Multiple sequence alignment - TraesCS3D01G164200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G164200 chr3D 100.000 6234 0 0 1 6234 135730797 135737030 0.000000e+00 11513.0
1 TraesCS3D01G164200 chr3D 97.243 544 14 1 5688 6230 135742611 135743154 0.000000e+00 920.0
2 TraesCS3D01G164200 chr3D 98.747 479 6 0 1 479 598105361 598104883 0.000000e+00 852.0
3 TraesCS3D01G164200 chr3D 98.742 477 5 1 1 476 337025006 337025482 0.000000e+00 846.0
4 TraesCS3D01G164200 chr3D 98.539 479 7 0 1 479 522761109 522760631 0.000000e+00 846.0
5 TraesCS3D01G164200 chr3D 98.529 476 7 0 1 476 213058113 213058588 0.000000e+00 841.0
6 TraesCS3D01G164200 chr3D 93.958 480 18 4 1 479 56547130 56546661 0.000000e+00 715.0
7 TraesCS3D01G164200 chr3D 82.283 508 71 16 5706 6206 526967254 526966759 7.470000e-114 422.0
8 TraesCS3D01G164200 chr3D 82.540 189 26 5 5685 5870 436129142 436129326 6.470000e-35 159.0
9 TraesCS3D01G164200 chr3D 81.522 184 29 5 5688 5870 301488363 301488542 5.040000e-31 147.0
10 TraesCS3D01G164200 chr3A 95.998 4023 108 19 474 4481 151313973 151317957 0.000000e+00 6488.0
11 TraesCS3D01G164200 chr3A 93.638 1116 27 7 4480 5553 151318061 151319174 0.000000e+00 1628.0
12 TraesCS3D01G164200 chr3A 88.387 775 51 16 3039 3812 41008592 41007856 0.000000e+00 896.0
13 TraesCS3D01G164200 chr3A 100.000 34 0 0 5598 5631 151319198 151319231 5.220000e-06 63.9
14 TraesCS3D01G164200 chr3B 94.900 4020 135 29 474 4481 193957343 193961304 0.000000e+00 6224.0
15 TraesCS3D01G164200 chr3B 94.303 1176 38 8 4480 5628 193961385 193962558 0.000000e+00 1773.0
16 TraesCS3D01G164200 chr3B 94.340 53 2 1 5635 5687 25569476 25569527 5.180000e-11 80.5
17 TraesCS3D01G164200 chr4B 88.278 1510 127 27 3039 4524 17355393 17356876 0.000000e+00 1762.0
18 TraesCS3D01G164200 chr4B 88.645 775 56 11 3039 3812 602879130 602879873 0.000000e+00 915.0
19 TraesCS3D01G164200 chr4B 94.553 257 14 0 4773 5029 17356877 17357133 1.260000e-106 398.0
20 TraesCS3D01G164200 chr2D 97.238 543 14 1 5688 6230 571854649 571854108 0.000000e+00 918.0
21 TraesCS3D01G164200 chr2D 96.869 543 17 0 5688 6230 571848380 571847838 0.000000e+00 909.0
22 TraesCS3D01G164200 chr2A 88.789 776 52 14 3039 3812 719792728 719793470 0.000000e+00 918.0
23 TraesCS3D01G164200 chr6B 88.516 775 57 11 3039 3812 673655887 673656630 0.000000e+00 909.0
24 TraesCS3D01G164200 chr6B 94.340 53 2 1 5635 5687 569306544 569306493 5.180000e-11 80.5
25 TraesCS3D01G164200 chr7D 98.956 479 5 0 1 479 27231790 27231312 0.000000e+00 857.0
26 TraesCS3D01G164200 chr7D 84.520 562 61 20 5688 6230 257599716 257600270 3.310000e-147 532.0
27 TraesCS3D01G164200 chr7D 85.171 526 60 17 5688 6206 257585106 257585620 1.990000e-144 523.0
28 TraesCS3D01G164200 chr2B 87.339 774 48 12 3040 3812 648914403 648915127 0.000000e+00 841.0
29 TraesCS3D01G164200 chr7A 86.736 671 57 15 3868 4521 364005718 364006373 0.000000e+00 717.0
30 TraesCS3D01G164200 chr7A 91.870 123 10 0 4774 4896 364006378 364006500 8.310000e-39 172.0
31 TraesCS3D01G164200 chr4A 93.528 479 20 6 2 479 335033368 335032900 0.000000e+00 702.0
32 TraesCS3D01G164200 chr5A 92.872 477 23 4 4 479 516625563 516625097 0.000000e+00 682.0
33 TraesCS3D01G164200 chr5A 92.421 475 25 4 3 476 519013972 519014436 0.000000e+00 667.0
34 TraesCS3D01G164200 chr1D 82.617 512 69 17 5706 6207 160170243 160170744 9.600000e-118 435.0
35 TraesCS3D01G164200 chr1D 84.928 418 52 9 5793 6206 160163131 160163541 4.500000e-111 412.0
36 TraesCS3D01G164200 chr1D 76.155 541 100 21 3536 4060 132856293 132855766 2.230000e-64 257.0
37 TraesCS3D01G164200 chr6D 82.283 508 71 16 5706 6206 193281074 193280579 7.470000e-114 422.0
38 TraesCS3D01G164200 chr6D 97.436 39 1 0 2419 2457 186082607 186082645 4.030000e-07 67.6
39 TraesCS3D01G164200 chr1A 78.765 405 67 15 3552 3946 166320234 166320629 2.880000e-63 254.0
40 TraesCS3D01G164200 chr1A 77.576 330 61 11 1957 2278 166319375 166319699 2.970000e-43 187.0
41 TraesCS3D01G164200 chr1B 75.970 541 101 22 3536 4060 204407273 204406746 1.040000e-62 252.0
42 TraesCS3D01G164200 chr1B 94.340 53 2 1 5635 5687 226964969 226965020 5.180000e-11 80.5
43 TraesCS3D01G164200 chr5D 88.235 85 10 0 2049 2133 375449813 375449729 1.110000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G164200 chr3D 135730797 135737030 6233 False 11513.000000 11513 100.000000 1 6234 1 chr3D.!!$F1 6233
1 TraesCS3D01G164200 chr3D 135742611 135743154 543 False 920.000000 920 97.243000 5688 6230 1 chr3D.!!$F2 542
2 TraesCS3D01G164200 chr3A 151313973 151319231 5258 False 2726.633333 6488 96.545333 474 5631 3 chr3A.!!$F1 5157
3 TraesCS3D01G164200 chr3A 41007856 41008592 736 True 896.000000 896 88.387000 3039 3812 1 chr3A.!!$R1 773
4 TraesCS3D01G164200 chr3B 193957343 193962558 5215 False 3998.500000 6224 94.601500 474 5628 2 chr3B.!!$F2 5154
5 TraesCS3D01G164200 chr4B 17355393 17357133 1740 False 1080.000000 1762 91.415500 3039 5029 2 chr4B.!!$F2 1990
6 TraesCS3D01G164200 chr4B 602879130 602879873 743 False 915.000000 915 88.645000 3039 3812 1 chr4B.!!$F1 773
7 TraesCS3D01G164200 chr2D 571854108 571854649 541 True 918.000000 918 97.238000 5688 6230 1 chr2D.!!$R2 542
8 TraesCS3D01G164200 chr2D 571847838 571848380 542 True 909.000000 909 96.869000 5688 6230 1 chr2D.!!$R1 542
9 TraesCS3D01G164200 chr2A 719792728 719793470 742 False 918.000000 918 88.789000 3039 3812 1 chr2A.!!$F1 773
10 TraesCS3D01G164200 chr6B 673655887 673656630 743 False 909.000000 909 88.516000 3039 3812 1 chr6B.!!$F1 773
11 TraesCS3D01G164200 chr7D 257599716 257600270 554 False 532.000000 532 84.520000 5688 6230 1 chr7D.!!$F2 542
12 TraesCS3D01G164200 chr7D 257585106 257585620 514 False 523.000000 523 85.171000 5688 6206 1 chr7D.!!$F1 518
13 TraesCS3D01G164200 chr2B 648914403 648915127 724 False 841.000000 841 87.339000 3040 3812 1 chr2B.!!$F1 772
14 TraesCS3D01G164200 chr7A 364005718 364006500 782 False 444.500000 717 89.303000 3868 4896 2 chr7A.!!$F1 1028
15 TraesCS3D01G164200 chr1D 160170243 160170744 501 False 435.000000 435 82.617000 5706 6207 1 chr1D.!!$F2 501
16 TraesCS3D01G164200 chr1D 132855766 132856293 527 True 257.000000 257 76.155000 3536 4060 1 chr1D.!!$R1 524
17 TraesCS3D01G164200 chr1A 166319375 166320629 1254 False 220.500000 254 78.170500 1957 3946 2 chr1A.!!$F1 1989
18 TraesCS3D01G164200 chr1B 204406746 204407273 527 True 252.000000 252 75.970000 3536 4060 1 chr1B.!!$R1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 242 0.036164 TAGTTGGTGAAGCATGGCGT 59.964 50.000 0.00 0.00 0.00 5.68 F
250 251 0.036732 AAGCATGGCGTTGAAGGAGA 59.963 50.000 0.00 0.00 0.00 3.71 F
458 459 0.107897 CTGTATTGCCACCCGTAGCA 60.108 55.000 0.00 0.00 37.18 3.49 F
674 675 0.498685 AACCTTCCTCCCCTCTTCCT 59.501 55.000 0.00 0.00 0.00 3.36 F
1523 1539 1.133025 GGTTTGTGGATGCGATCTTGG 59.867 52.381 0.00 0.00 0.00 3.61 F
2698 2776 0.847373 TTAGGTTCTTGGGGCACACA 59.153 50.000 0.00 0.00 0.00 3.72 F
3305 3463 2.982488 TGGGGGCAATAACACCAAAATT 59.018 40.909 0.00 0.00 0.00 1.82 F
4667 4999 0.779997 AGGGGAAGAACATGCAGGTT 59.220 50.000 17.91 17.91 0.00 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1311 1326 0.039527 GGACTTGGCACGCGAAAATT 60.040 50.000 15.93 0.0 0.00 1.82 R
1487 1503 1.859841 AACCCCTCAAATCCCGGACC 61.860 60.000 0.73 0.0 0.00 4.46 R
1597 1613 5.009210 CGACACCCCTAAAATCTTCAAACAA 59.991 40.000 0.00 0.0 0.00 2.83 R
1923 1942 5.301551 CAGTATCTGGTAGCTCTGATTCAGT 59.698 44.000 13.23 0.0 32.61 3.41 R
3163 3321 2.723124 ACCGATGCCAAACAAATCAC 57.277 45.000 0.00 0.0 0.00 3.06 R
4000 4183 2.645838 ACAGGAGTGCAGAAATGTGT 57.354 45.000 0.00 0.0 0.00 3.72 R
5121 5479 1.134521 ACAGCGTCTTGAGGTTGTCAA 60.135 47.619 6.92 0.0 43.26 3.18 R
5683 6063 0.107081 TTATCCGGGCGTTACATGGG 59.893 55.000 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.665185 GCTTCGTGGCGGACTTGT 60.665 61.111 0.00 0.00 0.00 3.16
20 21 2.954753 GCTTCGTGGCGGACTTGTG 61.955 63.158 0.00 0.00 0.00 3.33
21 22 1.300620 CTTCGTGGCGGACTTGTGA 60.301 57.895 0.00 0.00 0.00 3.58
22 23 0.670546 CTTCGTGGCGGACTTGTGAT 60.671 55.000 0.00 0.00 0.00 3.06
23 24 0.604073 TTCGTGGCGGACTTGTGATA 59.396 50.000 0.00 0.00 0.00 2.15
24 25 0.604073 TCGTGGCGGACTTGTGATAA 59.396 50.000 0.00 0.00 0.00 1.75
25 26 0.999406 CGTGGCGGACTTGTGATAAG 59.001 55.000 0.00 0.00 0.00 1.73
26 27 1.369625 GTGGCGGACTTGTGATAAGG 58.630 55.000 0.00 0.00 0.00 2.69
27 28 1.066430 GTGGCGGACTTGTGATAAGGA 60.066 52.381 0.00 0.00 0.00 3.36
28 29 1.626321 TGGCGGACTTGTGATAAGGAA 59.374 47.619 0.00 0.00 0.00 3.36
29 30 2.039216 TGGCGGACTTGTGATAAGGAAA 59.961 45.455 0.00 0.00 0.00 3.13
30 31 2.418976 GGCGGACTTGTGATAAGGAAAC 59.581 50.000 0.00 0.00 0.00 2.78
31 32 3.071479 GCGGACTTGTGATAAGGAAACA 58.929 45.455 0.00 0.00 0.00 2.83
32 33 3.500680 GCGGACTTGTGATAAGGAAACAA 59.499 43.478 0.00 0.00 33.06 2.83
33 34 4.156008 GCGGACTTGTGATAAGGAAACAAT 59.844 41.667 0.00 0.00 33.60 2.71
34 35 5.673818 GCGGACTTGTGATAAGGAAACAATC 60.674 44.000 0.00 0.00 33.60 2.67
54 55 4.481368 TCCAACGTAATGGATAGTGCTT 57.519 40.909 4.82 0.00 44.52 3.91
55 56 4.439057 TCCAACGTAATGGATAGTGCTTC 58.561 43.478 4.82 0.00 44.52 3.86
56 57 3.245284 CCAACGTAATGGATAGTGCTTCG 59.755 47.826 0.00 0.00 43.54 3.79
57 58 4.109766 CAACGTAATGGATAGTGCTTCGA 58.890 43.478 0.00 0.00 0.00 3.71
58 59 3.703420 ACGTAATGGATAGTGCTTCGAC 58.297 45.455 0.00 0.00 0.00 4.20
59 60 2.719556 CGTAATGGATAGTGCTTCGACG 59.280 50.000 0.00 0.00 0.00 5.12
60 61 2.225068 AATGGATAGTGCTTCGACGG 57.775 50.000 0.00 0.00 0.00 4.79
61 62 0.389391 ATGGATAGTGCTTCGACGGG 59.611 55.000 0.00 0.00 0.00 5.28
62 63 1.067582 GGATAGTGCTTCGACGGGG 59.932 63.158 0.00 0.00 0.00 5.73
63 64 1.673808 GGATAGTGCTTCGACGGGGT 61.674 60.000 0.00 0.00 0.00 4.95
64 65 0.175073 GATAGTGCTTCGACGGGGTT 59.825 55.000 0.00 0.00 0.00 4.11
65 66 0.175073 ATAGTGCTTCGACGGGGTTC 59.825 55.000 0.00 0.00 0.00 3.62
66 67 1.180456 TAGTGCTTCGACGGGGTTCA 61.180 55.000 0.00 0.00 0.00 3.18
67 68 1.375523 GTGCTTCGACGGGGTTCAT 60.376 57.895 0.00 0.00 0.00 2.57
68 69 1.375396 TGCTTCGACGGGGTTCATG 60.375 57.895 0.00 0.00 0.00 3.07
69 70 1.079405 GCTTCGACGGGGTTCATGA 60.079 57.895 0.00 0.00 0.00 3.07
70 71 0.672401 GCTTCGACGGGGTTCATGAA 60.672 55.000 3.38 3.38 0.00 2.57
71 72 1.803334 CTTCGACGGGGTTCATGAAA 58.197 50.000 10.35 0.00 0.00 2.69
72 73 1.732259 CTTCGACGGGGTTCATGAAAG 59.268 52.381 10.35 4.94 0.00 2.62
73 74 0.682852 TCGACGGGGTTCATGAAAGT 59.317 50.000 10.35 8.16 0.00 2.66
74 75 1.071071 TCGACGGGGTTCATGAAAGTT 59.929 47.619 10.35 0.00 0.00 2.66
75 76 1.463444 CGACGGGGTTCATGAAAGTTC 59.537 52.381 10.35 0.00 0.00 3.01
76 77 2.500229 GACGGGGTTCATGAAAGTTCA 58.500 47.619 10.35 0.00 42.14 3.18
92 93 8.634335 TGAAAGTTCATGAAAATGGAGATACA 57.366 30.769 10.35 0.00 31.01 2.29
93 94 8.514594 TGAAAGTTCATGAAAATGGAGATACAC 58.485 33.333 10.35 0.00 31.01 2.90
94 95 8.408043 AAAGTTCATGAAAATGGAGATACACA 57.592 30.769 10.35 0.00 0.00 3.72
95 96 8.408043 AAGTTCATGAAAATGGAGATACACAA 57.592 30.769 10.35 0.00 0.00 3.33
96 97 8.048534 AGTTCATGAAAATGGAGATACACAAG 57.951 34.615 10.35 0.00 0.00 3.16
97 98 7.667219 AGTTCATGAAAATGGAGATACACAAGT 59.333 33.333 10.35 0.00 0.00 3.16
98 99 8.946085 GTTCATGAAAATGGAGATACACAAGTA 58.054 33.333 10.35 0.00 34.10 2.24
99 100 9.513906 TTCATGAAAATGGAGATACACAAGTAA 57.486 29.630 5.45 0.00 33.13 2.24
100 101 9.166173 TCATGAAAATGGAGATACACAAGTAAG 57.834 33.333 0.00 0.00 33.13 2.34
101 102 8.950210 CATGAAAATGGAGATACACAAGTAAGT 58.050 33.333 0.00 0.00 33.13 2.24
102 103 8.322906 TGAAAATGGAGATACACAAGTAAGTG 57.677 34.615 0.00 0.00 44.93 3.16
113 114 5.751243 CACAAGTAAGTGTAAAGCCAGTT 57.249 39.130 0.00 0.00 34.83 3.16
114 115 5.510671 CACAAGTAAGTGTAAAGCCAGTTG 58.489 41.667 0.00 0.00 34.83 3.16
115 116 4.578928 ACAAGTAAGTGTAAAGCCAGTTGG 59.421 41.667 0.00 0.00 38.53 3.77
116 117 8.860517 CACAAGTAAGTGTAAAGCCAGTTGGC 62.861 46.154 15.28 15.28 46.47 4.52
125 126 2.360350 CCAGTTGGCGATGGCACT 60.360 61.111 1.01 0.00 42.47 4.40
126 127 2.693762 CCAGTTGGCGATGGCACTG 61.694 63.158 11.71 11.71 42.47 3.66
127 128 1.968017 CAGTTGGCGATGGCACTGT 60.968 57.895 10.78 0.00 42.47 3.55
128 129 1.672356 AGTTGGCGATGGCACTGTC 60.672 57.895 1.01 0.00 42.47 3.51
129 130 1.965930 GTTGGCGATGGCACTGTCA 60.966 57.895 1.01 0.00 42.47 3.58
130 131 1.002257 TTGGCGATGGCACTGTCAT 60.002 52.632 1.01 0.00 42.47 3.06
131 132 1.026182 TTGGCGATGGCACTGTCATC 61.026 55.000 12.88 12.88 40.78 2.92
141 142 7.834068 GATGGCACTGTCATCGTAAATATAT 57.166 36.000 7.86 0.00 34.95 0.86
142 143 8.256611 GATGGCACTGTCATCGTAAATATATT 57.743 34.615 7.86 0.00 34.95 1.28
143 144 9.366216 GATGGCACTGTCATCGTAAATATATTA 57.634 33.333 7.86 0.00 34.95 0.98
144 145 9.719355 ATGGCACTGTCATCGTAAATATATTAA 57.281 29.630 0.00 0.00 0.00 1.40
145 146 9.203421 TGGCACTGTCATCGTAAATATATTAAG 57.797 33.333 0.00 0.00 0.00 1.85
146 147 8.169268 GGCACTGTCATCGTAAATATATTAAGC 58.831 37.037 0.00 0.00 0.00 3.09
147 148 8.926710 GCACTGTCATCGTAAATATATTAAGCT 58.073 33.333 0.00 0.00 0.00 3.74
161 162 9.988815 AATATATTAAGCTCTGTGATTTCGACT 57.011 29.630 0.00 0.00 0.00 4.18
162 163 9.988815 ATATATTAAGCTCTGTGATTTCGACTT 57.011 29.630 0.00 0.00 0.00 3.01
163 164 6.654793 ATTAAGCTCTGTGATTTCGACTTC 57.345 37.500 0.00 0.00 0.00 3.01
164 165 3.667497 AGCTCTGTGATTTCGACTTCA 57.333 42.857 0.00 0.00 0.00 3.02
165 166 3.321497 AGCTCTGTGATTTCGACTTCAC 58.679 45.455 16.39 16.39 42.05 3.18
166 167 2.091277 GCTCTGTGATTTCGACTTCACG 59.909 50.000 17.49 13.50 44.11 4.35
167 168 3.565516 CTCTGTGATTTCGACTTCACGA 58.434 45.455 17.49 15.87 44.11 4.35
176 177 4.436242 TTCGACTTCACGAAGATAAGCT 57.564 40.909 13.60 0.00 45.21 3.74
177 178 4.436242 TCGACTTCACGAAGATAAGCTT 57.564 40.909 13.60 3.48 40.79 3.74
187 188 4.265949 GAAGATAAGCTTCGGCAACTTC 57.734 45.455 0.00 1.54 43.22 3.01
188 189 3.334583 AGATAAGCTTCGGCAACTTCA 57.665 42.857 0.00 0.00 44.74 3.02
189 190 3.003480 AGATAAGCTTCGGCAACTTCAC 58.997 45.455 0.00 0.00 44.74 3.18
190 191 1.519408 TAAGCTTCGGCAACTTCACC 58.481 50.000 0.00 0.00 44.74 4.02
191 192 0.465460 AAGCTTCGGCAACTTCACCA 60.465 50.000 0.00 0.00 44.74 4.17
192 193 0.465460 AGCTTCGGCAACTTCACCAA 60.465 50.000 0.00 0.00 44.74 3.67
193 194 0.383949 GCTTCGGCAACTTCACCAAA 59.616 50.000 0.00 0.00 41.33 3.28
194 195 1.000274 GCTTCGGCAACTTCACCAAAT 60.000 47.619 0.00 0.00 41.33 2.32
195 196 2.545742 GCTTCGGCAACTTCACCAAATT 60.546 45.455 0.00 0.00 41.33 1.82
196 197 2.791383 TCGGCAACTTCACCAAATTG 57.209 45.000 0.00 0.00 0.00 2.32
197 198 2.028130 TCGGCAACTTCACCAAATTGT 58.972 42.857 0.00 0.00 0.00 2.71
198 199 3.215151 TCGGCAACTTCACCAAATTGTA 58.785 40.909 0.00 0.00 0.00 2.41
199 200 3.003897 TCGGCAACTTCACCAAATTGTAC 59.996 43.478 0.00 0.00 0.00 2.90
200 201 3.004315 CGGCAACTTCACCAAATTGTACT 59.996 43.478 0.00 0.00 0.00 2.73
201 202 4.214545 CGGCAACTTCACCAAATTGTACTA 59.785 41.667 0.00 0.00 0.00 1.82
202 203 5.106317 CGGCAACTTCACCAAATTGTACTAT 60.106 40.000 0.00 0.00 0.00 2.12
203 204 6.092748 GGCAACTTCACCAAATTGTACTATG 58.907 40.000 0.00 0.00 0.00 2.23
204 205 6.072175 GGCAACTTCACCAAATTGTACTATGA 60.072 38.462 0.00 0.00 0.00 2.15
205 206 7.023575 GCAACTTCACCAAATTGTACTATGAG 58.976 38.462 0.00 0.00 0.00 2.90
206 207 7.094805 GCAACTTCACCAAATTGTACTATGAGA 60.095 37.037 0.00 0.00 0.00 3.27
207 208 8.446273 CAACTTCACCAAATTGTACTATGAGAG 58.554 37.037 0.00 0.00 0.00 3.20
208 209 7.106239 ACTTCACCAAATTGTACTATGAGAGG 58.894 38.462 0.00 0.00 0.00 3.69
209 210 5.428253 TCACCAAATTGTACTATGAGAGGC 58.572 41.667 0.00 0.00 0.00 4.70
210 211 4.576463 CACCAAATTGTACTATGAGAGGCC 59.424 45.833 0.00 0.00 0.00 5.19
211 212 4.475016 ACCAAATTGTACTATGAGAGGCCT 59.525 41.667 3.86 3.86 0.00 5.19
212 213 5.059833 CCAAATTGTACTATGAGAGGCCTC 58.940 45.833 26.22 26.22 39.86 4.70
213 214 5.163258 CCAAATTGTACTATGAGAGGCCTCT 60.163 44.000 35.74 35.74 43.78 3.69
214 215 5.543507 AATTGTACTATGAGAGGCCTCTG 57.456 43.478 39.86 26.16 40.61 3.35
215 216 3.953542 TGTACTATGAGAGGCCTCTGA 57.046 47.619 39.86 32.54 40.61 3.27
216 217 4.461450 TGTACTATGAGAGGCCTCTGAT 57.539 45.455 39.86 36.18 40.61 2.90
217 218 4.809193 TGTACTATGAGAGGCCTCTGATT 58.191 43.478 39.86 23.88 40.61 2.57
218 219 4.830046 TGTACTATGAGAGGCCTCTGATTC 59.170 45.833 39.86 24.72 40.61 2.52
219 220 2.890311 ACTATGAGAGGCCTCTGATTCG 59.110 50.000 39.86 28.68 40.61 3.34
220 221 1.786937 ATGAGAGGCCTCTGATTCGT 58.213 50.000 39.86 22.82 40.61 3.85
221 222 0.820226 TGAGAGGCCTCTGATTCGTG 59.180 55.000 39.86 0.00 40.61 4.35
222 223 0.820871 GAGAGGCCTCTGATTCGTGT 59.179 55.000 39.86 13.00 40.61 4.49
223 224 2.025155 GAGAGGCCTCTGATTCGTGTA 58.975 52.381 39.86 0.00 40.61 2.90
224 225 2.028130 AGAGGCCTCTGATTCGTGTAG 58.972 52.381 34.74 0.00 38.75 2.74
225 226 1.751924 GAGGCCTCTGATTCGTGTAGT 59.248 52.381 26.25 0.00 0.00 2.73
226 227 2.166664 GAGGCCTCTGATTCGTGTAGTT 59.833 50.000 26.25 0.00 0.00 2.24
227 228 2.093973 AGGCCTCTGATTCGTGTAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
228 229 2.271800 GCCTCTGATTCGTGTAGTTGG 58.728 52.381 0.00 0.00 0.00 3.77
229 230 2.353803 GCCTCTGATTCGTGTAGTTGGT 60.354 50.000 0.00 0.00 0.00 3.67
230 231 3.254060 CCTCTGATTCGTGTAGTTGGTG 58.746 50.000 0.00 0.00 0.00 4.17
231 232 3.056821 CCTCTGATTCGTGTAGTTGGTGA 60.057 47.826 0.00 0.00 0.00 4.02
232 233 4.556233 CTCTGATTCGTGTAGTTGGTGAA 58.444 43.478 0.00 0.00 0.00 3.18
233 234 4.556233 TCTGATTCGTGTAGTTGGTGAAG 58.444 43.478 0.00 0.00 0.00 3.02
234 235 3.064207 TGATTCGTGTAGTTGGTGAAGC 58.936 45.455 0.00 0.00 0.00 3.86
235 236 2.605837 TTCGTGTAGTTGGTGAAGCA 57.394 45.000 0.00 0.00 0.00 3.91
236 237 2.831685 TCGTGTAGTTGGTGAAGCAT 57.168 45.000 0.00 0.00 0.00 3.79
237 238 2.412870 TCGTGTAGTTGGTGAAGCATG 58.587 47.619 0.00 0.00 0.00 4.06
238 239 1.464608 CGTGTAGTTGGTGAAGCATGG 59.535 52.381 0.00 0.00 0.00 3.66
239 240 1.200020 GTGTAGTTGGTGAAGCATGGC 59.800 52.381 0.00 0.00 0.00 4.40
240 241 0.447801 GTAGTTGGTGAAGCATGGCG 59.552 55.000 0.00 0.00 0.00 5.69
241 242 0.036164 TAGTTGGTGAAGCATGGCGT 59.964 50.000 0.00 0.00 0.00 5.68
242 243 0.823356 AGTTGGTGAAGCATGGCGTT 60.823 50.000 0.00 0.00 0.00 4.84
243 244 0.664166 GTTGGTGAAGCATGGCGTTG 60.664 55.000 0.00 0.00 0.00 4.10
244 245 0.821301 TTGGTGAAGCATGGCGTTGA 60.821 50.000 0.00 0.00 0.00 3.18
245 246 0.821301 TGGTGAAGCATGGCGTTGAA 60.821 50.000 0.00 0.00 0.00 2.69
246 247 0.109597 GGTGAAGCATGGCGTTGAAG 60.110 55.000 0.00 0.00 0.00 3.02
247 248 0.109597 GTGAAGCATGGCGTTGAAGG 60.110 55.000 0.00 0.00 0.00 3.46
248 249 0.250684 TGAAGCATGGCGTTGAAGGA 60.251 50.000 0.00 0.00 0.00 3.36
249 250 0.449388 GAAGCATGGCGTTGAAGGAG 59.551 55.000 0.00 0.00 0.00 3.69
250 251 0.036732 AAGCATGGCGTTGAAGGAGA 59.963 50.000 0.00 0.00 0.00 3.71
251 252 0.254178 AGCATGGCGTTGAAGGAGAT 59.746 50.000 0.00 0.00 0.00 2.75
252 253 0.659957 GCATGGCGTTGAAGGAGATC 59.340 55.000 0.00 0.00 0.00 2.75
253 254 1.303309 CATGGCGTTGAAGGAGATCC 58.697 55.000 0.00 0.00 0.00 3.36
254 255 0.179073 ATGGCGTTGAAGGAGATCCG 60.179 55.000 0.00 0.00 42.08 4.18
255 256 1.254975 TGGCGTTGAAGGAGATCCGA 61.255 55.000 0.00 0.00 42.08 4.55
256 257 0.108329 GGCGTTGAAGGAGATCCGAA 60.108 55.000 0.00 0.00 42.08 4.30
257 258 1.000145 GCGTTGAAGGAGATCCGAAC 59.000 55.000 0.00 0.00 42.08 3.95
258 259 1.671850 GCGTTGAAGGAGATCCGAACA 60.672 52.381 10.26 3.25 42.08 3.18
259 260 2.683968 CGTTGAAGGAGATCCGAACAA 58.316 47.619 10.26 7.75 42.08 2.83
260 261 2.412089 CGTTGAAGGAGATCCGAACAAC 59.588 50.000 19.07 19.07 42.08 3.32
261 262 2.742589 GTTGAAGGAGATCCGAACAACC 59.257 50.000 18.66 0.00 39.55 3.77
262 263 1.278127 TGAAGGAGATCCGAACAACCC 59.722 52.381 0.00 0.00 42.08 4.11
263 264 0.618981 AAGGAGATCCGAACAACCCC 59.381 55.000 0.00 0.00 42.08 4.95
264 265 0.252742 AGGAGATCCGAACAACCCCT 60.253 55.000 0.00 0.00 42.08 4.79
265 266 1.007963 AGGAGATCCGAACAACCCCTA 59.992 52.381 0.00 0.00 42.08 3.53
266 267 1.835531 GGAGATCCGAACAACCCCTAA 59.164 52.381 0.00 0.00 0.00 2.69
267 268 2.237893 GGAGATCCGAACAACCCCTAAA 59.762 50.000 0.00 0.00 0.00 1.85
268 269 3.268330 GAGATCCGAACAACCCCTAAAC 58.732 50.000 0.00 0.00 0.00 2.01
269 270 2.910977 AGATCCGAACAACCCCTAAACT 59.089 45.455 0.00 0.00 0.00 2.66
270 271 4.098894 AGATCCGAACAACCCCTAAACTA 58.901 43.478 0.00 0.00 0.00 2.24
271 272 4.533311 AGATCCGAACAACCCCTAAACTAA 59.467 41.667 0.00 0.00 0.00 2.24
272 273 4.703379 TCCGAACAACCCCTAAACTAAA 57.297 40.909 0.00 0.00 0.00 1.85
273 274 5.046288 TCCGAACAACCCCTAAACTAAAA 57.954 39.130 0.00 0.00 0.00 1.52
274 275 5.633117 TCCGAACAACCCCTAAACTAAAAT 58.367 37.500 0.00 0.00 0.00 1.82
275 276 6.069994 TCCGAACAACCCCTAAACTAAAATT 58.930 36.000 0.00 0.00 0.00 1.82
276 277 6.016108 TCCGAACAACCCCTAAACTAAAATTG 60.016 38.462 0.00 0.00 0.00 2.32
277 278 6.239092 CCGAACAACCCCTAAACTAAAATTGT 60.239 38.462 0.00 0.00 0.00 2.71
278 279 6.639279 CGAACAACCCCTAAACTAAAATTGTG 59.361 38.462 0.00 0.00 0.00 3.33
279 280 5.849510 ACAACCCCTAAACTAAAATTGTGC 58.150 37.500 0.00 0.00 0.00 4.57
280 281 5.600898 ACAACCCCTAAACTAAAATTGTGCT 59.399 36.000 0.00 0.00 0.00 4.40
281 282 5.977489 ACCCCTAAACTAAAATTGTGCTC 57.023 39.130 0.00 0.00 0.00 4.26
282 283 5.641155 ACCCCTAAACTAAAATTGTGCTCT 58.359 37.500 0.00 0.00 0.00 4.09
283 284 6.075315 ACCCCTAAACTAAAATTGTGCTCTT 58.925 36.000 0.00 0.00 0.00 2.85
284 285 6.015434 ACCCCTAAACTAAAATTGTGCTCTTG 60.015 38.462 0.00 0.00 0.00 3.02
285 286 6.389906 CCCTAAACTAAAATTGTGCTCTTGG 58.610 40.000 0.00 0.00 0.00 3.61
286 287 6.208599 CCCTAAACTAAAATTGTGCTCTTGGA 59.791 38.462 0.00 0.00 0.00 3.53
287 288 7.084486 CCTAAACTAAAATTGTGCTCTTGGAC 58.916 38.462 0.00 0.00 34.96 4.02
288 289 6.463995 AAACTAAAATTGTGCTCTTGGACA 57.536 33.333 0.00 0.00 42.73 4.02
289 290 6.655078 AACTAAAATTGTGCTCTTGGACAT 57.345 33.333 0.00 0.00 43.81 3.06
290 291 6.259550 ACTAAAATTGTGCTCTTGGACATC 57.740 37.500 0.00 0.00 43.81 3.06
291 292 5.769662 ACTAAAATTGTGCTCTTGGACATCA 59.230 36.000 0.00 0.00 43.81 3.07
292 293 5.534207 AAAATTGTGCTCTTGGACATCAA 57.466 34.783 0.00 0.00 43.81 2.57
293 294 4.510038 AATTGTGCTCTTGGACATCAAC 57.490 40.909 0.00 0.00 43.81 3.18
294 295 2.636647 TGTGCTCTTGGACATCAACA 57.363 45.000 0.00 0.00 39.59 3.33
295 296 3.144657 TGTGCTCTTGGACATCAACAT 57.855 42.857 0.00 0.00 39.59 2.71
296 297 4.284829 TGTGCTCTTGGACATCAACATA 57.715 40.909 0.00 0.00 39.59 2.29
297 298 4.847198 TGTGCTCTTGGACATCAACATAT 58.153 39.130 0.00 0.00 39.59 1.78
298 299 4.877823 TGTGCTCTTGGACATCAACATATC 59.122 41.667 0.00 0.00 39.59 1.63
299 300 4.877823 GTGCTCTTGGACATCAACATATCA 59.122 41.667 0.00 0.00 34.50 2.15
300 301 5.355071 GTGCTCTTGGACATCAACATATCAA 59.645 40.000 0.00 0.00 34.50 2.57
301 302 5.945191 TGCTCTTGGACATCAACATATCAAA 59.055 36.000 0.00 0.00 0.00 2.69
302 303 6.127925 TGCTCTTGGACATCAACATATCAAAC 60.128 38.462 0.00 0.00 0.00 2.93
303 304 6.094603 GCTCTTGGACATCAACATATCAAACT 59.905 38.462 0.00 0.00 0.00 2.66
304 305 7.381766 TCTTGGACATCAACATATCAAACTG 57.618 36.000 0.00 0.00 0.00 3.16
305 306 7.167535 TCTTGGACATCAACATATCAAACTGA 58.832 34.615 0.00 0.00 0.00 3.41
306 307 7.665145 TCTTGGACATCAACATATCAAACTGAA 59.335 33.333 0.00 0.00 0.00 3.02
307 308 7.757941 TGGACATCAACATATCAAACTGAAA 57.242 32.000 0.00 0.00 0.00 2.69
308 309 8.175925 TGGACATCAACATATCAAACTGAAAA 57.824 30.769 0.00 0.00 0.00 2.29
309 310 8.637099 TGGACATCAACATATCAAACTGAAAAA 58.363 29.630 0.00 0.00 0.00 1.94
326 327 2.927553 AAAAGACTGATTGATGCGCC 57.072 45.000 4.18 0.00 0.00 6.53
327 328 2.119801 AAAGACTGATTGATGCGCCT 57.880 45.000 4.18 0.00 0.00 5.52
328 329 2.988010 AAGACTGATTGATGCGCCTA 57.012 45.000 4.18 0.00 0.00 3.93
329 330 2.988010 AGACTGATTGATGCGCCTAA 57.012 45.000 4.18 0.00 0.00 2.69
330 331 2.831333 AGACTGATTGATGCGCCTAAG 58.169 47.619 4.18 0.00 0.00 2.18
331 332 1.262683 GACTGATTGATGCGCCTAAGC 59.737 52.381 4.18 0.24 37.71 3.09
339 340 2.470156 TGCGCCTAAGCAGTCAATG 58.530 52.632 4.18 0.00 42.92 2.82
340 341 1.026182 TGCGCCTAAGCAGTCAATGG 61.026 55.000 4.18 0.00 42.92 3.16
341 342 1.026718 GCGCCTAAGCAGTCAATGGT 61.027 55.000 0.00 0.00 42.89 3.55
374 375 9.614792 AAATTTTGTAGGTCTACCTCATGATAC 57.385 33.333 4.57 0.00 44.77 2.24
375 376 7.973048 TTTTGTAGGTCTACCTCATGATACT 57.027 36.000 4.57 0.00 44.77 2.12
376 377 9.656323 ATTTTGTAGGTCTACCTCATGATACTA 57.344 33.333 4.57 0.00 44.77 1.82
377 378 9.656323 TTTTGTAGGTCTACCTCATGATACTAT 57.344 33.333 4.57 0.00 44.77 2.12
378 379 8.865420 TTGTAGGTCTACCTCATGATACTATC 57.135 38.462 4.57 0.00 44.77 2.08
379 380 7.403671 TGTAGGTCTACCTCATGATACTATCC 58.596 42.308 4.57 0.00 44.77 2.59
380 381 6.470456 AGGTCTACCTCATGATACTATCCA 57.530 41.667 0.00 0.00 44.77 3.41
381 382 7.050493 AGGTCTACCTCATGATACTATCCAT 57.950 40.000 0.00 0.00 44.77 3.41
382 383 6.894654 AGGTCTACCTCATGATACTATCCATG 59.105 42.308 0.00 0.00 44.77 3.66
383 384 6.406400 GGTCTACCTCATGATACTATCCATGC 60.406 46.154 0.00 0.00 39.82 4.06
384 385 6.153510 GTCTACCTCATGATACTATCCATGCA 59.846 42.308 0.00 0.00 39.82 3.96
385 386 6.899631 TCTACCTCATGATACTATCCATGCAT 59.100 38.462 0.00 0.00 39.82 3.96
386 387 6.384342 ACCTCATGATACTATCCATGCATT 57.616 37.500 0.00 0.00 39.82 3.56
387 388 6.413052 ACCTCATGATACTATCCATGCATTC 58.587 40.000 0.00 0.00 39.82 2.67
388 389 5.821470 CCTCATGATACTATCCATGCATTCC 59.179 44.000 0.00 0.00 39.82 3.01
389 390 6.377245 TCATGATACTATCCATGCATTCCA 57.623 37.500 0.00 0.00 39.82 3.53
390 391 6.965607 TCATGATACTATCCATGCATTCCAT 58.034 36.000 0.00 0.00 39.82 3.41
391 392 7.052248 TCATGATACTATCCATGCATTCCATC 58.948 38.462 0.00 0.00 39.82 3.51
392 393 6.631763 TGATACTATCCATGCATTCCATCT 57.368 37.500 0.00 0.00 29.71 2.90
393 394 7.024345 TGATACTATCCATGCATTCCATCTT 57.976 36.000 0.00 0.00 29.71 2.40
394 395 7.464273 TGATACTATCCATGCATTCCATCTTT 58.536 34.615 0.00 0.00 29.71 2.52
395 396 8.605065 TGATACTATCCATGCATTCCATCTTTA 58.395 33.333 0.00 0.00 29.71 1.85
396 397 9.453572 GATACTATCCATGCATTCCATCTTTAA 57.546 33.333 0.00 0.00 29.71 1.52
397 398 7.756395 ACTATCCATGCATTCCATCTTTAAG 57.244 36.000 0.00 0.00 29.71 1.85
398 399 7.520798 ACTATCCATGCATTCCATCTTTAAGA 58.479 34.615 0.00 0.00 29.71 2.10
399 400 8.000709 ACTATCCATGCATTCCATCTTTAAGAA 58.999 33.333 0.00 0.00 29.71 2.52
400 401 6.704289 TCCATGCATTCCATCTTTAAGAAG 57.296 37.500 0.00 0.00 29.71 2.85
401 402 6.189859 TCCATGCATTCCATCTTTAAGAAGT 58.810 36.000 0.00 0.00 34.41 3.01
402 403 6.319658 TCCATGCATTCCATCTTTAAGAAGTC 59.680 38.462 0.00 0.00 34.41 3.01
403 404 6.095860 CCATGCATTCCATCTTTAAGAAGTCA 59.904 38.462 0.00 0.00 34.41 3.41
404 405 7.201884 CCATGCATTCCATCTTTAAGAAGTCAT 60.202 37.037 0.00 0.00 34.41 3.06
405 406 7.707624 TGCATTCCATCTTTAAGAAGTCATT 57.292 32.000 0.00 0.00 34.41 2.57
406 407 7.765307 TGCATTCCATCTTTAAGAAGTCATTC 58.235 34.615 0.00 0.00 34.41 2.67
407 408 7.394077 TGCATTCCATCTTTAAGAAGTCATTCA 59.606 33.333 0.00 0.00 37.94 2.57
408 409 8.246180 GCATTCCATCTTTAAGAAGTCATTCAA 58.754 33.333 0.00 0.00 37.94 2.69
409 410 9.784680 CATTCCATCTTTAAGAAGTCATTCAAG 57.215 33.333 0.00 0.00 37.94 3.02
410 411 8.924511 TTCCATCTTTAAGAAGTCATTCAAGT 57.075 30.769 0.00 0.00 37.94 3.16
433 434 9.755064 AAGTAACTTAATCATTTGTTCGATTCG 57.245 29.630 0.00 0.00 33.90 3.34
434 435 8.932791 AGTAACTTAATCATTTGTTCGATTCGT 58.067 29.630 5.89 0.00 33.90 3.85
435 436 9.537848 GTAACTTAATCATTTGTTCGATTCGTT 57.462 29.630 5.89 0.00 33.90 3.85
438 439 9.755064 ACTTAATCATTTGTTCGATTCGTTTAG 57.245 29.630 5.89 0.00 33.90 1.85
439 440 8.595781 TTAATCATTTGTTCGATTCGTTTAGC 57.404 30.769 5.89 0.00 33.90 3.09
440 441 5.856126 TCATTTGTTCGATTCGTTTAGCT 57.144 34.783 5.89 0.00 0.00 3.32
441 442 5.617609 TCATTTGTTCGATTCGTTTAGCTG 58.382 37.500 5.89 0.00 0.00 4.24
442 443 5.178623 TCATTTGTTCGATTCGTTTAGCTGT 59.821 36.000 5.89 0.00 0.00 4.40
443 444 6.366604 TCATTTGTTCGATTCGTTTAGCTGTA 59.633 34.615 5.89 0.00 0.00 2.74
444 445 6.715344 TTTGTTCGATTCGTTTAGCTGTAT 57.285 33.333 5.89 0.00 0.00 2.29
445 446 6.715344 TTGTTCGATTCGTTTAGCTGTATT 57.285 33.333 5.89 0.00 0.00 1.89
446 447 6.089920 TGTTCGATTCGTTTAGCTGTATTG 57.910 37.500 5.89 0.00 0.00 1.90
447 448 4.772046 TCGATTCGTTTAGCTGTATTGC 57.228 40.909 5.89 0.00 0.00 3.56
448 449 3.554324 TCGATTCGTTTAGCTGTATTGCC 59.446 43.478 5.89 0.00 0.00 4.52
449 450 3.308595 CGATTCGTTTAGCTGTATTGCCA 59.691 43.478 0.00 0.00 0.00 4.92
450 451 4.588278 GATTCGTTTAGCTGTATTGCCAC 58.412 43.478 0.00 0.00 0.00 5.01
451 452 2.352388 TCGTTTAGCTGTATTGCCACC 58.648 47.619 0.00 0.00 0.00 4.61
452 453 1.400494 CGTTTAGCTGTATTGCCACCC 59.600 52.381 0.00 0.00 0.00 4.61
453 454 1.400494 GTTTAGCTGTATTGCCACCCG 59.600 52.381 0.00 0.00 0.00 5.28
454 455 0.616371 TTAGCTGTATTGCCACCCGT 59.384 50.000 0.00 0.00 0.00 5.28
455 456 1.487300 TAGCTGTATTGCCACCCGTA 58.513 50.000 0.00 0.00 0.00 4.02
456 457 0.178068 AGCTGTATTGCCACCCGTAG 59.822 55.000 0.00 0.00 0.00 3.51
457 458 1.436983 GCTGTATTGCCACCCGTAGC 61.437 60.000 0.00 0.00 0.00 3.58
458 459 0.107897 CTGTATTGCCACCCGTAGCA 60.108 55.000 0.00 0.00 37.18 3.49
470 471 3.124921 GTAGCAACGCACGGGCAT 61.125 61.111 11.77 0.00 41.24 4.40
471 472 1.812093 GTAGCAACGCACGGGCATA 60.812 57.895 11.77 0.00 41.24 3.14
472 473 1.145156 TAGCAACGCACGGGCATAT 59.855 52.632 11.77 0.00 41.24 1.78
518 519 1.516161 AACCTAACGCTCCGGTTTTC 58.484 50.000 0.00 0.00 37.76 2.29
623 624 1.677820 CCGTCAATACCAACCCTGACC 60.678 57.143 0.00 0.00 35.77 4.02
674 675 0.498685 AACCTTCCTCCCCTCTTCCT 59.501 55.000 0.00 0.00 0.00 3.36
1063 1074 4.933064 GATCGACCGGCGCCTCTG 62.933 72.222 26.68 15.34 40.61 3.35
1069 1080 2.815647 CCGGCGCCTCTGACTTTC 60.816 66.667 26.68 0.00 0.00 2.62
1083 1095 4.333372 TCTGACTTTCGGTGGTTTGTTAAC 59.667 41.667 0.00 0.00 0.00 2.01
1259 1272 2.662527 GGTTCCGTTCGTTCCGCA 60.663 61.111 0.00 0.00 0.00 5.69
1261 1274 1.418755 GTTCCGTTCGTTCCGCATC 59.581 57.895 0.00 0.00 0.00 3.91
1280 1295 4.568956 CATCCCCAGTTGATTTTGGTTTC 58.431 43.478 0.00 0.00 32.40 2.78
1292 1307 2.119484 TTGGTTTCCTCCGCACCGAT 62.119 55.000 0.00 0.00 32.71 4.18
1482 1498 8.736097 AGGTCTTTATTGGGGTTAATTTCTTT 57.264 30.769 0.00 0.00 0.00 2.52
1523 1539 1.133025 GGTTTGTGGATGCGATCTTGG 59.867 52.381 0.00 0.00 0.00 3.61
1584 1600 5.625150 GGTCATAATTGGCTTGAGGTCTAT 58.375 41.667 0.00 0.00 0.00 1.98
1658 1674 8.680903 CATGCCTAATTAGTTCTGATCTTTGTT 58.319 33.333 11.50 0.00 0.00 2.83
1731 1750 1.276421 GTACGGATCATGAGGATGGGG 59.724 57.143 0.09 0.00 36.00 4.96
1814 1833 8.989653 AATGAAGTACTCTGCTAGTTTTAGTC 57.010 34.615 0.00 0.00 39.80 2.59
1923 1942 2.689471 ACAAGTGCTTCTGTGCAAATGA 59.311 40.909 0.00 0.00 45.12 2.57
2290 2315 6.379988 GTGGGGAAGGTAATGTGTTGAATTAT 59.620 38.462 0.00 0.00 0.00 1.28
2639 2717 2.262915 GCTCTACTGCCTGCACGT 59.737 61.111 0.00 0.00 0.00 4.49
2698 2776 0.847373 TTAGGTTCTTGGGGCACACA 59.153 50.000 0.00 0.00 0.00 3.72
3163 3321 6.801539 TCTAGTGTGGCTAAAACAATTCAG 57.198 37.500 0.00 0.00 0.00 3.02
3305 3463 2.982488 TGGGGGCAATAACACCAAAATT 59.018 40.909 0.00 0.00 0.00 1.82
3371 3529 3.496884 CGGCTAATCGGCAGCTAAATTTA 59.503 43.478 0.00 0.00 39.09 1.40
4000 4183 8.932945 CAGCATTCTGTAGAGTATAACAAGAA 57.067 34.615 0.00 0.00 35.61 2.52
4105 4288 3.188773 GGCTGTTAACGGGCAAAAC 57.811 52.632 30.30 7.41 45.98 2.43
4115 4298 6.766467 TGTTAACGGGCAAAACCAAAATAATT 59.234 30.769 0.26 0.00 42.05 1.40
4162 4345 5.979517 GCATGCTGAAACAAGAAACTTACTT 59.020 36.000 11.37 0.00 0.00 2.24
4188 4371 8.918116 TGTGACATGCTAGACTATTAGAGATTT 58.082 33.333 0.00 0.00 0.00 2.17
4205 4388 5.658634 AGAGATTTGCCCTTTTATTTCCTCC 59.341 40.000 0.00 0.00 0.00 4.30
4601 4933 3.544684 GAATGTAGGATGTGACATGCCA 58.455 45.455 13.61 6.00 36.42 4.92
4667 4999 0.779997 AGGGGAAGAACATGCAGGTT 59.220 50.000 17.91 17.91 0.00 3.50
4702 5047 9.629649 ATTCCCTGATCCTGGTTTAATAGTATA 57.370 33.333 0.00 0.00 0.00 1.47
4747 5093 5.486775 AGAAAGAGGTCATTCTGATCCTGAA 59.513 40.000 0.00 0.00 33.27 3.02
4752 5098 6.385176 AGAGGTCATTCTGATCCTGAATAACA 59.615 38.462 11.54 0.00 32.31 2.41
4820 5166 9.474313 AAGATGACAGCCCTTATTTGTAATTAA 57.526 29.630 0.00 0.00 0.00 1.40
4823 5169 8.410673 TGACAGCCCTTATTTGTAATTAACAA 57.589 30.769 0.00 0.00 46.41 2.83
5016 5362 1.268066 GTCCCCGAAGAGGAAGAAGT 58.732 55.000 0.00 0.00 34.92 3.01
5098 5456 1.839994 GAAGTGATGAGGGTGGATCCA 59.160 52.381 11.44 11.44 38.11 3.41
5121 5479 0.108138 GGTAGGCGCACTCAGTTCAT 60.108 55.000 10.83 0.00 0.00 2.57
5465 5835 8.255905 GGTACCGTATTCAAGTTAGGCATATAT 58.744 37.037 0.00 0.00 0.00 0.86
5505 5875 7.413657 GCCTAAAGTGTATTTTGCATCTCGTAA 60.414 37.037 0.00 0.00 0.00 3.18
5511 5881 2.472695 TTTGCATCTCGTAAGCCAGT 57.527 45.000 0.00 0.00 37.18 4.00
5574 5944 4.749099 GTGCTGATGAGTGGATAATCAGTC 59.251 45.833 12.14 6.58 45.92 3.51
5587 5957 5.406780 GGATAATCAGTCGCTTGTTCCATAG 59.593 44.000 0.00 0.00 0.00 2.23
5588 5958 4.471904 AATCAGTCGCTTGTTCCATAGA 57.528 40.909 0.00 0.00 0.00 1.98
5589 5959 3.510388 TCAGTCGCTTGTTCCATAGAG 57.490 47.619 0.00 0.00 0.00 2.43
5590 5960 1.929836 CAGTCGCTTGTTCCATAGAGC 59.070 52.381 0.00 0.00 0.00 4.09
5591 5961 1.827969 AGTCGCTTGTTCCATAGAGCT 59.172 47.619 0.00 0.00 33.09 4.09
5592 5962 3.024547 AGTCGCTTGTTCCATAGAGCTA 58.975 45.455 0.00 0.00 33.09 3.32
5593 5963 3.117046 GTCGCTTGTTCCATAGAGCTAC 58.883 50.000 0.00 0.00 33.09 3.58
5594 5964 2.100916 TCGCTTGTTCCATAGAGCTACC 59.899 50.000 0.00 0.00 33.09 3.18
5595 5965 2.101582 CGCTTGTTCCATAGAGCTACCT 59.898 50.000 0.00 0.00 33.09 3.08
5596 5966 3.430929 CGCTTGTTCCATAGAGCTACCTT 60.431 47.826 0.00 0.00 33.09 3.50
5631 6011 1.172812 AGCCGCAAGTTTTCTGGGAC 61.173 55.000 0.00 0.00 0.00 4.46
5632 6012 1.452145 GCCGCAAGTTTTCTGGGACA 61.452 55.000 0.00 0.00 0.00 4.02
5633 6013 1.028905 CCGCAAGTTTTCTGGGACAA 58.971 50.000 0.00 0.00 38.70 3.18
5634 6014 1.613437 CCGCAAGTTTTCTGGGACAAT 59.387 47.619 0.00 0.00 38.70 2.71
5635 6015 2.035832 CCGCAAGTTTTCTGGGACAATT 59.964 45.455 0.00 0.00 38.70 2.32
5636 6016 3.052036 CGCAAGTTTTCTGGGACAATTG 58.948 45.455 3.24 3.24 38.70 2.32
5637 6017 3.392882 GCAAGTTTTCTGGGACAATTGG 58.607 45.455 10.83 0.00 38.70 3.16
5638 6018 3.069443 GCAAGTTTTCTGGGACAATTGGA 59.931 43.478 10.83 0.00 38.70 3.53
5639 6019 4.262592 GCAAGTTTTCTGGGACAATTGGAT 60.263 41.667 10.83 0.00 38.70 3.41
5640 6020 5.473039 CAAGTTTTCTGGGACAATTGGATC 58.527 41.667 10.83 0.00 38.70 3.36
5641 6021 4.089361 AGTTTTCTGGGACAATTGGATCC 58.911 43.478 10.83 4.20 38.70 3.36
5642 6022 3.824001 TTTCTGGGACAATTGGATCCA 57.176 42.857 11.44 11.44 38.70 3.41
5643 6023 4.335735 TTTCTGGGACAATTGGATCCAT 57.664 40.909 17.06 0.00 38.70 3.41
5644 6024 3.301794 TCTGGGACAATTGGATCCATG 57.698 47.619 17.06 14.65 38.70 3.66
5645 6025 2.091720 TCTGGGACAATTGGATCCATGG 60.092 50.000 17.06 4.97 38.70 3.66
5646 6026 1.063038 TGGGACAATTGGATCCATGGG 60.063 52.381 17.06 10.26 36.65 4.00
5647 6027 1.062962 GGGACAATTGGATCCATGGGT 60.063 52.381 17.06 13.58 36.65 4.51
5648 6028 2.626683 GGGACAATTGGATCCATGGGTT 60.627 50.000 17.06 5.85 36.65 4.11
5649 6029 3.373658 GGGACAATTGGATCCATGGGTTA 60.374 47.826 17.06 0.00 36.65 2.85
5650 6030 3.891366 GGACAATTGGATCCATGGGTTAG 59.109 47.826 17.06 4.42 34.87 2.34
5651 6031 4.386312 GGACAATTGGATCCATGGGTTAGA 60.386 45.833 17.06 0.00 34.87 2.10
5652 6032 4.796606 ACAATTGGATCCATGGGTTAGAG 58.203 43.478 17.06 0.00 0.00 2.43
5653 6033 4.230502 ACAATTGGATCCATGGGTTAGAGT 59.769 41.667 17.06 0.00 0.00 3.24
5654 6034 5.203528 CAATTGGATCCATGGGTTAGAGTT 58.796 41.667 17.06 0.00 0.00 3.01
5655 6035 6.069088 ACAATTGGATCCATGGGTTAGAGTTA 60.069 38.462 17.06 0.00 0.00 2.24
5656 6036 5.630415 TTGGATCCATGGGTTAGAGTTAG 57.370 43.478 17.06 0.00 0.00 2.34
5657 6037 4.631234 TGGATCCATGGGTTAGAGTTAGT 58.369 43.478 11.44 0.00 0.00 2.24
5658 6038 5.036916 TGGATCCATGGGTTAGAGTTAGTT 58.963 41.667 11.44 0.00 0.00 2.24
5659 6039 5.130477 TGGATCCATGGGTTAGAGTTAGTTC 59.870 44.000 11.44 0.00 0.00 3.01
5660 6040 4.730949 TCCATGGGTTAGAGTTAGTTCG 57.269 45.455 13.02 0.00 0.00 3.95
5661 6041 3.449737 TCCATGGGTTAGAGTTAGTTCGG 59.550 47.826 13.02 0.00 0.00 4.30
5662 6042 3.431766 CCATGGGTTAGAGTTAGTTCGGG 60.432 52.174 2.85 0.00 0.00 5.14
5663 6043 2.893424 TGGGTTAGAGTTAGTTCGGGT 58.107 47.619 0.00 0.00 0.00 5.28
5664 6044 2.827921 TGGGTTAGAGTTAGTTCGGGTC 59.172 50.000 0.00 0.00 0.00 4.46
5665 6045 2.827921 GGGTTAGAGTTAGTTCGGGTCA 59.172 50.000 0.00 0.00 0.00 4.02
5666 6046 3.119209 GGGTTAGAGTTAGTTCGGGTCAG 60.119 52.174 0.00 0.00 0.00 3.51
5667 6047 3.509184 GGTTAGAGTTAGTTCGGGTCAGT 59.491 47.826 0.00 0.00 0.00 3.41
5668 6048 4.021632 GGTTAGAGTTAGTTCGGGTCAGTT 60.022 45.833 0.00 0.00 0.00 3.16
5669 6049 5.510349 GGTTAGAGTTAGTTCGGGTCAGTTT 60.510 44.000 0.00 0.00 0.00 2.66
5670 6050 3.991367 AGAGTTAGTTCGGGTCAGTTTG 58.009 45.455 0.00 0.00 0.00 2.93
5671 6051 3.064931 GAGTTAGTTCGGGTCAGTTTGG 58.935 50.000 0.00 0.00 0.00 3.28
5672 6052 2.701951 AGTTAGTTCGGGTCAGTTTGGA 59.298 45.455 0.00 0.00 0.00 3.53
5673 6053 2.804527 GTTAGTTCGGGTCAGTTTGGAC 59.195 50.000 0.00 0.00 37.06 4.02
5674 6054 1.129058 AGTTCGGGTCAGTTTGGACT 58.871 50.000 0.00 0.00 37.91 3.85
5675 6055 1.070289 AGTTCGGGTCAGTTTGGACTC 59.930 52.381 0.00 0.00 37.91 3.36
5676 6056 1.124780 TTCGGGTCAGTTTGGACTCA 58.875 50.000 0.00 0.00 38.20 3.41
5677 6057 1.124780 TCGGGTCAGTTTGGACTCAA 58.875 50.000 0.00 0.00 38.20 3.02
5678 6058 1.202604 TCGGGTCAGTTTGGACTCAAC 60.203 52.381 0.00 0.00 38.20 3.18
5679 6059 1.202651 CGGGTCAGTTTGGACTCAACT 60.203 52.381 0.00 0.00 38.20 3.16
5680 6060 2.036733 CGGGTCAGTTTGGACTCAACTA 59.963 50.000 0.00 0.00 38.20 2.24
5681 6061 3.493699 CGGGTCAGTTTGGACTCAACTAA 60.494 47.826 0.00 0.00 38.20 2.24
5682 6062 4.457466 GGGTCAGTTTGGACTCAACTAAA 58.543 43.478 0.00 0.00 38.20 1.85
5683 6063 4.275196 GGGTCAGTTTGGACTCAACTAAAC 59.725 45.833 0.00 0.00 38.20 2.01
5684 6064 4.275196 GGTCAGTTTGGACTCAACTAAACC 59.725 45.833 0.00 0.00 40.41 3.27
5685 6065 4.275196 GTCAGTTTGGACTCAACTAAACCC 59.725 45.833 0.00 0.00 40.41 4.11
5686 6066 4.080243 TCAGTTTGGACTCAACTAAACCCA 60.080 41.667 0.00 0.00 40.41 4.51
6232 6648 3.751049 CTAGCCTCCCCCACCGCTA 62.751 68.421 0.00 0.00 32.76 4.26
6233 6649 3.751049 TAGCCTCCCCCACCGCTAG 62.751 68.421 0.00 0.00 32.76 3.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.665185 ACAAGTCCGCCACGAAGC 60.665 61.111 0.00 0.00 0.00 3.86
3 4 0.670546 ATCACAAGTCCGCCACGAAG 60.671 55.000 0.00 0.00 0.00 3.79
4 5 0.604073 TATCACAAGTCCGCCACGAA 59.396 50.000 0.00 0.00 0.00 3.85
5 6 0.604073 TTATCACAAGTCCGCCACGA 59.396 50.000 0.00 0.00 0.00 4.35
6 7 0.999406 CTTATCACAAGTCCGCCACG 59.001 55.000 0.00 0.00 0.00 4.94
7 8 1.066430 TCCTTATCACAAGTCCGCCAC 60.066 52.381 0.00 0.00 0.00 5.01
8 9 1.271856 TCCTTATCACAAGTCCGCCA 58.728 50.000 0.00 0.00 0.00 5.69
9 10 2.396590 TTCCTTATCACAAGTCCGCC 57.603 50.000 0.00 0.00 0.00 6.13
10 11 3.071479 TGTTTCCTTATCACAAGTCCGC 58.929 45.455 0.00 0.00 0.00 5.54
11 12 5.163754 GGATTGTTTCCTTATCACAAGTCCG 60.164 44.000 0.00 0.00 41.78 4.79
12 13 5.710099 TGGATTGTTTCCTTATCACAAGTCC 59.290 40.000 0.00 0.00 45.68 3.85
13 14 6.817765 TGGATTGTTTCCTTATCACAAGTC 57.182 37.500 0.00 0.00 45.68 3.01
14 15 6.293955 CGTTGGATTGTTTCCTTATCACAAGT 60.294 38.462 0.00 0.00 45.68 3.16
15 16 6.086222 CGTTGGATTGTTTCCTTATCACAAG 58.914 40.000 0.00 0.00 45.68 3.16
16 17 5.533154 ACGTTGGATTGTTTCCTTATCACAA 59.467 36.000 0.00 0.00 45.68 3.33
17 18 5.067273 ACGTTGGATTGTTTCCTTATCACA 58.933 37.500 0.00 0.00 45.68 3.58
18 19 5.622770 ACGTTGGATTGTTTCCTTATCAC 57.377 39.130 0.00 0.00 45.68 3.06
19 20 7.148154 CCATTACGTTGGATTGTTTCCTTATCA 60.148 37.037 0.00 0.00 45.68 2.15
20 21 7.066525 TCCATTACGTTGGATTGTTTCCTTATC 59.933 37.037 4.82 0.00 45.68 1.75
21 22 6.887545 TCCATTACGTTGGATTGTTTCCTTAT 59.112 34.615 4.82 0.00 45.68 1.73
22 23 6.239396 TCCATTACGTTGGATTGTTTCCTTA 58.761 36.000 4.82 0.00 45.68 2.69
23 24 5.074115 TCCATTACGTTGGATTGTTTCCTT 58.926 37.500 4.82 0.00 45.68 3.36
24 25 4.658063 TCCATTACGTTGGATTGTTTCCT 58.342 39.130 4.82 0.00 45.68 3.36
34 35 3.245284 CGAAGCACTATCCATTACGTTGG 59.755 47.826 0.00 0.00 38.18 3.77
35 36 4.026804 GTCGAAGCACTATCCATTACGTTG 60.027 45.833 0.00 0.00 0.00 4.10
36 37 4.110482 GTCGAAGCACTATCCATTACGTT 58.890 43.478 0.00 0.00 0.00 3.99
37 38 3.703420 GTCGAAGCACTATCCATTACGT 58.297 45.455 0.00 0.00 0.00 3.57
38 39 2.719556 CGTCGAAGCACTATCCATTACG 59.280 50.000 0.00 0.00 0.00 3.18
39 40 3.050619 CCGTCGAAGCACTATCCATTAC 58.949 50.000 0.00 0.00 0.00 1.89
40 41 2.035449 CCCGTCGAAGCACTATCCATTA 59.965 50.000 0.00 0.00 0.00 1.90
41 42 1.202533 CCCGTCGAAGCACTATCCATT 60.203 52.381 0.00 0.00 0.00 3.16
42 43 0.389391 CCCGTCGAAGCACTATCCAT 59.611 55.000 0.00 0.00 0.00 3.41
43 44 1.672854 CCCCGTCGAAGCACTATCCA 61.673 60.000 0.00 0.00 0.00 3.41
44 45 1.067582 CCCCGTCGAAGCACTATCC 59.932 63.158 0.00 0.00 0.00 2.59
45 46 0.175073 AACCCCGTCGAAGCACTATC 59.825 55.000 0.00 0.00 0.00 2.08
46 47 0.175073 GAACCCCGTCGAAGCACTAT 59.825 55.000 0.00 0.00 0.00 2.12
47 48 1.180456 TGAACCCCGTCGAAGCACTA 61.180 55.000 0.00 0.00 0.00 2.74
48 49 1.827399 ATGAACCCCGTCGAAGCACT 61.827 55.000 0.00 0.00 0.00 4.40
49 50 1.375523 ATGAACCCCGTCGAAGCAC 60.376 57.895 0.00 0.00 0.00 4.40
50 51 1.375396 CATGAACCCCGTCGAAGCA 60.375 57.895 0.00 0.00 0.00 3.91
51 52 0.672401 TTCATGAACCCCGTCGAAGC 60.672 55.000 3.38 0.00 0.00 3.86
52 53 1.732259 CTTTCATGAACCCCGTCGAAG 59.268 52.381 7.89 0.00 0.00 3.79
53 54 1.071071 ACTTTCATGAACCCCGTCGAA 59.929 47.619 7.89 0.00 0.00 3.71
54 55 0.682852 ACTTTCATGAACCCCGTCGA 59.317 50.000 7.89 0.00 0.00 4.20
55 56 1.463444 GAACTTTCATGAACCCCGTCG 59.537 52.381 7.89 0.00 0.00 5.12
56 57 2.500229 TGAACTTTCATGAACCCCGTC 58.500 47.619 7.89 2.60 31.01 4.79
57 58 2.649531 TGAACTTTCATGAACCCCGT 57.350 45.000 7.89 0.47 31.01 5.28
67 68 8.514594 GTGTATCTCCATTTTCATGAACTTTCA 58.485 33.333 7.89 0.00 42.14 2.69
68 69 8.514594 TGTGTATCTCCATTTTCATGAACTTTC 58.485 33.333 7.89 0.00 31.07 2.62
69 70 8.408043 TGTGTATCTCCATTTTCATGAACTTT 57.592 30.769 7.89 0.00 31.07 2.66
70 71 8.408043 TTGTGTATCTCCATTTTCATGAACTT 57.592 30.769 7.89 0.00 31.07 2.66
71 72 7.667219 ACTTGTGTATCTCCATTTTCATGAACT 59.333 33.333 7.89 0.00 31.07 3.01
72 73 7.820648 ACTTGTGTATCTCCATTTTCATGAAC 58.179 34.615 7.89 0.00 31.07 3.18
73 74 9.513906 TTACTTGTGTATCTCCATTTTCATGAA 57.486 29.630 3.38 3.38 31.07 2.57
74 75 9.166173 CTTACTTGTGTATCTCCATTTTCATGA 57.834 33.333 0.00 0.00 31.07 3.07
75 76 8.950210 ACTTACTTGTGTATCTCCATTTTCATG 58.050 33.333 0.00 0.00 0.00 3.07
76 77 8.950210 CACTTACTTGTGTATCTCCATTTTCAT 58.050 33.333 0.00 0.00 33.61 2.57
77 78 8.322906 CACTTACTTGTGTATCTCCATTTTCA 57.677 34.615 0.00 0.00 33.61 2.69
91 92 5.505654 CCAACTGGCTTTACACTTACTTGTG 60.506 44.000 0.00 0.00 43.07 3.33
92 93 4.578928 CCAACTGGCTTTACACTTACTTGT 59.421 41.667 0.00 0.00 0.00 3.16
93 94 5.108385 CCAACTGGCTTTACACTTACTTG 57.892 43.478 0.00 0.00 0.00 3.16
108 109 2.360350 AGTGCCATCGCCAACTGG 60.360 61.111 0.00 0.00 38.53 4.00
109 110 1.915614 GACAGTGCCATCGCCAACTG 61.916 60.000 1.96 1.96 42.13 3.16
110 111 1.672356 GACAGTGCCATCGCCAACT 60.672 57.895 0.00 0.00 0.00 3.16
111 112 1.308069 ATGACAGTGCCATCGCCAAC 61.308 55.000 0.00 0.00 0.00 3.77
112 113 1.002257 ATGACAGTGCCATCGCCAA 60.002 52.632 0.00 0.00 0.00 4.52
113 114 1.450134 GATGACAGTGCCATCGCCA 60.450 57.895 3.50 0.00 32.23 5.69
114 115 3.414272 GATGACAGTGCCATCGCC 58.586 61.111 3.50 0.00 32.23 5.54
117 118 7.834068 ATATATTTACGATGACAGTGCCATC 57.166 36.000 9.23 9.23 37.60 3.51
118 119 9.719355 TTAATATATTTACGATGACAGTGCCAT 57.281 29.630 2.68 0.00 0.00 4.40
119 120 9.203421 CTTAATATATTTACGATGACAGTGCCA 57.797 33.333 2.68 0.00 0.00 4.92
120 121 8.169268 GCTTAATATATTTACGATGACAGTGCC 58.831 37.037 2.68 0.00 0.00 5.01
121 122 8.926710 AGCTTAATATATTTACGATGACAGTGC 58.073 33.333 2.68 0.00 0.00 4.40
135 136 9.988815 AGTCGAAATCACAGAGCTTAATATATT 57.011 29.630 2.97 2.97 0.00 1.28
136 137 9.988815 AAGTCGAAATCACAGAGCTTAATATAT 57.011 29.630 0.00 0.00 0.00 0.86
137 138 9.464714 GAAGTCGAAATCACAGAGCTTAATATA 57.535 33.333 0.00 0.00 0.00 0.86
138 139 7.981789 TGAAGTCGAAATCACAGAGCTTAATAT 59.018 33.333 0.00 0.00 0.00 1.28
139 140 7.275779 GTGAAGTCGAAATCACAGAGCTTAATA 59.724 37.037 20.91 0.00 44.19 0.98
140 141 6.091441 GTGAAGTCGAAATCACAGAGCTTAAT 59.909 38.462 20.91 0.00 44.19 1.40
141 142 5.405571 GTGAAGTCGAAATCACAGAGCTTAA 59.594 40.000 20.91 0.00 44.19 1.85
142 143 4.923871 GTGAAGTCGAAATCACAGAGCTTA 59.076 41.667 20.91 0.00 44.19 3.09
143 144 3.743396 GTGAAGTCGAAATCACAGAGCTT 59.257 43.478 20.91 2.73 44.19 3.74
144 145 3.321497 GTGAAGTCGAAATCACAGAGCT 58.679 45.455 20.91 0.00 44.19 4.09
145 146 2.091277 CGTGAAGTCGAAATCACAGAGC 59.909 50.000 23.69 5.02 44.84 4.09
146 147 3.565516 TCGTGAAGTCGAAATCACAGAG 58.434 45.455 23.69 12.73 44.84 3.35
147 148 3.636282 TCGTGAAGTCGAAATCACAGA 57.364 42.857 23.69 19.30 44.84 3.41
148 149 3.981416 TCTTCGTGAAGTCGAAATCACAG 59.019 43.478 23.69 16.99 46.55 3.66
149 150 3.972403 TCTTCGTGAAGTCGAAATCACA 58.028 40.909 23.69 12.93 46.55 3.58
150 151 6.627690 TTATCTTCGTGAAGTCGAAATCAC 57.372 37.500 17.56 17.56 46.55 3.06
151 152 5.288712 GCTTATCTTCGTGAAGTCGAAATCA 59.711 40.000 9.29 0.00 46.55 2.57
152 153 5.517054 AGCTTATCTTCGTGAAGTCGAAATC 59.483 40.000 9.29 0.00 46.55 2.17
153 154 5.411781 AGCTTATCTTCGTGAAGTCGAAAT 58.588 37.500 9.29 0.00 46.55 2.17
154 155 4.806330 AGCTTATCTTCGTGAAGTCGAAA 58.194 39.130 9.29 0.71 46.55 3.46
155 156 4.436242 AGCTTATCTTCGTGAAGTCGAA 57.564 40.909 9.29 0.00 45.46 3.71
156 157 4.413087 GAAGCTTATCTTCGTGAAGTCGA 58.587 43.478 0.00 0.00 41.48 4.20
157 158 4.746836 GAAGCTTATCTTCGTGAAGTCG 57.253 45.455 0.00 0.00 41.48 4.18
166 167 3.684788 TGAAGTTGCCGAAGCTTATCTTC 59.315 43.478 0.00 4.99 46.01 2.87
167 168 3.437049 GTGAAGTTGCCGAAGCTTATCTT 59.563 43.478 0.00 0.00 40.80 2.40
168 169 3.003480 GTGAAGTTGCCGAAGCTTATCT 58.997 45.455 0.00 0.00 40.80 1.98
169 170 2.096013 GGTGAAGTTGCCGAAGCTTATC 59.904 50.000 0.00 0.00 40.80 1.75
170 171 2.084546 GGTGAAGTTGCCGAAGCTTAT 58.915 47.619 0.00 0.00 40.80 1.73
171 172 1.202710 TGGTGAAGTTGCCGAAGCTTA 60.203 47.619 0.00 0.00 40.80 3.09
172 173 0.465460 TGGTGAAGTTGCCGAAGCTT 60.465 50.000 0.00 0.00 40.80 3.74
173 174 0.465460 TTGGTGAAGTTGCCGAAGCT 60.465 50.000 0.00 0.00 40.80 3.74
174 175 0.383949 TTTGGTGAAGTTGCCGAAGC 59.616 50.000 0.00 0.00 40.48 3.86
175 176 3.052036 CAATTTGGTGAAGTTGCCGAAG 58.948 45.455 0.00 0.00 32.21 3.79
176 177 2.428890 ACAATTTGGTGAAGTTGCCGAA 59.571 40.909 0.78 0.00 33.14 4.30
177 178 2.028130 ACAATTTGGTGAAGTTGCCGA 58.972 42.857 0.78 0.00 0.00 5.54
178 179 2.507339 ACAATTTGGTGAAGTTGCCG 57.493 45.000 0.78 0.00 0.00 5.69
179 180 4.584327 AGTACAATTTGGTGAAGTTGCC 57.416 40.909 0.78 0.00 0.00 4.52
180 181 6.908825 TCATAGTACAATTTGGTGAAGTTGC 58.091 36.000 0.78 0.00 0.00 4.17
181 182 8.322906 TCTCATAGTACAATTTGGTGAAGTTG 57.677 34.615 0.78 0.00 0.00 3.16
182 183 7.607991 CCTCTCATAGTACAATTTGGTGAAGTT 59.392 37.037 0.78 0.00 0.00 2.66
183 184 7.106239 CCTCTCATAGTACAATTTGGTGAAGT 58.894 38.462 0.78 0.00 0.00 3.01
184 185 6.037610 GCCTCTCATAGTACAATTTGGTGAAG 59.962 42.308 0.78 0.14 0.00 3.02
185 186 5.880332 GCCTCTCATAGTACAATTTGGTGAA 59.120 40.000 0.78 0.00 0.00 3.18
186 187 5.428253 GCCTCTCATAGTACAATTTGGTGA 58.572 41.667 0.78 0.00 0.00 4.02
187 188 4.576463 GGCCTCTCATAGTACAATTTGGTG 59.424 45.833 0.00 0.00 0.00 4.17
188 189 4.475016 AGGCCTCTCATAGTACAATTTGGT 59.525 41.667 0.00 0.00 0.00 3.67
189 190 5.041191 AGGCCTCTCATAGTACAATTTGG 57.959 43.478 0.00 0.00 0.00 3.28
190 191 5.757320 CAGAGGCCTCTCATAGTACAATTTG 59.243 44.000 33.06 13.14 42.34 2.32
191 192 5.663106 TCAGAGGCCTCTCATAGTACAATTT 59.337 40.000 33.06 3.67 42.34 1.82
192 193 5.211973 TCAGAGGCCTCTCATAGTACAATT 58.788 41.667 33.06 4.17 42.34 2.32
193 194 4.809193 TCAGAGGCCTCTCATAGTACAAT 58.191 43.478 33.06 4.40 42.34 2.71
194 195 4.251103 TCAGAGGCCTCTCATAGTACAA 57.749 45.455 33.06 6.75 42.34 2.41
195 196 3.953542 TCAGAGGCCTCTCATAGTACA 57.046 47.619 33.06 6.23 42.34 2.90
196 197 4.083003 CGAATCAGAGGCCTCTCATAGTAC 60.083 50.000 33.06 15.88 42.34 2.73
197 198 4.075682 CGAATCAGAGGCCTCTCATAGTA 58.924 47.826 33.06 13.77 42.34 1.82
198 199 2.890311 CGAATCAGAGGCCTCTCATAGT 59.110 50.000 33.06 19.50 42.34 2.12
199 200 2.890311 ACGAATCAGAGGCCTCTCATAG 59.110 50.000 33.06 23.62 42.34 2.23
200 201 2.625314 CACGAATCAGAGGCCTCTCATA 59.375 50.000 33.06 20.61 42.34 2.15
201 202 1.411977 CACGAATCAGAGGCCTCTCAT 59.588 52.381 33.06 24.24 42.34 2.90
202 203 0.820226 CACGAATCAGAGGCCTCTCA 59.180 55.000 33.06 22.79 42.34 3.27
203 204 0.820871 ACACGAATCAGAGGCCTCTC 59.179 55.000 33.06 20.07 37.98 3.20
204 205 2.028130 CTACACGAATCAGAGGCCTCT 58.972 52.381 30.40 30.40 41.37 3.69
205 206 1.751924 ACTACACGAATCAGAGGCCTC 59.248 52.381 26.22 26.22 0.00 4.70
206 207 1.853963 ACTACACGAATCAGAGGCCT 58.146 50.000 3.86 3.86 0.00 5.19
207 208 2.271800 CAACTACACGAATCAGAGGCC 58.728 52.381 0.00 0.00 0.00 5.19
208 209 2.271800 CCAACTACACGAATCAGAGGC 58.728 52.381 0.00 0.00 0.00 4.70
209 210 3.056821 TCACCAACTACACGAATCAGAGG 60.057 47.826 0.00 0.00 0.00 3.69
210 211 4.174411 TCACCAACTACACGAATCAGAG 57.826 45.455 0.00 0.00 0.00 3.35
211 212 4.556233 CTTCACCAACTACACGAATCAGA 58.444 43.478 0.00 0.00 0.00 3.27
212 213 3.123621 GCTTCACCAACTACACGAATCAG 59.876 47.826 0.00 0.00 0.00 2.90
213 214 3.064207 GCTTCACCAACTACACGAATCA 58.936 45.455 0.00 0.00 0.00 2.57
214 215 3.064207 TGCTTCACCAACTACACGAATC 58.936 45.455 0.00 0.00 0.00 2.52
215 216 3.120321 TGCTTCACCAACTACACGAAT 57.880 42.857 0.00 0.00 0.00 3.34
216 217 2.605837 TGCTTCACCAACTACACGAA 57.394 45.000 0.00 0.00 0.00 3.85
217 218 2.412870 CATGCTTCACCAACTACACGA 58.587 47.619 0.00 0.00 0.00 4.35
218 219 1.464608 CCATGCTTCACCAACTACACG 59.535 52.381 0.00 0.00 0.00 4.49
219 220 1.200020 GCCATGCTTCACCAACTACAC 59.800 52.381 0.00 0.00 0.00 2.90
220 221 1.533625 GCCATGCTTCACCAACTACA 58.466 50.000 0.00 0.00 0.00 2.74
221 222 0.447801 CGCCATGCTTCACCAACTAC 59.552 55.000 0.00 0.00 0.00 2.73
222 223 0.036164 ACGCCATGCTTCACCAACTA 59.964 50.000 0.00 0.00 0.00 2.24
223 224 0.823356 AACGCCATGCTTCACCAACT 60.823 50.000 0.00 0.00 0.00 3.16
224 225 0.664166 CAACGCCATGCTTCACCAAC 60.664 55.000 0.00 0.00 0.00 3.77
225 226 0.821301 TCAACGCCATGCTTCACCAA 60.821 50.000 0.00 0.00 0.00 3.67
226 227 0.821301 TTCAACGCCATGCTTCACCA 60.821 50.000 0.00 0.00 0.00 4.17
227 228 0.109597 CTTCAACGCCATGCTTCACC 60.110 55.000 0.00 0.00 0.00 4.02
228 229 0.109597 CCTTCAACGCCATGCTTCAC 60.110 55.000 0.00 0.00 0.00 3.18
229 230 0.250684 TCCTTCAACGCCATGCTTCA 60.251 50.000 0.00 0.00 0.00 3.02
230 231 0.449388 CTCCTTCAACGCCATGCTTC 59.551 55.000 0.00 0.00 0.00 3.86
231 232 0.036732 TCTCCTTCAACGCCATGCTT 59.963 50.000 0.00 0.00 0.00 3.91
232 233 0.254178 ATCTCCTTCAACGCCATGCT 59.746 50.000 0.00 0.00 0.00 3.79
233 234 0.659957 GATCTCCTTCAACGCCATGC 59.340 55.000 0.00 0.00 0.00 4.06
234 235 1.303309 GGATCTCCTTCAACGCCATG 58.697 55.000 0.00 0.00 0.00 3.66
235 236 0.179073 CGGATCTCCTTCAACGCCAT 60.179 55.000 0.00 0.00 0.00 4.40
236 237 1.218047 CGGATCTCCTTCAACGCCA 59.782 57.895 0.00 0.00 0.00 5.69
237 238 0.108329 TTCGGATCTCCTTCAACGCC 60.108 55.000 0.00 0.00 0.00 5.68
238 239 1.000145 GTTCGGATCTCCTTCAACGC 59.000 55.000 0.00 0.00 0.00 4.84
239 240 2.363788 TGTTCGGATCTCCTTCAACG 57.636 50.000 0.00 0.00 0.00 4.10
240 241 2.742589 GGTTGTTCGGATCTCCTTCAAC 59.257 50.000 14.09 14.09 37.55 3.18
241 242 2.290071 GGGTTGTTCGGATCTCCTTCAA 60.290 50.000 0.00 0.00 0.00 2.69
242 243 1.278127 GGGTTGTTCGGATCTCCTTCA 59.722 52.381 0.00 0.00 0.00 3.02
243 244 1.407025 GGGGTTGTTCGGATCTCCTTC 60.407 57.143 0.00 0.00 0.00 3.46
244 245 0.618981 GGGGTTGTTCGGATCTCCTT 59.381 55.000 0.00 0.00 0.00 3.36
245 246 0.252742 AGGGGTTGTTCGGATCTCCT 60.253 55.000 0.00 0.00 0.00 3.69
246 247 1.492764 TAGGGGTTGTTCGGATCTCC 58.507 55.000 0.00 0.00 0.00 3.71
247 248 3.055312 AGTTTAGGGGTTGTTCGGATCTC 60.055 47.826 0.00 0.00 0.00 2.75
248 249 2.910977 AGTTTAGGGGTTGTTCGGATCT 59.089 45.455 0.00 0.00 0.00 2.75
249 250 3.345508 AGTTTAGGGGTTGTTCGGATC 57.654 47.619 0.00 0.00 0.00 3.36
250 251 4.914177 TTAGTTTAGGGGTTGTTCGGAT 57.086 40.909 0.00 0.00 0.00 4.18
251 252 4.703379 TTTAGTTTAGGGGTTGTTCGGA 57.297 40.909 0.00 0.00 0.00 4.55
252 253 5.970317 ATTTTAGTTTAGGGGTTGTTCGG 57.030 39.130 0.00 0.00 0.00 4.30
253 254 6.639279 CACAATTTTAGTTTAGGGGTTGTTCG 59.361 38.462 0.00 0.00 0.00 3.95
254 255 6.422701 GCACAATTTTAGTTTAGGGGTTGTTC 59.577 38.462 0.00 0.00 0.00 3.18
255 256 6.099125 AGCACAATTTTAGTTTAGGGGTTGTT 59.901 34.615 0.00 0.00 0.00 2.83
256 257 5.600898 AGCACAATTTTAGTTTAGGGGTTGT 59.399 36.000 0.00 0.00 0.00 3.32
257 258 6.015434 AGAGCACAATTTTAGTTTAGGGGTTG 60.015 38.462 0.00 0.00 0.00 3.77
258 259 6.075315 AGAGCACAATTTTAGTTTAGGGGTT 58.925 36.000 0.00 0.00 0.00 4.11
259 260 5.641155 AGAGCACAATTTTAGTTTAGGGGT 58.359 37.500 0.00 0.00 0.00 4.95
260 261 6.389906 CAAGAGCACAATTTTAGTTTAGGGG 58.610 40.000 0.00 0.00 0.00 4.79
261 262 6.208599 TCCAAGAGCACAATTTTAGTTTAGGG 59.791 38.462 0.00 0.00 0.00 3.53
262 263 7.084486 GTCCAAGAGCACAATTTTAGTTTAGG 58.916 38.462 0.00 0.00 0.00 2.69
263 264 7.648142 TGTCCAAGAGCACAATTTTAGTTTAG 58.352 34.615 0.00 0.00 0.00 1.85
264 265 7.575414 TGTCCAAGAGCACAATTTTAGTTTA 57.425 32.000 0.00 0.00 0.00 2.01
265 266 6.463995 TGTCCAAGAGCACAATTTTAGTTT 57.536 33.333 0.00 0.00 0.00 2.66
266 267 6.265196 TGATGTCCAAGAGCACAATTTTAGTT 59.735 34.615 0.00 0.00 0.00 2.24
267 268 5.769662 TGATGTCCAAGAGCACAATTTTAGT 59.230 36.000 0.00 0.00 0.00 2.24
268 269 6.258230 TGATGTCCAAGAGCACAATTTTAG 57.742 37.500 0.00 0.00 0.00 1.85
269 270 6.040278 TGTTGATGTCCAAGAGCACAATTTTA 59.960 34.615 0.00 0.00 35.03 1.52
270 271 5.163426 TGTTGATGTCCAAGAGCACAATTTT 60.163 36.000 0.00 0.00 35.03 1.82
271 272 4.341806 TGTTGATGTCCAAGAGCACAATTT 59.658 37.500 0.00 0.00 35.03 1.82
272 273 3.890756 TGTTGATGTCCAAGAGCACAATT 59.109 39.130 0.00 0.00 35.03 2.32
273 274 3.489355 TGTTGATGTCCAAGAGCACAAT 58.511 40.909 0.00 0.00 35.03 2.71
274 275 2.929641 TGTTGATGTCCAAGAGCACAA 58.070 42.857 0.00 0.00 35.03 3.33
275 276 2.636647 TGTTGATGTCCAAGAGCACA 57.363 45.000 0.00 0.00 35.03 4.57
276 277 4.877823 TGATATGTTGATGTCCAAGAGCAC 59.122 41.667 0.00 0.00 35.03 4.40
277 278 5.101648 TGATATGTTGATGTCCAAGAGCA 57.898 39.130 0.00 0.00 35.03 4.26
278 279 6.094603 AGTTTGATATGTTGATGTCCAAGAGC 59.905 38.462 0.00 0.00 35.03 4.09
279 280 7.335171 TCAGTTTGATATGTTGATGTCCAAGAG 59.665 37.037 0.00 0.00 35.03 2.85
280 281 7.167535 TCAGTTTGATATGTTGATGTCCAAGA 58.832 34.615 0.00 0.00 35.03 3.02
281 282 7.381766 TCAGTTTGATATGTTGATGTCCAAG 57.618 36.000 0.00 0.00 35.03 3.61
282 283 7.757941 TTCAGTTTGATATGTTGATGTCCAA 57.242 32.000 0.00 0.00 0.00 3.53
283 284 7.757941 TTTCAGTTTGATATGTTGATGTCCA 57.242 32.000 0.00 0.00 0.00 4.02
306 307 2.821969 AGGCGCATCAATCAGTCTTTTT 59.178 40.909 10.83 0.00 0.00 1.94
307 308 2.440409 AGGCGCATCAATCAGTCTTTT 58.560 42.857 10.83 0.00 0.00 2.27
308 309 2.119801 AGGCGCATCAATCAGTCTTT 57.880 45.000 10.83 0.00 0.00 2.52
309 310 2.988010 TAGGCGCATCAATCAGTCTT 57.012 45.000 10.83 0.00 0.00 3.01
310 311 2.831333 CTTAGGCGCATCAATCAGTCT 58.169 47.619 10.83 0.00 0.00 3.24
311 312 1.262683 GCTTAGGCGCATCAATCAGTC 59.737 52.381 10.83 0.00 0.00 3.51
312 313 1.303309 GCTTAGGCGCATCAATCAGT 58.697 50.000 10.83 0.00 0.00 3.41
313 314 1.263484 CTGCTTAGGCGCATCAATCAG 59.737 52.381 10.83 7.01 42.25 2.90
314 315 1.302366 CTGCTTAGGCGCATCAATCA 58.698 50.000 10.83 0.35 42.25 2.57
315 316 1.262683 GACTGCTTAGGCGCATCAATC 59.737 52.381 10.83 0.00 42.25 2.67
316 317 1.303309 GACTGCTTAGGCGCATCAAT 58.697 50.000 10.83 0.00 42.25 2.57
317 318 0.036483 TGACTGCTTAGGCGCATCAA 60.036 50.000 10.83 0.00 42.25 2.57
318 319 0.036483 TTGACTGCTTAGGCGCATCA 60.036 50.000 10.83 0.00 42.25 3.07
319 320 1.003116 CATTGACTGCTTAGGCGCATC 60.003 52.381 10.83 0.00 42.25 3.91
320 321 1.019673 CATTGACTGCTTAGGCGCAT 58.980 50.000 10.83 3.98 42.25 4.73
321 322 1.026182 CCATTGACTGCTTAGGCGCA 61.026 55.000 10.83 0.00 42.25 6.09
322 323 1.026718 ACCATTGACTGCTTAGGCGC 61.027 55.000 0.00 0.00 42.25 6.53
323 324 1.453155 AACCATTGACTGCTTAGGCG 58.547 50.000 0.00 0.00 42.25 5.52
324 325 5.582689 ATTTAACCATTGACTGCTTAGGC 57.417 39.130 0.00 0.00 39.26 3.93
358 359 6.406400 GCATGGATAGTATCATGAGGTAGACC 60.406 46.154 18.79 1.93 42.25 3.85
359 360 6.153510 TGCATGGATAGTATCATGAGGTAGAC 59.846 42.308 18.79 0.00 42.25 2.59
360 361 6.256053 TGCATGGATAGTATCATGAGGTAGA 58.744 40.000 18.79 0.00 42.25 2.59
361 362 6.535963 TGCATGGATAGTATCATGAGGTAG 57.464 41.667 18.79 2.45 42.25 3.18
362 363 7.365028 GGAATGCATGGATAGTATCATGAGGTA 60.365 40.741 18.79 4.69 42.25 3.08
363 364 6.384342 AATGCATGGATAGTATCATGAGGT 57.616 37.500 18.79 0.00 42.25 3.85
364 365 5.821470 GGAATGCATGGATAGTATCATGAGG 59.179 44.000 18.79 5.52 42.25 3.86
365 366 6.412214 TGGAATGCATGGATAGTATCATGAG 58.588 40.000 18.79 6.71 42.25 2.90
366 367 6.377245 TGGAATGCATGGATAGTATCATGA 57.623 37.500 18.79 0.00 42.25 3.07
367 368 7.054751 AGATGGAATGCATGGATAGTATCATG 58.945 38.462 12.19 13.15 42.47 3.07
368 369 7.209340 AGATGGAATGCATGGATAGTATCAT 57.791 36.000 12.19 0.76 0.00 2.45
369 370 6.631763 AGATGGAATGCATGGATAGTATCA 57.368 37.500 12.19 0.00 0.00 2.15
370 371 7.934855 AAAGATGGAATGCATGGATAGTATC 57.065 36.000 0.00 1.11 0.00 2.24
371 372 9.458727 CTTAAAGATGGAATGCATGGATAGTAT 57.541 33.333 0.00 0.00 0.00 2.12
372 373 8.659527 TCTTAAAGATGGAATGCATGGATAGTA 58.340 33.333 0.00 0.00 0.00 1.82
373 374 7.520798 TCTTAAAGATGGAATGCATGGATAGT 58.479 34.615 0.00 0.00 0.00 2.12
374 375 7.991084 TCTTAAAGATGGAATGCATGGATAG 57.009 36.000 0.00 0.00 0.00 2.08
375 376 8.000709 ACTTCTTAAAGATGGAATGCATGGATA 58.999 33.333 0.00 0.00 36.30 2.59
376 377 6.837568 ACTTCTTAAAGATGGAATGCATGGAT 59.162 34.615 0.00 0.00 36.30 3.41
377 378 6.189859 ACTTCTTAAAGATGGAATGCATGGA 58.810 36.000 0.00 0.00 36.30 3.41
378 379 6.095860 TGACTTCTTAAAGATGGAATGCATGG 59.904 38.462 0.00 0.00 36.30 3.66
379 380 7.092137 TGACTTCTTAAAGATGGAATGCATG 57.908 36.000 0.00 0.00 36.30 4.06
380 381 7.893124 ATGACTTCTTAAAGATGGAATGCAT 57.107 32.000 0.00 0.00 36.30 3.96
381 382 7.394077 TGAATGACTTCTTAAAGATGGAATGCA 59.606 33.333 0.00 0.00 36.30 3.96
382 383 7.765307 TGAATGACTTCTTAAAGATGGAATGC 58.235 34.615 0.00 0.00 36.30 3.56
383 384 9.784680 CTTGAATGACTTCTTAAAGATGGAATG 57.215 33.333 0.00 0.00 36.30 2.67
384 385 9.525826 ACTTGAATGACTTCTTAAAGATGGAAT 57.474 29.630 0.00 0.00 36.30 3.01
385 386 8.924511 ACTTGAATGACTTCTTAAAGATGGAA 57.075 30.769 0.00 0.00 36.30 3.53
407 408 9.755064 CGAATCGAACAAATGATTAAGTTACTT 57.245 29.630 2.32 2.32 35.06 2.24
408 409 8.932791 ACGAATCGAACAAATGATTAAGTTACT 58.067 29.630 10.55 0.00 35.06 2.24
409 410 9.537848 AACGAATCGAACAAATGATTAAGTTAC 57.462 29.630 10.55 0.00 35.58 2.50
412 413 9.755064 CTAAACGAATCGAACAAATGATTAAGT 57.245 29.630 10.55 0.00 35.06 2.24
413 414 8.725046 GCTAAACGAATCGAACAAATGATTAAG 58.275 33.333 10.55 0.00 35.06 1.85
414 415 8.447833 AGCTAAACGAATCGAACAAATGATTAA 58.552 29.630 10.55 0.00 35.06 1.40
415 416 7.902917 CAGCTAAACGAATCGAACAAATGATTA 59.097 33.333 10.55 0.00 35.06 1.75
416 417 6.742718 CAGCTAAACGAATCGAACAAATGATT 59.257 34.615 10.55 0.00 37.52 2.57
417 418 6.128282 ACAGCTAAACGAATCGAACAAATGAT 60.128 34.615 10.55 0.00 0.00 2.45
418 419 5.178623 ACAGCTAAACGAATCGAACAAATGA 59.821 36.000 10.55 0.00 0.00 2.57
419 420 5.382303 ACAGCTAAACGAATCGAACAAATG 58.618 37.500 10.55 4.00 0.00 2.32
420 421 5.607119 ACAGCTAAACGAATCGAACAAAT 57.393 34.783 10.55 0.00 0.00 2.32
421 422 6.715344 ATACAGCTAAACGAATCGAACAAA 57.285 33.333 10.55 0.00 0.00 2.83
422 423 6.530567 CAATACAGCTAAACGAATCGAACAA 58.469 36.000 10.55 0.00 0.00 2.83
423 424 5.445407 GCAATACAGCTAAACGAATCGAACA 60.445 40.000 10.55 0.00 0.00 3.18
424 425 4.956184 GCAATACAGCTAAACGAATCGAAC 59.044 41.667 10.55 0.00 0.00 3.95
425 426 4.033587 GGCAATACAGCTAAACGAATCGAA 59.966 41.667 10.55 0.00 34.17 3.71
426 427 3.554324 GGCAATACAGCTAAACGAATCGA 59.446 43.478 10.55 0.00 34.17 3.59
427 428 3.308595 TGGCAATACAGCTAAACGAATCG 59.691 43.478 0.00 0.00 34.17 3.34
428 429 4.495844 GGTGGCAATACAGCTAAACGAATC 60.496 45.833 0.00 0.00 36.03 2.52
429 430 3.377172 GGTGGCAATACAGCTAAACGAAT 59.623 43.478 0.00 0.00 36.03 3.34
430 431 2.745281 GGTGGCAATACAGCTAAACGAA 59.255 45.455 0.00 0.00 36.03 3.85
431 432 2.352388 GGTGGCAATACAGCTAAACGA 58.648 47.619 0.00 0.00 36.03 3.85
432 433 1.400494 GGGTGGCAATACAGCTAAACG 59.600 52.381 0.00 0.00 38.80 3.60
433 434 1.400494 CGGGTGGCAATACAGCTAAAC 59.600 52.381 0.00 0.00 38.80 2.01
434 435 1.003812 ACGGGTGGCAATACAGCTAAA 59.996 47.619 0.00 0.00 38.80 1.85
435 436 0.616371 ACGGGTGGCAATACAGCTAA 59.384 50.000 0.00 0.00 38.80 3.09
436 437 1.411246 CTACGGGTGGCAATACAGCTA 59.589 52.381 0.00 0.00 38.80 3.32
437 438 0.178068 CTACGGGTGGCAATACAGCT 59.822 55.000 0.00 0.00 38.80 4.24
438 439 1.436983 GCTACGGGTGGCAATACAGC 61.437 60.000 2.04 0.00 37.02 4.40
439 440 0.107897 TGCTACGGGTGGCAATACAG 60.108 55.000 7.42 0.00 44.11 2.74
440 441 1.984020 TGCTACGGGTGGCAATACA 59.016 52.632 7.42 0.00 44.11 2.29
441 442 4.946038 TGCTACGGGTGGCAATAC 57.054 55.556 7.42 0.00 44.11 1.89
453 454 1.157870 ATATGCCCGTGCGTTGCTAC 61.158 55.000 0.00 0.00 41.78 3.58
454 455 0.462937 AATATGCCCGTGCGTTGCTA 60.463 50.000 0.00 0.00 41.78 3.49
455 456 1.312371 AAATATGCCCGTGCGTTGCT 61.312 50.000 0.00 0.00 41.78 3.91
456 457 0.378962 TAAATATGCCCGTGCGTTGC 59.621 50.000 0.00 0.00 41.78 4.17
457 458 1.668751 ACTAAATATGCCCGTGCGTTG 59.331 47.619 0.00 0.00 41.78 4.10
458 459 2.032680 ACTAAATATGCCCGTGCGTT 57.967 45.000 0.00 0.00 41.78 4.84
459 460 2.894763 TACTAAATATGCCCGTGCGT 57.105 45.000 0.00 0.00 41.78 5.24
460 461 3.310227 TGTTTACTAAATATGCCCGTGCG 59.690 43.478 0.00 0.00 41.78 5.34
461 462 4.886247 TGTTTACTAAATATGCCCGTGC 57.114 40.909 0.00 0.00 38.26 5.34
462 463 6.612247 TGATGTTTACTAAATATGCCCGTG 57.388 37.500 0.00 0.00 0.00 4.94
463 464 6.826741 AGTTGATGTTTACTAAATATGCCCGT 59.173 34.615 0.00 0.00 0.00 5.28
464 465 7.259290 AGTTGATGTTTACTAAATATGCCCG 57.741 36.000 0.00 0.00 0.00 6.13
518 519 0.040204 ATGGGTTCTGGAAAGGCTGG 59.960 55.000 0.00 0.00 0.00 4.85
674 675 3.992641 TCCTGGCGTGAGGGGAGA 61.993 66.667 2.45 0.00 33.41 3.71
1051 1062 3.591254 GAAAGTCAGAGGCGCCGGT 62.591 63.158 23.20 9.69 0.00 5.28
1052 1063 2.815647 GAAAGTCAGAGGCGCCGG 60.816 66.667 23.20 15.29 0.00 6.13
1062 1073 3.377798 GGTTAACAAACCACCGAAAGTCA 59.622 43.478 8.10 0.00 42.38 3.41
1063 1074 3.628942 AGGTTAACAAACCACCGAAAGTC 59.371 43.478 8.10 0.00 45.23 3.01
1064 1075 3.623703 AGGTTAACAAACCACCGAAAGT 58.376 40.909 8.10 0.00 45.23 2.66
1065 1076 4.642445 AAGGTTAACAAACCACCGAAAG 57.358 40.909 8.10 0.00 45.23 2.62
1069 1080 3.181498 ACGAAAAGGTTAACAAACCACCG 60.181 43.478 8.10 8.83 45.23 4.94
1083 1095 1.463444 GATCACCCAACGACGAAAAGG 59.537 52.381 0.00 0.00 0.00 3.11
1259 1272 3.582647 GGAAACCAAAATCAACTGGGGAT 59.417 43.478 0.00 0.00 37.00 3.85
1261 1274 2.972021 AGGAAACCAAAATCAACTGGGG 59.028 45.455 0.00 0.00 37.00 4.96
1311 1326 0.039527 GGACTTGGCACGCGAAAATT 60.040 50.000 15.93 0.00 0.00 1.82
1482 1498 2.976882 CCCTCAAATCCCGGACCTAATA 59.023 50.000 0.73 0.00 0.00 0.98
1487 1503 1.859841 AACCCCTCAAATCCCGGACC 61.860 60.000 0.73 0.00 0.00 4.46
1584 1600 6.384258 TCTTCAAACAAATCGAATTGGTCA 57.616 33.333 17.14 0.00 34.56 4.02
1597 1613 5.009210 CGACACCCCTAAAATCTTCAAACAA 59.991 40.000 0.00 0.00 0.00 2.83
1642 1658 9.396022 AGAAGAAACAAACAAAGATCAGAACTA 57.604 29.630 0.00 0.00 0.00 2.24
1658 1674 5.734720 AGCCGATCAGAATAGAAGAAACAA 58.265 37.500 0.00 0.00 0.00 2.83
1666 1682 5.344743 ACAGAAAAGCCGATCAGAATAGA 57.655 39.130 0.00 0.00 0.00 1.98
1667 1683 7.721286 ATAACAGAAAAGCCGATCAGAATAG 57.279 36.000 0.00 0.00 0.00 1.73
1814 1833 6.767902 AGGTAATTATGCTGTTGTATGGTGAG 59.232 38.462 0.00 0.00 0.00 3.51
1923 1942 5.301551 CAGTATCTGGTAGCTCTGATTCAGT 59.698 44.000 13.23 0.00 32.61 3.41
2290 2315 9.491675 AAAATGAGCATAATGTGTGAAATCAAA 57.508 25.926 0.00 0.00 0.00 2.69
2639 2717 7.498900 ACACTCATAAGAACATGACAAAAGACA 59.501 33.333 0.00 0.00 31.67 3.41
2698 2776 4.542931 AGTAGGCTAAAGGGGTTATGGTTT 59.457 41.667 0.00 0.00 0.00 3.27
2904 2984 9.700831 AACCTATAAAATAGAGAAAGCCACATT 57.299 29.630 0.00 0.00 0.00 2.71
3163 3321 2.723124 ACCGATGCCAAACAAATCAC 57.277 45.000 0.00 0.00 0.00 3.06
3459 3618 5.637810 TGAGAAAGTATACTGAAAAGGTGCG 59.362 40.000 6.06 0.00 0.00 5.34
4000 4183 2.645838 ACAGGAGTGCAGAAATGTGT 57.354 45.000 0.00 0.00 0.00 3.72
4105 4288 6.317391 GGACAGGAGAGAGACAATTATTTTGG 59.683 42.308 0.00 0.00 0.00 3.28
4115 4298 5.569630 GCATTAAAAGGACAGGAGAGAGACA 60.570 44.000 0.00 0.00 0.00 3.41
4162 4345 8.470657 AATCTCTAATAGTCTAGCATGTCACA 57.529 34.615 0.00 0.00 0.00 3.58
4188 4371 5.784906 AGAAATTGGAGGAAATAAAAGGGCA 59.215 36.000 0.00 0.00 0.00 5.36
4281 4464 6.429692 ACCGTGTTTTAGAACATTGATGATGA 59.570 34.615 1.73 0.00 46.63 2.92
4667 4999 3.135348 CAGGATCAGGGAATACTCAGCAA 59.865 47.826 0.00 0.00 0.00 3.91
4820 5166 8.204836 AGAGTTCTATGTGACTTAACTGTTTGT 58.795 33.333 0.00 0.00 30.83 2.83
5016 5362 1.216977 CCAGTGCCGTCGTATTCCA 59.783 57.895 0.00 0.00 0.00 3.53
5098 5456 2.603473 TGAGTGCGCCTACCCAGT 60.603 61.111 4.18 0.00 0.00 4.00
5121 5479 1.134521 ACAGCGTCTTGAGGTTGTCAA 60.135 47.619 6.92 0.00 43.26 3.18
5408 5774 1.350193 CACTCGGTTGATTCAGGTCG 58.650 55.000 0.00 0.00 0.00 4.79
5479 5849 5.163754 ACGAGATGCAAAATACACTTTAGGC 60.164 40.000 0.00 0.00 0.00 3.93
5487 5857 4.257731 TGGCTTACGAGATGCAAAATACA 58.742 39.130 0.00 0.00 0.00 2.29
5505 5875 1.338973 CATTCAACTGTGCAACTGGCT 59.661 47.619 0.00 0.00 45.15 4.75
5511 5881 1.470996 GGGGGCATTCAACTGTGCAA 61.471 55.000 0.00 0.00 43.00 4.08
5548 5918 3.548745 TTATCCACTCATCAGCACTGG 57.451 47.619 0.00 0.00 0.00 4.00
5587 5957 1.414550 GATCCCAGGACAAGGTAGCTC 59.585 57.143 0.00 0.00 0.00 4.09
5588 5958 1.008938 AGATCCCAGGACAAGGTAGCT 59.991 52.381 0.00 0.00 0.00 3.32
5589 5959 1.414550 GAGATCCCAGGACAAGGTAGC 59.585 57.143 0.00 0.00 0.00 3.58
5590 5960 2.697751 CAGAGATCCCAGGACAAGGTAG 59.302 54.545 0.00 0.00 0.00 3.18
5591 5961 2.314852 TCAGAGATCCCAGGACAAGGTA 59.685 50.000 0.00 0.00 0.00 3.08
5592 5962 1.079490 TCAGAGATCCCAGGACAAGGT 59.921 52.381 0.00 0.00 0.00 3.50
5593 5963 1.761784 CTCAGAGATCCCAGGACAAGG 59.238 57.143 0.00 0.00 0.00 3.61
5594 5964 1.138661 GCTCAGAGATCCCAGGACAAG 59.861 57.143 0.00 0.00 0.00 3.16
5595 5965 1.198713 GCTCAGAGATCCCAGGACAA 58.801 55.000 0.00 0.00 0.00 3.18
5596 5966 0.689080 GGCTCAGAGATCCCAGGACA 60.689 60.000 0.00 0.00 0.00 4.02
5631 6011 4.796606 ACTCTAACCCATGGATCCAATTG 58.203 43.478 20.67 13.61 0.00 2.32
5632 6012 5.472301 AACTCTAACCCATGGATCCAATT 57.528 39.130 20.67 13.11 0.00 2.32
5633 6013 5.672194 ACTAACTCTAACCCATGGATCCAAT 59.328 40.000 20.67 4.61 0.00 3.16
5634 6014 5.036916 ACTAACTCTAACCCATGGATCCAA 58.963 41.667 20.67 1.96 0.00 3.53
5635 6015 4.631234 ACTAACTCTAACCCATGGATCCA 58.369 43.478 18.88 18.88 0.00 3.41
5636 6016 5.612351 GAACTAACTCTAACCCATGGATCC 58.388 45.833 15.22 4.20 0.00 3.36
5637 6017 5.290386 CGAACTAACTCTAACCCATGGATC 58.710 45.833 15.22 0.00 0.00 3.36
5638 6018 4.101119 CCGAACTAACTCTAACCCATGGAT 59.899 45.833 15.22 4.04 0.00 3.41
5639 6019 3.449737 CCGAACTAACTCTAACCCATGGA 59.550 47.826 15.22 0.00 0.00 3.41
5640 6020 3.431766 CCCGAACTAACTCTAACCCATGG 60.432 52.174 4.14 4.14 0.00 3.66
5641 6021 3.197116 ACCCGAACTAACTCTAACCCATG 59.803 47.826 0.00 0.00 0.00 3.66
5642 6022 3.447950 ACCCGAACTAACTCTAACCCAT 58.552 45.455 0.00 0.00 0.00 4.00
5643 6023 2.827921 GACCCGAACTAACTCTAACCCA 59.172 50.000 0.00 0.00 0.00 4.51
5644 6024 2.827921 TGACCCGAACTAACTCTAACCC 59.172 50.000 0.00 0.00 0.00 4.11
5645 6025 3.509184 ACTGACCCGAACTAACTCTAACC 59.491 47.826 0.00 0.00 0.00 2.85
5646 6026 4.780275 ACTGACCCGAACTAACTCTAAC 57.220 45.455 0.00 0.00 0.00 2.34
5647 6027 5.510179 CCAAACTGACCCGAACTAACTCTAA 60.510 44.000 0.00 0.00 0.00 2.10
5648 6028 4.021719 CCAAACTGACCCGAACTAACTCTA 60.022 45.833 0.00 0.00 0.00 2.43
5649 6029 3.244112 CCAAACTGACCCGAACTAACTCT 60.244 47.826 0.00 0.00 0.00 3.24
5650 6030 3.064931 CCAAACTGACCCGAACTAACTC 58.935 50.000 0.00 0.00 0.00 3.01
5651 6031 2.701951 TCCAAACTGACCCGAACTAACT 59.298 45.455 0.00 0.00 0.00 2.24
5652 6032 2.804527 GTCCAAACTGACCCGAACTAAC 59.195 50.000 0.00 0.00 0.00 2.34
5653 6033 2.701951 AGTCCAAACTGACCCGAACTAA 59.298 45.455 0.00 0.00 35.83 2.24
5654 6034 2.298163 GAGTCCAAACTGACCCGAACTA 59.702 50.000 0.00 0.00 35.28 2.24
5655 6035 1.070289 GAGTCCAAACTGACCCGAACT 59.930 52.381 0.00 0.00 35.28 3.01
5656 6036 1.202604 TGAGTCCAAACTGACCCGAAC 60.203 52.381 0.00 0.00 35.28 3.95
5657 6037 1.124780 TGAGTCCAAACTGACCCGAA 58.875 50.000 0.00 0.00 35.28 4.30
5658 6038 1.124780 TTGAGTCCAAACTGACCCGA 58.875 50.000 0.00 0.00 35.28 5.14
5659 6039 1.202651 AGTTGAGTCCAAACTGACCCG 60.203 52.381 0.00 0.00 35.28 5.28
5660 6040 2.640316 AGTTGAGTCCAAACTGACCC 57.360 50.000 0.00 0.00 35.28 4.46
5661 6041 4.275196 GGTTTAGTTGAGTCCAAACTGACC 59.725 45.833 6.20 9.33 35.28 4.02
5662 6042 4.275196 GGGTTTAGTTGAGTCCAAACTGAC 59.725 45.833 6.20 5.20 35.28 3.51
5663 6043 4.080243 TGGGTTTAGTTGAGTCCAAACTGA 60.080 41.667 6.20 0.00 35.28 3.41
5664 6044 4.204012 TGGGTTTAGTTGAGTCCAAACTG 58.796 43.478 6.20 0.00 35.28 3.16
5665 6045 4.513406 TGGGTTTAGTTGAGTCCAAACT 57.487 40.909 1.87 1.87 38.88 2.66
5666 6046 4.583073 ACATGGGTTTAGTTGAGTCCAAAC 59.417 41.667 0.00 0.00 33.49 2.93
5667 6047 4.798882 ACATGGGTTTAGTTGAGTCCAAA 58.201 39.130 0.00 0.00 33.49 3.28
5668 6048 4.447138 ACATGGGTTTAGTTGAGTCCAA 57.553 40.909 0.00 0.00 0.00 3.53
5669 6049 5.310451 GTTACATGGGTTTAGTTGAGTCCA 58.690 41.667 0.00 0.00 0.00 4.02
5670 6050 4.390909 CGTTACATGGGTTTAGTTGAGTCC 59.609 45.833 0.00 0.00 0.00 3.85
5671 6051 4.142966 GCGTTACATGGGTTTAGTTGAGTC 60.143 45.833 0.00 0.00 0.00 3.36
5672 6052 3.749609 GCGTTACATGGGTTTAGTTGAGT 59.250 43.478 0.00 0.00 0.00 3.41
5673 6053 3.126343 GGCGTTACATGGGTTTAGTTGAG 59.874 47.826 0.00 0.00 0.00 3.02
5674 6054 3.075884 GGCGTTACATGGGTTTAGTTGA 58.924 45.455 0.00 0.00 0.00 3.18
5675 6055 2.162809 GGGCGTTACATGGGTTTAGTTG 59.837 50.000 0.00 0.00 0.00 3.16
5676 6056 2.439409 GGGCGTTACATGGGTTTAGTT 58.561 47.619 0.00 0.00 0.00 2.24
5677 6057 1.676615 CGGGCGTTACATGGGTTTAGT 60.677 52.381 0.00 0.00 0.00 2.24
5678 6058 1.011333 CGGGCGTTACATGGGTTTAG 58.989 55.000 0.00 0.00 0.00 1.85
5679 6059 0.392729 CCGGGCGTTACATGGGTTTA 60.393 55.000 0.00 0.00 0.00 2.01
5680 6060 1.676303 CCGGGCGTTACATGGGTTT 60.676 57.895 0.00 0.00 0.00 3.27
5681 6061 1.917336 ATCCGGGCGTTACATGGGTT 61.917 55.000 0.00 0.00 0.00 4.11
5682 6062 1.049855 TATCCGGGCGTTACATGGGT 61.050 55.000 0.00 0.00 0.00 4.51
5683 6063 0.107081 TTATCCGGGCGTTACATGGG 59.893 55.000 0.00 0.00 0.00 4.00
5684 6064 2.178912 ATTATCCGGGCGTTACATGG 57.821 50.000 0.00 0.00 0.00 3.66
5685 6065 4.378046 GCTTAATTATCCGGGCGTTACATG 60.378 45.833 0.00 0.00 0.00 3.21
5686 6066 3.749609 GCTTAATTATCCGGGCGTTACAT 59.250 43.478 0.00 0.00 0.00 2.29
5764 6144 0.894835 GGGCGGGTTTGAAACATCAT 59.105 50.000 10.53 0.00 0.00 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.