Multiple sequence alignment - TraesCS3D01G172100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G172100 chr3D 100.000 2930 0 0 1 2930 152703419 152700490 0.000000e+00 5411.0
1 TraesCS3D01G172100 chr3D 94.515 948 49 2 801 1745 152852228 152851281 0.000000e+00 1459.0
2 TraesCS3D01G172100 chr3D 87.514 913 89 7 895 1786 149770057 149769149 0.000000e+00 1031.0
3 TraesCS3D01G172100 chr3D 89.552 536 26 10 1620 2151 152851331 152850822 0.000000e+00 652.0
4 TraesCS3D01G172100 chr3D 96.618 207 6 1 525 730 528821064 528820858 2.800000e-90 342.0
5 TraesCS3D01G172100 chr3D 77.951 449 47 27 1620 2052 149769234 149768822 1.760000e-57 233.0
6 TraesCS3D01G172100 chr3D 93.750 64 4 0 2241 2304 149548603 149548666 2.400000e-16 97.1
7 TraesCS3D01G172100 chr3D 100.000 28 0 0 2313 2340 149548649 149548676 5.000000e-03 52.8
8 TraesCS3D01G172100 chr3A 93.271 1070 37 11 1620 2676 177888739 177889786 0.000000e+00 1544.0
9 TraesCS3D01G172100 chr3A 93.689 919 48 4 827 1742 177671314 177672225 0.000000e+00 1367.0
10 TraesCS3D01G172100 chr3A 94.173 738 34 3 1008 1742 177888055 177888786 0.000000e+00 1116.0
11 TraesCS3D01G172100 chr3A 89.486 856 59 16 892 1727 159831899 159832743 0.000000e+00 1053.0
12 TraesCS3D01G172100 chr3A 87.671 584 47 9 749 1332 177647056 177647614 0.000000e+00 656.0
13 TraesCS3D01G172100 chr3A 91.116 439 25 6 1620 2058 177672178 177672602 1.510000e-162 582.0
14 TraesCS3D01G172100 chr3A 98.477 197 2 1 2734 2930 177889793 177889988 2.160000e-91 346.0
15 TraesCS3D01G172100 chr3A 75.368 475 43 31 1620 2050 181105597 181106041 8.400000e-36 161.0
16 TraesCS3D01G172100 chr3A 93.750 64 4 0 2241 2304 166928186 166928249 2.400000e-16 97.1
17 TraesCS3D01G172100 chr3A 93.617 47 1 2 2107 2151 177672706 177672752 5.240000e-08 69.4
18 TraesCS3D01G172100 chr3A 100.000 28 0 0 2313 2340 166928232 166928259 5.000000e-03 52.8
19 TraesCS3D01G172100 chr3B 94.559 919 32 7 1479 2391 223558272 223557366 0.000000e+00 1404.0
20 TraesCS3D01G172100 chr3B 91.498 988 60 5 758 1742 224287112 224286146 0.000000e+00 1338.0
21 TraesCS3D01G172100 chr3B 92.381 945 55 4 801 1742 224164592 224163662 0.000000e+00 1330.0
22 TraesCS3D01G172100 chr3B 90.681 998 74 9 754 1742 223678148 223677161 0.000000e+00 1310.0
23 TraesCS3D01G172100 chr3B 87.670 884 84 8 864 1727 203345609 203346487 0.000000e+00 1005.0
24 TraesCS3D01G172100 chr3B 93.607 657 37 4 819 1473 223558893 223558240 0.000000e+00 976.0
25 TraesCS3D01G172100 chr3B 93.246 533 25 4 1620 2151 224286193 224285671 0.000000e+00 774.0
26 TraesCS3D01G172100 chr3B 88.743 533 25 8 1620 2151 223677208 223676710 1.150000e-173 619.0
27 TraesCS3D01G172100 chr3B 89.494 514 19 8 1639 2151 224163690 224163211 4.150000e-173 617.0
28 TraesCS3D01G172100 chr3B 93.916 263 5 3 2677 2930 223557116 223556856 1.270000e-103 387.0
29 TraesCS3D01G172100 chr3B 97.309 223 3 1 2454 2676 223557368 223557149 2.760000e-100 375.0
30 TraesCS3D01G172100 chr6A 87.300 811 70 15 936 1730 146441660 146440867 0.000000e+00 896.0
31 TraesCS3D01G172100 chr5D 97.196 535 3 3 1 523 125658213 125657679 0.000000e+00 894.0
32 TraesCS3D01G172100 chr5D 97.170 530 9 2 1 524 489755804 489755275 0.000000e+00 891.0
33 TraesCS3D01G172100 chr5D 96.565 524 14 2 1 523 525156068 525155548 0.000000e+00 865.0
34 TraesCS3D01G172100 chr5D 95.094 530 19 3 1 523 284885409 284884880 0.000000e+00 828.0
35 TraesCS3D01G172100 chr5D 93.818 550 7 6 1 523 78755115 78754566 0.000000e+00 802.0
36 TraesCS3D01G172100 chr2D 96.981 530 10 2 1 524 102620307 102619778 0.000000e+00 885.0
37 TraesCS3D01G172100 chr2A 95.463 529 18 3 1 523 139971696 139972224 0.000000e+00 839.0
38 TraesCS3D01G172100 chr1D 93.807 549 9 3 1 524 481961095 481961643 0.000000e+00 802.0
39 TraesCS3D01G172100 chr6D 85.688 538 58 15 2 523 100211930 100212464 1.530000e-152 549.0
40 TraesCS3D01G172100 chr1B 84.299 535 62 15 2 523 61450280 61450805 1.210000e-138 503.0
41 TraesCS3D01G172100 chr1B 91.827 208 13 4 526 730 118428975 118429181 1.330000e-73 287.0
42 TraesCS3D01G172100 chr1B 91.388 209 14 4 526 731 118130216 118130423 1.720000e-72 283.0
43 TraesCS3D01G172100 chr5A 91.500 200 13 4 526 722 398787011 398786813 3.720000e-69 272.0
44 TraesCS3D01G172100 chr5B 89.529 191 17 3 526 714 626264586 626264775 3.770000e-59 239.0
45 TraesCS3D01G172100 chr4A 88.947 190 18 3 526 714 645211694 645211507 6.310000e-57 231.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G172100 chr3D 152700490 152703419 2929 True 5411.0 5411 100.000000 1 2930 1 chr3D.!!$R1 2929
1 TraesCS3D01G172100 chr3D 152850822 152852228 1406 True 1055.5 1459 92.033500 801 2151 2 chr3D.!!$R4 1350
2 TraesCS3D01G172100 chr3D 149768822 149770057 1235 True 632.0 1031 82.732500 895 2052 2 chr3D.!!$R3 1157
3 TraesCS3D01G172100 chr3A 159831899 159832743 844 False 1053.0 1053 89.486000 892 1727 1 chr3A.!!$F1 835
4 TraesCS3D01G172100 chr3A 177888055 177889988 1933 False 1002.0 1544 95.307000 1008 2930 3 chr3A.!!$F6 1922
5 TraesCS3D01G172100 chr3A 177671314 177672752 1438 False 672.8 1367 92.807333 827 2151 3 chr3A.!!$F5 1324
6 TraesCS3D01G172100 chr3A 177647056 177647614 558 False 656.0 656 87.671000 749 1332 1 chr3A.!!$F2 583
7 TraesCS3D01G172100 chr3B 224285671 224287112 1441 True 1056.0 1338 92.372000 758 2151 2 chr3B.!!$R4 1393
8 TraesCS3D01G172100 chr3B 203345609 203346487 878 False 1005.0 1005 87.670000 864 1727 1 chr3B.!!$F1 863
9 TraesCS3D01G172100 chr3B 224163211 224164592 1381 True 973.5 1330 90.937500 801 2151 2 chr3B.!!$R3 1350
10 TraesCS3D01G172100 chr3B 223676710 223678148 1438 True 964.5 1310 89.712000 754 2151 2 chr3B.!!$R2 1397
11 TraesCS3D01G172100 chr3B 223556856 223558893 2037 True 785.5 1404 94.847750 819 2930 4 chr3B.!!$R1 2111
12 TraesCS3D01G172100 chr6A 146440867 146441660 793 True 896.0 896 87.300000 936 1730 1 chr6A.!!$R1 794
13 TraesCS3D01G172100 chr5D 125657679 125658213 534 True 894.0 894 97.196000 1 523 1 chr5D.!!$R2 522
14 TraesCS3D01G172100 chr5D 489755275 489755804 529 True 891.0 891 97.170000 1 524 1 chr5D.!!$R4 523
15 TraesCS3D01G172100 chr5D 525155548 525156068 520 True 865.0 865 96.565000 1 523 1 chr5D.!!$R5 522
16 TraesCS3D01G172100 chr5D 284884880 284885409 529 True 828.0 828 95.094000 1 523 1 chr5D.!!$R3 522
17 TraesCS3D01G172100 chr5D 78754566 78755115 549 True 802.0 802 93.818000 1 523 1 chr5D.!!$R1 522
18 TraesCS3D01G172100 chr2D 102619778 102620307 529 True 885.0 885 96.981000 1 524 1 chr2D.!!$R1 523
19 TraesCS3D01G172100 chr2A 139971696 139972224 528 False 839.0 839 95.463000 1 523 1 chr2A.!!$F1 522
20 TraesCS3D01G172100 chr1D 481961095 481961643 548 False 802.0 802 93.807000 1 524 1 chr1D.!!$F1 523
21 TraesCS3D01G172100 chr6D 100211930 100212464 534 False 549.0 549 85.688000 2 523 1 chr6D.!!$F1 521
22 TraesCS3D01G172100 chr1B 61450280 61450805 525 False 503.0 503 84.299000 2 523 1 chr1B.!!$F1 521

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 312 0.035739 GGGGCTCTGTTTTGTACCGA 59.964 55.0 0.0 0.0 0.0 4.69 F
459 469 0.038618 GTGGTGGATTTTTGGGACGC 60.039 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1659 1915 0.446616 GGCTTGTAAGTAACTGCGGC 59.553 55.0 0.0 0.0 31.88 6.53 R
2404 3046 0.305922 GATGCAGATACAACAGCCGC 59.694 55.0 0.0 0.0 0.00 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
256 266 2.420022 GAGTGAGAGTGAGAGAGTGAGC 59.580 54.545 0.00 0.00 0.00 4.26
257 267 1.130373 GTGAGAGTGAGAGAGTGAGCG 59.870 57.143 0.00 0.00 0.00 5.03
258 268 1.002544 TGAGAGTGAGAGAGTGAGCGA 59.997 52.381 0.00 0.00 0.00 4.93
259 269 1.665679 GAGAGTGAGAGAGTGAGCGAG 59.334 57.143 0.00 0.00 0.00 5.03
260 270 1.003118 AGAGTGAGAGAGTGAGCGAGT 59.997 52.381 0.00 0.00 0.00 4.18
261 271 1.130373 GAGTGAGAGAGTGAGCGAGTG 59.870 57.143 0.00 0.00 0.00 3.51
262 272 0.170116 GTGAGAGAGTGAGCGAGTGG 59.830 60.000 0.00 0.00 0.00 4.00
263 273 0.036875 TGAGAGAGTGAGCGAGTGGA 59.963 55.000 0.00 0.00 0.00 4.02
264 274 0.732571 GAGAGAGTGAGCGAGTGGAG 59.267 60.000 0.00 0.00 0.00 3.86
265 275 0.037590 AGAGAGTGAGCGAGTGGAGT 59.962 55.000 0.00 0.00 0.00 3.85
266 276 0.170116 GAGAGTGAGCGAGTGGAGTG 59.830 60.000 0.00 0.00 0.00 3.51
267 277 0.538516 AGAGTGAGCGAGTGGAGTGT 60.539 55.000 0.00 0.00 0.00 3.55
268 278 0.387878 GAGTGAGCGAGTGGAGTGTG 60.388 60.000 0.00 0.00 0.00 3.82
269 279 0.823769 AGTGAGCGAGTGGAGTGTGA 60.824 55.000 0.00 0.00 0.00 3.58
270 280 0.387878 GTGAGCGAGTGGAGTGTGAG 60.388 60.000 0.00 0.00 0.00 3.51
271 281 1.445238 GAGCGAGTGGAGTGTGAGC 60.445 63.158 0.00 0.00 0.00 4.26
272 282 2.807045 GCGAGTGGAGTGTGAGCG 60.807 66.667 0.00 0.00 0.00 5.03
273 283 2.954611 CGAGTGGAGTGTGAGCGA 59.045 61.111 0.00 0.00 0.00 4.93
274 284 1.442857 CGAGTGGAGTGTGAGCGAC 60.443 63.158 0.00 0.00 0.00 5.19
275 285 1.442857 GAGTGGAGTGTGAGCGACG 60.443 63.158 0.00 0.00 0.00 5.12
276 286 2.430921 GTGGAGTGTGAGCGACGG 60.431 66.667 0.00 0.00 0.00 4.79
277 287 3.680786 TGGAGTGTGAGCGACGGG 61.681 66.667 0.00 0.00 0.00 5.28
278 288 4.436998 GGAGTGTGAGCGACGGGG 62.437 72.222 0.00 0.00 0.00 5.73
279 289 3.371063 GAGTGTGAGCGACGGGGA 61.371 66.667 0.00 0.00 0.00 4.81
280 290 3.343788 GAGTGTGAGCGACGGGGAG 62.344 68.421 0.00 0.00 0.00 4.30
281 291 3.681835 GTGTGAGCGACGGGGAGT 61.682 66.667 0.00 0.00 0.00 3.85
282 292 3.680786 TGTGAGCGACGGGGAGTG 61.681 66.667 0.00 0.00 0.00 3.51
283 293 4.436998 GTGAGCGACGGGGAGTGG 62.437 72.222 0.00 0.00 0.00 4.00
293 303 2.936032 GGGAGTGGGGGCTCTGTT 60.936 66.667 0.00 0.00 35.89 3.16
294 304 2.539081 GGGAGTGGGGGCTCTGTTT 61.539 63.158 0.00 0.00 35.89 2.83
295 305 1.460699 GGAGTGGGGGCTCTGTTTT 59.539 57.895 0.00 0.00 35.89 2.43
296 306 0.895559 GGAGTGGGGGCTCTGTTTTG 60.896 60.000 0.00 0.00 35.89 2.44
297 307 0.178990 GAGTGGGGGCTCTGTTTTGT 60.179 55.000 0.00 0.00 32.99 2.83
298 308 1.073284 GAGTGGGGGCTCTGTTTTGTA 59.927 52.381 0.00 0.00 32.99 2.41
299 309 1.202891 AGTGGGGGCTCTGTTTTGTAC 60.203 52.381 0.00 0.00 0.00 2.90
300 310 0.111639 TGGGGGCTCTGTTTTGTACC 59.888 55.000 0.00 0.00 0.00 3.34
301 311 0.958876 GGGGGCTCTGTTTTGTACCG 60.959 60.000 0.00 0.00 0.00 4.02
302 312 0.035739 GGGGCTCTGTTTTGTACCGA 59.964 55.000 0.00 0.00 0.00 4.69
303 313 1.154197 GGGCTCTGTTTTGTACCGAC 58.846 55.000 0.00 0.00 0.00 4.79
304 314 1.541670 GGGCTCTGTTTTGTACCGACA 60.542 52.381 0.00 0.00 0.00 4.35
305 315 1.798813 GGCTCTGTTTTGTACCGACAG 59.201 52.381 11.88 11.88 41.57 3.51
306 316 1.194772 GCTCTGTTTTGTACCGACAGC 59.805 52.381 12.82 3.44 40.36 4.40
307 317 1.798813 CTCTGTTTTGTACCGACAGCC 59.201 52.381 12.82 0.00 40.36 4.85
308 318 0.872388 CTGTTTTGTACCGACAGCCC 59.128 55.000 7.24 0.00 36.76 5.19
309 319 0.470766 TGTTTTGTACCGACAGCCCT 59.529 50.000 0.00 0.00 36.76 5.19
310 320 1.693062 TGTTTTGTACCGACAGCCCTA 59.307 47.619 0.00 0.00 36.76 3.53
311 321 2.104451 TGTTTTGTACCGACAGCCCTAA 59.896 45.455 0.00 0.00 36.76 2.69
312 322 2.460757 TTTGTACCGACAGCCCTAAC 57.539 50.000 0.00 0.00 36.76 2.34
313 323 0.244450 TTGTACCGACAGCCCTAACG 59.756 55.000 0.00 0.00 36.76 3.18
323 333 2.435410 CCCTAACGGCCGTCAACC 60.435 66.667 34.29 0.00 0.00 3.77
324 334 2.435410 CCTAACGGCCGTCAACCC 60.435 66.667 34.29 0.00 0.00 4.11
325 335 2.344500 CTAACGGCCGTCAACCCA 59.656 61.111 34.29 11.59 0.00 4.51
326 336 2.030862 TAACGGCCGTCAACCCAC 59.969 61.111 34.29 0.00 0.00 4.61
327 337 2.444700 CTAACGGCCGTCAACCCACT 62.445 60.000 34.29 16.21 0.00 4.00
328 338 2.042404 TAACGGCCGTCAACCCACTT 62.042 55.000 34.29 15.38 0.00 3.16
329 339 3.353836 CGGCCGTCAACCCACTTG 61.354 66.667 19.50 0.00 0.00 3.16
330 340 3.670377 GGCCGTCAACCCACTTGC 61.670 66.667 0.00 0.00 0.00 4.01
331 341 3.670377 GCCGTCAACCCACTTGCC 61.670 66.667 0.00 0.00 0.00 4.52
332 342 3.353836 CCGTCAACCCACTTGCCG 61.354 66.667 0.00 0.00 30.89 5.69
333 343 2.590575 CGTCAACCCACTTGCCGT 60.591 61.111 0.00 0.00 0.00 5.68
334 344 2.604174 CGTCAACCCACTTGCCGTC 61.604 63.158 0.00 0.00 0.00 4.79
335 345 1.227853 GTCAACCCACTTGCCGTCT 60.228 57.895 0.00 0.00 0.00 4.18
336 346 1.227823 TCAACCCACTTGCCGTCTG 60.228 57.895 0.00 0.00 0.00 3.51
337 347 2.113139 AACCCACTTGCCGTCTGG 59.887 61.111 0.00 0.00 38.77 3.86
382 392 2.436109 GGCCAGCCCTGTCAGAAA 59.564 61.111 0.00 0.00 0.00 2.52
383 393 1.000396 GGCCAGCCCTGTCAGAAAT 60.000 57.895 0.00 0.00 0.00 2.17
384 394 1.034292 GGCCAGCCCTGTCAGAAATC 61.034 60.000 0.00 0.00 0.00 2.17
385 395 1.372087 GCCAGCCCTGTCAGAAATCG 61.372 60.000 0.00 0.00 0.00 3.34
386 396 0.745845 CCAGCCCTGTCAGAAATCGG 60.746 60.000 0.00 0.00 0.00 4.18
387 397 0.745845 CAGCCCTGTCAGAAATCGGG 60.746 60.000 0.00 0.00 37.97 5.14
388 398 1.201429 AGCCCTGTCAGAAATCGGGT 61.201 55.000 0.00 0.00 37.24 5.28
389 399 0.322546 GCCCTGTCAGAAATCGGGTT 60.323 55.000 0.00 0.00 37.24 4.11
390 400 1.065709 GCCCTGTCAGAAATCGGGTTA 60.066 52.381 0.00 0.00 37.24 2.85
391 401 2.617021 GCCCTGTCAGAAATCGGGTTAA 60.617 50.000 0.00 0.00 37.24 2.01
392 402 3.007635 CCCTGTCAGAAATCGGGTTAAC 58.992 50.000 0.00 0.00 0.00 2.01
393 403 3.307480 CCCTGTCAGAAATCGGGTTAACT 60.307 47.826 5.42 0.00 0.00 2.24
394 404 3.684788 CCTGTCAGAAATCGGGTTAACTG 59.315 47.826 5.42 0.00 0.00 3.16
395 405 3.071479 TGTCAGAAATCGGGTTAACTGC 58.929 45.455 5.42 0.00 0.00 4.40
396 406 2.093783 GTCAGAAATCGGGTTAACTGCG 59.906 50.000 5.42 0.00 0.00 5.18
397 407 1.396996 CAGAAATCGGGTTAACTGCGG 59.603 52.381 5.42 0.00 0.00 5.69
398 408 0.098200 GAAATCGGGTTAACTGCGGC 59.902 55.000 5.42 0.00 0.00 6.53
399 409 0.606944 AAATCGGGTTAACTGCGGCA 60.607 50.000 1.29 1.29 0.00 5.69
400 410 0.606944 AATCGGGTTAACTGCGGCAA 60.607 50.000 3.44 0.00 0.00 4.52
401 411 0.606944 ATCGGGTTAACTGCGGCAAA 60.607 50.000 3.44 0.00 0.00 3.68
402 412 1.081708 CGGGTTAACTGCGGCAAAC 60.082 57.895 3.44 5.79 0.00 2.93
403 413 1.287815 GGGTTAACTGCGGCAAACC 59.712 57.895 21.36 21.36 40.56 3.27
414 424 3.978460 GGCAAACCGGTCATTTGTT 57.022 47.368 8.04 0.00 38.93 2.83
415 425 2.232756 GGCAAACCGGTCATTTGTTT 57.767 45.000 8.04 0.00 38.93 2.83
416 426 2.556257 GGCAAACCGGTCATTTGTTTT 58.444 42.857 8.04 0.00 38.93 2.43
417 427 2.939756 GGCAAACCGGTCATTTGTTTTT 59.060 40.909 8.04 0.00 38.93 1.94
418 428 4.120589 GGCAAACCGGTCATTTGTTTTTA 58.879 39.130 8.04 0.00 38.93 1.52
419 429 4.752604 GGCAAACCGGTCATTTGTTTTTAT 59.247 37.500 8.04 0.00 38.93 1.40
420 430 5.237561 GGCAAACCGGTCATTTGTTTTTATT 59.762 36.000 8.04 0.00 38.93 1.40
421 431 6.132724 GCAAACCGGTCATTTGTTTTTATTG 58.867 36.000 8.04 4.87 38.93 1.90
422 432 6.018669 GCAAACCGGTCATTTGTTTTTATTGA 60.019 34.615 8.04 0.00 38.93 2.57
423 433 7.563270 CAAACCGGTCATTTGTTTTTATTGAG 58.437 34.615 8.04 0.00 33.27 3.02
424 434 6.642707 ACCGGTCATTTGTTTTTATTGAGA 57.357 33.333 0.00 0.00 0.00 3.27
425 435 7.045126 ACCGGTCATTTGTTTTTATTGAGAA 57.955 32.000 0.00 0.00 0.00 2.87
426 436 7.493367 ACCGGTCATTTGTTTTTATTGAGAAA 58.507 30.769 0.00 0.00 0.00 2.52
427 437 7.982354 ACCGGTCATTTGTTTTTATTGAGAAAA 59.018 29.630 0.00 0.00 0.00 2.29
428 438 8.987890 CCGGTCATTTGTTTTTATTGAGAAAAT 58.012 29.630 0.00 0.00 0.00 1.82
445 455 9.796120 TTGAGAAAATTTACAAGTAAAGTGGTG 57.204 29.630 10.70 0.00 38.30 4.17
446 456 8.410141 TGAGAAAATTTACAAGTAAAGTGGTGG 58.590 33.333 10.70 0.00 38.30 4.61
447 457 8.528044 AGAAAATTTACAAGTAAAGTGGTGGA 57.472 30.769 10.70 0.00 38.30 4.02
448 458 9.143155 AGAAAATTTACAAGTAAAGTGGTGGAT 57.857 29.630 10.70 0.00 38.30 3.41
449 459 9.758651 GAAAATTTACAAGTAAAGTGGTGGATT 57.241 29.630 10.70 0.00 38.30 3.01
453 463 8.934507 TTTACAAGTAAAGTGGTGGATTTTTG 57.065 30.769 1.46 0.00 31.95 2.44
454 464 5.912892 ACAAGTAAAGTGGTGGATTTTTGG 58.087 37.500 0.00 0.00 0.00 3.28
455 465 5.163353 ACAAGTAAAGTGGTGGATTTTTGGG 60.163 40.000 0.00 0.00 0.00 4.12
456 466 4.810345 AGTAAAGTGGTGGATTTTTGGGA 58.190 39.130 0.00 0.00 0.00 4.37
457 467 4.587262 AGTAAAGTGGTGGATTTTTGGGAC 59.413 41.667 0.00 0.00 0.00 4.46
458 468 1.616159 AGTGGTGGATTTTTGGGACG 58.384 50.000 0.00 0.00 0.00 4.79
459 469 0.038618 GTGGTGGATTTTTGGGACGC 60.039 55.000 0.00 0.00 0.00 5.19
460 470 1.211709 GGTGGATTTTTGGGACGCG 59.788 57.895 3.53 3.53 0.00 6.01
461 471 1.443702 GTGGATTTTTGGGACGCGC 60.444 57.895 5.73 0.00 0.00 6.86
462 472 1.602323 TGGATTTTTGGGACGCGCT 60.602 52.632 5.73 0.00 0.00 5.92
463 473 1.154035 GGATTTTTGGGACGCGCTG 60.154 57.895 5.73 1.02 0.00 5.18
464 474 1.154035 GATTTTTGGGACGCGCTGG 60.154 57.895 5.73 0.00 0.00 4.85
465 475 1.582610 GATTTTTGGGACGCGCTGGA 61.583 55.000 5.73 0.00 0.00 3.86
466 476 1.175983 ATTTTTGGGACGCGCTGGAA 61.176 50.000 5.73 0.00 0.00 3.53
467 477 1.384989 TTTTTGGGACGCGCTGGAAA 61.385 50.000 5.73 0.00 0.00 3.13
468 478 1.175983 TTTTGGGACGCGCTGGAAAT 61.176 50.000 5.73 0.00 0.00 2.17
469 479 1.861542 TTTGGGACGCGCTGGAAATG 61.862 55.000 5.73 0.00 0.00 2.32
470 480 2.746277 GGGACGCGCTGGAAATGT 60.746 61.111 5.73 0.00 0.00 2.71
471 481 2.480555 GGACGCGCTGGAAATGTG 59.519 61.111 5.73 0.00 0.00 3.21
472 482 2.480555 GACGCGCTGGAAATGTGG 59.519 61.111 5.73 0.00 0.00 4.17
473 483 2.281484 ACGCGCTGGAAATGTGGT 60.281 55.556 5.73 0.00 0.00 4.16
474 484 2.176546 CGCGCTGGAAATGTGGTG 59.823 61.111 5.56 0.00 0.00 4.17
475 485 2.568090 GCGCTGGAAATGTGGTGG 59.432 61.111 0.00 0.00 0.00 4.61
476 486 2.568090 CGCTGGAAATGTGGTGGC 59.432 61.111 0.00 0.00 0.00 5.01
477 487 2.267351 CGCTGGAAATGTGGTGGCA 61.267 57.895 0.00 0.00 0.00 4.92
478 488 1.804396 CGCTGGAAATGTGGTGGCAA 61.804 55.000 0.00 0.00 0.00 4.52
479 489 0.609662 GCTGGAAATGTGGTGGCAAT 59.390 50.000 0.00 0.00 0.00 3.56
480 490 1.002315 GCTGGAAATGTGGTGGCAATT 59.998 47.619 0.00 0.00 0.00 2.32
481 491 2.690786 CTGGAAATGTGGTGGCAATTG 58.309 47.619 0.00 0.00 0.00 2.32
482 492 1.347050 TGGAAATGTGGTGGCAATTGG 59.653 47.619 7.72 0.00 0.00 3.16
483 493 1.622811 GGAAATGTGGTGGCAATTGGA 59.377 47.619 7.72 0.00 0.00 3.53
484 494 2.236893 GGAAATGTGGTGGCAATTGGAT 59.763 45.455 7.72 0.00 0.00 3.41
485 495 3.264104 GAAATGTGGTGGCAATTGGATG 58.736 45.455 7.72 0.00 0.00 3.51
486 496 0.538118 ATGTGGTGGCAATTGGATGC 59.462 50.000 7.72 0.00 45.67 3.91
487 497 0.542467 TGTGGTGGCAATTGGATGCT 60.542 50.000 7.72 0.00 45.68 3.79
488 498 0.609662 GTGGTGGCAATTGGATGCTT 59.390 50.000 7.72 0.00 45.68 3.91
489 499 1.002315 GTGGTGGCAATTGGATGCTTT 59.998 47.619 7.72 0.00 45.68 3.51
490 500 2.233431 GTGGTGGCAATTGGATGCTTTA 59.767 45.455 7.72 0.00 45.68 1.85
491 501 2.902486 TGGTGGCAATTGGATGCTTTAA 59.098 40.909 7.72 0.00 45.68 1.52
492 502 3.261580 GGTGGCAATTGGATGCTTTAAC 58.738 45.455 7.72 0.00 45.68 2.01
493 503 3.055891 GGTGGCAATTGGATGCTTTAACT 60.056 43.478 7.72 0.00 45.68 2.24
494 504 4.563374 GGTGGCAATTGGATGCTTTAACTT 60.563 41.667 7.72 0.00 45.68 2.66
495 505 4.627035 GTGGCAATTGGATGCTTTAACTTC 59.373 41.667 7.72 0.00 45.68 3.01
496 506 4.282957 TGGCAATTGGATGCTTTAACTTCA 59.717 37.500 7.72 0.00 45.68 3.02
497 507 5.221601 TGGCAATTGGATGCTTTAACTTCAA 60.222 36.000 7.72 0.00 45.68 2.69
498 508 5.700373 GGCAATTGGATGCTTTAACTTCAAA 59.300 36.000 7.72 0.00 45.68 2.69
499 509 6.372381 GGCAATTGGATGCTTTAACTTCAAAT 59.628 34.615 7.72 0.00 45.68 2.32
500 510 7.238571 GCAATTGGATGCTTTAACTTCAAATG 58.761 34.615 7.72 0.00 43.06 2.32
501 511 7.095102 GCAATTGGATGCTTTAACTTCAAATGT 60.095 33.333 7.72 0.00 43.06 2.71
502 512 7.894376 ATTGGATGCTTTAACTTCAAATGTG 57.106 32.000 0.00 0.00 0.00 3.21
503 513 5.782047 TGGATGCTTTAACTTCAAATGTGG 58.218 37.500 0.00 0.00 0.00 4.17
504 514 5.304101 TGGATGCTTTAACTTCAAATGTGGT 59.696 36.000 0.00 0.00 0.00 4.16
505 515 5.634859 GGATGCTTTAACTTCAAATGTGGTG 59.365 40.000 0.00 0.00 0.00 4.17
506 516 4.942852 TGCTTTAACTTCAAATGTGGTGG 58.057 39.130 0.00 0.00 0.00 4.61
507 517 4.404073 TGCTTTAACTTCAAATGTGGTGGT 59.596 37.500 0.00 0.00 0.00 4.16
508 518 5.105146 TGCTTTAACTTCAAATGTGGTGGTT 60.105 36.000 0.00 0.00 0.00 3.67
509 519 5.815222 GCTTTAACTTCAAATGTGGTGGTTT 59.185 36.000 0.00 0.00 0.00 3.27
510 520 6.315144 GCTTTAACTTCAAATGTGGTGGTTTT 59.685 34.615 0.00 0.00 0.00 2.43
511 521 7.148323 GCTTTAACTTCAAATGTGGTGGTTTTT 60.148 33.333 0.00 0.00 0.00 1.94
512 522 7.602517 TTAACTTCAAATGTGGTGGTTTTTG 57.397 32.000 0.00 0.00 0.00 2.44
513 523 3.938334 ACTTCAAATGTGGTGGTTTTTGC 59.062 39.130 0.00 0.00 0.00 3.68
514 524 3.616956 TCAAATGTGGTGGTTTTTGCA 57.383 38.095 0.00 0.00 0.00 4.08
515 525 3.942829 TCAAATGTGGTGGTTTTTGCAA 58.057 36.364 0.00 0.00 0.00 4.08
516 526 4.521146 TCAAATGTGGTGGTTTTTGCAAT 58.479 34.783 0.00 0.00 0.00 3.56
517 527 4.946157 TCAAATGTGGTGGTTTTTGCAATT 59.054 33.333 0.00 0.00 0.00 2.32
518 528 5.065731 TCAAATGTGGTGGTTTTTGCAATTC 59.934 36.000 0.00 0.00 0.00 2.17
519 529 3.616956 TGTGGTGGTTTTTGCAATTCA 57.383 38.095 0.00 0.00 0.00 2.57
520 530 3.265791 TGTGGTGGTTTTTGCAATTCAC 58.734 40.909 0.00 6.69 0.00 3.18
521 531 3.055530 TGTGGTGGTTTTTGCAATTCACT 60.056 39.130 0.00 0.00 0.00 3.41
522 532 3.555547 GTGGTGGTTTTTGCAATTCACTC 59.444 43.478 0.00 2.67 0.00 3.51
523 533 3.130633 GGTGGTTTTTGCAATTCACTCC 58.869 45.455 0.00 0.00 0.00 3.85
524 534 2.794350 GTGGTTTTTGCAATTCACTCCG 59.206 45.455 0.00 0.00 0.00 4.63
525 535 2.690497 TGGTTTTTGCAATTCACTCCGA 59.310 40.909 0.00 0.00 0.00 4.55
526 536 3.131223 TGGTTTTTGCAATTCACTCCGAA 59.869 39.130 0.00 0.00 38.22 4.30
527 537 4.116238 GGTTTTTGCAATTCACTCCGAAA 58.884 39.130 0.00 0.00 37.12 3.46
528 538 4.568760 GGTTTTTGCAATTCACTCCGAAAA 59.431 37.500 0.00 0.00 37.12 2.29
529 539 5.236263 GGTTTTTGCAATTCACTCCGAAAAT 59.764 36.000 0.00 0.00 37.12 1.82
530 540 6.238347 GGTTTTTGCAATTCACTCCGAAAATT 60.238 34.615 0.00 0.00 37.12 1.82
531 541 7.042389 GGTTTTTGCAATTCACTCCGAAAATTA 60.042 33.333 0.00 0.00 37.12 1.40
532 542 8.331742 GTTTTTGCAATTCACTCCGAAAATTAA 58.668 29.630 0.00 0.00 37.12 1.40
533 543 7.636259 TTTGCAATTCACTCCGAAAATTAAG 57.364 32.000 0.00 0.00 37.12 1.85
534 544 5.708948 TGCAATTCACTCCGAAAATTAAGG 58.291 37.500 0.00 0.00 37.12 2.69
535 545 5.102313 GCAATTCACTCCGAAAATTAAGGG 58.898 41.667 0.00 0.00 37.12 3.95
536 546 5.105917 GCAATTCACTCCGAAAATTAAGGGA 60.106 40.000 0.00 0.00 37.12 4.20
537 547 6.405842 GCAATTCACTCCGAAAATTAAGGGAT 60.406 38.462 0.00 0.00 37.12 3.85
538 548 6.699575 ATTCACTCCGAAAATTAAGGGATG 57.300 37.500 0.00 0.00 37.12 3.51
539 549 3.945285 TCACTCCGAAAATTAAGGGATGC 59.055 43.478 0.00 0.00 0.00 3.91
540 550 3.694072 CACTCCGAAAATTAAGGGATGCA 59.306 43.478 0.00 0.00 0.00 3.96
541 551 3.694566 ACTCCGAAAATTAAGGGATGCAC 59.305 43.478 0.00 0.00 0.00 4.57
542 552 3.020984 TCCGAAAATTAAGGGATGCACC 58.979 45.455 0.00 0.00 38.08 5.01
543 553 3.023832 CCGAAAATTAAGGGATGCACCT 58.976 45.455 0.00 0.00 44.56 4.00
544 554 3.181487 CCGAAAATTAAGGGATGCACCTG 60.181 47.826 0.00 0.00 40.87 4.00
545 555 3.181487 CGAAAATTAAGGGATGCACCTGG 60.181 47.826 0.00 0.00 40.87 4.45
546 556 1.780503 AATTAAGGGATGCACCTGGC 58.219 50.000 0.00 0.00 40.87 4.85
547 557 0.106015 ATTAAGGGATGCACCTGGCC 60.106 55.000 0.00 0.00 40.87 5.36
548 558 2.223464 TTAAGGGATGCACCTGGCCC 62.223 60.000 0.00 0.00 40.87 5.80
559 569 4.278513 CTGGCCCACCCCGTTGAA 62.279 66.667 0.00 0.00 33.59 2.69
560 570 3.801068 CTGGCCCACCCCGTTGAAA 62.801 63.158 0.00 0.00 33.59 2.69
561 571 2.283604 GGCCCACCCCGTTGAAAT 60.284 61.111 0.00 0.00 0.00 2.17
562 572 2.348104 GGCCCACCCCGTTGAAATC 61.348 63.158 0.00 0.00 0.00 2.17
563 573 1.605165 GCCCACCCCGTTGAAATCA 60.605 57.895 0.00 0.00 0.00 2.57
564 574 1.595093 GCCCACCCCGTTGAAATCAG 61.595 60.000 0.00 0.00 0.00 2.90
565 575 0.965363 CCCACCCCGTTGAAATCAGG 60.965 60.000 0.00 0.00 0.00 3.86
566 576 0.965363 CCACCCCGTTGAAATCAGGG 60.965 60.000 5.01 5.01 43.88 4.45
568 578 4.337013 CCCGTTGAAATCAGGGGG 57.663 61.111 11.74 9.21 40.18 5.40
585 595 3.864789 GGGGGCAGAGAGATTTATGAA 57.135 47.619 0.00 0.00 0.00 2.57
586 596 4.170468 GGGGGCAGAGAGATTTATGAAA 57.830 45.455 0.00 0.00 0.00 2.69
587 597 4.140536 GGGGGCAGAGAGATTTATGAAAG 58.859 47.826 0.00 0.00 0.00 2.62
588 598 4.140536 GGGGCAGAGAGATTTATGAAAGG 58.859 47.826 0.00 0.00 0.00 3.11
589 599 3.567585 GGGCAGAGAGATTTATGAAAGGC 59.432 47.826 0.00 0.00 0.00 4.35
590 600 4.202441 GGCAGAGAGATTTATGAAAGGCA 58.798 43.478 0.00 0.00 0.00 4.75
591 601 4.641989 GGCAGAGAGATTTATGAAAGGCAA 59.358 41.667 0.00 0.00 0.00 4.52
592 602 5.301298 GGCAGAGAGATTTATGAAAGGCAAT 59.699 40.000 0.00 0.00 0.00 3.56
593 603 6.207213 GCAGAGAGATTTATGAAAGGCAATG 58.793 40.000 0.00 0.00 0.00 2.82
594 604 6.207213 CAGAGAGATTTATGAAAGGCAATGC 58.793 40.000 0.00 0.00 0.00 3.56
595 605 6.039493 CAGAGAGATTTATGAAAGGCAATGCT 59.961 38.462 4.82 0.00 0.00 3.79
596 606 6.039493 AGAGAGATTTATGAAAGGCAATGCTG 59.961 38.462 4.82 0.00 0.00 4.41
597 607 5.068723 AGAGATTTATGAAAGGCAATGCTGG 59.931 40.000 4.82 0.00 0.00 4.85
598 608 3.891422 TTTATGAAAGGCAATGCTGGG 57.109 42.857 4.82 0.00 0.00 4.45
599 609 1.113788 TATGAAAGGCAATGCTGGGC 58.886 50.000 4.82 0.00 0.00 5.36
606 616 2.284112 CAATGCTGGGCCCCACTT 60.284 61.111 22.27 6.51 0.00 3.16
607 617 2.284112 AATGCTGGGCCCCACTTG 60.284 61.111 22.27 5.35 0.00 3.16
608 618 3.164610 AATGCTGGGCCCCACTTGT 62.165 57.895 22.27 0.00 0.00 3.16
609 619 2.677968 AATGCTGGGCCCCACTTGTT 62.678 55.000 22.27 3.69 0.00 2.83
610 620 2.524148 GCTGGGCCCCACTTGTTT 60.524 61.111 22.27 0.00 0.00 2.83
611 621 1.228737 GCTGGGCCCCACTTGTTTA 60.229 57.895 22.27 0.00 0.00 2.01
612 622 0.830023 GCTGGGCCCCACTTGTTTAA 60.830 55.000 22.27 0.00 0.00 1.52
613 623 1.937191 CTGGGCCCCACTTGTTTAAT 58.063 50.000 22.27 0.00 0.00 1.40
614 624 2.256306 CTGGGCCCCACTTGTTTAATT 58.744 47.619 22.27 0.00 0.00 1.40
615 625 2.637382 CTGGGCCCCACTTGTTTAATTT 59.363 45.455 22.27 0.00 0.00 1.82
616 626 3.835395 CTGGGCCCCACTTGTTTAATTTA 59.165 43.478 22.27 0.00 0.00 1.40
617 627 4.430441 TGGGCCCCACTTGTTTAATTTAT 58.570 39.130 22.27 0.00 0.00 1.40
618 628 4.846940 TGGGCCCCACTTGTTTAATTTATT 59.153 37.500 22.27 0.00 0.00 1.40
619 629 5.182487 GGGCCCCACTTGTTTAATTTATTG 58.818 41.667 12.23 0.00 0.00 1.90
620 630 4.634004 GGCCCCACTTGTTTAATTTATTGC 59.366 41.667 0.00 0.00 0.00 3.56
621 631 4.328712 GCCCCACTTGTTTAATTTATTGCG 59.671 41.667 0.00 0.00 0.00 4.85
622 632 4.867608 CCCCACTTGTTTAATTTATTGCGG 59.132 41.667 0.00 0.00 0.00 5.69
623 633 4.328712 CCCACTTGTTTAATTTATTGCGGC 59.671 41.667 0.00 0.00 0.00 6.53
624 634 4.926238 CCACTTGTTTAATTTATTGCGGCA 59.074 37.500 0.00 0.00 0.00 5.69
625 635 5.062058 CCACTTGTTTAATTTATTGCGGCAG 59.938 40.000 1.67 0.00 0.00 4.85
626 636 5.861251 CACTTGTTTAATTTATTGCGGCAGA 59.139 36.000 1.67 0.00 0.00 4.26
627 637 6.033831 CACTTGTTTAATTTATTGCGGCAGAG 59.966 38.462 1.67 0.00 0.00 3.35
628 638 5.888691 TGTTTAATTTATTGCGGCAGAGA 57.111 34.783 1.67 0.00 0.00 3.10
629 639 6.449635 TGTTTAATTTATTGCGGCAGAGAT 57.550 33.333 1.67 0.00 0.00 2.75
630 640 6.862209 TGTTTAATTTATTGCGGCAGAGATT 58.138 32.000 1.67 5.50 0.00 2.40
631 641 7.319646 TGTTTAATTTATTGCGGCAGAGATTT 58.680 30.769 1.67 0.00 0.00 2.17
632 642 8.462811 TGTTTAATTTATTGCGGCAGAGATTTA 58.537 29.630 1.67 0.00 0.00 1.40
633 643 9.463443 GTTTAATTTATTGCGGCAGAGATTTAT 57.537 29.630 1.67 0.00 0.00 1.40
634 644 9.462174 TTTAATTTATTGCGGCAGAGATTTATG 57.538 29.630 1.67 0.00 0.00 1.90
635 645 5.437289 TTTATTGCGGCAGAGATTTATGG 57.563 39.130 1.67 0.00 0.00 2.74
636 646 2.708216 TTGCGGCAGAGATTTATGGA 57.292 45.000 1.67 0.00 0.00 3.41
637 647 2.708216 TGCGGCAGAGATTTATGGAA 57.292 45.000 0.00 0.00 0.00 3.53
638 648 2.564771 TGCGGCAGAGATTTATGGAAG 58.435 47.619 0.00 0.00 0.00 3.46
639 649 2.170397 TGCGGCAGAGATTTATGGAAGA 59.830 45.455 0.00 0.00 0.00 2.87
640 650 3.206150 GCGGCAGAGATTTATGGAAGAA 58.794 45.455 0.00 0.00 0.00 2.52
641 651 3.627577 GCGGCAGAGATTTATGGAAGAAA 59.372 43.478 0.00 0.00 0.00 2.52
642 652 4.096382 GCGGCAGAGATTTATGGAAGAAAA 59.904 41.667 0.00 0.00 0.00 2.29
643 653 5.393027 GCGGCAGAGATTTATGGAAGAAAAA 60.393 40.000 0.00 0.00 0.00 1.94
684 694 9.676129 ATTAATAGAATTAACTGGAGGAGAGGA 57.324 33.333 0.00 0.00 0.00 3.71
685 695 9.676129 TTAATAGAATTAACTGGAGGAGAGGAT 57.324 33.333 0.00 0.00 0.00 3.24
687 697 9.851267 AATAGAATTAACTGGAGGAGAGGATAT 57.149 33.333 0.00 0.00 0.00 1.63
688 698 7.552050 AGAATTAACTGGAGGAGAGGATATG 57.448 40.000 0.00 0.00 0.00 1.78
689 699 6.500049 AGAATTAACTGGAGGAGAGGATATGG 59.500 42.308 0.00 0.00 0.00 2.74
690 700 5.418692 TTAACTGGAGGAGAGGATATGGA 57.581 43.478 0.00 0.00 0.00 3.41
691 701 4.500389 AACTGGAGGAGAGGATATGGAT 57.500 45.455 0.00 0.00 0.00 3.41
692 702 4.059773 ACTGGAGGAGAGGATATGGATC 57.940 50.000 0.00 0.00 0.00 3.36
693 703 3.023119 CTGGAGGAGAGGATATGGATCG 58.977 54.545 0.00 0.00 32.28 3.69
694 704 2.649816 TGGAGGAGAGGATATGGATCGA 59.350 50.000 0.00 0.00 32.28 3.59
695 705 3.287222 GGAGGAGAGGATATGGATCGAG 58.713 54.545 0.00 0.00 32.28 4.04
696 706 2.687935 GAGGAGAGGATATGGATCGAGC 59.312 54.545 0.00 0.00 32.28 5.03
697 707 1.403679 GGAGAGGATATGGATCGAGCG 59.596 57.143 0.00 0.00 32.28 5.03
698 708 2.088423 GAGAGGATATGGATCGAGCGT 58.912 52.381 0.00 0.00 32.28 5.07
699 709 2.490115 GAGAGGATATGGATCGAGCGTT 59.510 50.000 0.00 0.00 32.28 4.84
700 710 2.230025 AGAGGATATGGATCGAGCGTTG 59.770 50.000 0.00 0.00 32.28 4.10
701 711 1.071605 GGATATGGATCGAGCGTTGC 58.928 55.000 0.00 0.00 32.28 4.17
702 712 1.605457 GGATATGGATCGAGCGTTGCA 60.605 52.381 0.00 0.00 32.28 4.08
703 713 2.135139 GATATGGATCGAGCGTTGCAA 58.865 47.619 0.00 0.00 0.00 4.08
704 714 1.286501 TATGGATCGAGCGTTGCAAC 58.713 50.000 19.89 19.89 0.00 4.17
714 724 4.811761 GTTGCAACGATCGCCCGC 62.812 66.667 16.60 15.58 0.00 6.13
717 727 4.096558 GCAACGATCGCCCGCAAA 62.097 61.111 16.60 0.00 0.00 3.68
718 728 2.098298 CAACGATCGCCCGCAAAG 59.902 61.111 16.60 0.00 0.00 2.77
719 729 3.124921 AACGATCGCCCGCAAAGG 61.125 61.111 16.60 0.00 40.63 3.11
720 730 3.599285 AACGATCGCCCGCAAAGGA 62.599 57.895 16.60 0.00 45.00 3.36
721 731 3.264897 CGATCGCCCGCAAAGGAG 61.265 66.667 0.26 0.00 45.00 3.69
722 732 3.577313 GATCGCCCGCAAAGGAGC 61.577 66.667 0.00 0.00 45.00 4.70
739 749 3.974585 GAGCGTTCTCCTTTAGAAACG 57.025 47.619 2.39 2.39 45.78 3.60
740 750 2.666994 GAGCGTTCTCCTTTAGAAACGG 59.333 50.000 8.34 0.00 45.78 4.44
741 751 2.298163 AGCGTTCTCCTTTAGAAACGGA 59.702 45.455 8.34 0.00 45.78 4.69
742 752 2.666994 GCGTTCTCCTTTAGAAACGGAG 59.333 50.000 8.34 5.97 45.78 4.63
743 753 3.251571 CGTTCTCCTTTAGAAACGGAGG 58.748 50.000 11.09 0.00 45.78 4.30
744 754 3.597255 GTTCTCCTTTAGAAACGGAGGG 58.403 50.000 11.09 0.00 45.78 4.30
745 755 3.179902 TCTCCTTTAGAAACGGAGGGA 57.820 47.619 11.09 0.00 43.54 4.20
746 756 3.097614 TCTCCTTTAGAAACGGAGGGAG 58.902 50.000 11.09 0.00 43.54 4.30
747 757 2.832733 CTCCTTTAGAAACGGAGGGAGT 59.167 50.000 4.66 0.00 40.47 3.85
748 758 4.021916 CTCCTTTAGAAACGGAGGGAGTA 58.978 47.826 4.66 0.00 40.47 2.59
749 759 4.021916 TCCTTTAGAAACGGAGGGAGTAG 58.978 47.826 0.00 0.00 0.00 2.57
750 760 4.021916 CCTTTAGAAACGGAGGGAGTAGA 58.978 47.826 0.00 0.00 0.00 2.59
751 761 4.650131 CCTTTAGAAACGGAGGGAGTAGAT 59.350 45.833 0.00 0.00 0.00 1.98
752 762 5.128991 CCTTTAGAAACGGAGGGAGTAGATT 59.871 44.000 0.00 0.00 0.00 2.40
796 806 1.680338 AAAAAGAGAGCGCCAAGTGT 58.320 45.000 2.29 0.00 0.00 3.55
797 807 1.680338 AAAAGAGAGCGCCAAGTGTT 58.320 45.000 2.29 0.00 0.00 3.32
798 808 0.947244 AAAGAGAGCGCCAAGTGTTG 59.053 50.000 2.29 0.00 0.00 3.33
799 809 0.179045 AAGAGAGCGCCAAGTGTTGT 60.179 50.000 2.29 0.00 0.00 3.32
805 815 1.852067 GCGCCAAGTGTTGTTCCGAT 61.852 55.000 0.00 0.00 0.00 4.18
877 887 5.824904 AACAAATCAGATTTCGATCCCAG 57.175 39.130 5.32 0.00 0.00 4.45
881 891 3.634397 TCAGATTTCGATCCCAGCTTT 57.366 42.857 0.00 0.00 0.00 3.51
888 898 1.153147 GATCCCAGCTTTCCCCGAC 60.153 63.158 0.00 0.00 0.00 4.79
976 1046 2.634777 CCCGATCTCGACTCTCGC 59.365 66.667 0.22 0.00 43.02 5.03
1272 1344 4.814294 GACGGCGGCGTGGATCTT 62.814 66.667 42.25 15.88 0.00 2.40
1297 1369 2.125952 CGCTCTGGATGCACGACA 60.126 61.111 0.00 0.00 0.00 4.35
1298 1370 1.737735 CGCTCTGGATGCACGACAA 60.738 57.895 0.00 0.00 0.00 3.18
1392 1479 2.983930 GCTCGAGTCAGAGTGCCGT 61.984 63.158 15.13 0.00 40.26 5.68
1659 1915 3.800863 CAGCAGAAGCAGCAGCCG 61.801 66.667 0.00 0.00 45.49 5.52
1734 2155 2.691771 CCAGCAGAAGCAGCAGCAG 61.692 63.158 3.17 0.00 45.49 4.24
1735 2156 3.056938 AGCAGAAGCAGCAGCAGC 61.057 61.111 3.17 0.46 45.49 5.25
1736 2157 3.362797 GCAGAAGCAGCAGCAGCA 61.363 61.111 12.92 0.00 45.49 4.41
1737 2158 2.871099 CAGAAGCAGCAGCAGCAG 59.129 61.111 12.92 0.00 45.49 4.24
2175 2810 4.377328 CGAATTTCTTCAGCATCGAACACA 60.377 41.667 0.00 0.00 32.38 3.72
2340 2982 4.123506 TCAACAAGACTTGTCATGCGTTA 58.876 39.130 20.81 0.00 44.59 3.18
2388 3030 3.370527 GGGGTAGTTGTATCTGCATGTGT 60.371 47.826 0.00 0.00 0.00 3.72
2389 3031 3.871594 GGGTAGTTGTATCTGCATGTGTC 59.128 47.826 0.00 0.00 0.00 3.67
2390 3032 3.551890 GGTAGTTGTATCTGCATGTGTCG 59.448 47.826 0.00 0.00 0.00 4.35
2391 3033 2.621338 AGTTGTATCTGCATGTGTCGG 58.379 47.619 0.00 0.00 0.00 4.79
2392 3034 2.028112 AGTTGTATCTGCATGTGTCGGT 60.028 45.455 0.00 0.00 0.00 4.69
2393 3035 2.293677 TGTATCTGCATGTGTCGGTC 57.706 50.000 0.00 0.00 0.00 4.79
2394 3036 1.824852 TGTATCTGCATGTGTCGGTCT 59.175 47.619 0.00 0.00 0.00 3.85
2395 3037 2.196749 GTATCTGCATGTGTCGGTCTG 58.803 52.381 0.00 0.00 0.00 3.51
2396 3038 0.742281 ATCTGCATGTGTCGGTCTGC 60.742 55.000 0.00 0.00 35.21 4.26
2397 3039 1.375140 CTGCATGTGTCGGTCTGCT 60.375 57.895 0.00 0.00 35.66 4.24
2398 3040 1.632948 CTGCATGTGTCGGTCTGCTG 61.633 60.000 0.00 0.00 35.66 4.41
2399 3041 3.031964 GCATGTGTCGGTCTGCTGC 62.032 63.158 0.00 0.00 0.00 5.25
2400 3042 2.433145 ATGTGTCGGTCTGCTGCG 60.433 61.111 0.00 0.00 0.00 5.18
2401 3043 3.226429 ATGTGTCGGTCTGCTGCGT 62.226 57.895 0.00 0.00 0.00 5.24
2402 3044 3.106407 GTGTCGGTCTGCTGCGTC 61.106 66.667 0.00 0.00 0.00 5.19
2403 3045 3.295273 TGTCGGTCTGCTGCGTCT 61.295 61.111 0.00 0.00 0.00 4.18
2404 3046 2.807045 GTCGGTCTGCTGCGTCTG 60.807 66.667 0.00 0.00 0.00 3.51
2405 3047 4.724602 TCGGTCTGCTGCGTCTGC 62.725 66.667 0.00 2.64 43.20 4.26
2415 3057 2.736995 GCGTCTGCGGCTGTTGTA 60.737 61.111 0.00 0.00 38.78 2.41
2416 3058 2.100631 GCGTCTGCGGCTGTTGTAT 61.101 57.895 0.00 0.00 38.78 2.29
2417 3059 1.999051 CGTCTGCGGCTGTTGTATC 59.001 57.895 0.00 0.00 0.00 2.24
2418 3060 0.458543 CGTCTGCGGCTGTTGTATCT 60.459 55.000 0.00 0.00 0.00 1.98
2419 3061 1.002366 GTCTGCGGCTGTTGTATCTG 58.998 55.000 0.00 0.00 0.00 2.90
2420 3062 0.740868 TCTGCGGCTGTTGTATCTGC 60.741 55.000 0.00 0.00 0.00 4.26
2421 3063 1.003959 TGCGGCTGTTGTATCTGCA 60.004 52.632 0.00 0.00 39.52 4.41
2422 3064 0.392863 TGCGGCTGTTGTATCTGCAT 60.393 50.000 0.00 0.00 37.21 3.96
2423 3065 0.305922 GCGGCTGTTGTATCTGCATC 59.694 55.000 0.00 0.00 34.71 3.91
2424 3066 0.940126 CGGCTGTTGTATCTGCATCC 59.060 55.000 0.00 0.00 34.71 3.51
2425 3067 1.473965 CGGCTGTTGTATCTGCATCCT 60.474 52.381 0.00 0.00 34.71 3.24
2426 3068 2.224042 CGGCTGTTGTATCTGCATCCTA 60.224 50.000 0.00 0.00 34.71 2.94
2427 3069 3.134458 GGCTGTTGTATCTGCATCCTAC 58.866 50.000 0.00 0.00 34.71 3.18
2428 3070 3.181461 GGCTGTTGTATCTGCATCCTACT 60.181 47.826 0.00 0.00 34.71 2.57
2429 3071 4.446371 GCTGTTGTATCTGCATCCTACTT 58.554 43.478 0.00 0.00 33.55 2.24
2430 3072 4.272018 GCTGTTGTATCTGCATCCTACTTG 59.728 45.833 0.00 0.00 33.55 3.16
2431 3073 5.420725 TGTTGTATCTGCATCCTACTTGT 57.579 39.130 0.00 0.00 0.00 3.16
2432 3074 6.538945 TGTTGTATCTGCATCCTACTTGTA 57.461 37.500 0.00 0.00 0.00 2.41
2433 3075 7.124573 TGTTGTATCTGCATCCTACTTGTAT 57.875 36.000 0.00 0.00 0.00 2.29
2434 3076 7.564793 TGTTGTATCTGCATCCTACTTGTATT 58.435 34.615 0.00 0.00 0.00 1.89
2435 3077 8.046708 TGTTGTATCTGCATCCTACTTGTATTT 58.953 33.333 0.00 0.00 0.00 1.40
2436 3078 8.338259 GTTGTATCTGCATCCTACTTGTATTTG 58.662 37.037 0.00 0.00 0.00 2.32
2437 3079 6.483307 TGTATCTGCATCCTACTTGTATTTGC 59.517 38.462 0.00 0.00 0.00 3.68
2438 3080 4.842574 TCTGCATCCTACTTGTATTTGCA 58.157 39.130 0.00 0.00 37.13 4.08
2439 3081 5.439721 TCTGCATCCTACTTGTATTTGCAT 58.560 37.500 10.56 0.00 37.90 3.96
2440 3082 5.528690 TCTGCATCCTACTTGTATTTGCATC 59.471 40.000 10.56 0.00 37.90 3.91
2441 3083 5.439721 TGCATCCTACTTGTATTTGCATCT 58.560 37.500 0.00 0.00 34.03 2.90
2442 3084 5.528690 TGCATCCTACTTGTATTTGCATCTC 59.471 40.000 0.00 0.00 34.03 2.75
2443 3085 5.762218 GCATCCTACTTGTATTTGCATCTCT 59.238 40.000 0.00 0.00 0.00 3.10
2444 3086 6.261826 GCATCCTACTTGTATTTGCATCTCTT 59.738 38.462 0.00 0.00 0.00 2.85
2445 3087 7.637229 CATCCTACTTGTATTTGCATCTCTTG 58.363 38.462 0.00 0.00 0.00 3.02
2446 3088 6.711277 TCCTACTTGTATTTGCATCTCTTGT 58.289 36.000 0.00 0.00 0.00 3.16
2447 3089 6.818644 TCCTACTTGTATTTGCATCTCTTGTC 59.181 38.462 0.00 0.00 0.00 3.18
2448 3090 6.820656 CCTACTTGTATTTGCATCTCTTGTCT 59.179 38.462 0.00 0.00 0.00 3.41
2449 3091 6.734104 ACTTGTATTTGCATCTCTTGTCTC 57.266 37.500 0.00 0.00 0.00 3.36
2450 3092 6.471146 ACTTGTATTTGCATCTCTTGTCTCT 58.529 36.000 0.00 0.00 0.00 3.10
2451 3093 7.615403 ACTTGTATTTGCATCTCTTGTCTCTA 58.385 34.615 0.00 0.00 0.00 2.43
2452 3094 8.263640 ACTTGTATTTGCATCTCTTGTCTCTAT 58.736 33.333 0.00 0.00 0.00 1.98
2624 3338 3.291584 TCAAGGATGCGACTCACTCTAT 58.708 45.455 0.00 0.00 0.00 1.98
2625 3339 4.461198 TCAAGGATGCGACTCACTCTATA 58.539 43.478 0.00 0.00 0.00 1.31
2626 3340 4.887655 TCAAGGATGCGACTCACTCTATAA 59.112 41.667 0.00 0.00 0.00 0.98
2915 3670 4.237843 TGCCCATGAGAAATCTAGAGGAT 58.762 43.478 0.00 0.00 35.97 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
256 266 1.442857 GTCGCTCACACTCCACTCG 60.443 63.158 0.00 0.00 0.00 4.18
257 267 1.442857 CGTCGCTCACACTCCACTC 60.443 63.158 0.00 0.00 0.00 3.51
258 268 2.645567 CGTCGCTCACACTCCACT 59.354 61.111 0.00 0.00 0.00 4.00
259 269 2.430921 CCGTCGCTCACACTCCAC 60.431 66.667 0.00 0.00 0.00 4.02
260 270 3.680786 CCCGTCGCTCACACTCCA 61.681 66.667 0.00 0.00 0.00 3.86
261 271 4.436998 CCCCGTCGCTCACACTCC 62.437 72.222 0.00 0.00 0.00 3.85
262 272 3.343788 CTCCCCGTCGCTCACACTC 62.344 68.421 0.00 0.00 0.00 3.51
263 273 3.374402 CTCCCCGTCGCTCACACT 61.374 66.667 0.00 0.00 0.00 3.55
264 274 3.681835 ACTCCCCGTCGCTCACAC 61.682 66.667 0.00 0.00 0.00 3.82
265 275 3.680786 CACTCCCCGTCGCTCACA 61.681 66.667 0.00 0.00 0.00 3.58
266 276 4.436998 CCACTCCCCGTCGCTCAC 62.437 72.222 0.00 0.00 0.00 3.51
276 286 2.081585 AAAACAGAGCCCCCACTCCC 62.082 60.000 0.00 0.00 37.39 4.30
277 287 0.895559 CAAAACAGAGCCCCCACTCC 60.896 60.000 0.00 0.00 37.39 3.85
278 288 0.178990 ACAAAACAGAGCCCCCACTC 60.179 55.000 0.00 0.00 36.91 3.51
279 289 1.145571 TACAAAACAGAGCCCCCACT 58.854 50.000 0.00 0.00 0.00 4.00
280 290 1.244816 GTACAAAACAGAGCCCCCAC 58.755 55.000 0.00 0.00 0.00 4.61
281 291 0.111639 GGTACAAAACAGAGCCCCCA 59.888 55.000 0.00 0.00 0.00 4.96
282 292 0.958876 CGGTACAAAACAGAGCCCCC 60.959 60.000 0.00 0.00 0.00 5.40
283 293 0.035739 TCGGTACAAAACAGAGCCCC 59.964 55.000 0.00 0.00 0.00 5.80
284 294 1.154197 GTCGGTACAAAACAGAGCCC 58.846 55.000 0.00 0.00 32.63 5.19
285 295 1.798813 CTGTCGGTACAAAACAGAGCC 59.201 52.381 13.38 0.00 34.49 4.70
286 296 1.194772 GCTGTCGGTACAAAACAGAGC 59.805 52.381 19.70 7.49 34.49 4.09
287 297 1.798813 GGCTGTCGGTACAAAACAGAG 59.201 52.381 19.70 2.53 34.49 3.35
288 298 1.541670 GGGCTGTCGGTACAAAACAGA 60.542 52.381 19.70 0.00 34.49 3.41
289 299 0.872388 GGGCTGTCGGTACAAAACAG 59.128 55.000 14.01 14.01 34.49 3.16
290 300 0.470766 AGGGCTGTCGGTACAAAACA 59.529 50.000 0.00 0.00 34.49 2.83
291 301 2.460757 TAGGGCTGTCGGTACAAAAC 57.539 50.000 0.00 0.00 34.49 2.43
292 302 2.769893 GTTAGGGCTGTCGGTACAAAA 58.230 47.619 0.00 0.00 34.49 2.44
293 303 1.337074 CGTTAGGGCTGTCGGTACAAA 60.337 52.381 0.00 0.00 34.49 2.83
294 304 0.244450 CGTTAGGGCTGTCGGTACAA 59.756 55.000 0.00 0.00 34.49 2.41
295 305 1.597797 CCGTTAGGGCTGTCGGTACA 61.598 60.000 0.00 0.00 38.45 2.90
296 306 1.140375 CCGTTAGGGCTGTCGGTAC 59.860 63.158 0.00 0.00 38.45 3.34
297 307 3.607163 CCGTTAGGGCTGTCGGTA 58.393 61.111 0.00 0.00 38.45 4.02
306 316 2.435410 GGTTGACGGCCGTTAGGG 60.435 66.667 34.65 0.76 38.20 3.53
307 317 2.435410 GGGTTGACGGCCGTTAGG 60.435 66.667 34.65 1.68 41.62 2.69
308 318 2.030958 GTGGGTTGACGGCCGTTAG 61.031 63.158 34.65 2.16 0.00 2.34
309 319 2.030862 GTGGGTTGACGGCCGTTA 59.969 61.111 34.65 27.43 0.00 3.18
310 320 3.409605 AAGTGGGTTGACGGCCGTT 62.410 57.895 34.65 16.76 0.00 4.44
311 321 3.868985 AAGTGGGTTGACGGCCGT 61.869 61.111 34.89 34.89 0.00 5.68
312 322 3.353836 CAAGTGGGTTGACGGCCG 61.354 66.667 26.86 26.86 38.60 6.13
313 323 3.670377 GCAAGTGGGTTGACGGCC 61.670 66.667 0.00 0.00 38.60 6.13
314 324 3.670377 GGCAAGTGGGTTGACGGC 61.670 66.667 0.00 0.00 38.60 5.68
317 327 1.227853 AGACGGCAAGTGGGTTGAC 60.228 57.895 0.00 0.00 41.39 3.18
318 328 1.227823 CAGACGGCAAGTGGGTTGA 60.228 57.895 0.00 0.00 38.60 3.18
319 329 2.260869 CCAGACGGCAAGTGGGTTG 61.261 63.158 0.00 0.00 39.41 3.77
320 330 2.113139 CCAGACGGCAAGTGGGTT 59.887 61.111 0.00 0.00 0.00 4.11
365 375 1.000396 ATTTCTGACAGGGCTGGCC 60.000 57.895 13.15 13.15 37.98 5.36
366 376 1.372087 CGATTTCTGACAGGGCTGGC 61.372 60.000 1.81 0.00 39.62 4.85
367 377 0.745845 CCGATTTCTGACAGGGCTGG 60.746 60.000 1.81 0.00 34.19 4.85
368 378 0.745845 CCCGATTTCTGACAGGGCTG 60.746 60.000 1.81 0.00 35.09 4.85
369 379 1.201429 ACCCGATTTCTGACAGGGCT 61.201 55.000 1.81 0.00 45.75 5.19
370 380 0.322546 AACCCGATTTCTGACAGGGC 60.323 55.000 1.81 0.00 45.75 5.19
372 382 3.684788 CAGTTAACCCGATTTCTGACAGG 59.315 47.826 0.88 0.00 0.00 4.00
373 383 3.125316 GCAGTTAACCCGATTTCTGACAG 59.875 47.826 0.88 0.00 0.00 3.51
374 384 3.071479 GCAGTTAACCCGATTTCTGACA 58.929 45.455 0.88 0.00 0.00 3.58
375 385 2.093783 CGCAGTTAACCCGATTTCTGAC 59.906 50.000 9.87 0.00 0.00 3.51
376 386 2.343101 CGCAGTTAACCCGATTTCTGA 58.657 47.619 9.87 0.00 0.00 3.27
377 387 1.396996 CCGCAGTTAACCCGATTTCTG 59.603 52.381 15.40 1.18 0.00 3.02
378 388 1.734163 CCGCAGTTAACCCGATTTCT 58.266 50.000 15.40 0.00 0.00 2.52
379 389 0.098200 GCCGCAGTTAACCCGATTTC 59.902 55.000 15.40 1.82 0.00 2.17
380 390 0.606944 TGCCGCAGTTAACCCGATTT 60.607 50.000 15.40 0.00 0.00 2.17
381 391 0.606944 TTGCCGCAGTTAACCCGATT 60.607 50.000 15.40 0.00 0.00 3.34
382 392 0.606944 TTTGCCGCAGTTAACCCGAT 60.607 50.000 15.40 0.00 0.00 4.18
383 393 1.227883 TTTGCCGCAGTTAACCCGA 60.228 52.632 15.40 0.00 0.00 5.14
384 394 1.081708 GTTTGCCGCAGTTAACCCG 60.082 57.895 0.88 5.66 0.00 5.28
385 395 1.287815 GGTTTGCCGCAGTTAACCC 59.712 57.895 12.67 0.00 35.17 4.11
386 396 4.957266 GGTTTGCCGCAGTTAACC 57.043 55.556 9.21 9.21 33.90 2.85
396 406 2.232756 AAACAAATGACCGGTTTGCC 57.767 45.000 9.42 0.00 39.55 4.52
397 407 5.915812 ATAAAAACAAATGACCGGTTTGC 57.084 34.783 9.42 0.00 39.55 3.68
398 408 7.436673 TCTCAATAAAAACAAATGACCGGTTTG 59.563 33.333 9.42 12.66 41.22 2.93
399 409 7.493367 TCTCAATAAAAACAAATGACCGGTTT 58.507 30.769 9.42 0.00 36.37 3.27
400 410 7.045126 TCTCAATAAAAACAAATGACCGGTT 57.955 32.000 9.42 0.00 0.00 4.44
401 411 6.642707 TCTCAATAAAAACAAATGACCGGT 57.357 33.333 6.92 6.92 0.00 5.28
402 412 7.938563 TTTCTCAATAAAAACAAATGACCGG 57.061 32.000 0.00 0.00 0.00 5.28
419 429 9.796120 CACCACTTTACTTGTAAATTTTCTCAA 57.204 29.630 0.00 0.00 0.00 3.02
420 430 8.410141 CCACCACTTTACTTGTAAATTTTCTCA 58.590 33.333 0.00 0.00 0.00 3.27
421 431 8.626526 TCCACCACTTTACTTGTAAATTTTCTC 58.373 33.333 0.00 0.00 0.00 2.87
422 432 8.528044 TCCACCACTTTACTTGTAAATTTTCT 57.472 30.769 0.00 0.00 0.00 2.52
423 433 9.758651 AATCCACCACTTTACTTGTAAATTTTC 57.241 29.630 0.00 0.00 0.00 2.29
427 437 9.541143 CAAAAATCCACCACTTTACTTGTAAAT 57.459 29.630 6.44 0.00 0.00 1.40
428 438 7.982354 CCAAAAATCCACCACTTTACTTGTAAA 59.018 33.333 5.92 5.92 0.00 2.01
429 439 7.418025 CCCAAAAATCCACCACTTTACTTGTAA 60.418 37.037 0.00 0.00 0.00 2.41
430 440 6.041069 CCCAAAAATCCACCACTTTACTTGTA 59.959 38.462 0.00 0.00 0.00 2.41
431 441 5.163353 CCCAAAAATCCACCACTTTACTTGT 60.163 40.000 0.00 0.00 0.00 3.16
432 442 5.069781 TCCCAAAAATCCACCACTTTACTTG 59.930 40.000 0.00 0.00 0.00 3.16
433 443 5.069914 GTCCCAAAAATCCACCACTTTACTT 59.930 40.000 0.00 0.00 0.00 2.24
434 444 4.587262 GTCCCAAAAATCCACCACTTTACT 59.413 41.667 0.00 0.00 0.00 2.24
435 445 4.557895 CGTCCCAAAAATCCACCACTTTAC 60.558 45.833 0.00 0.00 0.00 2.01
436 446 3.570550 CGTCCCAAAAATCCACCACTTTA 59.429 43.478 0.00 0.00 0.00 1.85
437 447 2.364002 CGTCCCAAAAATCCACCACTTT 59.636 45.455 0.00 0.00 0.00 2.66
438 448 1.960689 CGTCCCAAAAATCCACCACTT 59.039 47.619 0.00 0.00 0.00 3.16
439 449 1.616159 CGTCCCAAAAATCCACCACT 58.384 50.000 0.00 0.00 0.00 4.00
440 450 0.038618 GCGTCCCAAAAATCCACCAC 60.039 55.000 0.00 0.00 0.00 4.16
441 451 1.519751 CGCGTCCCAAAAATCCACCA 61.520 55.000 0.00 0.00 0.00 4.17
442 452 1.211709 CGCGTCCCAAAAATCCACC 59.788 57.895 0.00 0.00 0.00 4.61
443 453 1.443702 GCGCGTCCCAAAAATCCAC 60.444 57.895 8.43 0.00 0.00 4.02
444 454 1.602323 AGCGCGTCCCAAAAATCCA 60.602 52.632 8.43 0.00 0.00 3.41
445 455 1.154035 CAGCGCGTCCCAAAAATCC 60.154 57.895 8.43 0.00 0.00 3.01
446 456 1.154035 CCAGCGCGTCCCAAAAATC 60.154 57.895 8.43 0.00 0.00 2.17
447 457 1.175983 TTCCAGCGCGTCCCAAAAAT 61.176 50.000 8.43 0.00 0.00 1.82
448 458 1.384989 TTTCCAGCGCGTCCCAAAAA 61.385 50.000 8.43 0.00 0.00 1.94
449 459 1.175983 ATTTCCAGCGCGTCCCAAAA 61.176 50.000 8.43 3.13 0.00 2.44
450 460 1.602323 ATTTCCAGCGCGTCCCAAA 60.602 52.632 8.43 2.83 0.00 3.28
451 461 2.033448 ATTTCCAGCGCGTCCCAA 59.967 55.556 8.43 0.00 0.00 4.12
452 462 2.745884 CATTTCCAGCGCGTCCCA 60.746 61.111 8.43 0.00 0.00 4.37
453 463 2.746277 ACATTTCCAGCGCGTCCC 60.746 61.111 8.43 0.00 0.00 4.46
454 464 2.480555 CACATTTCCAGCGCGTCC 59.519 61.111 8.43 0.00 0.00 4.79
455 465 2.325082 ACCACATTTCCAGCGCGTC 61.325 57.895 8.43 0.00 0.00 5.19
456 466 2.281484 ACCACATTTCCAGCGCGT 60.281 55.556 8.43 0.00 0.00 6.01
457 467 2.176546 CACCACATTTCCAGCGCG 59.823 61.111 0.00 0.00 0.00 6.86
458 468 2.568090 CCACCACATTTCCAGCGC 59.432 61.111 0.00 0.00 0.00 5.92
459 469 1.804396 TTGCCACCACATTTCCAGCG 61.804 55.000 0.00 0.00 0.00 5.18
460 470 0.609662 ATTGCCACCACATTTCCAGC 59.390 50.000 0.00 0.00 0.00 4.85
461 471 2.613474 CCAATTGCCACCACATTTCCAG 60.613 50.000 0.00 0.00 0.00 3.86
462 472 1.347050 CCAATTGCCACCACATTTCCA 59.653 47.619 0.00 0.00 0.00 3.53
463 473 1.622811 TCCAATTGCCACCACATTTCC 59.377 47.619 0.00 0.00 0.00 3.13
464 474 3.264104 CATCCAATTGCCACCACATTTC 58.736 45.455 0.00 0.00 0.00 2.17
465 475 2.616001 GCATCCAATTGCCACCACATTT 60.616 45.455 0.00 0.00 36.60 2.32
466 476 1.065998 GCATCCAATTGCCACCACATT 60.066 47.619 0.00 0.00 36.60 2.71
467 477 0.538118 GCATCCAATTGCCACCACAT 59.462 50.000 0.00 0.00 36.60 3.21
468 478 0.542467 AGCATCCAATTGCCACCACA 60.542 50.000 0.00 0.00 43.83 4.17
469 479 0.609662 AAGCATCCAATTGCCACCAC 59.390 50.000 0.00 0.00 43.83 4.16
470 480 1.350071 AAAGCATCCAATTGCCACCA 58.650 45.000 0.00 0.00 43.83 4.17
471 481 3.055891 AGTTAAAGCATCCAATTGCCACC 60.056 43.478 0.00 0.00 43.83 4.61
472 482 4.192429 AGTTAAAGCATCCAATTGCCAC 57.808 40.909 0.00 0.00 43.83 5.01
473 483 4.282957 TGAAGTTAAAGCATCCAATTGCCA 59.717 37.500 0.00 0.00 43.83 4.92
474 484 4.819769 TGAAGTTAAAGCATCCAATTGCC 58.180 39.130 0.00 0.00 43.83 4.52
475 485 6.783892 TTTGAAGTTAAAGCATCCAATTGC 57.216 33.333 0.00 0.00 43.09 3.56
476 486 8.225107 CACATTTGAAGTTAAAGCATCCAATTG 58.775 33.333 0.00 0.00 0.00 2.32
477 487 7.388500 CCACATTTGAAGTTAAAGCATCCAATT 59.612 33.333 0.00 0.00 0.00 2.32
478 488 6.875195 CCACATTTGAAGTTAAAGCATCCAAT 59.125 34.615 0.00 0.00 0.00 3.16
479 489 6.183360 ACCACATTTGAAGTTAAAGCATCCAA 60.183 34.615 0.00 0.00 0.00 3.53
480 490 5.304101 ACCACATTTGAAGTTAAAGCATCCA 59.696 36.000 0.00 0.00 0.00 3.41
481 491 5.634859 CACCACATTTGAAGTTAAAGCATCC 59.365 40.000 0.00 0.00 0.00 3.51
482 492 5.634859 CCACCACATTTGAAGTTAAAGCATC 59.365 40.000 0.00 0.00 0.00 3.91
483 493 5.070313 ACCACCACATTTGAAGTTAAAGCAT 59.930 36.000 0.00 0.00 0.00 3.79
484 494 4.404073 ACCACCACATTTGAAGTTAAAGCA 59.596 37.500 0.00 0.00 0.00 3.91
485 495 4.944048 ACCACCACATTTGAAGTTAAAGC 58.056 39.130 0.00 0.00 0.00 3.51
486 496 7.841915 AAAACCACCACATTTGAAGTTAAAG 57.158 32.000 0.00 0.00 0.00 1.85
487 497 7.361286 GCAAAAACCACCACATTTGAAGTTAAA 60.361 33.333 0.00 0.00 35.34 1.52
488 498 6.092807 GCAAAAACCACCACATTTGAAGTTAA 59.907 34.615 0.00 0.00 35.34 2.01
489 499 5.582665 GCAAAAACCACCACATTTGAAGTTA 59.417 36.000 0.00 0.00 35.34 2.24
490 500 4.394610 GCAAAAACCACCACATTTGAAGTT 59.605 37.500 0.00 0.00 35.34 2.66
491 501 3.938334 GCAAAAACCACCACATTTGAAGT 59.062 39.130 0.00 0.00 35.34 3.01
492 502 3.937706 TGCAAAAACCACCACATTTGAAG 59.062 39.130 0.00 0.00 35.34 3.02
493 503 3.942829 TGCAAAAACCACCACATTTGAA 58.057 36.364 0.00 0.00 35.34 2.69
494 504 3.616956 TGCAAAAACCACCACATTTGA 57.383 38.095 0.00 0.00 35.34 2.69
495 505 4.897025 ATTGCAAAAACCACCACATTTG 57.103 36.364 1.71 0.00 36.19 2.32
496 506 4.946157 TGAATTGCAAAAACCACCACATTT 59.054 33.333 1.71 0.00 0.00 2.32
497 507 4.335037 GTGAATTGCAAAAACCACCACATT 59.665 37.500 1.71 0.00 0.00 2.71
498 508 3.876320 GTGAATTGCAAAAACCACCACAT 59.124 39.130 1.71 0.00 0.00 3.21
499 509 3.055530 AGTGAATTGCAAAAACCACCACA 60.056 39.130 1.71 0.00 0.00 4.17
500 510 3.530535 AGTGAATTGCAAAAACCACCAC 58.469 40.909 1.71 4.38 0.00 4.16
501 511 3.431486 GGAGTGAATTGCAAAAACCACCA 60.431 43.478 1.71 0.00 0.00 4.17
502 512 3.130633 GGAGTGAATTGCAAAAACCACC 58.869 45.455 1.71 5.58 0.00 4.61
503 513 2.794350 CGGAGTGAATTGCAAAAACCAC 59.206 45.455 1.71 9.27 0.00 4.16
504 514 2.690497 TCGGAGTGAATTGCAAAAACCA 59.310 40.909 1.71 0.00 0.00 3.67
505 515 3.363341 TCGGAGTGAATTGCAAAAACC 57.637 42.857 1.71 0.98 0.00 3.27
506 516 5.710613 TTTTCGGAGTGAATTGCAAAAAC 57.289 34.783 1.71 2.06 36.22 2.43
507 517 6.917217 AATTTTCGGAGTGAATTGCAAAAA 57.083 29.167 1.71 0.00 36.22 1.94
508 518 7.170658 CCTTAATTTTCGGAGTGAATTGCAAAA 59.829 33.333 1.71 0.00 36.22 2.44
509 519 6.644592 CCTTAATTTTCGGAGTGAATTGCAAA 59.355 34.615 1.71 0.00 36.22 3.68
510 520 6.155827 CCTTAATTTTCGGAGTGAATTGCAA 58.844 36.000 0.00 0.00 36.22 4.08
511 521 5.336372 CCCTTAATTTTCGGAGTGAATTGCA 60.336 40.000 0.00 0.00 36.22 4.08
512 522 5.102313 CCCTTAATTTTCGGAGTGAATTGC 58.898 41.667 0.00 0.00 36.22 3.56
513 523 6.509418 TCCCTTAATTTTCGGAGTGAATTG 57.491 37.500 0.00 0.00 36.22 2.32
514 524 6.405842 GCATCCCTTAATTTTCGGAGTGAATT 60.406 38.462 0.00 0.00 36.22 2.17
515 525 5.067805 GCATCCCTTAATTTTCGGAGTGAAT 59.932 40.000 0.00 0.00 36.22 2.57
516 526 4.398044 GCATCCCTTAATTTTCGGAGTGAA 59.602 41.667 0.00 0.00 33.85 3.18
517 527 3.945285 GCATCCCTTAATTTTCGGAGTGA 59.055 43.478 0.00 0.00 0.00 3.41
518 528 3.694072 TGCATCCCTTAATTTTCGGAGTG 59.306 43.478 0.00 0.00 0.00 3.51
519 529 3.694566 GTGCATCCCTTAATTTTCGGAGT 59.305 43.478 0.00 0.00 0.00 3.85
520 530 3.066760 GGTGCATCCCTTAATTTTCGGAG 59.933 47.826 0.00 0.00 0.00 4.63
521 531 3.020984 GGTGCATCCCTTAATTTTCGGA 58.979 45.455 0.00 0.00 0.00 4.55
522 532 3.023832 AGGTGCATCCCTTAATTTTCGG 58.976 45.455 0.00 0.00 36.75 4.30
523 533 3.181487 CCAGGTGCATCCCTTAATTTTCG 60.181 47.826 0.00 0.00 36.75 3.46
524 534 3.430790 GCCAGGTGCATCCCTTAATTTTC 60.431 47.826 0.00 0.00 40.77 2.29
525 535 2.501316 GCCAGGTGCATCCCTTAATTTT 59.499 45.455 0.00 0.00 40.77 1.82
526 536 2.110578 GCCAGGTGCATCCCTTAATTT 58.889 47.619 0.00 0.00 40.77 1.82
527 537 1.689258 GGCCAGGTGCATCCCTTAATT 60.689 52.381 0.00 0.00 43.89 1.40
528 538 0.106015 GGCCAGGTGCATCCCTTAAT 60.106 55.000 0.00 0.00 43.89 1.40
529 539 1.306296 GGCCAGGTGCATCCCTTAA 59.694 57.895 0.00 0.00 43.89 1.85
530 540 2.689691 GGGCCAGGTGCATCCCTTA 61.690 63.158 4.39 0.00 43.89 2.69
531 541 4.066139 GGGCCAGGTGCATCCCTT 62.066 66.667 4.39 0.00 43.89 3.95
542 552 3.801068 TTTCAACGGGGTGGGCCAG 62.801 63.158 6.40 0.00 36.17 4.85
543 553 3.153629 ATTTCAACGGGGTGGGCCA 62.154 57.895 0.00 0.00 36.17 5.36
544 554 2.283604 ATTTCAACGGGGTGGGCC 60.284 61.111 0.00 0.00 0.00 5.80
545 555 1.595093 CTGATTTCAACGGGGTGGGC 61.595 60.000 0.00 0.00 0.00 5.36
546 556 0.965363 CCTGATTTCAACGGGGTGGG 60.965 60.000 0.00 0.00 0.00 4.61
547 557 0.965363 CCCTGATTTCAACGGGGTGG 60.965 60.000 0.00 0.00 45.91 4.61
548 558 2.566824 CCCTGATTTCAACGGGGTG 58.433 57.895 0.00 0.00 45.91 4.61
551 561 4.337013 CCCCCTGATTTCAACGGG 57.663 61.111 5.69 5.69 36.01 5.28
565 575 3.864789 TTCATAAATCTCTCTGCCCCC 57.135 47.619 0.00 0.00 0.00 5.40
566 576 4.140536 CCTTTCATAAATCTCTCTGCCCC 58.859 47.826 0.00 0.00 0.00 5.80
567 577 3.567585 GCCTTTCATAAATCTCTCTGCCC 59.432 47.826 0.00 0.00 0.00 5.36
568 578 4.202441 TGCCTTTCATAAATCTCTCTGCC 58.798 43.478 0.00 0.00 0.00 4.85
569 579 5.824904 TTGCCTTTCATAAATCTCTCTGC 57.175 39.130 0.00 0.00 0.00 4.26
570 580 6.039493 AGCATTGCCTTTCATAAATCTCTCTG 59.961 38.462 4.70 0.00 0.00 3.35
571 581 6.039493 CAGCATTGCCTTTCATAAATCTCTCT 59.961 38.462 4.70 0.00 0.00 3.10
572 582 6.207213 CAGCATTGCCTTTCATAAATCTCTC 58.793 40.000 4.70 0.00 0.00 3.20
573 583 5.068723 CCAGCATTGCCTTTCATAAATCTCT 59.931 40.000 4.70 0.00 0.00 3.10
574 584 5.287226 CCAGCATTGCCTTTCATAAATCTC 58.713 41.667 4.70 0.00 0.00 2.75
575 585 4.100498 CCCAGCATTGCCTTTCATAAATCT 59.900 41.667 4.70 0.00 0.00 2.40
576 586 4.374399 CCCAGCATTGCCTTTCATAAATC 58.626 43.478 4.70 0.00 0.00 2.17
577 587 3.432608 GCCCAGCATTGCCTTTCATAAAT 60.433 43.478 4.70 0.00 0.00 1.40
578 588 2.093553 GCCCAGCATTGCCTTTCATAAA 60.094 45.455 4.70 0.00 0.00 1.40
579 589 1.481772 GCCCAGCATTGCCTTTCATAA 59.518 47.619 4.70 0.00 0.00 1.90
580 590 1.113788 GCCCAGCATTGCCTTTCATA 58.886 50.000 4.70 0.00 0.00 2.15
581 591 1.619807 GGCCCAGCATTGCCTTTCAT 61.620 55.000 4.70 0.00 44.46 2.57
582 592 2.285024 GGCCCAGCATTGCCTTTCA 61.285 57.895 4.70 0.00 44.46 2.69
583 593 2.580815 GGCCCAGCATTGCCTTTC 59.419 61.111 4.70 0.00 44.46 2.62
589 599 2.284112 AAGTGGGGCCCAGCATTG 60.284 61.111 29.66 0.00 32.34 2.82
590 600 2.284112 CAAGTGGGGCCCAGCATT 60.284 61.111 29.66 18.62 32.34 3.56
591 601 2.677968 AAACAAGTGGGGCCCAGCAT 62.678 55.000 29.66 12.87 32.34 3.79
592 602 2.012824 TAAACAAGTGGGGCCCAGCA 62.013 55.000 29.66 10.99 32.34 4.41
593 603 0.830023 TTAAACAAGTGGGGCCCAGC 60.830 55.000 29.66 20.78 32.34 4.85
594 604 1.937191 ATTAAACAAGTGGGGCCCAG 58.063 50.000 29.66 17.94 32.34 4.45
595 605 2.407340 AATTAAACAAGTGGGGCCCA 57.593 45.000 24.76 24.76 0.00 5.36
596 606 5.182487 CAATAAATTAAACAAGTGGGGCCC 58.818 41.667 18.17 18.17 0.00 5.80
597 607 4.634004 GCAATAAATTAAACAAGTGGGGCC 59.366 41.667 0.00 0.00 0.00 5.80
598 608 4.328712 CGCAATAAATTAAACAAGTGGGGC 59.671 41.667 0.00 0.00 0.00 5.80
599 609 4.867608 CCGCAATAAATTAAACAAGTGGGG 59.132 41.667 4.34 4.34 0.00 4.96
600 610 4.328712 GCCGCAATAAATTAAACAAGTGGG 59.671 41.667 0.00 0.00 0.00 4.61
601 611 4.926238 TGCCGCAATAAATTAAACAAGTGG 59.074 37.500 0.00 0.00 0.00 4.00
602 612 5.861251 TCTGCCGCAATAAATTAAACAAGTG 59.139 36.000 0.00 0.00 0.00 3.16
603 613 6.019779 TCTGCCGCAATAAATTAAACAAGT 57.980 33.333 0.00 0.00 0.00 3.16
604 614 6.321717 TCTCTGCCGCAATAAATTAAACAAG 58.678 36.000 0.00 0.00 0.00 3.16
605 615 6.260870 TCTCTGCCGCAATAAATTAAACAA 57.739 33.333 0.00 0.00 0.00 2.83
606 616 5.888691 TCTCTGCCGCAATAAATTAAACA 57.111 34.783 0.00 0.00 0.00 2.83
607 617 7.755582 AAATCTCTGCCGCAATAAATTAAAC 57.244 32.000 0.00 0.00 0.00 2.01
608 618 9.462174 CATAAATCTCTGCCGCAATAAATTAAA 57.538 29.630 0.00 0.00 0.00 1.52
609 619 8.081633 CCATAAATCTCTGCCGCAATAAATTAA 58.918 33.333 0.00 0.00 0.00 1.40
610 620 7.446931 TCCATAAATCTCTGCCGCAATAAATTA 59.553 33.333 0.00 0.00 0.00 1.40
611 621 6.265196 TCCATAAATCTCTGCCGCAATAAATT 59.735 34.615 0.00 0.00 0.00 1.82
612 622 5.769662 TCCATAAATCTCTGCCGCAATAAAT 59.230 36.000 0.00 0.00 0.00 1.40
613 623 5.129634 TCCATAAATCTCTGCCGCAATAAA 58.870 37.500 0.00 0.00 0.00 1.40
614 624 4.713553 TCCATAAATCTCTGCCGCAATAA 58.286 39.130 0.00 0.00 0.00 1.40
615 625 4.350368 TCCATAAATCTCTGCCGCAATA 57.650 40.909 0.00 0.00 0.00 1.90
616 626 3.213206 TCCATAAATCTCTGCCGCAAT 57.787 42.857 0.00 0.00 0.00 3.56
617 627 2.708216 TCCATAAATCTCTGCCGCAA 57.292 45.000 0.00 0.00 0.00 4.85
618 628 2.170397 TCTTCCATAAATCTCTGCCGCA 59.830 45.455 0.00 0.00 0.00 5.69
619 629 2.838736 TCTTCCATAAATCTCTGCCGC 58.161 47.619 0.00 0.00 0.00 6.53
620 630 5.818136 TTTTCTTCCATAAATCTCTGCCG 57.182 39.130 0.00 0.00 0.00 5.69
658 668 9.676129 TCCTCTCCTCCAGTTAATTCTATTAAT 57.324 33.333 0.00 0.00 0.00 1.40
659 669 9.676129 ATCCTCTCCTCCAGTTAATTCTATTAA 57.324 33.333 0.00 0.00 0.00 1.40
661 671 9.851267 ATATCCTCTCCTCCAGTTAATTCTATT 57.149 33.333 0.00 0.00 0.00 1.73
662 672 9.265862 CATATCCTCTCCTCCAGTTAATTCTAT 57.734 37.037 0.00 0.00 0.00 1.98
663 673 7.676043 CCATATCCTCTCCTCCAGTTAATTCTA 59.324 40.741 0.00 0.00 0.00 2.10
664 674 6.500049 CCATATCCTCTCCTCCAGTTAATTCT 59.500 42.308 0.00 0.00 0.00 2.40
665 675 6.498651 TCCATATCCTCTCCTCCAGTTAATTC 59.501 42.308 0.00 0.00 0.00 2.17
666 676 6.393897 TCCATATCCTCTCCTCCAGTTAATT 58.606 40.000 0.00 0.00 0.00 1.40
667 677 5.982391 TCCATATCCTCTCCTCCAGTTAAT 58.018 41.667 0.00 0.00 0.00 1.40
668 678 5.418692 TCCATATCCTCTCCTCCAGTTAA 57.581 43.478 0.00 0.00 0.00 2.01
669 679 5.584913 GATCCATATCCTCTCCTCCAGTTA 58.415 45.833 0.00 0.00 0.00 2.24
670 680 4.424842 GATCCATATCCTCTCCTCCAGTT 58.575 47.826 0.00 0.00 0.00 3.16
671 681 3.563261 CGATCCATATCCTCTCCTCCAGT 60.563 52.174 0.00 0.00 0.00 4.00
672 682 3.023119 CGATCCATATCCTCTCCTCCAG 58.977 54.545 0.00 0.00 0.00 3.86
673 683 2.649816 TCGATCCATATCCTCTCCTCCA 59.350 50.000 0.00 0.00 0.00 3.86
674 684 3.287222 CTCGATCCATATCCTCTCCTCC 58.713 54.545 0.00 0.00 0.00 4.30
675 685 2.687935 GCTCGATCCATATCCTCTCCTC 59.312 54.545 0.00 0.00 0.00 3.71
676 686 2.733956 GCTCGATCCATATCCTCTCCT 58.266 52.381 0.00 0.00 0.00 3.69
677 687 1.403679 CGCTCGATCCATATCCTCTCC 59.596 57.143 0.00 0.00 0.00 3.71
678 688 2.088423 ACGCTCGATCCATATCCTCTC 58.912 52.381 0.00 0.00 0.00 3.20
679 689 2.208132 ACGCTCGATCCATATCCTCT 57.792 50.000 0.00 0.00 0.00 3.69
680 690 2.600731 CAACGCTCGATCCATATCCTC 58.399 52.381 0.00 0.00 0.00 3.71
681 691 1.337260 GCAACGCTCGATCCATATCCT 60.337 52.381 0.00 0.00 0.00 3.24
682 692 1.071605 GCAACGCTCGATCCATATCC 58.928 55.000 0.00 0.00 0.00 2.59
683 693 1.783284 TGCAACGCTCGATCCATATC 58.217 50.000 0.00 0.00 0.00 1.63
684 694 1.867233 GTTGCAACGCTCGATCCATAT 59.133 47.619 14.90 0.00 0.00 1.78
685 695 1.286501 GTTGCAACGCTCGATCCATA 58.713 50.000 14.90 0.00 0.00 2.74
686 696 1.695893 CGTTGCAACGCTCGATCCAT 61.696 55.000 35.89 0.00 46.06 3.41
687 697 2.379634 CGTTGCAACGCTCGATCCA 61.380 57.895 35.89 0.00 46.06 3.41
688 698 2.395690 CGTTGCAACGCTCGATCC 59.604 61.111 35.89 3.35 46.06 3.36
697 707 4.811761 GCGGGCGATCGTTGCAAC 62.812 66.667 19.89 19.89 0.00 4.17
700 710 4.096558 TTTGCGGGCGATCGTTGC 62.097 61.111 17.81 17.61 0.00 4.17
701 711 2.098298 CTTTGCGGGCGATCGTTG 59.902 61.111 17.81 7.94 0.00 4.10
702 712 3.124921 CCTTTGCGGGCGATCGTT 61.125 61.111 17.81 0.00 0.00 3.85
703 713 4.077184 TCCTTTGCGGGCGATCGT 62.077 61.111 17.81 0.00 0.00 3.73
704 714 3.264897 CTCCTTTGCGGGCGATCG 61.265 66.667 11.69 11.69 0.00 3.69
705 715 3.577313 GCTCCTTTGCGGGCGATC 61.577 66.667 0.00 0.00 0.00 3.69
719 729 2.666994 CCGTTTCTAAAGGAGAACGCTC 59.333 50.000 2.29 0.00 44.12 5.03
720 730 2.298163 TCCGTTTCTAAAGGAGAACGCT 59.702 45.455 2.29 0.00 44.12 5.07
721 731 2.680577 TCCGTTTCTAAAGGAGAACGC 58.319 47.619 2.29 0.00 44.12 4.84
727 737 2.898662 ACTCCCTCCGTTTCTAAAGGA 58.101 47.619 0.00 0.00 0.00 3.36
728 738 4.021916 TCTACTCCCTCCGTTTCTAAAGG 58.978 47.826 0.00 0.00 0.00 3.11
729 739 5.855740 ATCTACTCCCTCCGTTTCTAAAG 57.144 43.478 0.00 0.00 0.00 1.85
730 740 7.722949 TTAATCTACTCCCTCCGTTTCTAAA 57.277 36.000 0.00 0.00 0.00 1.85
731 741 7.722949 TTTAATCTACTCCCTCCGTTTCTAA 57.277 36.000 0.00 0.00 0.00 2.10
732 742 7.722949 TTTTAATCTACTCCCTCCGTTTCTA 57.277 36.000 0.00 0.00 0.00 2.10
733 743 6.616237 TTTTAATCTACTCCCTCCGTTTCT 57.384 37.500 0.00 0.00 0.00 2.52
782 792 0.235926 GAACAACACTTGGCGCTCTC 59.764 55.000 7.64 0.00 34.12 3.20
852 862 7.628366 GCTGGGATCGAAATCTGATTTGTTTTA 60.628 37.037 19.59 2.00 31.47 1.52
877 887 3.125573 GCGAAGGTCGGGGAAAGC 61.126 66.667 0.00 0.00 40.84 3.51
888 898 1.087501 GAAAACTAGGGCAGCGAAGG 58.912 55.000 0.00 0.00 0.00 3.46
976 1046 4.724697 CGAGGTGCGCGCAAACTG 62.725 66.667 38.24 23.86 0.00 3.16
1297 1369 3.443045 CGCCGCCTTCAGCCAATT 61.443 61.111 0.00 0.00 38.78 2.32
1298 1370 4.408821 TCGCCGCCTTCAGCCAAT 62.409 61.111 0.00 0.00 38.78 3.16
1347 1434 0.756815 GGCAATCCCAATCTCCCCAC 60.757 60.000 0.00 0.00 0.00 4.61
1392 1479 1.065418 GGCTTCTCGATCCCCTTGAAA 60.065 52.381 0.00 0.00 0.00 2.69
1659 1915 0.446616 GGCTTGTAAGTAACTGCGGC 59.553 55.000 0.00 0.00 31.88 6.53
1741 2162 4.111016 CATGTGTGGCTGCGGCTG 62.111 66.667 18.85 2.19 38.73 4.85
1742 2163 2.256072 TATCATGTGTGGCTGCGGCT 62.256 55.000 18.85 0.00 38.73 5.52
2175 2810 6.365970 AGGTTGCCTATATGATCGAGATTT 57.634 37.500 0.00 0.00 28.47 2.17
2340 2982 6.382282 TGAGAGTGACATGGACTGAAGATAAT 59.618 38.462 4.48 0.00 0.00 1.28
2388 3030 4.724602 GCAGACGCAGCAGACCGA 62.725 66.667 0.00 0.00 38.36 4.69
2396 3038 4.081030 CAACAGCCGCAGACGCAG 62.081 66.667 0.00 0.00 38.40 5.18
2397 3039 2.779951 ATACAACAGCCGCAGACGCA 62.780 55.000 0.00 0.00 38.40 5.24
2398 3040 2.025359 GATACAACAGCCGCAGACGC 62.025 60.000 0.00 0.00 38.22 5.19
2399 3041 0.458543 AGATACAACAGCCGCAGACG 60.459 55.000 0.00 0.00 39.67 4.18
2400 3042 1.002366 CAGATACAACAGCCGCAGAC 58.998 55.000 0.00 0.00 0.00 3.51
2401 3043 0.740868 GCAGATACAACAGCCGCAGA 60.741 55.000 0.00 0.00 0.00 4.26
2402 3044 1.020861 TGCAGATACAACAGCCGCAG 61.021 55.000 0.00 0.00 0.00 5.18
2403 3045 0.392863 ATGCAGATACAACAGCCGCA 60.393 50.000 0.00 0.00 0.00 5.69
2404 3046 0.305922 GATGCAGATACAACAGCCGC 59.694 55.000 0.00 0.00 0.00 6.53
2405 3047 0.940126 GGATGCAGATACAACAGCCG 59.060 55.000 0.00 0.00 29.02 5.52
2406 3048 2.338577 AGGATGCAGATACAACAGCC 57.661 50.000 0.00 0.00 40.18 4.85
2407 3049 4.065321 AGTAGGATGCAGATACAACAGC 57.935 45.455 0.00 0.00 0.00 4.40
2408 3050 5.423015 ACAAGTAGGATGCAGATACAACAG 58.577 41.667 0.00 0.00 0.00 3.16
2409 3051 5.420725 ACAAGTAGGATGCAGATACAACA 57.579 39.130 0.00 0.00 0.00 3.33
2410 3052 8.338259 CAAATACAAGTAGGATGCAGATACAAC 58.662 37.037 0.00 0.00 0.00 3.32
2411 3053 7.012327 GCAAATACAAGTAGGATGCAGATACAA 59.988 37.037 0.00 0.00 32.80 2.41
2412 3054 6.483307 GCAAATACAAGTAGGATGCAGATACA 59.517 38.462 0.00 0.00 32.80 2.29
2413 3055 6.483307 TGCAAATACAAGTAGGATGCAGATAC 59.517 38.462 11.08 0.00 37.40 2.24
2414 3056 6.591001 TGCAAATACAAGTAGGATGCAGATA 58.409 36.000 11.08 0.00 37.40 1.98
2415 3057 5.439721 TGCAAATACAAGTAGGATGCAGAT 58.560 37.500 11.08 0.00 37.40 2.90
2416 3058 4.842574 TGCAAATACAAGTAGGATGCAGA 58.157 39.130 11.08 0.00 37.40 4.26
2417 3059 5.530171 AGATGCAAATACAAGTAGGATGCAG 59.470 40.000 16.76 0.00 44.42 4.41
2418 3060 5.439721 AGATGCAAATACAAGTAGGATGCA 58.560 37.500 15.11 15.11 45.16 3.96
2419 3061 5.762218 AGAGATGCAAATACAAGTAGGATGC 59.238 40.000 0.00 7.37 0.00 3.91
2420 3062 7.281774 ACAAGAGATGCAAATACAAGTAGGATG 59.718 37.037 0.00 0.00 0.00 3.51
2421 3063 7.341805 ACAAGAGATGCAAATACAAGTAGGAT 58.658 34.615 0.00 0.00 0.00 3.24
2422 3064 6.711277 ACAAGAGATGCAAATACAAGTAGGA 58.289 36.000 0.00 0.00 0.00 2.94
2423 3065 6.820656 AGACAAGAGATGCAAATACAAGTAGG 59.179 38.462 0.00 0.00 0.00 3.18
2424 3066 7.763528 AGAGACAAGAGATGCAAATACAAGTAG 59.236 37.037 0.00 0.00 0.00 2.57
2425 3067 7.615403 AGAGACAAGAGATGCAAATACAAGTA 58.385 34.615 0.00 0.00 0.00 2.24
2426 3068 6.471146 AGAGACAAGAGATGCAAATACAAGT 58.529 36.000 0.00 0.00 0.00 3.16
2427 3069 6.981762 AGAGACAAGAGATGCAAATACAAG 57.018 37.500 0.00 0.00 0.00 3.16
2428 3070 9.102757 GAATAGAGACAAGAGATGCAAATACAA 57.897 33.333 0.00 0.00 0.00 2.41
2429 3071 7.436376 CGAATAGAGACAAGAGATGCAAATACA 59.564 37.037 0.00 0.00 0.00 2.29
2430 3072 7.649705 TCGAATAGAGACAAGAGATGCAAATAC 59.350 37.037 0.00 0.00 0.00 1.89
2431 3073 7.716612 TCGAATAGAGACAAGAGATGCAAATA 58.283 34.615 0.00 0.00 0.00 1.40
2432 3074 6.577103 TCGAATAGAGACAAGAGATGCAAAT 58.423 36.000 0.00 0.00 0.00 2.32
2433 3075 5.965922 TCGAATAGAGACAAGAGATGCAAA 58.034 37.500 0.00 0.00 0.00 3.68
2434 3076 5.582689 TCGAATAGAGACAAGAGATGCAA 57.417 39.130 0.00 0.00 0.00 4.08
2435 3077 5.582689 TTCGAATAGAGACAAGAGATGCA 57.417 39.130 0.00 0.00 0.00 3.96
2436 3078 6.212235 TCATTCGAATAGAGACAAGAGATGC 58.788 40.000 10.97 0.00 0.00 3.91
2437 3079 8.815141 ATTCATTCGAATAGAGACAAGAGATG 57.185 34.615 10.97 0.00 40.16 2.90
2438 3080 9.829507 AAATTCATTCGAATAGAGACAAGAGAT 57.170 29.630 10.97 0.00 41.12 2.75
2439 3081 9.307121 GAAATTCATTCGAATAGAGACAAGAGA 57.693 33.333 10.97 0.00 41.12 3.10
2440 3082 8.547069 GGAAATTCATTCGAATAGAGACAAGAG 58.453 37.037 10.97 0.00 41.12 2.85
2441 3083 8.040727 TGGAAATTCATTCGAATAGAGACAAGA 58.959 33.333 10.97 0.00 41.12 3.02
2442 3084 8.201554 TGGAAATTCATTCGAATAGAGACAAG 57.798 34.615 10.97 0.00 41.12 3.16
2443 3085 7.824289 ACTGGAAATTCATTCGAATAGAGACAA 59.176 33.333 10.97 0.00 41.12 3.18
2444 3086 7.331026 ACTGGAAATTCATTCGAATAGAGACA 58.669 34.615 10.97 4.00 41.12 3.41
2445 3087 7.708752 AGACTGGAAATTCATTCGAATAGAGAC 59.291 37.037 10.97 1.59 41.12 3.36
2446 3088 7.786030 AGACTGGAAATTCATTCGAATAGAGA 58.214 34.615 10.97 1.12 41.12 3.10
2447 3089 8.430801 AAGACTGGAAATTCATTCGAATAGAG 57.569 34.615 10.97 0.00 41.12 2.43
2448 3090 9.314321 GTAAGACTGGAAATTCATTCGAATAGA 57.686 33.333 10.97 8.14 41.12 1.98
2449 3091 9.098355 TGTAAGACTGGAAATTCATTCGAATAG 57.902 33.333 10.97 4.58 41.12 1.73
2450 3092 9.613428 ATGTAAGACTGGAAATTCATTCGAATA 57.387 29.630 10.97 0.00 41.12 1.75
2451 3093 7.921786 TGTAAGACTGGAAATTCATTCGAAT 57.078 32.000 4.39 4.39 43.94 3.34
2452 3094 7.921786 ATGTAAGACTGGAAATTCATTCGAA 57.078 32.000 0.00 0.00 39.05 3.71
2818 3573 1.839191 AGCTTGGTTGAGGTGCTGA 59.161 52.632 0.00 0.00 32.32 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.