Multiple sequence alignment - TraesCS3D01G171200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G171200 chr3D 100.000 4929 0 0 1 4929 151436492 151441420 0.000000e+00 9103.0
1 TraesCS3D01G171200 chr3D 90.960 177 14 2 4662 4837 18703005 18703180 2.290000e-58 237.0
2 TraesCS3D01G171200 chr3D 97.368 38 1 0 1644 1681 429303004 429303041 1.150000e-06 65.8
3 TraesCS3D01G171200 chr3B 94.589 1848 82 6 2584 4430 222247153 222248983 0.000000e+00 2843.0
4 TraesCS3D01G171200 chr3B 87.338 1698 125 42 928 2584 222245475 222247123 0.000000e+00 1862.0
5 TraesCS3D01G171200 chr3B 91.640 945 39 14 11 921 222244500 222245438 0.000000e+00 1271.0
6 TraesCS3D01G171200 chr3B 87.398 246 22 7 4663 4902 572674752 572674510 1.750000e-69 274.0
7 TraesCS3D01G171200 chr3B 90.960 177 14 2 4662 4837 808892762 808892587 2.290000e-58 237.0
8 TraesCS3D01G171200 chr3B 95.935 123 4 1 4453 4574 222248974 222249096 1.080000e-46 198.0
9 TraesCS3D01G171200 chr3B 95.775 71 3 0 4594 4664 222249082 222249152 1.120000e-21 115.0
10 TraesCS3D01G171200 chr3B 89.796 49 5 0 4838 4886 775490981 775490933 4.120000e-06 63.9
11 TraesCS3D01G171200 chr3A 87.741 2382 180 60 275 2584 179538755 179536414 0.000000e+00 2678.0
12 TraesCS3D01G171200 chr3A 92.649 1850 82 18 2584 4430 179536384 179534586 0.000000e+00 2614.0
13 TraesCS3D01G171200 chr3A 95.902 122 5 0 4453 4574 179534595 179534474 1.080000e-46 198.0
14 TraesCS3D01G171200 chr3A 94.366 71 4 0 4594 4664 179534488 179534418 5.220000e-20 110.0
15 TraesCS3D01G171200 chr1B 81.903 746 86 35 1851 2560 602238771 602239503 7.110000e-163 584.0
16 TraesCS3D01G171200 chr1B 90.987 233 21 0 1851 2083 66928310 66928542 1.030000e-81 315.0
17 TraesCS3D01G171200 chr1B 84.416 231 28 8 4676 4902 521004046 521003820 2.310000e-53 220.0
18 TraesCS3D01G171200 chr1B 94.340 53 1 1 2323 2373 66929104 66929156 4.090000e-11 80.5
19 TraesCS3D01G171200 chr1B 97.368 38 1 0 1644 1681 327570802 327570839 1.150000e-06 65.8
20 TraesCS3D01G171200 chr1B 100.000 34 0 0 2243 2276 66929113 66929146 4.120000e-06 63.9
21 TraesCS3D01G171200 chr1B 100.000 31 0 0 2243 2273 602239262 602239292 1.920000e-04 58.4
22 TraesCS3D01G171200 chr6B 81.681 464 74 10 1362 1821 434184514 434184970 4.660000e-100 375.0
23 TraesCS3D01G171200 chr6B 96.875 32 1 0 2070 2101 289338451 289338482 2.000000e-03 54.7
24 TraesCS3D01G171200 chr6A 81.545 466 71 13 1362 1821 389758286 389758742 2.170000e-98 370.0
25 TraesCS3D01G171200 chr7A 92.045 176 12 2 4663 4837 43179730 43179904 3.810000e-61 246.0
26 TraesCS3D01G171200 chr7A 86.264 182 15 3 1908 2089 165443491 165443320 6.510000e-44 189.0
27 TraesCS3D01G171200 chr7B 91.477 176 13 2 4663 4837 634277384 634277210 1.770000e-59 241.0
28 TraesCS3D01G171200 chr7B 84.746 236 28 5 4663 4896 58727056 58727285 3.840000e-56 230.0
29 TraesCS3D01G171200 chr7B 89.474 57 5 1 4840 4896 36573059 36573004 2.460000e-08 71.3
30 TraesCS3D01G171200 chr5A 91.011 178 14 2 4661 4837 146528215 146528391 6.380000e-59 239.0
31 TraesCS3D01G171200 chr1A 90.503 179 15 2 4661 4837 127830881 127830703 8.250000e-58 235.0
32 TraesCS3D01G171200 chr1A 90.625 64 6 0 4838 4901 578812050 578811987 8.790000e-13 86.1
33 TraesCS3D01G171200 chr2A 80.597 134 24 2 49 181 1593058 1593190 8.730000e-18 102.0
34 TraesCS3D01G171200 chr7D 97.368 38 1 0 1644 1681 619809261 619809298 1.150000e-06 65.8
35 TraesCS3D01G171200 chr7D 100.000 29 0 0 2073 2101 18551848 18551876 2.000000e-03 54.7
36 TraesCS3D01G171200 chr1D 97.059 34 1 0 2072 2105 493766401 493766434 1.920000e-04 58.4
37 TraesCS3D01G171200 chr1D 100.000 29 0 0 2073 2101 441743449 441743477 2.000000e-03 54.7
38 TraesCS3D01G171200 chr6D 94.286 35 2 0 2073 2107 21011665 21011631 2.000000e-03 54.7
39 TraesCS3D01G171200 chr4B 96.875 32 1 0 2070 2101 201909534 201909565 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G171200 chr3D 151436492 151441420 4928 False 9103.0 9103 100.0000 1 4929 1 chr3D.!!$F2 4928
1 TraesCS3D01G171200 chr3B 222244500 222249152 4652 False 1257.8 2843 93.0554 11 4664 5 chr3B.!!$F1 4653
2 TraesCS3D01G171200 chr3A 179534418 179538755 4337 True 1400.0 2678 92.6645 275 4664 4 chr3A.!!$R1 4389
3 TraesCS3D01G171200 chr1B 602238771 602239503 732 False 321.2 584 90.9515 1851 2560 2 chr1B.!!$F3 709


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 292 0.039165 CCCTTTTCAGCCGTTGAAGC 60.039 55.0 0.0 0.0 46.01 3.86 F
924 965 0.107214 CGACCTGCCTCTCTCTCTCT 60.107 60.0 0.0 0.0 0.00 3.10 F
2095 2193 0.168568 GCTTCTGCTTCTGCTTCTGC 59.831 55.0 0.0 0.0 40.48 4.26 F
2269 2376 0.174845 CATTCAACATGCCAGCCAGG 59.825 55.0 0.0 0.0 41.84 4.45 F
3526 3725 0.533085 GCAGCCCTAAGGAATCGGAC 60.533 60.0 0.0 0.0 33.47 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2250 2357 0.174845 CCTGGCTGGCATGTTGAATG 59.825 55.0 3.74 0.0 0.00 2.67 R
2251 2358 0.251922 ACCTGGCTGGCATGTTGAAT 60.252 50.0 10.71 0.0 40.22 2.57 R
3672 3871 0.036577 AGGCAGTGTGTGATCAGCTC 60.037 55.0 0.00 0.0 0.00 4.09 R
3679 3878 0.036732 GGGATTCAGGCAGTGTGTGA 59.963 55.0 0.00 0.0 0.00 3.58 R
4756 4958 0.035458 CGGCTCAGTCTTTTGGAGGT 59.965 55.0 0.00 0.0 0.00 3.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 8.863872 ACTAATTGTGATTTAGCCAAACTAGT 57.136 30.769 0.00 0.00 30.79 2.57
79 80 7.569240 AGCCAAACTAGTTAGAAGCAAGATAT 58.431 34.615 8.92 0.00 0.00 1.63
83 84 9.155975 CAAACTAGTTAGAAGCAAGATATGTGT 57.844 33.333 8.92 0.00 0.00 3.72
101 102 3.320541 TGTGTGGGGTGAATGAAACATTC 59.679 43.478 14.93 14.93 0.00 2.67
117 119 6.811665 TGAAACATTCACCTATAGAGACGTTG 59.188 38.462 0.00 0.68 34.08 4.10
126 128 5.927689 ACCTATAGAGACGTTGATACTCTCG 59.072 44.000 6.97 0.00 40.70 4.04
137 139 6.312918 ACGTTGATACTCTCGCAAAACATAAT 59.687 34.615 0.00 0.00 0.00 1.28
139 141 7.787935 CGTTGATACTCTCGCAAAACATAATAC 59.212 37.037 0.00 0.00 0.00 1.89
183 185 7.174080 AGAGAGTTCTTTGATGTCTAAAAAGGC 59.826 37.037 0.00 0.00 32.84 4.35
290 292 0.039165 CCCTTTTCAGCCGTTGAAGC 60.039 55.000 0.00 0.00 46.01 3.86
518 525 0.326927 TTCTGGAAACCGGCTAAGGG 59.673 55.000 0.00 0.00 35.02 3.95
772 794 6.866248 TCTTGCCGTAAATCCATTTTTCTTTC 59.134 34.615 0.00 0.00 0.00 2.62
791 827 4.928520 GGGGGAGGGAGGGATGGG 62.929 77.778 0.00 0.00 0.00 4.00
903 944 1.298993 GTCGTCCCCTTTCCCCTTC 59.701 63.158 0.00 0.00 0.00 3.46
921 962 0.678366 TCACGACCTGCCTCTCTCTC 60.678 60.000 0.00 0.00 0.00 3.20
922 963 0.679640 CACGACCTGCCTCTCTCTCT 60.680 60.000 0.00 0.00 0.00 3.10
923 964 0.393808 ACGACCTGCCTCTCTCTCTC 60.394 60.000 0.00 0.00 0.00 3.20
924 965 0.107214 CGACCTGCCTCTCTCTCTCT 60.107 60.000 0.00 0.00 0.00 3.10
925 966 1.681780 CGACCTGCCTCTCTCTCTCTT 60.682 57.143 0.00 0.00 0.00 2.85
926 967 1.750778 GACCTGCCTCTCTCTCTCTTG 59.249 57.143 0.00 0.00 0.00 3.02
979 1050 4.802947 AGAGATGGAGCCTCTGCA 57.197 55.556 0.00 0.00 39.36 4.41
1007 1078 2.036256 AGTTGCTCCCATGGCCAC 59.964 61.111 8.16 0.00 0.00 5.01
1042 1113 1.688772 TGCCCGTATCTCTGAGGTAC 58.311 55.000 16.44 16.44 0.00 3.34
1154 1225 1.133792 ACCCCTTCCATAATTGCTCGG 60.134 52.381 0.00 0.00 0.00 4.63
1171 1243 3.436496 CTCGGACACGGAGTTAATTCTC 58.564 50.000 0.00 0.00 41.61 2.87
1177 1249 5.336531 GGACACGGAGTTAATTCTCTGAAGA 60.337 44.000 9.39 0.00 41.61 2.87
1235 1307 1.852633 AAAATGGCTACTCAAGGGGC 58.147 50.000 0.00 0.00 0.00 5.80
1237 1309 0.929244 AATGGCTACTCAAGGGGCAT 59.071 50.000 7.93 7.93 45.75 4.40
1241 1313 2.298610 GGCTACTCAAGGGGCATTTAC 58.701 52.381 0.00 0.00 0.00 2.01
1253 1325 4.206477 GGGCATTTACTGCTCCAAATTT 57.794 40.909 0.00 0.00 46.40 1.82
1256 1328 7.818961 GGGCATTTACTGCTCCAAATTTGCT 62.819 44.000 12.92 0.00 46.40 3.91
1257 1329 5.773239 CATTTACTGCTCCAAATTTGCTG 57.227 39.130 12.92 8.26 0.00 4.41
1258 1330 4.935352 TTTACTGCTCCAAATTTGCTGT 57.065 36.364 12.92 13.25 40.78 4.40
1259 1331 6.389091 CATTTACTGCTCCAAATTTGCTGTA 58.611 36.000 12.92 12.34 39.11 2.74
1260 1332 5.627499 TTACTGCTCCAAATTTGCTGTAG 57.373 39.130 12.92 16.08 40.36 2.74
1269 1341 7.522236 GCTCCAAATTTGCTGTAGAGTAGTTTT 60.522 37.037 12.92 0.00 0.00 2.43
1274 1346 8.677148 AATTTGCTGTAGAGTAGTTTTTCTCA 57.323 30.769 0.00 0.00 33.63 3.27
1280 1352 8.017946 GCTGTAGAGTAGTTTTTCTCAATTTGG 58.982 37.037 0.00 0.00 33.63 3.28
1281 1353 7.871853 TGTAGAGTAGTTTTTCTCAATTTGGC 58.128 34.615 0.00 0.00 33.63 4.52
1282 1354 7.719633 TGTAGAGTAGTTTTTCTCAATTTGGCT 59.280 33.333 0.00 0.00 33.63 4.75
1283 1355 7.208225 AGAGTAGTTTTTCTCAATTTGGCTC 57.792 36.000 0.00 0.00 33.63 4.70
1286 1358 5.859205 AGTTTTTCTCAATTTGGCTCTGT 57.141 34.783 0.00 0.00 0.00 3.41
1287 1359 6.225981 AGTTTTTCTCAATTTGGCTCTGTT 57.774 33.333 0.00 0.00 0.00 3.16
1288 1360 6.276091 AGTTTTTCTCAATTTGGCTCTGTTC 58.724 36.000 0.00 0.00 0.00 3.18
1297 1389 0.601046 TGGCTCTGTTCAGCTCAACG 60.601 55.000 0.00 0.00 39.58 4.10
1300 1392 1.604185 GCTCTGTTCAGCTCAACGTCT 60.604 52.381 0.00 0.00 36.38 4.18
1314 1406 1.493311 CGTCTTCGTTTCTGCAGGC 59.507 57.895 15.13 3.84 0.00 4.85
1333 1425 1.596203 GGATTAACCGGTAGCGGCC 60.596 63.158 32.09 20.71 0.00 6.13
1749 1841 4.003788 CTGGTGTTCGGCGAGGGT 62.004 66.667 10.46 0.00 0.00 4.34
1836 1928 2.356313 CTCAACGCGGTGCTGTCT 60.356 61.111 21.87 0.00 0.00 3.41
1860 1952 2.344203 CGGAGAAGACGGAGCTGGT 61.344 63.158 0.00 0.00 0.00 4.00
2089 2187 2.082231 TGATTCTGCTTCTGCTTCTGC 58.918 47.619 0.00 0.00 40.48 4.26
2090 2188 2.290134 TGATTCTGCTTCTGCTTCTGCT 60.290 45.455 0.00 0.00 40.48 4.24
2094 2192 1.465387 CTGCTTCTGCTTCTGCTTCTG 59.535 52.381 0.00 0.00 40.48 3.02
2095 2193 0.168568 GCTTCTGCTTCTGCTTCTGC 59.831 55.000 0.00 0.00 40.48 4.26
2096 2194 1.810959 CTTCTGCTTCTGCTTCTGCT 58.189 50.000 0.00 0.00 40.48 4.24
2098 2196 1.805869 TCTGCTTCTGCTTCTGCTTC 58.194 50.000 0.00 0.00 40.48 3.86
2099 2197 1.347050 TCTGCTTCTGCTTCTGCTTCT 59.653 47.619 0.00 0.00 40.48 2.85
2100 2198 1.465387 CTGCTTCTGCTTCTGCTTCTG 59.535 52.381 0.00 0.00 40.48 3.02
2102 2200 2.149578 GCTTCTGCTTCTGCTTCTGAA 58.850 47.619 0.00 0.00 40.48 3.02
2103 2201 2.748532 GCTTCTGCTTCTGCTTCTGAAT 59.251 45.455 0.00 0.00 40.48 2.57
2104 2202 3.181508 GCTTCTGCTTCTGCTTCTGAATC 60.182 47.826 0.00 0.00 40.48 2.52
2105 2203 3.977134 TCTGCTTCTGCTTCTGAATCT 57.023 42.857 0.00 0.00 40.48 2.40
2106 2204 4.283363 TCTGCTTCTGCTTCTGAATCTT 57.717 40.909 0.00 0.00 40.48 2.40
2108 2206 2.486982 TGCTTCTGCTTCTGAATCTTGC 59.513 45.455 0.00 0.00 40.48 4.01
2109 2207 2.159407 GCTTCTGCTTCTGAATCTTGCC 60.159 50.000 0.00 0.00 36.03 4.52
2124 2230 4.038271 TCTTGCCTCAGTTCCATGATTT 57.962 40.909 0.00 0.00 0.00 2.17
2148 2254 5.720371 TTTGGGTCTAATTGATGTGTTGG 57.280 39.130 0.00 0.00 0.00 3.77
2155 2261 6.037610 GGTCTAATTGATGTGTTGGTCTCATC 59.962 42.308 0.00 0.00 43.32 2.92
2158 2264 8.708378 TCTAATTGATGTGTTGGTCTCATCTAT 58.292 33.333 0.00 0.00 43.38 1.98
2159 2265 9.987272 CTAATTGATGTGTTGGTCTCATCTATA 57.013 33.333 0.00 0.00 43.38 1.31
2161 2267 8.843885 ATTGATGTGTTGGTCTCATCTATATG 57.156 34.615 0.00 0.00 43.38 1.78
2228 2334 0.373716 CCAAGCGGCGATGAACTAAC 59.626 55.000 12.98 0.00 0.00 2.34
2234 2341 4.940463 AGCGGCGATGAACTAACTAAATA 58.060 39.130 12.98 0.00 0.00 1.40
2261 2368 5.042593 TCAACTTGTGAACATTCAACATGC 58.957 37.500 0.00 0.00 39.21 4.06
2262 2369 3.981211 ACTTGTGAACATTCAACATGCC 58.019 40.909 0.00 0.00 39.21 4.40
2263 2370 3.384146 ACTTGTGAACATTCAACATGCCA 59.616 39.130 0.00 0.00 39.21 4.92
2265 2372 2.288334 TGTGAACATTCAACATGCCAGC 60.288 45.455 0.00 0.00 39.21 4.85
2266 2373 1.273048 TGAACATTCAACATGCCAGCC 59.727 47.619 0.00 0.00 33.55 4.85
2269 2376 0.174845 CATTCAACATGCCAGCCAGG 59.825 55.000 0.00 0.00 41.84 4.45
2272 2379 3.781760 AACATGCCAGCCAGGTTG 58.218 55.556 0.00 0.00 45.76 3.77
2273 2380 1.152483 AACATGCCAGCCAGGTTGT 60.152 52.632 2.14 0.00 45.76 3.32
2294 2420 6.978343 TGTGAAACCTGAGAATAATAACGG 57.022 37.500 0.00 0.00 34.36 4.44
2303 2429 4.117685 GAGAATAATAACGGCCGTTCTGT 58.882 43.478 44.24 30.78 39.31 3.41
2304 2430 4.510571 AGAATAATAACGGCCGTTCTGTT 58.489 39.130 44.24 34.31 45.69 3.16
2318 2448 4.911610 CCGTTCTGTTTGACATGATTGTTC 59.088 41.667 0.00 0.00 35.79 3.18
2321 2451 5.694231 TCTGTTTGACATGATTGTTCCTG 57.306 39.130 0.00 0.00 35.79 3.86
2434 2584 8.060931 TGCTTTAATTATTGTAATGGTGCTCA 57.939 30.769 0.00 0.00 0.00 4.26
2473 2623 6.512415 GCAGTTAGTTCATGATATTGCCTGTC 60.512 42.308 0.00 0.00 0.00 3.51
2478 2628 7.313740 AGTTCATGATATTGCCTGTCTCTAT 57.686 36.000 0.00 0.00 0.00 1.98
2487 2638 5.484173 TTGCCTGTCTCTATAAAAATGCG 57.516 39.130 0.00 0.00 0.00 4.73
2490 2641 6.288294 TGCCTGTCTCTATAAAAATGCGTAT 58.712 36.000 0.00 0.00 0.00 3.06
2524 2684 7.333528 TCTCATGCTTGTGGGAATTATTTAC 57.666 36.000 0.00 0.00 0.00 2.01
2528 2688 6.509418 TGCTTGTGGGAATTATTTACTGTC 57.491 37.500 0.00 0.00 0.00 3.51
2648 2847 9.919416 TTCATTTCTCATGAACCTATTAATGGA 57.081 29.630 0.00 0.00 33.55 3.41
2671 2870 0.753479 TTTTTCCAGCAACTGCCGGA 60.753 50.000 5.05 2.40 45.22 5.14
2686 2885 1.556564 CCGGATGCAGTACTAACACG 58.443 55.000 0.00 0.00 0.00 4.49
2701 2900 2.150397 ACACGTTCTTACTGCAGGTC 57.850 50.000 19.93 0.67 0.00 3.85
2719 2918 4.800993 CAGGTCGTGAAGTATCTGATTGTC 59.199 45.833 0.00 0.00 0.00 3.18
2722 2921 3.128764 TCGTGAAGTATCTGATTGTCGCT 59.871 43.478 0.00 0.00 0.00 4.93
2899 3098 2.298729 ACTGACTGGCTTCAGAACTCTC 59.701 50.000 19.49 0.00 45.19 3.20
3073 3272 2.981302 CTCCTGATGACCGTGCCA 59.019 61.111 0.00 0.00 0.00 4.92
3082 3281 1.226859 GACCGTGCCATCGATCGAA 60.227 57.895 23.50 1.83 0.00 3.71
3094 3293 1.730593 CGATCGAACTGAACGTCCGC 61.731 60.000 10.26 0.00 38.01 5.54
3115 3314 1.376424 CAGCAACGGCATGACTCCT 60.376 57.895 0.00 0.00 44.61 3.69
3235 3434 2.044946 AGGTCCGCCATTGCTTCC 60.045 61.111 0.00 0.00 37.19 3.46
3238 3437 1.976474 GTCCGCCATTGCTTCCCAA 60.976 57.895 0.00 0.00 37.94 4.12
3283 3482 1.838073 GCCCGGGGACTTCTTTCAGA 61.838 60.000 25.28 0.00 0.00 3.27
3382 3581 4.156922 AGAACGACCTCATTCTCTAGTGTG 59.843 45.833 0.00 0.00 28.79 3.82
3503 3702 1.821216 TCGCAAGGGGAAGAAATCAC 58.179 50.000 0.00 0.00 38.47 3.06
3514 3713 3.645268 GAAATCACCCGGCAGCCCT 62.645 63.158 5.63 0.00 0.00 5.19
3526 3725 0.533085 GCAGCCCTAAGGAATCGGAC 60.533 60.000 0.00 0.00 33.47 4.79
3550 3749 2.506472 GCCTCCTCGGTGGATTCC 59.494 66.667 8.19 0.00 45.16 3.01
3590 3789 4.928140 AGACCACCCCGACACCGT 62.928 66.667 0.00 0.00 0.00 4.83
3672 3871 4.135306 CCATCAATGAAGATGAGGTCTGG 58.865 47.826 5.57 0.00 46.51 3.86
3679 3878 2.475339 AGATGAGGTCTGGAGCTGAT 57.525 50.000 7.05 4.29 39.57 2.90
3697 3896 2.012673 GATCACACACTGCCTGAATCC 58.987 52.381 0.00 0.00 0.00 3.01
3705 3904 2.517166 GCCTGAATCCCCTTCGGC 60.517 66.667 0.00 0.00 42.23 5.54
3832 4031 8.057623 ACACCAAAGAAATATGGATCTCTGAAT 58.942 33.333 0.00 0.00 39.12 2.57
3856 4055 8.694581 ATAGTAGACTTATGAACCAGTACCTC 57.305 38.462 0.00 0.00 0.00 3.85
3875 4074 2.505557 GCACTGGAGCGCAATTGC 60.506 61.111 20.76 20.76 37.78 3.56
3876 4075 2.956194 CACTGGAGCGCAATTGCA 59.044 55.556 28.77 9.14 42.21 4.08
3968 4167 1.608590 CCACTCAAATTTGACACCGCT 59.391 47.619 16.91 0.00 32.90 5.52
3978 4177 0.106918 TGACACCGCTTGTTTCCCTT 60.107 50.000 0.00 0.00 39.17 3.95
4031 4230 0.315568 AGCACCAGACAGACGACTTC 59.684 55.000 0.00 0.00 0.00 3.01
4032 4231 0.032130 GCACCAGACAGACGACTTCA 59.968 55.000 0.00 0.00 0.00 3.02
4033 4232 1.538204 GCACCAGACAGACGACTTCAA 60.538 52.381 0.00 0.00 0.00 2.69
4034 4233 2.868044 GCACCAGACAGACGACTTCAAT 60.868 50.000 0.00 0.00 0.00 2.57
4035 4234 2.989840 CACCAGACAGACGACTTCAATC 59.010 50.000 0.00 0.00 0.00 2.67
4036 4235 2.628178 ACCAGACAGACGACTTCAATCA 59.372 45.455 0.00 0.00 0.00 2.57
4142 4341 3.439129 GGTTACCATGTTAGTGTGCCTTC 59.561 47.826 0.00 0.00 0.00 3.46
4294 4493 0.970427 TAGTGCTCACCTCCGCATCA 60.970 55.000 0.00 0.00 38.56 3.07
4327 4526 8.065036 ATGTCTACATGAAGGTGCAGATTTGC 62.065 42.308 0.00 0.24 42.00 3.68
4340 4539 3.795101 GCAGATTTGCCAATCATTCTTCG 59.205 43.478 12.62 0.00 44.74 3.79
4430 4631 0.391661 TCGGCCACTCTTTCTCATGC 60.392 55.000 2.24 0.00 0.00 4.06
4431 4632 1.699656 CGGCCACTCTTTCTCATGCG 61.700 60.000 2.24 0.00 0.00 4.73
4432 4633 1.372087 GGCCACTCTTTCTCATGCGG 61.372 60.000 0.00 0.00 0.00 5.69
4433 4634 1.986575 GCCACTCTTTCTCATGCGGC 61.987 60.000 0.00 0.00 0.00 6.53
4434 4635 0.392193 CCACTCTTTCTCATGCGGCT 60.392 55.000 0.00 0.00 0.00 5.52
4435 4636 1.446907 CACTCTTTCTCATGCGGCTT 58.553 50.000 0.00 0.00 0.00 4.35
4436 4637 1.808945 CACTCTTTCTCATGCGGCTTT 59.191 47.619 0.00 0.00 0.00 3.51
4437 4638 1.808945 ACTCTTTCTCATGCGGCTTTG 59.191 47.619 0.00 0.00 0.00 2.77
4438 4639 0.523072 TCTTTCTCATGCGGCTTTGC 59.477 50.000 0.00 0.00 0.00 3.68
4439 4640 0.524862 CTTTCTCATGCGGCTTTGCT 59.475 50.000 0.00 0.00 35.36 3.91
4440 4641 1.739466 CTTTCTCATGCGGCTTTGCTA 59.261 47.619 0.00 0.00 35.36 3.49
4441 4642 1.086696 TTCTCATGCGGCTTTGCTAC 58.913 50.000 0.00 0.00 35.36 3.58
4442 4643 0.036483 TCTCATGCGGCTTTGCTACA 60.036 50.000 0.00 0.00 35.36 2.74
4443 4644 1.019673 CTCATGCGGCTTTGCTACAT 58.980 50.000 0.00 0.00 35.36 2.29
4444 4645 1.003116 CTCATGCGGCTTTGCTACATC 60.003 52.381 0.00 0.00 35.36 3.06
4445 4646 0.734309 CATGCGGCTTTGCTACATCA 59.266 50.000 0.00 0.00 35.36 3.07
4446 4647 1.335810 CATGCGGCTTTGCTACATCAT 59.664 47.619 0.00 0.00 35.36 2.45
4447 4648 1.462616 TGCGGCTTTGCTACATCATT 58.537 45.000 0.00 0.00 35.36 2.57
4448 4649 1.818060 TGCGGCTTTGCTACATCATTT 59.182 42.857 0.00 0.00 35.36 2.32
4449 4650 2.230992 TGCGGCTTTGCTACATCATTTT 59.769 40.909 0.00 0.00 35.36 1.82
4450 4651 3.253230 GCGGCTTTGCTACATCATTTTT 58.747 40.909 0.00 0.00 0.00 1.94
4451 4652 3.061161 GCGGCTTTGCTACATCATTTTTG 59.939 43.478 0.00 0.00 0.00 2.44
4452 4653 3.061161 CGGCTTTGCTACATCATTTTTGC 59.939 43.478 0.00 0.00 0.00 3.68
4453 4654 4.248058 GGCTTTGCTACATCATTTTTGCT 58.752 39.130 0.00 0.00 0.00 3.91
4454 4655 4.692155 GGCTTTGCTACATCATTTTTGCTT 59.308 37.500 0.00 0.00 0.00 3.91
4455 4656 5.179929 GGCTTTGCTACATCATTTTTGCTTT 59.820 36.000 0.00 0.00 0.00 3.51
4456 4657 6.301861 GCTTTGCTACATCATTTTTGCTTTC 58.698 36.000 0.00 0.00 0.00 2.62
4457 4658 6.146673 GCTTTGCTACATCATTTTTGCTTTCT 59.853 34.615 0.00 0.00 0.00 2.52
4458 4659 7.620806 GCTTTGCTACATCATTTTTGCTTTCTC 60.621 37.037 0.00 0.00 0.00 2.87
4459 4660 6.330004 TGCTACATCATTTTTGCTTTCTCA 57.670 33.333 0.00 0.00 0.00 3.27
4460 4661 6.927416 TGCTACATCATTTTTGCTTTCTCAT 58.073 32.000 0.00 0.00 0.00 2.90
4461 4662 6.809689 TGCTACATCATTTTTGCTTTCTCATG 59.190 34.615 0.00 0.00 0.00 3.07
4558 4760 9.620259 GAGAAGATGTATCTTTTTAGGGTCAAT 57.380 33.333 8.41 0.00 46.47 2.57
4559 4761 9.981460 AGAAGATGTATCTTTTTAGGGTCAATT 57.019 29.630 8.41 0.00 46.47 2.32
4562 4764 9.628500 AGATGTATCTTTTTAGGGTCAATTACC 57.372 33.333 0.00 0.00 40.00 2.85
4578 4780 8.494236 GTCAATTACCAATATCTTGATTTCGC 57.506 34.615 0.00 0.00 34.04 4.70
4579 4781 8.128582 GTCAATTACCAATATCTTGATTTCGCA 58.871 33.333 0.00 0.00 34.04 5.10
4580 4782 8.681806 TCAATTACCAATATCTTGATTTCGCAA 58.318 29.630 0.00 0.00 34.04 4.85
4581 4783 9.299963 CAATTACCAATATCTTGATTTCGCAAA 57.700 29.630 0.00 0.00 34.04 3.68
4582 4784 9.868277 AATTACCAATATCTTGATTTCGCAAAA 57.132 25.926 0.00 0.00 34.04 2.44
4583 4785 9.868277 ATTACCAATATCTTGATTTCGCAAAAA 57.132 25.926 0.00 0.00 34.04 1.94
4649 4851 0.725117 CCGTTTTGTAGATCGGTGGC 59.275 55.000 0.00 0.00 38.45 5.01
4664 4866 1.608918 TGGCGGTGGGATGCATTTT 60.609 52.632 0.00 0.00 0.00 1.82
4665 4867 1.190833 TGGCGGTGGGATGCATTTTT 61.191 50.000 0.00 0.00 0.00 1.94
4666 4868 0.820871 GGCGGTGGGATGCATTTTTA 59.179 50.000 0.00 0.00 0.00 1.52
4667 4869 1.412343 GGCGGTGGGATGCATTTTTAT 59.588 47.619 0.00 0.00 0.00 1.40
4668 4870 2.158971 GGCGGTGGGATGCATTTTTATT 60.159 45.455 0.00 0.00 0.00 1.40
4669 4871 3.530535 GCGGTGGGATGCATTTTTATTT 58.469 40.909 0.00 0.00 0.00 1.40
4670 4872 3.938334 GCGGTGGGATGCATTTTTATTTT 59.062 39.130 0.00 0.00 0.00 1.82
4671 4873 5.112686 GCGGTGGGATGCATTTTTATTTTA 58.887 37.500 0.00 0.00 0.00 1.52
4672 4874 5.582665 GCGGTGGGATGCATTTTTATTTTAA 59.417 36.000 0.00 0.00 0.00 1.52
4673 4875 6.456315 GCGGTGGGATGCATTTTTATTTTAAC 60.456 38.462 0.00 0.00 0.00 2.01
4674 4876 6.591834 CGGTGGGATGCATTTTTATTTTAACA 59.408 34.615 0.00 0.00 0.00 2.41
4675 4877 7.279758 CGGTGGGATGCATTTTTATTTTAACAT 59.720 33.333 0.00 0.00 0.00 2.71
4676 4878 9.606631 GGTGGGATGCATTTTTATTTTAACATA 57.393 29.630 0.00 0.00 0.00 2.29
4692 4894 6.699895 TTAACATAAGTACAGACACAAGCG 57.300 37.500 0.00 0.00 0.00 4.68
4693 4895 2.993899 ACATAAGTACAGACACAAGCGC 59.006 45.455 0.00 0.00 0.00 5.92
4694 4896 2.074547 TAAGTACAGACACAAGCGCC 57.925 50.000 2.29 0.00 0.00 6.53
4695 4897 0.105964 AAGTACAGACACAAGCGCCA 59.894 50.000 2.29 0.00 0.00 5.69
4696 4898 0.321671 AGTACAGACACAAGCGCCAT 59.678 50.000 2.29 0.00 0.00 4.40
4697 4899 1.548719 AGTACAGACACAAGCGCCATA 59.451 47.619 2.29 0.00 0.00 2.74
4698 4900 2.168521 AGTACAGACACAAGCGCCATAT 59.831 45.455 2.29 0.00 0.00 1.78
4699 4901 2.979814 ACAGACACAAGCGCCATATA 57.020 45.000 2.29 0.00 0.00 0.86
4700 4902 2.550978 ACAGACACAAGCGCCATATAC 58.449 47.619 2.29 0.00 0.00 1.47
4701 4903 2.093711 ACAGACACAAGCGCCATATACA 60.094 45.455 2.29 0.00 0.00 2.29
4702 4904 2.285220 CAGACACAAGCGCCATATACAC 59.715 50.000 2.29 0.00 0.00 2.90
4703 4905 1.257936 GACACAAGCGCCATATACACG 59.742 52.381 2.29 0.00 0.00 4.49
4711 4913 2.853963 CGCCATATACACGCGTATACA 58.146 47.619 13.44 0.00 42.10 2.29
4712 4914 2.591148 CGCCATATACACGCGTATACAC 59.409 50.000 13.44 0.00 42.10 2.90
4713 4915 3.668757 CGCCATATACACGCGTATACACT 60.669 47.826 13.44 0.00 42.10 3.55
4714 4916 3.850273 GCCATATACACGCGTATACACTC 59.150 47.826 13.44 0.00 42.10 3.51
4715 4917 4.614306 GCCATATACACGCGTATACACTCA 60.614 45.833 13.44 0.00 42.10 3.41
4716 4918 4.849926 CCATATACACGCGTATACACTCAC 59.150 45.833 13.44 0.00 42.10 3.51
4717 4919 2.830772 TACACGCGTATACACTCACC 57.169 50.000 13.44 0.00 0.00 4.02
4718 4920 0.171903 ACACGCGTATACACTCACCC 59.828 55.000 13.44 0.00 0.00 4.61
4719 4921 0.526954 CACGCGTATACACTCACCCC 60.527 60.000 13.44 0.00 0.00 4.95
4720 4922 0.682209 ACGCGTATACACTCACCCCT 60.682 55.000 11.67 0.00 0.00 4.79
4721 4923 1.311859 CGCGTATACACTCACCCCTA 58.688 55.000 0.00 0.00 0.00 3.53
4722 4924 1.884579 CGCGTATACACTCACCCCTAT 59.115 52.381 0.00 0.00 0.00 2.57
4723 4925 2.351447 CGCGTATACACTCACCCCTATG 60.351 54.545 0.00 0.00 0.00 2.23
4724 4926 2.889045 GCGTATACACTCACCCCTATGA 59.111 50.000 3.32 0.00 0.00 2.15
4725 4927 3.319972 GCGTATACACTCACCCCTATGAA 59.680 47.826 3.32 0.00 0.00 2.57
4726 4928 4.021368 GCGTATACACTCACCCCTATGAAT 60.021 45.833 3.32 0.00 0.00 2.57
4727 4929 5.470368 CGTATACACTCACCCCTATGAATG 58.530 45.833 3.32 0.00 32.12 2.67
4728 4930 2.717639 ACACTCACCCCTATGAATGC 57.282 50.000 0.00 0.00 28.78 3.56
4729 4931 1.134401 ACACTCACCCCTATGAATGCG 60.134 52.381 0.00 0.00 28.78 4.73
4730 4932 0.179045 ACTCACCCCTATGAATGCGC 60.179 55.000 0.00 0.00 0.00 6.09
4731 4933 0.179048 CTCACCCCTATGAATGCGCA 60.179 55.000 14.96 14.96 0.00 6.09
4732 4934 0.463654 TCACCCCTATGAATGCGCAC 60.464 55.000 14.90 0.12 0.00 5.34
4733 4935 0.747644 CACCCCTATGAATGCGCACA 60.748 55.000 14.90 7.96 0.00 4.57
4734 4936 0.748005 ACCCCTATGAATGCGCACAC 60.748 55.000 14.90 10.84 0.00 3.82
4735 4937 1.643292 CCCTATGAATGCGCACACG 59.357 57.895 14.90 2.06 44.07 4.49
4745 4947 3.411351 CGCACACGCACACCCTAC 61.411 66.667 0.00 0.00 38.40 3.18
4746 4948 3.047877 GCACACGCACACCCTACC 61.048 66.667 0.00 0.00 38.36 3.18
4747 4949 2.741092 CACACGCACACCCTACCT 59.259 61.111 0.00 0.00 0.00 3.08
4748 4950 1.374252 CACACGCACACCCTACCTC 60.374 63.158 0.00 0.00 0.00 3.85
4749 4951 1.533273 ACACGCACACCCTACCTCT 60.533 57.895 0.00 0.00 0.00 3.69
4750 4952 0.251474 ACACGCACACCCTACCTCTA 60.251 55.000 0.00 0.00 0.00 2.43
4751 4953 1.112113 CACGCACACCCTACCTCTAT 58.888 55.000 0.00 0.00 0.00 1.98
4752 4954 1.112113 ACGCACACCCTACCTCTATG 58.888 55.000 0.00 0.00 0.00 2.23
4753 4955 1.341679 ACGCACACCCTACCTCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
4754 4956 1.338337 CGCACACCCTACCTCTATGAG 59.662 57.143 0.00 0.00 0.00 2.90
4755 4957 1.069358 GCACACCCTACCTCTATGAGC 59.931 57.143 0.00 0.00 0.00 4.26
4756 4958 2.388735 CACACCCTACCTCTATGAGCA 58.611 52.381 0.00 0.00 0.00 4.26
4757 4959 2.101582 CACACCCTACCTCTATGAGCAC 59.898 54.545 0.00 0.00 0.00 4.40
4758 4960 1.689273 CACCCTACCTCTATGAGCACC 59.311 57.143 0.00 0.00 0.00 5.01
4759 4961 1.576272 ACCCTACCTCTATGAGCACCT 59.424 52.381 0.00 0.00 0.00 4.00
4760 4962 2.243810 CCCTACCTCTATGAGCACCTC 58.756 57.143 0.00 0.00 0.00 3.85
4761 4963 2.243810 CCTACCTCTATGAGCACCTCC 58.756 57.143 0.00 0.00 0.00 4.30
4762 4964 2.424957 CCTACCTCTATGAGCACCTCCA 60.425 54.545 0.00 0.00 0.00 3.86
4763 4965 2.254152 ACCTCTATGAGCACCTCCAA 57.746 50.000 0.00 0.00 0.00 3.53
4764 4966 2.551270 ACCTCTATGAGCACCTCCAAA 58.449 47.619 0.00 0.00 0.00 3.28
4765 4967 2.912956 ACCTCTATGAGCACCTCCAAAA 59.087 45.455 0.00 0.00 0.00 2.44
4766 4968 3.054802 ACCTCTATGAGCACCTCCAAAAG 60.055 47.826 0.00 0.00 0.00 2.27
4767 4969 3.198635 CCTCTATGAGCACCTCCAAAAGA 59.801 47.826 0.00 0.00 0.00 2.52
4768 4970 4.187694 CTCTATGAGCACCTCCAAAAGAC 58.812 47.826 0.00 0.00 0.00 3.01
4769 4971 3.840666 TCTATGAGCACCTCCAAAAGACT 59.159 43.478 0.00 0.00 0.00 3.24
4770 4972 2.260844 TGAGCACCTCCAAAAGACTG 57.739 50.000 0.00 0.00 0.00 3.51
4771 4973 1.768275 TGAGCACCTCCAAAAGACTGA 59.232 47.619 0.00 0.00 0.00 3.41
4772 4974 2.224378 TGAGCACCTCCAAAAGACTGAG 60.224 50.000 0.00 0.00 0.00 3.35
4773 4975 0.877743 GCACCTCCAAAAGACTGAGC 59.122 55.000 0.00 0.00 0.00 4.26
4774 4976 1.528129 CACCTCCAAAAGACTGAGCC 58.472 55.000 0.00 0.00 0.00 4.70
4775 4977 0.035458 ACCTCCAAAAGACTGAGCCG 59.965 55.000 0.00 0.00 0.00 5.52
4776 4978 0.674895 CCTCCAAAAGACTGAGCCGG 60.675 60.000 0.00 0.00 0.00 6.13
4777 4979 1.301677 CTCCAAAAGACTGAGCCGGC 61.302 60.000 21.89 21.89 0.00 6.13
4778 4980 1.600636 CCAAAAGACTGAGCCGGCA 60.601 57.895 31.54 7.98 0.00 5.69
4779 4981 0.962356 CCAAAAGACTGAGCCGGCAT 60.962 55.000 31.54 14.28 0.00 4.40
4780 4982 1.678728 CCAAAAGACTGAGCCGGCATA 60.679 52.381 31.54 16.21 0.00 3.14
4781 4983 2.292267 CAAAAGACTGAGCCGGCATAT 58.708 47.619 31.54 8.11 0.00 1.78
4782 4984 2.246719 AAAGACTGAGCCGGCATATC 57.753 50.000 31.54 18.63 0.00 1.63
4783 4985 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
4784 4986 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
4785 4987 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
4786 4988 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
4787 4989 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
4788 4990 2.899900 ACTGAGCCGGCATATCATCTTA 59.100 45.455 31.54 0.00 0.00 2.10
4789 4991 3.324846 ACTGAGCCGGCATATCATCTTAA 59.675 43.478 31.54 0.00 0.00 1.85
4790 4992 4.202357 ACTGAGCCGGCATATCATCTTAAA 60.202 41.667 31.54 0.00 0.00 1.52
4791 4993 4.713553 TGAGCCGGCATATCATCTTAAAA 58.286 39.130 31.54 0.00 0.00 1.52
4792 4994 5.316167 TGAGCCGGCATATCATCTTAAAAT 58.684 37.500 31.54 0.06 0.00 1.82
4793 4995 5.769662 TGAGCCGGCATATCATCTTAAAATT 59.230 36.000 31.54 0.00 0.00 1.82
4794 4996 6.265196 TGAGCCGGCATATCATCTTAAAATTT 59.735 34.615 31.54 0.00 0.00 1.82
4795 4997 7.446931 TGAGCCGGCATATCATCTTAAAATTTA 59.553 33.333 31.54 0.00 0.00 1.40
4796 4998 7.593825 AGCCGGCATATCATCTTAAAATTTAC 58.406 34.615 31.54 0.00 0.00 2.01
4797 4999 6.523201 GCCGGCATATCATCTTAAAATTTACG 59.477 38.462 24.80 0.00 0.00 3.18
4798 5000 7.572353 GCCGGCATATCATCTTAAAATTTACGA 60.572 37.037 24.80 0.00 0.00 3.43
4799 5001 8.286800 CCGGCATATCATCTTAAAATTTACGAA 58.713 33.333 0.00 0.00 0.00 3.85
4800 5002 9.318041 CGGCATATCATCTTAAAATTTACGAAG 57.682 33.333 0.00 0.00 0.00 3.79
4806 5008 7.735500 TCATCTTAAAATTTACGAAGTCACCG 58.264 34.615 0.00 0.00 43.93 4.94
4807 5009 7.385752 TCATCTTAAAATTTACGAAGTCACCGT 59.614 33.333 0.00 0.00 43.93 4.83
4808 5010 8.649841 CATCTTAAAATTTACGAAGTCACCGTA 58.350 33.333 0.00 0.00 43.93 4.02
4809 5011 8.231304 TCTTAAAATTTACGAAGTCACCGTAG 57.769 34.615 0.00 0.00 43.93 3.51
4824 5026 1.575244 CGTAGGTACCTCATCGTCGA 58.425 55.000 20.32 0.00 0.00 4.20
4825 5027 1.260033 CGTAGGTACCTCATCGTCGAC 59.740 57.143 20.32 7.44 0.00 4.20
4826 5028 1.260033 GTAGGTACCTCATCGTCGACG 59.740 57.143 31.30 31.30 41.45 5.12
4836 5038 3.062786 TCGTCGACGAAAACGTCTC 57.937 52.632 36.25 11.12 46.30 3.36
4837 5039 0.719194 TCGTCGACGAAAACGTCTCG 60.719 55.000 36.25 16.02 46.30 4.04
4838 5040 0.719194 CGTCGACGAAAACGTCTCGA 60.719 55.000 33.35 11.25 43.02 4.04
4839 5041 1.599992 GTCGACGAAAACGTCTCGAT 58.400 50.000 22.39 9.83 37.84 3.59
4840 5042 1.974680 GTCGACGAAAACGTCTCGATT 59.025 47.619 22.39 5.20 37.84 3.34
4841 5043 2.403037 GTCGACGAAAACGTCTCGATTT 59.597 45.455 22.39 4.55 37.84 2.17
4842 5044 2.402707 TCGACGAAAACGTCTCGATTTG 59.597 45.455 22.39 8.59 39.60 2.32
4843 5045 2.402707 CGACGAAAACGTCTCGATTTGA 59.597 45.455 22.39 0.00 39.60 2.69
4844 5046 3.121596 CGACGAAAACGTCTCGATTTGAA 60.122 43.478 22.39 0.00 39.60 2.69
4845 5047 4.432503 CGACGAAAACGTCTCGATTTGAAT 60.433 41.667 22.39 2.68 39.60 2.57
4846 5048 4.942765 ACGAAAACGTCTCGATTTGAATC 58.057 39.130 22.39 0.00 39.60 2.52
4847 5049 4.143179 ACGAAAACGTCTCGATTTGAATCC 60.143 41.667 22.39 0.00 39.60 3.01
4848 5050 4.091509 CGAAAACGTCTCGATTTGAATCCT 59.908 41.667 13.19 0.00 38.61 3.24
4849 5051 4.928661 AAACGTCTCGATTTGAATCCTG 57.071 40.909 0.00 0.00 31.68 3.86
4850 5052 2.893637 ACGTCTCGATTTGAATCCTGG 58.106 47.619 0.00 0.00 31.68 4.45
4851 5053 2.233922 ACGTCTCGATTTGAATCCTGGT 59.766 45.455 0.00 0.00 31.68 4.00
4852 5054 2.604914 CGTCTCGATTTGAATCCTGGTG 59.395 50.000 0.00 0.00 31.68 4.17
4853 5055 2.939103 GTCTCGATTTGAATCCTGGTGG 59.061 50.000 0.00 0.00 31.68 4.61
4854 5056 2.092968 TCTCGATTTGAATCCTGGTGGG 60.093 50.000 0.00 0.00 31.68 4.61
4855 5057 0.740737 CGATTTGAATCCTGGTGGGC 59.259 55.000 0.00 0.00 34.39 5.36
4856 5058 1.683011 CGATTTGAATCCTGGTGGGCT 60.683 52.381 0.00 0.00 34.39 5.19
4857 5059 2.421388 CGATTTGAATCCTGGTGGGCTA 60.421 50.000 0.00 0.00 34.39 3.93
4858 5060 3.631250 GATTTGAATCCTGGTGGGCTAA 58.369 45.455 0.00 0.00 34.39 3.09
4859 5061 2.806945 TTGAATCCTGGTGGGCTAAG 57.193 50.000 0.00 0.00 34.39 2.18
4860 5062 0.918983 TGAATCCTGGTGGGCTAAGG 59.081 55.000 0.00 0.00 34.39 2.69
4861 5063 1.213296 GAATCCTGGTGGGCTAAGGA 58.787 55.000 0.00 0.00 44.06 3.36
4862 5064 3.683034 ATCCTGGTGGGCTAAGGAT 57.317 52.632 0.00 0.00 43.91 3.24
4863 5065 2.815357 ATCCTGGTGGGCTAAGGATA 57.185 50.000 2.50 0.00 46.69 2.59
4864 5066 1.802553 TCCTGGTGGGCTAAGGATAC 58.197 55.000 0.00 0.00 35.14 2.24
4865 5067 0.765510 CCTGGTGGGCTAAGGATACC 59.234 60.000 0.00 0.00 32.43 2.73
4866 5068 1.507140 CTGGTGGGCTAAGGATACCA 58.493 55.000 0.00 0.00 38.98 3.25
4870 5072 2.263895 TGGGCTAAGGATACCACAGT 57.736 50.000 0.00 0.00 37.17 3.55
4871 5073 2.116238 TGGGCTAAGGATACCACAGTC 58.884 52.381 0.00 0.00 37.17 3.51
4872 5074 1.416772 GGGCTAAGGATACCACAGTCC 59.583 57.143 0.00 0.00 34.64 3.85
4873 5075 1.416772 GGCTAAGGATACCACAGTCCC 59.583 57.143 0.00 0.00 35.00 4.46
4874 5076 2.399580 GCTAAGGATACCACAGTCCCT 58.600 52.381 0.00 0.00 35.00 4.20
4875 5077 2.365941 GCTAAGGATACCACAGTCCCTC 59.634 54.545 0.00 0.00 35.00 4.30
4876 5078 2.950990 AAGGATACCACAGTCCCTCT 57.049 50.000 0.00 0.00 35.00 3.69
4877 5079 4.691935 GCTAAGGATACCACAGTCCCTCTA 60.692 50.000 0.00 0.00 35.00 2.43
4878 5080 4.561254 AAGGATACCACAGTCCCTCTAT 57.439 45.455 0.00 0.00 35.00 1.98
4879 5081 4.120946 AGGATACCACAGTCCCTCTATC 57.879 50.000 0.00 0.00 35.00 2.08
4880 5082 3.166679 GGATACCACAGTCCCTCTATCC 58.833 54.545 0.00 0.00 0.00 2.59
4881 5083 3.438078 GGATACCACAGTCCCTCTATCCA 60.438 52.174 0.00 0.00 34.10 3.41
4882 5084 2.877154 ACCACAGTCCCTCTATCCAT 57.123 50.000 0.00 0.00 0.00 3.41
4883 5085 2.683768 ACCACAGTCCCTCTATCCATC 58.316 52.381 0.00 0.00 0.00 3.51
4884 5086 1.974236 CCACAGTCCCTCTATCCATCC 59.026 57.143 0.00 0.00 0.00 3.51
4885 5087 2.682594 CACAGTCCCTCTATCCATCCA 58.317 52.381 0.00 0.00 0.00 3.41
4886 5088 3.041211 CACAGTCCCTCTATCCATCCAA 58.959 50.000 0.00 0.00 0.00 3.53
4887 5089 3.041946 ACAGTCCCTCTATCCATCCAAC 58.958 50.000 0.00 0.00 0.00 3.77
4888 5090 2.370189 CAGTCCCTCTATCCATCCAACC 59.630 54.545 0.00 0.00 0.00 3.77
4889 5091 2.022035 AGTCCCTCTATCCATCCAACCA 60.022 50.000 0.00 0.00 0.00 3.67
4890 5092 2.104963 GTCCCTCTATCCATCCAACCAC 59.895 54.545 0.00 0.00 0.00 4.16
4891 5093 2.126882 CCCTCTATCCATCCAACCACA 58.873 52.381 0.00 0.00 0.00 4.17
4892 5094 2.105477 CCCTCTATCCATCCAACCACAG 59.895 54.545 0.00 0.00 0.00 3.66
4893 5095 2.105477 CCTCTATCCATCCAACCACAGG 59.895 54.545 0.00 0.00 0.00 4.00
4894 5096 2.774234 CTCTATCCATCCAACCACAGGT 59.226 50.000 0.00 0.00 37.65 4.00
4896 5098 4.367166 TCTATCCATCCAACCACAGGTTA 58.633 43.478 0.40 0.00 45.01 2.85
4897 5099 4.785914 TCTATCCATCCAACCACAGGTTAA 59.214 41.667 0.40 0.00 45.01 2.01
4898 5100 4.608170 ATCCATCCAACCACAGGTTAAT 57.392 40.909 0.40 0.00 45.01 1.40
4899 5101 4.396357 TCCATCCAACCACAGGTTAATT 57.604 40.909 0.40 0.00 45.01 1.40
4900 5102 4.340617 TCCATCCAACCACAGGTTAATTC 58.659 43.478 0.40 0.00 45.01 2.17
4901 5103 4.085733 CCATCCAACCACAGGTTAATTCA 58.914 43.478 0.40 0.00 45.01 2.57
4902 5104 4.711355 CCATCCAACCACAGGTTAATTCAT 59.289 41.667 0.40 0.00 45.01 2.57
4903 5105 5.394443 CCATCCAACCACAGGTTAATTCATG 60.394 44.000 0.40 0.00 45.01 3.07
4904 5106 4.085733 TCCAACCACAGGTTAATTCATGG 58.914 43.478 0.40 0.00 45.01 3.66
4905 5107 3.831911 CCAACCACAGGTTAATTCATGGT 59.168 43.478 0.40 0.00 45.01 3.55
4906 5108 4.321899 CCAACCACAGGTTAATTCATGGTG 60.322 45.833 0.40 0.00 45.01 4.17
4907 5109 3.430453 ACCACAGGTTAATTCATGGTGG 58.570 45.455 9.57 9.57 38.99 4.61
4908 5110 2.760092 CCACAGGTTAATTCATGGTGGG 59.240 50.000 0.00 0.00 0.00 4.61
4909 5111 3.563261 CCACAGGTTAATTCATGGTGGGA 60.563 47.826 0.00 0.00 0.00 4.37
4910 5112 4.280819 CACAGGTTAATTCATGGTGGGAT 58.719 43.478 0.00 0.00 0.00 3.85
4911 5113 4.098349 CACAGGTTAATTCATGGTGGGATG 59.902 45.833 0.00 0.00 0.00 3.51
4912 5114 3.068590 CAGGTTAATTCATGGTGGGATGC 59.931 47.826 0.00 0.00 0.00 3.91
4913 5115 3.030291 GGTTAATTCATGGTGGGATGCA 58.970 45.455 0.00 0.00 0.00 3.96
4914 5116 3.642848 GGTTAATTCATGGTGGGATGCAT 59.357 43.478 0.00 0.00 0.00 3.96
4915 5117 4.101430 GGTTAATTCATGGTGGGATGCATT 59.899 41.667 0.00 0.00 0.00 3.56
4916 5118 5.396660 GGTTAATTCATGGTGGGATGCATTT 60.397 40.000 0.00 0.00 0.00 2.32
4917 5119 4.411256 AATTCATGGTGGGATGCATTTC 57.589 40.909 0.00 0.00 0.00 2.17
4918 5120 2.528673 TCATGGTGGGATGCATTTCA 57.471 45.000 0.00 0.00 0.00 2.69
4919 5121 2.380941 TCATGGTGGGATGCATTTCAG 58.619 47.619 0.00 0.00 0.00 3.02
4920 5122 1.411246 CATGGTGGGATGCATTTCAGG 59.589 52.381 0.00 0.00 0.00 3.86
4921 5123 0.703488 TGGTGGGATGCATTTCAGGA 59.297 50.000 0.00 0.00 0.00 3.86
4922 5124 1.288633 TGGTGGGATGCATTTCAGGAT 59.711 47.619 0.00 0.00 0.00 3.24
4923 5125 1.684983 GGTGGGATGCATTTCAGGATG 59.315 52.381 0.00 0.00 37.54 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 9.244292 TCACAATTAGTCTCTCTACAAGTATGT 57.756 33.333 0.00 0.00 43.74 2.29
32 33 8.198109 TGGCTAAATCACAATTAGTCTCTCTAC 58.802 37.037 0.00 0.00 36.26 2.59
65 66 4.227300 ACCCCACACATATCTTGCTTCTAA 59.773 41.667 0.00 0.00 0.00 2.10
79 80 2.443958 TGTTTCATTCACCCCACACA 57.556 45.000 0.00 0.00 0.00 3.72
101 102 6.128769 CGAGAGTATCAACGTCTCTATAGGTG 60.129 46.154 3.90 0.00 38.45 4.00
117 119 7.618964 TCGTATTATGTTTTGCGAGAGTATC 57.381 36.000 0.00 0.00 0.00 2.24
126 128 9.058424 CATGATGATCATCGTATTATGTTTTGC 57.942 33.333 26.23 2.04 40.63 3.68
137 139 7.094032 ACTCTCTATTGCATGATGATCATCGTA 60.094 37.037 26.23 14.25 40.63 3.43
139 141 6.100668 ACTCTCTATTGCATGATGATCATCG 58.899 40.000 26.52 16.42 40.63 3.84
183 185 2.425592 TGGTGCTTCCAGTGACCG 59.574 61.111 0.00 0.00 41.93 4.79
203 205 5.464389 ACGATCTTACACTTAGCACGTTTTT 59.536 36.000 0.00 0.00 0.00 1.94
280 282 1.725931 CGATCTGTTTGCTTCAACGGC 60.726 52.381 0.00 0.00 0.00 5.68
290 292 4.151258 AGACATTGTTGCGATCTGTTTG 57.849 40.909 0.00 0.00 0.00 2.93
518 525 7.501844 ACTTACTTATTCTACAGCCAGGAATC 58.498 38.462 0.00 0.00 32.78 2.52
772 794 2.449322 CATCCCTCCCTCCCCCAG 60.449 72.222 0.00 0.00 0.00 4.45
890 931 1.002502 GTCGTGAAGGGGAAAGGGG 60.003 63.158 0.00 0.00 0.00 4.79
903 944 0.679640 AGAGAGAGAGGCAGGTCGTG 60.680 60.000 0.00 0.00 0.00 4.35
921 962 0.389166 GTCTCGAGTGGCCACAAGAG 60.389 60.000 35.56 35.56 37.96 2.85
922 963 1.112916 TGTCTCGAGTGGCCACAAGA 61.113 55.000 36.39 30.05 0.00 3.02
923 964 0.249868 TTGTCTCGAGTGGCCACAAG 60.250 55.000 36.39 27.65 0.00 3.16
924 965 0.249868 CTTGTCTCGAGTGGCCACAA 60.250 55.000 36.39 20.34 0.00 3.33
925 966 1.367471 CTTGTCTCGAGTGGCCACA 59.633 57.895 36.39 16.38 0.00 4.17
926 967 2.029844 GCTTGTCTCGAGTGGCCAC 61.030 63.158 29.22 29.22 0.00 5.01
1007 1078 1.498865 GGCATGGCAATCGTAGTCCG 61.499 60.000 15.47 0.00 38.13 4.79
1010 1081 1.523711 CGGGCATGGCAATCGTAGT 60.524 57.895 22.06 0.00 0.00 2.73
1019 1090 0.320247 CTCAGAGATACGGGCATGGC 60.320 60.000 11.56 11.56 0.00 4.40
1042 1113 2.037772 AGTAAGCAACAGGTGAGGTGAG 59.962 50.000 0.00 0.00 0.00 3.51
1043 1114 2.047061 AGTAAGCAACAGGTGAGGTGA 58.953 47.619 0.00 0.00 0.00 4.02
1044 1115 2.146342 CAGTAAGCAACAGGTGAGGTG 58.854 52.381 0.00 0.00 0.00 4.00
1045 1116 1.768870 ACAGTAAGCAACAGGTGAGGT 59.231 47.619 0.00 0.00 0.00 3.85
1046 1117 2.549754 CAACAGTAAGCAACAGGTGAGG 59.450 50.000 0.00 0.00 34.33 3.86
1047 1118 3.466836 TCAACAGTAAGCAACAGGTGAG 58.533 45.455 0.00 0.00 36.49 3.51
1048 1119 3.118408 ACTCAACAGTAAGCAACAGGTGA 60.118 43.478 0.00 3.05 38.84 4.02
1049 1120 3.206150 ACTCAACAGTAAGCAACAGGTG 58.794 45.455 0.00 0.00 33.75 4.00
1050 1121 3.560636 ACTCAACAGTAAGCAACAGGT 57.439 42.857 0.00 0.00 0.00 4.00
1051 1122 6.371809 TTTAACTCAACAGTAAGCAACAGG 57.628 37.500 0.00 0.00 30.14 4.00
1052 1123 9.944663 TTAATTTAACTCAACAGTAAGCAACAG 57.055 29.630 0.00 0.00 30.14 3.16
1154 1225 5.710984 TCTTCAGAGAATTAACTCCGTGTC 58.289 41.667 0.00 0.00 37.60 3.67
1171 1243 1.136147 GCAGTTGCGGCATCTTCAG 59.864 57.895 10.73 2.21 0.00 3.02
1177 1249 4.666253 ACTGGGCAGTTGCGGCAT 62.666 61.111 2.28 0.00 43.26 4.40
1219 1291 0.929244 AATGCCCCTTGAGTAGCCAT 59.071 50.000 0.00 0.00 0.00 4.40
1220 1292 0.704076 AAATGCCCCTTGAGTAGCCA 59.296 50.000 0.00 0.00 0.00 4.75
1221 1293 2.092375 AGTAAATGCCCCTTGAGTAGCC 60.092 50.000 0.00 0.00 0.00 3.93
1222 1294 2.945668 CAGTAAATGCCCCTTGAGTAGC 59.054 50.000 0.00 0.00 0.00 3.58
1235 1307 5.232463 ACAGCAAATTTGGAGCAGTAAATG 58.768 37.500 19.47 2.01 0.00 2.32
1237 1309 4.935352 ACAGCAAATTTGGAGCAGTAAA 57.065 36.364 19.47 0.00 0.00 2.01
1241 1313 3.755378 ACTCTACAGCAAATTTGGAGCAG 59.245 43.478 19.47 5.21 0.00 4.24
1245 1317 7.817418 AAAACTACTCTACAGCAAATTTGGA 57.183 32.000 19.47 7.05 0.00 3.53
1253 1325 8.559536 CAAATTGAGAAAAACTACTCTACAGCA 58.440 33.333 0.00 0.00 34.65 4.41
1256 1328 7.719633 AGCCAAATTGAGAAAAACTACTCTACA 59.280 33.333 0.00 0.00 34.65 2.74
1257 1329 8.100508 AGCCAAATTGAGAAAAACTACTCTAC 57.899 34.615 0.00 0.00 34.65 2.59
1258 1330 8.157476 AGAGCCAAATTGAGAAAAACTACTCTA 58.843 33.333 0.00 0.00 34.65 2.43
1259 1331 7.001073 AGAGCCAAATTGAGAAAAACTACTCT 58.999 34.615 0.00 0.00 34.65 3.24
1260 1332 7.080724 CAGAGCCAAATTGAGAAAAACTACTC 58.919 38.462 0.00 0.00 0.00 2.59
1269 1341 3.254166 GCTGAACAGAGCCAAATTGAGAA 59.746 43.478 5.97 0.00 32.35 2.87
1274 1346 2.867624 TGAGCTGAACAGAGCCAAATT 58.132 42.857 5.97 0.00 40.08 1.82
1280 1352 0.787183 GACGTTGAGCTGAACAGAGC 59.213 55.000 16.45 0.00 39.46 4.09
1281 1353 2.430546 AGACGTTGAGCTGAACAGAG 57.569 50.000 16.45 2.53 0.00 3.35
1282 1354 2.743938 GAAGACGTTGAGCTGAACAGA 58.256 47.619 16.45 0.00 0.00 3.41
1283 1355 1.453524 CGAAGACGTTGAGCTGAACAG 59.546 52.381 16.45 10.89 34.56 3.16
1297 1389 1.493311 CGCCTGCAGAAACGAAGAC 59.507 57.895 17.39 0.00 0.00 3.01
1300 1392 0.605319 AATCCGCCTGCAGAAACGAA 60.605 50.000 17.39 0.00 0.00 3.85
1336 1428 4.559063 CTCCTCCATGGGCCGCTG 62.559 72.222 13.02 0.00 36.20 5.18
1698 1790 3.991536 GAGGAGCTCCCGCACGAAC 62.992 68.421 29.54 7.04 40.87 3.95
2062 2160 3.015327 GCAGAAGCAGAATCACCTCAAT 58.985 45.455 0.00 0.00 41.58 2.57
2089 2187 3.345414 AGGCAAGATTCAGAAGCAGAAG 58.655 45.455 0.31 0.00 0.00 2.85
2090 2188 3.244665 TGAGGCAAGATTCAGAAGCAGAA 60.245 43.478 0.31 0.00 0.00 3.02
2094 2192 2.709213 ACTGAGGCAAGATTCAGAAGC 58.291 47.619 7.60 0.00 42.67 3.86
2095 2193 3.688673 GGAACTGAGGCAAGATTCAGAAG 59.311 47.826 7.60 0.00 42.67 2.85
2096 2194 3.072915 TGGAACTGAGGCAAGATTCAGAA 59.927 43.478 7.60 0.00 42.67 3.02
2098 2196 3.063510 TGGAACTGAGGCAAGATTCAG 57.936 47.619 0.00 0.00 44.93 3.02
2099 2197 3.009363 TCATGGAACTGAGGCAAGATTCA 59.991 43.478 0.00 0.00 0.00 2.57
2100 2198 3.614092 TCATGGAACTGAGGCAAGATTC 58.386 45.455 0.00 0.00 0.00 2.52
2102 2200 3.947612 ATCATGGAACTGAGGCAAGAT 57.052 42.857 0.00 0.00 0.00 2.40
2103 2201 3.726557 AATCATGGAACTGAGGCAAGA 57.273 42.857 0.00 0.00 0.00 3.02
2104 2202 4.796038 AAAATCATGGAACTGAGGCAAG 57.204 40.909 0.00 0.00 0.00 4.01
2124 2230 6.098982 ACCAACACATCAATTAGACCCAAAAA 59.901 34.615 0.00 0.00 0.00 1.94
2129 2235 4.589908 AGACCAACACATCAATTAGACCC 58.410 43.478 0.00 0.00 0.00 4.46
2132 2238 6.950842 AGATGAGACCAACACATCAATTAGA 58.049 36.000 0.00 0.00 44.81 2.10
2173 2279 9.500785 TCAATCACTGTAATGATGTTTAGTTCA 57.499 29.630 0.00 0.00 39.32 3.18
2200 2306 0.605319 TCGCCGCTTGGAGTGAAATT 60.605 50.000 0.00 0.00 33.70 1.82
2205 2311 1.741401 TTCATCGCCGCTTGGAGTG 60.741 57.895 0.00 0.00 33.70 3.51
2214 2320 9.135843 TGAATATATTTAGTTAGTTCATCGCCG 57.864 33.333 0.00 0.00 0.00 6.46
2234 2341 9.414295 CATGTTGAATGTTCACAAGTTGAATAT 57.586 29.630 10.54 0.00 46.14 1.28
2244 2351 2.288334 GCTGGCATGTTGAATGTTCACA 60.288 45.455 0.00 0.00 36.83 3.58
2245 2352 2.331194 GCTGGCATGTTGAATGTTCAC 58.669 47.619 0.00 0.00 36.83 3.18
2246 2353 1.273048 GGCTGGCATGTTGAATGTTCA 59.727 47.619 0.00 0.00 34.92 3.18
2247 2354 1.273048 TGGCTGGCATGTTGAATGTTC 59.727 47.619 0.00 0.00 0.00 3.18
2248 2355 1.274167 CTGGCTGGCATGTTGAATGTT 59.726 47.619 3.74 0.00 0.00 2.71
2250 2357 0.174845 CCTGGCTGGCATGTTGAATG 59.825 55.000 3.74 0.00 0.00 2.67
2251 2358 0.251922 ACCTGGCTGGCATGTTGAAT 60.252 50.000 10.71 0.00 40.22 2.57
2252 2359 0.469705 AACCTGGCTGGCATGTTGAA 60.470 50.000 20.66 0.00 40.22 2.69
2253 2360 1.153524 AACCTGGCTGGCATGTTGA 59.846 52.632 20.66 0.00 40.22 3.18
2254 2361 1.290955 CAACCTGGCTGGCATGTTG 59.709 57.895 27.96 27.96 40.22 3.33
2255 2362 1.152483 ACAACCTGGCTGGCATGTT 60.152 52.632 16.87 16.87 36.23 2.71
2258 2365 0.469705 TTTCACAACCTGGCTGGCAT 60.470 50.000 10.71 0.00 40.22 4.40
2259 2366 1.076412 TTTCACAACCTGGCTGGCA 60.076 52.632 10.71 3.18 40.22 4.92
2269 2376 7.241376 CCGTTATTATTCTCAGGTTTCACAAC 58.759 38.462 0.00 0.00 0.00 3.32
2271 2378 5.353123 GCCGTTATTATTCTCAGGTTTCACA 59.647 40.000 0.00 0.00 0.00 3.58
2272 2379 5.220796 GGCCGTTATTATTCTCAGGTTTCAC 60.221 44.000 0.00 0.00 0.00 3.18
2273 2380 4.879545 GGCCGTTATTATTCTCAGGTTTCA 59.120 41.667 0.00 0.00 0.00 2.69
2291 2417 0.534203 ATGTCAAACAGAACGGCCGT 60.534 50.000 28.70 28.70 0.00 5.68
2294 2420 3.236816 CAATCATGTCAAACAGAACGGC 58.763 45.455 0.00 0.00 0.00 5.68
2303 2429 7.284261 TCAACTTACAGGAACAATCATGTCAAA 59.716 33.333 0.00 0.00 46.99 2.69
2304 2430 6.770303 TCAACTTACAGGAACAATCATGTCAA 59.230 34.615 0.00 0.00 46.99 3.18
2318 2448 4.641396 TGTCCACAAGATCAACTTACAGG 58.359 43.478 0.00 0.00 37.03 4.00
2321 2451 6.801539 TGAATGTCCACAAGATCAACTTAC 57.198 37.500 0.00 0.00 37.03 2.34
2380 2512 9.196139 CCAAAGGACTGATTACCCAATAATTAA 57.804 33.333 0.00 0.00 33.37 1.40
2386 2533 3.245586 TGCCAAAGGACTGATTACCCAAT 60.246 43.478 0.00 0.00 0.00 3.16
2478 2628 8.888716 TGAGAGCTTAATTGATACGCATTTTTA 58.111 29.630 0.00 0.00 31.43 1.52
2499 2659 6.461110 AAATAATTCCCACAAGCATGAGAG 57.539 37.500 0.00 0.00 0.00 3.20
2578 2745 6.446781 AATGATGAAACACTGGCTTGATAG 57.553 37.500 0.00 0.00 0.00 2.08
2584 2751 5.796424 AAAGAAATGATGAAACACTGGCT 57.204 34.783 0.00 0.00 0.00 4.75
2585 2752 5.333568 GCAAAAGAAATGATGAAACACTGGC 60.334 40.000 0.00 0.00 0.00 4.85
2587 2754 6.563381 GCAGCAAAAGAAATGATGAAACACTG 60.563 38.462 0.00 0.00 36.32 3.66
2671 2870 5.862323 CAGTAAGAACGTGTTAGTACTGCAT 59.138 40.000 5.39 0.00 35.31 3.96
2686 2885 2.433868 TCACGACCTGCAGTAAGAAC 57.566 50.000 13.81 0.00 0.00 3.01
2701 2900 3.439293 AGCGACAATCAGATACTTCACG 58.561 45.455 0.00 0.00 0.00 4.35
2719 2918 1.057847 GAGTTGACGATGTCGAAAGCG 59.942 52.381 12.49 12.49 43.02 4.68
2722 2921 3.364889 ACAGAGTTGACGATGTCGAAA 57.635 42.857 9.67 0.70 43.02 3.46
3073 3272 2.190325 GGACGTTCAGTTCGATCGAT 57.810 50.000 20.18 1.17 38.81 3.59
3082 3281 2.050351 CTGTCGCGGACGTTCAGT 60.050 61.111 6.13 0.00 41.18 3.41
3094 3293 1.959899 GAGTCATGCCGTTGCTGTCG 61.960 60.000 0.00 0.00 38.71 4.35
3115 3314 4.565652 GGCTGTTTCCTCAGTAAATCCAGA 60.566 45.833 0.00 0.00 37.70 3.86
3235 3434 1.608055 TGTGGTGCATCTTCAGTTGG 58.392 50.000 0.00 0.00 0.00 3.77
3238 3437 2.555325 CACAATGTGGTGCATCTTCAGT 59.445 45.455 5.29 0.00 36.67 3.41
3454 3653 0.251354 TGAGCAGGACCTTGAGATGC 59.749 55.000 0.00 0.00 37.15 3.91
3503 3702 2.682582 GATTCCTTAGGGCTGCCGGG 62.683 65.000 13.40 11.84 0.00 5.73
3550 3749 1.088340 CATGGCTCCAGCTCTTGACG 61.088 60.000 0.00 0.00 41.70 4.35
3590 3789 1.902508 CTTGGAGTACCTCTGCCTCAA 59.097 52.381 0.00 0.00 37.04 3.02
3672 3871 0.036577 AGGCAGTGTGTGATCAGCTC 60.037 55.000 0.00 0.00 0.00 4.09
3679 3878 0.036732 GGGATTCAGGCAGTGTGTGA 59.963 55.000 0.00 0.00 0.00 3.58
3705 3904 1.219393 GAAGACCAGGAGGCCGAAG 59.781 63.158 0.00 0.00 39.06 3.79
3770 3969 1.269012 CTGGCATTGGGTGATGGTTT 58.731 50.000 0.00 0.00 0.00 3.27
3832 4031 6.765036 CGAGGTACTGGTTCATAAGTCTACTA 59.235 42.308 0.00 0.00 41.55 1.82
3875 4074 1.452108 GCCCCGAGGTTGAATCCTG 60.452 63.158 0.00 0.00 38.02 3.86
3876 4075 1.915078 CTGCCCCGAGGTTGAATCCT 61.915 60.000 0.00 0.00 40.97 3.24
3937 4136 7.039853 TGTCAAATTTGAGTGGCATCATCTAAA 60.040 33.333 21.05 0.00 37.98 1.85
3968 4167 3.420893 AGCATCGAATCAAGGGAAACAA 58.579 40.909 0.00 0.00 0.00 2.83
3978 4177 6.371548 AGCTGTAACTTTTAAGCATCGAATCA 59.628 34.615 0.00 0.00 38.14 2.57
4031 4230 5.694231 TCAAACAATGAGGACTGTGATTG 57.306 39.130 0.00 0.00 33.04 2.67
4104 4303 9.211485 ACATGGTAACCGCATTATATTAGTAAC 57.789 33.333 0.00 0.00 0.00 2.50
4113 4312 5.295787 CACACTAACATGGTAACCGCATTAT 59.704 40.000 0.00 0.00 0.00 1.28
4126 4325 2.485426 CCACAGAAGGCACACTAACATG 59.515 50.000 0.00 0.00 0.00 3.21
4142 4341 2.038557 AGTTACACTTACCAGCCCACAG 59.961 50.000 0.00 0.00 0.00 3.66
4288 4487 8.243289 TCATGTAGACATTATGTAATGATGCG 57.757 34.615 17.19 2.50 43.48 4.73
4294 4493 7.992608 TGCACCTTCATGTAGACATTATGTAAT 59.007 33.333 0.00 0.00 33.61 1.89
4327 4526 2.456989 GCACATGCGAAGAATGATTGG 58.543 47.619 0.00 0.00 0.00 3.16
4340 4539 1.747355 AGAATAACAGCAGGCACATGC 59.253 47.619 0.00 0.00 46.88 4.06
4430 4631 3.061161 GCAAAAATGATGTAGCAAAGCCG 59.939 43.478 0.00 0.00 0.00 5.52
4431 4632 4.248058 AGCAAAAATGATGTAGCAAAGCC 58.752 39.130 0.00 0.00 0.00 4.35
4432 4633 5.851047 AAGCAAAAATGATGTAGCAAAGC 57.149 34.783 0.00 0.00 0.00 3.51
4433 4634 7.383029 TGAGAAAGCAAAAATGATGTAGCAAAG 59.617 33.333 0.00 0.00 0.00 2.77
4434 4635 7.208777 TGAGAAAGCAAAAATGATGTAGCAAA 58.791 30.769 0.00 0.00 0.00 3.68
4435 4636 6.747125 TGAGAAAGCAAAAATGATGTAGCAA 58.253 32.000 0.00 0.00 0.00 3.91
4436 4637 6.330004 TGAGAAAGCAAAAATGATGTAGCA 57.670 33.333 0.00 0.00 0.00 3.49
4437 4638 6.810182 ACATGAGAAAGCAAAAATGATGTAGC 59.190 34.615 0.00 0.00 0.00 3.58
4438 4639 9.499585 CTACATGAGAAAGCAAAAATGATGTAG 57.500 33.333 0.00 0.00 36.24 2.74
4439 4640 7.970061 GCTACATGAGAAAGCAAAAATGATGTA 59.030 33.333 0.00 0.00 36.26 2.29
4440 4641 6.810182 GCTACATGAGAAAGCAAAAATGATGT 59.190 34.615 0.00 0.00 36.26 3.06
4441 4642 6.255020 GGCTACATGAGAAAGCAAAAATGATG 59.745 38.462 0.00 0.00 38.01 3.07
4442 4643 6.071221 TGGCTACATGAGAAAGCAAAAATGAT 60.071 34.615 0.00 0.00 38.01 2.45
4443 4644 5.243507 TGGCTACATGAGAAAGCAAAAATGA 59.756 36.000 0.00 0.00 38.01 2.57
4444 4645 5.346822 GTGGCTACATGAGAAAGCAAAAATG 59.653 40.000 0.00 0.00 38.01 2.32
4445 4646 5.473039 GTGGCTACATGAGAAAGCAAAAAT 58.527 37.500 0.00 0.00 38.01 1.82
4446 4647 4.556501 CGTGGCTACATGAGAAAGCAAAAA 60.557 41.667 0.00 0.00 38.01 1.94
4447 4648 3.058293 CGTGGCTACATGAGAAAGCAAAA 60.058 43.478 0.00 0.00 38.01 2.44
4448 4649 2.483877 CGTGGCTACATGAGAAAGCAAA 59.516 45.455 0.00 0.00 38.01 3.68
4449 4650 2.076100 CGTGGCTACATGAGAAAGCAA 58.924 47.619 0.00 0.00 38.01 3.91
4450 4651 1.675714 CCGTGGCTACATGAGAAAGCA 60.676 52.381 0.00 0.00 38.01 3.91
4451 4652 1.009829 CCGTGGCTACATGAGAAAGC 58.990 55.000 0.00 2.60 35.58 3.51
4452 4653 2.002586 CACCGTGGCTACATGAGAAAG 58.997 52.381 0.00 0.00 35.58 2.62
4453 4654 1.338674 CCACCGTGGCTACATGAGAAA 60.339 52.381 4.16 0.00 35.58 2.52
4454 4655 0.249120 CCACCGTGGCTACATGAGAA 59.751 55.000 4.16 0.00 35.58 2.87
4455 4656 0.613572 TCCACCGTGGCTACATGAGA 60.614 55.000 13.19 0.00 37.47 3.27
4456 4657 0.179100 CTCCACCGTGGCTACATGAG 60.179 60.000 13.19 0.00 37.47 2.90
4457 4658 0.613572 TCTCCACCGTGGCTACATGA 60.614 55.000 13.19 1.64 37.47 3.07
4458 4659 0.249120 TTCTCCACCGTGGCTACATG 59.751 55.000 13.19 0.00 37.47 3.21
4459 4660 0.537188 CTTCTCCACCGTGGCTACAT 59.463 55.000 13.19 0.00 37.47 2.29
4460 4661 0.830444 ACTTCTCCACCGTGGCTACA 60.830 55.000 13.19 0.00 37.47 2.74
4461 4662 0.389948 CACTTCTCCACCGTGGCTAC 60.390 60.000 13.19 0.00 37.47 3.58
4609 4811 3.250762 GGTTTACCCAACGACTAACCAAC 59.749 47.826 0.00 0.00 36.05 3.77
4611 4813 2.547642 CGGTTTACCCAACGACTAACCA 60.548 50.000 0.00 0.00 35.83 3.67
4649 4851 6.591834 TGTTAAAATAAAAATGCATCCCACCG 59.408 34.615 0.00 0.00 0.00 4.94
4666 4868 8.227791 CGCTTGTGTCTGTACTTATGTTAAAAT 58.772 33.333 0.00 0.00 0.00 1.82
4667 4869 7.569297 CGCTTGTGTCTGTACTTATGTTAAAA 58.431 34.615 0.00 0.00 0.00 1.52
4668 4870 6.347079 GCGCTTGTGTCTGTACTTATGTTAAA 60.347 38.462 0.00 0.00 0.00 1.52
4669 4871 5.119588 GCGCTTGTGTCTGTACTTATGTTAA 59.880 40.000 0.00 0.00 0.00 2.01
4670 4872 4.624024 GCGCTTGTGTCTGTACTTATGTTA 59.376 41.667 0.00 0.00 0.00 2.41
4671 4873 3.432252 GCGCTTGTGTCTGTACTTATGTT 59.568 43.478 0.00 0.00 0.00 2.71
4672 4874 2.993899 GCGCTTGTGTCTGTACTTATGT 59.006 45.455 0.00 0.00 0.00 2.29
4673 4875 2.348666 GGCGCTTGTGTCTGTACTTATG 59.651 50.000 7.64 0.00 0.00 1.90
4674 4876 2.028476 TGGCGCTTGTGTCTGTACTTAT 60.028 45.455 7.64 0.00 0.00 1.73
4675 4877 1.341852 TGGCGCTTGTGTCTGTACTTA 59.658 47.619 7.64 0.00 0.00 2.24
4676 4878 0.105964 TGGCGCTTGTGTCTGTACTT 59.894 50.000 7.64 0.00 0.00 2.24
4677 4879 0.321671 ATGGCGCTTGTGTCTGTACT 59.678 50.000 7.64 0.00 0.00 2.73
4678 4880 2.004583 TATGGCGCTTGTGTCTGTAC 57.995 50.000 7.64 0.00 0.00 2.90
4679 4881 2.979814 ATATGGCGCTTGTGTCTGTA 57.020 45.000 7.64 0.00 0.00 2.74
4680 4882 2.093711 TGTATATGGCGCTTGTGTCTGT 60.094 45.455 7.64 0.00 0.00 3.41
4681 4883 2.285220 GTGTATATGGCGCTTGTGTCTG 59.715 50.000 7.64 0.00 0.00 3.51
4682 4884 2.550978 GTGTATATGGCGCTTGTGTCT 58.449 47.619 7.64 0.00 0.00 3.41
4683 4885 1.257936 CGTGTATATGGCGCTTGTGTC 59.742 52.381 7.64 0.00 0.00 3.67
4684 4886 1.286501 CGTGTATATGGCGCTTGTGT 58.713 50.000 7.64 0.00 0.00 3.72
4685 4887 0.042188 GCGTGTATATGGCGCTTGTG 60.042 55.000 7.64 0.00 46.55 3.33
4686 4888 2.307363 GCGTGTATATGGCGCTTGT 58.693 52.632 7.64 0.00 46.55 3.16
4692 4894 3.829948 AGTGTATACGCGTGTATATGGC 58.170 45.455 26.67 19.62 43.52 4.40
4693 4895 4.849926 GTGAGTGTATACGCGTGTATATGG 59.150 45.833 26.67 0.00 43.52 2.74
4694 4896 4.849926 GGTGAGTGTATACGCGTGTATATG 59.150 45.833 26.67 0.00 43.52 1.78
4695 4897 4.083110 GGGTGAGTGTATACGCGTGTATAT 60.083 45.833 26.67 14.50 43.52 0.86
4696 4898 3.250762 GGGTGAGTGTATACGCGTGTATA 59.749 47.826 24.59 21.82 41.50 1.47
4697 4899 2.033801 GGGTGAGTGTATACGCGTGTAT 59.966 50.000 24.59 23.84 43.62 2.29
4698 4900 1.401552 GGGTGAGTGTATACGCGTGTA 59.598 52.381 24.59 18.01 34.45 2.90
4699 4901 0.171903 GGGTGAGTGTATACGCGTGT 59.828 55.000 24.59 19.31 0.00 4.49
4700 4902 0.526954 GGGGTGAGTGTATACGCGTG 60.527 60.000 24.59 0.00 0.00 5.34
4701 4903 0.682209 AGGGGTGAGTGTATACGCGT 60.682 55.000 19.17 19.17 0.00 6.01
4702 4904 1.311859 TAGGGGTGAGTGTATACGCG 58.688 55.000 3.53 3.53 0.00 6.01
4703 4905 2.889045 TCATAGGGGTGAGTGTATACGC 59.111 50.000 8.42 8.42 0.00 4.42
4704 4906 5.470368 CATTCATAGGGGTGAGTGTATACG 58.530 45.833 0.00 0.00 32.90 3.06
4705 4907 5.238583 GCATTCATAGGGGTGAGTGTATAC 58.761 45.833 0.00 0.00 37.92 1.47
4706 4908 4.021456 CGCATTCATAGGGGTGAGTGTATA 60.021 45.833 0.00 0.00 37.92 1.47
4707 4909 3.244215 CGCATTCATAGGGGTGAGTGTAT 60.244 47.826 0.00 0.00 37.92 2.29
4708 4910 2.102420 CGCATTCATAGGGGTGAGTGTA 59.898 50.000 0.00 0.00 37.92 2.90
4709 4911 1.134401 CGCATTCATAGGGGTGAGTGT 60.134 52.381 0.00 0.00 37.92 3.55
4710 4912 1.586422 CGCATTCATAGGGGTGAGTG 58.414 55.000 0.00 0.00 38.45 3.51
4711 4913 0.179045 GCGCATTCATAGGGGTGAGT 60.179 55.000 0.30 0.00 0.00 3.41
4712 4914 0.179048 TGCGCATTCATAGGGGTGAG 60.179 55.000 5.66 0.00 0.00 3.51
4713 4915 0.463654 GTGCGCATTCATAGGGGTGA 60.464 55.000 15.91 0.00 0.00 4.02
4714 4916 0.747644 TGTGCGCATTCATAGGGGTG 60.748 55.000 15.91 0.00 0.00 4.61
4715 4917 0.748005 GTGTGCGCATTCATAGGGGT 60.748 55.000 15.91 0.00 0.00 4.95
4716 4918 1.775039 CGTGTGCGCATTCATAGGGG 61.775 60.000 15.91 0.00 0.00 4.79
4717 4919 1.643292 CGTGTGCGCATTCATAGGG 59.357 57.895 15.91 0.00 0.00 3.53
4729 4931 3.047877 GGTAGGGTGTGCGTGTGC 61.048 66.667 0.00 0.00 43.20 4.57
4730 4932 1.374252 GAGGTAGGGTGTGCGTGTG 60.374 63.158 0.00 0.00 0.00 3.82
4731 4933 0.251474 TAGAGGTAGGGTGTGCGTGT 60.251 55.000 0.00 0.00 0.00 4.49
4732 4934 1.112113 ATAGAGGTAGGGTGTGCGTG 58.888 55.000 0.00 0.00 0.00 5.34
4733 4935 1.112113 CATAGAGGTAGGGTGTGCGT 58.888 55.000 0.00 0.00 0.00 5.24
4734 4936 1.338337 CTCATAGAGGTAGGGTGTGCG 59.662 57.143 0.00 0.00 0.00 5.34
4735 4937 1.069358 GCTCATAGAGGTAGGGTGTGC 59.931 57.143 0.00 0.00 0.00 4.57
4736 4938 2.101582 GTGCTCATAGAGGTAGGGTGTG 59.898 54.545 0.00 0.00 0.00 3.82
4737 4939 2.389715 GTGCTCATAGAGGTAGGGTGT 58.610 52.381 0.00 0.00 0.00 4.16
4738 4940 1.689273 GGTGCTCATAGAGGTAGGGTG 59.311 57.143 0.00 0.00 0.00 4.61
4739 4941 1.576272 AGGTGCTCATAGAGGTAGGGT 59.424 52.381 0.00 0.00 0.00 4.34
4740 4942 2.243810 GAGGTGCTCATAGAGGTAGGG 58.756 57.143 0.00 0.00 0.00 3.53
4741 4943 2.243810 GGAGGTGCTCATAGAGGTAGG 58.756 57.143 0.00 0.00 31.08 3.18
4742 4944 2.950781 TGGAGGTGCTCATAGAGGTAG 58.049 52.381 0.00 0.00 31.08 3.18
4743 4945 3.398318 TTGGAGGTGCTCATAGAGGTA 57.602 47.619 0.00 0.00 31.08 3.08
4744 4946 2.254152 TTGGAGGTGCTCATAGAGGT 57.746 50.000 0.00 0.00 31.08 3.85
4745 4947 3.198635 TCTTTTGGAGGTGCTCATAGAGG 59.801 47.826 0.00 0.00 31.08 3.69
4746 4948 4.081198 AGTCTTTTGGAGGTGCTCATAGAG 60.081 45.833 0.00 0.00 31.08 2.43
4747 4949 3.840666 AGTCTTTTGGAGGTGCTCATAGA 59.159 43.478 0.00 0.00 31.08 1.98
4748 4950 3.937706 CAGTCTTTTGGAGGTGCTCATAG 59.062 47.826 0.00 0.00 31.08 2.23
4749 4951 3.582647 TCAGTCTTTTGGAGGTGCTCATA 59.417 43.478 0.00 0.00 31.08 2.15
4750 4952 2.373169 TCAGTCTTTTGGAGGTGCTCAT 59.627 45.455 0.00 0.00 31.08 2.90
4751 4953 1.768275 TCAGTCTTTTGGAGGTGCTCA 59.232 47.619 0.00 0.00 31.08 4.26
4752 4954 2.421619 CTCAGTCTTTTGGAGGTGCTC 58.578 52.381 0.00 0.00 0.00 4.26
4753 4955 1.544314 GCTCAGTCTTTTGGAGGTGCT 60.544 52.381 0.00 0.00 0.00 4.40
4754 4956 0.877743 GCTCAGTCTTTTGGAGGTGC 59.122 55.000 0.00 0.00 0.00 5.01
4755 4957 1.528129 GGCTCAGTCTTTTGGAGGTG 58.472 55.000 0.00 0.00 0.00 4.00
4756 4958 0.035458 CGGCTCAGTCTTTTGGAGGT 59.965 55.000 0.00 0.00 0.00 3.85
4757 4959 0.674895 CCGGCTCAGTCTTTTGGAGG 60.675 60.000 0.00 0.00 0.00 4.30
4758 4960 1.301677 GCCGGCTCAGTCTTTTGGAG 61.302 60.000 22.15 0.00 0.00 3.86
4759 4961 1.302511 GCCGGCTCAGTCTTTTGGA 60.303 57.895 22.15 0.00 0.00 3.53
4760 4962 0.962356 ATGCCGGCTCAGTCTTTTGG 60.962 55.000 29.70 0.00 0.00 3.28
4761 4963 1.737838 TATGCCGGCTCAGTCTTTTG 58.262 50.000 29.70 0.00 0.00 2.44
4762 4964 2.092968 TGATATGCCGGCTCAGTCTTTT 60.093 45.455 29.70 1.60 0.00 2.27
4763 4965 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
4764 4966 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
4765 4967 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
4766 4968 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
4767 4969 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
4768 4970 2.469274 AAGATGATATGCCGGCTCAG 57.531 50.000 29.70 0.00 0.00 3.35
4769 4971 4.350368 TTTAAGATGATATGCCGGCTCA 57.650 40.909 29.70 23.34 0.00 4.26
4770 4972 5.886960 ATTTTAAGATGATATGCCGGCTC 57.113 39.130 29.70 17.89 0.00 4.70
4771 4973 6.655078 AAATTTTAAGATGATATGCCGGCT 57.345 33.333 29.70 15.76 0.00 5.52
4772 4974 6.523201 CGTAAATTTTAAGATGATATGCCGGC 59.477 38.462 22.73 22.73 0.00 6.13
4773 4975 7.802738 TCGTAAATTTTAAGATGATATGCCGG 58.197 34.615 0.00 0.00 0.00 6.13
4774 4976 9.318041 CTTCGTAAATTTTAAGATGATATGCCG 57.682 33.333 0.00 0.00 0.00 5.69
4780 4982 8.388103 CGGTGACTTCGTAAATTTTAAGATGAT 58.612 33.333 18.20 8.01 0.00 2.45
4781 4983 7.385752 ACGGTGACTTCGTAAATTTTAAGATGA 59.614 33.333 18.20 2.32 39.22 2.92
4782 4984 7.515643 ACGGTGACTTCGTAAATTTTAAGATG 58.484 34.615 12.94 12.94 39.22 2.90
4783 4985 7.662604 ACGGTGACTTCGTAAATTTTAAGAT 57.337 32.000 12.10 0.00 39.22 2.40
4784 4986 7.329226 CCTACGGTGACTTCGTAAATTTTAAGA 59.671 37.037 12.10 1.32 41.62 2.10
4785 4987 7.116805 ACCTACGGTGACTTCGTAAATTTTAAG 59.883 37.037 0.00 1.31 41.62 1.85
4786 4988 6.928492 ACCTACGGTGACTTCGTAAATTTTAA 59.072 34.615 0.00 0.00 41.62 1.52
4787 4989 6.454795 ACCTACGGTGACTTCGTAAATTTTA 58.545 36.000 0.00 0.00 41.62 1.52
4788 4990 5.299949 ACCTACGGTGACTTCGTAAATTTT 58.700 37.500 0.00 0.00 41.62 1.82
4789 4991 4.886579 ACCTACGGTGACTTCGTAAATTT 58.113 39.130 0.00 0.00 41.62 1.82
4790 4992 4.525912 ACCTACGGTGACTTCGTAAATT 57.474 40.909 0.00 0.00 41.62 1.82
4791 4993 4.142381 GGTACCTACGGTGACTTCGTAAAT 60.142 45.833 4.06 0.00 41.62 1.40
4792 4994 3.190535 GGTACCTACGGTGACTTCGTAAA 59.809 47.826 4.06 0.00 41.62 2.01
4793 4995 2.747446 GGTACCTACGGTGACTTCGTAA 59.253 50.000 4.06 0.00 41.62 3.18
4794 4996 2.027192 AGGTACCTACGGTGACTTCGTA 60.027 50.000 14.41 0.00 41.38 3.43
4795 4997 1.168714 GGTACCTACGGTGACTTCGT 58.831 55.000 4.06 0.00 43.64 3.85
4796 4998 1.399791 GAGGTACCTACGGTGACTTCG 59.600 57.143 16.29 0.00 36.19 3.79
4797 4999 2.440409 TGAGGTACCTACGGTGACTTC 58.560 52.381 16.29 0.00 36.19 3.01
4798 5000 2.592102 TGAGGTACCTACGGTGACTT 57.408 50.000 16.29 0.00 36.19 3.01
4799 5001 2.652590 GATGAGGTACCTACGGTGACT 58.347 52.381 16.29 0.00 36.19 3.41
4800 5002 1.332997 CGATGAGGTACCTACGGTGAC 59.667 57.143 16.29 0.34 36.19 3.67
4801 5003 1.065199 ACGATGAGGTACCTACGGTGA 60.065 52.381 27.19 7.73 36.19 4.02
4802 5004 1.332997 GACGATGAGGTACCTACGGTG 59.667 57.143 27.19 15.79 36.19 4.94
4803 5005 1.673168 GACGATGAGGTACCTACGGT 58.327 55.000 27.19 18.55 40.16 4.83
4804 5006 0.585357 CGACGATGAGGTACCTACGG 59.415 60.000 27.19 16.18 0.00 4.02
4805 5007 1.260033 GTCGACGATGAGGTACCTACG 59.740 57.143 24.27 24.27 0.00 3.51
4806 5008 1.260033 CGTCGACGATGAGGTACCTAC 59.740 57.143 33.35 9.34 43.02 3.18
4807 5009 1.136891 TCGTCGACGATGAGGTACCTA 59.863 52.381 34.97 10.04 44.22 3.08
4808 5010 0.107993 TCGTCGACGATGAGGTACCT 60.108 55.000 34.97 16.26 44.22 3.08
4809 5011 2.387309 TCGTCGACGATGAGGTACC 58.613 57.895 34.97 2.73 44.22 3.34
4824 5026 4.143179 GGATTCAAATCGAGACGTTTTCGT 60.143 41.667 18.69 7.59 46.70 3.85
4825 5027 4.091509 AGGATTCAAATCGAGACGTTTTCG 59.908 41.667 14.84 14.84 41.64 3.46
4826 5028 5.316770 CAGGATTCAAATCGAGACGTTTTC 58.683 41.667 0.00 0.00 36.27 2.29
4827 5029 4.154195 CCAGGATTCAAATCGAGACGTTTT 59.846 41.667 0.00 0.00 36.27 2.43
4828 5030 3.684788 CCAGGATTCAAATCGAGACGTTT 59.315 43.478 0.00 0.00 36.27 3.60
4829 5031 3.262420 CCAGGATTCAAATCGAGACGTT 58.738 45.455 0.00 0.00 36.27 3.99
4830 5032 2.233922 ACCAGGATTCAAATCGAGACGT 59.766 45.455 0.00 0.00 36.27 4.34
4831 5033 2.604914 CACCAGGATTCAAATCGAGACG 59.395 50.000 0.00 0.00 36.27 4.18
4832 5034 2.939103 CCACCAGGATTCAAATCGAGAC 59.061 50.000 0.00 0.00 36.27 3.36
4833 5035 2.092968 CCCACCAGGATTCAAATCGAGA 60.093 50.000 0.00 0.00 38.24 4.04
4834 5036 2.292267 CCCACCAGGATTCAAATCGAG 58.708 52.381 0.00 0.00 38.24 4.04
4835 5037 1.681780 GCCCACCAGGATTCAAATCGA 60.682 52.381 0.00 0.00 38.24 3.59
4836 5038 0.740737 GCCCACCAGGATTCAAATCG 59.259 55.000 0.00 0.00 38.24 3.34
4837 5039 2.149973 AGCCCACCAGGATTCAAATC 57.850 50.000 0.00 0.00 38.24 2.17
4838 5040 3.628257 CCTTAGCCCACCAGGATTCAAAT 60.628 47.826 0.00 0.00 38.24 2.32
4839 5041 2.291540 CCTTAGCCCACCAGGATTCAAA 60.292 50.000 0.00 0.00 38.24 2.69
4840 5042 1.284785 CCTTAGCCCACCAGGATTCAA 59.715 52.381 0.00 0.00 38.24 2.69
4841 5043 0.918983 CCTTAGCCCACCAGGATTCA 59.081 55.000 0.00 0.00 38.24 2.57
4842 5044 1.213296 TCCTTAGCCCACCAGGATTC 58.787 55.000 0.00 0.00 38.24 2.52
4843 5045 1.912862 ATCCTTAGCCCACCAGGATT 58.087 50.000 0.00 0.00 43.77 3.01
4844 5046 3.683034 ATCCTTAGCCCACCAGGAT 57.317 52.632 0.00 0.00 41.81 3.24
4845 5047 1.694693 GGTATCCTTAGCCCACCAGGA 60.695 57.143 0.00 0.00 41.08 3.86
4846 5048 0.765510 GGTATCCTTAGCCCACCAGG 59.234 60.000 0.00 0.00 39.47 4.45
4847 5049 1.141053 GTGGTATCCTTAGCCCACCAG 59.859 57.143 0.00 0.00 41.20 4.00
4848 5050 1.209621 GTGGTATCCTTAGCCCACCA 58.790 55.000 0.00 0.00 41.20 4.17
4849 5051 1.141053 CTGTGGTATCCTTAGCCCACC 59.859 57.143 5.31 0.00 45.41 4.61
4850 5052 1.838077 ACTGTGGTATCCTTAGCCCAC 59.162 52.381 0.00 0.00 46.04 4.61
4851 5053 2.116238 GACTGTGGTATCCTTAGCCCA 58.884 52.381 0.00 0.00 0.00 5.36
4852 5054 1.416772 GGACTGTGGTATCCTTAGCCC 59.583 57.143 0.00 0.00 31.75 5.19
4853 5055 1.416772 GGGACTGTGGTATCCTTAGCC 59.583 57.143 0.00 0.00 35.15 3.93
4854 5056 2.365941 GAGGGACTGTGGTATCCTTAGC 59.634 54.545 0.00 0.00 41.55 3.09
4855 5057 3.917300 AGAGGGACTGTGGTATCCTTAG 58.083 50.000 0.00 0.00 41.55 2.18
4856 5058 5.459241 GGATAGAGGGACTGTGGTATCCTTA 60.459 48.000 0.00 0.00 41.55 2.69
4857 5059 2.950990 AGAGGGACTGTGGTATCCTT 57.049 50.000 0.00 0.00 41.55 3.36
4858 5060 3.181416 GGATAGAGGGACTGTGGTATCCT 60.181 52.174 0.00 0.00 41.55 3.24
4859 5061 3.166679 GGATAGAGGGACTGTGGTATCC 58.833 54.545 0.00 0.00 41.55 2.59
4860 5062 3.845860 TGGATAGAGGGACTGTGGTATC 58.154 50.000 0.00 0.00 41.55 2.24
4861 5063 3.993658 TGGATAGAGGGACTGTGGTAT 57.006 47.619 0.00 0.00 41.55 2.73
4862 5064 3.438078 GGATGGATAGAGGGACTGTGGTA 60.438 52.174 0.00 0.00 41.55 3.25
4863 5065 2.683768 GATGGATAGAGGGACTGTGGT 58.316 52.381 0.00 0.00 41.55 4.16
4864 5066 1.974236 GGATGGATAGAGGGACTGTGG 59.026 57.143 0.00 0.00 41.55 4.17
4865 5067 2.682594 TGGATGGATAGAGGGACTGTG 58.317 52.381 0.00 0.00 41.55 3.66
4866 5068 3.041946 GTTGGATGGATAGAGGGACTGT 58.958 50.000 0.00 0.00 41.55 3.55
4867 5069 2.370189 GGTTGGATGGATAGAGGGACTG 59.630 54.545 0.00 0.00 41.55 3.51
4869 5071 2.104963 GTGGTTGGATGGATAGAGGGAC 59.895 54.545 0.00 0.00 0.00 4.46
4870 5072 2.293519 TGTGGTTGGATGGATAGAGGGA 60.294 50.000 0.00 0.00 0.00 4.20
4871 5073 2.105477 CTGTGGTTGGATGGATAGAGGG 59.895 54.545 0.00 0.00 0.00 4.30
4872 5074 2.105477 CCTGTGGTTGGATGGATAGAGG 59.895 54.545 0.00 0.00 0.00 3.69
4873 5075 2.774234 ACCTGTGGTTGGATGGATAGAG 59.226 50.000 0.00 0.00 27.29 2.43
4874 5076 2.845659 ACCTGTGGTTGGATGGATAGA 58.154 47.619 0.00 0.00 27.29 1.98
4875 5077 3.652057 AACCTGTGGTTGGATGGATAG 57.348 47.619 0.71 0.00 45.07 2.08
4876 5078 5.725551 ATTAACCTGTGGTTGGATGGATA 57.274 39.130 11.78 0.00 46.35 2.59
4877 5079 4.608170 ATTAACCTGTGGTTGGATGGAT 57.392 40.909 11.78 0.00 46.35 3.41
4878 5080 4.202620 TGAATTAACCTGTGGTTGGATGGA 60.203 41.667 11.78 0.00 46.35 3.41
4879 5081 4.085733 TGAATTAACCTGTGGTTGGATGG 58.914 43.478 11.78 0.00 46.35 3.51
4880 5082 5.394443 CCATGAATTAACCTGTGGTTGGATG 60.394 44.000 11.78 6.63 46.35 3.51
4881 5083 4.711355 CCATGAATTAACCTGTGGTTGGAT 59.289 41.667 11.78 3.88 46.35 3.41
4882 5084 4.085733 CCATGAATTAACCTGTGGTTGGA 58.914 43.478 11.78 1.80 46.35 3.53
4883 5085 3.831911 ACCATGAATTAACCTGTGGTTGG 59.168 43.478 11.78 6.12 46.35 3.77
4884 5086 4.321899 CCACCATGAATTAACCTGTGGTTG 60.322 45.833 11.78 0.00 46.35 3.77
4886 5088 3.430453 CCACCATGAATTAACCTGTGGT 58.570 45.455 0.00 0.00 40.38 4.16
4887 5089 2.760092 CCCACCATGAATTAACCTGTGG 59.240 50.000 0.00 0.00 41.07 4.17
4888 5090 3.696045 TCCCACCATGAATTAACCTGTG 58.304 45.455 0.00 0.00 0.00 3.66
4889 5091 4.280819 CATCCCACCATGAATTAACCTGT 58.719 43.478 0.00 0.00 0.00 4.00
4890 5092 3.068590 GCATCCCACCATGAATTAACCTG 59.931 47.826 0.00 0.00 0.00 4.00
4891 5093 3.299503 GCATCCCACCATGAATTAACCT 58.700 45.455 0.00 0.00 0.00 3.50
4892 5094 3.030291 TGCATCCCACCATGAATTAACC 58.970 45.455 0.00 0.00 0.00 2.85
4893 5095 4.942761 ATGCATCCCACCATGAATTAAC 57.057 40.909 0.00 0.00 0.00 2.01
4894 5096 5.424573 TGAAATGCATCCCACCATGAATTAA 59.575 36.000 0.00 0.00 31.58 1.40
4895 5097 4.961099 TGAAATGCATCCCACCATGAATTA 59.039 37.500 0.00 0.00 31.58 1.40
4896 5098 3.775866 TGAAATGCATCCCACCATGAATT 59.224 39.130 0.00 0.00 33.91 2.17
4897 5099 3.376636 TGAAATGCATCCCACCATGAAT 58.623 40.909 0.00 0.00 0.00 2.57
4898 5100 2.761767 CTGAAATGCATCCCACCATGAA 59.238 45.455 0.00 0.00 0.00 2.57
4899 5101 2.380941 CTGAAATGCATCCCACCATGA 58.619 47.619 0.00 0.00 0.00 3.07
4900 5102 1.411246 CCTGAAATGCATCCCACCATG 59.589 52.381 0.00 0.00 0.00 3.66
4901 5103 1.288633 TCCTGAAATGCATCCCACCAT 59.711 47.619 0.00 0.00 0.00 3.55
4902 5104 0.703488 TCCTGAAATGCATCCCACCA 59.297 50.000 0.00 0.00 0.00 4.17
4903 5105 1.684983 CATCCTGAAATGCATCCCACC 59.315 52.381 0.00 0.00 0.00 4.61
4904 5106 2.658285 TCATCCTGAAATGCATCCCAC 58.342 47.619 0.00 0.00 0.00 4.61
4905 5107 3.385314 TTCATCCTGAAATGCATCCCA 57.615 42.857 0.00 0.00 32.71 4.37
4906 5108 3.640029 ACATTCATCCTGAAATGCATCCC 59.360 43.478 0.00 0.00 40.12 3.85
4907 5109 4.931661 ACATTCATCCTGAAATGCATCC 57.068 40.909 0.00 0.00 40.12 3.51



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.