Multiple sequence alignment - TraesCS3D01G166000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G166000 chr3D 100.000 4945 0 0 1 4945 138003231 138008175 0.000000e+00 9132.0
1 TraesCS3D01G166000 chr3D 92.179 179 10 2 517 691 35442740 35442562 2.960000e-62 250.0
2 TraesCS3D01G166000 chr3B 91.852 1571 73 23 900 2453 201036934 201038466 0.000000e+00 2141.0
3 TraesCS3D01G166000 chr3B 94.176 910 36 8 3232 4130 201038406 201039309 0.000000e+00 1371.0
4 TraesCS3D01G166000 chr3B 87.516 793 69 7 4177 4945 201039308 201040094 0.000000e+00 889.0
5 TraesCS3D01G166000 chr3B 82.959 757 96 23 2459 3207 510000541 509999810 0.000000e+00 652.0
6 TraesCS3D01G166000 chr3B 92.697 178 9 2 698 872 485702918 485703094 2.280000e-63 254.0
7 TraesCS3D01G166000 chr3B 91.758 182 10 3 523 699 485702778 485702959 1.060000e-61 248.0
8 TraesCS3D01G166000 chr3B 82.081 173 21 7 2470 2641 66796798 66796635 6.670000e-29 139.0
9 TraesCS3D01G166000 chr3B 89.091 55 2 4 85 137 826496759 826496811 1.150000e-06 65.8
10 TraesCS3D01G166000 chr3B 89.091 55 2 4 85 137 826566933 826566985 1.150000e-06 65.8
11 TraesCS3D01G166000 chr3B 89.091 55 2 4 85 137 826570717 826570769 1.150000e-06 65.8
12 TraesCS3D01G166000 chr3A 91.771 960 37 15 947 1881 156124558 156125500 0.000000e+00 1297.0
13 TraesCS3D01G166000 chr3A 93.759 705 29 6 3222 3912 156126150 156126853 0.000000e+00 1044.0
14 TraesCS3D01G166000 chr3A 93.621 580 30 4 1879 2458 156125534 156126106 0.000000e+00 859.0
15 TraesCS3D01G166000 chr3A 91.852 135 10 1 3912 4045 156132763 156132897 2.350000e-43 187.0
16 TraesCS3D01G166000 chr3A 94.521 73 2 2 3222 3293 156126090 156126161 1.460000e-20 111.0
17 TraesCS3D01G166000 chr3A 91.379 58 4 1 898 954 156124096 156124153 1.480000e-10 78.7
18 TraesCS3D01G166000 chr7B 90.885 757 53 12 2461 3209 546937492 546938240 0.000000e+00 1002.0
19 TraesCS3D01G166000 chr7B 88.000 175 15 5 241 411 710105047 710104875 8.390000e-48 202.0
20 TraesCS3D01G166000 chr7B 88.000 175 15 5 241 411 710116656 710116484 8.390000e-48 202.0
21 TraesCS3D01G166000 chr7B 88.000 175 15 5 241 411 710127756 710127584 8.390000e-48 202.0
22 TraesCS3D01G166000 chr7B 76.471 170 40 0 4258 4427 60693186 60693017 5.270000e-15 93.5
23 TraesCS3D01G166000 chr2B 87.368 760 76 17 2462 3209 771329134 771328383 0.000000e+00 854.0
24 TraesCS3D01G166000 chr2B 86.005 786 83 22 2441 3209 771321023 771320248 0.000000e+00 817.0
25 TraesCS3D01G166000 chr2B 90.659 182 14 1 694 872 754287227 754287408 6.400000e-59 239.0
26 TraesCS3D01G166000 chr2B 75.987 304 53 14 4292 4589 251378128 251378417 6.670000e-29 139.0
27 TraesCS3D01G166000 chr7D 86.632 763 81 14 2461 3210 604592705 604593459 0.000000e+00 824.0
28 TraesCS3D01G166000 chr7D 77.977 613 94 24 4361 4943 629822563 629821962 3.660000e-91 346.0
29 TraesCS3D01G166000 chr7D 77.435 616 103 25 4344 4945 140880742 140881335 7.930000e-88 335.0
30 TraesCS3D01G166000 chr7D 78.989 376 52 9 4315 4667 74959799 74959428 1.070000e-56 231.0
31 TraesCS3D01G166000 chr4B 80.362 718 109 16 4258 4945 673197147 673197862 2.640000e-142 516.0
32 TraesCS3D01G166000 chr4B 83.784 148 13 9 2456 2596 404116816 404116959 4.020000e-26 130.0
33 TraesCS3D01G166000 chr4B 82.716 162 11 11 2462 2616 574676020 574676171 1.440000e-25 128.0
34 TraesCS3D01G166000 chr1B 80.588 680 101 21 2534 3207 334237178 334236524 3.440000e-136 496.0
35 TraesCS3D01G166000 chr1B 86.413 184 21 3 223 403 317434603 317434421 1.090000e-46 198.0
36 TraesCS3D01G166000 chr2A 79.021 715 111 14 4256 4945 727012829 727013529 2.100000e-123 453.0
37 TraesCS3D01G166000 chr2A 79.123 479 97 2 2733 3209 755755838 755755361 1.330000e-85 327.0
38 TraesCS3D01G166000 chr2A 90.323 186 14 2 695 876 564850000 564849815 1.780000e-59 241.0
39 TraesCS3D01G166000 chr2A 90.857 175 13 1 520 691 240440853 240441027 1.070000e-56 231.0
40 TraesCS3D01G166000 chr2A 89.071 183 14 4 514 691 564850146 564849965 6.440000e-54 222.0
41 TraesCS3D01G166000 chr2A 90.361 166 14 1 241 404 2922130 2921965 3.000000e-52 217.0
42 TraesCS3D01G166000 chr2A 87.402 127 13 2 2462 2585 8407691 8407565 5.160000e-30 143.0
43 TraesCS3D01G166000 chr1A 78.762 711 114 21 4260 4945 476898397 476899095 4.540000e-120 442.0
44 TraesCS3D01G166000 chr5A 79.936 623 91 16 4342 4945 384217417 384218024 1.270000e-115 427.0
45 TraesCS3D01G166000 chr5A 79.036 477 96 4 2733 3207 619347218 619347692 1.720000e-84 324.0
46 TraesCS3D01G166000 chr5A 89.024 164 16 1 241 402 115664843 115664680 8.390000e-48 202.0
47 TraesCS3D01G166000 chr5A 88.235 170 16 3 241 406 573807985 573808154 3.020000e-47 200.0
48 TraesCS3D01G166000 chr5A 86.413 184 21 3 223 402 502388228 502388411 1.090000e-46 198.0
49 TraesCS3D01G166000 chr1D 78.011 714 119 15 4260 4945 376610448 376611151 9.900000e-112 414.0
50 TraesCS3D01G166000 chr1D 93.407 182 8 2 522 699 101985780 101985599 2.930000e-67 267.0
51 TraesCS3D01G166000 chr1D 93.333 180 9 1 694 870 101985644 101985465 3.800000e-66 263.0
52 TraesCS3D01G166000 chr1D 90.055 181 15 1 695 872 361035381 361035201 1.070000e-56 231.0
53 TraesCS3D01G166000 chr2D 78.756 659 105 18 4315 4945 318425349 318426000 4.610000e-110 409.0
54 TraesCS3D01G166000 chr2D 86.121 281 35 3 4665 4943 592506422 592506700 2.890000e-77 300.0
55 TraesCS3D01G166000 chr2D 91.327 196 6 6 512 704 192408369 192408556 1.770000e-64 257.0
56 TraesCS3D01G166000 chr2D 91.803 183 9 3 694 872 192408510 192408690 2.960000e-62 250.0
57 TraesCS3D01G166000 chr2D 75.969 387 64 16 4254 4615 113650974 113651356 6.580000e-39 172.0
58 TraesCS3D01G166000 chr6B 81.944 504 59 13 1964 2458 644432375 644431895 9.970000e-107 398.0
59 TraesCS3D01G166000 chr6B 78.750 480 91 9 2738 3210 525060278 525059803 1.340000e-80 311.0
60 TraesCS3D01G166000 chr6B 84.564 149 8 13 2457 2596 94064753 94064895 3.110000e-27 134.0
61 TraesCS3D01G166000 chr4D 78.947 475 95 4 2740 3210 17849593 17850066 7.990000e-83 318.0
62 TraesCS3D01G166000 chr5D 83.959 293 44 3 4653 4945 327210836 327210547 1.360000e-70 278.0
63 TraesCS3D01G166000 chr5D 93.478 184 8 2 520 699 137860370 137860553 2.270000e-68 270.0
64 TraesCS3D01G166000 chr5D 93.407 182 9 1 694 872 137860508 137860689 2.930000e-67 267.0
65 TraesCS3D01G166000 chr5D 76.179 424 62 24 4254 4663 327211521 327211123 2.350000e-43 187.0
66 TraesCS3D01G166000 chrUn 91.758 182 12 1 694 872 46212774 46212593 2.960000e-62 250.0
67 TraesCS3D01G166000 chrUn 89.189 185 16 2 695 875 297722191 297722007 1.380000e-55 228.0
68 TraesCS3D01G166000 chrUn 89.091 55 2 4 85 137 264661173 264661225 1.150000e-06 65.8
69 TraesCS3D01G166000 chrUn 89.091 55 2 4 85 137 303332814 303332866 1.150000e-06 65.8
70 TraesCS3D01G166000 chrUn 89.091 55 2 4 85 137 401361206 401361258 1.150000e-06 65.8
71 TraesCS3D01G166000 chr7A 90.625 192 11 3 517 704 344662135 344662323 1.060000e-61 248.0
72 TraesCS3D01G166000 chr6D 90.608 181 13 2 514 691 370088043 370087864 2.300000e-58 237.0
73 TraesCS3D01G166000 chr6D 89.222 167 13 2 241 403 81811705 81811540 2.330000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G166000 chr3D 138003231 138008175 4944 False 9132.00 9132 100.000000 1 4945 1 chr3D.!!$F1 4944
1 TraesCS3D01G166000 chr3B 201036934 201040094 3160 False 1467.00 2141 91.181333 900 4945 3 chr3B.!!$F2 4045
2 TraesCS3D01G166000 chr3B 509999810 510000541 731 True 652.00 652 82.959000 2459 3207 1 chr3B.!!$R2 748
3 TraesCS3D01G166000 chr3A 156124096 156126853 2757 False 677.94 1297 93.010200 898 3912 5 chr3A.!!$F2 3014
4 TraesCS3D01G166000 chr7B 546937492 546938240 748 False 1002.00 1002 90.885000 2461 3209 1 chr7B.!!$F1 748
5 TraesCS3D01G166000 chr2B 771328383 771329134 751 True 854.00 854 87.368000 2462 3209 1 chr2B.!!$R2 747
6 TraesCS3D01G166000 chr2B 771320248 771321023 775 True 817.00 817 86.005000 2441 3209 1 chr2B.!!$R1 768
7 TraesCS3D01G166000 chr7D 604592705 604593459 754 False 824.00 824 86.632000 2461 3210 1 chr7D.!!$F2 749
8 TraesCS3D01G166000 chr7D 629821962 629822563 601 True 346.00 346 77.977000 4361 4943 1 chr7D.!!$R2 582
9 TraesCS3D01G166000 chr7D 140880742 140881335 593 False 335.00 335 77.435000 4344 4945 1 chr7D.!!$F1 601
10 TraesCS3D01G166000 chr4B 673197147 673197862 715 False 516.00 516 80.362000 4258 4945 1 chr4B.!!$F3 687
11 TraesCS3D01G166000 chr1B 334236524 334237178 654 True 496.00 496 80.588000 2534 3207 1 chr1B.!!$R2 673
12 TraesCS3D01G166000 chr2A 727012829 727013529 700 False 453.00 453 79.021000 4256 4945 1 chr2A.!!$F2 689
13 TraesCS3D01G166000 chr1A 476898397 476899095 698 False 442.00 442 78.762000 4260 4945 1 chr1A.!!$F1 685
14 TraesCS3D01G166000 chr5A 384217417 384218024 607 False 427.00 427 79.936000 4342 4945 1 chr5A.!!$F1 603
15 TraesCS3D01G166000 chr1D 376610448 376611151 703 False 414.00 414 78.011000 4260 4945 1 chr1D.!!$F1 685
16 TraesCS3D01G166000 chr2D 318425349 318426000 651 False 409.00 409 78.756000 4315 4945 1 chr2D.!!$F2 630
17 TraesCS3D01G166000 chr5D 327210547 327211521 974 True 232.50 278 80.069000 4254 4945 2 chr5D.!!$R1 691

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
594 595 0.036732 GCACATGGTGAGTGGAGGAA 59.963 55.0 0.00 0.0 37.46 3.36 F
1618 2057 0.179078 CTCAGCTGAGACATGGGAGC 60.179 60.0 35.69 0.0 44.74 4.70 F
2305 2790 0.447801 CCAGCGGCATGTGAACTTAC 59.552 55.0 1.45 0.0 0.00 2.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2013 2498 0.111061 ACAGGGCAGTGCAGAATCAA 59.889 50.0 18.61 0.0 0.00 2.57 R
3218 3735 0.540133 TGTGCACAATGGAGGCATGT 60.540 50.0 19.28 0.0 40.05 3.21 R
4140 4800 0.179056 TCTTTCGGCGGATTCATCCC 60.179 55.0 7.21 0.0 44.24 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.243426 ACCATGCAAATTTATGTACGTCC 57.757 39.130 0.00 0.00 0.00 4.79
23 24 4.947388 ACCATGCAAATTTATGTACGTCCT 59.053 37.500 0.00 0.00 0.00 3.85
24 25 5.417580 ACCATGCAAATTTATGTACGTCCTT 59.582 36.000 0.00 0.00 0.00 3.36
25 26 6.071616 ACCATGCAAATTTATGTACGTCCTTT 60.072 34.615 0.00 0.00 0.00 3.11
26 27 6.811170 CCATGCAAATTTATGTACGTCCTTTT 59.189 34.615 0.00 0.00 0.00 2.27
27 28 7.330700 CCATGCAAATTTATGTACGTCCTTTTT 59.669 33.333 0.00 0.00 0.00 1.94
48 49 7.618964 TTTTTAGTTAGCTAGATGATACGCG 57.381 36.000 3.53 3.53 0.00 6.01
49 50 5.936686 TTAGTTAGCTAGATGATACGCGT 57.063 39.130 19.17 19.17 0.00 6.01
50 51 4.148563 AGTTAGCTAGATGATACGCGTG 57.851 45.455 24.59 2.81 0.00 5.34
51 52 3.564644 AGTTAGCTAGATGATACGCGTGT 59.435 43.478 24.59 17.12 0.00 4.49
52 53 4.036498 AGTTAGCTAGATGATACGCGTGTT 59.964 41.667 24.59 9.44 0.00 3.32
53 54 2.732366 AGCTAGATGATACGCGTGTTG 58.268 47.619 24.59 4.35 0.00 3.33
54 55 1.190323 GCTAGATGATACGCGTGTTGC 59.810 52.381 24.59 8.75 41.47 4.17
55 56 1.787155 CTAGATGATACGCGTGTTGCC 59.213 52.381 24.59 8.34 42.08 4.52
56 57 1.145759 AGATGATACGCGTGTTGCCG 61.146 55.000 24.59 0.00 42.08 5.69
64 65 2.551270 CGTGTTGCCGCAGAAGTC 59.449 61.111 0.00 0.00 0.00 3.01
65 66 2.243957 CGTGTTGCCGCAGAAGTCA 61.244 57.895 0.00 0.00 0.00 3.41
66 67 1.571460 GTGTTGCCGCAGAAGTCAG 59.429 57.895 0.00 0.00 0.00 3.51
67 68 1.146041 TGTTGCCGCAGAAGTCAGT 59.854 52.632 0.00 0.00 0.00 3.41
68 69 0.463654 TGTTGCCGCAGAAGTCAGTT 60.464 50.000 0.00 0.00 0.00 3.16
69 70 0.040958 GTTGCCGCAGAAGTCAGTTG 60.041 55.000 0.00 0.00 0.00 3.16
70 71 1.785041 TTGCCGCAGAAGTCAGTTGC 61.785 55.000 0.00 0.00 34.58 4.17
71 72 2.253758 GCCGCAGAAGTCAGTTGCA 61.254 57.895 0.00 0.00 37.69 4.08
72 73 1.580845 GCCGCAGAAGTCAGTTGCAT 61.581 55.000 0.00 0.00 37.69 3.96
73 74 0.877071 CCGCAGAAGTCAGTTGCATT 59.123 50.000 0.00 0.00 37.69 3.56
74 75 1.400629 CCGCAGAAGTCAGTTGCATTG 60.401 52.381 0.00 0.00 37.69 2.82
75 76 1.265095 CGCAGAAGTCAGTTGCATTGT 59.735 47.619 0.00 0.00 37.69 2.71
76 77 2.480037 CGCAGAAGTCAGTTGCATTGTA 59.520 45.455 0.00 0.00 37.69 2.41
77 78 3.125829 CGCAGAAGTCAGTTGCATTGTAT 59.874 43.478 0.00 0.00 37.69 2.29
78 79 4.378770 CGCAGAAGTCAGTTGCATTGTATT 60.379 41.667 0.00 0.00 37.69 1.89
79 80 5.091431 GCAGAAGTCAGTTGCATTGTATTC 58.909 41.667 0.00 0.00 37.75 1.75
80 81 5.335113 GCAGAAGTCAGTTGCATTGTATTCA 60.335 40.000 14.61 0.00 37.75 2.57
81 82 6.082338 CAGAAGTCAGTTGCATTGTATTCAC 58.918 40.000 14.61 0.00 0.00 3.18
82 83 6.000219 AGAAGTCAGTTGCATTGTATTCACT 59.000 36.000 14.61 1.26 0.00 3.41
83 84 5.618056 AGTCAGTTGCATTGTATTCACTG 57.382 39.130 4.83 4.83 0.00 3.66
84 85 5.308014 AGTCAGTTGCATTGTATTCACTGA 58.692 37.500 9.05 9.05 0.00 3.41
85 86 5.764686 AGTCAGTTGCATTGTATTCACTGAA 59.235 36.000 13.60 0.00 35.21 3.02
86 87 6.262944 AGTCAGTTGCATTGTATTCACTGAAA 59.737 34.615 13.60 0.00 35.21 2.69
87 88 7.040201 AGTCAGTTGCATTGTATTCACTGAAAT 60.040 33.333 13.60 5.08 35.21 2.17
88 89 8.236586 GTCAGTTGCATTGTATTCACTGAAATA 58.763 33.333 13.60 0.00 35.21 1.40
89 90 8.959548 TCAGTTGCATTGTATTCACTGAAATAT 58.040 29.630 10.39 0.00 31.17 1.28
90 91 9.577110 CAGTTGCATTGTATTCACTGAAATATT 57.423 29.630 5.19 0.00 27.30 1.28
216 217 2.117858 TGCATGGTGGCATGTGGT 59.882 55.556 0.00 0.00 39.25 4.16
217 218 2.276853 TGCATGGTGGCATGTGGTG 61.277 57.895 0.00 0.00 39.25 4.17
218 219 3.009192 GCATGGTGGCATGTGGTGG 62.009 63.158 0.00 0.00 35.16 4.61
219 220 1.607178 CATGGTGGCATGTGGTGGT 60.607 57.895 0.00 0.00 0.00 4.16
220 221 1.607178 ATGGTGGCATGTGGTGGTG 60.607 57.895 0.00 0.00 0.00 4.17
221 222 2.990967 GGTGGCATGTGGTGGTGG 60.991 66.667 0.00 0.00 0.00 4.61
222 223 2.203480 GTGGCATGTGGTGGTGGT 60.203 61.111 0.00 0.00 0.00 4.16
223 224 1.832167 GTGGCATGTGGTGGTGGTT 60.832 57.895 0.00 0.00 0.00 3.67
224 225 1.530419 TGGCATGTGGTGGTGGTTC 60.530 57.895 0.00 0.00 0.00 3.62
225 226 1.228552 GGCATGTGGTGGTGGTTCT 60.229 57.895 0.00 0.00 0.00 3.01
226 227 1.244019 GGCATGTGGTGGTGGTTCTC 61.244 60.000 0.00 0.00 0.00 2.87
227 228 0.537143 GCATGTGGTGGTGGTTCTCA 60.537 55.000 0.00 0.00 0.00 3.27
228 229 1.979855 CATGTGGTGGTGGTTCTCAA 58.020 50.000 0.00 0.00 0.00 3.02
229 230 2.517959 CATGTGGTGGTGGTTCTCAAT 58.482 47.619 0.00 0.00 0.00 2.57
230 231 3.684908 CATGTGGTGGTGGTTCTCAATA 58.315 45.455 0.00 0.00 0.00 1.90
231 232 4.272489 CATGTGGTGGTGGTTCTCAATAT 58.728 43.478 0.00 0.00 0.00 1.28
232 233 4.380843 TGTGGTGGTGGTTCTCAATATT 57.619 40.909 0.00 0.00 0.00 1.28
233 234 5.506730 TGTGGTGGTGGTTCTCAATATTA 57.493 39.130 0.00 0.00 0.00 0.98
234 235 5.496556 TGTGGTGGTGGTTCTCAATATTAG 58.503 41.667 0.00 0.00 0.00 1.73
235 236 5.013704 TGTGGTGGTGGTTCTCAATATTAGT 59.986 40.000 0.00 0.00 0.00 2.24
236 237 5.944007 GTGGTGGTGGTTCTCAATATTAGTT 59.056 40.000 0.00 0.00 0.00 2.24
237 238 7.107542 GTGGTGGTGGTTCTCAATATTAGTTA 58.892 38.462 0.00 0.00 0.00 2.24
238 239 7.608761 GTGGTGGTGGTTCTCAATATTAGTTAA 59.391 37.037 0.00 0.00 0.00 2.01
239 240 7.608761 TGGTGGTGGTTCTCAATATTAGTTAAC 59.391 37.037 0.00 0.00 0.00 2.01
240 241 7.608761 GGTGGTGGTTCTCAATATTAGTTAACA 59.391 37.037 8.61 0.00 0.00 2.41
241 242 8.448615 GTGGTGGTTCTCAATATTAGTTAACAC 58.551 37.037 8.61 0.00 0.00 3.32
242 243 8.380099 TGGTGGTTCTCAATATTAGTTAACACT 58.620 33.333 8.61 0.00 36.99 3.55
243 244 8.880750 GGTGGTTCTCAATATTAGTTAACACTC 58.119 37.037 8.61 0.00 34.06 3.51
244 245 8.880750 GTGGTTCTCAATATTAGTTAACACTCC 58.119 37.037 8.61 0.00 34.06 3.85
245 246 8.044908 TGGTTCTCAATATTAGTTAACACTCCC 58.955 37.037 8.61 0.00 34.06 4.30
246 247 8.265764 GGTTCTCAATATTAGTTAACACTCCCT 58.734 37.037 8.61 0.00 34.06 4.20
247 248 9.315525 GTTCTCAATATTAGTTAACACTCCCTC 57.684 37.037 8.61 0.00 34.06 4.30
248 249 8.840200 TCTCAATATTAGTTAACACTCCCTCT 57.160 34.615 8.61 0.00 34.06 3.69
249 250 8.696374 TCTCAATATTAGTTAACACTCCCTCTG 58.304 37.037 8.61 0.00 34.06 3.35
250 251 8.375493 TCAATATTAGTTAACACTCCCTCTGT 57.625 34.615 8.61 0.00 34.06 3.41
251 252 8.822805 TCAATATTAGTTAACACTCCCTCTGTT 58.177 33.333 8.61 0.00 35.92 3.16
252 253 9.449719 CAATATTAGTTAACACTCCCTCTGTTT 57.550 33.333 8.61 0.00 33.79 2.83
253 254 9.668497 AATATTAGTTAACACTCCCTCTGTTTC 57.332 33.333 8.61 0.00 33.79 2.78
254 255 6.742559 TTAGTTAACACTCCCTCTGTTTCT 57.257 37.500 8.61 0.00 33.79 2.52
255 256 7.844493 TTAGTTAACACTCCCTCTGTTTCTA 57.156 36.000 8.61 0.00 33.79 2.10
256 257 6.742559 AGTTAACACTCCCTCTGTTTCTAA 57.257 37.500 8.61 0.00 33.79 2.10
257 258 7.133133 AGTTAACACTCCCTCTGTTTCTAAA 57.867 36.000 8.61 0.00 33.79 1.85
258 259 7.746703 AGTTAACACTCCCTCTGTTTCTAAAT 58.253 34.615 8.61 0.00 33.79 1.40
259 260 8.877195 AGTTAACACTCCCTCTGTTTCTAAATA 58.123 33.333 8.61 0.00 33.79 1.40
260 261 9.668497 GTTAACACTCCCTCTGTTTCTAAATAT 57.332 33.333 0.00 0.00 33.79 1.28
263 264 8.567285 ACACTCCCTCTGTTTCTAAATATTTG 57.433 34.615 11.05 1.65 0.00 2.32
264 265 8.164070 ACACTCCCTCTGTTTCTAAATATTTGT 58.836 33.333 11.05 0.00 0.00 2.83
265 266 8.669243 CACTCCCTCTGTTTCTAAATATTTGTC 58.331 37.037 11.05 0.00 0.00 3.18
266 267 7.549488 ACTCCCTCTGTTTCTAAATATTTGTCG 59.451 37.037 11.05 0.00 0.00 4.35
267 268 7.391620 TCCCTCTGTTTCTAAATATTTGTCGT 58.608 34.615 11.05 0.00 0.00 4.34
268 269 7.881232 TCCCTCTGTTTCTAAATATTTGTCGTT 59.119 33.333 11.05 0.00 0.00 3.85
269 270 8.512138 CCCTCTGTTTCTAAATATTTGTCGTTT 58.488 33.333 11.05 0.00 0.00 3.60
270 271 9.893305 CCTCTGTTTCTAAATATTTGTCGTTTT 57.107 29.630 11.05 0.00 0.00 2.43
287 288 9.710979 TTGTCGTTTTAGAGATTTTAACAAGTG 57.289 29.630 0.00 0.00 0.00 3.16
288 289 9.100554 TGTCGTTTTAGAGATTTTAACAAGTGA 57.899 29.630 0.00 0.00 0.00 3.41
289 290 9.366513 GTCGTTTTAGAGATTTTAACAAGTGAC 57.633 33.333 0.00 0.00 0.00 3.67
290 291 9.321562 TCGTTTTAGAGATTTTAACAAGTGACT 57.678 29.630 0.00 0.00 0.00 3.41
343 344 9.261180 ACATTCTAAAATATGTCTACACATCCG 57.739 33.333 0.00 0.00 42.66 4.18
344 345 9.261180 CATTCTAAAATATGTCTACACATCCGT 57.739 33.333 0.00 0.00 42.66 4.69
347 348 9.908152 TCTAAAATATGTCTACACATCCGTATG 57.092 33.333 0.00 0.00 42.66 2.39
350 351 9.692749 AAAATATGTCTACACATCCGTATGTAG 57.307 33.333 0.00 5.26 44.70 2.74
351 352 7.997773 ATATGTCTACACATCCGTATGTAGT 57.002 36.000 10.34 0.00 44.70 2.73
352 353 9.511272 AATATGTCTACACATCCGTATGTAGTA 57.489 33.333 10.34 0.00 44.70 1.82
353 354 6.856135 TGTCTACACATCCGTATGTAGTAG 57.144 41.667 16.96 16.96 44.70 2.57
354 355 6.351711 TGTCTACACATCCGTATGTAGTAGT 58.648 40.000 19.74 8.13 44.70 2.73
355 356 6.825213 TGTCTACACATCCGTATGTAGTAGTT 59.175 38.462 19.74 0.00 44.70 2.24
356 357 7.011763 TGTCTACACATCCGTATGTAGTAGTTC 59.988 40.741 19.74 16.32 44.70 3.01
357 358 7.011763 GTCTACACATCCGTATGTAGTAGTTCA 59.988 40.741 19.74 7.75 44.70 3.18
358 359 6.710597 ACACATCCGTATGTAGTAGTTCAT 57.289 37.500 0.00 0.00 44.70 2.57
359 360 7.108841 ACACATCCGTATGTAGTAGTTCATT 57.891 36.000 0.00 0.00 44.70 2.57
360 361 7.553334 ACACATCCGTATGTAGTAGTTCATTT 58.447 34.615 0.00 0.00 44.70 2.32
361 362 7.491372 ACACATCCGTATGTAGTAGTTCATTTG 59.509 37.037 0.00 0.00 44.70 2.32
362 363 7.704899 CACATCCGTATGTAGTAGTTCATTTGA 59.295 37.037 0.00 0.00 44.70 2.69
363 364 8.255206 ACATCCGTATGTAGTAGTTCATTTGAA 58.745 33.333 0.00 0.00 44.66 2.69
364 365 9.093970 CATCCGTATGTAGTAGTTCATTTGAAA 57.906 33.333 0.00 0.00 35.58 2.69
365 366 9.832445 ATCCGTATGTAGTAGTTCATTTGAAAT 57.168 29.630 0.00 0.00 35.58 2.17
366 367 9.309516 TCCGTATGTAGTAGTTCATTTGAAATC 57.690 33.333 0.00 0.00 35.58 2.17
367 368 9.314321 CCGTATGTAGTAGTTCATTTGAAATCT 57.686 33.333 0.00 0.00 35.58 2.40
422 423 9.962783 GGAGTATTAACTAATATTGAGACACGT 57.037 33.333 0.00 0.00 35.56 4.49
431 432 9.745880 ACTAATATTGAGACACGTATAACCTTG 57.254 33.333 0.00 0.00 0.00 3.61
432 433 7.478520 AATATTGAGACACGTATAACCTTGC 57.521 36.000 0.00 0.00 0.00 4.01
433 434 3.945981 TGAGACACGTATAACCTTGCA 57.054 42.857 0.00 0.00 0.00 4.08
434 435 4.260139 TGAGACACGTATAACCTTGCAA 57.740 40.909 0.00 0.00 0.00 4.08
435 436 4.633175 TGAGACACGTATAACCTTGCAAA 58.367 39.130 0.00 0.00 0.00 3.68
436 437 5.057819 TGAGACACGTATAACCTTGCAAAA 58.942 37.500 0.00 0.00 0.00 2.44
437 438 5.527951 TGAGACACGTATAACCTTGCAAAAA 59.472 36.000 0.00 0.00 0.00 1.94
499 500 8.673456 AAGGAGGGAGTATATAATCTCTTTCC 57.327 38.462 13.57 11.21 30.18 3.13
500 501 7.193338 AGGAGGGAGTATATAATCTCTTTCCC 58.807 42.308 13.57 10.36 42.68 3.97
501 502 6.960542 GGAGGGAGTATATAATCTCTTTCCCA 59.039 42.308 13.57 0.00 44.37 4.37
502 503 7.458170 GGAGGGAGTATATAATCTCTTTCCCAA 59.542 40.741 13.57 0.00 44.37 4.12
503 504 8.814448 AGGGAGTATATAATCTCTTTCCCAAA 57.186 34.615 6.76 0.00 44.37 3.28
504 505 9.237706 AGGGAGTATATAATCTCTTTCCCAAAA 57.762 33.333 6.76 0.00 44.37 2.44
505 506 9.862149 GGGAGTATATAATCTCTTTCCCAAAAA 57.138 33.333 9.85 0.00 42.08 1.94
529 530 8.574309 AAAAAGGAGAAGATGATATACTCCCT 57.426 34.615 0.00 0.00 45.53 4.20
530 531 7.790782 AAAGGAGAAGATGATATACTCCCTC 57.209 40.000 0.00 0.00 45.53 4.30
531 532 6.734918 AGGAGAAGATGATATACTCCCTCT 57.265 41.667 0.00 0.00 45.53 3.69
532 533 7.114849 AGGAGAAGATGATATACTCCCTCTT 57.885 40.000 0.00 0.00 45.53 2.85
533 534 7.543755 AGGAGAAGATGATATACTCCCTCTTT 58.456 38.462 0.00 0.00 45.53 2.52
534 535 8.016054 AGGAGAAGATGATATACTCCCTCTTTT 58.984 37.037 0.00 0.00 45.53 2.27
535 536 8.655901 GGAGAAGATGATATACTCCCTCTTTTT 58.344 37.037 0.00 0.00 40.58 1.94
536 537 9.705290 GAGAAGATGATATACTCCCTCTTTTTC 57.295 37.037 0.00 0.00 29.63 2.29
537 538 9.218525 AGAAGATGATATACTCCCTCTTTTTCA 57.781 33.333 0.00 0.00 29.63 2.69
538 539 9.487790 GAAGATGATATACTCCCTCTTTTTCAG 57.512 37.037 0.00 0.00 29.63 3.02
539 540 8.560124 AGATGATATACTCCCTCTTTTTCAGT 57.440 34.615 0.00 0.00 0.00 3.41
540 541 8.997734 AGATGATATACTCCCTCTTTTTCAGTT 58.002 33.333 0.00 0.00 0.00 3.16
541 542 9.620259 GATGATATACTCCCTCTTTTTCAGTTT 57.380 33.333 0.00 0.00 0.00 2.66
547 548 9.907229 ATACTCCCTCTTTTTCAGTTTATAAGG 57.093 33.333 0.00 0.00 0.00 2.69
548 549 6.659668 ACTCCCTCTTTTTCAGTTTATAAGGC 59.340 38.462 0.00 0.00 0.00 4.35
549 550 6.790319 TCCCTCTTTTTCAGTTTATAAGGCT 58.210 36.000 0.00 0.00 0.00 4.58
550 551 6.884836 TCCCTCTTTTTCAGTTTATAAGGCTC 59.115 38.462 0.00 0.00 0.00 4.70
551 552 6.659242 CCCTCTTTTTCAGTTTATAAGGCTCA 59.341 38.462 0.00 0.00 0.00 4.26
552 553 7.176690 CCCTCTTTTTCAGTTTATAAGGCTCAA 59.823 37.037 0.00 0.00 0.00 3.02
553 554 8.576442 CCTCTTTTTCAGTTTATAAGGCTCAAA 58.424 33.333 0.00 0.00 0.00 2.69
568 569 9.857656 ATAAGGCTCAAATCTAAAATCTCATCA 57.142 29.630 0.00 0.00 0.00 3.07
569 570 8.585471 AAGGCTCAAATCTAAAATCTCATCAA 57.415 30.769 0.00 0.00 0.00 2.57
570 571 7.994194 AGGCTCAAATCTAAAATCTCATCAAC 58.006 34.615 0.00 0.00 0.00 3.18
571 572 7.067981 AGGCTCAAATCTAAAATCTCATCAACC 59.932 37.037 0.00 0.00 0.00 3.77
572 573 7.148018 GGCTCAAATCTAAAATCTCATCAACCA 60.148 37.037 0.00 0.00 0.00 3.67
573 574 8.246180 GCTCAAATCTAAAATCTCATCAACCAA 58.754 33.333 0.00 0.00 0.00 3.67
574 575 9.784680 CTCAAATCTAAAATCTCATCAACCAAG 57.215 33.333 0.00 0.00 0.00 3.61
575 576 8.742777 TCAAATCTAAAATCTCATCAACCAAGG 58.257 33.333 0.00 0.00 0.00 3.61
576 577 6.705863 ATCTAAAATCTCATCAACCAAGGC 57.294 37.500 0.00 0.00 0.00 4.35
577 578 5.569355 TCTAAAATCTCATCAACCAAGGCA 58.431 37.500 0.00 0.00 0.00 4.75
578 579 4.525912 AAAATCTCATCAACCAAGGCAC 57.474 40.909 0.00 0.00 0.00 5.01
579 580 2.885135 ATCTCATCAACCAAGGCACA 57.115 45.000 0.00 0.00 0.00 4.57
580 581 2.885135 TCTCATCAACCAAGGCACAT 57.115 45.000 0.00 0.00 0.00 3.21
581 582 2.439409 TCTCATCAACCAAGGCACATG 58.561 47.619 0.00 0.00 0.00 3.21
587 588 4.828409 CCAAGGCACATGGTGAGT 57.172 55.556 0.00 0.00 43.04 3.41
588 589 2.260247 CCAAGGCACATGGTGAGTG 58.740 57.895 0.00 0.00 43.04 3.51
589 590 1.246056 CCAAGGCACATGGTGAGTGG 61.246 60.000 0.00 0.42 43.04 4.00
590 591 0.250858 CAAGGCACATGGTGAGTGGA 60.251 55.000 0.00 0.00 37.46 4.02
591 592 0.037303 AAGGCACATGGTGAGTGGAG 59.963 55.000 0.00 0.00 37.46 3.86
592 593 1.377725 GGCACATGGTGAGTGGAGG 60.378 63.158 0.00 0.00 37.46 4.30
593 594 1.679311 GCACATGGTGAGTGGAGGA 59.321 57.895 0.00 0.00 37.46 3.71
594 595 0.036732 GCACATGGTGAGTGGAGGAA 59.963 55.000 0.00 0.00 37.46 3.36
595 596 1.340405 GCACATGGTGAGTGGAGGAAT 60.340 52.381 0.00 0.00 37.46 3.01
596 597 2.362736 CACATGGTGAGTGGAGGAATG 58.637 52.381 0.00 0.00 35.23 2.67
597 598 1.988107 ACATGGTGAGTGGAGGAATGT 59.012 47.619 0.00 0.00 0.00 2.71
598 599 3.055167 CACATGGTGAGTGGAGGAATGTA 60.055 47.826 0.00 0.00 35.23 2.29
599 600 3.782523 ACATGGTGAGTGGAGGAATGTAT 59.217 43.478 0.00 0.00 0.00 2.29
600 601 4.141620 ACATGGTGAGTGGAGGAATGTATC 60.142 45.833 0.00 0.00 0.00 2.24
601 602 3.724478 TGGTGAGTGGAGGAATGTATCT 58.276 45.455 0.00 0.00 0.00 1.98
602 603 3.706594 TGGTGAGTGGAGGAATGTATCTC 59.293 47.826 0.00 0.00 0.00 2.75
603 604 3.243569 GGTGAGTGGAGGAATGTATCTCG 60.244 52.174 0.00 0.00 0.00 4.04
604 605 3.381908 GTGAGTGGAGGAATGTATCTCGT 59.618 47.826 0.00 0.00 0.00 4.18
605 606 4.579340 GTGAGTGGAGGAATGTATCTCGTA 59.421 45.833 0.00 0.00 0.00 3.43
606 607 4.579340 TGAGTGGAGGAATGTATCTCGTAC 59.421 45.833 0.00 0.00 0.00 3.67
607 608 4.794334 AGTGGAGGAATGTATCTCGTACT 58.206 43.478 0.00 0.00 34.27 2.73
608 609 5.202004 AGTGGAGGAATGTATCTCGTACTT 58.798 41.667 0.00 0.00 34.27 2.24
609 610 5.657302 AGTGGAGGAATGTATCTCGTACTTT 59.343 40.000 0.00 0.00 34.44 2.66
610 611 6.832384 AGTGGAGGAATGTATCTCGTACTTTA 59.168 38.462 0.00 0.00 32.58 1.85
611 612 6.916932 GTGGAGGAATGTATCTCGTACTTTAC 59.083 42.308 0.00 0.00 33.52 2.01
612 613 6.604396 TGGAGGAATGTATCTCGTACTTTACA 59.396 38.462 0.00 0.00 35.00 2.41
613 614 7.123098 TGGAGGAATGTATCTCGTACTTTACAA 59.877 37.037 0.00 0.00 35.00 2.41
614 615 7.977853 GGAGGAATGTATCTCGTACTTTACAAA 59.022 37.037 0.00 0.00 35.00 2.83
615 616 9.362539 GAGGAATGTATCTCGTACTTTACAAAA 57.637 33.333 0.00 0.00 35.00 2.44
616 617 9.148104 AGGAATGTATCTCGTACTTTACAAAAC 57.852 33.333 0.00 0.00 35.00 2.43
617 618 9.148104 GGAATGTATCTCGTACTTTACAAAACT 57.852 33.333 0.00 0.00 33.54 2.66
621 622 9.793252 TGTATCTCGTACTTTACAAAACTATCC 57.207 33.333 0.00 0.00 34.27 2.59
622 623 9.793252 GTATCTCGTACTTTACAAAACTATCCA 57.207 33.333 0.00 0.00 0.00 3.41
624 625 9.715121 ATCTCGTACTTTACAAAACTATCCAAA 57.285 29.630 0.00 0.00 0.00 3.28
625 626 8.981647 TCTCGTACTTTACAAAACTATCCAAAC 58.018 33.333 0.00 0.00 0.00 2.93
626 627 8.891671 TCGTACTTTACAAAACTATCCAAACT 57.108 30.769 0.00 0.00 0.00 2.66
627 628 9.979578 TCGTACTTTACAAAACTATCCAAACTA 57.020 29.630 0.00 0.00 0.00 2.24
636 637 9.423061 ACAAAACTATCCAAACTAAATTGATGC 57.577 29.630 0.00 0.00 31.84 3.91
637 638 9.421806 CAAAACTATCCAAACTAAATTGATGCA 57.578 29.630 0.00 0.00 31.84 3.96
645 646 9.381033 TCCAAACTAAATTGATGCATTAATTGG 57.619 29.630 25.02 21.61 32.38 3.16
646 647 8.614346 CCAAACTAAATTGATGCATTAATTGGG 58.386 33.333 25.02 21.41 31.84 4.12
647 648 9.381033 CAAACTAAATTGATGCATTAATTGGGA 57.619 29.630 25.02 14.81 31.84 4.37
661 662 4.774660 AATTGGGATTAATGGCAATGCA 57.225 36.364 7.79 0.00 0.00 3.96
662 663 4.986054 ATTGGGATTAATGGCAATGCAT 57.014 36.364 7.79 0.00 0.00 3.96
663 664 3.755112 TGGGATTAATGGCAATGCATG 57.245 42.857 7.79 0.00 0.00 4.06
664 665 8.650441 TTAATTGGGATTAATGGCAATGCATGC 61.650 37.037 11.82 11.82 41.71 4.06
677 678 5.494632 CAATGCATGCATTCTTGACTAGA 57.505 39.130 36.90 5.43 43.92 2.43
678 679 6.073327 CAATGCATGCATTCTTGACTAGAT 57.927 37.500 36.90 14.32 43.92 1.98
679 680 7.198306 CAATGCATGCATTCTTGACTAGATA 57.802 36.000 36.90 4.26 43.92 1.98
680 681 7.645402 CAATGCATGCATTCTTGACTAGATAA 58.355 34.615 36.90 3.86 43.92 1.75
681 682 6.856135 TGCATGCATTCTTGACTAGATAAG 57.144 37.500 18.46 0.38 31.54 1.73
682 683 6.351711 TGCATGCATTCTTGACTAGATAAGT 58.648 36.000 18.46 0.00 42.80 2.24
683 684 7.500141 TGCATGCATTCTTGACTAGATAAGTA 58.500 34.615 18.46 0.00 39.07 2.24
684 685 7.986889 TGCATGCATTCTTGACTAGATAAGTAA 59.013 33.333 18.46 0.00 39.07 2.24
685 686 8.997323 GCATGCATTCTTGACTAGATAAGTAAT 58.003 33.333 14.21 0.98 39.07 1.89
688 689 9.698309 TGCATTCTTGACTAGATAAGTAATAGC 57.302 33.333 0.00 8.80 39.07 2.97
689 690 9.698309 GCATTCTTGACTAGATAAGTAATAGCA 57.302 33.333 0.00 0.00 39.07 3.49
693 694 9.503399 TCTTGACTAGATAAGTAATAGCATCGA 57.497 33.333 0.00 0.00 39.07 3.59
696 697 8.184848 TGACTAGATAAGTAATAGCATCGATGC 58.815 37.037 37.29 37.29 46.15 3.91
697 698 8.056407 ACTAGATAAGTAATAGCATCGATGCA 57.944 34.615 42.35 30.71 46.28 3.96
698 699 8.690884 ACTAGATAAGTAATAGCATCGATGCAT 58.309 33.333 42.35 31.34 46.28 3.96
708 709 3.619233 CATCGATGCATGCATTCTTGA 57.381 42.857 32.60 25.52 36.70 3.02
709 710 3.297472 CATCGATGCATGCATTCTTGAC 58.703 45.455 32.60 18.10 36.70 3.18
710 711 2.635714 TCGATGCATGCATTCTTGACT 58.364 42.857 32.60 10.44 36.70 3.41
711 712 3.795877 TCGATGCATGCATTCTTGACTA 58.204 40.909 32.60 9.53 36.70 2.59
712 713 3.805971 TCGATGCATGCATTCTTGACTAG 59.194 43.478 32.60 10.72 36.70 2.57
713 714 3.805971 CGATGCATGCATTCTTGACTAGA 59.194 43.478 32.60 0.81 36.70 2.43
714 715 4.451435 CGATGCATGCATTCTTGACTAGAT 59.549 41.667 32.60 8.02 36.70 1.98
715 716 5.636543 CGATGCATGCATTCTTGACTAGATA 59.363 40.000 32.60 0.00 36.70 1.98
716 717 6.146673 CGATGCATGCATTCTTGACTAGATAA 59.853 38.462 32.60 0.00 36.70 1.75
717 718 6.856135 TGCATGCATTCTTGACTAGATAAG 57.144 37.500 18.46 0.38 31.54 1.73
718 719 6.351711 TGCATGCATTCTTGACTAGATAAGT 58.648 36.000 18.46 0.00 42.80 2.24
719 720 7.500141 TGCATGCATTCTTGACTAGATAAGTA 58.500 34.615 18.46 0.00 39.07 2.24
720 721 7.986889 TGCATGCATTCTTGACTAGATAAGTAA 59.013 33.333 18.46 0.00 39.07 2.24
721 722 8.997323 GCATGCATTCTTGACTAGATAAGTAAT 58.003 33.333 14.21 0.98 39.07 1.89
724 725 9.698309 TGCATTCTTGACTAGATAAGTAATAGC 57.302 33.333 0.00 8.80 39.07 2.97
725 726 9.698309 GCATTCTTGACTAGATAAGTAATAGCA 57.302 33.333 0.00 0.00 39.07 3.49
729 730 8.237949 TCTTGACTAGATAAGTAATAGCATCGC 58.762 37.037 0.00 0.00 39.07 4.58
730 731 7.448748 TGACTAGATAAGTAATAGCATCGCA 57.551 36.000 0.00 0.00 39.07 5.10
731 732 8.056407 TGACTAGATAAGTAATAGCATCGCAT 57.944 34.615 0.00 0.00 39.07 4.73
732 733 7.970614 TGACTAGATAAGTAATAGCATCGCATG 59.029 37.037 0.00 0.00 39.07 4.06
733 734 6.754209 ACTAGATAAGTAATAGCATCGCATGC 59.246 38.462 7.91 7.91 46.58 4.06
742 743 3.544615 CATCGCATGCATTGGTGAG 57.455 52.632 19.57 0.00 0.00 3.51
743 744 0.736636 CATCGCATGCATTGGTGAGT 59.263 50.000 19.57 0.00 0.00 3.41
744 745 1.133598 CATCGCATGCATTGGTGAGTT 59.866 47.619 19.57 0.00 0.00 3.01
745 746 0.804364 TCGCATGCATTGGTGAGTTC 59.196 50.000 19.57 0.00 0.00 3.01
746 747 0.806868 CGCATGCATTGGTGAGTTCT 59.193 50.000 19.57 0.00 0.00 3.01
747 748 1.200716 CGCATGCATTGGTGAGTTCTT 59.799 47.619 19.57 0.00 0.00 2.52
748 749 2.352030 CGCATGCATTGGTGAGTTCTTT 60.352 45.455 19.57 0.00 0.00 2.52
749 750 3.656559 GCATGCATTGGTGAGTTCTTTT 58.343 40.909 14.21 0.00 0.00 2.27
750 751 4.060205 GCATGCATTGGTGAGTTCTTTTT 58.940 39.130 14.21 0.00 0.00 1.94
777 778 6.411630 TTCTTGCATGCAAAGATTTAATGC 57.588 33.333 31.37 13.97 38.70 3.56
778 779 4.563580 TCTTGCATGCAAAGATTTAATGCG 59.436 37.500 31.37 16.32 42.91 4.73
779 780 2.604011 TGCATGCAAAGATTTAATGCGC 59.396 40.909 20.30 0.00 42.91 6.09
780 781 2.033492 GCATGCAAAGATTTAATGCGCC 60.033 45.455 14.21 0.00 42.91 6.53
781 782 3.450578 CATGCAAAGATTTAATGCGCCT 58.549 40.909 4.18 0.00 42.91 5.52
782 783 3.591196 TGCAAAGATTTAATGCGCCTT 57.409 38.095 4.18 3.40 42.91 4.35
783 784 4.710423 TGCAAAGATTTAATGCGCCTTA 57.290 36.364 4.18 2.12 42.91 2.69
784 785 4.671377 TGCAAAGATTTAATGCGCCTTAG 58.329 39.130 4.18 0.00 42.91 2.18
785 786 4.397730 TGCAAAGATTTAATGCGCCTTAGA 59.602 37.500 4.18 0.71 42.91 2.10
786 787 5.105957 TGCAAAGATTTAATGCGCCTTAGAA 60.106 36.000 4.18 3.96 42.91 2.10
787 788 5.979517 GCAAAGATTTAATGCGCCTTAGAAT 59.020 36.000 4.18 8.47 0.00 2.40
788 789 6.142958 GCAAAGATTTAATGCGCCTTAGAATC 59.857 38.462 19.84 19.84 0.00 2.52
789 790 7.420800 CAAAGATTTAATGCGCCTTAGAATCT 58.579 34.615 21.99 21.99 34.77 2.40
790 791 7.573968 AAGATTTAATGCGCCTTAGAATCTT 57.426 32.000 26.49 26.49 37.47 2.40
791 792 8.677148 AAGATTTAATGCGCCTTAGAATCTTA 57.323 30.769 28.28 8.95 39.33 2.10
792 793 8.677148 AGATTTAATGCGCCTTAGAATCTTAA 57.323 30.769 21.99 9.70 30.56 1.85
793 794 9.120538 AGATTTAATGCGCCTTAGAATCTTAAA 57.879 29.630 21.99 10.40 30.56 1.52
794 795 9.730420 GATTTAATGCGCCTTAGAATCTTAAAA 57.270 29.630 19.99 8.67 0.00 1.52
795 796 9.736023 ATTTAATGCGCCTTAGAATCTTAAAAG 57.264 29.630 4.18 0.00 0.00 2.27
796 797 5.757850 ATGCGCCTTAGAATCTTAAAAGG 57.242 39.130 4.18 6.04 41.23 3.11
797 798 4.839121 TGCGCCTTAGAATCTTAAAAGGA 58.161 39.130 13.06 0.00 40.85 3.36
798 799 4.876107 TGCGCCTTAGAATCTTAAAAGGAG 59.124 41.667 13.06 10.93 40.85 3.69
799 800 5.116882 GCGCCTTAGAATCTTAAAAGGAGA 58.883 41.667 15.24 0.00 40.21 3.71
800 801 5.760743 GCGCCTTAGAATCTTAAAAGGAGAT 59.239 40.000 15.24 0.00 40.21 2.75
801 802 6.293135 GCGCCTTAGAATCTTAAAAGGAGATG 60.293 42.308 15.24 4.12 40.21 2.90
802 803 6.203723 CGCCTTAGAATCTTAAAAGGAGATGG 59.796 42.308 13.06 0.00 40.21 3.51
803 804 7.283329 GCCTTAGAATCTTAAAAGGAGATGGA 58.717 38.462 13.06 0.00 40.85 3.41
804 805 7.443879 GCCTTAGAATCTTAAAAGGAGATGGAG 59.556 40.741 13.06 0.00 40.85 3.86
805 806 8.709308 CCTTAGAATCTTAAAAGGAGATGGAGA 58.291 37.037 4.65 0.00 40.85 3.71
808 809 8.329346 AGAATCTTAAAAGGAGATGGAGATGA 57.671 34.615 0.00 0.00 34.24 2.92
809 810 8.431222 AGAATCTTAAAAGGAGATGGAGATGAG 58.569 37.037 0.00 0.00 34.24 2.90
810 811 5.923204 TCTTAAAAGGAGATGGAGATGAGC 58.077 41.667 0.00 0.00 0.00 4.26
811 812 3.574354 AAAAGGAGATGGAGATGAGCC 57.426 47.619 0.00 0.00 0.00 4.70
812 813 1.433121 AAGGAGATGGAGATGAGCCC 58.567 55.000 0.00 0.00 0.00 5.19
813 814 0.567182 AGGAGATGGAGATGAGCCCT 59.433 55.000 0.00 0.00 0.00 5.19
814 815 1.061502 AGGAGATGGAGATGAGCCCTT 60.062 52.381 0.00 0.00 0.00 3.95
815 816 1.773653 GGAGATGGAGATGAGCCCTTT 59.226 52.381 0.00 0.00 0.00 3.11
816 817 2.975489 GGAGATGGAGATGAGCCCTTTA 59.025 50.000 0.00 0.00 0.00 1.85
817 818 3.392616 GGAGATGGAGATGAGCCCTTTAA 59.607 47.826 0.00 0.00 0.00 1.52
818 819 4.141390 GGAGATGGAGATGAGCCCTTTAAA 60.141 45.833 0.00 0.00 0.00 1.52
819 820 5.457342 GGAGATGGAGATGAGCCCTTTAAAT 60.457 44.000 0.00 0.00 0.00 1.40
820 821 5.629125 AGATGGAGATGAGCCCTTTAAATC 58.371 41.667 0.00 0.00 0.00 2.17
821 822 3.808728 TGGAGATGAGCCCTTTAAATCG 58.191 45.455 0.00 0.00 0.00 3.34
822 823 3.142174 GGAGATGAGCCCTTTAAATCGG 58.858 50.000 0.00 0.00 0.00 4.18
823 824 3.181454 GGAGATGAGCCCTTTAAATCGGA 60.181 47.826 5.80 0.00 0.00 4.55
824 825 4.451900 GAGATGAGCCCTTTAAATCGGAA 58.548 43.478 5.80 0.00 0.00 4.30
825 826 4.855340 AGATGAGCCCTTTAAATCGGAAA 58.145 39.130 5.80 0.00 0.00 3.13
826 827 5.261216 AGATGAGCCCTTTAAATCGGAAAA 58.739 37.500 5.80 0.00 0.00 2.29
827 828 5.714806 AGATGAGCCCTTTAAATCGGAAAAA 59.285 36.000 5.80 0.00 0.00 1.94
828 829 5.993748 TGAGCCCTTTAAATCGGAAAAAT 57.006 34.783 5.80 0.00 0.00 1.82
829 830 5.719173 TGAGCCCTTTAAATCGGAAAAATG 58.281 37.500 5.80 0.00 0.00 2.32
830 831 5.478679 TGAGCCCTTTAAATCGGAAAAATGA 59.521 36.000 5.80 0.00 0.00 2.57
831 832 6.015010 TGAGCCCTTTAAATCGGAAAAATGAA 60.015 34.615 5.80 0.00 0.00 2.57
832 833 6.764379 AGCCCTTTAAATCGGAAAAATGAAA 58.236 32.000 5.80 0.00 0.00 2.69
833 834 7.220740 AGCCCTTTAAATCGGAAAAATGAAAA 58.779 30.769 5.80 0.00 0.00 2.29
834 835 7.717436 AGCCCTTTAAATCGGAAAAATGAAAAA 59.283 29.630 5.80 0.00 0.00 1.94
862 863 9.555727 TTGAGATAATCCCTATAAACCGAAAAG 57.444 33.333 0.00 0.00 0.00 2.27
864 865 8.271398 AGATAATCCCTATAAACCGAAAAGGA 57.729 34.615 0.00 0.00 45.00 3.36
865 866 8.376270 AGATAATCCCTATAAACCGAAAAGGAG 58.624 37.037 0.00 0.00 45.00 3.69
866 867 4.765813 TCCCTATAAACCGAAAAGGAGG 57.234 45.455 0.00 0.00 45.00 4.30
867 868 3.457012 TCCCTATAAACCGAAAAGGAGGG 59.543 47.826 0.00 0.00 45.84 4.30
868 869 3.457012 CCCTATAAACCGAAAAGGAGGGA 59.543 47.826 0.00 0.00 46.86 4.20
869 870 4.444449 CCCTATAAACCGAAAAGGAGGGAG 60.444 50.000 0.00 0.00 46.86 4.30
870 871 4.163649 CCTATAAACCGAAAAGGAGGGAGT 59.836 45.833 0.00 0.00 45.00 3.85
871 872 5.364735 CCTATAAACCGAAAAGGAGGGAGTA 59.635 44.000 0.00 0.00 45.00 2.59
872 873 5.970501 ATAAACCGAAAAGGAGGGAGTAT 57.029 39.130 0.00 0.00 45.00 2.12
873 874 4.652679 AAACCGAAAAGGAGGGAGTATT 57.347 40.909 0.00 0.00 45.00 1.89
874 875 5.767277 AAACCGAAAAGGAGGGAGTATTA 57.233 39.130 0.00 0.00 45.00 0.98
875 876 5.970501 AACCGAAAAGGAGGGAGTATTAT 57.029 39.130 0.00 0.00 45.00 1.28
876 877 7.441903 AAACCGAAAAGGAGGGAGTATTATA 57.558 36.000 0.00 0.00 45.00 0.98
877 878 6.667558 ACCGAAAAGGAGGGAGTATTATAG 57.332 41.667 0.00 0.00 45.00 1.31
878 879 6.379579 ACCGAAAAGGAGGGAGTATTATAGA 58.620 40.000 0.00 0.00 45.00 1.98
879 880 6.842807 ACCGAAAAGGAGGGAGTATTATAGAA 59.157 38.462 0.00 0.00 45.00 2.10
880 881 7.153315 CCGAAAAGGAGGGAGTATTATAGAAC 58.847 42.308 0.00 0.00 45.00 3.01
881 882 7.201974 CCGAAAAGGAGGGAGTATTATAGAACA 60.202 40.741 0.00 0.00 45.00 3.18
882 883 7.868415 CGAAAAGGAGGGAGTATTATAGAACAG 59.132 40.741 0.00 0.00 0.00 3.16
883 884 8.855804 AAAAGGAGGGAGTATTATAGAACAGA 57.144 34.615 0.00 0.00 0.00 3.41
884 885 8.855804 AAAGGAGGGAGTATTATAGAACAGAA 57.144 34.615 0.00 0.00 0.00 3.02
885 886 8.855804 AAGGAGGGAGTATTATAGAACAGAAA 57.144 34.615 0.00 0.00 0.00 2.52
886 887 8.855804 AGGAGGGAGTATTATAGAACAGAAAA 57.144 34.615 0.00 0.00 0.00 2.29
887 888 9.280456 AGGAGGGAGTATTATAGAACAGAAAAA 57.720 33.333 0.00 0.00 0.00 1.94
970 1384 2.809601 GGGAGTACACTGTGCGCG 60.810 66.667 7.90 0.00 0.00 6.86
971 1385 3.479269 GGAGTACACTGTGCGCGC 61.479 66.667 27.26 27.26 0.00 6.86
987 1401 2.414594 GCATCCGCTGCCCATTTC 59.585 61.111 0.00 0.00 45.66 2.17
1158 1572 2.506217 CAGTACGCGACGGTGCAT 60.506 61.111 15.93 0.00 34.15 3.96
1328 1742 3.252974 ACGGAATCACCTGATTGACTC 57.747 47.619 5.23 0.00 44.14 3.36
1409 1841 4.223032 TCCTATCATCCTTCGATTTAGGGC 59.777 45.833 1.83 0.00 34.88 5.19
1618 2057 0.179078 CTCAGCTGAGACATGGGAGC 60.179 60.000 35.69 0.00 44.74 4.70
1661 2109 1.171308 GAGAGTGTGTTGCCATGCAT 58.829 50.000 0.00 0.00 38.76 3.96
1693 2142 0.461548 TGGCAGGAGAATCTGTAGCG 59.538 55.000 0.00 0.00 37.12 4.26
1717 2166 2.173569 AGGAAATGTAGGATCAGCCACC 59.826 50.000 0.00 0.00 40.02 4.61
1732 2181 2.020694 GCCACCACTCCATGAGAATGG 61.021 57.143 9.31 9.31 43.01 3.16
1842 2291 9.078990 TGACCTGATACAAGATATGTTAGTAGG 57.921 37.037 0.00 0.00 43.63 3.18
1843 2292 9.298250 GACCTGATACAAGATATGTTAGTAGGA 57.702 37.037 0.00 0.00 43.63 2.94
1844 2293 9.303116 ACCTGATACAAGATATGTTAGTAGGAG 57.697 37.037 0.00 3.83 43.63 3.69
1845 2294 9.303116 CCTGATACAAGATATGTTAGTAGGAGT 57.697 37.037 0.00 0.00 43.63 3.85
1871 2320 5.023533 TCTATAATCTGACTTTGCCGCTT 57.976 39.130 0.00 0.00 0.00 4.68
1912 2397 4.559862 AACAGACCAGACTCCCAAATAG 57.440 45.455 0.00 0.00 0.00 1.73
1957 2442 9.877178 GATAGGTCATAGGTCCAAATAAGTATG 57.123 37.037 0.00 0.00 0.00 2.39
2013 2498 4.216042 TCTGCATCAACACGAACAATTCAT 59.784 37.500 0.00 0.00 0.00 2.57
2041 2526 2.961741 TGCACTGCCCTGTTTCATTTAA 59.038 40.909 0.00 0.00 0.00 1.52
2216 2701 3.636764 CCACCTAGGTCTTGCAAAAGTTT 59.363 43.478 12.84 0.00 0.00 2.66
2225 2710 6.096846 AGGTCTTGCAAAAGTTTAACTGATGT 59.903 34.615 0.00 0.00 0.00 3.06
2226 2711 7.284489 AGGTCTTGCAAAAGTTTAACTGATGTA 59.716 33.333 0.00 0.00 0.00 2.29
2263 2748 9.716507 TTTGCTAGCTCGTGAAATATAAAATTC 57.283 29.630 17.23 0.00 0.00 2.17
2286 2771 5.104374 CCATTGCATGAGGTAATTGTTCAC 58.896 41.667 0.00 0.00 28.44 3.18
2305 2790 0.447801 CCAGCGGCATGTGAACTTAC 59.552 55.000 1.45 0.00 0.00 2.34
2385 2873 2.806945 TTCCAGCCTTCCAGGTAATG 57.193 50.000 0.00 0.00 37.80 1.90
2404 2892 7.083875 GTAATGTACCATGTGCACATTTAGT 57.916 36.000 29.48 25.67 41.71 2.24
2405 2893 6.588719 AATGTACCATGTGCACATTTAGTT 57.411 33.333 29.48 15.83 39.27 2.24
2406 2894 7.695480 AATGTACCATGTGCACATTTAGTTA 57.305 32.000 29.48 17.65 39.27 2.24
2407 2895 6.489127 TGTACCATGTGCACATTTAGTTAC 57.511 37.500 29.48 22.13 33.61 2.50
2408 2896 5.998363 TGTACCATGTGCACATTTAGTTACA 59.002 36.000 29.48 24.01 33.61 2.41
2409 2897 6.657117 TGTACCATGTGCACATTTAGTTACAT 59.343 34.615 29.48 2.68 36.44 2.29
2410 2898 5.953183 ACCATGTGCACATTTAGTTACATG 58.047 37.500 29.48 15.35 44.68 3.21
2411 2899 5.709631 ACCATGTGCACATTTAGTTACATGA 59.290 36.000 29.48 0.00 46.24 3.07
2412 2900 6.208402 ACCATGTGCACATTTAGTTACATGAA 59.792 34.615 29.48 0.00 46.24 2.57
2413 2901 7.093814 ACCATGTGCACATTTAGTTACATGAAT 60.094 33.333 29.48 0.64 46.24 2.57
2414 2902 7.760794 CCATGTGCACATTTAGTTACATGAATT 59.239 33.333 29.48 0.21 46.24 2.17
2415 2903 9.786105 CATGTGCACATTTAGTTACATGAATTA 57.214 29.630 29.48 0.00 46.24 1.40
2417 2905 9.838975 TGTGCACATTTAGTTACATGAATTAAG 57.161 29.630 17.42 0.00 0.00 1.85
2418 2906 9.840427 GTGCACATTTAGTTACATGAATTAAGT 57.160 29.630 13.17 0.00 0.00 2.24
2445 2933 9.754382 ATATTGATGTTTGTCCATATTTTGCTC 57.246 29.630 0.00 0.00 0.00 4.26
2446 2934 6.839124 TGATGTTTGTCCATATTTTGCTCT 57.161 33.333 0.00 0.00 0.00 4.09
2447 2935 6.855836 TGATGTTTGTCCATATTTTGCTCTC 58.144 36.000 0.00 0.00 0.00 3.20
2448 2936 5.643379 TGTTTGTCCATATTTTGCTCTCC 57.357 39.130 0.00 0.00 0.00 3.71
2449 2937 5.076182 TGTTTGTCCATATTTTGCTCTCCA 58.924 37.500 0.00 0.00 0.00 3.86
2450 2938 5.716228 TGTTTGTCCATATTTTGCTCTCCAT 59.284 36.000 0.00 0.00 0.00 3.41
2451 2939 6.211184 TGTTTGTCCATATTTTGCTCTCCATT 59.789 34.615 0.00 0.00 0.00 3.16
2452 2940 5.840243 TGTCCATATTTTGCTCTCCATTG 57.160 39.130 0.00 0.00 0.00 2.82
2453 2941 5.263599 TGTCCATATTTTGCTCTCCATTGT 58.736 37.500 0.00 0.00 0.00 2.71
2454 2942 5.125900 TGTCCATATTTTGCTCTCCATTGTG 59.874 40.000 0.00 0.00 0.00 3.33
2455 2943 4.098349 TCCATATTTTGCTCTCCATTGTGC 59.902 41.667 0.00 0.00 0.00 4.57
2456 2944 4.142116 CCATATTTTGCTCTCCATTGTGCA 60.142 41.667 0.00 0.00 35.11 4.57
2457 2945 2.798976 TTTTGCTCTCCATTGTGCAC 57.201 45.000 10.75 10.75 36.39 4.57
2458 2946 1.985473 TTTGCTCTCCATTGTGCACT 58.015 45.000 19.41 0.00 36.39 4.40
2459 2947 1.985473 TTGCTCTCCATTGTGCACTT 58.015 45.000 19.41 2.38 36.39 3.16
2512 3002 4.382577 CGCCCCAACTTTTATTAAAGCCAT 60.383 41.667 4.15 0.00 43.72 4.40
2722 3224 1.586422 CACCCGCTTCAGTCCATATG 58.414 55.000 0.00 0.00 0.00 1.78
2736 3240 7.355101 TCAGTCCATATGTCCTTAGTTACTCT 58.645 38.462 1.24 0.00 0.00 3.24
2858 3364 2.040464 ATCGCCCCCACCAGATCT 60.040 61.111 0.00 0.00 0.00 2.75
2963 3476 3.258971 AGCAGTATTGAGAGCTTCACC 57.741 47.619 0.00 0.00 34.94 4.02
3053 3568 5.573380 TCAGCAATAATAGCCCAGATCTT 57.427 39.130 0.00 0.00 0.00 2.40
3138 3655 5.998553 CATGTCATATCTTCAACATGCCTC 58.001 41.667 0.00 0.00 41.59 4.70
3141 3658 1.953559 TATCTTCAACATGCCTCCGC 58.046 50.000 0.00 0.00 0.00 5.54
3177 3694 6.214191 TCTCTAGTCAGGCTCTTGTTATTG 57.786 41.667 0.00 0.00 0.00 1.90
3204 3721 4.885413 TCAGCCAAAGGAAAACATGAATG 58.115 39.130 0.00 0.00 0.00 2.67
3225 3742 2.380064 TGGAAACAGGAAACATGCCT 57.620 45.000 0.00 0.00 35.75 4.75
3226 3743 2.238521 TGGAAACAGGAAACATGCCTC 58.761 47.619 0.00 0.00 32.12 4.70
3227 3744 1.546029 GGAAACAGGAAACATGCCTCC 59.454 52.381 5.67 5.67 32.12 4.30
3228 3745 2.238521 GAAACAGGAAACATGCCTCCA 58.761 47.619 14.44 0.00 33.83 3.86
3229 3746 2.610438 AACAGGAAACATGCCTCCAT 57.390 45.000 14.44 1.66 33.83 3.41
3256 3773 8.522003 TGTGCACATTTAGTTACATGAATCAAT 58.478 29.630 17.42 0.00 0.00 2.57
3333 3982 6.440647 TCCTGTCTGATGAATTTACCTACTGT 59.559 38.462 0.00 0.00 0.00 3.55
3341 3990 7.888021 TGATGAATTTACCTACTGTGTCCAAAT 59.112 33.333 0.00 0.00 0.00 2.32
3428 4077 2.703798 CCTGATGGGCGCAAACCTG 61.704 63.158 10.83 4.52 0.00 4.00
3446 4095 2.465813 CTGAACTCCTCCAGGATCAGT 58.534 52.381 14.53 2.41 42.34 3.41
3530 4179 1.188863 TTGTCCGGCTCTACTTACCC 58.811 55.000 0.00 0.00 0.00 3.69
3566 4215 2.780693 CCTCCTGTCCCTCTCCCA 59.219 66.667 0.00 0.00 0.00 4.37
3569 4218 0.041833 CTCCTGTCCCTCTCCCAGAA 59.958 60.000 0.00 0.00 0.00 3.02
3650 4299 2.127270 GCACGCGACCACAATGTG 60.127 61.111 15.93 6.37 0.00 3.21
3740 4389 1.279271 AGCAAGAACGCCTACTCCATT 59.721 47.619 0.00 0.00 0.00 3.16
3768 4417 2.905996 AACAGCCCCTTCCGCATCA 61.906 57.895 0.00 0.00 0.00 3.07
3843 4493 6.095440 TGTGGAGGCTTATTAAAAATGCTCTC 59.905 38.462 0.00 0.00 0.00 3.20
3940 4599 4.336433 CCTTTGGTTATCTGTATGCCTGTG 59.664 45.833 0.00 0.00 0.00 3.66
3993 4653 0.110056 CCATGTTGCGTGCTCAACTC 60.110 55.000 14.65 0.00 44.83 3.01
4015 4675 2.417933 AGAATGATCAACGCAACTCAGC 59.582 45.455 0.00 0.00 0.00 4.26
4018 4678 2.337583 TGATCAACGCAACTCAGCTAC 58.662 47.619 0.00 0.00 0.00 3.58
4036 4696 1.148310 ACTGTCGACCGAATGCAAAG 58.852 50.000 14.12 2.52 0.00 2.77
4039 4699 2.734606 CTGTCGACCGAATGCAAAGTAA 59.265 45.455 14.12 0.00 0.00 2.24
4040 4700 2.477375 TGTCGACCGAATGCAAAGTAAC 59.523 45.455 14.12 0.00 0.00 2.50
4041 4701 2.735134 GTCGACCGAATGCAAAGTAACT 59.265 45.455 3.51 0.00 0.00 2.24
4042 4702 3.922240 GTCGACCGAATGCAAAGTAACTA 59.078 43.478 3.51 0.00 0.00 2.24
4043 4703 3.922240 TCGACCGAATGCAAAGTAACTAC 59.078 43.478 0.00 0.00 0.00 2.73
4051 4711 8.400947 CCGAATGCAAAGTAACTACTAGTACTA 58.599 37.037 1.89 1.89 34.99 1.82
4084 4744 2.089980 GCCACTGCATTGTTCAGAGAT 58.910 47.619 3.14 0.00 37.47 2.75
4128 4788 2.472029 ACCTTTGAGTGGAGGATCGAT 58.528 47.619 0.00 0.00 36.84 3.59
4129 4789 2.840651 ACCTTTGAGTGGAGGATCGATT 59.159 45.455 0.00 0.00 36.84 3.34
4130 4790 3.118592 ACCTTTGAGTGGAGGATCGATTC 60.119 47.826 0.00 0.00 36.84 2.52
4131 4791 3.133721 CCTTTGAGTGGAGGATCGATTCT 59.866 47.826 5.71 5.71 34.91 2.40
4132 4792 4.367450 CTTTGAGTGGAGGATCGATTCTC 58.633 47.826 23.48 23.48 31.05 2.87
4133 4793 3.018423 TGAGTGGAGGATCGATTCTCA 57.982 47.619 30.35 16.45 31.05 3.27
4134 4794 3.365472 TGAGTGGAGGATCGATTCTCAA 58.635 45.455 30.35 20.33 31.05 3.02
4135 4795 3.382865 TGAGTGGAGGATCGATTCTCAAG 59.617 47.826 30.35 0.00 31.05 3.02
4136 4796 3.634448 GAGTGGAGGATCGATTCTCAAGA 59.366 47.826 30.35 14.08 34.37 3.02
4137 4797 4.222336 AGTGGAGGATCGATTCTCAAGAT 58.778 43.478 30.35 12.10 34.37 2.40
4138 4798 4.653341 AGTGGAGGATCGATTCTCAAGATT 59.347 41.667 30.35 11.30 34.37 2.40
4139 4799 4.987912 GTGGAGGATCGATTCTCAAGATTC 59.012 45.833 30.35 15.24 34.37 2.52
4140 4800 4.233789 GGAGGATCGATTCTCAAGATTCG 58.766 47.826 30.35 14.86 44.51 3.34
4141 4801 4.233789 GAGGATCGATTCTCAAGATTCGG 58.766 47.826 25.98 6.16 43.79 4.30
4142 4802 3.006323 AGGATCGATTCTCAAGATTCGGG 59.994 47.826 18.75 0.00 43.79 5.14
4143 4803 3.005897 GGATCGATTCTCAAGATTCGGGA 59.994 47.826 18.75 6.40 43.79 5.14
4144 4804 4.322349 GGATCGATTCTCAAGATTCGGGAT 60.322 45.833 18.75 9.85 43.79 3.85
4145 4805 3.982475 TCGATTCTCAAGATTCGGGATG 58.018 45.455 18.75 0.00 43.79 3.51
4146 4806 3.636764 TCGATTCTCAAGATTCGGGATGA 59.363 43.478 18.75 2.88 43.79 2.92
4147 4807 4.099419 TCGATTCTCAAGATTCGGGATGAA 59.901 41.667 18.75 2.33 43.79 2.57
4153 4813 4.800554 ATTCGGGATGAATCCGCC 57.199 55.556 3.27 0.00 44.01 6.13
4154 4814 1.301716 ATTCGGGATGAATCCGCCG 60.302 57.895 3.27 2.90 44.01 6.46
4155 4815 1.754380 ATTCGGGATGAATCCGCCGA 61.754 55.000 6.60 6.60 44.01 5.54
4156 4816 3.250296 ATTCGGGATGAATCCGCCGAA 62.250 52.381 19.13 19.13 44.01 4.30
4157 4817 4.701850 ATTCGGGATGAATCCGCCGAAA 62.702 50.000 20.11 9.62 46.17 3.46
4159 4819 3.379650 GGATGAATCCGCCGAAAGA 57.620 52.632 0.00 0.00 37.19 2.52
4160 4820 1.663695 GGATGAATCCGCCGAAAGAA 58.336 50.000 0.00 0.00 37.19 2.52
4161 4821 1.330829 GGATGAATCCGCCGAAAGAAC 59.669 52.381 0.00 0.00 37.19 3.01
4162 4822 2.280628 GATGAATCCGCCGAAAGAACT 58.719 47.619 0.00 0.00 0.00 3.01
4163 4823 1.438651 TGAATCCGCCGAAAGAACTG 58.561 50.000 0.00 0.00 0.00 3.16
4164 4824 0.727398 GAATCCGCCGAAAGAACTGG 59.273 55.000 0.00 0.00 0.00 4.00
4165 4825 0.676782 AATCCGCCGAAAGAACTGGG 60.677 55.000 0.00 0.00 0.00 4.45
4166 4826 1.838073 ATCCGCCGAAAGAACTGGGT 61.838 55.000 0.00 0.00 0.00 4.51
4167 4827 2.033194 CCGCCGAAAGAACTGGGTC 61.033 63.158 0.00 0.00 0.00 4.46
4168 4828 1.301401 CGCCGAAAGAACTGGGTCA 60.301 57.895 0.00 0.00 0.00 4.02
4169 4829 0.673644 CGCCGAAAGAACTGGGTCAT 60.674 55.000 0.00 0.00 0.00 3.06
4170 4830 1.404986 CGCCGAAAGAACTGGGTCATA 60.405 52.381 0.00 0.00 0.00 2.15
4171 4831 2.706890 GCCGAAAGAACTGGGTCATAA 58.293 47.619 0.00 0.00 0.00 1.90
4172 4832 2.678336 GCCGAAAGAACTGGGTCATAAG 59.322 50.000 0.00 0.00 0.00 1.73
4173 4833 3.618997 GCCGAAAGAACTGGGTCATAAGA 60.619 47.826 0.00 0.00 0.00 2.10
4174 4834 4.770795 CCGAAAGAACTGGGTCATAAGAT 58.229 43.478 0.00 0.00 0.00 2.40
4175 4835 4.572389 CCGAAAGAACTGGGTCATAAGATG 59.428 45.833 0.00 0.00 0.00 2.90
4184 4844 8.472007 AACTGGGTCATAAGATGTTTTTGTAA 57.528 30.769 0.00 0.00 0.00 2.41
4212 4872 9.562408 CTAGTACATCAGTCCTAATCAACTCTA 57.438 37.037 0.00 0.00 0.00 2.43
4233 4893 2.758736 AGTCAGACAAGGATCAGTGC 57.241 50.000 2.66 0.00 0.00 4.40
4234 4894 1.277557 AGTCAGACAAGGATCAGTGCC 59.722 52.381 2.66 0.00 0.00 5.01
4235 4895 1.277557 GTCAGACAAGGATCAGTGCCT 59.722 52.381 0.00 0.00 37.35 4.75
4236 4896 1.277273 TCAGACAAGGATCAGTGCCTG 59.723 52.381 5.22 5.22 35.50 4.85
4237 4897 1.002888 CAGACAAGGATCAGTGCCTGT 59.997 52.381 0.00 0.00 35.50 4.00
4238 4898 1.002888 AGACAAGGATCAGTGCCTGTG 59.997 52.381 0.00 0.00 35.50 3.66
4297 4957 0.247262 CAATTCATCCGCACGTGTCG 60.247 55.000 18.38 19.64 0.00 4.35
4302 4962 2.025418 ATCCGCACGTGTCGGTTTC 61.025 57.895 34.13 12.60 46.49 2.78
4303 4963 2.702751 ATCCGCACGTGTCGGTTTCA 62.703 55.000 34.13 23.16 46.49 2.69
4329 4989 1.597027 CGGACACAAAAGTCGGCCT 60.597 57.895 0.00 0.00 39.42 5.19
4455 5128 0.684805 CGCCTACTCCTTCCTCTGGT 60.685 60.000 0.00 0.00 0.00 4.00
4517 5196 1.078497 CAACTAGCACATCCGGCCA 60.078 57.895 2.24 0.00 0.00 5.36
4725 5728 1.286260 GACCTTGCTCGTCTGACGT 59.714 57.895 27.16 8.43 43.14 4.34
4808 5811 2.093394 TCACCGACCAACTTCTTCAACA 60.093 45.455 0.00 0.00 0.00 3.33
4810 5813 3.315191 CACCGACCAACTTCTTCAACAAT 59.685 43.478 0.00 0.00 0.00 2.71
4825 5828 0.754472 ACAATGCCTGCAAGCTGTTT 59.246 45.000 9.08 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.499139 AGGACGTACATAAATTTGCATGG 57.501 39.130 0.00 0.00 0.00 3.66
2 3 7.810766 AAAAGGACGTACATAAATTTGCATG 57.189 32.000 0.00 0.00 0.00 4.06
24 25 7.166970 CACGCGTATCATCTAGCTAACTAAAAA 59.833 37.037 13.44 0.00 0.00 1.94
25 26 6.635641 CACGCGTATCATCTAGCTAACTAAAA 59.364 38.462 13.44 0.00 0.00 1.52
26 27 6.140786 CACGCGTATCATCTAGCTAACTAAA 58.859 40.000 13.44 0.00 0.00 1.85
27 28 5.237996 ACACGCGTATCATCTAGCTAACTAA 59.762 40.000 13.44 0.00 0.00 2.24
28 29 4.753610 ACACGCGTATCATCTAGCTAACTA 59.246 41.667 13.44 0.00 0.00 2.24
29 30 3.564644 ACACGCGTATCATCTAGCTAACT 59.435 43.478 13.44 0.00 0.00 2.24
30 31 3.886549 ACACGCGTATCATCTAGCTAAC 58.113 45.455 13.44 0.00 0.00 2.34
31 32 4.287720 CAACACGCGTATCATCTAGCTAA 58.712 43.478 13.44 0.00 0.00 3.09
32 33 3.852205 GCAACACGCGTATCATCTAGCTA 60.852 47.826 13.44 0.00 0.00 3.32
33 34 2.732366 CAACACGCGTATCATCTAGCT 58.268 47.619 13.44 0.00 0.00 3.32
34 35 1.190323 GCAACACGCGTATCATCTAGC 59.810 52.381 13.44 4.08 0.00 3.42
35 36 1.787155 GGCAACACGCGTATCATCTAG 59.213 52.381 13.44 0.00 43.84 2.43
36 37 1.847818 GGCAACACGCGTATCATCTA 58.152 50.000 13.44 0.00 43.84 1.98
37 38 1.145759 CGGCAACACGCGTATCATCT 61.146 55.000 13.44 0.00 43.84 2.90
38 39 1.272715 CGGCAACACGCGTATCATC 59.727 57.895 13.44 0.77 43.84 2.92
39 40 3.394588 CGGCAACACGCGTATCAT 58.605 55.556 13.44 0.00 43.84 2.45
47 48 2.162921 CTGACTTCTGCGGCAACACG 62.163 60.000 3.44 0.00 0.00 4.49
48 49 1.160329 ACTGACTTCTGCGGCAACAC 61.160 55.000 3.44 0.00 0.00 3.32
49 50 0.463654 AACTGACTTCTGCGGCAACA 60.464 50.000 3.44 0.00 0.00 3.33
50 51 0.040958 CAACTGACTTCTGCGGCAAC 60.041 55.000 3.44 0.00 0.00 4.17
51 52 1.785041 GCAACTGACTTCTGCGGCAA 61.785 55.000 3.44 0.00 0.00 4.52
52 53 2.253758 GCAACTGACTTCTGCGGCA 61.254 57.895 1.29 1.29 0.00 5.69
53 54 1.580845 ATGCAACTGACTTCTGCGGC 61.581 55.000 0.00 0.00 38.97 6.53
54 55 0.877071 AATGCAACTGACTTCTGCGG 59.123 50.000 0.00 0.00 38.97 5.69
55 56 1.265095 ACAATGCAACTGACTTCTGCG 59.735 47.619 6.19 0.00 38.97 5.18
56 57 4.691860 ATACAATGCAACTGACTTCTGC 57.308 40.909 6.19 0.00 36.60 4.26
57 58 6.072838 AGTGAATACAATGCAACTGACTTCTG 60.073 38.462 6.19 0.00 0.00 3.02
58 59 6.000219 AGTGAATACAATGCAACTGACTTCT 59.000 36.000 6.19 0.00 0.00 2.85
59 60 6.073058 TCAGTGAATACAATGCAACTGACTTC 60.073 38.462 9.05 9.28 41.12 3.01
60 61 5.764686 TCAGTGAATACAATGCAACTGACTT 59.235 36.000 9.05 1.53 41.12 3.01
61 62 5.308014 TCAGTGAATACAATGCAACTGACT 58.692 37.500 9.05 0.00 41.12 3.41
62 63 5.611796 TCAGTGAATACAATGCAACTGAC 57.388 39.130 9.05 0.00 41.12 3.51
63 64 6.631971 TTTCAGTGAATACAATGCAACTGA 57.368 33.333 6.36 9.05 41.12 3.41
64 65 9.577110 AATATTTCAGTGAATACAATGCAACTG 57.423 29.630 6.36 4.83 41.12 3.16
202 203 1.607178 CACCACCACATGCCACCAT 60.607 57.895 0.00 0.00 0.00 3.55
203 204 2.203466 CACCACCACATGCCACCA 60.203 61.111 0.00 0.00 0.00 4.17
204 205 2.990967 CCACCACCACATGCCACC 60.991 66.667 0.00 0.00 0.00 4.61
205 206 1.805428 GAACCACCACCACATGCCAC 61.805 60.000 0.00 0.00 0.00 5.01
206 207 1.530419 GAACCACCACCACATGCCA 60.530 57.895 0.00 0.00 0.00 4.92
207 208 1.228552 AGAACCACCACCACATGCC 60.229 57.895 0.00 0.00 0.00 4.40
208 209 0.537143 TGAGAACCACCACCACATGC 60.537 55.000 0.00 0.00 0.00 4.06
209 210 1.979855 TTGAGAACCACCACCACATG 58.020 50.000 0.00 0.00 0.00 3.21
210 211 2.978156 ATTGAGAACCACCACCACAT 57.022 45.000 0.00 0.00 0.00 3.21
211 212 4.380843 AATATTGAGAACCACCACCACA 57.619 40.909 0.00 0.00 0.00 4.17
212 213 5.497474 ACTAATATTGAGAACCACCACCAC 58.503 41.667 0.00 0.00 0.00 4.16
213 214 5.772393 ACTAATATTGAGAACCACCACCA 57.228 39.130 0.00 0.00 0.00 4.17
214 215 7.608761 TGTTAACTAATATTGAGAACCACCACC 59.391 37.037 7.22 0.00 0.00 4.61
215 216 8.448615 GTGTTAACTAATATTGAGAACCACCAC 58.551 37.037 7.22 0.00 0.00 4.16
216 217 8.380099 AGTGTTAACTAATATTGAGAACCACCA 58.620 33.333 7.22 0.00 33.79 4.17
217 218 8.788325 AGTGTTAACTAATATTGAGAACCACC 57.212 34.615 7.22 0.00 33.79 4.61
218 219 8.880750 GGAGTGTTAACTAATATTGAGAACCAC 58.119 37.037 7.22 0.00 36.52 4.16
219 220 8.044908 GGGAGTGTTAACTAATATTGAGAACCA 58.955 37.037 7.22 0.00 36.52 3.67
220 221 8.265764 AGGGAGTGTTAACTAATATTGAGAACC 58.734 37.037 7.22 0.00 36.52 3.62
221 222 9.315525 GAGGGAGTGTTAACTAATATTGAGAAC 57.684 37.037 7.22 0.00 36.52 3.01
222 223 9.268282 AGAGGGAGTGTTAACTAATATTGAGAA 57.732 33.333 7.22 0.00 36.52 2.87
223 224 8.696374 CAGAGGGAGTGTTAACTAATATTGAGA 58.304 37.037 7.22 0.00 36.52 3.27
224 225 8.478877 ACAGAGGGAGTGTTAACTAATATTGAG 58.521 37.037 7.22 0.00 36.52 3.02
225 226 8.375493 ACAGAGGGAGTGTTAACTAATATTGA 57.625 34.615 7.22 0.00 36.52 2.57
226 227 9.449719 AAACAGAGGGAGTGTTAACTAATATTG 57.550 33.333 7.22 0.00 37.13 1.90
227 228 9.668497 GAAACAGAGGGAGTGTTAACTAATATT 57.332 33.333 7.22 0.00 37.13 1.28
228 229 9.047947 AGAAACAGAGGGAGTGTTAACTAATAT 57.952 33.333 7.22 0.00 37.13 1.28
229 230 8.431910 AGAAACAGAGGGAGTGTTAACTAATA 57.568 34.615 7.22 0.00 37.13 0.98
230 231 7.317722 AGAAACAGAGGGAGTGTTAACTAAT 57.682 36.000 7.22 0.00 37.13 1.73
231 232 6.742559 AGAAACAGAGGGAGTGTTAACTAA 57.257 37.500 7.22 0.00 37.13 2.24
232 233 7.844493 TTAGAAACAGAGGGAGTGTTAACTA 57.156 36.000 7.22 0.00 37.13 2.24
233 234 6.742559 TTAGAAACAGAGGGAGTGTTAACT 57.257 37.500 7.22 0.00 37.13 2.24
234 235 7.981102 ATTTAGAAACAGAGGGAGTGTTAAC 57.019 36.000 0.00 0.00 37.13 2.01
237 238 9.014297 CAAATATTTAGAAACAGAGGGAGTGTT 57.986 33.333 0.00 0.00 39.89 3.32
238 239 8.164070 ACAAATATTTAGAAACAGAGGGAGTGT 58.836 33.333 0.00 0.00 0.00 3.55
239 240 8.567285 ACAAATATTTAGAAACAGAGGGAGTG 57.433 34.615 0.00 0.00 0.00 3.51
240 241 7.549488 CGACAAATATTTAGAAACAGAGGGAGT 59.451 37.037 0.00 0.00 0.00 3.85
241 242 7.549488 ACGACAAATATTTAGAAACAGAGGGAG 59.451 37.037 0.00 0.00 0.00 4.30
242 243 7.391620 ACGACAAATATTTAGAAACAGAGGGA 58.608 34.615 0.00 0.00 0.00 4.20
243 244 7.611213 ACGACAAATATTTAGAAACAGAGGG 57.389 36.000 0.00 0.00 0.00 4.30
244 245 9.893305 AAAACGACAAATATTTAGAAACAGAGG 57.107 29.630 0.00 0.00 0.00 3.69
261 262 9.710979 CACTTGTTAAAATCTCTAAAACGACAA 57.289 29.630 0.00 0.00 0.00 3.18
262 263 9.100554 TCACTTGTTAAAATCTCTAAAACGACA 57.899 29.630 0.00 0.00 0.00 4.35
263 264 9.366513 GTCACTTGTTAAAATCTCTAAAACGAC 57.633 33.333 0.00 0.00 0.00 4.34
264 265 9.321562 AGTCACTTGTTAAAATCTCTAAAACGA 57.678 29.630 0.00 0.00 0.00 3.85
317 318 9.261180 CGGATGTGTAGACATATTTTAGAATGT 57.739 33.333 5.33 0.00 43.22 2.71
318 319 9.261180 ACGGATGTGTAGACATATTTTAGAATG 57.739 33.333 5.33 0.00 43.22 2.67
321 322 9.908152 CATACGGATGTGTAGACATATTTTAGA 57.092 33.333 5.33 0.00 43.22 2.10
322 323 9.692749 ACATACGGATGTGTAGACATATTTTAG 57.307 33.333 13.83 0.00 44.90 1.85
334 335 7.812690 ATGAACTACTACATACGGATGTGTA 57.187 36.000 23.85 19.57 46.11 2.90
335 336 6.710597 ATGAACTACTACATACGGATGTGT 57.289 37.500 23.85 19.50 46.11 3.72
336 337 7.704899 TCAAATGAACTACTACATACGGATGTG 59.295 37.037 23.85 14.95 46.11 3.21
338 339 8.642908 TTCAAATGAACTACTACATACGGATG 57.357 34.615 5.94 5.94 39.16 3.51
339 340 9.832445 ATTTCAAATGAACTACTACATACGGAT 57.168 29.630 0.00 0.00 33.13 4.18
340 341 9.309516 GATTTCAAATGAACTACTACATACGGA 57.690 33.333 0.00 0.00 33.13 4.69
341 342 9.314321 AGATTTCAAATGAACTACTACATACGG 57.686 33.333 0.00 0.00 33.13 4.02
396 397 9.962783 ACGTGTCTCAATATTAGTTAATACTCC 57.037 33.333 0.00 0.00 35.78 3.85
405 406 9.745880 CAAGGTTATACGTGTCTCAATATTAGT 57.254 33.333 0.00 0.00 0.00 2.24
406 407 8.700644 GCAAGGTTATACGTGTCTCAATATTAG 58.299 37.037 0.00 0.00 0.00 1.73
407 408 8.198778 TGCAAGGTTATACGTGTCTCAATATTA 58.801 33.333 0.00 0.00 0.00 0.98
408 409 7.045416 TGCAAGGTTATACGTGTCTCAATATT 58.955 34.615 0.00 0.00 0.00 1.28
409 410 6.578944 TGCAAGGTTATACGTGTCTCAATAT 58.421 36.000 0.00 0.00 0.00 1.28
410 411 5.968254 TGCAAGGTTATACGTGTCTCAATA 58.032 37.500 0.00 0.00 0.00 1.90
411 412 4.827692 TGCAAGGTTATACGTGTCTCAAT 58.172 39.130 0.00 0.00 0.00 2.57
412 413 4.260139 TGCAAGGTTATACGTGTCTCAA 57.740 40.909 0.00 0.00 0.00 3.02
413 414 3.945981 TGCAAGGTTATACGTGTCTCA 57.054 42.857 0.00 0.00 0.00 3.27
414 415 5.600908 TTTTGCAAGGTTATACGTGTCTC 57.399 39.130 0.00 0.00 0.00 3.36
473 474 9.106977 GGAAAGAGATTATATACTCCCTCCTTT 57.893 37.037 0.00 0.00 34.42 3.11
474 475 7.680739 GGGAAAGAGATTATATACTCCCTCCTT 59.319 40.741 15.82 0.00 38.61 3.36
475 476 7.193338 GGGAAAGAGATTATATACTCCCTCCT 58.807 42.308 15.82 0.00 38.61 3.69
476 477 6.960542 TGGGAAAGAGATTATATACTCCCTCC 59.039 42.308 5.47 0.00 41.64 4.30
477 478 8.437274 TTGGGAAAGAGATTATATACTCCCTC 57.563 38.462 5.47 0.00 41.64 4.30
478 479 8.814448 TTTGGGAAAGAGATTATATACTCCCT 57.186 34.615 5.47 0.00 41.64 4.20
479 480 9.862149 TTTTTGGGAAAGAGATTATATACTCCC 57.138 33.333 0.00 0.00 41.49 4.30
504 505 8.574309 AGGGAGTATATCATCTTCTCCTTTTT 57.426 34.615 8.97 0.00 42.76 1.94
505 506 8.016054 AGAGGGAGTATATCATCTTCTCCTTTT 58.984 37.037 8.97 0.00 42.76 2.27
506 507 7.543755 AGAGGGAGTATATCATCTTCTCCTTT 58.456 38.462 8.97 0.00 42.76 3.11
507 508 7.114849 AGAGGGAGTATATCATCTTCTCCTT 57.885 40.000 8.97 2.17 42.76 3.36
508 509 6.734918 AGAGGGAGTATATCATCTTCTCCT 57.265 41.667 8.97 0.00 42.76 3.69
509 510 7.790782 AAAGAGGGAGTATATCATCTTCTCC 57.209 40.000 0.00 0.00 42.53 3.71
510 511 9.705290 GAAAAAGAGGGAGTATATCATCTTCTC 57.295 37.037 0.00 0.00 35.54 2.87
511 512 9.218525 TGAAAAAGAGGGAGTATATCATCTTCT 57.781 33.333 0.00 0.00 35.54 2.85
512 513 9.487790 CTGAAAAAGAGGGAGTATATCATCTTC 57.512 37.037 0.00 0.00 35.54 2.87
513 514 8.997734 ACTGAAAAAGAGGGAGTATATCATCTT 58.002 33.333 0.00 0.00 37.19 2.40
514 515 8.560124 ACTGAAAAAGAGGGAGTATATCATCT 57.440 34.615 0.00 0.00 0.00 2.90
515 516 9.620259 AAACTGAAAAAGAGGGAGTATATCATC 57.380 33.333 0.00 0.00 0.00 2.92
521 522 9.907229 CCTTATAAACTGAAAAAGAGGGAGTAT 57.093 33.333 0.00 0.00 0.00 2.12
522 523 7.827729 GCCTTATAAACTGAAAAAGAGGGAGTA 59.172 37.037 0.00 0.00 0.00 2.59
523 524 6.659668 GCCTTATAAACTGAAAAAGAGGGAGT 59.340 38.462 0.00 0.00 0.00 3.85
524 525 6.887002 AGCCTTATAAACTGAAAAAGAGGGAG 59.113 38.462 0.00 0.00 0.00 4.30
525 526 6.790319 AGCCTTATAAACTGAAAAAGAGGGA 58.210 36.000 0.00 0.00 0.00 4.20
526 527 6.659242 TGAGCCTTATAAACTGAAAAAGAGGG 59.341 38.462 0.00 0.00 0.00 4.30
527 528 7.687941 TGAGCCTTATAAACTGAAAAAGAGG 57.312 36.000 0.00 0.00 0.00 3.69
542 543 9.857656 TGATGAGATTTTAGATTTGAGCCTTAT 57.142 29.630 0.00 0.00 0.00 1.73
543 544 9.685276 TTGATGAGATTTTAGATTTGAGCCTTA 57.315 29.630 0.00 0.00 0.00 2.69
544 545 8.465201 GTTGATGAGATTTTAGATTTGAGCCTT 58.535 33.333 0.00 0.00 0.00 4.35
545 546 7.067981 GGTTGATGAGATTTTAGATTTGAGCCT 59.932 37.037 0.00 0.00 0.00 4.58
546 547 7.148018 TGGTTGATGAGATTTTAGATTTGAGCC 60.148 37.037 0.00 0.00 0.00 4.70
547 548 7.765307 TGGTTGATGAGATTTTAGATTTGAGC 58.235 34.615 0.00 0.00 0.00 4.26
548 549 9.784680 CTTGGTTGATGAGATTTTAGATTTGAG 57.215 33.333 0.00 0.00 0.00 3.02
549 550 8.742777 CCTTGGTTGATGAGATTTTAGATTTGA 58.257 33.333 0.00 0.00 0.00 2.69
550 551 7.490402 GCCTTGGTTGATGAGATTTTAGATTTG 59.510 37.037 0.00 0.00 0.00 2.32
551 552 7.178983 TGCCTTGGTTGATGAGATTTTAGATTT 59.821 33.333 0.00 0.00 0.00 2.17
552 553 6.664816 TGCCTTGGTTGATGAGATTTTAGATT 59.335 34.615 0.00 0.00 0.00 2.40
553 554 6.096001 GTGCCTTGGTTGATGAGATTTTAGAT 59.904 38.462 0.00 0.00 0.00 1.98
554 555 5.415701 GTGCCTTGGTTGATGAGATTTTAGA 59.584 40.000 0.00 0.00 0.00 2.10
555 556 5.183713 TGTGCCTTGGTTGATGAGATTTTAG 59.816 40.000 0.00 0.00 0.00 1.85
556 557 5.076182 TGTGCCTTGGTTGATGAGATTTTA 58.924 37.500 0.00 0.00 0.00 1.52
557 558 3.896888 TGTGCCTTGGTTGATGAGATTTT 59.103 39.130 0.00 0.00 0.00 1.82
558 559 3.499338 TGTGCCTTGGTTGATGAGATTT 58.501 40.909 0.00 0.00 0.00 2.17
559 560 3.159213 TGTGCCTTGGTTGATGAGATT 57.841 42.857 0.00 0.00 0.00 2.40
560 561 2.885135 TGTGCCTTGGTTGATGAGAT 57.115 45.000 0.00 0.00 0.00 2.75
561 562 2.439409 CATGTGCCTTGGTTGATGAGA 58.561 47.619 0.00 0.00 0.00 3.27
562 563 1.475280 CCATGTGCCTTGGTTGATGAG 59.525 52.381 0.00 0.00 0.00 2.90
563 564 1.203038 ACCATGTGCCTTGGTTGATGA 60.203 47.619 6.86 0.00 45.19 2.92
564 565 1.067425 CACCATGTGCCTTGGTTGATG 60.067 52.381 9.20 0.00 45.19 3.07
565 566 1.203038 TCACCATGTGCCTTGGTTGAT 60.203 47.619 9.20 0.00 45.19 2.57
566 567 0.184692 TCACCATGTGCCTTGGTTGA 59.815 50.000 9.20 8.24 45.19 3.18
567 568 0.599558 CTCACCATGTGCCTTGGTTG 59.400 55.000 9.20 6.66 45.19 3.77
568 569 0.185901 ACTCACCATGTGCCTTGGTT 59.814 50.000 9.20 0.00 45.19 3.67
570 571 1.246056 CCACTCACCATGTGCCTTGG 61.246 60.000 0.00 5.82 40.26 3.61
571 572 0.250858 TCCACTCACCATGTGCCTTG 60.251 55.000 0.00 0.00 34.38 3.61
572 573 0.037303 CTCCACTCACCATGTGCCTT 59.963 55.000 0.00 0.00 34.38 4.35
573 574 1.681666 CTCCACTCACCATGTGCCT 59.318 57.895 0.00 0.00 34.38 4.75
574 575 1.377725 CCTCCACTCACCATGTGCC 60.378 63.158 0.00 0.00 34.38 5.01
575 576 0.036732 TTCCTCCACTCACCATGTGC 59.963 55.000 0.00 0.00 34.38 4.57
576 577 2.290514 ACATTCCTCCACTCACCATGTG 60.291 50.000 0.00 0.00 35.39 3.21
577 578 1.988107 ACATTCCTCCACTCACCATGT 59.012 47.619 0.00 0.00 0.00 3.21
578 579 2.795231 ACATTCCTCCACTCACCATG 57.205 50.000 0.00 0.00 0.00 3.66
579 580 4.302067 AGATACATTCCTCCACTCACCAT 58.698 43.478 0.00 0.00 0.00 3.55
580 581 3.706594 GAGATACATTCCTCCACTCACCA 59.293 47.826 0.00 0.00 0.00 4.17
581 582 3.243569 CGAGATACATTCCTCCACTCACC 60.244 52.174 0.00 0.00 0.00 4.02
582 583 3.381908 ACGAGATACATTCCTCCACTCAC 59.618 47.826 0.00 0.00 0.00 3.51
583 584 3.632333 ACGAGATACATTCCTCCACTCA 58.368 45.455 0.00 0.00 0.00 3.41
584 585 4.822896 AGTACGAGATACATTCCTCCACTC 59.177 45.833 0.00 0.00 36.09 3.51
585 586 4.794334 AGTACGAGATACATTCCTCCACT 58.206 43.478 0.00 0.00 36.09 4.00
586 587 5.517322 AAGTACGAGATACATTCCTCCAC 57.483 43.478 0.00 0.00 36.09 4.02
587 588 6.604396 TGTAAAGTACGAGATACATTCCTCCA 59.396 38.462 0.00 0.00 36.09 3.86
588 589 7.035840 TGTAAAGTACGAGATACATTCCTCC 57.964 40.000 0.00 0.00 36.09 4.30
589 590 8.922058 TTTGTAAAGTACGAGATACATTCCTC 57.078 34.615 0.00 0.00 36.09 3.71
590 591 9.148104 GTTTTGTAAAGTACGAGATACATTCCT 57.852 33.333 0.00 0.00 36.09 3.36
591 592 9.148104 AGTTTTGTAAAGTACGAGATACATTCC 57.852 33.333 0.00 0.00 36.09 3.01
595 596 9.793252 GGATAGTTTTGTAAAGTACGAGATACA 57.207 33.333 0.00 0.00 36.09 2.29
596 597 9.793252 TGGATAGTTTTGTAAAGTACGAGATAC 57.207 33.333 0.00 0.00 0.00 2.24
598 599 9.715121 TTTGGATAGTTTTGTAAAGTACGAGAT 57.285 29.630 0.00 0.00 0.00 2.75
599 600 8.981647 GTTTGGATAGTTTTGTAAAGTACGAGA 58.018 33.333 0.00 0.00 0.00 4.04
600 601 8.985805 AGTTTGGATAGTTTTGTAAAGTACGAG 58.014 33.333 0.00 0.00 0.00 4.18
601 602 8.891671 AGTTTGGATAGTTTTGTAAAGTACGA 57.108 30.769 0.00 0.00 0.00 3.43
610 611 9.423061 GCATCAATTTAGTTTGGATAGTTTTGT 57.577 29.630 0.00 0.00 0.00 2.83
611 612 9.421806 TGCATCAATTTAGTTTGGATAGTTTTG 57.578 29.630 0.00 0.00 0.00 2.44
619 620 9.381033 CCAATTAATGCATCAATTTAGTTTGGA 57.619 29.630 4.98 0.00 0.00 3.53
620 621 8.614346 CCCAATTAATGCATCAATTTAGTTTGG 58.386 33.333 4.98 4.47 0.00 3.28
621 622 9.381033 TCCCAATTAATGCATCAATTTAGTTTG 57.619 29.630 4.98 0.00 0.00 2.93
637 638 6.839454 TGCATTGCCATTAATCCCAATTAAT 58.161 32.000 6.12 0.00 44.99 1.40
638 639 6.244552 TGCATTGCCATTAATCCCAATTAA 57.755 33.333 6.12 0.00 40.64 1.40
639 640 5.883685 TGCATTGCCATTAATCCCAATTA 57.116 34.783 6.12 0.24 0.00 1.40
640 641 4.774660 TGCATTGCCATTAATCCCAATT 57.225 36.364 6.12 0.00 0.00 2.32
641 642 4.647611 CATGCATTGCCATTAATCCCAAT 58.352 39.130 6.12 4.89 0.00 3.16
642 643 3.744846 GCATGCATTGCCATTAATCCCAA 60.745 43.478 14.21 1.11 46.15 4.12
643 644 2.224329 GCATGCATTGCCATTAATCCCA 60.224 45.455 14.21 0.00 46.15 4.37
644 645 2.419667 GCATGCATTGCCATTAATCCC 58.580 47.619 14.21 0.00 46.15 3.85
653 654 8.397096 ATCTAGTCAAGAATGCATGCATTGCC 62.397 42.308 42.33 30.32 45.50 4.52
654 655 5.507482 ATCTAGTCAAGAATGCATGCATTGC 60.507 40.000 42.33 31.78 45.50 3.56
655 656 5.494632 TCTAGTCAAGAATGCATGCATTG 57.505 39.130 42.33 31.40 45.50 2.82
656 657 7.501559 ACTTATCTAGTCAAGAATGCATGCATT 59.498 33.333 39.06 39.06 40.07 3.56
657 658 6.996879 ACTTATCTAGTCAAGAATGCATGCAT 59.003 34.615 27.46 27.46 37.89 3.96
658 659 6.351711 ACTTATCTAGTCAAGAATGCATGCA 58.648 36.000 25.04 25.04 37.89 3.96
659 660 6.857777 ACTTATCTAGTCAAGAATGCATGC 57.142 37.500 11.82 11.82 37.89 4.06
662 663 9.698309 GCTATTACTTATCTAGTCAAGAATGCA 57.302 33.333 11.43 0.00 37.89 3.96
663 664 9.698309 TGCTATTACTTATCTAGTCAAGAATGC 57.302 33.333 11.43 11.48 37.89 3.56
667 668 9.503399 TCGATGCTATTACTTATCTAGTCAAGA 57.497 33.333 11.43 0.00 38.33 3.02
688 689 3.003378 AGTCAAGAATGCATGCATCGATG 59.997 43.478 32.25 26.85 35.31 3.84
689 690 3.211865 AGTCAAGAATGCATGCATCGAT 58.788 40.909 32.25 18.14 35.31 3.59
690 691 2.635714 AGTCAAGAATGCATGCATCGA 58.364 42.857 32.25 22.01 35.31 3.59
691 692 3.805971 TCTAGTCAAGAATGCATGCATCG 59.194 43.478 32.25 20.26 35.31 3.84
692 693 5.943706 ATCTAGTCAAGAATGCATGCATC 57.056 39.130 32.25 23.62 37.89 3.91
693 694 6.996879 ACTTATCTAGTCAAGAATGCATGCAT 59.003 34.615 27.46 27.46 37.89 3.96
694 695 6.351711 ACTTATCTAGTCAAGAATGCATGCA 58.648 36.000 25.04 25.04 37.89 3.96
695 696 6.857777 ACTTATCTAGTCAAGAATGCATGC 57.142 37.500 11.82 11.82 37.89 4.06
698 699 9.698309 GCTATTACTTATCTAGTCAAGAATGCA 57.302 33.333 11.43 0.00 37.89 3.96
699 700 9.698309 TGCTATTACTTATCTAGTCAAGAATGC 57.302 33.333 11.43 11.48 37.89 3.56
703 704 8.237949 GCGATGCTATTACTTATCTAGTCAAGA 58.762 37.037 11.43 0.00 38.33 3.02
704 705 8.023706 TGCGATGCTATTACTTATCTAGTCAAG 58.976 37.037 0.00 5.03 38.33 3.02
705 706 7.882179 TGCGATGCTATTACTTATCTAGTCAA 58.118 34.615 0.00 0.00 38.33 3.18
706 707 7.448748 TGCGATGCTATTACTTATCTAGTCA 57.551 36.000 0.00 0.00 38.33 3.41
707 708 8.334016 CATGCGATGCTATTACTTATCTAGTC 57.666 38.462 0.00 0.00 38.33 2.59
724 725 0.736636 ACTCACCAATGCATGCGATG 59.263 50.000 14.09 13.97 0.00 3.84
725 726 1.402968 GAACTCACCAATGCATGCGAT 59.597 47.619 14.09 4.99 0.00 4.58
726 727 0.804364 GAACTCACCAATGCATGCGA 59.196 50.000 14.09 2.48 0.00 5.10
727 728 0.806868 AGAACTCACCAATGCATGCG 59.193 50.000 14.09 0.35 0.00 4.73
728 729 3.308438 AAAGAACTCACCAATGCATGC 57.692 42.857 11.82 11.82 0.00 4.06
751 752 8.605746 GCATTAAATCTTTGCATGCAAGAATTA 58.394 29.630 30.25 25.51 37.75 1.40
752 753 7.469260 GCATTAAATCTTTGCATGCAAGAATT 58.531 30.769 30.25 27.20 37.75 2.17
753 754 6.237996 CGCATTAAATCTTTGCATGCAAGAAT 60.238 34.615 30.25 23.78 37.72 2.40
754 755 5.062433 CGCATTAAATCTTTGCATGCAAGAA 59.938 36.000 30.25 22.73 37.72 2.52
755 756 4.563580 CGCATTAAATCTTTGCATGCAAGA 59.436 37.500 30.25 27.10 37.72 3.02
756 757 4.780946 GCGCATTAAATCTTTGCATGCAAG 60.781 41.667 30.25 23.49 37.72 4.01
757 758 3.062369 GCGCATTAAATCTTTGCATGCAA 59.938 39.130 28.80 28.80 37.72 4.08
758 759 2.604011 GCGCATTAAATCTTTGCATGCA 59.396 40.909 18.46 18.46 37.72 3.96
759 760 2.033492 GGCGCATTAAATCTTTGCATGC 60.033 45.455 11.82 11.82 36.15 4.06
760 761 3.450578 AGGCGCATTAAATCTTTGCATG 58.549 40.909 10.83 0.00 36.15 4.06
761 762 3.806625 AGGCGCATTAAATCTTTGCAT 57.193 38.095 10.83 0.00 36.15 3.96
762 763 3.591196 AAGGCGCATTAAATCTTTGCA 57.409 38.095 5.03 0.00 36.15 4.08
763 764 4.920376 TCTAAGGCGCATTAAATCTTTGC 58.080 39.130 16.03 0.00 0.00 3.68
764 765 7.420800 AGATTCTAAGGCGCATTAAATCTTTG 58.579 34.615 27.27 15.66 30.03 2.77
765 766 7.573968 AGATTCTAAGGCGCATTAAATCTTT 57.426 32.000 27.27 17.12 30.03 2.52
766 767 7.573968 AAGATTCTAAGGCGCATTAAATCTT 57.426 32.000 31.39 31.39 37.23 2.40
767 768 8.677148 TTAAGATTCTAAGGCGCATTAAATCT 57.323 30.769 27.27 27.27 34.40 2.40
768 769 9.730420 TTTTAAGATTCTAAGGCGCATTAAATC 57.270 29.630 25.17 25.17 0.00 2.17
769 770 9.736023 CTTTTAAGATTCTAAGGCGCATTAAAT 57.264 29.630 16.03 16.27 0.00 1.40
770 771 8.188139 CCTTTTAAGATTCTAAGGCGCATTAAA 58.812 33.333 16.03 12.64 31.59 1.52
771 772 7.554835 TCCTTTTAAGATTCTAAGGCGCATTAA 59.445 33.333 16.03 4.10 37.62 1.40
772 773 7.051623 TCCTTTTAAGATTCTAAGGCGCATTA 58.948 34.615 14.47 14.47 37.62 1.90
773 774 5.885912 TCCTTTTAAGATTCTAAGGCGCATT 59.114 36.000 13.52 13.52 37.62 3.56
774 775 5.437060 TCCTTTTAAGATTCTAAGGCGCAT 58.563 37.500 10.83 0.00 37.62 4.73
775 776 4.839121 TCCTTTTAAGATTCTAAGGCGCA 58.161 39.130 10.83 0.00 37.62 6.09
776 777 5.116882 TCTCCTTTTAAGATTCTAAGGCGC 58.883 41.667 0.00 0.00 37.62 6.53
777 778 6.203723 CCATCTCCTTTTAAGATTCTAAGGCG 59.796 42.308 8.34 3.87 37.62 5.52
778 779 7.283329 TCCATCTCCTTTTAAGATTCTAAGGC 58.717 38.462 8.34 0.00 37.62 4.35
779 780 8.709308 TCTCCATCTCCTTTTAAGATTCTAAGG 58.291 37.037 7.22 7.22 38.78 2.69
782 783 9.439461 TCATCTCCATCTCCTTTTAAGATTCTA 57.561 33.333 0.00 0.00 31.05 2.10
783 784 8.329346 TCATCTCCATCTCCTTTTAAGATTCT 57.671 34.615 0.00 0.00 31.05 2.40
784 785 7.173047 GCTCATCTCCATCTCCTTTTAAGATTC 59.827 40.741 0.00 0.00 31.05 2.52
785 786 6.997476 GCTCATCTCCATCTCCTTTTAAGATT 59.003 38.462 0.00 0.00 31.05 2.40
786 787 6.465607 GGCTCATCTCCATCTCCTTTTAAGAT 60.466 42.308 0.00 0.00 33.74 2.40
787 788 5.163258 GGCTCATCTCCATCTCCTTTTAAGA 60.163 44.000 0.00 0.00 0.00 2.10
788 789 5.062528 GGCTCATCTCCATCTCCTTTTAAG 58.937 45.833 0.00 0.00 0.00 1.85
789 790 4.141390 GGGCTCATCTCCATCTCCTTTTAA 60.141 45.833 0.00 0.00 0.00 1.52
790 791 3.392616 GGGCTCATCTCCATCTCCTTTTA 59.607 47.826 0.00 0.00 0.00 1.52
791 792 2.174424 GGGCTCATCTCCATCTCCTTTT 59.826 50.000 0.00 0.00 0.00 2.27
792 793 1.773653 GGGCTCATCTCCATCTCCTTT 59.226 52.381 0.00 0.00 0.00 3.11
793 794 1.061502 AGGGCTCATCTCCATCTCCTT 60.062 52.381 0.00 0.00 0.00 3.36
794 795 0.567182 AGGGCTCATCTCCATCTCCT 59.433 55.000 0.00 0.00 0.00 3.69
795 796 1.433121 AAGGGCTCATCTCCATCTCC 58.567 55.000 0.00 0.00 0.00 3.71
796 797 4.696479 TTAAAGGGCTCATCTCCATCTC 57.304 45.455 0.00 0.00 0.00 2.75
797 798 5.629125 GATTTAAAGGGCTCATCTCCATCT 58.371 41.667 0.00 0.00 0.00 2.90
798 799 4.453819 CGATTTAAAGGGCTCATCTCCATC 59.546 45.833 0.00 0.00 0.00 3.51
799 800 4.392940 CGATTTAAAGGGCTCATCTCCAT 58.607 43.478 0.00 0.00 0.00 3.41
800 801 3.433598 CCGATTTAAAGGGCTCATCTCCA 60.434 47.826 0.00 0.00 0.00 3.86
801 802 3.142174 CCGATTTAAAGGGCTCATCTCC 58.858 50.000 0.00 0.00 0.00 3.71
802 803 4.073293 TCCGATTTAAAGGGCTCATCTC 57.927 45.455 3.72 0.00 0.00 2.75
803 804 4.503714 TTCCGATTTAAAGGGCTCATCT 57.496 40.909 3.72 0.00 0.00 2.90
804 805 5.576447 TTTTCCGATTTAAAGGGCTCATC 57.424 39.130 3.72 0.00 0.00 2.92
805 806 5.993748 TTTTTCCGATTTAAAGGGCTCAT 57.006 34.783 3.72 0.00 0.00 2.90
806 807 5.478679 TCATTTTTCCGATTTAAAGGGCTCA 59.521 36.000 3.72 0.00 0.00 4.26
807 808 5.961272 TCATTTTTCCGATTTAAAGGGCTC 58.039 37.500 3.72 0.00 0.00 4.70
808 809 5.993748 TCATTTTTCCGATTTAAAGGGCT 57.006 34.783 3.72 0.00 0.00 5.19
809 810 7.428282 TTTTCATTTTTCCGATTTAAAGGGC 57.572 32.000 3.72 0.00 0.00 5.19
836 837 9.555727 CTTTTCGGTTTATAGGGATTATCTCAA 57.444 33.333 0.00 0.00 0.00 3.02
837 838 8.154856 CCTTTTCGGTTTATAGGGATTATCTCA 58.845 37.037 0.00 0.00 0.00 3.27
838 839 8.373220 TCCTTTTCGGTTTATAGGGATTATCTC 58.627 37.037 0.00 0.00 0.00 2.75
839 840 8.271398 TCCTTTTCGGTTTATAGGGATTATCT 57.729 34.615 0.00 0.00 0.00 1.98
840 841 7.606839 CCTCCTTTTCGGTTTATAGGGATTATC 59.393 40.741 0.00 0.00 0.00 1.75
841 842 7.459234 CCTCCTTTTCGGTTTATAGGGATTAT 58.541 38.462 0.00 0.00 0.00 1.28
842 843 6.183361 CCCTCCTTTTCGGTTTATAGGGATTA 60.183 42.308 0.00 0.00 42.15 1.75
843 844 5.398695 CCCTCCTTTTCGGTTTATAGGGATT 60.399 44.000 0.00 0.00 42.15 3.01
844 845 4.104261 CCCTCCTTTTCGGTTTATAGGGAT 59.896 45.833 0.00 0.00 42.15 3.85
845 846 3.457012 CCCTCCTTTTCGGTTTATAGGGA 59.543 47.826 0.00 0.00 42.15 4.20
846 847 3.457012 TCCCTCCTTTTCGGTTTATAGGG 59.543 47.826 0.00 0.00 41.33 3.53
847 848 4.163649 ACTCCCTCCTTTTCGGTTTATAGG 59.836 45.833 0.00 0.00 0.00 2.57
848 849 5.354842 ACTCCCTCCTTTTCGGTTTATAG 57.645 43.478 0.00 0.00 0.00 1.31
849 850 7.441903 AATACTCCCTCCTTTTCGGTTTATA 57.558 36.000 0.00 0.00 0.00 0.98
850 851 5.970501 ATACTCCCTCCTTTTCGGTTTAT 57.029 39.130 0.00 0.00 0.00 1.40
851 852 5.767277 AATACTCCCTCCTTTTCGGTTTA 57.233 39.130 0.00 0.00 0.00 2.01
852 853 4.652679 AATACTCCCTCCTTTTCGGTTT 57.347 40.909 0.00 0.00 0.00 3.27
853 854 5.970501 ATAATACTCCCTCCTTTTCGGTT 57.029 39.130 0.00 0.00 0.00 4.44
854 855 6.379579 TCTATAATACTCCCTCCTTTTCGGT 58.620 40.000 0.00 0.00 0.00 4.69
855 856 6.912951 TCTATAATACTCCCTCCTTTTCGG 57.087 41.667 0.00 0.00 0.00 4.30
856 857 7.723324 TGTTCTATAATACTCCCTCCTTTTCG 58.277 38.462 0.00 0.00 0.00 3.46
857 858 8.925338 TCTGTTCTATAATACTCCCTCCTTTTC 58.075 37.037 0.00 0.00 0.00 2.29
858 859 8.855804 TCTGTTCTATAATACTCCCTCCTTTT 57.144 34.615 0.00 0.00 0.00 2.27
859 860 8.855804 TTCTGTTCTATAATACTCCCTCCTTT 57.144 34.615 0.00 0.00 0.00 3.11
860 861 8.855804 TTTCTGTTCTATAATACTCCCTCCTT 57.144 34.615 0.00 0.00 0.00 3.36
861 862 8.855804 TTTTCTGTTCTATAATACTCCCTCCT 57.144 34.615 0.00 0.00 0.00 3.69
971 1385 2.492773 GGGAAATGGGCAGCGGATG 61.493 63.158 0.00 0.00 0.00 3.51
1158 1572 2.670592 TCGAAGTCCGACTCCGCA 60.671 61.111 1.70 0.00 43.23 5.69
1184 1598 4.112341 AGACGGTGTCGCGGTAGC 62.112 66.667 6.13 4.31 40.63 3.58
1328 1742 4.201753 CGTGCTTACAGGAATCAATCAGTG 60.202 45.833 0.00 0.00 33.41 3.66
1409 1841 2.534349 CGAGGATTACAAATCGACACCG 59.466 50.000 0.00 0.00 37.35 4.94
1454 1889 2.027561 ACGGAACAAATCGAAGGATGGA 60.028 45.455 0.00 0.00 31.83 3.41
1552 1988 3.155167 GGGACAGCGACCCCCTAG 61.155 72.222 4.88 0.00 41.38 3.02
1618 2057 3.118702 ACTCAGGATGACATGCTTCTCAG 60.119 47.826 6.74 3.98 42.56 3.35
1693 2142 2.620585 GGCTGATCCTACATTTCCTTGC 59.379 50.000 0.00 0.00 0.00 4.01
1732 2181 2.875933 TGATTCACAACCGAGGTTCAAC 59.124 45.455 4.25 0.00 36.00 3.18
1841 2290 9.810545 GGCAAAGTCAGATTATAGATATACTCC 57.189 37.037 0.00 0.00 0.00 3.85
1842 2291 9.509855 CGGCAAAGTCAGATTATAGATATACTC 57.490 37.037 0.00 0.00 0.00 2.59
1843 2292 7.976734 GCGGCAAAGTCAGATTATAGATATACT 59.023 37.037 0.00 0.00 0.00 2.12
1844 2293 7.976734 AGCGGCAAAGTCAGATTATAGATATAC 59.023 37.037 1.45 0.00 0.00 1.47
1845 2294 8.067751 AGCGGCAAAGTCAGATTATAGATATA 57.932 34.615 1.45 0.00 0.00 0.86
1846 2295 6.940739 AGCGGCAAAGTCAGATTATAGATAT 58.059 36.000 1.45 0.00 0.00 1.63
1847 2296 6.346477 AGCGGCAAAGTCAGATTATAGATA 57.654 37.500 1.45 0.00 0.00 1.98
1871 2320 9.419297 GTCTGTTTCATAAGTACAGTACATCAA 57.581 33.333 13.37 0.00 40.08 2.57
1912 2397 6.183360 ACCTATCATAATGCAGATAGCCTAGC 60.183 42.308 12.89 0.00 44.83 3.42
1953 2438 6.044682 ACGGGTAGCAGTAAACATAACATAC 58.955 40.000 0.00 0.00 0.00 2.39
1957 2442 3.867493 GGACGGGTAGCAGTAAACATAAC 59.133 47.826 0.00 0.00 0.00 1.89
1985 2470 3.057019 GTTCGTGTTGATGCAGACTACA 58.943 45.455 0.00 0.00 0.00 2.74
2013 2498 0.111061 ACAGGGCAGTGCAGAATCAA 59.889 50.000 18.61 0.00 0.00 2.57
2041 2526 4.820894 AGAAAAGCCTCTAACGTATGGT 57.179 40.909 0.00 0.00 0.00 3.55
2113 2598 9.438291 CAAATCAAAAGATCCGTTATACATCAC 57.562 33.333 0.00 0.00 0.00 3.06
2225 2710 7.039993 TCACGAGCTAGCAAAGTCCATATATTA 60.040 37.037 18.83 0.00 0.00 0.98
2226 2711 5.928839 CACGAGCTAGCAAAGTCCATATATT 59.071 40.000 18.83 0.00 0.00 1.28
2234 2719 5.975410 ATATTTCACGAGCTAGCAAAGTC 57.025 39.130 18.83 4.44 0.00 3.01
2263 2748 5.104374 GTGAACAATTACCTCATGCAATGG 58.896 41.667 0.00 0.00 46.73 3.16
2286 2771 0.447801 GTAAGTTCACATGCCGCTGG 59.552 55.000 0.00 0.00 0.00 4.85
2305 2790 1.006086 TGCAGATTGTAATGCCGTCG 58.994 50.000 0.00 0.00 41.85 5.12
2385 2873 6.489127 TGTAACTAAATGTGCACATGGTAC 57.511 37.500 31.98 28.23 36.56 3.34
2391 2879 9.838975 CTTAATTCATGTAACTAAATGTGCACA 57.161 29.630 24.08 24.08 0.00 4.57
2392 2880 9.840427 ACTTAATTCATGTAACTAAATGTGCAC 57.160 29.630 10.75 10.75 0.00 4.57
2419 2907 9.754382 GAGCAAAATATGGACAAACATCAATAT 57.246 29.630 0.00 0.00 32.39 1.28
2420 2908 8.970020 AGAGCAAAATATGGACAAACATCAATA 58.030 29.630 0.00 0.00 32.39 1.90
2421 2909 7.844009 AGAGCAAAATATGGACAAACATCAAT 58.156 30.769 0.00 0.00 32.39 2.57
2422 2910 7.230849 AGAGCAAAATATGGACAAACATCAA 57.769 32.000 0.00 0.00 32.39 2.57
2423 2911 6.127647 GGAGAGCAAAATATGGACAAACATCA 60.128 38.462 0.00 0.00 32.39 3.07
2424 2912 6.127647 TGGAGAGCAAAATATGGACAAACATC 60.128 38.462 0.00 0.00 32.39 3.06
2425 2913 5.716228 TGGAGAGCAAAATATGGACAAACAT 59.284 36.000 0.00 0.00 34.90 2.71
2426 2914 5.076182 TGGAGAGCAAAATATGGACAAACA 58.924 37.500 0.00 0.00 0.00 2.83
2427 2915 5.643379 TGGAGAGCAAAATATGGACAAAC 57.357 39.130 0.00 0.00 0.00 2.93
2428 2916 6.211184 ACAATGGAGAGCAAAATATGGACAAA 59.789 34.615 0.00 0.00 0.00 2.83
2429 2917 5.716228 ACAATGGAGAGCAAAATATGGACAA 59.284 36.000 0.00 0.00 0.00 3.18
2430 2918 5.125900 CACAATGGAGAGCAAAATATGGACA 59.874 40.000 0.00 0.00 0.00 4.02
2431 2919 5.585390 CACAATGGAGAGCAAAATATGGAC 58.415 41.667 0.00 0.00 0.00 4.02
2432 2920 4.098349 GCACAATGGAGAGCAAAATATGGA 59.902 41.667 0.00 0.00 0.00 3.41
2433 2921 4.142116 TGCACAATGGAGAGCAAAATATGG 60.142 41.667 0.00 0.00 33.48 2.74
2434 2922 4.802039 GTGCACAATGGAGAGCAAAATATG 59.198 41.667 13.17 0.00 38.91 1.78
2435 2923 4.708421 AGTGCACAATGGAGAGCAAAATAT 59.292 37.500 21.04 0.00 38.91 1.28
2436 2924 4.081406 AGTGCACAATGGAGAGCAAAATA 58.919 39.130 21.04 0.00 38.91 1.40
2437 2925 2.895404 AGTGCACAATGGAGAGCAAAAT 59.105 40.909 21.04 0.00 38.91 1.82
2438 2926 2.309613 AGTGCACAATGGAGAGCAAAA 58.690 42.857 21.04 0.00 38.91 2.44
2439 2927 1.985473 AGTGCACAATGGAGAGCAAA 58.015 45.000 21.04 0.00 38.91 3.68
2440 2928 1.985473 AAGTGCACAATGGAGAGCAA 58.015 45.000 21.04 0.00 38.91 3.91
2441 2929 2.857186 TAAGTGCACAATGGAGAGCA 57.143 45.000 21.04 0.00 34.10 4.26
2442 2930 4.708726 AAATAAGTGCACAATGGAGAGC 57.291 40.909 21.04 0.00 0.00 4.09
2512 3002 1.029408 AGTGCTCGTGTGTTTTGCCA 61.029 50.000 0.00 0.00 0.00 4.92
2561 3052 1.135915 CGATCTGTGGCAGCTACTCTT 59.864 52.381 10.64 0.00 0.00 2.85
2722 3224 4.216042 GGATCGCCTAGAGTAACTAAGGAC 59.784 50.000 0.00 0.00 0.00 3.85
2736 3240 1.687123 GGAGTTGCTTAGGATCGCCTA 59.313 52.381 0.00 0.00 44.74 3.93
2858 3364 4.987285 TGGCGAAGTATACGTTGTGTTTTA 59.013 37.500 7.73 0.00 0.00 1.52
3075 3590 4.798882 TGGAAACCATACAACACCTCTTT 58.201 39.130 0.00 0.00 0.00 2.52
3138 3655 1.689273 AGAGATAACCTAGCCAAGCGG 59.311 52.381 0.00 0.00 0.00 5.52
3141 3658 5.242838 CCTGACTAGAGATAACCTAGCCAAG 59.757 48.000 0.00 0.00 37.67 3.61
3177 3694 4.320608 TGTTTTCCTTTGGCTGATGTTC 57.679 40.909 0.00 0.00 0.00 3.18
3204 3721 2.365293 AGGCATGTTTCCTGTTTCCAAC 59.635 45.455 0.00 0.00 31.53 3.77
3209 3726 2.380064 TGGAGGCATGTTTCCTGTTT 57.620 45.000 15.65 0.00 33.24 2.83
3211 3728 2.173519 CAATGGAGGCATGTTTCCTGT 58.826 47.619 15.65 5.27 33.24 4.00
3212 3729 2.094390 CACAATGGAGGCATGTTTCCTG 60.094 50.000 15.65 10.50 33.24 3.86
3213 3730 2.173519 CACAATGGAGGCATGTTTCCT 58.826 47.619 15.65 4.85 36.46 3.36
3214 3731 1.404583 GCACAATGGAGGCATGTTTCC 60.405 52.381 9.83 9.83 0.00 3.13
3215 3732 1.273048 TGCACAATGGAGGCATGTTTC 59.727 47.619 0.00 0.00 31.58 2.78
3216 3733 1.001181 GTGCACAATGGAGGCATGTTT 59.999 47.619 13.17 0.00 40.05 2.83
3217 3734 0.604578 GTGCACAATGGAGGCATGTT 59.395 50.000 13.17 0.00 40.05 2.71
3218 3735 0.540133 TGTGCACAATGGAGGCATGT 60.540 50.000 19.28 0.00 40.05 3.21
3219 3736 0.821517 ATGTGCACAATGGAGGCATG 59.178 50.000 25.72 0.00 40.05 4.06
3220 3737 1.563924 AATGTGCACAATGGAGGCAT 58.436 45.000 25.72 0.00 40.05 4.40
3221 3738 1.340088 AAATGTGCACAATGGAGGCA 58.660 45.000 25.72 0.00 34.70 4.75
3222 3739 2.493278 ACTAAATGTGCACAATGGAGGC 59.507 45.455 25.72 0.00 0.00 4.70
3223 3740 4.789012 AACTAAATGTGCACAATGGAGG 57.211 40.909 25.72 13.93 0.00 4.30
3224 3741 6.252967 TGTAACTAAATGTGCACAATGGAG 57.747 37.500 25.72 19.55 0.00 3.86
3225 3742 6.432472 TCATGTAACTAAATGTGCACAATGGA 59.568 34.615 25.72 8.71 31.18 3.41
3226 3743 6.619744 TCATGTAACTAAATGTGCACAATGG 58.380 36.000 25.72 19.26 31.18 3.16
3227 3744 8.692110 ATTCATGTAACTAAATGTGCACAATG 57.308 30.769 25.72 18.44 31.18 2.82
3228 3745 8.522003 TGATTCATGTAACTAAATGTGCACAAT 58.478 29.630 25.72 13.73 31.18 2.71
3229 3746 7.880105 TGATTCATGTAACTAAATGTGCACAA 58.120 30.769 25.72 6.58 31.18 3.33
3341 3990 6.032039 AGGGCCACTGAATATGATAATAGGA 58.968 40.000 6.18 0.00 0.00 2.94
3446 4095 3.072915 TCGTTAGGATAGGGGTCGTCATA 59.927 47.826 0.00 0.00 0.00 2.15
3530 4179 2.573915 AGGGGAAGCTTGGAACTCTAAG 59.426 50.000 2.10 0.00 37.48 2.18
3566 4215 5.600484 CCTATCTGGATGTAGGTTCAGTTCT 59.400 44.000 0.00 0.00 38.35 3.01
3569 4218 4.651503 CACCTATCTGGATGTAGGTTCAGT 59.348 45.833 1.49 0.00 46.51 3.41
3650 4299 1.273886 AGTTTCTCAGCTTCCTCGACC 59.726 52.381 0.00 0.00 0.00 4.79
3700 4349 2.030027 AGGGTGATCTGTGGAGTTCA 57.970 50.000 0.00 0.00 0.00 3.18
3711 4360 1.291132 GCGTTCTTGCTAGGGTGATC 58.709 55.000 0.00 0.00 0.00 2.92
3740 4389 1.228124 GGGGCTGTTGTACTGTGCA 60.228 57.895 0.00 0.00 0.00 4.57
3940 4599 5.413833 ACATCCATTGTGTCACTTCTTCATC 59.586 40.000 4.27 0.00 37.11 2.92
3993 4653 3.727079 GCTGAGTTGCGTTGATCATTCTG 60.727 47.826 0.00 0.00 0.00 3.02
4007 4667 1.729472 CGGTCGACAGTAGCTGAGTTG 60.729 57.143 18.91 0.00 35.18 3.16
4010 4670 0.803117 TTCGGTCGACAGTAGCTGAG 59.197 55.000 18.91 0.00 35.18 3.35
4015 4675 1.990799 TTGCATTCGGTCGACAGTAG 58.009 50.000 18.91 8.88 0.00 2.57
4018 4678 1.148310 ACTTTGCATTCGGTCGACAG 58.852 50.000 18.91 14.28 0.00 3.51
4039 4699 9.968870 GCATTTCATAGCTTTAGTACTAGTAGT 57.031 33.333 14.57 14.57 0.00 2.73
4040 4700 9.413048 GGCATTTCATAGCTTTAGTACTAGTAG 57.587 37.037 1.87 6.27 0.00 2.57
4041 4701 8.920174 TGGCATTTCATAGCTTTAGTACTAGTA 58.080 33.333 2.23 0.00 0.00 1.82
4042 4702 7.711339 GTGGCATTTCATAGCTTTAGTACTAGT 59.289 37.037 0.00 0.00 0.00 2.57
4043 4703 7.928706 AGTGGCATTTCATAGCTTTAGTACTAG 59.071 37.037 2.23 0.00 0.00 2.57
4051 4711 3.515330 GCAGTGGCATTTCATAGCTTT 57.485 42.857 0.00 0.00 40.72 3.51
4084 4744 9.998106 GGTAGCAGTATATTTTTCTGGAAGATA 57.002 33.333 0.00 0.00 46.36 1.98
4140 4800 0.179056 TCTTTCGGCGGATTCATCCC 60.179 55.000 7.21 0.00 44.24 3.85
4141 4801 1.330829 GTTCTTTCGGCGGATTCATCC 59.669 52.381 7.21 0.00 43.65 3.51
4142 4802 2.030946 CAGTTCTTTCGGCGGATTCATC 59.969 50.000 7.21 0.00 0.00 2.92
4143 4803 2.009774 CAGTTCTTTCGGCGGATTCAT 58.990 47.619 7.21 0.00 0.00 2.57
4144 4804 1.438651 CAGTTCTTTCGGCGGATTCA 58.561 50.000 7.21 0.00 0.00 2.57
4145 4805 0.727398 CCAGTTCTTTCGGCGGATTC 59.273 55.000 7.21 0.00 0.00 2.52
4146 4806 0.676782 CCCAGTTCTTTCGGCGGATT 60.677 55.000 7.21 0.00 0.00 3.01
4147 4807 1.078426 CCCAGTTCTTTCGGCGGAT 60.078 57.895 7.21 0.00 0.00 4.18
4148 4808 2.345991 CCCAGTTCTTTCGGCGGA 59.654 61.111 7.21 0.00 0.00 5.54
4149 4809 2.032071 ACCCAGTTCTTTCGGCGG 59.968 61.111 7.21 0.00 0.00 6.13
4150 4810 0.673644 ATGACCCAGTTCTTTCGGCG 60.674 55.000 0.00 0.00 0.00 6.46
4151 4811 2.396590 TATGACCCAGTTCTTTCGGC 57.603 50.000 0.00 0.00 0.00 5.54
4152 4812 4.202245 TCTTATGACCCAGTTCTTTCGG 57.798 45.455 0.00 0.00 0.00 4.30
4153 4813 5.178797 ACATCTTATGACCCAGTTCTTTCG 58.821 41.667 0.00 0.00 0.00 3.46
4154 4814 7.454260 AAACATCTTATGACCCAGTTCTTTC 57.546 36.000 0.00 0.00 0.00 2.62
4155 4815 7.839680 AAAACATCTTATGACCCAGTTCTTT 57.160 32.000 0.00 0.00 0.00 2.52
4156 4816 7.287696 ACAAAAACATCTTATGACCCAGTTCTT 59.712 33.333 0.00 0.00 0.00 2.52
4157 4817 6.777580 ACAAAAACATCTTATGACCCAGTTCT 59.222 34.615 0.00 0.00 0.00 3.01
4158 4818 6.981722 ACAAAAACATCTTATGACCCAGTTC 58.018 36.000 0.00 0.00 0.00 3.01
4159 4819 6.976934 ACAAAAACATCTTATGACCCAGTT 57.023 33.333 0.00 0.00 0.00 3.16
4160 4820 7.309194 GCTTACAAAAACATCTTATGACCCAGT 60.309 37.037 0.00 0.00 0.00 4.00
4161 4821 7.029563 GCTTACAAAAACATCTTATGACCCAG 58.970 38.462 0.00 0.00 0.00 4.45
4162 4822 6.719370 AGCTTACAAAAACATCTTATGACCCA 59.281 34.615 0.00 0.00 0.00 4.51
4163 4823 7.158099 AGCTTACAAAAACATCTTATGACCC 57.842 36.000 0.00 0.00 0.00 4.46
4164 4824 8.947115 ACTAGCTTACAAAAACATCTTATGACC 58.053 33.333 0.00 0.00 0.00 4.02
4170 4830 9.502091 TGATGTACTAGCTTACAAAAACATCTT 57.498 29.630 11.92 0.00 41.46 2.40
4171 4831 9.155975 CTGATGTACTAGCTTACAAAAACATCT 57.844 33.333 11.92 0.00 41.46 2.90
4172 4832 8.936864 ACTGATGTACTAGCTTACAAAAACATC 58.063 33.333 2.47 8.18 41.34 3.06
4173 4833 8.848474 ACTGATGTACTAGCTTACAAAAACAT 57.152 30.769 2.47 0.00 35.60 2.71
4174 4834 7.386848 GGACTGATGTACTAGCTTACAAAAACA 59.613 37.037 2.47 1.80 35.60 2.83
4175 4835 7.603024 AGGACTGATGTACTAGCTTACAAAAAC 59.397 37.037 2.47 0.00 35.14 2.43
4184 4844 6.836527 AGTTGATTAGGACTGATGTACTAGCT 59.163 38.462 0.00 0.00 40.41 3.32
4212 4872 3.133721 GGCACTGATCCTTGTCTGACTAT 59.866 47.826 9.51 0.00 0.00 2.12
4233 4893 0.397941 TCTTGAGTGGAAGGCACAGG 59.602 55.000 0.00 0.00 0.00 4.00
4234 4894 2.486472 ATCTTGAGTGGAAGGCACAG 57.514 50.000 0.00 0.00 0.00 3.66
4235 4895 3.582647 TCTTATCTTGAGTGGAAGGCACA 59.417 43.478 0.00 0.00 0.00 4.57
4236 4896 4.187694 CTCTTATCTTGAGTGGAAGGCAC 58.812 47.826 0.00 0.00 0.00 5.01
4237 4897 3.369892 GCTCTTATCTTGAGTGGAAGGCA 60.370 47.826 0.00 0.00 34.30 4.75
4238 4898 3.202097 GCTCTTATCTTGAGTGGAAGGC 58.798 50.000 0.00 0.00 34.30 4.35
4302 4962 4.204168 CGACTTTTGTGTCCGTTTCAATTG 59.796 41.667 0.00 0.00 33.70 2.32
4303 4963 4.347813 CGACTTTTGTGTCCGTTTCAATT 58.652 39.130 0.00 0.00 33.70 2.32
4329 4989 1.612950 TCTGTTTAGGTCGGTGCGTTA 59.387 47.619 0.00 0.00 0.00 3.18
4704 5707 1.670087 CGTCAGACGAGCAAGGTCATT 60.670 52.381 18.63 0.00 46.05 2.57
4808 5811 1.042229 TCAAACAGCTTGCAGGCATT 58.958 45.000 23.85 13.68 34.76 3.56
4810 5813 1.735360 GTCAAACAGCTTGCAGGCA 59.265 52.632 23.85 0.00 34.76 4.75
4875 5878 4.452795 TCCGAGTCGCAAAATAAAATGTGA 59.547 37.500 7.12 0.00 33.94 3.58
4880 5883 5.811399 ATCATCCGAGTCGCAAAATAAAA 57.189 34.783 7.12 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.