Multiple sequence alignment - TraesCS3D01G172800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G172800 chr3D 100.000 5263 0 0 1 5263 153173694 153168432 0.000000e+00 9720.0
1 TraesCS3D01G172800 chr3D 80.928 194 33 4 14 205 523340843 523340652 3.280000e-32 150.0
2 TraesCS3D01G172800 chr3A 89.271 3747 216 75 1526 5217 176932923 176936538 0.000000e+00 4521.0
3 TraesCS3D01G172800 chr3A 89.397 1160 61 33 720 1844 176931762 176932894 0.000000e+00 1404.0
4 TraesCS3D01G172800 chr3A 91.270 126 7 2 214 339 176574219 176574340 9.060000e-38 169.0
5 TraesCS3D01G172800 chr3A 81.159 207 22 6 484 680 176930684 176930883 3.280000e-32 150.0
6 TraesCS3D01G172800 chr3B 90.969 2591 156 33 1331 3869 224487667 224485103 0.000000e+00 3417.0
7 TraesCS3D01G172800 chr3B 89.020 765 38 21 3915 4656 224485098 224484357 0.000000e+00 905.0
8 TraesCS3D01G172800 chr3B 87.646 599 38 19 718 1303 224488238 224487663 0.000000e+00 664.0
9 TraesCS3D01G172800 chr3B 86.905 420 21 10 4814 5217 224483972 224483571 1.740000e-119 440.0
10 TraesCS3D01G172800 chr3B 83.254 209 16 7 484 680 224503046 224502845 1.950000e-39 174.0
11 TraesCS3D01G172800 chr3B 94.915 59 1 1 4766 4822 224484183 224484125 2.020000e-14 91.6
12 TraesCS3D01G172800 chr3B 100.000 33 0 0 214 246 224629075 224629043 1.580000e-05 62.1
13 TraesCS3D01G172800 chr4D 86.538 208 25 3 4 209 505439253 505439047 5.300000e-55 226.0
14 TraesCS3D01G172800 chr1D 85.000 220 23 1 3 212 429029568 429029349 1.150000e-51 215.0
15 TraesCS3D01G172800 chr2B 83.772 228 24 4 3 218 422507357 422507131 2.480000e-48 204.0
16 TraesCS3D01G172800 chrUn 81.982 222 26 9 3 216 47550836 47551051 5.420000e-40 176.0
17 TraesCS3D01G172800 chr5D 81.726 197 29 7 14 207 104451237 104451429 1.960000e-34 158.0
18 TraesCS3D01G172800 chr2D 80.808 198 37 1 14 211 417802682 417802486 2.540000e-33 154.0
19 TraesCS3D01G172800 chr2D 79.439 214 36 8 3 211 559392529 559392739 1.530000e-30 145.0
20 TraesCS3D01G172800 chr4A 79.798 198 33 7 14 207 742886015 742885821 2.560000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G172800 chr3D 153168432 153173694 5262 True 9720.00 9720 100.000 1 5263 1 chr3D.!!$R1 5262
1 TraesCS3D01G172800 chr3A 176930684 176936538 5854 False 2025.00 4521 86.609 484 5217 3 chr3A.!!$F2 4733
2 TraesCS3D01G172800 chr3B 224483571 224488238 4667 True 1103.52 3417 89.891 718 5217 5 chr3B.!!$R3 4499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
671 682 0.036952 AAGTGCCAGGAGTCACGATG 60.037 55.0 0.00 0.00 38.19 3.84 F
716 727 0.107410 TGGTGCCCTAATAACGCCAG 60.107 55.0 0.00 0.00 38.99 4.85 F
1325 2192 0.535335 TCGTCCGAATTTGGGAGGAG 59.465 55.0 16.02 5.33 41.95 3.69 F
3036 4307 0.324552 ATACCAATGCTGCTGGGCAA 60.325 50.0 11.99 0.00 45.68 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1968 3221 0.033699 ACACCTCCTACCGTCCTACC 60.034 60.0 0.00 0.0 0.00 3.18 R
2176 3429 0.468226 TACAGCCCATTGGATCGACC 59.532 55.0 3.62 0.0 39.54 4.79 R
3090 4361 0.037326 TAACCTGTTGCTGAGCCGAG 60.037 55.0 0.23 0.0 0.00 4.63 R
4296 5583 0.109342 AAGGCCAGACACAACTCAGG 59.891 55.0 5.01 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.815040 CAGCAATTCAGAAGCATAGGAG 57.185 45.455 0.00 0.00 0.00 3.69
22 23 3.003482 CAGCAATTCAGAAGCATAGGAGC 59.997 47.826 0.00 0.00 0.00 4.70
23 24 2.032204 GCAATTCAGAAGCATAGGAGCG 60.032 50.000 0.00 0.00 40.15 5.03
24 25 3.201290 CAATTCAGAAGCATAGGAGCGT 58.799 45.455 0.00 0.00 40.15 5.07
25 26 2.299993 TTCAGAAGCATAGGAGCGTG 57.700 50.000 0.00 0.00 40.15 5.34
26 27 0.461548 TCAGAAGCATAGGAGCGTGG 59.538 55.000 0.00 0.00 40.15 4.94
27 28 0.176680 CAGAAGCATAGGAGCGTGGT 59.823 55.000 0.00 0.00 40.15 4.16
28 29 0.176680 AGAAGCATAGGAGCGTGGTG 59.823 55.000 0.00 0.00 40.15 4.17
29 30 0.811616 GAAGCATAGGAGCGTGGTGG 60.812 60.000 0.00 0.00 40.15 4.61
30 31 2.876368 AAGCATAGGAGCGTGGTGGC 62.876 60.000 0.00 0.00 40.15 5.01
31 32 2.584064 CATAGGAGCGTGGTGGCA 59.416 61.111 0.00 0.00 34.64 4.92
32 33 1.146930 CATAGGAGCGTGGTGGCAT 59.853 57.895 0.00 0.00 34.64 4.40
33 34 0.464373 CATAGGAGCGTGGTGGCATT 60.464 55.000 0.00 0.00 34.64 3.56
34 35 0.179045 ATAGGAGCGTGGTGGCATTC 60.179 55.000 0.00 0.00 34.64 2.67
35 36 1.264749 TAGGAGCGTGGTGGCATTCT 61.265 55.000 0.00 0.00 34.64 2.40
36 37 1.675641 GGAGCGTGGTGGCATTCTT 60.676 57.895 0.00 0.00 34.64 2.52
37 38 1.648467 GGAGCGTGGTGGCATTCTTC 61.648 60.000 0.00 0.00 34.64 2.87
38 39 1.970917 GAGCGTGGTGGCATTCTTCG 61.971 60.000 0.00 0.00 34.64 3.79
39 40 3.039202 GCGTGGTGGCATTCTTCGG 62.039 63.158 0.00 0.00 0.00 4.30
40 41 1.375396 CGTGGTGGCATTCTTCGGA 60.375 57.895 0.00 0.00 0.00 4.55
41 42 1.361668 CGTGGTGGCATTCTTCGGAG 61.362 60.000 0.00 0.00 0.00 4.63
42 43 1.377202 TGGTGGCATTCTTCGGAGC 60.377 57.895 0.00 0.00 0.00 4.70
43 44 2.464459 GGTGGCATTCTTCGGAGCG 61.464 63.158 0.00 0.00 0.00 5.03
44 45 2.819595 TGGCATTCTTCGGAGCGC 60.820 61.111 0.00 0.00 0.00 5.92
45 46 3.929948 GGCATTCTTCGGAGCGCG 61.930 66.667 0.00 0.00 0.00 6.86
46 47 4.581648 GCATTCTTCGGAGCGCGC 62.582 66.667 26.66 26.66 0.00 6.86
47 48 3.929948 CATTCTTCGGAGCGCGCC 61.930 66.667 30.33 21.46 0.00 6.53
76 77 1.521423 GGAATACCGTCGCTTTCATCG 59.479 52.381 0.00 0.00 0.00 3.84
77 78 2.456989 GAATACCGTCGCTTTCATCGA 58.543 47.619 0.00 0.00 0.00 3.59
78 79 2.795175 ATACCGTCGCTTTCATCGAT 57.205 45.000 0.00 0.00 38.29 3.59
79 80 3.909776 ATACCGTCGCTTTCATCGATA 57.090 42.857 0.00 0.00 38.29 2.92
80 81 2.121116 ACCGTCGCTTTCATCGATAG 57.879 50.000 0.00 0.00 38.29 2.08
81 82 1.269102 ACCGTCGCTTTCATCGATAGG 60.269 52.381 0.00 0.00 40.15 2.57
82 83 1.001706 CCGTCGCTTTCATCGATAGGA 60.002 52.381 0.00 0.00 38.18 2.94
83 84 2.351835 CCGTCGCTTTCATCGATAGGAT 60.352 50.000 0.00 0.00 38.18 3.24
92 93 3.885484 CATCGATAGGATGTTGTTGGC 57.115 47.619 0.00 0.00 46.14 4.52
93 94 3.205338 CATCGATAGGATGTTGTTGGCA 58.795 45.455 0.00 0.00 46.14 4.92
94 95 3.558931 TCGATAGGATGTTGTTGGCAT 57.441 42.857 0.00 0.00 0.00 4.40
95 96 3.884895 TCGATAGGATGTTGTTGGCATT 58.115 40.909 0.00 0.00 0.00 3.56
96 97 4.269183 TCGATAGGATGTTGTTGGCATTT 58.731 39.130 0.00 0.00 0.00 2.32
97 98 4.704540 TCGATAGGATGTTGTTGGCATTTT 59.295 37.500 0.00 0.00 0.00 1.82
98 99 5.184864 TCGATAGGATGTTGTTGGCATTTTT 59.815 36.000 0.00 0.00 0.00 1.94
120 121 6.735678 TTTTCTCTTGTTTTTCTTTTGGGC 57.264 33.333 0.00 0.00 0.00 5.36
121 122 4.040445 TCTCTTGTTTTTCTTTTGGGCG 57.960 40.909 0.00 0.00 0.00 6.13
122 123 3.445805 TCTCTTGTTTTTCTTTTGGGCGT 59.554 39.130 0.00 0.00 0.00 5.68
123 124 3.516615 TCTTGTTTTTCTTTTGGGCGTG 58.483 40.909 0.00 0.00 0.00 5.34
124 125 3.193691 TCTTGTTTTTCTTTTGGGCGTGA 59.806 39.130 0.00 0.00 0.00 4.35
125 126 3.810310 TGTTTTTCTTTTGGGCGTGAT 57.190 38.095 0.00 0.00 0.00 3.06
126 127 4.130286 TGTTTTTCTTTTGGGCGTGATT 57.870 36.364 0.00 0.00 0.00 2.57
127 128 3.868077 TGTTTTTCTTTTGGGCGTGATTG 59.132 39.130 0.00 0.00 0.00 2.67
128 129 3.810310 TTTTCTTTTGGGCGTGATTGT 57.190 38.095 0.00 0.00 0.00 2.71
129 130 4.920640 TTTTCTTTTGGGCGTGATTGTA 57.079 36.364 0.00 0.00 0.00 2.41
130 131 3.907894 TTCTTTTGGGCGTGATTGTAC 57.092 42.857 0.00 0.00 0.00 2.90
131 132 3.134574 TCTTTTGGGCGTGATTGTACT 57.865 42.857 0.00 0.00 0.00 2.73
132 133 2.811431 TCTTTTGGGCGTGATTGTACTG 59.189 45.455 0.00 0.00 0.00 2.74
133 134 2.264005 TTTGGGCGTGATTGTACTGT 57.736 45.000 0.00 0.00 0.00 3.55
134 135 2.264005 TTGGGCGTGATTGTACTGTT 57.736 45.000 0.00 0.00 0.00 3.16
135 136 2.264005 TGGGCGTGATTGTACTGTTT 57.736 45.000 0.00 0.00 0.00 2.83
136 137 1.876799 TGGGCGTGATTGTACTGTTTG 59.123 47.619 0.00 0.00 0.00 2.93
137 138 1.401018 GGGCGTGATTGTACTGTTTGC 60.401 52.381 0.00 0.00 0.00 3.68
138 139 1.401018 GGCGTGATTGTACTGTTTGCC 60.401 52.381 0.00 0.00 0.00 4.52
139 140 1.401018 GCGTGATTGTACTGTTTGCCC 60.401 52.381 0.00 0.00 0.00 5.36
140 141 1.199097 CGTGATTGTACTGTTTGCCCC 59.801 52.381 0.00 0.00 0.00 5.80
141 142 2.235016 GTGATTGTACTGTTTGCCCCA 58.765 47.619 0.00 0.00 0.00 4.96
142 143 2.228822 GTGATTGTACTGTTTGCCCCAG 59.771 50.000 0.00 0.00 36.01 4.45
143 144 1.202348 GATTGTACTGTTTGCCCCAGC 59.798 52.381 0.00 0.00 40.48 4.85
144 145 1.169661 TTGTACTGTTTGCCCCAGCG 61.170 55.000 0.00 0.00 44.31 5.18
145 146 1.302192 GTACTGTTTGCCCCAGCGA 60.302 57.895 0.00 0.00 44.31 4.93
146 147 0.676782 GTACTGTTTGCCCCAGCGAT 60.677 55.000 0.00 0.00 44.31 4.58
147 148 0.676466 TACTGTTTGCCCCAGCGATG 60.676 55.000 0.00 0.00 44.31 3.84
148 149 1.675310 CTGTTTGCCCCAGCGATGA 60.675 57.895 0.06 0.00 44.31 2.92
149 150 1.001020 TGTTTGCCCCAGCGATGAT 60.001 52.632 0.06 0.00 44.31 2.45
150 151 1.031571 TGTTTGCCCCAGCGATGATC 61.032 55.000 0.06 0.00 44.31 2.92
151 152 1.819208 TTTGCCCCAGCGATGATCG 60.819 57.895 11.02 11.02 44.31 3.69
152 153 2.250741 TTTGCCCCAGCGATGATCGA 62.251 55.000 20.25 0.00 43.74 3.59
153 154 2.108976 GCCCCAGCGATGATCGAA 59.891 61.111 20.25 0.00 43.74 3.71
154 155 2.247437 GCCCCAGCGATGATCGAAC 61.247 63.158 20.25 1.25 43.74 3.95
155 156 1.143838 CCCCAGCGATGATCGAACA 59.856 57.895 20.25 0.00 43.74 3.18
156 157 0.877649 CCCCAGCGATGATCGAACAG 60.878 60.000 20.25 3.78 43.74 3.16
157 158 0.179100 CCCAGCGATGATCGAACAGT 60.179 55.000 20.25 0.00 43.74 3.55
158 159 1.645034 CCAGCGATGATCGAACAGTT 58.355 50.000 20.25 0.00 43.74 3.16
159 160 1.325640 CCAGCGATGATCGAACAGTTG 59.674 52.381 20.25 6.05 43.74 3.16
160 161 1.995484 CAGCGATGATCGAACAGTTGT 59.005 47.619 20.25 0.00 43.74 3.32
161 162 3.179048 CAGCGATGATCGAACAGTTGTA 58.821 45.455 20.25 0.00 43.74 2.41
162 163 3.798878 CAGCGATGATCGAACAGTTGTAT 59.201 43.478 20.25 0.00 43.74 2.29
163 164 4.045104 AGCGATGATCGAACAGTTGTATC 58.955 43.478 20.25 0.00 43.74 2.24
164 165 3.121663 GCGATGATCGAACAGTTGTATCG 60.122 47.826 20.25 9.03 43.74 2.92
165 166 3.422217 CGATGATCGAACAGTTGTATCGG 59.578 47.826 9.62 0.00 43.74 4.18
166 167 3.159353 TGATCGAACAGTTGTATCGGG 57.841 47.619 13.04 0.00 37.20 5.14
167 168 2.494471 TGATCGAACAGTTGTATCGGGT 59.506 45.455 13.04 6.35 37.20 5.28
168 169 2.357327 TCGAACAGTTGTATCGGGTG 57.643 50.000 13.04 0.00 37.20 4.61
169 170 1.067425 TCGAACAGTTGTATCGGGTGG 60.067 52.381 13.04 0.00 37.20 4.61
170 171 1.337447 CGAACAGTTGTATCGGGTGGT 60.337 52.381 0.00 0.00 33.15 4.16
171 172 2.774687 GAACAGTTGTATCGGGTGGTT 58.225 47.619 0.00 0.00 0.00 3.67
172 173 2.178912 ACAGTTGTATCGGGTGGTTG 57.821 50.000 0.00 0.00 0.00 3.77
173 174 0.802494 CAGTTGTATCGGGTGGTTGC 59.198 55.000 0.00 0.00 0.00 4.17
174 175 0.690762 AGTTGTATCGGGTGGTTGCT 59.309 50.000 0.00 0.00 0.00 3.91
175 176 1.903860 AGTTGTATCGGGTGGTTGCTA 59.096 47.619 0.00 0.00 0.00 3.49
176 177 2.504175 AGTTGTATCGGGTGGTTGCTAT 59.496 45.455 0.00 0.00 0.00 2.97
177 178 3.707611 AGTTGTATCGGGTGGTTGCTATA 59.292 43.478 0.00 0.00 0.00 1.31
178 179 4.347000 AGTTGTATCGGGTGGTTGCTATAT 59.653 41.667 0.00 0.00 0.00 0.86
179 180 4.967084 TGTATCGGGTGGTTGCTATATT 57.033 40.909 0.00 0.00 0.00 1.28
180 181 6.042322 AGTTGTATCGGGTGGTTGCTATATTA 59.958 38.462 0.00 0.00 0.00 0.98
181 182 6.422344 TGTATCGGGTGGTTGCTATATTAA 57.578 37.500 0.00 0.00 0.00 1.40
182 183 7.011499 TGTATCGGGTGGTTGCTATATTAAT 57.989 36.000 0.00 0.00 0.00 1.40
183 184 8.136563 TGTATCGGGTGGTTGCTATATTAATA 57.863 34.615 0.00 0.00 0.00 0.98
184 185 8.764558 TGTATCGGGTGGTTGCTATATTAATAT 58.235 33.333 12.51 12.51 0.00 1.28
187 188 8.598202 TCGGGTGGTTGCTATATTAATATAGA 57.402 34.615 32.82 20.58 43.02 1.98
188 189 8.692710 TCGGGTGGTTGCTATATTAATATAGAG 58.307 37.037 32.82 18.85 43.02 2.43
189 190 7.926555 CGGGTGGTTGCTATATTAATATAGAGG 59.073 40.741 32.82 16.82 43.02 3.69
190 191 8.211629 GGGTGGTTGCTATATTAATATAGAGGG 58.788 40.741 32.82 16.54 43.02 4.30
191 192 8.211629 GGTGGTTGCTATATTAATATAGAGGGG 58.788 40.741 32.82 16.26 43.02 4.79
192 193 7.715686 GTGGTTGCTATATTAATATAGAGGGGC 59.284 40.741 32.82 22.85 43.02 5.80
193 194 6.929606 GGTTGCTATATTAATATAGAGGGGCG 59.070 42.308 32.82 15.17 43.02 6.13
194 195 7.201974 GGTTGCTATATTAATATAGAGGGGCGA 60.202 40.741 32.82 20.64 43.02 5.54
195 196 7.907841 TGCTATATTAATATAGAGGGGCGAA 57.092 36.000 32.82 11.05 43.02 4.70
196 197 8.313944 TGCTATATTAATATAGAGGGGCGAAA 57.686 34.615 32.82 10.53 43.02 3.46
197 198 8.421784 TGCTATATTAATATAGAGGGGCGAAAG 58.578 37.037 32.82 14.53 43.02 2.62
217 218 2.315925 CCTATTTCGAGAGGCAGCAA 57.684 50.000 0.00 0.00 0.00 3.91
218 219 2.632377 CCTATTTCGAGAGGCAGCAAA 58.368 47.619 0.00 0.00 0.00 3.68
219 220 3.009723 CCTATTTCGAGAGGCAGCAAAA 58.990 45.455 0.00 0.00 0.00 2.44
220 221 3.440173 CCTATTTCGAGAGGCAGCAAAAA 59.560 43.478 0.00 0.00 0.00 1.94
240 241 2.797177 ATCTTGACCTTTGGAGGAGC 57.203 50.000 0.00 0.00 46.74 4.70
241 242 0.693049 TCTTGACCTTTGGAGGAGCC 59.307 55.000 0.00 0.00 46.74 4.70
242 243 0.322906 CTTGACCTTTGGAGGAGCCC 60.323 60.000 0.00 0.00 46.74 5.19
243 244 1.065410 TTGACCTTTGGAGGAGCCCA 61.065 55.000 0.00 0.00 46.74 5.36
244 245 1.065410 TGACCTTTGGAGGAGCCCAA 61.065 55.000 0.00 0.00 46.74 4.12
245 246 0.332972 GACCTTTGGAGGAGCCCAAT 59.667 55.000 0.00 0.00 46.74 3.16
246 247 0.332972 ACCTTTGGAGGAGCCCAATC 59.667 55.000 0.00 0.00 46.74 2.67
247 248 0.396278 CCTTTGGAGGAGCCCAATCC 60.396 60.000 0.00 0.00 46.74 3.01
254 255 3.689832 GGAGCCCAATCCTTCCAAA 57.310 52.632 0.00 0.00 36.35 3.28
255 256 1.186200 GGAGCCCAATCCTTCCAAAC 58.814 55.000 0.00 0.00 36.35 2.93
256 257 1.186200 GAGCCCAATCCTTCCAAACC 58.814 55.000 0.00 0.00 0.00 3.27
257 258 0.486879 AGCCCAATCCTTCCAAACCA 59.513 50.000 0.00 0.00 0.00 3.67
258 259 1.079323 AGCCCAATCCTTCCAAACCAT 59.921 47.619 0.00 0.00 0.00 3.55
259 260 2.314549 AGCCCAATCCTTCCAAACCATA 59.685 45.455 0.00 0.00 0.00 2.74
260 261 3.051880 AGCCCAATCCTTCCAAACCATAT 60.052 43.478 0.00 0.00 0.00 1.78
261 262 3.070015 GCCCAATCCTTCCAAACCATATG 59.930 47.826 0.00 0.00 0.00 1.78
262 263 4.545678 CCCAATCCTTCCAAACCATATGA 58.454 43.478 3.65 0.00 0.00 2.15
263 264 5.149976 CCCAATCCTTCCAAACCATATGAT 58.850 41.667 3.65 0.00 0.00 2.45
264 265 5.244626 CCCAATCCTTCCAAACCATATGATC 59.755 44.000 3.65 0.00 0.00 2.92
265 266 5.244626 CCAATCCTTCCAAACCATATGATCC 59.755 44.000 3.65 0.00 0.00 3.36
266 267 5.668135 ATCCTTCCAAACCATATGATCCA 57.332 39.130 3.65 0.00 0.00 3.41
267 268 5.668135 TCCTTCCAAACCATATGATCCAT 57.332 39.130 3.65 0.00 0.00 3.41
268 269 6.778542 TCCTTCCAAACCATATGATCCATA 57.221 37.500 3.65 0.00 0.00 2.74
269 270 6.782986 TCCTTCCAAACCATATGATCCATAG 58.217 40.000 3.65 0.00 29.42 2.23
270 271 6.562223 TCCTTCCAAACCATATGATCCATAGA 59.438 38.462 3.65 0.00 29.42 1.98
271 272 7.073598 TCCTTCCAAACCATATGATCCATAGAA 59.926 37.037 3.65 0.00 29.42 2.10
272 273 7.392673 CCTTCCAAACCATATGATCCATAGAAG 59.607 40.741 3.65 7.41 29.42 2.85
273 274 7.631510 TCCAAACCATATGATCCATAGAAGA 57.368 36.000 3.65 0.00 29.42 2.87
274 275 7.683578 TCCAAACCATATGATCCATAGAAGAG 58.316 38.462 3.65 0.00 29.42 2.85
275 276 7.293299 TCCAAACCATATGATCCATAGAAGAGT 59.707 37.037 3.65 0.00 29.42 3.24
276 277 7.389884 CCAAACCATATGATCCATAGAAGAGTG 59.610 40.741 3.65 0.00 29.42 3.51
277 278 6.617782 ACCATATGATCCATAGAAGAGTGG 57.382 41.667 3.65 0.00 36.82 4.00
285 286 4.163427 TCCATAGAAGAGTGGATGATCCC 58.837 47.826 9.36 0.24 39.51 3.85
286 287 3.262915 CCATAGAAGAGTGGATGATCCCC 59.737 52.174 9.36 0.00 37.72 4.81
287 288 2.575921 AGAAGAGTGGATGATCCCCA 57.424 50.000 9.36 0.22 35.03 4.96
288 289 2.850833 AGAAGAGTGGATGATCCCCAA 58.149 47.619 9.36 0.00 35.03 4.12
289 290 3.192944 AGAAGAGTGGATGATCCCCAAA 58.807 45.455 9.36 0.00 35.03 3.28
290 291 3.593328 AGAAGAGTGGATGATCCCCAAAA 59.407 43.478 9.36 0.00 35.03 2.44
291 292 4.044571 AGAAGAGTGGATGATCCCCAAAAA 59.955 41.667 9.36 0.00 35.03 1.94
292 293 4.614967 AGAGTGGATGATCCCCAAAAAT 57.385 40.909 9.36 0.00 35.03 1.82
293 294 4.951603 AGAGTGGATGATCCCCAAAAATT 58.048 39.130 9.36 0.00 35.03 1.82
294 295 4.958581 AGAGTGGATGATCCCCAAAAATTC 59.041 41.667 9.36 0.00 35.03 2.17
295 296 4.033009 AGTGGATGATCCCCAAAAATTCC 58.967 43.478 9.36 0.00 35.03 3.01
296 297 3.774216 GTGGATGATCCCCAAAAATTCCA 59.226 43.478 9.36 0.00 35.03 3.53
297 298 3.774216 TGGATGATCCCCAAAAATTCCAC 59.226 43.478 9.36 0.00 35.03 4.02
298 299 3.134623 GGATGATCCCCAAAAATTCCACC 59.865 47.826 0.00 0.00 0.00 4.61
299 300 2.175202 TGATCCCCAAAAATTCCACCG 58.825 47.619 0.00 0.00 0.00 4.94
300 301 0.901827 ATCCCCAAAAATTCCACCGC 59.098 50.000 0.00 0.00 0.00 5.68
301 302 0.178947 TCCCCAAAAATTCCACCGCT 60.179 50.000 0.00 0.00 0.00 5.52
302 303 0.684535 CCCCAAAAATTCCACCGCTT 59.315 50.000 0.00 0.00 0.00 4.68
303 304 1.896465 CCCCAAAAATTCCACCGCTTA 59.104 47.619 0.00 0.00 0.00 3.09
304 305 2.300437 CCCCAAAAATTCCACCGCTTAA 59.700 45.455 0.00 0.00 0.00 1.85
305 306 3.584834 CCCAAAAATTCCACCGCTTAAG 58.415 45.455 0.00 0.00 0.00 1.85
306 307 2.993220 CCAAAAATTCCACCGCTTAAGC 59.007 45.455 17.83 17.83 37.78 3.09
324 325 4.821589 GGAGGCCGCCGAGTCTTG 62.822 72.222 10.77 0.00 0.00 3.02
325 326 4.070552 GAGGCCGCCGAGTCTTGT 62.071 66.667 3.05 0.00 0.00 3.16
326 327 3.991536 GAGGCCGCCGAGTCTTGTC 62.992 68.421 3.05 0.00 0.00 3.18
328 329 4.373116 GCCGCCGAGTCTTGTCCA 62.373 66.667 0.00 0.00 0.00 4.02
329 330 2.579201 CCGCCGAGTCTTGTCCAT 59.421 61.111 0.00 0.00 0.00 3.41
330 331 1.079127 CCGCCGAGTCTTGTCCATT 60.079 57.895 0.00 0.00 0.00 3.16
331 332 0.174845 CCGCCGAGTCTTGTCCATTA 59.825 55.000 0.00 0.00 0.00 1.90
332 333 1.560923 CGCCGAGTCTTGTCCATTAG 58.439 55.000 0.00 0.00 0.00 1.73
333 334 1.291132 GCCGAGTCTTGTCCATTAGC 58.709 55.000 0.00 0.00 0.00 3.09
334 335 1.941325 CCGAGTCTTGTCCATTAGCC 58.059 55.000 0.00 0.00 0.00 3.93
335 336 1.560923 CGAGTCTTGTCCATTAGCCG 58.439 55.000 0.00 0.00 0.00 5.52
336 337 1.135083 CGAGTCTTGTCCATTAGCCGT 60.135 52.381 0.00 0.00 0.00 5.68
337 338 2.271800 GAGTCTTGTCCATTAGCCGTG 58.728 52.381 0.00 0.00 0.00 4.94
338 339 1.623811 AGTCTTGTCCATTAGCCGTGT 59.376 47.619 0.00 0.00 0.00 4.49
339 340 1.732259 GTCTTGTCCATTAGCCGTGTG 59.268 52.381 0.00 0.00 0.00 3.82
340 341 1.346395 TCTTGTCCATTAGCCGTGTGT 59.654 47.619 0.00 0.00 0.00 3.72
341 342 1.464608 CTTGTCCATTAGCCGTGTGTG 59.535 52.381 0.00 0.00 0.00 3.82
342 343 0.682292 TGTCCATTAGCCGTGTGTGA 59.318 50.000 0.00 0.00 0.00 3.58
343 344 1.070914 TGTCCATTAGCCGTGTGTGAA 59.929 47.619 0.00 0.00 0.00 3.18
344 345 2.290008 TGTCCATTAGCCGTGTGTGAAT 60.290 45.455 0.00 0.00 0.00 2.57
345 346 2.095853 GTCCATTAGCCGTGTGTGAATG 59.904 50.000 0.00 0.00 0.00 2.67
346 347 1.401552 CCATTAGCCGTGTGTGAATGG 59.598 52.381 0.00 0.00 40.32 3.16
347 348 2.083774 CATTAGCCGTGTGTGAATGGT 58.916 47.619 0.00 0.00 0.00 3.55
348 349 1.518325 TTAGCCGTGTGTGAATGGTG 58.482 50.000 0.00 0.00 0.00 4.17
349 350 0.953471 TAGCCGTGTGTGAATGGTGC 60.953 55.000 0.00 0.00 0.00 5.01
350 351 2.953821 CCGTGTGTGAATGGTGCC 59.046 61.111 0.00 0.00 0.00 5.01
351 352 1.896183 CCGTGTGTGAATGGTGCCA 60.896 57.895 0.00 0.00 0.00 4.92
352 353 1.243342 CCGTGTGTGAATGGTGCCAT 61.243 55.000 0.00 0.00 38.46 4.40
353 354 0.109643 CGTGTGTGAATGGTGCCATG 60.110 55.000 4.26 0.00 36.68 3.66
354 355 0.244450 GTGTGTGAATGGTGCCATGG 59.756 55.000 7.63 7.63 36.68 3.66
355 356 0.112025 TGTGTGAATGGTGCCATGGA 59.888 50.000 18.40 0.00 36.68 3.41
356 357 1.272592 TGTGTGAATGGTGCCATGGAT 60.273 47.619 18.40 0.00 36.68 3.41
357 358 1.135527 GTGTGAATGGTGCCATGGATG 59.864 52.381 18.40 0.00 36.68 3.51
358 359 1.005687 TGTGAATGGTGCCATGGATGA 59.994 47.619 18.40 0.00 36.68 2.92
359 360 1.679680 GTGAATGGTGCCATGGATGAG 59.320 52.381 18.40 0.00 36.68 2.90
360 361 1.565288 TGAATGGTGCCATGGATGAGA 59.435 47.619 18.40 0.00 36.68 3.27
361 362 2.025131 TGAATGGTGCCATGGATGAGAA 60.025 45.455 18.40 0.00 36.68 2.87
362 363 3.228453 GAATGGTGCCATGGATGAGAAT 58.772 45.455 18.40 0.00 36.68 2.40
363 364 2.061509 TGGTGCCATGGATGAGAATG 57.938 50.000 18.40 0.00 0.00 2.67
364 365 1.565288 TGGTGCCATGGATGAGAATGA 59.435 47.619 18.40 0.00 0.00 2.57
365 366 2.025131 TGGTGCCATGGATGAGAATGAA 60.025 45.455 18.40 0.00 0.00 2.57
366 367 3.025978 GGTGCCATGGATGAGAATGAAA 58.974 45.455 18.40 0.00 0.00 2.69
367 368 3.448301 GGTGCCATGGATGAGAATGAAAA 59.552 43.478 18.40 0.00 0.00 2.29
368 369 4.427312 GTGCCATGGATGAGAATGAAAAC 58.573 43.478 18.40 0.00 0.00 2.43
369 370 4.082081 GTGCCATGGATGAGAATGAAAACA 60.082 41.667 18.40 0.00 0.00 2.83
370 371 4.527427 TGCCATGGATGAGAATGAAAACAA 59.473 37.500 18.40 0.00 0.00 2.83
371 372 5.188163 TGCCATGGATGAGAATGAAAACAAT 59.812 36.000 18.40 0.00 0.00 2.71
372 373 5.522460 GCCATGGATGAGAATGAAAACAATG 59.478 40.000 18.40 0.00 0.00 2.82
373 374 6.046593 CCATGGATGAGAATGAAAACAATGG 58.953 40.000 5.56 0.00 0.00 3.16
374 375 5.664294 TGGATGAGAATGAAAACAATGGG 57.336 39.130 0.00 0.00 0.00 4.00
375 376 4.081531 TGGATGAGAATGAAAACAATGGGC 60.082 41.667 0.00 0.00 0.00 5.36
376 377 3.959535 TGAGAATGAAAACAATGGGCC 57.040 42.857 0.00 0.00 0.00 5.80
377 378 3.237746 TGAGAATGAAAACAATGGGCCA 58.762 40.909 9.61 9.61 0.00 5.36
378 379 3.645212 TGAGAATGAAAACAATGGGCCAA 59.355 39.130 11.89 0.00 0.00 4.52
379 380 4.286549 TGAGAATGAAAACAATGGGCCAAT 59.713 37.500 11.89 0.00 0.00 3.16
380 381 4.581868 AGAATGAAAACAATGGGCCAATG 58.418 39.130 19.96 19.96 0.00 2.82
381 382 4.286549 AGAATGAAAACAATGGGCCAATGA 59.713 37.500 27.76 5.45 0.00 2.57
382 383 4.847990 ATGAAAACAATGGGCCAATGAT 57.152 36.364 27.76 13.87 0.00 2.45
383 384 3.940319 TGAAAACAATGGGCCAATGATG 58.060 40.909 27.76 17.64 0.00 3.07
393 394 3.583054 CCAATGATGGCACTGGAGT 57.417 52.632 0.00 0.00 44.00 3.85
394 395 1.100510 CCAATGATGGCACTGGAGTG 58.899 55.000 2.19 2.19 44.00 3.51
395 396 1.100510 CAATGATGGCACTGGAGTGG 58.899 55.000 8.82 0.00 45.72 4.00
396 397 0.994247 AATGATGGCACTGGAGTGGA 59.006 50.000 8.82 0.00 45.72 4.02
397 398 0.994247 ATGATGGCACTGGAGTGGAA 59.006 50.000 8.82 0.00 45.72 3.53
398 399 0.325933 TGATGGCACTGGAGTGGAAG 59.674 55.000 8.82 0.00 45.72 3.46
399 400 1.001641 ATGGCACTGGAGTGGAAGC 60.002 57.895 8.82 0.00 45.72 3.86
400 401 1.782201 ATGGCACTGGAGTGGAAGCA 61.782 55.000 8.82 0.00 45.72 3.91
401 402 1.228245 GGCACTGGAGTGGAAGCAA 60.228 57.895 8.82 0.00 45.72 3.91
402 403 0.823356 GGCACTGGAGTGGAAGCAAA 60.823 55.000 8.82 0.00 45.72 3.68
403 404 0.312102 GCACTGGAGTGGAAGCAAAC 59.688 55.000 8.82 0.00 45.72 2.93
404 405 0.588252 CACTGGAGTGGAAGCAAACG 59.412 55.000 0.00 0.00 42.10 3.60
405 406 0.468226 ACTGGAGTGGAAGCAAACGA 59.532 50.000 0.00 0.00 0.00 3.85
406 407 1.072331 ACTGGAGTGGAAGCAAACGAT 59.928 47.619 0.00 0.00 0.00 3.73
407 408 1.466167 CTGGAGTGGAAGCAAACGATG 59.534 52.381 0.00 0.00 0.00 3.84
408 409 1.071542 TGGAGTGGAAGCAAACGATGA 59.928 47.619 0.00 0.00 0.00 2.92
409 410 1.464997 GGAGTGGAAGCAAACGATGAC 59.535 52.381 0.00 0.00 0.00 3.06
410 411 1.126846 GAGTGGAAGCAAACGATGACG 59.873 52.381 0.00 0.00 45.75 4.35
411 412 1.144969 GTGGAAGCAAACGATGACGA 58.855 50.000 0.00 0.00 42.66 4.20
412 413 1.529438 GTGGAAGCAAACGATGACGAA 59.471 47.619 0.00 0.00 42.66 3.85
413 414 1.798223 TGGAAGCAAACGATGACGAAG 59.202 47.619 0.00 0.00 42.66 3.79
414 415 2.066262 GGAAGCAAACGATGACGAAGA 58.934 47.619 0.00 0.00 42.66 2.87
415 416 2.092838 GGAAGCAAACGATGACGAAGAG 59.907 50.000 0.00 0.00 42.66 2.85
416 417 2.724977 AGCAAACGATGACGAAGAGA 57.275 45.000 0.00 0.00 42.66 3.10
417 418 3.026630 AGCAAACGATGACGAAGAGAA 57.973 42.857 0.00 0.00 42.66 2.87
418 419 3.390135 AGCAAACGATGACGAAGAGAAA 58.610 40.909 0.00 0.00 42.66 2.52
419 420 3.997021 AGCAAACGATGACGAAGAGAAAT 59.003 39.130 0.00 0.00 42.66 2.17
420 421 4.092091 AGCAAACGATGACGAAGAGAAATC 59.908 41.667 0.00 0.00 42.66 2.17
421 422 4.143115 GCAAACGATGACGAAGAGAAATCA 60.143 41.667 0.00 0.00 42.66 2.57
422 423 5.614668 GCAAACGATGACGAAGAGAAATCAA 60.615 40.000 0.00 0.00 42.66 2.57
423 424 5.769967 AACGATGACGAAGAGAAATCAAG 57.230 39.130 0.00 0.00 42.66 3.02
424 425 3.614616 ACGATGACGAAGAGAAATCAAGC 59.385 43.478 0.00 0.00 42.66 4.01
425 426 3.301451 CGATGACGAAGAGAAATCAAGCG 60.301 47.826 0.00 0.00 42.66 4.68
426 427 3.297830 TGACGAAGAGAAATCAAGCGA 57.702 42.857 0.00 0.00 0.00 4.93
427 428 3.849911 TGACGAAGAGAAATCAAGCGAT 58.150 40.909 0.00 0.00 0.00 4.58
428 429 3.614176 TGACGAAGAGAAATCAAGCGATG 59.386 43.478 0.00 0.00 30.13 3.84
429 430 2.932614 ACGAAGAGAAATCAAGCGATGG 59.067 45.455 0.00 0.00 30.13 3.51
430 431 3.190079 CGAAGAGAAATCAAGCGATGGA 58.810 45.455 0.00 0.00 30.13 3.41
431 432 3.244814 CGAAGAGAAATCAAGCGATGGAG 59.755 47.826 0.00 0.00 30.13 3.86
432 433 3.191078 AGAGAAATCAAGCGATGGAGG 57.809 47.619 0.00 0.00 30.13 4.30
433 434 1.601430 GAGAAATCAAGCGATGGAGGC 59.399 52.381 0.00 0.00 30.13 4.70
434 435 1.065199 AGAAATCAAGCGATGGAGGCA 60.065 47.619 0.00 0.00 30.13 4.75
435 436 1.745087 GAAATCAAGCGATGGAGGCAA 59.255 47.619 0.00 0.00 30.13 4.52
436 437 2.062971 AATCAAGCGATGGAGGCAAT 57.937 45.000 0.00 0.00 30.13 3.56
437 438 1.315690 ATCAAGCGATGGAGGCAATG 58.684 50.000 0.00 0.00 0.00 2.82
438 439 0.252761 TCAAGCGATGGAGGCAATGA 59.747 50.000 0.00 0.00 0.00 2.57
439 440 1.134007 TCAAGCGATGGAGGCAATGAT 60.134 47.619 0.00 0.00 0.00 2.45
440 441 2.104622 TCAAGCGATGGAGGCAATGATA 59.895 45.455 0.00 0.00 0.00 2.15
441 442 3.079578 CAAGCGATGGAGGCAATGATAT 58.920 45.455 0.00 0.00 0.00 1.63
442 443 3.430042 AGCGATGGAGGCAATGATATT 57.570 42.857 0.00 0.00 0.00 1.28
443 444 3.759581 AGCGATGGAGGCAATGATATTT 58.240 40.909 0.00 0.00 0.00 1.40
444 445 3.504906 AGCGATGGAGGCAATGATATTTG 59.495 43.478 0.00 0.00 0.00 2.32
445 446 3.503363 GCGATGGAGGCAATGATATTTGA 59.497 43.478 0.00 0.00 0.00 2.69
446 447 4.379186 GCGATGGAGGCAATGATATTTGAG 60.379 45.833 0.00 0.00 0.00 3.02
447 448 4.999311 CGATGGAGGCAATGATATTTGAGA 59.001 41.667 0.00 0.00 0.00 3.27
448 449 5.121925 CGATGGAGGCAATGATATTTGAGAG 59.878 44.000 0.00 0.00 0.00 3.20
449 450 5.378230 TGGAGGCAATGATATTTGAGAGT 57.622 39.130 0.00 0.00 0.00 3.24
450 451 5.128205 TGGAGGCAATGATATTTGAGAGTG 58.872 41.667 0.00 0.00 0.00 3.51
451 452 4.023365 GGAGGCAATGATATTTGAGAGTGC 60.023 45.833 0.00 0.00 0.00 4.40
452 453 4.789807 AGGCAATGATATTTGAGAGTGCT 58.210 39.130 0.00 0.00 0.00 4.40
453 454 5.933617 AGGCAATGATATTTGAGAGTGCTA 58.066 37.500 0.00 0.00 0.00 3.49
454 455 6.540995 AGGCAATGATATTTGAGAGTGCTAT 58.459 36.000 0.00 0.00 0.00 2.97
455 456 6.430308 AGGCAATGATATTTGAGAGTGCTATG 59.570 38.462 0.00 0.00 0.00 2.23
456 457 6.206243 GGCAATGATATTTGAGAGTGCTATGT 59.794 38.462 0.00 0.00 0.00 2.29
457 458 7.388776 GGCAATGATATTTGAGAGTGCTATGTA 59.611 37.037 0.00 0.00 0.00 2.29
458 459 8.944029 GCAATGATATTTGAGAGTGCTATGTAT 58.056 33.333 0.00 0.00 0.00 2.29
468 469 9.591792 TTGAGAGTGCTATGTATTCATATATGC 57.408 33.333 7.92 0.00 36.18 3.14
469 470 8.752187 TGAGAGTGCTATGTATTCATATATGCA 58.248 33.333 7.92 0.00 36.18 3.96
470 471 8.939201 AGAGTGCTATGTATTCATATATGCAC 57.061 34.615 19.09 19.09 45.71 4.57
493 494 6.020440 CACTTTTGTTTGTAGTTGTGATGCAG 60.020 38.462 0.00 0.00 0.00 4.41
494 495 5.574891 TTTGTTTGTAGTTGTGATGCAGT 57.425 34.783 0.00 0.00 0.00 4.40
514 515 6.456447 CAGTATGCTTGTGGTTTGAATTTG 57.544 37.500 0.00 0.00 0.00 2.32
515 516 6.215121 CAGTATGCTTGTGGTTTGAATTTGA 58.785 36.000 0.00 0.00 0.00 2.69
516 517 6.700960 CAGTATGCTTGTGGTTTGAATTTGAA 59.299 34.615 0.00 0.00 0.00 2.69
517 518 6.925165 AGTATGCTTGTGGTTTGAATTTGAAG 59.075 34.615 0.00 0.00 0.00 3.02
518 519 5.083533 TGCTTGTGGTTTGAATTTGAAGT 57.916 34.783 0.00 0.00 0.00 3.01
519 520 5.486526 TGCTTGTGGTTTGAATTTGAAGTT 58.513 33.333 0.00 0.00 0.00 2.66
520 521 5.350914 TGCTTGTGGTTTGAATTTGAAGTTG 59.649 36.000 0.00 0.00 0.00 3.16
521 522 5.580297 GCTTGTGGTTTGAATTTGAAGTTGA 59.420 36.000 0.00 0.00 0.00 3.18
596 607 7.926674 TTGATCATGGATTGTATGCGATTAT 57.073 32.000 0.00 0.00 0.00 1.28
599 610 8.477256 TGATCATGGATTGTATGCGATTATAGA 58.523 33.333 0.00 0.00 0.00 1.98
600 611 8.883954 ATCATGGATTGTATGCGATTATAGAG 57.116 34.615 0.00 0.00 0.00 2.43
601 612 6.758416 TCATGGATTGTATGCGATTATAGAGC 59.242 38.462 0.00 0.00 0.00 4.09
615 626 7.522399 GCGATTATAGAGCAAGAGAAGAAGGTA 60.522 40.741 0.00 0.00 0.00 3.08
646 657 1.947456 GGCCTCCGGTTTTACATCATC 59.053 52.381 0.00 0.00 0.00 2.92
651 662 5.049405 GCCTCCGGTTTTACATCATCTATTG 60.049 44.000 0.00 0.00 0.00 1.90
664 675 3.776969 TCATCTATTGAAGTGCCAGGAGT 59.223 43.478 0.00 0.00 0.00 3.85
666 677 3.173151 TCTATTGAAGTGCCAGGAGTCA 58.827 45.455 0.00 0.00 0.00 3.41
669 680 1.112916 TGAAGTGCCAGGAGTCACGA 61.113 55.000 0.00 0.00 38.19 4.35
671 682 0.036952 AAGTGCCAGGAGTCACGATG 60.037 55.000 0.00 0.00 38.19 3.84
672 683 0.900182 AGTGCCAGGAGTCACGATGA 60.900 55.000 0.00 0.00 38.19 2.92
692 703 5.168526 TGACAAAAACGTCAGGAATGAAG 57.831 39.130 0.00 0.00 40.94 3.02
693 704 4.638421 TGACAAAAACGTCAGGAATGAAGT 59.362 37.500 0.00 0.00 40.94 3.01
694 705 4.920376 ACAAAAACGTCAGGAATGAAGTG 58.080 39.130 0.00 0.00 31.34 3.16
695 706 4.398044 ACAAAAACGTCAGGAATGAAGTGT 59.602 37.500 0.00 0.00 31.34 3.55
696 707 5.587043 ACAAAAACGTCAGGAATGAAGTGTA 59.413 36.000 0.00 0.00 31.34 2.90
698 709 5.862924 AAACGTCAGGAATGAAGTGTATG 57.137 39.130 0.00 0.00 31.34 2.39
699 710 3.861840 ACGTCAGGAATGAAGTGTATGG 58.138 45.455 0.00 0.00 0.00 2.74
700 711 3.260884 ACGTCAGGAATGAAGTGTATGGT 59.739 43.478 0.00 0.00 0.00 3.55
701 712 3.618594 CGTCAGGAATGAAGTGTATGGTG 59.381 47.826 0.00 0.00 0.00 4.17
702 713 3.375299 GTCAGGAATGAAGTGTATGGTGC 59.625 47.826 0.00 0.00 0.00 5.01
704 715 2.024414 GGAATGAAGTGTATGGTGCCC 58.976 52.381 0.00 0.00 0.00 5.36
706 717 3.118038 GGAATGAAGTGTATGGTGCCCTA 60.118 47.826 0.00 0.00 0.00 3.53
707 718 4.523083 GAATGAAGTGTATGGTGCCCTAA 58.477 43.478 0.00 0.00 0.00 2.69
709 720 5.904984 ATGAAGTGTATGGTGCCCTAATA 57.095 39.130 0.00 0.00 0.00 0.98
710 721 5.702065 TGAAGTGTATGGTGCCCTAATAA 57.298 39.130 0.00 0.00 0.00 1.40
711 722 5.433526 TGAAGTGTATGGTGCCCTAATAAC 58.566 41.667 0.00 0.00 0.00 1.89
714 725 2.148768 GTATGGTGCCCTAATAACGCC 58.851 52.381 0.00 0.00 34.48 5.68
715 726 1.992037 TGGTGCCCTAATAACGCCA 59.008 52.632 0.00 0.00 41.50 5.69
716 727 0.107410 TGGTGCCCTAATAACGCCAG 60.107 55.000 0.00 0.00 38.99 4.85
739 1589 0.890542 TGGAGTGCTTCATGCCACAC 60.891 55.000 11.68 8.21 42.00 3.82
744 1594 1.100463 TGCTTCATGCCACACGTGTT 61.100 50.000 20.79 0.52 42.00 3.32
747 1597 1.870402 CTTCATGCCACACGTGTTACA 59.130 47.619 20.79 20.00 36.60 2.41
759 1609 6.073494 CCACACGTGTTACACTTATCATTTGA 60.073 38.462 20.79 0.00 31.34 2.69
761 1611 7.320324 CACACGTGTTACACTTATCATTTGAAC 59.680 37.037 20.79 0.00 31.34 3.18
762 1612 7.011576 ACACGTGTTACACTTATCATTTGAACA 59.988 33.333 17.22 0.00 31.34 3.18
763 1613 7.530525 CACGTGTTACACTTATCATTTGAACAG 59.469 37.037 13.86 0.00 31.34 3.16
808 1662 8.138074 GCAGAGAAGTAACAAGGAAAGAAAAAT 58.862 33.333 0.00 0.00 0.00 1.82
826 1680 9.720769 AAGAAAAATAACTACAGGAGATTCGAA 57.279 29.630 0.00 0.00 0.00 3.71
827 1681 9.720769 AGAAAAATAACTACAGGAGATTCGAAA 57.279 29.630 0.00 0.00 0.00 3.46
959 1814 4.468689 GCCCCCACACGGAGCTAC 62.469 72.222 0.00 0.00 0.00 3.58
960 1815 4.143333 CCCCCACACGGAGCTACG 62.143 72.222 19.02 19.02 40.31 3.51
1063 1930 3.570638 CATTGGAGAGCCGCTGCG 61.571 66.667 16.34 16.34 44.33 5.18
1185 2052 1.953686 GTGATCTCCTCCTCCTCTTCG 59.046 57.143 0.00 0.00 0.00 3.79
1191 2058 1.671901 CCTCCTCCTCTTCGGCTCAC 61.672 65.000 0.00 0.00 0.00 3.51
1232 2099 4.373116 GCTTGCCGTCGGGACTGA 62.373 66.667 14.38 0.00 34.06 3.41
1304 2171 3.187058 CCGGTTTCTCGGCATTGG 58.813 61.111 0.00 0.00 43.71 3.16
1325 2192 0.535335 TCGTCCGAATTTGGGAGGAG 59.465 55.000 16.02 5.33 41.95 3.69
1420 2287 7.255277 GCGGGAGAAAATTAGCAAGAGAATTAT 60.255 37.037 0.00 0.00 0.00 1.28
1442 2309 1.676916 CGGACTGCCACTGATCATGTT 60.677 52.381 0.00 0.00 0.00 2.71
1452 2324 0.611618 TGATCATGTTGGTGGTGCCC 60.612 55.000 0.00 0.00 36.04 5.36
1706 2614 3.256383 TGAGAGCATTTTGGGTTGTCATG 59.744 43.478 0.00 0.00 0.00 3.07
1757 2665 3.421919 AGTCCCGTCTACTAGGATAGC 57.578 52.381 0.00 0.00 44.39 2.97
1851 3104 9.962809 AAGTAGTAGTCAACTAGTCAGTATTCT 57.037 33.333 0.00 0.00 42.46 2.40
1926 3179 0.821517 TGTGTACCACTAGGGATGCG 59.178 55.000 0.00 0.00 41.15 4.73
1967 3220 7.568349 TGCTTCATTTCTGTATCTAGAACCAT 58.432 34.615 0.00 0.00 36.48 3.55
1968 3221 7.496920 TGCTTCATTTCTGTATCTAGAACCATG 59.503 37.037 0.00 0.00 36.48 3.66
1969 3222 7.041508 GCTTCATTTCTGTATCTAGAACCATGG 60.042 40.741 11.19 11.19 36.48 3.66
1970 3223 7.437713 TCATTTCTGTATCTAGAACCATGGT 57.562 36.000 13.00 13.00 36.48 3.55
1971 3224 8.547481 TCATTTCTGTATCTAGAACCATGGTA 57.453 34.615 20.12 1.36 36.48 3.25
1972 3225 8.642432 TCATTTCTGTATCTAGAACCATGGTAG 58.358 37.037 20.12 12.57 36.48 3.18
1973 3226 6.978674 TTCTGTATCTAGAACCATGGTAGG 57.021 41.667 20.12 8.78 32.02 3.18
1974 3227 6.275692 TCTGTATCTAGAACCATGGTAGGA 57.724 41.667 20.12 13.86 0.00 2.94
2010 3263 1.133668 CCATTTAGAAGGGCCCCTGAG 60.134 57.143 21.43 0.00 32.13 3.35
2120 3373 7.384124 CAAGTTGTCGATAAAACAGATACTCG 58.616 38.462 0.00 0.00 0.00 4.18
2171 3424 6.389830 ACATTGAGTTTGCATGTACTTGAA 57.610 33.333 12.65 0.00 0.00 2.69
2176 3429 7.697352 TGAGTTTGCATGTACTTGAATTTTG 57.303 32.000 12.65 0.00 0.00 2.44
2332 3588 7.788026 TCTGTTTACGTTCCATATATCCAGTT 58.212 34.615 0.00 0.00 0.00 3.16
2373 3629 9.838339 ATTTGTTCTATCGACCAAGAGATAAAT 57.162 29.630 0.00 0.00 0.00 1.40
2376 3632 8.909923 TGTTCTATCGACCAAGAGATAAATACA 58.090 33.333 0.00 0.00 0.00 2.29
2403 3659 1.559065 TTCTTACTGGCCTTCCCGGG 61.559 60.000 16.85 16.85 44.91 5.73
2407 3667 1.428718 TACTGGCCTTCCCGGGTTTT 61.429 55.000 22.86 0.00 44.91 2.43
2445 3705 3.869065 TCTAGAGGCCACGGTTTTTATG 58.131 45.455 5.01 0.00 0.00 1.90
2499 3759 6.899089 TGAAGATGGGAAGCATATAGTTTCA 58.101 36.000 0.00 0.00 39.01 2.69
2523 3783 8.236586 TCATTTTTGAATGACAGATAGGAAACG 58.763 33.333 0.00 0.00 34.50 3.60
2557 3817 8.129211 ACAACTAACAAGAGAAAAGTAATGTGC 58.871 33.333 0.00 0.00 0.00 4.57
2662 3922 6.926272 GGTACTCATCAGCTGAAAATAGTAGG 59.074 42.308 22.50 6.19 32.14 3.18
2705 3966 5.357257 AGTAGCACACCCATTACGATTTAG 58.643 41.667 0.00 0.00 0.00 1.85
2743 4005 7.913674 AATCCAGAAACTAGCAGTAGAAAAG 57.086 36.000 0.00 0.00 0.00 2.27
2744 4006 5.238583 TCCAGAAACTAGCAGTAGAAAAGC 58.761 41.667 0.00 0.00 0.00 3.51
2745 4007 5.012148 TCCAGAAACTAGCAGTAGAAAAGCT 59.988 40.000 0.00 0.00 42.14 3.74
2746 4008 5.703130 CCAGAAACTAGCAGTAGAAAAGCTT 59.297 40.000 0.00 0.00 39.68 3.74
2885 4155 6.054860 ACATTGGACAATAGTAGCTTCTGT 57.945 37.500 2.65 0.00 0.00 3.41
2923 4193 8.169977 TCAAACTCTATTGCTCAAACATTTCT 57.830 30.769 0.00 0.00 0.00 2.52
2927 4198 6.151817 ACTCTATTGCTCAAACATTTCTTCCC 59.848 38.462 0.00 0.00 0.00 3.97
2934 4205 7.734942 TGCTCAAACATTTCTTCCCTAAAAAT 58.265 30.769 0.00 0.00 0.00 1.82
2935 4206 7.656948 TGCTCAAACATTTCTTCCCTAAAAATG 59.343 33.333 5.71 5.71 43.02 2.32
2956 4227 7.992180 AATGACTTTTCACTTTAGTGCTTTG 57.008 32.000 5.00 0.00 45.25 2.77
3018 4289 0.767375 CCATGTCGGGGATGAAGGAT 59.233 55.000 0.00 0.00 0.00 3.24
3019 4290 1.977854 CCATGTCGGGGATGAAGGATA 59.022 52.381 0.00 0.00 0.00 2.59
3036 4307 0.324552 ATACCAATGCTGCTGGGCAA 60.325 50.000 11.99 0.00 45.68 4.52
3082 4353 6.183361 ACCTATGGACCAAAGTGGAGATAATC 60.183 42.308 0.00 0.00 40.96 1.75
3114 4385 3.305335 CGGCTCAGCAACAGGTTATTTTT 60.305 43.478 0.00 0.00 0.00 1.94
3192 4465 3.620488 ACTGAGCAACAAAGAAGGTTGA 58.380 40.909 9.26 0.00 46.56 3.18
3262 4535 0.521291 TGTTATGCGCAGGAACAAGC 59.479 50.000 28.62 10.79 30.37 4.01
3285 4558 5.184671 GCAATCAAGAAGAAGTTTGGAGGAT 59.815 40.000 0.00 0.00 0.00 3.24
3466 4739 2.203126 GCTGATTGGGCTCTCGGG 60.203 66.667 0.00 0.00 0.00 5.14
3477 4750 2.037381 GGGCTCTCGGGAAGGTATTAAG 59.963 54.545 0.00 0.00 0.00 1.85
3499 4772 6.215495 AGTTATCCTTCTGTAGCTTCAGTC 57.785 41.667 18.55 3.11 36.85 3.51
3500 4773 5.717178 AGTTATCCTTCTGTAGCTTCAGTCA 59.283 40.000 18.55 7.37 36.85 3.41
3503 4776 6.798427 ATCCTTCTGTAGCTTCAGTCAATA 57.202 37.500 18.55 4.44 36.85 1.90
3693 4976 4.677673 AGTTCAGCTTTGATTTTGCCTT 57.322 36.364 0.00 0.00 0.00 4.35
3709 4992 8.648557 ATTTTGCCTTAAAAAGTTCAGTTCTC 57.351 30.769 0.00 0.00 41.29 2.87
3722 5005 6.644347 AGTTCAGTTCTCTTGAGTTCTGAAA 58.356 36.000 24.57 15.18 41.38 2.69
3863 5148 6.035843 GGTATGTTACTGATGGTTTTGCATG 58.964 40.000 0.00 0.00 0.00 4.06
3870 5155 4.142534 ACTGATGGTTTTGCATGAATCTCG 60.143 41.667 0.00 0.00 0.00 4.04
3877 5162 5.691754 GGTTTTGCATGAATCTCGTCTTTTT 59.308 36.000 0.00 0.00 0.00 1.94
3880 5165 8.915654 GTTTTGCATGAATCTCGTCTTTTTAAT 58.084 29.630 0.00 0.00 0.00 1.40
3882 5167 6.029607 TGCATGAATCTCGTCTTTTTAATGC 58.970 36.000 0.00 0.00 37.72 3.56
3893 5178 5.732647 CGTCTTTTTAATGCGTAATGACCTG 59.267 40.000 0.00 0.00 0.00 4.00
3904 5189 3.431626 CGTAATGACCTGCCTACCAATCA 60.432 47.826 0.00 0.00 0.00 2.57
3906 5191 0.253044 TGACCTGCCTACCAATCAGC 59.747 55.000 0.00 0.00 0.00 4.26
4020 5305 1.464997 GATCAACAGCGTGGAAACTCC 59.535 52.381 0.00 0.00 36.96 3.85
4038 5323 2.954753 CTGTTGTCGGTGCGAAGGC 61.955 63.158 0.00 0.00 37.72 4.35
4135 5420 7.010552 CCATAGATAAGAAAAGAGACGGTTGTG 59.989 40.741 0.00 0.00 0.00 3.33
4165 5450 3.358707 GCGGCTGCGGGTTTGTAA 61.359 61.111 0.00 0.00 0.00 2.41
4197 5482 1.681780 GCTACCTTGCTATGTGCCCAA 60.682 52.381 0.00 0.00 42.00 4.12
4198 5483 2.722094 CTACCTTGCTATGTGCCCAAA 58.278 47.619 0.00 0.00 42.00 3.28
4199 5484 2.236489 ACCTTGCTATGTGCCCAAAT 57.764 45.000 0.00 0.00 42.00 2.32
4200 5485 1.826720 ACCTTGCTATGTGCCCAAATG 59.173 47.619 0.00 0.00 42.00 2.32
4201 5486 1.826720 CCTTGCTATGTGCCCAAATGT 59.173 47.619 0.00 0.00 42.00 2.71
4202 5487 2.234414 CCTTGCTATGTGCCCAAATGTT 59.766 45.455 0.00 0.00 42.00 2.71
4203 5488 3.446873 CCTTGCTATGTGCCCAAATGTTA 59.553 43.478 0.00 0.00 42.00 2.41
4204 5489 4.423732 CTTGCTATGTGCCCAAATGTTAC 58.576 43.478 0.00 0.00 42.00 2.50
4205 5490 3.696045 TGCTATGTGCCCAAATGTTACT 58.304 40.909 0.00 0.00 42.00 2.24
4206 5491 3.443329 TGCTATGTGCCCAAATGTTACTG 59.557 43.478 0.00 0.00 42.00 2.74
4250 5535 8.370940 GTCCTATTTGTGAATGGATATCTCTGA 58.629 37.037 2.05 0.00 30.52 3.27
4260 5545 8.896744 TGAATGGATATCTCTGATTTTGAACAC 58.103 33.333 2.05 0.00 0.00 3.32
4269 5554 4.520111 TCTGATTTTGAACACCCAGTGATG 59.480 41.667 0.96 0.00 36.96 3.07
4281 5566 2.427453 CCCAGTGATGAGCGTACTACTT 59.573 50.000 0.00 0.00 0.00 2.24
4282 5567 3.630769 CCCAGTGATGAGCGTACTACTTA 59.369 47.826 0.00 0.00 0.00 2.24
4294 5581 5.184479 AGCGTACTACTTAACCATTCTGACA 59.816 40.000 0.00 0.00 0.00 3.58
4296 5583 6.198591 GCGTACTACTTAACCATTCTGACATC 59.801 42.308 0.00 0.00 0.00 3.06
4305 5592 3.328931 ACCATTCTGACATCCTGAGTTGT 59.671 43.478 0.00 0.00 0.00 3.32
4308 5595 3.667497 TCTGACATCCTGAGTTGTGTC 57.333 47.619 0.00 0.00 40.93 3.67
4309 5596 3.234353 TCTGACATCCTGAGTTGTGTCT 58.766 45.455 9.44 0.00 41.08 3.41
4310 5597 3.006217 TCTGACATCCTGAGTTGTGTCTG 59.994 47.826 9.44 8.99 41.08 3.51
4311 5598 2.037641 TGACATCCTGAGTTGTGTCTGG 59.962 50.000 9.44 0.00 41.08 3.86
4312 5599 1.271054 ACATCCTGAGTTGTGTCTGGC 60.271 52.381 0.00 0.00 35.91 4.85
4330 5634 1.421485 CCTTCTGAATGTGCGTCGC 59.579 57.895 11.10 11.10 0.00 5.19
4334 5638 0.443478 TCTGAATGTGCGTCGCATTG 59.557 50.000 24.65 9.96 43.36 2.82
4336 5640 1.393196 CTGAATGTGCGTCGCATTGTA 59.607 47.619 24.65 10.77 43.36 2.41
4337 5641 2.006169 TGAATGTGCGTCGCATTGTAT 58.994 42.857 24.65 12.57 43.36 2.29
4338 5642 2.222999 TGAATGTGCGTCGCATTGTATG 60.223 45.455 24.65 0.00 43.36 2.39
4387 5696 2.039624 GCACAGAGGGAGGGGAGA 59.960 66.667 0.00 0.00 0.00 3.71
4397 5706 0.105913 GGAGGGGAGAGGAGGTACAG 60.106 65.000 0.00 0.00 0.00 2.74
4401 5710 1.116308 GGGAGAGGAGGTACAGAAGC 58.884 60.000 0.00 0.00 0.00 3.86
4419 5728 2.443416 AGCGGGGAAACATTCTAAACC 58.557 47.619 0.00 0.00 0.00 3.27
4460 5769 3.081061 AGCCACAAACGAATAGCATCAA 58.919 40.909 0.00 0.00 0.00 2.57
4589 5898 2.699321 TCTCTGCTTGGAGATGGAGATG 59.301 50.000 0.00 0.00 37.43 2.90
4594 5903 1.699054 TTGGAGATGGAGATGGGCCG 61.699 60.000 0.00 0.00 0.00 6.13
4617 5926 3.909662 CCATGGTCAGGCTTTCGG 58.090 61.111 2.57 0.00 0.00 4.30
4665 5974 6.349860 GGATTTGAAACGGCCTGTAAAATACT 60.350 38.462 0.00 0.00 0.00 2.12
4666 5975 5.616488 TTGAAACGGCCTGTAAAATACTC 57.384 39.130 0.00 0.00 0.00 2.59
4668 5977 4.933400 TGAAACGGCCTGTAAAATACTCTC 59.067 41.667 0.00 0.00 0.00 3.20
4669 5978 4.820894 AACGGCCTGTAAAATACTCTCT 57.179 40.909 0.00 0.00 0.00 3.10
4724 6125 8.552083 AAGAAATTAAGGTTGATGCCAATTTC 57.448 30.769 8.73 8.73 39.11 2.17
4728 6129 2.181975 AGGTTGATGCCAATTTCCTGG 58.818 47.619 0.00 0.00 39.71 4.45
4742 6143 1.999648 TCCTGGCAGCATTTTTCTGT 58.000 45.000 9.56 0.00 34.21 3.41
4760 6163 4.836825 TCTGTCATGAAAAGGATGGTCTC 58.163 43.478 0.00 0.00 0.00 3.36
4804 6209 2.223203 GGCATTGATTCGAGCTCAACAG 60.223 50.000 15.40 10.43 35.57 3.16
4854 6422 4.081406 AGATGCTAGATGCCTAGACAGAG 58.919 47.826 0.00 0.00 44.00 3.35
4865 6433 0.796927 TAGACAGAGTCAGTCGTGCG 59.203 55.000 9.74 0.00 40.84 5.34
5041 6618 4.140599 CCAGGAAGCTCGCTCGCT 62.141 66.667 0.00 0.00 43.31 4.93
5042 6619 2.581953 CAGGAAGCTCGCTCGCTC 60.582 66.667 0.00 0.00 39.86 5.03
5043 6620 4.186433 AGGAAGCTCGCTCGCTCG 62.186 66.667 0.00 0.00 39.86 5.03
5047 6624 4.724602 AGCTCGCTCGCTCGCAAA 62.725 61.111 0.00 0.00 34.57 3.68
5048 6625 4.202196 GCTCGCTCGCTCGCAAAG 62.202 66.667 0.00 0.00 0.00 2.77
5070 6659 3.131709 AGATGACTTGACAACACCAGG 57.868 47.619 0.00 0.00 0.00 4.45
5125 6716 0.321919 GGCAGGCATGACAACTCTCA 60.322 55.000 0.62 0.00 33.09 3.27
5140 6732 2.098280 ACTCTCACCGATCTTGATCACG 59.902 50.000 10.69 0.00 0.00 4.35
5185 6777 1.722011 CCATTTCCGAACGTACAGCT 58.278 50.000 0.00 0.00 0.00 4.24
5188 6780 2.060326 TTTCCGAACGTACAGCTGAG 57.940 50.000 23.35 13.56 0.00 3.35
5208 6800 2.672651 CCACCACATTCTGCGGCA 60.673 61.111 1.29 1.29 0.00 5.69
5212 6804 2.562912 CACATTCTGCGGCACCAC 59.437 61.111 0.00 0.00 0.00 4.16
5217 6809 0.823356 ATTCTGCGGCACCACAAGTT 60.823 50.000 0.00 0.00 0.00 2.66
5218 6810 1.034838 TTCTGCGGCACCACAAGTTT 61.035 50.000 0.00 0.00 0.00 2.66
5219 6811 1.034838 TCTGCGGCACCACAAGTTTT 61.035 50.000 0.00 0.00 0.00 2.43
5220 6812 0.179113 CTGCGGCACCACAAGTTTTT 60.179 50.000 0.00 0.00 0.00 1.94
5240 6832 3.945981 TTTTTCGAAAAGGGGTATGCC 57.054 42.857 21.53 0.00 0.00 4.40
5254 6846 4.670199 TGCCCCTGCATCTGAATG 57.330 55.556 0.00 0.00 44.23 2.67
5255 6847 2.000983 TGCCCCTGCATCTGAATGA 58.999 52.632 0.00 0.00 44.23 2.57
5256 6848 0.554305 TGCCCCTGCATCTGAATGAT 59.446 50.000 0.00 0.00 44.23 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.003482 GCTCCTATGCTTCTGAATTGCTG 59.997 47.826 3.72 0.00 0.00 4.41
1 2 3.212685 GCTCCTATGCTTCTGAATTGCT 58.787 45.455 3.72 0.00 0.00 3.91
2 3 2.032204 CGCTCCTATGCTTCTGAATTGC 60.032 50.000 0.00 0.00 0.00 3.56
3 4 3.002042 CACGCTCCTATGCTTCTGAATTG 59.998 47.826 0.00 0.00 0.00 2.32
4 5 3.201290 CACGCTCCTATGCTTCTGAATT 58.799 45.455 0.00 0.00 0.00 2.17
5 6 2.484417 CCACGCTCCTATGCTTCTGAAT 60.484 50.000 0.00 0.00 0.00 2.57
6 7 1.134699 CCACGCTCCTATGCTTCTGAA 60.135 52.381 0.00 0.00 0.00 3.02
7 8 0.461548 CCACGCTCCTATGCTTCTGA 59.538 55.000 0.00 0.00 0.00 3.27
8 9 0.176680 ACCACGCTCCTATGCTTCTG 59.823 55.000 0.00 0.00 0.00 3.02
9 10 0.176680 CACCACGCTCCTATGCTTCT 59.823 55.000 0.00 0.00 0.00 2.85
10 11 0.811616 CCACCACGCTCCTATGCTTC 60.812 60.000 0.00 0.00 0.00 3.86
11 12 1.221840 CCACCACGCTCCTATGCTT 59.778 57.895 0.00 0.00 0.00 3.91
12 13 2.903357 CCACCACGCTCCTATGCT 59.097 61.111 0.00 0.00 0.00 3.79
13 14 2.897350 GCCACCACGCTCCTATGC 60.897 66.667 0.00 0.00 0.00 3.14
14 15 0.464373 AATGCCACCACGCTCCTATG 60.464 55.000 0.00 0.00 0.00 2.23
15 16 0.179045 GAATGCCACCACGCTCCTAT 60.179 55.000 0.00 0.00 0.00 2.57
16 17 1.220749 GAATGCCACCACGCTCCTA 59.779 57.895 0.00 0.00 0.00 2.94
17 18 2.045926 GAATGCCACCACGCTCCT 60.046 61.111 0.00 0.00 0.00 3.69
18 19 1.648467 GAAGAATGCCACCACGCTCC 61.648 60.000 0.00 0.00 0.00 4.70
19 20 1.796796 GAAGAATGCCACCACGCTC 59.203 57.895 0.00 0.00 0.00 5.03
20 21 2.034879 CGAAGAATGCCACCACGCT 61.035 57.895 0.00 0.00 0.00 5.07
21 22 2.480555 CGAAGAATGCCACCACGC 59.519 61.111 0.00 0.00 0.00 5.34
22 23 1.361668 CTCCGAAGAATGCCACCACG 61.362 60.000 0.00 0.00 0.00 4.94
23 24 1.648467 GCTCCGAAGAATGCCACCAC 61.648 60.000 0.00 0.00 0.00 4.16
24 25 1.377202 GCTCCGAAGAATGCCACCA 60.377 57.895 0.00 0.00 0.00 4.17
25 26 2.464459 CGCTCCGAAGAATGCCACC 61.464 63.158 0.00 0.00 0.00 4.61
26 27 3.093278 CGCTCCGAAGAATGCCAC 58.907 61.111 0.00 0.00 0.00 5.01
27 28 2.819595 GCGCTCCGAAGAATGCCA 60.820 61.111 0.00 0.00 0.00 4.92
28 29 3.929948 CGCGCTCCGAAGAATGCC 61.930 66.667 5.56 0.00 40.02 4.40
29 30 4.581648 GCGCGCTCCGAAGAATGC 62.582 66.667 26.67 0.00 40.02 3.56
30 31 3.929948 GGCGCGCTCCGAAGAATG 61.930 66.667 32.29 0.00 40.02 2.67
73 74 3.558931 TGCCAACAACATCCTATCGAT 57.441 42.857 2.16 2.16 0.00 3.59
74 75 3.558931 ATGCCAACAACATCCTATCGA 57.441 42.857 0.00 0.00 0.00 3.59
75 76 4.637483 AAATGCCAACAACATCCTATCG 57.363 40.909 0.00 0.00 0.00 2.92
96 97 6.128418 CGCCCAAAAGAAAAACAAGAGAAAAA 60.128 34.615 0.00 0.00 0.00 1.94
97 98 5.350091 CGCCCAAAAGAAAAACAAGAGAAAA 59.650 36.000 0.00 0.00 0.00 2.29
98 99 4.867608 CGCCCAAAAGAAAAACAAGAGAAA 59.132 37.500 0.00 0.00 0.00 2.52
99 100 4.081917 ACGCCCAAAAGAAAAACAAGAGAA 60.082 37.500 0.00 0.00 0.00 2.87
100 101 3.445805 ACGCCCAAAAGAAAAACAAGAGA 59.554 39.130 0.00 0.00 0.00 3.10
101 102 3.551485 CACGCCCAAAAGAAAAACAAGAG 59.449 43.478 0.00 0.00 0.00 2.85
102 103 3.193691 TCACGCCCAAAAGAAAAACAAGA 59.806 39.130 0.00 0.00 0.00 3.02
103 104 3.516615 TCACGCCCAAAAGAAAAACAAG 58.483 40.909 0.00 0.00 0.00 3.16
104 105 3.594603 TCACGCCCAAAAGAAAAACAA 57.405 38.095 0.00 0.00 0.00 2.83
105 106 3.810310 ATCACGCCCAAAAGAAAAACA 57.190 38.095 0.00 0.00 0.00 2.83
106 107 3.868661 ACAATCACGCCCAAAAGAAAAAC 59.131 39.130 0.00 0.00 0.00 2.43
107 108 4.130286 ACAATCACGCCCAAAAGAAAAA 57.870 36.364 0.00 0.00 0.00 1.94
108 109 3.810310 ACAATCACGCCCAAAAGAAAA 57.190 38.095 0.00 0.00 0.00 2.29
109 110 3.886505 AGTACAATCACGCCCAAAAGAAA 59.113 39.130 0.00 0.00 0.00 2.52
110 111 3.252215 CAGTACAATCACGCCCAAAAGAA 59.748 43.478 0.00 0.00 0.00 2.52
111 112 2.811431 CAGTACAATCACGCCCAAAAGA 59.189 45.455 0.00 0.00 0.00 2.52
112 113 2.552315 ACAGTACAATCACGCCCAAAAG 59.448 45.455 0.00 0.00 0.00 2.27
113 114 2.577700 ACAGTACAATCACGCCCAAAA 58.422 42.857 0.00 0.00 0.00 2.44
114 115 2.264005 ACAGTACAATCACGCCCAAA 57.736 45.000 0.00 0.00 0.00 3.28
115 116 2.264005 AACAGTACAATCACGCCCAA 57.736 45.000 0.00 0.00 0.00 4.12
116 117 1.876799 CAAACAGTACAATCACGCCCA 59.123 47.619 0.00 0.00 0.00 5.36
117 118 1.401018 GCAAACAGTACAATCACGCCC 60.401 52.381 0.00 0.00 0.00 6.13
118 119 1.401018 GGCAAACAGTACAATCACGCC 60.401 52.381 0.00 0.00 0.00 5.68
119 120 1.401018 GGGCAAACAGTACAATCACGC 60.401 52.381 0.00 0.00 0.00 5.34
120 121 1.199097 GGGGCAAACAGTACAATCACG 59.801 52.381 0.00 0.00 0.00 4.35
121 122 2.228822 CTGGGGCAAACAGTACAATCAC 59.771 50.000 0.00 0.00 0.00 3.06
122 123 2.513753 CTGGGGCAAACAGTACAATCA 58.486 47.619 0.00 0.00 0.00 2.57
123 124 1.202348 GCTGGGGCAAACAGTACAATC 59.798 52.381 0.00 0.00 38.22 2.67
124 125 1.256812 GCTGGGGCAAACAGTACAAT 58.743 50.000 0.00 0.00 38.22 2.71
125 126 1.169661 CGCTGGGGCAAACAGTACAA 61.170 55.000 0.00 0.00 38.22 2.41
126 127 1.599518 CGCTGGGGCAAACAGTACA 60.600 57.895 0.00 0.00 38.22 2.90
127 128 0.676782 ATCGCTGGGGCAAACAGTAC 60.677 55.000 5.25 0.00 38.22 2.73
128 129 0.676466 CATCGCTGGGGCAAACAGTA 60.676 55.000 5.25 0.00 38.22 2.74
129 130 1.973281 CATCGCTGGGGCAAACAGT 60.973 57.895 5.25 0.00 38.22 3.55
130 131 1.033746 ATCATCGCTGGGGCAAACAG 61.034 55.000 0.00 0.00 38.60 3.16
131 132 1.001020 ATCATCGCTGGGGCAAACA 60.001 52.632 0.00 0.00 38.60 2.83
132 133 1.729881 GATCATCGCTGGGGCAAAC 59.270 57.895 0.00 0.00 38.60 2.93
133 134 1.819208 CGATCATCGCTGGGGCAAA 60.819 57.895 0.00 0.00 38.60 3.68
134 135 2.203056 CGATCATCGCTGGGGCAA 60.203 61.111 0.00 0.00 38.60 4.52
135 136 2.730524 TTCGATCATCGCTGGGGCA 61.731 57.895 0.80 0.00 40.21 5.36
136 137 2.108976 TTCGATCATCGCTGGGGC 59.891 61.111 0.80 0.00 40.21 5.80
137 138 0.877649 CTGTTCGATCATCGCTGGGG 60.878 60.000 0.80 0.00 40.21 4.96
138 139 0.179100 ACTGTTCGATCATCGCTGGG 60.179 55.000 0.80 0.00 40.21 4.45
139 140 1.325640 CAACTGTTCGATCATCGCTGG 59.674 52.381 0.80 0.00 40.21 4.85
140 141 1.995484 ACAACTGTTCGATCATCGCTG 59.005 47.619 0.80 0.00 40.21 5.18
141 142 2.370281 ACAACTGTTCGATCATCGCT 57.630 45.000 0.80 0.00 40.21 4.93
142 143 3.121663 CGATACAACTGTTCGATCATCGC 60.122 47.826 0.80 0.00 40.21 4.58
143 144 3.422217 CCGATACAACTGTTCGATCATCG 59.578 47.826 0.00 0.00 42.10 3.84
144 145 3.736252 CCCGATACAACTGTTCGATCATC 59.264 47.826 12.75 0.00 33.60 2.92
145 146 3.132289 ACCCGATACAACTGTTCGATCAT 59.868 43.478 12.75 0.00 33.60 2.45
146 147 2.494471 ACCCGATACAACTGTTCGATCA 59.506 45.455 12.75 0.00 33.60 2.92
147 148 2.858344 CACCCGATACAACTGTTCGATC 59.142 50.000 12.75 2.03 33.60 3.69
148 149 2.418197 CCACCCGATACAACTGTTCGAT 60.418 50.000 12.75 0.00 33.60 3.59
149 150 1.067425 CCACCCGATACAACTGTTCGA 60.067 52.381 12.75 0.00 33.60 3.71
150 151 1.337447 ACCACCCGATACAACTGTTCG 60.337 52.381 0.00 0.00 0.00 3.95
151 152 2.467566 ACCACCCGATACAACTGTTC 57.532 50.000 0.00 0.00 0.00 3.18
152 153 2.500229 CAACCACCCGATACAACTGTT 58.500 47.619 0.00 0.00 0.00 3.16
153 154 1.880646 GCAACCACCCGATACAACTGT 60.881 52.381 0.00 0.00 0.00 3.55
154 155 0.802494 GCAACCACCCGATACAACTG 59.198 55.000 0.00 0.00 0.00 3.16
155 156 0.690762 AGCAACCACCCGATACAACT 59.309 50.000 0.00 0.00 0.00 3.16
156 157 2.389962 TAGCAACCACCCGATACAAC 57.610 50.000 0.00 0.00 0.00 3.32
157 158 4.967084 ATATAGCAACCACCCGATACAA 57.033 40.909 0.00 0.00 0.00 2.41
158 159 4.967084 AATATAGCAACCACCCGATACA 57.033 40.909 0.00 0.00 0.00 2.29
161 162 9.209048 TCTATATTAATATAGCAACCACCCGAT 57.791 33.333 27.40 0.82 41.14 4.18
162 163 8.598202 TCTATATTAATATAGCAACCACCCGA 57.402 34.615 27.40 11.48 41.14 5.14
163 164 7.926555 CCTCTATATTAATATAGCAACCACCCG 59.073 40.741 27.40 9.82 41.14 5.28
164 165 8.211629 CCCTCTATATTAATATAGCAACCACCC 58.788 40.741 27.40 0.00 41.14 4.61
165 166 8.211629 CCCCTCTATATTAATATAGCAACCACC 58.788 40.741 27.40 0.00 41.14 4.61
166 167 7.715686 GCCCCTCTATATTAATATAGCAACCAC 59.284 40.741 27.40 15.97 41.14 4.16
167 168 7.418597 CGCCCCTCTATATTAATATAGCAACCA 60.419 40.741 27.40 15.08 41.14 3.67
168 169 6.929606 CGCCCCTCTATATTAATATAGCAACC 59.070 42.308 27.40 16.95 41.14 3.77
169 170 7.723324 TCGCCCCTCTATATTAATATAGCAAC 58.277 38.462 27.40 17.27 41.14 4.17
170 171 7.907841 TCGCCCCTCTATATTAATATAGCAA 57.092 36.000 27.40 16.15 41.14 3.91
171 172 7.907841 TTCGCCCCTCTATATTAATATAGCA 57.092 36.000 27.40 18.67 41.14 3.49
172 173 7.385478 GCTTTCGCCCCTCTATATTAATATAGC 59.615 40.741 27.40 19.13 41.14 2.97
173 174 8.819643 GCTTTCGCCCCTCTATATTAATATAG 57.180 38.462 26.72 26.72 42.18 1.31
198 199 2.315925 TTGCTGCCTCTCGAAATAGG 57.684 50.000 0.00 4.18 35.86 2.57
199 200 4.685169 TTTTTGCTGCCTCTCGAAATAG 57.315 40.909 0.00 0.00 0.00 1.73
217 218 4.281941 GCTCCTCCAAAGGTCAAGATTTTT 59.718 41.667 0.00 0.00 43.82 1.94
218 219 3.829026 GCTCCTCCAAAGGTCAAGATTTT 59.171 43.478 0.00 0.00 43.82 1.82
219 220 3.425659 GCTCCTCCAAAGGTCAAGATTT 58.574 45.455 0.00 0.00 43.82 2.17
220 221 2.291217 GGCTCCTCCAAAGGTCAAGATT 60.291 50.000 0.00 0.00 43.82 2.40
221 222 1.283321 GGCTCCTCCAAAGGTCAAGAT 59.717 52.381 0.00 0.00 43.82 2.40
222 223 0.693049 GGCTCCTCCAAAGGTCAAGA 59.307 55.000 0.00 0.00 43.82 3.02
223 224 0.322906 GGGCTCCTCCAAAGGTCAAG 60.323 60.000 0.00 0.00 43.82 3.02
224 225 1.065410 TGGGCTCCTCCAAAGGTCAA 61.065 55.000 0.00 0.00 43.82 3.18
225 226 1.065410 TTGGGCTCCTCCAAAGGTCA 61.065 55.000 0.00 0.00 43.15 4.02
226 227 1.767692 TTGGGCTCCTCCAAAGGTC 59.232 57.895 0.00 0.00 43.15 3.85
227 228 4.018195 TTGGGCTCCTCCAAAGGT 57.982 55.556 0.00 0.00 43.15 3.50
231 232 0.625849 GAAGGATTGGGCTCCTCCAA 59.374 55.000 5.18 0.00 45.15 3.53
232 233 1.281925 GGAAGGATTGGGCTCCTCCA 61.282 60.000 5.18 0.00 45.15 3.86
233 234 1.281925 TGGAAGGATTGGGCTCCTCC 61.282 60.000 0.00 0.00 45.15 4.30
234 235 0.625849 TTGGAAGGATTGGGCTCCTC 59.374 55.000 0.00 0.00 45.15 3.71
236 237 1.186200 GTTTGGAAGGATTGGGCTCC 58.814 55.000 0.00 0.00 35.37 4.70
237 238 1.186200 GGTTTGGAAGGATTGGGCTC 58.814 55.000 0.00 0.00 0.00 4.70
238 239 0.486879 TGGTTTGGAAGGATTGGGCT 59.513 50.000 0.00 0.00 0.00 5.19
239 240 1.571955 ATGGTTTGGAAGGATTGGGC 58.428 50.000 0.00 0.00 0.00 5.36
240 241 4.545678 TCATATGGTTTGGAAGGATTGGG 58.454 43.478 2.13 0.00 0.00 4.12
241 242 5.244626 GGATCATATGGTTTGGAAGGATTGG 59.755 44.000 2.13 0.00 0.00 3.16
242 243 5.834742 TGGATCATATGGTTTGGAAGGATTG 59.165 40.000 2.13 0.00 0.00 2.67
243 244 6.029492 TGGATCATATGGTTTGGAAGGATT 57.971 37.500 2.13 0.00 0.00 3.01
244 245 5.668135 TGGATCATATGGTTTGGAAGGAT 57.332 39.130 2.13 0.00 0.00 3.24
245 246 5.668135 ATGGATCATATGGTTTGGAAGGA 57.332 39.130 2.13 0.00 0.00 3.36
246 247 6.782986 TCTATGGATCATATGGTTTGGAAGG 58.217 40.000 2.13 0.00 0.00 3.46
247 248 8.159447 TCTTCTATGGATCATATGGTTTGGAAG 58.841 37.037 2.13 8.20 0.00 3.46
248 249 8.044574 TCTTCTATGGATCATATGGTTTGGAA 57.955 34.615 2.13 0.00 0.00 3.53
249 250 7.293299 ACTCTTCTATGGATCATATGGTTTGGA 59.707 37.037 2.13 0.00 0.00 3.53
250 251 7.389884 CACTCTTCTATGGATCATATGGTTTGG 59.610 40.741 2.13 0.00 0.00 3.28
251 252 7.389884 CCACTCTTCTATGGATCATATGGTTTG 59.610 40.741 2.13 0.00 38.34 2.93
252 253 7.293299 TCCACTCTTCTATGGATCATATGGTTT 59.707 37.037 2.13 0.00 40.17 3.27
253 254 6.789457 TCCACTCTTCTATGGATCATATGGTT 59.211 38.462 2.13 0.00 40.17 3.67
254 255 6.326161 TCCACTCTTCTATGGATCATATGGT 58.674 40.000 2.13 0.00 40.17 3.55
255 256 6.864151 TCCACTCTTCTATGGATCATATGG 57.136 41.667 2.13 0.00 40.17 2.74
264 265 3.262915 GGGGATCATCCACTCTTCTATGG 59.737 52.174 5.89 0.00 36.87 2.74
265 266 3.906218 TGGGGATCATCCACTCTTCTATG 59.094 47.826 7.67 0.00 41.69 2.23
266 267 4.219392 TGGGGATCATCCACTCTTCTAT 57.781 45.455 7.67 0.00 41.69 1.98
267 268 3.706389 TGGGGATCATCCACTCTTCTA 57.294 47.619 7.67 0.00 41.69 2.10
268 269 2.575921 TGGGGATCATCCACTCTTCT 57.424 50.000 7.67 0.00 41.69 2.85
269 270 3.652057 TTTGGGGATCATCCACTCTTC 57.348 47.619 7.67 0.00 41.69 2.87
270 271 4.402616 TTTTTGGGGATCATCCACTCTT 57.597 40.909 7.67 0.00 41.69 2.85
271 272 4.614967 ATTTTTGGGGATCATCCACTCT 57.385 40.909 7.67 0.00 41.69 3.24
272 273 4.100035 GGAATTTTTGGGGATCATCCACTC 59.900 45.833 7.67 0.00 41.69 3.51
273 274 4.033009 GGAATTTTTGGGGATCATCCACT 58.967 43.478 7.67 0.00 41.69 4.00
274 275 3.774216 TGGAATTTTTGGGGATCATCCAC 59.226 43.478 5.89 1.22 41.45 4.02
275 276 3.774216 GTGGAATTTTTGGGGATCATCCA 59.226 43.478 5.89 3.24 38.64 3.41
276 277 3.134623 GGTGGAATTTTTGGGGATCATCC 59.865 47.826 0.00 0.00 35.23 3.51
277 278 3.181476 CGGTGGAATTTTTGGGGATCATC 60.181 47.826 0.00 0.00 0.00 2.92
278 279 2.765699 CGGTGGAATTTTTGGGGATCAT 59.234 45.455 0.00 0.00 0.00 2.45
279 280 2.175202 CGGTGGAATTTTTGGGGATCA 58.825 47.619 0.00 0.00 0.00 2.92
280 281 1.134818 GCGGTGGAATTTTTGGGGATC 60.135 52.381 0.00 0.00 0.00 3.36
281 282 0.901827 GCGGTGGAATTTTTGGGGAT 59.098 50.000 0.00 0.00 0.00 3.85
282 283 0.178947 AGCGGTGGAATTTTTGGGGA 60.179 50.000 0.00 0.00 0.00 4.81
283 284 0.684535 AAGCGGTGGAATTTTTGGGG 59.315 50.000 0.00 0.00 0.00 4.96
284 285 3.584834 CTTAAGCGGTGGAATTTTTGGG 58.415 45.455 0.00 0.00 0.00 4.12
285 286 2.993220 GCTTAAGCGGTGGAATTTTTGG 59.007 45.455 12.53 0.00 0.00 3.28
307 308 4.821589 CAAGACTCGGCGGCCTCC 62.822 72.222 18.34 0.01 0.00 4.30
308 309 3.991536 GACAAGACTCGGCGGCCTC 62.992 68.421 18.34 8.10 0.00 4.70
309 310 4.070552 GACAAGACTCGGCGGCCT 62.071 66.667 18.34 0.00 0.00 5.19
311 312 3.665675 ATGGACAAGACTCGGCGGC 62.666 63.158 7.21 0.00 0.00 6.53
312 313 0.174845 TAATGGACAAGACTCGGCGG 59.825 55.000 7.21 0.00 0.00 6.13
313 314 1.560923 CTAATGGACAAGACTCGGCG 58.439 55.000 0.00 0.00 0.00 6.46
314 315 1.291132 GCTAATGGACAAGACTCGGC 58.709 55.000 0.00 0.00 0.00 5.54
315 316 1.802880 CGGCTAATGGACAAGACTCGG 60.803 57.143 0.00 0.00 0.00 4.63
316 317 1.135083 ACGGCTAATGGACAAGACTCG 60.135 52.381 0.00 0.00 0.00 4.18
317 318 2.271800 CACGGCTAATGGACAAGACTC 58.728 52.381 0.00 0.00 0.00 3.36
318 319 1.623811 ACACGGCTAATGGACAAGACT 59.376 47.619 0.00 0.00 0.00 3.24
319 320 1.732259 CACACGGCTAATGGACAAGAC 59.268 52.381 0.00 0.00 0.00 3.01
320 321 1.346395 ACACACGGCTAATGGACAAGA 59.654 47.619 0.00 0.00 0.00 3.02
321 322 1.464608 CACACACGGCTAATGGACAAG 59.535 52.381 0.00 0.00 0.00 3.16
322 323 1.070914 TCACACACGGCTAATGGACAA 59.929 47.619 0.00 0.00 0.00 3.18
323 324 0.682292 TCACACACGGCTAATGGACA 59.318 50.000 0.00 0.00 0.00 4.02
324 325 1.803334 TTCACACACGGCTAATGGAC 58.197 50.000 0.00 0.00 0.00 4.02
325 326 2.355197 CATTCACACACGGCTAATGGA 58.645 47.619 0.00 0.00 0.00 3.41
326 327 1.401552 CCATTCACACACGGCTAATGG 59.598 52.381 0.00 0.00 40.31 3.16
327 328 2.083774 ACCATTCACACACGGCTAATG 58.916 47.619 0.00 0.00 0.00 1.90
328 329 2.083774 CACCATTCACACACGGCTAAT 58.916 47.619 0.00 0.00 0.00 1.73
329 330 1.518325 CACCATTCACACACGGCTAA 58.482 50.000 0.00 0.00 0.00 3.09
330 331 0.953471 GCACCATTCACACACGGCTA 60.953 55.000 0.00 0.00 0.00 3.93
331 332 2.260869 GCACCATTCACACACGGCT 61.261 57.895 0.00 0.00 0.00 5.52
332 333 2.255252 GCACCATTCACACACGGC 59.745 61.111 0.00 0.00 0.00 5.68
333 334 1.243342 ATGGCACCATTCACACACGG 61.243 55.000 0.00 0.00 31.82 4.94
334 335 0.109643 CATGGCACCATTCACACACG 60.110 55.000 0.00 0.00 33.90 4.49
335 336 0.244450 CCATGGCACCATTCACACAC 59.756 55.000 0.00 0.00 33.90 3.82
336 337 0.112025 TCCATGGCACCATTCACACA 59.888 50.000 6.96 0.00 33.90 3.72
337 338 1.135527 CATCCATGGCACCATTCACAC 59.864 52.381 6.96 0.00 33.90 3.82
338 339 1.005687 TCATCCATGGCACCATTCACA 59.994 47.619 6.96 0.00 33.90 3.58
339 340 1.679680 CTCATCCATGGCACCATTCAC 59.320 52.381 6.96 0.00 33.90 3.18
340 341 1.565288 TCTCATCCATGGCACCATTCA 59.435 47.619 6.96 0.00 33.90 2.57
341 342 2.353357 TCTCATCCATGGCACCATTC 57.647 50.000 6.96 0.00 33.90 2.67
342 343 2.832643 TTCTCATCCATGGCACCATT 57.167 45.000 6.96 0.00 33.90 3.16
343 344 2.176148 TCATTCTCATCCATGGCACCAT 59.824 45.455 6.96 0.00 37.08 3.55
344 345 1.565288 TCATTCTCATCCATGGCACCA 59.435 47.619 6.96 0.00 0.00 4.17
345 346 2.353357 TCATTCTCATCCATGGCACC 57.647 50.000 6.96 0.00 0.00 5.01
346 347 4.082081 TGTTTTCATTCTCATCCATGGCAC 60.082 41.667 6.96 0.00 0.00 5.01
347 348 4.087907 TGTTTTCATTCTCATCCATGGCA 58.912 39.130 6.96 0.00 0.00 4.92
348 349 4.724074 TGTTTTCATTCTCATCCATGGC 57.276 40.909 6.96 0.00 0.00 4.40
349 350 6.046593 CCATTGTTTTCATTCTCATCCATGG 58.953 40.000 4.97 4.97 0.00 3.66
350 351 6.046593 CCCATTGTTTTCATTCTCATCCATG 58.953 40.000 0.00 0.00 0.00 3.66
351 352 5.395990 GCCCATTGTTTTCATTCTCATCCAT 60.396 40.000 0.00 0.00 0.00 3.41
352 353 4.081531 GCCCATTGTTTTCATTCTCATCCA 60.082 41.667 0.00 0.00 0.00 3.41
353 354 4.436332 GCCCATTGTTTTCATTCTCATCC 58.564 43.478 0.00 0.00 0.00 3.51
354 355 4.081531 TGGCCCATTGTTTTCATTCTCATC 60.082 41.667 0.00 0.00 0.00 2.92
355 356 3.839490 TGGCCCATTGTTTTCATTCTCAT 59.161 39.130 0.00 0.00 0.00 2.90
356 357 3.237746 TGGCCCATTGTTTTCATTCTCA 58.762 40.909 0.00 0.00 0.00 3.27
357 358 3.959535 TGGCCCATTGTTTTCATTCTC 57.040 42.857 0.00 0.00 0.00 2.87
358 359 4.286549 TCATTGGCCCATTGTTTTCATTCT 59.713 37.500 0.00 0.00 0.00 2.40
359 360 4.577875 TCATTGGCCCATTGTTTTCATTC 58.422 39.130 0.00 0.00 0.00 2.67
360 361 4.637387 TCATTGGCCCATTGTTTTCATT 57.363 36.364 0.00 0.00 0.00 2.57
361 362 4.519213 CATCATTGGCCCATTGTTTTCAT 58.481 39.130 0.00 0.00 0.00 2.57
362 363 3.307550 CCATCATTGGCCCATTGTTTTCA 60.308 43.478 0.00 0.00 35.85 2.69
363 364 3.272581 CCATCATTGGCCCATTGTTTTC 58.727 45.455 0.00 0.00 35.85 2.29
364 365 3.353370 CCATCATTGGCCCATTGTTTT 57.647 42.857 0.00 0.00 35.85 2.43
376 377 1.100510 CCACTCCAGTGCCATCATTG 58.899 55.000 0.76 0.00 44.34 2.82
377 378 0.994247 TCCACTCCAGTGCCATCATT 59.006 50.000 0.76 0.00 44.34 2.57
378 379 0.994247 TTCCACTCCAGTGCCATCAT 59.006 50.000 0.76 0.00 44.34 2.45
379 380 0.325933 CTTCCACTCCAGTGCCATCA 59.674 55.000 0.76 0.00 44.34 3.07
380 381 1.028868 GCTTCCACTCCAGTGCCATC 61.029 60.000 0.76 0.00 44.34 3.51
381 382 1.001641 GCTTCCACTCCAGTGCCAT 60.002 57.895 0.76 0.00 44.34 4.40
382 383 1.993701 TTGCTTCCACTCCAGTGCCA 61.994 55.000 0.76 0.00 44.34 4.92
383 384 0.823356 TTTGCTTCCACTCCAGTGCC 60.823 55.000 0.76 0.00 44.34 5.01
384 385 0.312102 GTTTGCTTCCACTCCAGTGC 59.688 55.000 0.76 0.00 44.34 4.40
385 386 0.588252 CGTTTGCTTCCACTCCAGTG 59.412 55.000 0.00 0.00 45.23 3.66
386 387 0.468226 TCGTTTGCTTCCACTCCAGT 59.532 50.000 0.00 0.00 0.00 4.00
387 388 1.466167 CATCGTTTGCTTCCACTCCAG 59.534 52.381 0.00 0.00 0.00 3.86
388 389 1.071542 TCATCGTTTGCTTCCACTCCA 59.928 47.619 0.00 0.00 0.00 3.86
389 390 1.464997 GTCATCGTTTGCTTCCACTCC 59.535 52.381 0.00 0.00 0.00 3.85
390 391 1.126846 CGTCATCGTTTGCTTCCACTC 59.873 52.381 0.00 0.00 0.00 3.51
391 392 1.148310 CGTCATCGTTTGCTTCCACT 58.852 50.000 0.00 0.00 0.00 4.00
392 393 1.144969 TCGTCATCGTTTGCTTCCAC 58.855 50.000 0.00 0.00 38.33 4.02
393 394 1.798223 CTTCGTCATCGTTTGCTTCCA 59.202 47.619 0.00 0.00 38.33 3.53
394 395 2.066262 TCTTCGTCATCGTTTGCTTCC 58.934 47.619 0.00 0.00 38.33 3.46
395 396 2.987149 TCTCTTCGTCATCGTTTGCTTC 59.013 45.455 0.00 0.00 38.33 3.86
396 397 3.026630 TCTCTTCGTCATCGTTTGCTT 57.973 42.857 0.00 0.00 38.33 3.91
397 398 2.724977 TCTCTTCGTCATCGTTTGCT 57.275 45.000 0.00 0.00 38.33 3.91
398 399 3.788434 TTTCTCTTCGTCATCGTTTGC 57.212 42.857 0.00 0.00 38.33 3.68
399 400 5.515548 TGATTTCTCTTCGTCATCGTTTG 57.484 39.130 0.00 0.00 38.33 2.93
400 401 5.389935 GCTTGATTTCTCTTCGTCATCGTTT 60.390 40.000 0.00 0.00 38.33 3.60
401 402 4.092091 GCTTGATTTCTCTTCGTCATCGTT 59.908 41.667 0.00 0.00 38.33 3.85
402 403 3.614616 GCTTGATTTCTCTTCGTCATCGT 59.385 43.478 0.00 0.00 38.33 3.73
403 404 3.301451 CGCTTGATTTCTCTTCGTCATCG 60.301 47.826 0.00 0.00 38.55 3.84
404 405 3.859961 TCGCTTGATTTCTCTTCGTCATC 59.140 43.478 0.00 0.00 0.00 2.92
405 406 3.849911 TCGCTTGATTTCTCTTCGTCAT 58.150 40.909 0.00 0.00 0.00 3.06
406 407 3.297830 TCGCTTGATTTCTCTTCGTCA 57.702 42.857 0.00 0.00 0.00 4.35
407 408 3.000724 CCATCGCTTGATTTCTCTTCGTC 59.999 47.826 0.00 0.00 0.00 4.20
408 409 2.932614 CCATCGCTTGATTTCTCTTCGT 59.067 45.455 0.00 0.00 0.00 3.85
409 410 3.190079 TCCATCGCTTGATTTCTCTTCG 58.810 45.455 0.00 0.00 0.00 3.79
410 411 3.559242 CCTCCATCGCTTGATTTCTCTTC 59.441 47.826 0.00 0.00 0.00 2.87
411 412 3.539604 CCTCCATCGCTTGATTTCTCTT 58.460 45.455 0.00 0.00 0.00 2.85
412 413 2.744494 GCCTCCATCGCTTGATTTCTCT 60.744 50.000 0.00 0.00 0.00 3.10
413 414 1.601430 GCCTCCATCGCTTGATTTCTC 59.399 52.381 0.00 0.00 0.00 2.87
414 415 1.065199 TGCCTCCATCGCTTGATTTCT 60.065 47.619 0.00 0.00 0.00 2.52
415 416 1.382522 TGCCTCCATCGCTTGATTTC 58.617 50.000 0.00 0.00 0.00 2.17
416 417 1.838112 TTGCCTCCATCGCTTGATTT 58.162 45.000 0.00 0.00 0.00 2.17
417 418 1.679680 CATTGCCTCCATCGCTTGATT 59.320 47.619 0.00 0.00 0.00 2.57
418 419 1.134007 TCATTGCCTCCATCGCTTGAT 60.134 47.619 0.00 0.00 0.00 2.57
419 420 0.252761 TCATTGCCTCCATCGCTTGA 59.747 50.000 0.00 0.00 0.00 3.02
420 421 1.315690 ATCATTGCCTCCATCGCTTG 58.684 50.000 0.00 0.00 0.00 4.01
421 422 2.936919 TATCATTGCCTCCATCGCTT 57.063 45.000 0.00 0.00 0.00 4.68
422 423 3.430042 AATATCATTGCCTCCATCGCT 57.570 42.857 0.00 0.00 0.00 4.93
423 424 3.503363 TCAAATATCATTGCCTCCATCGC 59.497 43.478 0.00 0.00 0.00 4.58
424 425 4.999311 TCTCAAATATCATTGCCTCCATCG 59.001 41.667 0.00 0.00 0.00 3.84
425 426 6.002704 ACTCTCAAATATCATTGCCTCCATC 58.997 40.000 0.00 0.00 0.00 3.51
426 427 5.768662 CACTCTCAAATATCATTGCCTCCAT 59.231 40.000 0.00 0.00 0.00 3.41
427 428 5.128205 CACTCTCAAATATCATTGCCTCCA 58.872 41.667 0.00 0.00 0.00 3.86
428 429 4.023365 GCACTCTCAAATATCATTGCCTCC 60.023 45.833 0.00 0.00 0.00 4.30
429 430 4.820716 AGCACTCTCAAATATCATTGCCTC 59.179 41.667 0.00 0.00 0.00 4.70
430 431 4.789807 AGCACTCTCAAATATCATTGCCT 58.210 39.130 0.00 0.00 0.00 4.75
431 432 6.206243 ACATAGCACTCTCAAATATCATTGCC 59.794 38.462 0.00 0.00 0.00 4.52
432 433 7.199541 ACATAGCACTCTCAAATATCATTGC 57.800 36.000 0.00 0.00 0.00 3.56
442 443 9.591792 GCATATATGAATACATAGCACTCTCAA 57.408 33.333 17.10 0.00 41.44 3.02
443 444 8.752187 TGCATATATGAATACATAGCACTCTCA 58.248 33.333 17.10 0.00 41.44 3.27
444 445 9.029243 GTGCATATATGAATACATAGCACTCTC 57.971 37.037 17.10 0.00 45.08 3.20
445 446 8.939201 GTGCATATATGAATACATAGCACTCT 57.061 34.615 17.10 0.00 45.08 3.24
459 460 9.838975 CAACTACAAACAAAAGTGCATATATGA 57.161 29.630 17.10 0.00 0.00 2.15
460 461 9.624697 ACAACTACAAACAAAAGTGCATATATG 57.375 29.630 8.45 8.45 0.00 1.78
461 462 9.624697 CACAACTACAAACAAAAGTGCATATAT 57.375 29.630 0.00 0.00 0.00 0.86
462 463 8.841300 TCACAACTACAAACAAAAGTGCATATA 58.159 29.630 0.00 0.00 0.00 0.86
463 464 7.711846 TCACAACTACAAACAAAAGTGCATAT 58.288 30.769 0.00 0.00 0.00 1.78
464 465 7.089770 TCACAACTACAAACAAAAGTGCATA 57.910 32.000 0.00 0.00 0.00 3.14
465 466 5.960113 TCACAACTACAAACAAAAGTGCAT 58.040 33.333 0.00 0.00 0.00 3.96
466 467 5.378292 TCACAACTACAAACAAAAGTGCA 57.622 34.783 0.00 0.00 0.00 4.57
467 468 5.276348 GCATCACAACTACAAACAAAAGTGC 60.276 40.000 0.00 0.00 0.00 4.40
468 469 5.804473 TGCATCACAACTACAAACAAAAGTG 59.196 36.000 0.00 0.00 0.00 3.16
469 470 5.960113 TGCATCACAACTACAAACAAAAGT 58.040 33.333 0.00 0.00 0.00 2.66
470 471 6.035843 ACTGCATCACAACTACAAACAAAAG 58.964 36.000 0.00 0.00 0.00 2.27
471 472 5.960113 ACTGCATCACAACTACAAACAAAA 58.040 33.333 0.00 0.00 0.00 2.44
472 473 5.574891 ACTGCATCACAACTACAAACAAA 57.425 34.783 0.00 0.00 0.00 2.83
473 474 6.667370 CATACTGCATCACAACTACAAACAA 58.333 36.000 0.00 0.00 0.00 2.83
474 475 5.334802 GCATACTGCATCACAACTACAAACA 60.335 40.000 0.00 0.00 44.26 2.83
475 476 5.088739 GCATACTGCATCACAACTACAAAC 58.911 41.667 0.00 0.00 44.26 2.93
476 477 5.295431 GCATACTGCATCACAACTACAAA 57.705 39.130 0.00 0.00 44.26 2.83
477 478 4.944962 GCATACTGCATCACAACTACAA 57.055 40.909 0.00 0.00 44.26 2.41
493 494 6.701400 ACTTCAAATTCAAACCACAAGCATAC 59.299 34.615 0.00 0.00 0.00 2.39
494 495 6.815089 ACTTCAAATTCAAACCACAAGCATA 58.185 32.000 0.00 0.00 0.00 3.14
501 502 8.755018 CACTAATCAACTTCAAATTCAAACCAC 58.245 33.333 0.00 0.00 0.00 4.16
514 515 9.950680 TCAAGTTCAAATTCACTAATCAACTTC 57.049 29.630 0.00 0.00 31.94 3.01
516 517 9.956720 CTTCAAGTTCAAATTCACTAATCAACT 57.043 29.630 0.00 0.00 0.00 3.16
517 518 9.736023 ACTTCAAGTTCAAATTCACTAATCAAC 57.264 29.630 0.00 0.00 0.00 3.18
519 520 9.734620 CAACTTCAAGTTCAAATTCACTAATCA 57.265 29.630 0.00 0.00 36.03 2.57
520 521 9.950680 TCAACTTCAAGTTCAAATTCACTAATC 57.049 29.630 0.00 0.00 36.03 1.75
563 564 9.373603 CATACAATCCATGATCAAACAAAACAT 57.626 29.630 0.00 0.00 0.00 2.71
567 568 6.035217 CGCATACAATCCATGATCAAACAAA 58.965 36.000 0.00 0.00 0.00 2.83
570 571 5.422666 TCGCATACAATCCATGATCAAAC 57.577 39.130 0.00 0.00 0.00 2.93
582 583 7.606349 TCTCTTGCTCTATAATCGCATACAAT 58.394 34.615 0.00 0.00 33.15 2.71
583 584 6.981722 TCTCTTGCTCTATAATCGCATACAA 58.018 36.000 0.00 0.00 33.15 2.41
628 639 6.288294 TCAATAGATGATGTAAAACCGGAGG 58.712 40.000 9.46 0.00 44.51 4.30
630 641 7.279981 CACTTCAATAGATGATGTAAAACCGGA 59.720 37.037 9.46 0.00 42.68 5.14
633 644 7.148086 TGGCACTTCAATAGATGATGTAAAACC 60.148 37.037 0.00 0.00 42.68 3.27
646 657 3.265791 GTGACTCCTGGCACTTCAATAG 58.734 50.000 0.00 0.00 32.44 1.73
651 662 0.247736 ATCGTGACTCCTGGCACTTC 59.752 55.000 0.44 0.00 32.98 3.01
664 675 2.542178 CCTGACGTTTTTGTCATCGTGA 59.458 45.455 0.00 0.00 46.98 4.35
666 677 2.828877 TCCTGACGTTTTTGTCATCGT 58.171 42.857 0.00 0.00 46.98 3.73
669 680 5.299279 ACTTCATTCCTGACGTTTTTGTCAT 59.701 36.000 0.00 0.00 46.98 3.06
671 682 4.970003 CACTTCATTCCTGACGTTTTTGTC 59.030 41.667 0.00 0.00 31.98 3.18
672 683 4.398044 ACACTTCATTCCTGACGTTTTTGT 59.602 37.500 0.00 0.00 31.98 2.83
680 691 3.375299 GCACCATACACTTCATTCCTGAC 59.625 47.826 0.00 0.00 0.00 3.51
682 693 2.684881 GGCACCATACACTTCATTCCTG 59.315 50.000 0.00 0.00 0.00 3.86
683 694 3.004752 GGCACCATACACTTCATTCCT 57.995 47.619 0.00 0.00 0.00 3.36
699 710 0.179468 TCCTGGCGTTATTAGGGCAC 59.821 55.000 0.00 0.00 39.43 5.01
700 711 0.179468 GTCCTGGCGTTATTAGGGCA 59.821 55.000 0.71 0.71 41.65 5.36
701 712 0.468648 AGTCCTGGCGTTATTAGGGC 59.531 55.000 0.00 0.00 36.46 5.19
702 713 1.202651 CCAGTCCTGGCGTTATTAGGG 60.203 57.143 0.00 0.00 44.73 3.53
704 715 2.431057 ACTCCAGTCCTGGCGTTATTAG 59.569 50.000 8.53 1.89 45.55 1.73
706 717 1.066143 CACTCCAGTCCTGGCGTTATT 60.066 52.381 8.53 0.00 45.55 1.40
707 718 0.537188 CACTCCAGTCCTGGCGTTAT 59.463 55.000 8.53 0.00 45.55 1.89
709 720 2.743718 CACTCCAGTCCTGGCGTT 59.256 61.111 8.53 0.00 45.55 4.84
714 725 1.735386 CATGAAGCACTCCAGTCCTG 58.265 55.000 0.00 0.00 0.00 3.86
715 726 0.035630 GCATGAAGCACTCCAGTCCT 60.036 55.000 0.00 0.00 44.79 3.85
716 727 2.475666 GCATGAAGCACTCCAGTCC 58.524 57.895 0.00 0.00 44.79 3.85
731 1581 1.961793 AAGTGTAACACGTGTGGCAT 58.038 45.000 24.16 9.09 41.43 4.40
739 1589 7.792925 TCTGTTCAAATGATAAGTGTAACACG 58.207 34.615 0.00 0.00 41.43 4.49
773 1623 8.103305 TCCTTGTTACTTCTCTGCTGAAAATAT 58.897 33.333 0.00 0.00 0.00 1.28
794 1644 9.284968 TCTCCTGTAGTTATTTTTCTTTCCTTG 57.715 33.333 0.00 0.00 0.00 3.61
808 1662 8.582437 TCTTTTCTTTCGAATCTCCTGTAGTTA 58.418 33.333 0.00 0.00 0.00 2.24
810 1664 6.994221 TCTTTTCTTTCGAATCTCCTGTAGT 58.006 36.000 0.00 0.00 0.00 2.73
826 1680 7.660030 TTTTCTTCCTGTGGATTCTTTTCTT 57.340 32.000 0.00 0.00 0.00 2.52
827 1681 7.660030 TTTTTCTTCCTGTGGATTCTTTTCT 57.340 32.000 0.00 0.00 0.00 2.52
950 1805 2.680312 TAGACTACACGTAGCTCCGT 57.320 50.000 0.00 0.00 42.87 4.69
951 1806 4.272991 AGAAATAGACTACACGTAGCTCCG 59.727 45.833 0.00 0.00 36.66 4.63
953 1808 6.200808 GGAAGAAATAGACTACACGTAGCTC 58.799 44.000 4.10 2.31 36.66 4.09
954 1809 5.220815 CGGAAGAAATAGACTACACGTAGCT 60.221 44.000 4.10 0.00 36.66 3.32
955 1810 4.968788 CGGAAGAAATAGACTACACGTAGC 59.031 45.833 4.10 0.00 36.66 3.58
956 1811 5.964168 CACGGAAGAAATAGACTACACGTAG 59.036 44.000 2.63 2.63 39.04 3.51
957 1812 5.674569 GCACGGAAGAAATAGACTACACGTA 60.675 44.000 0.00 0.00 0.00 3.57
958 1813 4.730657 CACGGAAGAAATAGACTACACGT 58.269 43.478 0.00 0.00 0.00 4.49
959 1814 3.546670 GCACGGAAGAAATAGACTACACG 59.453 47.826 0.00 0.00 0.00 4.49
960 1815 4.491676 TGCACGGAAGAAATAGACTACAC 58.508 43.478 0.00 0.00 0.00 2.90
961 1816 4.794278 TGCACGGAAGAAATAGACTACA 57.206 40.909 0.00 0.00 0.00 2.74
962 1817 5.593010 AGATGCACGGAAGAAATAGACTAC 58.407 41.667 0.00 0.00 0.00 2.73
963 1818 5.359860 TGAGATGCACGGAAGAAATAGACTA 59.640 40.000 0.00 0.00 0.00 2.59
964 1819 4.160439 TGAGATGCACGGAAGAAATAGACT 59.840 41.667 0.00 0.00 0.00 3.24
965 1820 4.433615 TGAGATGCACGGAAGAAATAGAC 58.566 43.478 0.00 0.00 0.00 2.59
966 1821 4.402474 TCTGAGATGCACGGAAGAAATAGA 59.598 41.667 0.00 0.00 0.00 1.98
1064 1931 3.691744 GAGGGACGACGAGCAGCAG 62.692 68.421 0.00 0.00 0.00 4.24
1065 1932 3.749064 GAGGGACGACGAGCAGCA 61.749 66.667 0.00 0.00 0.00 4.41
1066 1933 4.500116 GGAGGGACGACGAGCAGC 62.500 72.222 0.00 0.00 0.00 5.25
1067 1934 3.827898 GGGAGGGACGACGAGCAG 61.828 72.222 0.00 0.00 0.00 4.24
1191 2058 4.175787 AGTAAGTAAGTTGCTCGGACTG 57.824 45.455 0.00 0.00 0.00 3.51
1232 2099 2.031163 GACAGCAGGCCAACGACT 59.969 61.111 5.01 0.00 0.00 4.18
1300 2167 1.094785 CCAAATTCGGACGAGCCAAT 58.905 50.000 0.00 0.00 35.94 3.16
1304 2171 1.090052 CCTCCCAAATTCGGACGAGC 61.090 60.000 0.00 0.00 0.00 5.03
1325 2192 0.175073 ATTACCCGAGAACGCACTCC 59.825 55.000 4.31 0.00 38.29 3.85
1420 2287 0.977627 ATGATCAGTGGCAGTCCGGA 60.978 55.000 0.00 0.00 34.14 5.14
1452 2324 2.214181 CTCGTTCCCTCTGGACCGTG 62.214 65.000 0.00 0.00 45.86 4.94
1522 2394 9.784531 ATTATCCATCTTAAACATACAGAGGTG 57.215 33.333 0.00 0.00 0.00 4.00
1706 2614 0.109597 CCTGCAATCTGTTTGACCGC 60.110 55.000 2.74 0.00 37.53 5.68
1757 2665 4.019919 CTGAATGCCAGGTAAATTGACG 57.980 45.455 0.00 0.00 39.23 4.35
1851 3104 1.557099 AGTATGACAAGGCGAGGTCA 58.443 50.000 10.45 10.45 46.92 4.02
1926 3179 1.825622 GCAGCAGCTTGATACCCCC 60.826 63.158 0.00 0.00 37.91 5.40
1967 3220 0.033796 CACCTCCTACCGTCCTACCA 60.034 60.000 0.00 0.00 0.00 3.25
1968 3221 0.033699 ACACCTCCTACCGTCCTACC 60.034 60.000 0.00 0.00 0.00 3.18
1969 3222 1.844687 AACACCTCCTACCGTCCTAC 58.155 55.000 0.00 0.00 0.00 3.18
1970 3223 2.357154 GGTAACACCTCCTACCGTCCTA 60.357 54.545 0.00 0.00 34.73 2.94
1971 3224 1.618074 GGTAACACCTCCTACCGTCCT 60.618 57.143 0.00 0.00 34.73 3.85
1972 3225 0.820226 GGTAACACCTCCTACCGTCC 59.180 60.000 0.00 0.00 34.73 4.79
1973 3226 1.549203 TGGTAACACCTCCTACCGTC 58.451 55.000 0.00 0.00 46.17 4.79
1974 3227 3.772096 TGGTAACACCTCCTACCGT 57.228 52.632 0.00 0.00 46.17 4.83
2010 3263 1.783284 GGCAAAAACAAGCTAGTGCC 58.217 50.000 1.46 1.46 44.23 5.01
2014 3267 5.296531 ACAAAATTGGGCAAAAACAAGCTAG 59.703 36.000 0.00 0.00 0.00 3.42
2120 3373 3.565482 TGTCATGACAAGCAGAAACCTTC 59.435 43.478 26.02 0.00 38.56 3.46
2176 3429 0.468226 TACAGCCCATTGGATCGACC 59.532 55.000 3.62 0.00 39.54 4.79
2315 3571 9.435688 TCAATATGAAACTGGATATATGGAACG 57.564 33.333 0.00 0.00 0.00 3.95
2373 3629 4.060205 GGCCAGTAAGAAAGAAACGTGTA 58.940 43.478 0.00 0.00 0.00 2.90
2376 3632 3.487120 AGGCCAGTAAGAAAGAAACGT 57.513 42.857 5.01 0.00 0.00 3.99
2426 3686 2.356330 CCCATAAAAACCGTGGCCTCTA 60.356 50.000 3.32 0.00 0.00 2.43
2428 3688 0.815095 CCCATAAAAACCGTGGCCTC 59.185 55.000 3.32 0.00 0.00 4.70
2445 3705 7.277981 CGTCAGGTATGCTAACATTAATATCCC 59.722 40.741 0.00 0.00 37.74 3.85
2499 3759 8.110860 ACGTTTCCTATCTGTCATTCAAAAAT 57.889 30.769 0.00 0.00 0.00 1.82
2557 3817 5.929697 TGTGCTTCAGTTACAGAAATCAG 57.070 39.130 0.00 0.00 0.00 2.90
2662 3922 7.544566 TGCTACTTGTAGCTAAATATTATCGCC 59.455 37.037 26.50 0.84 43.20 5.54
2705 3966 4.744795 TCTGGATTAGTTCTCAGCCTTC 57.255 45.455 0.00 0.00 0.00 3.46
2743 4005 7.568199 TTATAATCAAGGAACCTTAGCAAGC 57.432 36.000 5.75 0.00 34.50 4.01
2744 4006 9.125026 ACATTATAATCAAGGAACCTTAGCAAG 57.875 33.333 5.75 0.00 34.50 4.01
2745 4007 9.474313 AACATTATAATCAAGGAACCTTAGCAA 57.526 29.630 5.75 0.00 34.50 3.91
2746 4008 9.474313 AAACATTATAATCAAGGAACCTTAGCA 57.526 29.630 5.75 0.00 34.50 3.49
2784 4046 7.122715 AGCTGGTGTATTTTGAAATGGGTATA 58.877 34.615 0.00 0.00 0.00 1.47
2788 4050 4.806640 AGCTGGTGTATTTTGAAATGGG 57.193 40.909 0.00 0.00 0.00 4.00
2789 4051 9.868277 TTAAATAGCTGGTGTATTTTGAAATGG 57.132 29.630 0.00 0.00 33.23 3.16
2836 4106 6.017934 TGTTGACTATTTGCAGTTTGACTCTC 60.018 38.462 0.00 0.00 0.00 3.20
2885 4155 9.691362 GCAATAGAGTTTGAGATAAACCAAAAA 57.309 29.630 0.00 0.00 34.52 1.94
2984 4255 4.219033 CGACATGGTGCTAAAAACAGAAC 58.781 43.478 0.00 0.00 0.00 3.01
2987 4258 2.095263 CCCGACATGGTGCTAAAAACAG 60.095 50.000 0.00 0.00 35.15 3.16
3018 4289 0.966875 CTTGCCCAGCAGCATTGGTA 60.967 55.000 0.00 0.00 43.64 3.25
3019 4290 2.203669 TTGCCCAGCAGCATTGGT 60.204 55.556 0.00 0.00 43.64 3.67
3036 4307 9.927081 ATAGGTTCAGAATTTCCAACATTATCT 57.073 29.630 9.76 2.58 0.00 1.98
3090 4361 0.037326 TAACCTGTTGCTGAGCCGAG 60.037 55.000 0.23 0.00 0.00 4.63
3114 4385 9.213777 ACCATATAATCTTCAGAACTAGTCCAA 57.786 33.333 0.00 0.00 0.00 3.53
3115 4386 8.783660 ACCATATAATCTTCAGAACTAGTCCA 57.216 34.615 0.00 0.00 0.00 4.02
3151 4422 7.334421 GCTCAGTTAACCAGAATACAAGATTGA 59.666 37.037 0.88 0.00 0.00 2.57
3152 4423 7.119699 TGCTCAGTTAACCAGAATACAAGATTG 59.880 37.037 0.88 0.00 0.00 2.67
3154 4425 6.711277 TGCTCAGTTAACCAGAATACAAGAT 58.289 36.000 0.88 0.00 0.00 2.40
3172 4445 4.518211 AGATCAACCTTCTTTGTTGCTCAG 59.482 41.667 8.95 0.00 39.88 3.35
3192 4465 6.563037 ATTGATCATGCCAGCTATAGAGAT 57.437 37.500 3.21 0.00 0.00 2.75
3240 4513 2.177394 TGTTCCTGCGCATAACAGAA 57.823 45.000 25.85 15.37 37.32 3.02
3262 4535 6.830873 ATCCTCCAAACTTCTTCTTGATTG 57.169 37.500 0.00 0.00 0.00 2.67
3285 4558 4.443913 GCGGTGGCTTTTTAGGAATTAA 57.556 40.909 0.00 0.00 35.83 1.40
3331 4604 8.230472 ACTGTTCAATTTTGGGATGAGATATC 57.770 34.615 0.00 0.00 0.00 1.63
3424 4697 0.670162 CAAAATAGGCCCGCTCATGG 59.330 55.000 0.00 0.00 0.00 3.66
3477 4750 5.967088 TGACTGAAGCTACAGAAGGATAAC 58.033 41.667 0.00 0.00 40.63 1.89
3499 4772 6.142139 TCAAGCACTGAACAAACGAATATTG 58.858 36.000 0.00 0.00 0.00 1.90
3500 4773 6.017109 ACTCAAGCACTGAACAAACGAATATT 60.017 34.615 0.00 0.00 32.17 1.28
3503 4776 3.627577 ACTCAAGCACTGAACAAACGAAT 59.372 39.130 0.00 0.00 32.17 3.34
3536 4810 4.142924 GCAAAGCAAAATATCCCCAAAACG 60.143 41.667 0.00 0.00 0.00 3.60
3542 4816 3.448660 AGACTGCAAAGCAAAATATCCCC 59.551 43.478 0.00 0.00 38.41 4.81
3582 4857 1.574702 CGAGCGGTCCTTTGGGTTTC 61.575 60.000 9.39 0.00 0.00 2.78
3693 4976 8.883731 CAGAACTCAAGAGAACTGAACTTTTTA 58.116 33.333 16.52 0.00 37.33 1.52
3709 4992 2.224606 TGCAGGCTTTCAGAACTCAAG 58.775 47.619 0.00 0.00 0.00 3.02
3722 5005 3.681593 TGCACATTTATTTTGCAGGCT 57.318 38.095 0.00 0.00 41.29 4.58
3863 5148 8.114290 TCATTACGCATTAAAAAGACGAGATTC 58.886 33.333 0.00 0.00 0.00 2.52
3870 5155 5.511729 GCAGGTCATTACGCATTAAAAAGAC 59.488 40.000 0.00 0.00 0.00 3.01
3877 5162 3.493699 GGTAGGCAGGTCATTACGCATTA 60.494 47.826 0.00 0.00 0.00 1.90
3880 5165 0.177141 GGTAGGCAGGTCATTACGCA 59.823 55.000 0.00 0.00 0.00 5.24
3882 5167 2.684001 TTGGTAGGCAGGTCATTACG 57.316 50.000 0.00 0.00 0.00 3.18
3893 5178 0.753111 CAAGGGGCTGATTGGTAGGC 60.753 60.000 0.00 0.00 39.76 3.93
3904 5189 0.689745 TCCAGCGTATACAAGGGGCT 60.690 55.000 3.32 0.00 0.00 5.19
3906 5191 2.104111 TCATTCCAGCGTATACAAGGGG 59.896 50.000 3.32 0.00 0.00 4.79
4016 5301 2.023414 TTCGCACCGACAACAGGAGT 62.023 55.000 0.00 0.00 34.89 3.85
4020 5305 2.954753 GCCTTCGCACCGACAACAG 61.955 63.158 0.00 0.00 34.89 3.16
4038 5323 0.794981 CTTCTTCAGACGACGAGGCG 60.795 60.000 0.00 0.00 37.29 5.52
4135 5420 0.449388 CAGCCGCAGTCCTTGAAATC 59.551 55.000 0.00 0.00 0.00 2.17
4165 5450 2.939103 GCAAGGTAGCTGTTCGATGAAT 59.061 45.455 0.00 0.00 0.00 2.57
4197 5482 7.490657 TGGTCCAGTCTATAACAGTAACATT 57.509 36.000 0.00 0.00 0.00 2.71
4198 5483 7.676683 ATGGTCCAGTCTATAACAGTAACAT 57.323 36.000 0.00 0.00 0.00 2.71
4199 5484 7.038587 ACAATGGTCCAGTCTATAACAGTAACA 60.039 37.037 0.00 0.00 0.00 2.41
4200 5485 7.328737 ACAATGGTCCAGTCTATAACAGTAAC 58.671 38.462 0.00 0.00 0.00 2.50
4201 5486 7.490657 ACAATGGTCCAGTCTATAACAGTAA 57.509 36.000 0.00 0.00 0.00 2.24
4202 5487 7.108841 GACAATGGTCCAGTCTATAACAGTA 57.891 40.000 0.00 0.00 38.12 2.74
4203 5488 5.978814 GACAATGGTCCAGTCTATAACAGT 58.021 41.667 0.00 0.00 38.12 3.55
4250 5535 3.256631 GCTCATCACTGGGTGTTCAAAAT 59.743 43.478 0.00 0.00 34.79 1.82
4260 5545 2.025155 AGTAGTACGCTCATCACTGGG 58.975 52.381 0.00 0.00 0.00 4.45
4269 5554 5.742926 GTCAGAATGGTTAAGTAGTACGCTC 59.257 44.000 0.00 0.00 36.16 5.03
4281 5566 5.013079 ACAACTCAGGATGTCAGAATGGTTA 59.987 40.000 0.00 0.00 37.40 2.85
4282 5567 4.202503 ACAACTCAGGATGTCAGAATGGTT 60.203 41.667 0.00 0.00 37.40 3.67
4294 5581 0.326264 GGCCAGACACAACTCAGGAT 59.674 55.000 0.00 0.00 0.00 3.24
4296 5583 0.109342 AAGGCCAGACACAACTCAGG 59.891 55.000 5.01 0.00 0.00 3.86
4305 5592 1.883638 GCACATTCAGAAGGCCAGACA 60.884 52.381 5.01 0.00 0.00 3.41
4308 5595 0.957395 ACGCACATTCAGAAGGCCAG 60.957 55.000 5.01 0.00 0.00 4.85
4309 5596 0.955428 GACGCACATTCAGAAGGCCA 60.955 55.000 5.01 0.00 0.00 5.36
4310 5597 1.796796 GACGCACATTCAGAAGGCC 59.203 57.895 0.00 0.00 0.00 5.19
4311 5598 1.421485 CGACGCACATTCAGAAGGC 59.579 57.895 0.00 0.00 0.00 4.35
4312 5599 1.291184 TGCGACGCACATTCAGAAGG 61.291 55.000 20.50 0.00 31.71 3.46
4359 5663 4.080863 CCTCCCTCTGTGCTTTTGTAGTAT 60.081 45.833 0.00 0.00 0.00 2.12
4360 5664 3.260884 CCTCCCTCTGTGCTTTTGTAGTA 59.739 47.826 0.00 0.00 0.00 1.82
4361 5665 2.039084 CCTCCCTCTGTGCTTTTGTAGT 59.961 50.000 0.00 0.00 0.00 2.73
4362 5666 2.616510 CCCTCCCTCTGTGCTTTTGTAG 60.617 54.545 0.00 0.00 0.00 2.74
4387 5696 1.686110 CCCCGCTTCTGTACCTCCT 60.686 63.158 0.00 0.00 0.00 3.69
4397 5706 3.119602 GGTTTAGAATGTTTCCCCGCTTC 60.120 47.826 0.00 0.00 0.00 3.86
4401 5710 2.676342 CTCGGTTTAGAATGTTTCCCCG 59.324 50.000 0.00 0.00 35.63 5.73
4419 5728 1.470494 TCAGCACTCTTGTCTAGCTCG 59.530 52.381 0.00 0.00 32.35 5.03
4496 5805 3.005367 ACAACTTTAGGAAACAATGCCCG 59.995 43.478 0.00 0.00 0.00 6.13
4497 5806 4.038642 TCACAACTTTAGGAAACAATGCCC 59.961 41.667 0.00 0.00 0.00 5.36
4537 5846 9.330063 CCAAGATCTTTGACAATATTAGCACTA 57.670 33.333 4.86 0.00 0.00 2.74
4617 5926 3.321968 ACCTTTGGAAAGCCATTCTTCAC 59.678 43.478 0.00 0.00 45.46 3.18
4645 5954 4.901868 AGAGTATTTTACAGGCCGTTTCA 58.098 39.130 5.57 0.00 0.00 2.69
4665 5974 6.261435 TCCCTCCACAAAGACTTATAAGAGA 58.739 40.000 19.38 2.37 0.00 3.10
4666 5975 6.155393 ACTCCCTCCACAAAGACTTATAAGAG 59.845 42.308 19.38 2.91 0.00 2.85
4668 5977 6.301169 ACTCCCTCCACAAAGACTTATAAG 57.699 41.667 11.05 11.05 0.00 1.73
4669 5978 7.622081 TGATACTCCCTCCACAAAGACTTATAA 59.378 37.037 0.00 0.00 0.00 0.98
4681 5990 8.753497 AATTTCTTAAATGATACTCCCTCCAC 57.247 34.615 0.00 0.00 0.00 4.02
4724 6125 1.614903 TGACAGAAAAATGCTGCCAGG 59.385 47.619 0.00 0.00 36.86 4.45
4728 6129 5.107220 CCTTTTCATGACAGAAAAATGCTGC 60.107 40.000 0.00 0.00 44.27 5.25
4729 6130 6.218019 TCCTTTTCATGACAGAAAAATGCTG 58.782 36.000 0.00 0.00 44.27 4.41
4730 6131 6.409524 TCCTTTTCATGACAGAAAAATGCT 57.590 33.333 0.00 0.00 44.27 3.79
4731 6132 6.091713 CCATCCTTTTCATGACAGAAAAATGC 59.908 38.462 0.00 0.00 44.27 3.56
4732 6133 7.156673 ACCATCCTTTTCATGACAGAAAAATG 58.843 34.615 0.00 11.89 44.27 2.32
4733 6134 7.234166 AGACCATCCTTTTCATGACAGAAAAAT 59.766 33.333 0.00 4.28 44.27 1.82
4742 6143 3.588842 ACCAGAGACCATCCTTTTCATGA 59.411 43.478 0.00 0.00 0.00 3.07
4760 6163 1.482593 ACCATCGCCTTAGAAGACCAG 59.517 52.381 0.00 0.00 0.00 4.00
4804 6209 4.389077 ACTTCAGATAAACTTAGCACGTGC 59.611 41.667 32.79 32.79 42.49 5.34
5041 6618 3.727726 TGTCAAGTCATCTTCTTTGCGA 58.272 40.909 0.00 0.00 0.00 5.10
5042 6619 4.214437 GTTGTCAAGTCATCTTCTTTGCG 58.786 43.478 0.00 0.00 0.00 4.85
5043 6620 4.972440 GTGTTGTCAAGTCATCTTCTTTGC 59.028 41.667 0.00 0.00 0.00 3.68
5044 6621 5.066375 TGGTGTTGTCAAGTCATCTTCTTTG 59.934 40.000 0.00 0.00 0.00 2.77
5047 6624 4.384056 CTGGTGTTGTCAAGTCATCTTCT 58.616 43.478 0.00 0.00 0.00 2.85
5048 6625 3.499918 CCTGGTGTTGTCAAGTCATCTTC 59.500 47.826 0.00 0.00 0.00 2.87
5070 6659 2.022129 CAGGCGTGTCGTTCTGGTC 61.022 63.158 0.00 0.00 31.19 4.02
5125 6716 1.475403 AGGACGTGATCAAGATCGGT 58.525 50.000 15.90 6.04 40.63 4.69
5140 6732 1.617357 ACGTACTGGAACTGGAAGGAC 59.383 52.381 0.00 0.00 39.30 3.85
5185 6777 1.672030 CAGAATGTGGTGGCGCTCA 60.672 57.895 7.64 0.00 0.00 4.26
5188 6780 4.465512 CGCAGAATGTGGTGGCGC 62.466 66.667 0.00 0.00 44.40 6.53
5220 6812 3.945981 GGCATACCCCTTTTCGAAAAA 57.054 42.857 22.67 9.34 0.00 1.94
5238 6830 0.959553 CATCATTCAGATGCAGGGGC 59.040 55.000 0.00 0.00 46.90 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.