0
4 TraesCS3D01G175400 chr3B 92.571 350 21 4 1136 1482 228424007 228424354 4.540000e-137 497.0
5 TraesCS3D01G175400 chr3B 83.514 552 69 20 504 1051 228393616 228394149 1.630000e-136 496.0
6 TraesCS3D01G175400 chr3B 88.393 112 8 4 1906 2014 413994131 413994240 1.910000e-26 130.0
7 TraesCS3D01G175400 chr3B 86.667 60 4 3 459 516 484874483 484874426 1.960000e-06 63.9
8 TraesCS3D01G175400 chr7D 96.954 197 4 2 2168 2363 112498545 112498350 1.750000e-86 329.0
9 TraesCS3D01G175400 chr7D 96.939 196 5 1 2168 2363 596822667 596822473 6.300000e-86 327.0
10 TraesCS3D01G175400 chr7D 98.125 160 3 0 2015 2174 79378509 79378668 1.790000e-71 279.0
11 TraesCS3D01G175400 chr7D 98.125 160 3 0 2015 2174 611065763 611065604 1.790000e-71 279.0
12 TraesCS3D01G175400 chr7D 98.125 160 3 0 2015 2174 633772192 633772351 1.790000e-71 279.0
13 TraesCS3D01G175400 chr7D 94.382 178 7 3 1999 2174 3983932 3983756 1.080000e-68 270.0
14 TraesCS3D01G175400 chr7D 82.955 88 13 2 1732 1817 510302450 510302537 7.000000e-11 78.7
15 TraesCS3D01G175400 chr5D 96.954 197 4 2 2168 2363 515559661 515559466 1.750000e-86 329.0
16 TraesCS3D01G175400 chr5D 96.951 164 5 0 2011 2174 448472114 448471951 2.310000e-70 276.0
17 TraesCS3D01G175400 chr5D 96.407 167 5 1 2009 2174 349664147 349664313 8.320000e-70 274.0
18 TraesCS3D01G175400 chr5D 90.833 120 5 5 1898 2014 537391478 537391362 3.140000e-34 156.0
19 TraesCS3D01G175400 chrUn 96.447 197 5 2 2168 2363 97649663 97649468 8.150000e-85 324.0
20 TraesCS3D01G175400 chrUn 85.938 128 12 6 1736 1859 350272688 350272563 5.300000e-27 132.0
21 TraesCS3D01G175400 chr6D 96.447 197 5 2 2168 2363 367567611 367567806 8.150000e-85 324.0
22 TraesCS3D01G175400 chr6D 96.447 197 5 2 2168 2363 446752409 446752604 8.150000e-85 324.0
23 TraesCS3D01G175400 chr6D 92.500 120 4 4 1898 2014 112414929 112415046 1.450000e-37 167.0
24 TraesCS3D01G175400 chr1D 96.447 197 5 2 2168 2363 18468429 18468624 8.150000e-85 324.0
25 TraesCS3D01G175400 chr1D 96.447 197 5 2 2168 2363 32974166 32973971 8.150000e-85 324.0
26 TraesCS3D01G175400 chr1D 96.447 197 5 2 2168 2363 416368619 416368814 8.150000e-85 324.0
27 TraesCS3D01G175400 chr1D 90.171 234 23 0 1164 1397 486007292 486007059 2.950000e-79 305.0
28 TraesCS3D01G175400 chr1D 89.167 120 8 4 1898 2014 481182283 481182166 6.810000e-31 145.0
29 TraesCS3D01G175400 chr1B 81.937 382 52 12 993 1373 676739543 676739178 8.200000e-80 307.0
30 TraesCS3D01G175400 chr1A 80.425 424 56 17 989 1397 583587675 583587264 4.940000e-77 298.0
31 TraesCS3D01G175400 chr2D 96.951 164 5 0 2011 2174 220630875 220631038 2.310000e-70 276.0
32 TraesCS3D01G175400 chr4D 96.386 166 6 0 2009 2174 503699085 503699250 8.320000e-70 274.0
33 TraesCS3D01G175400 chr4D 89.256 121 7 5 1898 2014 416938186 416938068 1.890000e-31 147.0
34 TraesCS3D01G175400 chr5A 90.984 122 6 4 1896 2014 6863798 6863679 2.430000e-35 159.0
35 TraesCS3D01G175400 chr5A 85.263 95 13 1 1623 1716 665447323 665447417 1.930000e-16 97.1
36 TraesCS3D01G175400 chr5A 97.561 41 1 0 155 195 317910341 317910381 1.170000e-08 71.3
37 TraesCS3D01G175400 chr3A 89.344 122 9 3 1895 2014 732487147 732487028 1.460000e-32 150.0
38 TraesCS3D01G175400 chr2A 89.916 119 7 4 1899 2014 751890808 751890692 5.260000e-32 148.0
39 TraesCS3D01G175400 chr2A 84.252 127 15 4 1736 1859 136754674 136754550 4.130000e-23 119.0
40 TraesCS3D01G175400 chr2A 82.258 124 18 4 1738 1859 194465355 194465234 1.160000e-18 104.0
41 TraesCS3D01G175400 chr5B 82.258 124 18 4 1604 1725 674419113 674419234 1.160000e-18 104.0
42 TraesCS3D01G175400 chr6A 93.103 58 4 0 1900 1957 518503072 518503129 4.180000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G175400 chr3D 157215434 157217796 2362 False 4364.0 4364 100.000 1 2363 1 chr3D.!!$F1 2362
1 TraesCS3D01G175400 chr3B 228424007 228425641 1634 False 551.5 606 89.483 1136 2011 2 chr3B.!!$F3 875
2 TraesCS3D01G175400 chr3B 228393195 228394149 954 False 502.0 508 83.900 3 1051 2 chr3B.!!$F2 1048

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
952 992 0.178767 TCACTGCATTCCCTGATCCG 59.821 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2228 3031 0.108567 GGGAAGAACAGACCGAGCTC 60.109 60.0 2.73 2.73 0.0 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 49 5.186021 TGTTAAAAGAGAAAAAGTGTGGGCA 59.814 36.000 0.00 0.00 0.00 5.36
57 59 3.695606 TGTGGGCAGAGACGGAGC 61.696 66.667 0.00 0.00 0.00 4.70
66 68 2.048127 AGACGGAGCCGAACTTGC 60.048 61.111 16.83 0.00 42.83 4.01
70 72 2.802667 CGGAGCCGAACTTGCGATG 61.803 63.158 2.00 0.00 42.83 3.84
85 87 2.213499 GCGATGTCAACCTTCCCATAG 58.787 52.381 0.00 0.00 0.00 2.23
109 111 2.007608 GGGCGAACAACTAGGACATTC 58.992 52.381 0.00 0.00 0.00 2.67
121 123 1.623811 AGGACATTCCACTACTTGCGT 59.376 47.619 0.00 0.00 39.61 5.24
161 166 8.448615 CCCCTAAACAATAAAAGACTAACTTCG 58.551 37.037 0.00 0.00 37.93 3.79
173 178 7.860918 AAGACTAACTTCGTTTTTCTCCTTT 57.139 32.000 0.00 0.00 32.91 3.11
226 231 4.415783 GGAAGCATCCCAAACCGT 57.584 55.556 0.00 0.00 40.10 4.83
231 236 2.812358 AGCATCCCAAACCGTTTTTC 57.188 45.000 0.00 0.00 0.00 2.29
237 242 5.467063 GCATCCCAAACCGTTTTTCATTTAA 59.533 36.000 0.00 0.00 0.00 1.52
239 244 7.308288 GCATCCCAAACCGTTTTTCATTTAATT 60.308 33.333 0.00 0.00 0.00 1.40
462 485 9.603921 AAATGAACTTTTCAACATTGATGAACT 57.396 25.926 8.68 0.00 43.95 3.01
463 486 9.603921 AATGAACTTTTCAACATTGATGAACTT 57.396 25.926 8.68 2.12 43.95 2.66
464 487 9.603921 ATGAACTTTTCAACATTGATGAACTTT 57.396 25.926 8.68 3.40 43.95 2.66
465 488 9.434420 TGAACTTTTCAACATTGATGAACTTTT 57.566 25.926 8.68 3.10 36.57 2.27
541 564 7.928908 TGGAAAGTTTTCAAAATCGATGAAG 57.071 32.000 0.00 0.00 38.01 3.02
560 583 9.410556 CGATGAAGTTTTTGTCCAAAATCTATT 57.589 29.630 13.57 3.28 38.60 1.73
603 626 8.851541 AATGATATTTTCCAAATTTGTGCACT 57.148 26.923 19.41 0.00 0.00 4.40
604 627 8.851541 ATGATATTTTCCAAATTTGTGCACTT 57.148 26.923 19.41 0.48 0.00 3.16
605 628 8.674263 TGATATTTTCCAAATTTGTGCACTTT 57.326 26.923 19.41 7.59 0.00 2.66
606 629 9.770097 TGATATTTTCCAAATTTGTGCACTTTA 57.230 25.926 19.41 3.40 0.00 1.85
608 631 9.777297 ATATTTTCCAAATTTGTGCACTTTACT 57.223 25.926 19.41 0.00 0.00 2.24
609 632 7.913674 TTTTCCAAATTTGTGCACTTTACTT 57.086 28.000 19.41 2.30 0.00 2.24
610 633 7.532682 TTTCCAAATTTGTGCACTTTACTTC 57.467 32.000 19.41 0.00 0.00 3.01
611 634 6.214191 TCCAAATTTGTGCACTTTACTTCA 57.786 33.333 19.41 0.00 0.00 3.02
612 635 6.634805 TCCAAATTTGTGCACTTTACTTCAA 58.365 32.000 19.41 0.00 0.00 2.69
613 636 7.099764 TCCAAATTTGTGCACTTTACTTCAAA 58.900 30.769 19.41 7.83 0.00 2.69
614 637 7.604164 TCCAAATTTGTGCACTTTACTTCAAAA 59.396 29.630 19.41 7.02 0.00 2.44
615 638 8.397148 CCAAATTTGTGCACTTTACTTCAAAAT 58.603 29.630 19.41 9.08 0.00 1.82
616 639 9.771915 CAAATTTGTGCACTTTACTTCAAAATT 57.228 25.926 19.41 14.28 0.00 1.82
617 640 9.771915 AAATTTGTGCACTTTACTTCAAAATTG 57.228 25.926 19.41 0.00 0.00 2.32
618 641 8.715191 ATTTGTGCACTTTACTTCAAAATTGA 57.285 26.923 19.41 0.00 34.92 2.57
619 642 8.715191 TTTGTGCACTTTACTTCAAAATTGAT 57.285 26.923 19.41 0.00 37.00 2.57
620 643 7.697352 TGTGCACTTTACTTCAAAATTGATG 57.303 32.000 19.41 7.31 37.00 3.07
621 644 7.487484 TGTGCACTTTACTTCAAAATTGATGA 58.513 30.769 19.41 0.00 37.00 2.92
622 645 7.978414 TGTGCACTTTACTTCAAAATTGATGAA 59.022 29.630 19.41 6.72 37.00 2.57
623 646 8.268738 GTGCACTTTACTTCAAAATTGATGAAC 58.731 33.333 10.32 2.16 37.00 3.18
624 647 8.196771 TGCACTTTACTTCAAAATTGATGAACT 58.803 29.630 13.92 0.00 37.00 3.01
625 648 9.034544 GCACTTTACTTCAAAATTGATGAACTT 57.965 29.630 13.92 0.00 37.00 2.66
654 677 8.710835 TTTTCCAAACTTGACATACCTTTTTC 57.289 30.769 0.00 0.00 0.00 2.29
655 678 7.411486 TTCCAAACTTGACATACCTTTTTCA 57.589 32.000 0.00 0.00 0.00 2.69
656 679 6.801575 TCCAAACTTGACATACCTTTTTCAC 58.198 36.000 0.00 0.00 0.00 3.18
862 902 5.769484 TTTTTACCATGTTGGCGAACTTA 57.231 34.783 13.01 0.00 42.67 2.24
872 912 6.698359 TGTTGGCGAACTTATTTTTATTGC 57.302 33.333 13.01 0.00 32.79 3.56
884 924 9.683069 ACTTATTTTTATTGCGAATCCATGATC 57.317 29.630 0.00 0.00 0.00 2.92
885 925 9.903682 CTTATTTTTATTGCGAATCCATGATCT 57.096 29.630 0.00 0.00 0.00 2.75
932 972 3.258872 TGGTAAGTAGAAGCAAACGCCTA 59.741 43.478 0.00 0.00 0.00 3.93
935 975 3.887621 AGTAGAAGCAAACGCCTATCA 57.112 42.857 0.00 0.00 0.00 2.15
945 985 0.179045 ACGCCTATCACTGCATTCCC 60.179 55.000 0.00 0.00 0.00 3.97
952 992 0.178767 TCACTGCATTCCCTGATCCG 59.821 55.000 0.00 0.00 0.00 4.18
974 1014 5.932303 CCGAAATTCAGAACTACCTCAAGAA 59.068 40.000 0.00 0.00 0.00 2.52
979 1019 9.883142 AAATTCAGAACTACCTCAAGAATAGAG 57.117 33.333 0.00 0.00 0.00 2.43
992 1032 5.578336 TCAAGAATAGAGAATCAAGCGTGTG 59.422 40.000 0.00 0.00 37.82 3.82
999 1039 3.839293 AGAATCAAGCGTGTGTAGAGAC 58.161 45.455 0.00 0.00 0.00 3.36
1010 1050 2.289631 TGTGTAGAGACATGGCAACCTG 60.290 50.000 0.00 0.00 38.04 4.00
1026 1066 1.442526 CCTGCAGATTCCACATCGCC 61.443 60.000 17.39 0.00 0.00 5.54
1051 1091 0.324460 CCCCCTCCTCGTCTGTAAGT 60.324 60.000 0.00 0.00 33.76 2.24
1052 1092 1.064166 CCCCCTCCTCGTCTGTAAGTA 60.064 57.143 0.00 0.00 33.76 2.24
1053 1093 2.299521 CCCCTCCTCGTCTGTAAGTAG 58.700 57.143 0.00 0.00 33.76 2.57
1054 1094 2.092538 CCCCTCCTCGTCTGTAAGTAGA 60.093 54.545 0.00 0.00 33.76 2.59
1055 1095 2.944349 CCCTCCTCGTCTGTAAGTAGAC 59.056 54.545 0.00 0.00 42.83 2.59
1056 1096 3.607741 CCTCCTCGTCTGTAAGTAGACA 58.392 50.000 6.71 0.00 45.78 3.41
1057 1097 3.623960 CCTCCTCGTCTGTAAGTAGACAG 59.376 52.174 6.71 0.00 45.78 3.51
1058 1098 3.607741 TCCTCGTCTGTAAGTAGACAGG 58.392 50.000 13.47 13.47 45.78 4.00
1059 1099 3.008813 TCCTCGTCTGTAAGTAGACAGGT 59.991 47.826 16.54 0.00 45.78 4.00
1060 1100 3.374678 CCTCGTCTGTAAGTAGACAGGTC 59.625 52.174 6.71 0.00 45.78 3.85
1061 1101 3.341823 TCGTCTGTAAGTAGACAGGTCC 58.658 50.000 6.71 0.00 45.78 4.46
1062 1102 3.079578 CGTCTGTAAGTAGACAGGTCCA 58.920 50.000 6.71 0.00 45.78 4.02
1063 1103 3.504906 CGTCTGTAAGTAGACAGGTCCAA 59.495 47.826 6.71 0.00 45.78 3.53
1064 1104 4.158025 CGTCTGTAAGTAGACAGGTCCAAT 59.842 45.833 6.71 0.00 45.78 3.16
1065 1105 5.336531 CGTCTGTAAGTAGACAGGTCCAATT 60.337 44.000 6.71 0.00 45.78 2.32
1066 1106 6.100668 GTCTGTAAGTAGACAGGTCCAATTC 58.899 44.000 3.87 0.00 45.79 2.17
1067 1107 6.017192 TCTGTAAGTAGACAGGTCCAATTCT 58.983 40.000 3.87 0.00 45.79 2.40
1068 1108 6.497259 TCTGTAAGTAGACAGGTCCAATTCTT 59.503 38.462 3.87 0.00 45.79 2.52
1069 1109 6.464222 TGTAAGTAGACAGGTCCAATTCTTG 58.536 40.000 0.00 0.00 0.00 3.02
1070 1110 5.568620 AAGTAGACAGGTCCAATTCTTGT 57.431 39.130 0.00 0.00 0.00 3.16
1071 1111 5.568620 AGTAGACAGGTCCAATTCTTGTT 57.431 39.130 0.00 0.00 0.00 2.83
1072 1112 5.941788 AGTAGACAGGTCCAATTCTTGTTT 58.058 37.500 0.00 0.00 0.00 2.83
1073 1113 6.365520 AGTAGACAGGTCCAATTCTTGTTTT 58.634 36.000 0.00 0.00 0.00 2.43
1074 1114 7.514721 AGTAGACAGGTCCAATTCTTGTTTTA 58.485 34.615 0.00 0.00 0.00 1.52
1075 1115 6.884280 AGACAGGTCCAATTCTTGTTTTAG 57.116 37.500 0.00 0.00 0.00 1.85
1076 1116 6.365520 AGACAGGTCCAATTCTTGTTTTAGT 58.634 36.000 0.00 0.00 0.00 2.24
1077 1117 6.263168 AGACAGGTCCAATTCTTGTTTTAGTG 59.737 38.462 0.00 0.00 0.00 2.74
1078 1118 5.301805 ACAGGTCCAATTCTTGTTTTAGTGG 59.698 40.000 0.00 0.00 0.00 4.00
1079 1119 4.280929 AGGTCCAATTCTTGTTTTAGTGGC 59.719 41.667 0.00 0.00 0.00 5.01
1080 1120 4.038642 GGTCCAATTCTTGTTTTAGTGGCA 59.961 41.667 0.00 0.00 0.00 4.92
1081 1121 5.222631 GTCCAATTCTTGTTTTAGTGGCAG 58.777 41.667 0.00 0.00 0.00 4.85
1082 1122 4.892934 TCCAATTCTTGTTTTAGTGGCAGT 59.107 37.500 0.00 0.00 0.00 4.40
1083 1123 5.362430 TCCAATTCTTGTTTTAGTGGCAGTT 59.638 36.000 0.00 0.00 0.00 3.16
1084 1124 6.048509 CCAATTCTTGTTTTAGTGGCAGTTT 58.951 36.000 0.00 0.00 0.00 2.66
1085 1125 6.538381 CCAATTCTTGTTTTAGTGGCAGTTTT 59.462 34.615 0.00 0.00 0.00 2.43
1086 1126 7.065683 CCAATTCTTGTTTTAGTGGCAGTTTTT 59.934 33.333 0.00 0.00 0.00 1.94
1105 1145 5.957842 TTTTTCGAACCATAGCAACTCAT 57.042 34.783 0.00 0.00 0.00 2.90
1106 1146 4.944962 TTTCGAACCATAGCAACTCATG 57.055 40.909 0.00 0.00 0.00 3.07
1123 1163 8.712285 CAACTCATGCTTTGAAATGGATTTAT 57.288 30.769 0.96 0.00 32.78 1.40
1124 1164 9.806203 CAACTCATGCTTTGAAATGGATTTATA 57.194 29.630 0.96 0.00 32.78 0.98
1126 1166 9.193806 ACTCATGCTTTGAAATGGATTTATAGT 57.806 29.630 0.00 0.00 32.78 2.12
1164 1204 2.426522 ACTGTGGTTCGTGGATTCATG 58.573 47.619 0.00 0.00 0.00 3.07
1171 1211 4.875536 TGGTTCGTGGATTCATGTATTCAG 59.124 41.667 0.00 0.00 0.00 3.02
1189 1229 1.303561 GGTGTCATGCTGCTGGGAA 60.304 57.895 0.00 0.00 0.00 3.97
1227 1267 3.818787 GCCGTGGCTTGCCATCAG 61.819 66.667 17.86 11.73 38.26 2.90
1229 1269 1.078497 CCGTGGCTTGCCATCAGTA 60.078 57.895 17.86 0.00 0.00 2.74
1230 1270 1.369091 CCGTGGCTTGCCATCAGTAC 61.369 60.000 17.86 2.76 0.00 2.73
1231 1271 0.391661 CGTGGCTTGCCATCAGTACT 60.392 55.000 17.86 0.00 0.00 2.73
1254 1294 3.737355 GCCTGGAAGTCGACTACATAACC 60.737 52.174 20.39 14.88 0.00 2.85
1365 1405 7.148423 GGGATCAACCAAACTTGCAATTAAATC 60.148 37.037 0.00 0.00 41.20 2.17
1366 1406 7.387397 GGATCAACCAAACTTGCAATTAAATCA 59.613 33.333 0.00 0.00 38.79 2.57
1395 1435 7.936847 TGAGGTATTGTTGTAACTTCATGTCTT 59.063 33.333 0.00 0.00 0.00 3.01
1397 1437 7.117812 AGGTATTGTTGTAACTTCATGTCTTCG 59.882 37.037 0.00 0.00 0.00 3.79
1405 1445 8.277490 TGTAACTTCATGTCTTCGTATAGAGT 57.723 34.615 0.00 0.00 0.00 3.24
1406 1446 9.387257 TGTAACTTCATGTCTTCGTATAGAGTA 57.613 33.333 0.00 0.00 0.00 2.59
1431 1473 5.945466 TGTATGAACGTGTGTCTGTACTA 57.055 39.130 0.00 0.00 0.00 1.82
1565 2332 2.283298 CTACCACAAGCTACATGCCTG 58.717 52.381 0.00 0.00 44.23 4.85
1566 2333 0.692476 ACCACAAGCTACATGCCTGA 59.308 50.000 0.00 0.00 44.23 3.86
1567 2334 1.339438 ACCACAAGCTACATGCCTGAG 60.339 52.381 0.00 0.00 44.23 3.35
1568 2335 1.376543 CACAAGCTACATGCCTGAGG 58.623 55.000 0.00 0.00 44.23 3.86
1604 2380 7.410942 GCTTTAGATTAGCGATGGATTAACGAG 60.411 40.741 0.00 0.00 0.00 4.18
1610 2386 2.205074 CGATGGATTAACGAGCTGCTT 58.795 47.619 2.53 0.00 0.00 3.91
1612 2388 2.760634 TGGATTAACGAGCTGCTTGA 57.239 45.000 23.27 1.40 0.00 3.02
1625 2401 2.287009 GCTGCTTGACTTGTTAACGCTT 60.287 45.455 0.26 0.00 0.00 4.68
1664 2440 7.279313 TCGTTATGCTTAATGAGTAGAAAACCC 59.721 37.037 9.57 0.00 31.28 4.11
1678 2454 1.780503 AAACCCTGCTTGCTCTGTTT 58.219 45.000 0.00 0.00 0.00 2.83
1690 2466 4.014847 TGCTCTGTTTGTTTGAAACTCG 57.985 40.909 9.69 0.00 0.00 4.18
1720 2496 3.912563 CGTGAGCGCTCGTTAACATATAT 59.087 43.478 30.75 0.00 0.00 0.86
1723 2499 6.250739 CGTGAGCGCTCGTTAACATATATTAT 59.749 38.462 30.75 0.00 0.00 1.28
1724 2500 7.201325 CGTGAGCGCTCGTTAACATATATTATT 60.201 37.037 30.75 0.00 0.00 1.40
1767 2543 0.818296 GATGGTCTGAGGTGCTACGT 59.182 55.000 0.00 0.00 0.00 3.57
1799 2575 7.040823 TGTCATGCAATGTAGAAATGTGTGTTA 60.041 33.333 0.00 0.00 46.80 2.41
1800 2576 7.970061 GTCATGCAATGTAGAAATGTGTGTTAT 59.030 33.333 0.00 0.00 46.80 1.89
1801 2577 7.969508 TCATGCAATGTAGAAATGTGTGTTATG 59.030 33.333 0.00 0.00 46.80 1.90
1826 2602 7.115805 TGTTGTACTAACGAGCTTAATGAGTTG 59.884 37.037 0.00 0.00 0.00 3.16
1843 2619 5.151632 GAGTTGCTTGTGAAACTCGTTAA 57.848 39.130 1.68 0.00 45.69 2.01
1847 2623 3.244345 TGCTTGTGAAACTCGTTAACTCG 59.756 43.478 3.71 0.00 38.04 4.18
1875 2677 6.624861 CGTTAAGCTTTGCCCATTAAGAATCA 60.625 38.462 3.20 0.00 0.00 2.57
1923 2725 3.374367 GGCGGACCTAAAGAGAAAATGAC 59.626 47.826 0.00 0.00 0.00 3.06
1925 2727 4.833390 CGGACCTAAAGAGAAAATGACCT 58.167 43.478 0.00 0.00 0.00 3.85
1936 2738 2.789409 AAATGACCTGGTGTCCTAGC 57.211 50.000 2.82 0.00 43.78 3.42
1937 2739 1.656587 AATGACCTGGTGTCCTAGCA 58.343 50.000 2.82 0.00 43.78 3.49
1943 2745 3.580458 GACCTGGTGTCCTAGCATATGAT 59.420 47.826 2.82 1.82 38.09 2.45
1984 2787 4.591321 AGATGGGGTGTCACACATTATT 57.409 40.909 10.85 0.00 35.86 1.40
1988 2791 5.968528 TGGGGTGTCACACATTATTTTAC 57.031 39.130 10.85 0.00 35.86 2.01
1991 2794 5.387279 GGGTGTCACACATTATTTTACACG 58.613 41.667 10.85 0.00 37.27 4.49
2011 2814 5.181622 ACACGTGAAACTTACAAAGGAAACA 59.818 36.000 25.01 0.00 31.75 2.83
2012 2815 6.127842 ACACGTGAAACTTACAAAGGAAACAT 60.128 34.615 25.01 0.00 31.75 2.71
2013 2816 6.413818 CACGTGAAACTTACAAAGGAAACATC 59.586 38.462 10.90 0.00 31.75 3.06
2014 2817 5.912955 CGTGAAACTTACAAAGGAAACATCC 59.087 40.000 0.00 0.00 31.75 3.51
2015 2818 6.459024 CGTGAAACTTACAAAGGAAACATCCA 60.459 38.462 0.00 0.00 31.75 3.41
2016 2819 6.695713 GTGAAACTTACAAAGGAAACATCCAC 59.304 38.462 0.00 0.00 0.00 4.02
2017 2820 6.605594 TGAAACTTACAAAGGAAACATCCACT 59.394 34.615 0.00 0.00 0.00 4.00
2018 2821 7.776030 TGAAACTTACAAAGGAAACATCCACTA 59.224 33.333 0.00 0.00 0.00 2.74
2019 2822 8.706322 AAACTTACAAAGGAAACATCCACTAT 57.294 30.769 0.00 0.00 0.00 2.12
2020 2823 8.706322 AACTTACAAAGGAAACATCCACTATT 57.294 30.769 0.00 0.00 0.00 1.73
2021 2824 9.802039 AACTTACAAAGGAAACATCCACTATTA 57.198 29.630 0.00 0.00 0.00 0.98
2022 2825 9.449719 ACTTACAAAGGAAACATCCACTATTAG 57.550 33.333 0.00 0.00 0.00 1.73
2023 2826 9.667107 CTTACAAAGGAAACATCCACTATTAGA 57.333 33.333 0.00 0.00 0.00 2.10
2025 2828 8.934023 ACAAAGGAAACATCCACTATTAGAAA 57.066 30.769 0.00 0.00 0.00 2.52
2026 2829 9.362151 ACAAAGGAAACATCCACTATTAGAAAA 57.638 29.630 0.00 0.00 0.00 2.29
2029 2832 8.581253 AGGAAACATCCACTATTAGAAAAAGG 57.419 34.615 0.00 0.00 0.00 3.11
2030 2833 7.615757 AGGAAACATCCACTATTAGAAAAAGGG 59.384 37.037 0.00 0.00 0.00 3.95
2031 2834 7.396339 GGAAACATCCACTATTAGAAAAAGGGT 59.604 37.037 0.00 0.00 0.00 4.34
2032 2835 7.939784 AACATCCACTATTAGAAAAAGGGTC 57.060 36.000 0.00 0.00 0.00 4.46
2033 2836 7.027874 ACATCCACTATTAGAAAAAGGGTCA 57.972 36.000 0.00 0.00 0.00 4.02
2034 2837 7.466804 ACATCCACTATTAGAAAAAGGGTCAA 58.533 34.615 0.00 0.00 0.00 3.18
2035 2838 7.947890 ACATCCACTATTAGAAAAAGGGTCAAA 59.052 33.333 0.00 0.00 0.00 2.69
2036 2839 8.971073 CATCCACTATTAGAAAAAGGGTCAAAT 58.029 33.333 0.00 0.00 0.00 2.32
2037 2840 8.348285 TCCACTATTAGAAAAAGGGTCAAATG 57.652 34.615 0.00 0.00 0.00 2.32
2038 2841 7.947890 TCCACTATTAGAAAAAGGGTCAAATGT 59.052 33.333 0.00 0.00 0.00 2.71
2039 2842 8.244113 CCACTATTAGAAAAAGGGTCAAATGTC 58.756 37.037 0.00 0.00 0.00 3.06
2040 2843 8.792633 CACTATTAGAAAAAGGGTCAAATGTCA 58.207 33.333 0.00 0.00 0.00 3.58
2041 2844 9.362151 ACTATTAGAAAAAGGGTCAAATGTCAA 57.638 29.630 0.00 0.00 0.00 3.18
2042 2845 9.846248 CTATTAGAAAAAGGGTCAAATGTCAAG 57.154 33.333 0.00 0.00 0.00 3.02
2043 2846 4.948847 AGAAAAAGGGTCAAATGTCAAGC 58.051 39.130 0.00 0.00 0.00 4.01
2044 2847 4.405358 AGAAAAAGGGTCAAATGTCAAGCA 59.595 37.500 0.00 0.00 0.00 3.91
2045 2848 3.733443 AAAGGGTCAAATGTCAAGCAC 57.267 42.857 0.00 0.00 0.00 4.40
2046 2849 2.363306 AGGGTCAAATGTCAAGCACA 57.637 45.000 0.00 0.00 40.18 4.57
2056 2859 3.002791 ATGTCAAGCACATTAGTGTCGG 58.997 45.455 0.00 0.00 43.89 4.79
2057 2860 3.557054 ATGTCAAGCACATTAGTGTCGGT 60.557 43.478 0.00 0.00 43.89 4.69
2058 2861 5.042441 ATGTCAAGCACATTAGTGTCGGTT 61.042 41.667 0.00 0.00 43.89 4.44
2059 2862 6.489439 ATGTCAAGCACATTAGTGTCGGTTT 61.489 40.000 0.00 0.00 43.89 3.27
2060 2863 8.429320 ATGTCAAGCACATTAGTGTCGGTTTG 62.429 42.308 0.00 0.00 43.89 2.93
2063 2866 3.896648 CACATTAGTGTCGGTTTGCTT 57.103 42.857 0.00 0.00 40.92 3.91
2064 2867 4.223320 CACATTAGTGTCGGTTTGCTTT 57.777 40.909 0.00 0.00 40.92 3.51
2065 2868 4.606961 CACATTAGTGTCGGTTTGCTTTT 58.393 39.130 0.00 0.00 40.92 2.27
2066 2869 4.440758 CACATTAGTGTCGGTTTGCTTTTG 59.559 41.667 0.00 0.00 40.92 2.44
2067 2870 4.336993 ACATTAGTGTCGGTTTGCTTTTGA 59.663 37.500 0.00 0.00 31.41 2.69
2068 2871 4.545823 TTAGTGTCGGTTTGCTTTTGAG 57.454 40.909 0.00 0.00 0.00 3.02
2069 2872 1.065551 AGTGTCGGTTTGCTTTTGAGC 59.934 47.619 0.00 0.00 0.00 4.26
2070 2873 0.383949 TGTCGGTTTGCTTTTGAGCC 59.616 50.000 0.00 0.00 0.00 4.70
2071 2874 0.660300 GTCGGTTTGCTTTTGAGCCG 60.660 55.000 0.00 0.00 40.43 5.52
2072 2875 1.371635 CGGTTTGCTTTTGAGCCGG 60.372 57.895 0.00 0.00 36.05 6.13
2073 2876 1.664649 GGTTTGCTTTTGAGCCGGC 60.665 57.895 21.89 21.89 0.00 6.13
2074 2877 1.067250 GTTTGCTTTTGAGCCGGCA 59.933 52.632 31.54 5.56 0.00 5.69
2075 2878 1.067250 TTTGCTTTTGAGCCGGCAC 59.933 52.632 31.54 24.60 34.30 5.01
2076 2879 1.391157 TTTGCTTTTGAGCCGGCACT 61.391 50.000 31.54 9.09 34.30 4.40
2077 2880 0.536233 TTGCTTTTGAGCCGGCACTA 60.536 50.000 31.54 17.63 34.30 2.74
2078 2881 0.536233 TGCTTTTGAGCCGGCACTAA 60.536 50.000 31.54 22.93 0.00 2.24
2079 2882 0.811281 GCTTTTGAGCCGGCACTAAT 59.189 50.000 31.54 7.13 0.00 1.73
2080 2883 1.468054 GCTTTTGAGCCGGCACTAATG 60.468 52.381 31.54 25.53 0.00 1.90
2081 2884 1.812571 CTTTTGAGCCGGCACTAATGT 59.187 47.619 31.54 5.22 0.00 2.71
2082 2885 1.164411 TTTGAGCCGGCACTAATGTG 58.836 50.000 31.54 0.00 46.37 3.21
2083 2886 0.036164 TTGAGCCGGCACTAATGTGT 59.964 50.000 31.54 3.33 45.44 3.72
2084 2887 0.673333 TGAGCCGGCACTAATGTGTG 60.673 55.000 31.54 0.00 45.44 3.82
2101 2904 4.312052 GCATTAGTGCCGGTTCCA 57.688 55.556 1.90 0.00 45.76 3.53
2102 2905 2.562125 GCATTAGTGCCGGTTCCAA 58.438 52.632 1.90 0.00 45.76 3.53
2103 2906 0.170339 GCATTAGTGCCGGTTCCAAC 59.830 55.000 1.90 0.00 45.76 3.77
2104 2907 0.446222 CATTAGTGCCGGTTCCAACG 59.554 55.000 1.90 0.00 0.00 4.10
2110 2913 2.818274 CCGGTTCCAACGGCTAGC 60.818 66.667 6.04 6.04 45.34 3.42
2111 2914 2.818274 CGGTTCCAACGGCTAGCC 60.818 66.667 24.75 24.75 0.00 3.93
2112 2915 2.349755 GGTTCCAACGGCTAGCCA 59.650 61.111 32.47 10.81 35.37 4.75
2113 2916 1.745489 GGTTCCAACGGCTAGCCAG 60.745 63.158 32.47 25.43 35.37 4.85
2127 2930 2.482326 GCCAGCCGCTTTCATTAGT 58.518 52.632 0.00 0.00 0.00 2.24
2128 2931 1.663695 GCCAGCCGCTTTCATTAGTA 58.336 50.000 0.00 0.00 0.00 1.82
2129 2932 1.330829 GCCAGCCGCTTTCATTAGTAC 59.669 52.381 0.00 0.00 0.00 2.73
2130 2933 1.940613 CCAGCCGCTTTCATTAGTACC 59.059 52.381 0.00 0.00 0.00 3.34
2131 2934 1.593006 CAGCCGCTTTCATTAGTACCG 59.407 52.381 0.00 0.00 0.00 4.02
2132 2935 0.935196 GCCGCTTTCATTAGTACCGG 59.065 55.000 0.00 0.00 37.43 5.28
2133 2936 1.741394 GCCGCTTTCATTAGTACCGGT 60.741 52.381 13.98 13.98 36.79 5.28
2134 2937 2.624636 CCGCTTTCATTAGTACCGGTT 58.375 47.619 15.04 0.00 0.00 4.44
2135 2938 2.606272 CCGCTTTCATTAGTACCGGTTC 59.394 50.000 15.04 8.12 0.00 3.62
2136 2939 2.280708 CGCTTTCATTAGTACCGGTTCG 59.719 50.000 15.04 0.00 0.00 3.95
2137 2940 3.256558 GCTTTCATTAGTACCGGTTCGT 58.743 45.455 15.04 0.00 0.00 3.85
2138 2941 3.061697 GCTTTCATTAGTACCGGTTCGTG 59.938 47.826 15.04 10.08 0.00 4.35
2139 2942 2.945447 TCATTAGTACCGGTTCGTGG 57.055 50.000 15.04 0.29 0.00 4.94
2140 2943 1.135024 TCATTAGTACCGGTTCGTGGC 60.135 52.381 15.04 0.00 0.00 5.01
2141 2944 0.176449 ATTAGTACCGGTTCGTGGCC 59.824 55.000 15.04 0.00 0.00 5.36
2148 2951 2.281276 GGTTCGTGGCCGACCTTT 60.281 61.111 0.00 0.00 44.13 3.11
2149 2952 1.004679 GGTTCGTGGCCGACCTTTA 60.005 57.895 0.00 0.00 44.13 1.85
2150 2953 1.017701 GGTTCGTGGCCGACCTTTAG 61.018 60.000 0.00 0.00 44.13 1.85
2151 2954 1.375013 TTCGTGGCCGACCTTTAGC 60.375 57.895 0.00 0.00 44.13 3.09
2152 2955 2.047655 CGTGGCCGACCTTTAGCA 60.048 61.111 0.00 0.00 36.63 3.49
2153 2956 2.388232 CGTGGCCGACCTTTAGCAC 61.388 63.158 0.00 0.00 36.63 4.40
2154 2957 2.038837 GTGGCCGACCTTTAGCACC 61.039 63.158 0.00 0.00 36.63 5.01
2155 2958 2.818274 GGCCGACCTTTAGCACCG 60.818 66.667 0.00 0.00 0.00 4.94
2156 2959 2.818274 GCCGACCTTTAGCACCGG 60.818 66.667 0.00 0.00 42.74 5.28
2157 2960 2.660802 CCGACCTTTAGCACCGGT 59.339 61.111 0.00 0.00 35.83 5.28
2158 2961 1.004200 CCGACCTTTAGCACCGGTT 60.004 57.895 2.97 0.00 35.83 4.44
2159 2962 1.017701 CCGACCTTTAGCACCGGTTC 61.018 60.000 2.97 0.00 35.83 3.62
2160 2963 1.349259 CGACCTTTAGCACCGGTTCG 61.349 60.000 2.97 5.32 0.00 3.95
2161 2964 0.320160 GACCTTTAGCACCGGTTCGT 60.320 55.000 2.97 0.00 0.00 3.85
2162 2965 0.601841 ACCTTTAGCACCGGTTCGTG 60.602 55.000 2.97 0.00 36.80 4.35
2168 2971 2.668212 CACCGGTTCGTGCCATGT 60.668 61.111 2.97 0.00 0.00 3.21
2169 2972 1.374885 CACCGGTTCGTGCCATGTA 60.375 57.895 2.97 0.00 0.00 2.29
2170 2973 1.375013 ACCGGTTCGTGCCATGTAC 60.375 57.895 0.00 0.00 0.00 2.90
2171 2974 2.104253 CCGGTTCGTGCCATGTACC 61.104 63.158 2.79 2.79 0.00 3.34
2172 2975 2.449525 CGGTTCGTGCCATGTACCG 61.450 63.158 18.64 18.64 40.63 4.02
2173 2976 2.104253 GGTTCGTGCCATGTACCGG 61.104 63.158 0.00 0.00 0.00 5.28
2174 2977 2.104253 GTTCGTGCCATGTACCGGG 61.104 63.158 6.32 0.00 0.00 5.73
2180 2983 4.849310 CCATGTACCGGGCCGTGG 62.849 72.222 26.32 21.10 0.00 4.94
2199 3002 2.159181 CACGAACCGGTGCTAAAGG 58.841 57.895 8.52 0.00 0.00 3.11
2200 3003 0.601841 CACGAACCGGTGCTAAAGGT 60.602 55.000 8.52 0.00 40.50 3.50
2201 3004 0.320160 ACGAACCGGTGCTAAAGGTC 60.320 55.000 8.52 0.00 37.26 3.85
2202 3005 1.349259 CGAACCGGTGCTAAAGGTCG 61.349 60.000 8.52 7.35 37.26 4.79
2203 3006 0.320160 GAACCGGTGCTAAAGGTCGT 60.320 55.000 8.52 0.00 37.26 4.34
2204 3007 0.320160 AACCGGTGCTAAAGGTCGTC 60.320 55.000 8.52 0.00 37.26 4.20
2205 3008 1.447314 CCGGTGCTAAAGGTCGTCC 60.447 63.158 0.00 0.00 0.00 4.79
2207 3010 0.813184 CGGTGCTAAAGGTCGTCCTA 59.187 55.000 0.37 0.00 44.35 2.94
2208 3011 1.468736 CGGTGCTAAAGGTCGTCCTAC 60.469 57.143 0.37 0.00 44.35 3.18
2209 3012 1.547372 GGTGCTAAAGGTCGTCCTACA 59.453 52.381 0.37 0.00 44.35 2.74
2210 3013 2.167900 GGTGCTAAAGGTCGTCCTACAT 59.832 50.000 0.37 0.00 44.35 2.29
2211 3014 3.382546 GGTGCTAAAGGTCGTCCTACATA 59.617 47.826 0.37 0.00 44.35 2.29
2212 3015 4.142093 GGTGCTAAAGGTCGTCCTACATAA 60.142 45.833 0.37 0.00 44.35 1.90
2213 3016 5.041940 GTGCTAAAGGTCGTCCTACATAAG 58.958 45.833 0.37 0.00 44.35 1.73
2214 3017 4.049869 GCTAAAGGTCGTCCTACATAAGC 58.950 47.826 0.37 3.66 44.35 3.09
2215 3018 3.538634 AAAGGTCGTCCTACATAAGCC 57.461 47.619 0.37 0.00 44.35 4.35
2216 3019 1.411041 AGGTCGTCCTACATAAGCCC 58.589 55.000 0.00 0.00 43.12 5.19
2217 3020 1.063114 AGGTCGTCCTACATAAGCCCT 60.063 52.381 0.00 0.00 43.12 5.19
2218 3021 1.761198 GGTCGTCCTACATAAGCCCTT 59.239 52.381 0.00 0.00 0.00 3.95
2219 3022 2.223994 GGTCGTCCTACATAAGCCCTTC 60.224 54.545 0.00 0.00 0.00 3.46
2220 3023 1.679680 TCGTCCTACATAAGCCCTTCG 59.320 52.381 0.00 0.00 0.00 3.79
2221 3024 1.407979 CGTCCTACATAAGCCCTTCGT 59.592 52.381 0.00 0.00 0.00 3.85
2222 3025 2.543238 CGTCCTACATAAGCCCTTCGTC 60.543 54.545 0.00 0.00 0.00 4.20
2223 3026 2.037144 TCCTACATAAGCCCTTCGTCC 58.963 52.381 0.00 0.00 0.00 4.79
2224 3027 1.760613 CCTACATAAGCCCTTCGTCCA 59.239 52.381 0.00 0.00 0.00 4.02
2225 3028 2.483188 CCTACATAAGCCCTTCGTCCAC 60.483 54.545 0.00 0.00 0.00 4.02
2226 3029 0.252197 ACATAAGCCCTTCGTCCACC 59.748 55.000 0.00 0.00 0.00 4.61
2227 3030 0.541863 CATAAGCCCTTCGTCCACCT 59.458 55.000 0.00 0.00 0.00 4.00
2228 3031 0.541863 ATAAGCCCTTCGTCCACCTG 59.458 55.000 0.00 0.00 0.00 4.00
2229 3032 0.543410 TAAGCCCTTCGTCCACCTGA 60.543 55.000 0.00 0.00 0.00 3.86
2230 3033 1.831652 AAGCCCTTCGTCCACCTGAG 61.832 60.000 0.00 0.00 0.00 3.35
2231 3034 2.266055 CCCTTCGTCCACCTGAGC 59.734 66.667 0.00 0.00 0.00 4.26
2232 3035 2.286523 CCCTTCGTCCACCTGAGCT 61.287 63.158 0.00 0.00 0.00 4.09
2233 3036 1.216710 CCTTCGTCCACCTGAGCTC 59.783 63.158 6.82 6.82 0.00 4.09
2234 3037 1.153939 CTTCGTCCACCTGAGCTCG 60.154 63.158 9.64 3.88 0.00 5.03
2235 3038 2.549611 CTTCGTCCACCTGAGCTCGG 62.550 65.000 16.14 16.14 0.00 4.63
2236 3039 3.374402 CGTCCACCTGAGCTCGGT 61.374 66.667 21.06 20.54 34.38 4.69
2237 3040 2.574399 GTCCACCTGAGCTCGGTC 59.426 66.667 22.16 11.44 30.82 4.79
2238 3041 1.979693 GTCCACCTGAGCTCGGTCT 60.980 63.158 22.16 5.82 30.82 3.85
2239 3042 1.979155 TCCACCTGAGCTCGGTCTG 60.979 63.158 22.16 15.91 30.82 3.51
2240 3043 2.279069 CCACCTGAGCTCGGTCTGT 61.279 63.158 22.16 11.28 30.82 3.41
2241 3044 1.668294 CACCTGAGCTCGGTCTGTT 59.332 57.895 22.16 3.75 30.82 3.16
2242 3045 0.389166 CACCTGAGCTCGGTCTGTTC 60.389 60.000 22.16 0.00 30.82 3.18
2243 3046 0.540830 ACCTGAGCTCGGTCTGTTCT 60.541 55.000 21.06 0.00 0.00 3.01
2244 3047 0.605589 CCTGAGCTCGGTCTGTTCTT 59.394 55.000 21.06 0.00 0.00 2.52
2245 3048 1.403514 CCTGAGCTCGGTCTGTTCTTC 60.404 57.143 21.06 0.00 0.00 2.87
2246 3049 0.603569 TGAGCTCGGTCTGTTCTTCC 59.396 55.000 9.64 0.00 0.00 3.46
2247 3050 0.108567 GAGCTCGGTCTGTTCTTCCC 60.109 60.000 0.00 0.00 0.00 3.97
2248 3051 1.079057 GCTCGGTCTGTTCTTCCCC 60.079 63.158 0.00 0.00 0.00 4.81
2249 3052 1.545706 GCTCGGTCTGTTCTTCCCCT 61.546 60.000 0.00 0.00 0.00 4.79
2250 3053 0.977395 CTCGGTCTGTTCTTCCCCTT 59.023 55.000 0.00 0.00 0.00 3.95
2251 3054 1.348036 CTCGGTCTGTTCTTCCCCTTT 59.652 52.381 0.00 0.00 0.00 3.11
2252 3055 1.346722 TCGGTCTGTTCTTCCCCTTTC 59.653 52.381 0.00 0.00 0.00 2.62
2253 3056 1.610886 CGGTCTGTTCTTCCCCTTTCC 60.611 57.143 0.00 0.00 0.00 3.13
2254 3057 1.271982 GGTCTGTTCTTCCCCTTTCCC 60.272 57.143 0.00 0.00 0.00 3.97
2255 3058 1.073098 TCTGTTCTTCCCCTTTCCCC 58.927 55.000 0.00 0.00 0.00 4.81
2256 3059 1.076438 CTGTTCTTCCCCTTTCCCCT 58.924 55.000 0.00 0.00 0.00 4.79
2257 3060 1.004862 CTGTTCTTCCCCTTTCCCCTC 59.995 57.143 0.00 0.00 0.00 4.30
2258 3061 1.373536 GTTCTTCCCCTTTCCCCTCT 58.626 55.000 0.00 0.00 0.00 3.69
2259 3062 1.282447 GTTCTTCCCCTTTCCCCTCTC 59.718 57.143 0.00 0.00 0.00 3.20
2260 3063 0.253207 TCTTCCCCTTTCCCCTCTCC 60.253 60.000 0.00 0.00 0.00 3.71
2261 3064 0.253394 CTTCCCCTTTCCCCTCTCCT 60.253 60.000 0.00 0.00 0.00 3.69
2262 3065 0.253207 TTCCCCTTTCCCCTCTCCTC 60.253 60.000 0.00 0.00 0.00 3.71
2263 3066 1.162951 TCCCCTTTCCCCTCTCCTCT 61.163 60.000 0.00 0.00 0.00 3.69
2264 3067 0.692756 CCCCTTTCCCCTCTCCTCTC 60.693 65.000 0.00 0.00 0.00 3.20
2265 3068 0.341609 CCCTTTCCCCTCTCCTCTCT 59.658 60.000 0.00 0.00 0.00 3.10
2266 3069 1.494960 CCTTTCCCCTCTCCTCTCTG 58.505 60.000 0.00 0.00 0.00 3.35
2267 3070 1.273552 CCTTTCCCCTCTCCTCTCTGT 60.274 57.143 0.00 0.00 0.00 3.41
2268 3071 2.545810 CTTTCCCCTCTCCTCTCTGTT 58.454 52.381 0.00 0.00 0.00 3.16
2269 3072 2.239681 TTCCCCTCTCCTCTCTGTTC 57.760 55.000 0.00 0.00 0.00 3.18
2270 3073 1.388174 TCCCCTCTCCTCTCTGTTCT 58.612 55.000 0.00 0.00 0.00 3.01
2271 3074 1.719378 TCCCCTCTCCTCTCTGTTCTT 59.281 52.381 0.00 0.00 0.00 2.52
2272 3075 2.107366 CCCCTCTCCTCTCTGTTCTTC 58.893 57.143 0.00 0.00 0.00 2.87
2273 3076 2.107366 CCCTCTCCTCTCTGTTCTTCC 58.893 57.143 0.00 0.00 0.00 3.46
2274 3077 2.107366 CCTCTCCTCTCTGTTCTTCCC 58.893 57.143 0.00 0.00 0.00 3.97
2275 3078 2.107366 CTCTCCTCTCTGTTCTTCCCC 58.893 57.143 0.00 0.00 0.00 4.81
2276 3079 1.719378 TCTCCTCTCTGTTCTTCCCCT 59.281 52.381 0.00 0.00 0.00 4.79
2277 3080 2.107366 CTCCTCTCTGTTCTTCCCCTC 58.893 57.143 0.00 0.00 0.00 4.30
2278 3081 1.719378 TCCTCTCTGTTCTTCCCCTCT 59.281 52.381 0.00 0.00 0.00 3.69
2279 3082 2.112691 TCCTCTCTGTTCTTCCCCTCTT 59.887 50.000 0.00 0.00 0.00 2.85
2280 3083 2.499693 CCTCTCTGTTCTTCCCCTCTTC 59.500 54.545 0.00 0.00 0.00 2.87
2281 3084 2.499693 CTCTCTGTTCTTCCCCTCTTCC 59.500 54.545 0.00 0.00 0.00 3.46
2282 3085 2.112691 TCTCTGTTCTTCCCCTCTTCCT 59.887 50.000 0.00 0.00 0.00 3.36
2283 3086 2.499693 CTCTGTTCTTCCCCTCTTCCTC 59.500 54.545 0.00 0.00 0.00 3.71
2284 3087 2.112691 TCTGTTCTTCCCCTCTTCCTCT 59.887 50.000 0.00 0.00 0.00 3.69
2285 3088 2.499693 CTGTTCTTCCCCTCTTCCTCTC 59.500 54.545 0.00 0.00 0.00 3.20
2286 3089 1.478916 GTTCTTCCCCTCTTCCTCTCG 59.521 57.143 0.00 0.00 0.00 4.04
2287 3090 1.000496 TCTTCCCCTCTTCCTCTCGA 59.000 55.000 0.00 0.00 0.00 4.04
2288 3091 1.064314 TCTTCCCCTCTTCCTCTCGAG 60.064 57.143 5.93 5.93 0.00 4.04
2289 3092 0.684805 TTCCCCTCTTCCTCTCGAGC 60.685 60.000 7.81 0.00 0.00 5.03
2290 3093 1.076339 CCCCTCTTCCTCTCGAGCT 60.076 63.158 7.81 0.00 0.00 4.09
2291 3094 1.106944 CCCCTCTTCCTCTCGAGCTC 61.107 65.000 7.81 2.73 0.00 4.09
2292 3095 0.395036 CCCTCTTCCTCTCGAGCTCA 60.395 60.000 15.40 0.00 0.00 4.26
2293 3096 1.691196 CCTCTTCCTCTCGAGCTCAT 58.309 55.000 15.40 0.00 0.00 2.90
2294 3097 1.608590 CCTCTTCCTCTCGAGCTCATC 59.391 57.143 15.40 0.00 0.00 2.92
2295 3098 2.296792 CTCTTCCTCTCGAGCTCATCA 58.703 52.381 15.40 0.00 0.00 3.07
2296 3099 2.020720 TCTTCCTCTCGAGCTCATCAC 58.979 52.381 15.40 0.00 0.00 3.06
2297 3100 1.747924 CTTCCTCTCGAGCTCATCACA 59.252 52.381 15.40 0.00 0.00 3.58
2298 3101 1.098869 TCCTCTCGAGCTCATCACAC 58.901 55.000 15.40 0.00 0.00 3.82
2299 3102 0.813821 CCTCTCGAGCTCATCACACA 59.186 55.000 15.40 0.00 0.00 3.72
2300 3103 1.408340 CCTCTCGAGCTCATCACACAT 59.592 52.381 15.40 0.00 0.00 3.21
2301 3104 2.159128 CCTCTCGAGCTCATCACACATT 60.159 50.000 15.40 0.00 0.00 2.71
2302 3105 3.519579 CTCTCGAGCTCATCACACATTT 58.480 45.455 15.40 0.00 0.00 2.32
2303 3106 3.930336 TCTCGAGCTCATCACACATTTT 58.070 40.909 15.40 0.00 0.00 1.82
2304 3107 3.681417 TCTCGAGCTCATCACACATTTTG 59.319 43.478 15.40 0.00 0.00 2.44
2305 3108 2.160219 TCGAGCTCATCACACATTTTGC 59.840 45.455 15.40 0.00 0.00 3.68
2306 3109 2.730090 CGAGCTCATCACACATTTTGCC 60.730 50.000 15.40 0.00 0.00 4.52
2307 3110 1.547372 AGCTCATCACACATTTTGCCC 59.453 47.619 0.00 0.00 0.00 5.36
2308 3111 1.273048 GCTCATCACACATTTTGCCCA 59.727 47.619 0.00 0.00 0.00 5.36
2309 3112 2.288948 GCTCATCACACATTTTGCCCAA 60.289 45.455 0.00 0.00 0.00 4.12
2310 3113 3.803021 GCTCATCACACATTTTGCCCAAA 60.803 43.478 0.00 0.00 0.00 3.28
2311 3114 4.378774 CTCATCACACATTTTGCCCAAAA 58.621 39.130 8.45 8.45 43.48 2.44
2313 3116 5.374921 TCATCACACATTTTGCCCAAAATT 58.625 33.333 14.45 6.01 45.67 1.82
2314 3117 5.826737 TCATCACACATTTTGCCCAAAATTT 59.173 32.000 14.45 7.56 45.67 1.82
2315 3118 5.496133 TCACACATTTTGCCCAAAATTTG 57.504 34.783 21.73 21.73 45.67 2.32
2318 3121 5.496133 CACATTTTGCCCAAAATTTGTCA 57.504 34.783 17.88 0.00 45.67 3.58
2319 3122 5.888105 CACATTTTGCCCAAAATTTGTCAA 58.112 33.333 17.88 5.88 45.67 3.18
2320 3123 5.972382 CACATTTTGCCCAAAATTTGTCAAG 59.028 36.000 17.88 9.04 45.67 3.02
2321 3124 5.884792 ACATTTTGCCCAAAATTTGTCAAGA 59.115 32.000 14.45 4.72 45.67 3.02
2322 3125 6.546772 ACATTTTGCCCAAAATTTGTCAAGAT 59.453 30.769 14.45 6.57 45.67 2.40
2323 3126 7.068470 ACATTTTGCCCAAAATTTGTCAAGATT 59.932 29.630 14.45 0.35 45.67 2.40
2324 3127 7.401955 TTTTGCCCAAAATTTGTCAAGATTT 57.598 28.000 4.92 0.00 35.57 2.17
2325 3128 6.374565 TTGCCCAAAATTTGTCAAGATTTG 57.625 33.333 4.92 13.93 0.00 2.32
2326 3129 5.678583 TGCCCAAAATTTGTCAAGATTTGA 58.321 33.333 19.08 4.79 37.33 2.69
2327 3130 6.118170 TGCCCAAAATTTGTCAAGATTTGAA 58.882 32.000 19.08 7.98 42.15 2.69
2328 3131 6.260493 TGCCCAAAATTTGTCAAGATTTGAAG 59.740 34.615 19.08 13.60 42.15 3.02
2329 3132 6.293571 GCCCAAAATTTGTCAAGATTTGAAGG 60.294 38.462 19.08 15.15 42.15 3.46
2330 3133 6.293571 CCCAAAATTTGTCAAGATTTGAAGGC 60.294 38.462 19.08 0.00 42.15 4.35
2331 3134 6.293571 CCAAAATTTGTCAAGATTTGAAGGCC 60.294 38.462 19.08 0.00 42.15 5.19
2332 3135 4.541973 ATTTGTCAAGATTTGAAGGCCC 57.458 40.909 0.00 0.00 42.15 5.80
2333 3136 1.923356 TGTCAAGATTTGAAGGCCCC 58.077 50.000 0.00 0.00 42.15 5.80
2334 3137 1.146774 TGTCAAGATTTGAAGGCCCCA 59.853 47.619 0.00 0.00 42.15 4.96
2335 3138 2.225343 TGTCAAGATTTGAAGGCCCCAT 60.225 45.455 0.00 0.00 42.15 4.00
2336 3139 2.428530 GTCAAGATTTGAAGGCCCCATC 59.571 50.000 0.00 0.00 42.15 3.51
2337 3140 1.758862 CAAGATTTGAAGGCCCCATCC 59.241 52.381 0.00 0.00 0.00 3.51
2338 3141 1.009997 AGATTTGAAGGCCCCATCCA 58.990 50.000 0.00 0.00 0.00 3.41
2339 3142 1.577242 AGATTTGAAGGCCCCATCCAT 59.423 47.619 0.00 0.00 0.00 3.41
2340 3143 2.022722 AGATTTGAAGGCCCCATCCATT 60.023 45.455 0.00 0.00 0.00 3.16
2341 3144 1.864669 TTTGAAGGCCCCATCCATTC 58.135 50.000 0.00 0.00 0.00 2.67
2342 3145 0.709397 TTGAAGGCCCCATCCATTCA 59.291 50.000 0.00 0.00 0.00 2.57
2343 3146 0.709397 TGAAGGCCCCATCCATTCAA 59.291 50.000 0.00 0.00 0.00 2.69
2344 3147 1.078490 TGAAGGCCCCATCCATTCAAA 59.922 47.619 0.00 0.00 0.00 2.69
2345 3148 2.187100 GAAGGCCCCATCCATTCAAAA 58.813 47.619 0.00 0.00 0.00 2.44
2346 3149 2.574074 AGGCCCCATCCATTCAAAAT 57.426 45.000 0.00 0.00 0.00 1.82
2347 3150 2.121129 AGGCCCCATCCATTCAAAATG 58.879 47.619 0.00 0.00 0.00 2.32
2348 3151 2.117865 GGCCCCATCCATTCAAAATGA 58.882 47.619 0.00 0.00 0.00 2.57
2349 3152 2.707257 GGCCCCATCCATTCAAAATGAT 59.293 45.455 0.00 0.00 0.00 2.45
2350 3153 3.244318 GGCCCCATCCATTCAAAATGATC 60.244 47.826 0.00 0.00 0.00 2.92
2351 3154 3.388676 GCCCCATCCATTCAAAATGATCA 59.611 43.478 0.00 0.00 0.00 2.92
2352 3155 4.741536 GCCCCATCCATTCAAAATGATCAC 60.742 45.833 0.00 0.00 0.00 3.06
2353 3156 4.406326 CCCCATCCATTCAAAATGATCACA 59.594 41.667 0.00 0.00 0.00 3.58
2354 3157 5.104859 CCCCATCCATTCAAAATGATCACAA 60.105 40.000 0.00 0.00 0.00 3.33
2355 3158 6.408035 CCCATCCATTCAAAATGATCACAAA 58.592 36.000 0.00 0.00 0.00 2.83
2356 3159 6.537301 CCCATCCATTCAAAATGATCACAAAG 59.463 38.462 0.00 0.00 0.00 2.77
2357 3160 6.537301 CCATCCATTCAAAATGATCACAAAGG 59.463 38.462 0.00 0.00 0.00 3.11
2358 3161 6.669125 TCCATTCAAAATGATCACAAAGGT 57.331 33.333 0.00 0.00 0.00 3.50
2359 3162 7.065120 TCCATTCAAAATGATCACAAAGGTT 57.935 32.000 0.00 0.00 0.00 3.50
2360 3163 8.187913 TCCATTCAAAATGATCACAAAGGTTA 57.812 30.769 0.00 0.00 0.00 2.85
2361 3164 8.306038 TCCATTCAAAATGATCACAAAGGTTAG 58.694 33.333 0.00 0.00 0.00 2.34
2362 3165 7.063780 CCATTCAAAATGATCACAAAGGTTAGC 59.936 37.037 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.439507 TCTCTGCCCACACTTTTTCTCT 59.560 45.455 0.00 0.00 0.00 3.10
47 49 1.587054 CAAGTTCGGCTCCGTCTCT 59.413 57.895 8.28 3.09 40.74 3.10
57 59 0.165944 GGTTGACATCGCAAGTTCGG 59.834 55.000 0.00 0.00 39.48 4.30
66 68 2.213499 GCTATGGGAAGGTTGACATCG 58.787 52.381 0.00 0.00 0.00 3.84
70 72 1.429148 CGCGCTATGGGAAGGTTGAC 61.429 60.000 5.56 0.00 0.00 3.18
85 87 3.849953 CTAGTTGTTCGCCCGCGC 61.850 66.667 0.00 0.00 39.59 6.86
173 178 5.006358 GCTTCGCGAACTGGAGAAATAATAA 59.994 40.000 19.38 0.00 0.00 1.40
214 219 7.665561 ATTAAATGAAAAACGGTTTGGGATG 57.334 32.000 6.92 0.00 0.00 3.51
486 509 9.447157 TTTTGGAAAAAGTTCATCAGTTTTGAT 57.553 25.926 0.00 0.00 44.87 2.57
493 516 8.500773 CCATCAATTTTGGAAAAAGTTCATCAG 58.499 33.333 0.00 0.00 36.26 2.90
514 537 7.656412 TCATCGATTTTGAAAACTTTCCATCA 58.344 30.769 0.00 0.00 36.36 3.07
515 538 8.519492 TTCATCGATTTTGAAAACTTTCCATC 57.481 30.769 0.00 0.00 36.36 3.51
521 544 9.971744 CAAAAACTTCATCGATTTTGAAAACTT 57.028 25.926 12.21 0.18 42.48 2.66
523 546 9.408731 GACAAAAACTTCATCGATTTTGAAAAC 57.591 29.630 20.62 9.29 42.48 2.43
527 550 6.800543 TGGACAAAAACTTCATCGATTTTGA 58.199 32.000 20.62 5.06 42.48 2.69
533 556 7.038154 AGATTTTGGACAAAAACTTCATCGA 57.962 32.000 13.48 0.00 42.71 3.59
577 600 9.941325 AGTGCACAAATTTGGAAAATATCATTA 57.059 25.926 21.04 0.00 0.00 1.90
578 601 8.851541 AGTGCACAAATTTGGAAAATATCATT 57.148 26.923 21.04 2.83 0.00 2.57
579 602 8.851541 AAGTGCACAAATTTGGAAAATATCAT 57.148 26.923 21.04 0.00 0.00 2.45
580 603 8.674263 AAAGTGCACAAATTTGGAAAATATCA 57.326 26.923 21.04 5.30 0.00 2.15
593 616 8.715191 TCAATTTTGAAGTAAAGTGCACAAAT 57.285 26.923 21.04 9.67 34.18 2.32
597 620 7.928908 TCATCAATTTTGAAGTAAAGTGCAC 57.071 32.000 9.40 9.40 41.13 4.57
628 651 9.157104 GAAAAAGGTATGTCAAGTTTGGAAAAA 57.843 29.630 0.00 0.00 0.00 1.94
629 652 8.314751 TGAAAAAGGTATGTCAAGTTTGGAAAA 58.685 29.630 0.00 0.00 0.00 2.29
630 653 7.762159 GTGAAAAAGGTATGTCAAGTTTGGAAA 59.238 33.333 0.00 0.00 0.00 3.13
631 654 7.123547 AGTGAAAAAGGTATGTCAAGTTTGGAA 59.876 33.333 0.00 0.00 0.00 3.53
632 655 6.605594 AGTGAAAAAGGTATGTCAAGTTTGGA 59.394 34.615 0.00 0.00 0.00 3.53
633 656 6.805713 AGTGAAAAAGGTATGTCAAGTTTGG 58.194 36.000 0.00 0.00 0.00 3.28
634 657 8.702163 AAAGTGAAAAAGGTATGTCAAGTTTG 57.298 30.769 0.00 0.00 0.00 2.93
635 658 9.366216 GAAAAGTGAAAAAGGTATGTCAAGTTT 57.634 29.630 0.00 0.00 0.00 2.66
636 659 8.749354 AGAAAAGTGAAAAAGGTATGTCAAGTT 58.251 29.630 0.00 0.00 0.00 2.66
637 660 8.293699 AGAAAAGTGAAAAAGGTATGTCAAGT 57.706 30.769 0.00 0.00 0.00 3.16
638 661 9.237846 GAAGAAAAGTGAAAAAGGTATGTCAAG 57.762 33.333 0.00 0.00 0.00 3.02
639 662 8.744652 TGAAGAAAAGTGAAAAAGGTATGTCAA 58.255 29.630 0.00 0.00 0.00 3.18
640 663 8.287439 TGAAGAAAAGTGAAAAAGGTATGTCA 57.713 30.769 0.00 0.00 0.00 3.58
641 664 9.581099 TTTGAAGAAAAGTGAAAAAGGTATGTC 57.419 29.630 0.00 0.00 0.00 3.06
642 665 9.936759 TTTTGAAGAAAAGTGAAAAAGGTATGT 57.063 25.926 0.00 0.00 0.00 2.29
685 708 6.019779 TGAAAAAGGTATGTCGATTTTGGG 57.980 37.500 0.00 0.00 0.00 4.12
855 895 7.962934 TGGATTCGCAATAAAAATAAGTTCG 57.037 32.000 0.00 0.00 0.00 3.95
862 902 9.603921 AAAAGATCATGGATTCGCAATAAAAAT 57.396 25.926 0.00 0.00 0.00 1.82
901 941 8.388853 GTTTGCTTCTACTTACCACTAAATAGC 58.611 37.037 0.00 0.00 0.00 2.97
903 943 7.063780 GCGTTTGCTTCTACTTACCACTAAATA 59.936 37.037 0.00 0.00 38.39 1.40
932 972 1.202734 CGGATCAGGGAATGCAGTGAT 60.203 52.381 0.00 0.00 32.24 3.06
935 975 0.911769 TTCGGATCAGGGAATGCAGT 59.088 50.000 0.00 0.00 0.00 4.40
945 985 5.665459 AGGTAGTTCTGAATTTCGGATCAG 58.335 41.667 15.39 1.50 43.51 2.90
952 992 9.877178 TCTATTCTTGAGGTAGTTCTGAATTTC 57.123 33.333 0.00 0.00 0.00 2.17
974 1014 5.590663 TCTCTACACACGCTTGATTCTCTAT 59.409 40.000 0.00 0.00 0.00 1.98
979 1019 3.575630 TGTCTCTACACACGCTTGATTC 58.424 45.455 0.00 0.00 0.00 2.52
992 1032 1.339055 TGCAGGTTGCCATGTCTCTAC 60.339 52.381 0.00 0.00 44.23 2.59
999 1039 0.458669 GGAATCTGCAGGTTGCCATG 59.541 55.000 19.03 0.00 44.23 3.66
1010 1050 0.745845 ACAGGCGATGTGGAATCTGC 60.746 55.000 0.00 0.00 41.91 4.26
1032 1072 0.324460 ACTTACAGACGAGGAGGGGG 60.324 60.000 0.00 0.00 0.00 5.40
1044 1084 6.287589 AGAATTGGACCTGTCTACTTACAG 57.712 41.667 0.00 0.00 45.33 2.74
1083 1123 5.698832 CATGAGTTGCTATGGTTCGAAAAA 58.301 37.500 0.00 0.00 0.00 1.94
1084 1124 5.295431 CATGAGTTGCTATGGTTCGAAAA 57.705 39.130 0.00 0.00 0.00 2.29
1085 1125 4.944962 CATGAGTTGCTATGGTTCGAAA 57.055 40.909 0.00 0.00 0.00 3.46
1098 1138 8.712285 ATAAATCCATTTCAAAGCATGAGTTG 57.288 30.769 0.00 0.00 39.77 3.16
1100 1140 9.193806 ACTATAAATCCATTTCAAAGCATGAGT 57.806 29.630 0.00 0.00 39.77 3.41
1131 1171 9.100554 CCACGAACCACAGTTATACATATAAAA 57.899 33.333 0.00 0.00 35.94 1.52
1132 1172 8.476447 TCCACGAACCACAGTTATACATATAAA 58.524 33.333 0.00 0.00 35.94 1.40
1133 1173 8.009622 TCCACGAACCACAGTTATACATATAA 57.990 34.615 0.00 0.00 35.94 0.98
1134 1174 7.585579 TCCACGAACCACAGTTATACATATA 57.414 36.000 0.00 0.00 35.94 0.86
1141 1181 4.280436 TGAATCCACGAACCACAGTTAT 57.720 40.909 0.00 0.00 35.94 1.89
1145 1185 2.426522 ACATGAATCCACGAACCACAG 58.573 47.619 0.00 0.00 0.00 3.66
1150 1190 4.876107 ACCTGAATACATGAATCCACGAAC 59.124 41.667 0.00 0.00 0.00 3.95
1152 1192 4.081142 ACACCTGAATACATGAATCCACGA 60.081 41.667 0.00 0.00 0.00 4.35
1153 1193 4.191544 ACACCTGAATACATGAATCCACG 58.808 43.478 0.00 0.00 0.00 4.94
1164 1204 2.353889 CAGCAGCATGACACCTGAATAC 59.646 50.000 0.00 0.00 39.69 1.89
1171 1211 0.895100 TTTCCCAGCAGCATGACACC 60.895 55.000 0.00 0.00 39.69 4.16
1189 1229 3.055602 GCTTCCATGCCCTCTTGATTTTT 60.056 43.478 0.00 0.00 0.00 1.94
1227 1267 0.889306 AGTCGACTTCCAGGCAGTAC 59.111 55.000 13.58 0.00 0.00 2.73
1229 1269 0.889306 GTAGTCGACTTCCAGGCAGT 59.111 55.000 25.44 0.00 0.00 4.40
1230 1270 0.888619 TGTAGTCGACTTCCAGGCAG 59.111 55.000 25.44 0.00 0.00 4.85
1231 1271 1.557099 ATGTAGTCGACTTCCAGGCA 58.443 50.000 25.44 13.11 0.00 4.75
1365 1405 7.490962 TGAAGTTACAACAATACCTCAACTG 57.509 36.000 0.00 0.00 0.00 3.16
1366 1406 7.719633 ACATGAAGTTACAACAATACCTCAACT 59.280 33.333 0.00 0.00 0.00 3.16
1395 1435 9.428097 ACACGTTCATACATATACTCTATACGA 57.572 33.333 0.00 0.00 0.00 3.43
1405 1445 8.217131 AGTACAGACACACGTTCATACATATA 57.783 34.615 0.00 0.00 0.00 0.86
1406 1446 7.096884 AGTACAGACACACGTTCATACATAT 57.903 36.000 0.00 0.00 0.00 1.78
1449 1491 7.415206 GCCAATCTTATTTCTTGTACCGTCAAT 60.415 37.037 0.00 0.00 0.00 2.57
1453 1495 4.331717 CGCCAATCTTATTTCTTGTACCGT 59.668 41.667 0.00 0.00 0.00 4.83
1565 2332 1.276421 TCTAAAGCACTCCTGCACCTC 59.724 52.381 0.00 0.00 46.97 3.85
1566 2333 1.352083 TCTAAAGCACTCCTGCACCT 58.648 50.000 0.00 0.00 46.97 4.00
1567 2334 2.409948 ATCTAAAGCACTCCTGCACC 57.590 50.000 0.00 0.00 46.97 5.01
1568 2335 3.311048 GCTAATCTAAAGCACTCCTGCAC 59.689 47.826 0.00 0.00 46.97 4.57
1586 2362 3.381045 CAGCTCGTTAATCCATCGCTAA 58.619 45.455 0.00 0.00 0.00 3.09
1590 2366 1.858091 AGCAGCTCGTTAATCCATCG 58.142 50.000 0.00 0.00 0.00 3.84
1604 2380 1.264288 AGCGTTAACAAGTCAAGCAGC 59.736 47.619 6.39 0.00 0.00 5.25
1610 2386 2.792674 CGAGTCAAGCGTTAACAAGTCA 59.207 45.455 6.39 0.00 0.00 3.41
1612 2388 2.817901 ACGAGTCAAGCGTTAACAAGT 58.182 42.857 6.39 0.00 39.18 3.16
1625 2401 2.984471 GCATAACGAGTTGAACGAGTCA 59.016 45.455 0.00 0.00 34.70 3.41
1655 2431 2.106511 ACAGAGCAAGCAGGGTTTTCTA 59.893 45.455 0.00 0.00 0.00 2.10
1662 2438 1.035139 AACAAACAGAGCAAGCAGGG 58.965 50.000 0.00 0.00 0.00 4.45
1664 2440 3.425577 TCAAACAAACAGAGCAAGCAG 57.574 42.857 0.00 0.00 0.00 4.24
1678 2454 5.348179 TCACGAGTTTAACGAGTTTCAAACA 59.652 36.000 2.41 0.00 34.15 2.83
1690 2466 0.362512 CGAGCGCTCACGAGTTTAAC 59.637 55.000 34.69 6.24 43.93 2.01
1734 2510 8.943085 ACCTCAGACCATCTATTCAATCTAATT 58.057 33.333 0.00 0.00 0.00 1.40
1757 2533 3.671008 TGACAACATTACGTAGCACCT 57.329 42.857 0.00 0.00 0.00 4.00
1767 2543 8.522003 ACATTTCTACATTGCATGACAACATTA 58.478 29.630 0.00 0.00 42.27 1.90
1799 2575 7.321153 ACTCATTAAGCTCGTTAGTACAACAT 58.679 34.615 0.00 0.00 0.00 2.71
1800 2576 6.684686 ACTCATTAAGCTCGTTAGTACAACA 58.315 36.000 0.00 0.00 0.00 3.33
1801 2577 7.445836 CAACTCATTAAGCTCGTTAGTACAAC 58.554 38.462 0.00 0.00 0.00 3.32
1826 2602 3.244579 ACGAGTTAACGAGTTTCACAAGC 59.755 43.478 0.00 0.00 37.03 4.01
1843 2619 1.529865 GGCAAAGCTTAACGAACGAGT 59.470 47.619 0.00 0.00 0.00 4.18
1847 2623 3.297830 AATGGGCAAAGCTTAACGAAC 57.702 42.857 0.00 0.00 0.00 3.95
1887 2689 2.028190 CGCCCCTGATGAGCGTAG 59.972 66.667 0.00 0.00 44.65 3.51
1923 2725 3.580022 TGATCATATGCTAGGACACCAGG 59.420 47.826 0.00 0.00 0.00 4.45
1925 2727 4.226384 AGTGATCATATGCTAGGACACCA 58.774 43.478 0.00 0.00 0.00 4.17
1952 2754 7.175990 GTGTGACACCCCATCTTTAGATAAAAA 59.824 37.037 3.92 0.00 32.63 1.94
1984 2787 6.981762 TCCTTTGTAAGTTTCACGTGTAAA 57.018 33.333 16.51 11.71 0.00 2.01
1988 2791 5.632959 TGTTTCCTTTGTAAGTTTCACGTG 58.367 37.500 9.94 9.94 0.00 4.49
1991 2794 6.695713 GTGGATGTTTCCTTTGTAAGTTTCAC 59.304 38.462 0.00 0.00 43.07 3.18
2011 2814 8.971073 CATTTGACCCTTTTTCTAATAGTGGAT 58.029 33.333 0.00 0.00 0.00 3.41
2012 2815 7.947890 ACATTTGACCCTTTTTCTAATAGTGGA 59.052 33.333 0.00 0.00 0.00 4.02
2013 2816 8.122472 ACATTTGACCCTTTTTCTAATAGTGG 57.878 34.615 0.00 0.00 0.00 4.00
2014 2817 8.792633 TGACATTTGACCCTTTTTCTAATAGTG 58.207 33.333 0.00 0.00 0.00 2.74
2015 2818 8.934023 TGACATTTGACCCTTTTTCTAATAGT 57.066 30.769 0.00 0.00 0.00 2.12
2016 2819 9.846248 CTTGACATTTGACCCTTTTTCTAATAG 57.154 33.333 0.00 0.00 0.00 1.73
2017 2820 8.303876 GCTTGACATTTGACCCTTTTTCTAATA 58.696 33.333 0.00 0.00 0.00 0.98
2018 2821 7.154656 GCTTGACATTTGACCCTTTTTCTAAT 58.845 34.615 0.00 0.00 0.00 1.73
2019 2822 6.097554 TGCTTGACATTTGACCCTTTTTCTAA 59.902 34.615 0.00 0.00 0.00 2.10
2020 2823 5.596361 TGCTTGACATTTGACCCTTTTTCTA 59.404 36.000 0.00 0.00 0.00 2.10
2021 2824 4.405358 TGCTTGACATTTGACCCTTTTTCT 59.595 37.500 0.00 0.00 0.00 2.52
2022 2825 4.507756 GTGCTTGACATTTGACCCTTTTTC 59.492 41.667 0.00 0.00 0.00 2.29
2023 2826 4.081198 TGTGCTTGACATTTGACCCTTTTT 60.081 37.500 0.00 0.00 0.00 1.94
2024 2827 3.450457 TGTGCTTGACATTTGACCCTTTT 59.550 39.130 0.00 0.00 0.00 2.27
2025 2828 3.030291 TGTGCTTGACATTTGACCCTTT 58.970 40.909 0.00 0.00 0.00 3.11
2026 2829 2.665165 TGTGCTTGACATTTGACCCTT 58.335 42.857 0.00 0.00 0.00 3.95
2027 2830 2.363306 TGTGCTTGACATTTGACCCT 57.637 45.000 0.00 0.00 0.00 4.34
2044 2847 4.336993 TCAAAAGCAAACCGACACTAATGT 59.663 37.500 0.00 0.00 43.71 2.71
2045 2848 4.854399 TCAAAAGCAAACCGACACTAATG 58.146 39.130 0.00 0.00 0.00 1.90
2046 2849 5.108385 CTCAAAAGCAAACCGACACTAAT 57.892 39.130 0.00 0.00 0.00 1.73
2047 2850 4.545823 CTCAAAAGCAAACCGACACTAA 57.454 40.909 0.00 0.00 0.00 2.24
2061 2864 1.812571 ACATTAGTGCCGGCTCAAAAG 59.187 47.619 29.70 16.92 0.00 2.27
2062 2865 1.539388 CACATTAGTGCCGGCTCAAAA 59.461 47.619 29.70 21.42 39.21 2.44
2063 2866 1.164411 CACATTAGTGCCGGCTCAAA 58.836 50.000 29.70 18.42 39.21 2.69
2064 2867 2.853159 CACATTAGTGCCGGCTCAA 58.147 52.632 29.70 19.77 39.21 3.02
2065 2868 4.615901 CACATTAGTGCCGGCTCA 57.384 55.556 29.70 9.72 39.21 4.26
2085 2888 0.446222 CGTTGGAACCGGCACTAATG 59.554 55.000 0.00 1.62 0.00 1.90
2086 2889 0.675522 CCGTTGGAACCGGCACTAAT 60.676 55.000 0.00 0.00 38.85 1.73
2087 2890 1.301874 CCGTTGGAACCGGCACTAA 60.302 57.895 0.00 0.00 38.85 2.24
2088 2891 2.344500 CCGTTGGAACCGGCACTA 59.656 61.111 0.00 0.00 38.85 2.74
2094 2897 2.818274 GGCTAGCCGTTGGAACCG 60.818 66.667 20.16 0.00 0.00 4.44
2095 2898 1.745489 CTGGCTAGCCGTTGGAACC 60.745 63.158 28.28 1.95 39.42 3.62
2096 2899 2.399356 GCTGGCTAGCCGTTGGAAC 61.399 63.158 28.28 8.76 44.33 3.62
2097 2900 2.046314 GCTGGCTAGCCGTTGGAA 60.046 61.111 28.28 9.18 44.33 3.53
2109 2912 1.330829 GTACTAATGAAAGCGGCTGGC 59.669 52.381 1.81 0.00 44.05 4.85
2110 2913 1.940613 GGTACTAATGAAAGCGGCTGG 59.059 52.381 1.81 0.00 0.00 4.85
2111 2914 1.593006 CGGTACTAATGAAAGCGGCTG 59.407 52.381 1.81 0.00 0.00 4.85
2112 2915 1.472728 CCGGTACTAATGAAAGCGGCT 60.473 52.381 0.00 0.00 45.85 5.52
2113 2916 0.935196 CCGGTACTAATGAAAGCGGC 59.065 55.000 0.00 0.00 45.85 6.53
2115 2918 2.280708 CGAACCGGTACTAATGAAAGCG 59.719 50.000 8.00 0.00 0.00 4.68
2116 2919 3.061697 CACGAACCGGTACTAATGAAAGC 59.938 47.826 8.00 0.00 0.00 3.51
2117 2920 3.615496 CCACGAACCGGTACTAATGAAAG 59.385 47.826 8.00 0.00 0.00 2.62
2118 2921 3.587923 CCACGAACCGGTACTAATGAAA 58.412 45.455 8.00 0.00 0.00 2.69
2119 2922 2.674747 GCCACGAACCGGTACTAATGAA 60.675 50.000 8.00 0.00 0.00 2.57
2120 2923 1.135024 GCCACGAACCGGTACTAATGA 60.135 52.381 8.00 0.00 0.00 2.57
2121 2924 1.283736 GCCACGAACCGGTACTAATG 58.716 55.000 8.00 2.10 0.00 1.90
2122 2925 0.176449 GGCCACGAACCGGTACTAAT 59.824 55.000 8.00 0.00 0.00 1.73
2123 2926 1.591183 GGCCACGAACCGGTACTAA 59.409 57.895 8.00 0.00 0.00 2.24
2124 2927 3.287445 GGCCACGAACCGGTACTA 58.713 61.111 8.00 0.00 0.00 1.82
2135 2938 2.047655 TGCTAAAGGTCGGCCACG 60.048 61.111 9.71 0.00 42.74 4.94
2136 2939 2.038837 GGTGCTAAAGGTCGGCCAC 61.039 63.158 9.71 0.00 37.19 5.01
2137 2940 2.349755 GGTGCTAAAGGTCGGCCA 59.650 61.111 9.71 0.00 37.19 5.36
2138 2941 2.818274 CGGTGCTAAAGGTCGGCC 60.818 66.667 0.00 0.00 0.00 6.13
2139 2942 2.818274 CCGGTGCTAAAGGTCGGC 60.818 66.667 0.00 0.00 34.17 5.54
2140 2943 1.004200 AACCGGTGCTAAAGGTCGG 60.004 57.895 8.52 0.00 45.42 4.79
2141 2944 1.349259 CGAACCGGTGCTAAAGGTCG 61.349 60.000 8.52 7.35 37.26 4.79
2142 2945 0.320160 ACGAACCGGTGCTAAAGGTC 60.320 55.000 8.52 0.00 37.26 3.85
2143 2946 0.601841 CACGAACCGGTGCTAAAGGT 60.602 55.000 8.52 0.00 40.50 3.50
2144 2947 2.159181 CACGAACCGGTGCTAAAGG 58.841 57.895 8.52 0.00 0.00 3.11
2151 2954 1.374885 TACATGGCACGAACCGGTG 60.375 57.895 8.52 0.00 40.89 4.94
2152 2955 1.375013 GTACATGGCACGAACCGGT 60.375 57.895 0.00 0.00 0.00 5.28
2153 2956 2.104253 GGTACATGGCACGAACCGG 61.104 63.158 0.00 0.00 0.00 5.28
2154 2957 2.449525 CGGTACATGGCACGAACCG 61.450 63.158 18.17 18.17 46.04 4.44
2155 2958 2.104253 CCGGTACATGGCACGAACC 61.104 63.158 0.00 0.00 0.00 3.62
2156 2959 2.104253 CCCGGTACATGGCACGAAC 61.104 63.158 0.00 0.00 0.00 3.95
2157 2960 2.266372 CCCGGTACATGGCACGAA 59.734 61.111 0.00 0.00 0.00 3.85
2158 2961 4.460683 GCCCGGTACATGGCACGA 62.461 66.667 17.37 0.00 44.22 4.35
2163 2966 4.849310 CCACGGCCCGGTACATGG 62.849 72.222 8.57 0.78 0.00 3.66
2181 2984 0.601841 ACCTTTAGCACCGGTTCGTG 60.602 55.000 2.97 0.00 36.80 4.35
2182 2985 0.320160 GACCTTTAGCACCGGTTCGT 60.320 55.000 2.97 0.00 0.00 3.85
2183 2986 1.349259 CGACCTTTAGCACCGGTTCG 61.349 60.000 2.97 5.32 0.00 3.95
2184 2987 0.320160 ACGACCTTTAGCACCGGTTC 60.320 55.000 2.97 0.00 0.00 3.62
2185 2988 0.320160 GACGACCTTTAGCACCGGTT 60.320 55.000 2.97 0.00 0.00 4.44
2186 2989 1.291272 GACGACCTTTAGCACCGGT 59.709 57.895 0.00 0.00 0.00 5.28
2187 2990 1.447314 GGACGACCTTTAGCACCGG 60.447 63.158 0.00 0.00 0.00 5.28
2188 2991 0.813184 TAGGACGACCTTTAGCACCG 59.187 55.000 12.68 0.00 45.36 4.94
2189 2992 1.547372 TGTAGGACGACCTTTAGCACC 59.453 52.381 12.68 0.00 45.36 5.01
2190 2993 3.521947 ATGTAGGACGACCTTTAGCAC 57.478 47.619 12.68 4.25 45.36 4.40
2191 2994 4.441079 GCTTATGTAGGACGACCTTTAGCA 60.441 45.833 12.68 7.14 45.36 3.49
2192 2995 4.049869 GCTTATGTAGGACGACCTTTAGC 58.950 47.826 12.68 5.59 45.36 3.09
2193 2996 4.501058 GGGCTTATGTAGGACGACCTTTAG 60.501 50.000 12.68 0.00 45.36 1.85
2194 2997 3.385755 GGGCTTATGTAGGACGACCTTTA 59.614 47.826 12.68 1.89 45.36 1.85
2195 2998 2.169978 GGGCTTATGTAGGACGACCTTT 59.830 50.000 12.68 0.46 45.36 3.11
2196 2999 1.761198 GGGCTTATGTAGGACGACCTT 59.239 52.381 12.68 0.00 45.36 3.50
2198 3001 1.411041 AGGGCTTATGTAGGACGACC 58.589 55.000 0.00 0.00 0.00 4.79
2199 3002 2.543238 CGAAGGGCTTATGTAGGACGAC 60.543 54.545 0.00 0.00 0.00 4.34
2200 3003 1.679680 CGAAGGGCTTATGTAGGACGA 59.320 52.381 0.00 0.00 0.00 4.20
2201 3004 1.407979 ACGAAGGGCTTATGTAGGACG 59.592 52.381 0.00 0.00 0.00 4.79
2202 3005 2.223994 GGACGAAGGGCTTATGTAGGAC 60.224 54.545 0.00 0.00 0.00 3.85
2203 3006 2.037144 GGACGAAGGGCTTATGTAGGA 58.963 52.381 0.00 0.00 0.00 2.94
2204 3007 1.760613 TGGACGAAGGGCTTATGTAGG 59.239 52.381 0.00 0.00 0.00 3.18
2205 3008 2.483188 GGTGGACGAAGGGCTTATGTAG 60.483 54.545 0.00 0.00 0.00 2.74
2206 3009 1.483415 GGTGGACGAAGGGCTTATGTA 59.517 52.381 0.00 0.00 0.00 2.29
2207 3010 0.252197 GGTGGACGAAGGGCTTATGT 59.748 55.000 0.00 0.00 0.00 2.29
2208 3011 0.541863 AGGTGGACGAAGGGCTTATG 59.458 55.000 0.00 0.00 0.00 1.90
2209 3012 0.541863 CAGGTGGACGAAGGGCTTAT 59.458 55.000 0.00 0.00 0.00 1.73
2210 3013 0.543410 TCAGGTGGACGAAGGGCTTA 60.543 55.000 0.00 0.00 0.00 3.09
2211 3014 1.831652 CTCAGGTGGACGAAGGGCTT 61.832 60.000 0.00 0.00 0.00 4.35
2212 3015 2.203788 TCAGGTGGACGAAGGGCT 60.204 61.111 0.00 0.00 0.00 5.19
2213 3016 2.266055 CTCAGGTGGACGAAGGGC 59.734 66.667 0.00 0.00 0.00 5.19
2214 3017 2.232298 GAGCTCAGGTGGACGAAGGG 62.232 65.000 9.40 0.00 0.00 3.95
2215 3018 1.216710 GAGCTCAGGTGGACGAAGG 59.783 63.158 9.40 0.00 0.00 3.46
2216 3019 1.153939 CGAGCTCAGGTGGACGAAG 60.154 63.158 15.40 0.00 0.00 3.79
2217 3020 2.636412 CCGAGCTCAGGTGGACGAA 61.636 63.158 15.40 0.00 0.00 3.85
2218 3021 3.062466 CCGAGCTCAGGTGGACGA 61.062 66.667 15.40 0.00 0.00 4.20
2219 3022 3.343788 GACCGAGCTCAGGTGGACG 62.344 68.421 27.44 7.49 43.01 4.79
2220 3023 1.979693 AGACCGAGCTCAGGTGGAC 60.980 63.158 27.44 15.05 43.01 4.02
2221 3024 1.979155 CAGACCGAGCTCAGGTGGA 60.979 63.158 27.44 0.00 43.01 4.02
2222 3025 1.821061 AACAGACCGAGCTCAGGTGG 61.821 60.000 27.44 21.58 43.01 4.61
2223 3026 0.389166 GAACAGACCGAGCTCAGGTG 60.389 60.000 27.44 18.78 43.01 4.00
2224 3027 0.540830 AGAACAGACCGAGCTCAGGT 60.541 55.000 24.15 24.15 46.16 4.00
2225 3028 0.605589 AAGAACAGACCGAGCTCAGG 59.394 55.000 15.40 17.55 0.00 3.86
2226 3029 1.403514 GGAAGAACAGACCGAGCTCAG 60.404 57.143 15.40 4.66 0.00 3.35
2227 3030 0.603569 GGAAGAACAGACCGAGCTCA 59.396 55.000 15.40 0.00 0.00 4.26
2228 3031 0.108567 GGGAAGAACAGACCGAGCTC 60.109 60.000 2.73 2.73 0.00 4.09
2229 3032 1.545706 GGGGAAGAACAGACCGAGCT 61.546 60.000 0.00 0.00 0.00 4.09
2230 3033 1.079057 GGGGAAGAACAGACCGAGC 60.079 63.158 0.00 0.00 0.00 5.03
2231 3034 0.977395 AAGGGGAAGAACAGACCGAG 59.023 55.000 0.00 0.00 0.00 4.63
2232 3035 1.346722 GAAAGGGGAAGAACAGACCGA 59.653 52.381 0.00 0.00 0.00 4.69
2233 3036 1.610886 GGAAAGGGGAAGAACAGACCG 60.611 57.143 0.00 0.00 0.00 4.79
2234 3037 1.271982 GGGAAAGGGGAAGAACAGACC 60.272 57.143 0.00 0.00 0.00 3.85
2235 3038 1.271982 GGGGAAAGGGGAAGAACAGAC 60.272 57.143 0.00 0.00 0.00 3.51
2236 3039 1.073098 GGGGAAAGGGGAAGAACAGA 58.927 55.000 0.00 0.00 0.00 3.41
2237 3040 1.004862 GAGGGGAAAGGGGAAGAACAG 59.995 57.143 0.00 0.00 0.00 3.16
2238 3041 1.073098 GAGGGGAAAGGGGAAGAACA 58.927 55.000 0.00 0.00 0.00 3.18
2239 3042 1.282447 GAGAGGGGAAAGGGGAAGAAC 59.718 57.143 0.00 0.00 0.00 3.01
2240 3043 1.670059 GAGAGGGGAAAGGGGAAGAA 58.330 55.000 0.00 0.00 0.00 2.52
2241 3044 0.253207 GGAGAGGGGAAAGGGGAAGA 60.253 60.000 0.00 0.00 0.00 2.87
2242 3045 0.253394 AGGAGAGGGGAAAGGGGAAG 60.253 60.000 0.00 0.00 0.00 3.46
2243 3046 0.253207 GAGGAGAGGGGAAAGGGGAA 60.253 60.000 0.00 0.00 0.00 3.97
2244 3047 1.162951 AGAGGAGAGGGGAAAGGGGA 61.163 60.000 0.00 0.00 0.00 4.81
2245 3048 0.692756 GAGAGGAGAGGGGAAAGGGG 60.693 65.000 0.00 0.00 0.00 4.79
2246 3049 0.341609 AGAGAGGAGAGGGGAAAGGG 59.658 60.000 0.00 0.00 0.00 3.95
2247 3050 1.273552 ACAGAGAGGAGAGGGGAAAGG 60.274 57.143 0.00 0.00 0.00 3.11
2248 3051 2.246091 ACAGAGAGGAGAGGGGAAAG 57.754 55.000 0.00 0.00 0.00 2.62
2249 3052 2.112691 AGAACAGAGAGGAGAGGGGAAA 59.887 50.000 0.00 0.00 0.00 3.13
2250 3053 1.719378 AGAACAGAGAGGAGAGGGGAA 59.281 52.381 0.00 0.00 0.00 3.97
2251 3054 1.388174 AGAACAGAGAGGAGAGGGGA 58.612 55.000 0.00 0.00 0.00 4.81
2252 3055 2.107366 GAAGAACAGAGAGGAGAGGGG 58.893 57.143 0.00 0.00 0.00 4.79
2253 3056 2.107366 GGAAGAACAGAGAGGAGAGGG 58.893 57.143 0.00 0.00 0.00 4.30
2254 3057 2.107366 GGGAAGAACAGAGAGGAGAGG 58.893 57.143 0.00 0.00 0.00 3.69
2255 3058 2.107366 GGGGAAGAACAGAGAGGAGAG 58.893 57.143 0.00 0.00 0.00 3.20
2256 3059 1.719378 AGGGGAAGAACAGAGAGGAGA 59.281 52.381 0.00 0.00 0.00 3.71
2257 3060 2.107366 GAGGGGAAGAACAGAGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
2258 3061 1.719378 AGAGGGGAAGAACAGAGAGGA 59.281 52.381 0.00 0.00 0.00 3.71
2259 3062 2.246091 AGAGGGGAAGAACAGAGAGG 57.754 55.000 0.00 0.00 0.00 3.69
2260 3063 2.499693 GGAAGAGGGGAAGAACAGAGAG 59.500 54.545 0.00 0.00 0.00 3.20
2261 3064 2.112691 AGGAAGAGGGGAAGAACAGAGA 59.887 50.000 0.00 0.00 0.00 3.10
2262 3065 2.499693 GAGGAAGAGGGGAAGAACAGAG 59.500 54.545 0.00 0.00 0.00 3.35
2263 3066 2.112691 AGAGGAAGAGGGGAAGAACAGA 59.887 50.000 0.00 0.00 0.00 3.41
2264 3067 2.499693 GAGAGGAAGAGGGGAAGAACAG 59.500 54.545 0.00 0.00 0.00 3.16
2265 3068 2.541466 GAGAGGAAGAGGGGAAGAACA 58.459 52.381 0.00 0.00 0.00 3.18
2266 3069 1.478916 CGAGAGGAAGAGGGGAAGAAC 59.521 57.143 0.00 0.00 0.00 3.01
2267 3070 1.358103 TCGAGAGGAAGAGGGGAAGAA 59.642 52.381 0.00 0.00 0.00 2.52
2268 3071 1.000496 TCGAGAGGAAGAGGGGAAGA 59.000 55.000 0.00 0.00 0.00 2.87
2269 3072 1.398692 CTCGAGAGGAAGAGGGGAAG 58.601 60.000 6.58 0.00 0.00 3.46
2270 3073 0.684805 GCTCGAGAGGAAGAGGGGAA 60.685 60.000 18.75 0.00 35.19 3.97
2271 3074 1.076632 GCTCGAGAGGAAGAGGGGA 60.077 63.158 18.75 0.00 35.19 4.81
2272 3075 1.076339 AGCTCGAGAGGAAGAGGGG 60.076 63.158 18.75 0.00 35.19 4.79
2273 3076 0.395036 TGAGCTCGAGAGGAAGAGGG 60.395 60.000 18.75 0.00 35.19 4.30
2274 3077 1.608590 GATGAGCTCGAGAGGAAGAGG 59.391 57.143 18.75 0.00 35.19 3.69
2275 3078 2.033299 GTGATGAGCTCGAGAGGAAGAG 59.967 54.545 18.75 0.00 37.54 2.85
2276 3079 2.020720 GTGATGAGCTCGAGAGGAAGA 58.979 52.381 18.75 0.00 0.00 2.87
2277 3080 1.747924 TGTGATGAGCTCGAGAGGAAG 59.252 52.381 18.75 0.00 0.00 3.46
2278 3081 1.474478 GTGTGATGAGCTCGAGAGGAA 59.526 52.381 18.75 0.00 0.00 3.36
2279 3082 1.098869 GTGTGATGAGCTCGAGAGGA 58.901 55.000 18.75 0.00 0.00 3.71
2280 3083 0.813821 TGTGTGATGAGCTCGAGAGG 59.186 55.000 18.75 0.00 0.00 3.69
2281 3084 2.867287 ATGTGTGATGAGCTCGAGAG 57.133 50.000 18.75 0.00 0.00 3.20
2282 3085 3.599730 AAATGTGTGATGAGCTCGAGA 57.400 42.857 18.75 0.00 0.00 4.04
2283 3086 3.727079 GCAAAATGTGTGATGAGCTCGAG 60.727 47.826 8.45 8.45 0.00 4.04
2284 3087 2.160219 GCAAAATGTGTGATGAGCTCGA 59.840 45.455 9.64 0.00 0.00 4.04
2285 3088 2.512885 GCAAAATGTGTGATGAGCTCG 58.487 47.619 9.64 0.00 0.00 5.03
2286 3089 2.416431 GGGCAAAATGTGTGATGAGCTC 60.416 50.000 6.82 6.82 0.00 4.09
2287 3090 1.547372 GGGCAAAATGTGTGATGAGCT 59.453 47.619 0.00 0.00 0.00 4.09
2288 3091 1.273048 TGGGCAAAATGTGTGATGAGC 59.727 47.619 0.00 0.00 0.00 4.26
2289 3092 3.663995 TTGGGCAAAATGTGTGATGAG 57.336 42.857 0.00 0.00 0.00 2.90
2290 3093 4.412796 TTTTGGGCAAAATGTGTGATGA 57.587 36.364 0.00 0.00 35.57 2.92
2291 3094 5.692613 AATTTTGGGCAAAATGTGTGATG 57.307 34.783 0.00 0.00 46.76 3.07
2292 3095 6.074544 CAAATTTTGGGCAAAATGTGTGAT 57.925 33.333 3.58 0.00 46.76 3.06
2293 3096 5.496133 CAAATTTTGGGCAAAATGTGTGA 57.504 34.783 3.58 0.00 46.76 3.58
2297 3100 5.884792 TCTTGACAAATTTTGGGCAAAATGT 59.115 32.000 13.42 0.00 46.76 2.71
2298 3101 6.374565 TCTTGACAAATTTTGGGCAAAATG 57.625 33.333 13.42 6.34 46.76 2.32
2300 3103 7.121759 TCAAATCTTGACAAATTTTGGGCAAAA 59.878 29.630 13.42 5.11 38.44 2.44
2301 3104 6.600822 TCAAATCTTGACAAATTTTGGGCAAA 59.399 30.769 13.42 8.37 34.08 3.68
2302 3105 6.118170 TCAAATCTTGACAAATTTTGGGCAA 58.882 32.000 13.42 14.19 34.08 4.52
2303 3106 5.678583 TCAAATCTTGACAAATTTTGGGCA 58.321 33.333 13.42 8.17 34.08 5.36
2304 3107 6.293571 CCTTCAAATCTTGACAAATTTTGGGC 60.294 38.462 13.42 5.84 39.87 5.36
2305 3108 6.293571 GCCTTCAAATCTTGACAAATTTTGGG 60.294 38.462 13.42 13.27 39.87 4.12
2306 3109 6.293571 GGCCTTCAAATCTTGACAAATTTTGG 60.294 38.462 13.42 13.17 39.87 3.28
2307 3110 6.293571 GGGCCTTCAAATCTTGACAAATTTTG 60.294 38.462 0.84 7.59 39.87 2.44
2308 3111 5.764686 GGGCCTTCAAATCTTGACAAATTTT 59.235 36.000 0.84 0.00 39.87 1.82
2309 3112 5.308014 GGGCCTTCAAATCTTGACAAATTT 58.692 37.500 0.84 0.00 39.87 1.82
2310 3113 4.263025 GGGGCCTTCAAATCTTGACAAATT 60.263 41.667 0.84 0.00 39.87 1.82
2311 3114 3.261643 GGGGCCTTCAAATCTTGACAAAT 59.738 43.478 0.84 0.00 39.87 2.32
2312 3115 2.632512 GGGGCCTTCAAATCTTGACAAA 59.367 45.455 0.84 0.00 39.87 2.83
2313 3116 2.247358 GGGGCCTTCAAATCTTGACAA 58.753 47.619 0.84 0.00 39.87 3.18
2314 3117 1.146774 TGGGGCCTTCAAATCTTGACA 59.853 47.619 0.84 0.00 39.87 3.58
2315 3118 1.923356 TGGGGCCTTCAAATCTTGAC 58.077 50.000 0.84 0.00 39.87 3.18
2316 3119 2.624029 GGATGGGGCCTTCAAATCTTGA 60.624 50.000 0.84 0.00 38.04 3.02
2317 3120 1.758862 GGATGGGGCCTTCAAATCTTG 59.241 52.381 0.84 0.00 0.00 3.02
2318 3121 1.362237 TGGATGGGGCCTTCAAATCTT 59.638 47.619 0.84 0.00 0.00 2.40
2319 3122 1.009997 TGGATGGGGCCTTCAAATCT 58.990 50.000 0.84 0.00 0.00 2.40
2320 3123 2.092598 ATGGATGGGGCCTTCAAATC 57.907 50.000 0.84 0.00 0.00 2.17
2321 3124 2.293051 TGAATGGATGGGGCCTTCAAAT 60.293 45.455 0.84 0.00 0.00 2.32
2322 3125 1.078490 TGAATGGATGGGGCCTTCAAA 59.922 47.619 0.84 0.00 0.00 2.69
2323 3126 0.709397 TGAATGGATGGGGCCTTCAA 59.291 50.000 0.84 0.00 0.00 2.69
2324 3127 0.709397 TTGAATGGATGGGGCCTTCA 59.291 50.000 0.84 0.84 0.00 3.02
2325 3128 1.864669 TTTGAATGGATGGGGCCTTC 58.135 50.000 0.84 0.35 0.00 3.46
2326 3129 2.340721 TTTTGAATGGATGGGGCCTT 57.659 45.000 0.84 0.00 0.00 4.35
2327 3130 2.121129 CATTTTGAATGGATGGGGCCT 58.879 47.619 0.84 0.00 0.00 5.19
2328 3131 2.117865 TCATTTTGAATGGATGGGGCC 58.882 47.619 0.00 0.00 0.00 5.80
2329 3132 3.388676 TGATCATTTTGAATGGATGGGGC 59.611 43.478 0.00 0.00 0.00 5.80
2330 3133 4.406326 TGTGATCATTTTGAATGGATGGGG 59.594 41.667 0.00 0.00 0.00 4.96
2331 3134 5.601583 TGTGATCATTTTGAATGGATGGG 57.398 39.130 0.00 0.00 0.00 4.00
2332 3135 6.537301 CCTTTGTGATCATTTTGAATGGATGG 59.463 38.462 0.00 0.00 0.00 3.51
2333 3136 7.101054 ACCTTTGTGATCATTTTGAATGGATG 58.899 34.615 0.00 0.00 0.00 3.51
2334 3137 7.248743 ACCTTTGTGATCATTTTGAATGGAT 57.751 32.000 0.00 0.00 0.00 3.41
2335 3138 6.669125 ACCTTTGTGATCATTTTGAATGGA 57.331 33.333 0.00 0.00 0.00 3.41
2336 3139 7.063780 GCTAACCTTTGTGATCATTTTGAATGG 59.936 37.037 0.00 2.44 0.00 3.16
2337 3140 7.956558 GCTAACCTTTGTGATCATTTTGAATG 58.043 34.615 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.