Multiple sequence alignment - TraesCS3D01G159200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G159200 chr3D 100.000 7795 0 0 1 7795 128551334 128543540 0.000000e+00 14395.0
1 TraesCS3D01G159200 chr3D 94.611 167 9 0 1754 1920 105119305 105119471 7.760000e-65 259.0
2 TraesCS3D01G159200 chr3D 84.375 160 25 0 7289 7448 7327791 7327632 2.910000e-34 158.0
3 TraesCS3D01G159200 chr3A 96.167 2948 80 15 2057 4987 140055503 140052572 0.000000e+00 4787.0
4 TraesCS3D01G159200 chr3A 97.266 1463 40 0 4983 6445 140052139 140050677 0.000000e+00 2481.0
5 TraesCS3D01G159200 chr3A 89.972 1077 48 27 708 1753 140056929 140055882 0.000000e+00 1336.0
6 TraesCS3D01G159200 chr3A 94.278 699 24 9 6498 7191 140050680 140049993 0.000000e+00 1055.0
7 TraesCS3D01G159200 chr3A 95.410 305 7 4 7492 7795 140043675 140043377 5.470000e-131 479.0
8 TraesCS3D01G159200 chr3A 94.083 169 10 0 1752 1920 291796843 291796675 2.790000e-64 257.0
9 TraesCS3D01G159200 chr3A 95.690 116 5 0 1920 2035 140055607 140055492 3.710000e-43 187.0
10 TraesCS3D01G159200 chr3A 89.041 146 9 5 1606 1748 140055809 140055668 2.890000e-39 174.0
11 TraesCS3D01G159200 chr3B 94.633 3093 120 22 1920 4987 182388200 182385129 0.000000e+00 4750.0
12 TraesCS3D01G159200 chr3B 96.871 1694 45 2 4983 6669 182384716 182383024 0.000000e+00 2828.0
13 TraesCS3D01G159200 chr3B 90.515 1708 103 33 88 1753 182390193 182388503 0.000000e+00 2202.0
14 TraesCS3D01G159200 chr3B 89.552 469 21 13 6706 7171 182383020 182382577 3.160000e-158 569.0
15 TraesCS3D01G159200 chr3B 94.932 296 8 4 7501 7795 182382446 182382157 2.560000e-124 457.0
16 TraesCS3D01G159200 chr3B 90.000 190 15 4 1751 1938 111133651 111133838 7.810000e-60 243.0
17 TraesCS3D01G159200 chr3B 88.889 153 7 5 1606 1753 182388426 182388279 6.210000e-41 180.0
18 TraesCS3D01G159200 chr3B 87.903 124 5 3 7154 7277 182382561 182382448 3.790000e-28 137.0
19 TraesCS3D01G159200 chr3B 94.915 59 3 0 13 71 182390246 182390188 8.330000e-15 93.5
20 TraesCS3D01G159200 chr2A 86.646 322 33 5 2872 3191 332066167 332066480 1.610000e-91 348.0
21 TraesCS3D01G159200 chr2A 93.056 216 15 0 7278 7493 695338848 695339063 4.540000e-82 316.0
22 TraesCS3D01G159200 chr5B 93.458 214 13 1 7281 7493 639783603 639783390 4.540000e-82 316.0
23 TraesCS3D01G159200 chr5B 94.083 169 10 0 1754 1922 560393710 560393878 2.790000e-64 257.0
24 TraesCS3D01G159200 chr2B 90.291 206 18 2 6526 6731 227321819 227322022 1.290000e-67 268.0
25 TraesCS3D01G159200 chr2B 95.238 168 8 0 1754 1921 689781720 689781887 4.640000e-67 267.0
26 TraesCS3D01G159200 chr7D 94.118 170 10 0 1754 1923 454473546 454473715 7.760000e-65 259.0
27 TraesCS3D01G159200 chr7D 94.611 167 9 0 1755 1921 530406900 530406734 7.760000e-65 259.0
28 TraesCS3D01G159200 chr7D 93.103 174 12 0 1748 1921 477150988 477151161 1.000000e-63 255.0
29 TraesCS3D01G159200 chr7D 85.507 69 10 0 13 81 28623061 28623129 1.080000e-08 73.1
30 TraesCS3D01G159200 chr7D 85.507 69 10 0 13 81 28623941 28623873 1.080000e-08 73.1
31 TraesCS3D01G159200 chr7D 91.304 46 4 0 111 156 247322379 247322334 6.530000e-06 63.9
32 TraesCS3D01G159200 chr2D 94.118 170 10 0 1754 1923 498944926 498944757 7.760000e-65 259.0
33 TraesCS3D01G159200 chr2D 80.000 170 30 4 7276 7443 111164672 111164839 1.060000e-23 122.0
34 TraesCS3D01G159200 chr4B 82.927 164 28 0 7283 7446 587007162 587006999 1.750000e-31 148.0
35 TraesCS3D01G159200 chr4B 94.286 35 2 0 10 44 17856519 17856553 4.000000e-03 54.7
36 TraesCS3D01G159200 chr1A 80.541 185 36 0 7283 7467 392459002 392458818 8.150000e-30 143.0
37 TraesCS3D01G159200 chr1B 79.661 177 35 1 7285 7461 416639672 416639497 8.210000e-25 126.0
38 TraesCS3D01G159200 chr6D 79.006 181 34 4 7283 7461 266396101 266395923 3.820000e-23 121.0
39 TraesCS3D01G159200 chr1D 78.142 183 39 1 7285 7467 312658797 312658616 1.780000e-21 115.0
40 TraesCS3D01G159200 chr5A 92.593 54 3 1 13 65 698792440 698792387 8.390000e-10 76.8
41 TraesCS3D01G159200 chr7B 97.368 38 1 0 17 54 741945718 741945755 1.820000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G159200 chr3D 128543540 128551334 7794 True 14395.0000 14395 100.000000 1 7795 1 chr3D.!!$R2 7794
1 TraesCS3D01G159200 chr3A 140049993 140056929 6936 True 1670.0000 4787 93.735667 708 7191 6 chr3A.!!$R3 6483
2 TraesCS3D01G159200 chr3B 182382157 182390246 8089 True 1402.0625 4750 92.276250 13 7795 8 chr3B.!!$R1 7782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 1.920705 GCTTATAGTCGTCGCTCGGTG 60.921 57.143 0.00 0.00 40.32 4.94 F
1500 1552 0.322456 TCGGCTGTTCCTTTCATGGG 60.322 55.000 0.00 0.00 0.00 4.00 F
1764 1824 0.171455 GGTGACAGCTACTCACTCCG 59.829 60.000 18.54 0.00 38.50 4.63 F
1817 1877 0.306228 TGGACAACAACACGCGAATG 59.694 50.000 15.93 11.19 0.00 2.67 F
1818 1878 0.306533 GGACAACAACACGCGAATGT 59.693 50.000 15.93 11.92 0.00 2.71 F
3515 3733 0.464036 TTGCAGGAGGTATGCGTAGG 59.536 55.000 0.00 0.00 46.87 3.18 F
4967 5197 2.558359 GGACACCATGAAGTTGGAAAGG 59.442 50.000 0.00 0.00 39.25 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1665 1720 0.038166 AAAGCTCCATGAGGCCGAAA 59.962 50.000 0.0 0.0 33.74 3.46 R
2494 2705 0.037232 GTCTTACCTGTTCGCTGCCT 60.037 55.000 0.0 0.0 0.00 4.75 R
3645 3863 1.615384 GCATTTCTTCTGAGCCTGGGT 60.615 52.381 0.0 0.0 0.00 4.51 R
3804 4022 4.764308 TGCTCAAATACACACAAGGCATAA 59.236 37.500 0.0 0.0 0.00 1.90 R
4005 4223 8.349245 CCAAGTAAAAATGTTGAGTGTGTATCA 58.651 33.333 0.0 0.0 0.00 2.15 R
4994 5677 0.314935 CCAATTTTGCAGCAGTCGGT 59.685 50.000 0.0 0.0 0.00 4.69 R
7076 7773 0.620556 AAGGGACCGCTCATTCACAT 59.379 50.000 0.0 0.0 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.662195 CGCTCTAGTGCTTATAGTCGTCG 60.662 52.174 14.40 0.00 0.00 5.12
48 49 1.920705 GCTTATAGTCGTCGCTCGGTG 60.921 57.143 0.00 0.00 40.32 4.94
58 59 3.771160 GCTCGGTGGTCCACGGAT 61.771 66.667 27.13 0.00 41.48 4.18
71 72 6.098409 GTGGTCCACGGATCTGGATATAATAT 59.902 42.308 6.18 0.00 42.50 1.28
72 73 7.287005 GTGGTCCACGGATCTGGATATAATATA 59.713 40.741 6.18 0.00 42.50 0.86
74 75 9.529823 GGTCCACGGATCTGGATATAATATATA 57.470 37.037 6.47 0.00 42.50 0.86
245 246 5.081032 CAACCCAAAATACTACCCTTTCCA 58.919 41.667 0.00 0.00 0.00 3.53
262 263 8.971073 ACCCTTTCCATTCAAAACTATAAGATG 58.029 33.333 0.00 0.00 0.00 2.90
284 285 6.622833 TGTCCTAACTTTCTTTTTAACCGG 57.377 37.500 0.00 0.00 0.00 5.28
320 327 6.539324 TGTGTTTTAGTGTTCACTCTTTTCG 58.461 36.000 8.80 0.00 0.00 3.46
325 332 3.458189 AGTGTTCACTCTTTTCGGTCTG 58.542 45.455 0.00 0.00 0.00 3.51
329 336 6.015688 AGTGTTCACTCTTTTCGGTCTGTATA 60.016 38.462 0.00 0.00 0.00 1.47
403 410 4.657814 TGAAGTTTGAGGCCTCCTTTAT 57.342 40.909 29.95 13.46 31.76 1.40
447 454 5.582665 GCCTCCTTTAGTTCACACAATAGAG 59.417 44.000 0.00 0.00 0.00 2.43
454 461 9.823647 CTTTAGTTCACACAATAGAGGTATCAT 57.176 33.333 0.00 0.00 0.00 2.45
478 485 4.893524 AGGAACAGGAAAATCGGAAAAAGT 59.106 37.500 0.00 0.00 0.00 2.66
487 494 6.586463 GGAAAATCGGAAAAAGTCTCAATTCC 59.414 38.462 0.00 0.00 38.35 3.01
500 507 4.981674 GTCTCAATTCCGATAGAGCAAGAG 59.018 45.833 0.00 0.00 39.76 2.85
505 512 5.543507 ATTCCGATAGAGCAAGAGATGTT 57.456 39.130 0.00 0.00 39.76 2.71
508 515 6.018589 TCCGATAGAGCAAGAGATGTTATG 57.981 41.667 0.00 0.00 39.76 1.90
518 525 6.427242 AGCAAGAGATGTTATGTGATGCATAG 59.573 38.462 0.00 0.00 40.74 2.23
630 641 4.713792 ACAGACCAAAGACTCCAAAGAT 57.286 40.909 0.00 0.00 0.00 2.40
631 642 5.053978 ACAGACCAAAGACTCCAAAGATT 57.946 39.130 0.00 0.00 0.00 2.40
632 643 5.449553 ACAGACCAAAGACTCCAAAGATTT 58.550 37.500 0.00 0.00 0.00 2.17
633 644 5.893824 ACAGACCAAAGACTCCAAAGATTTT 59.106 36.000 0.00 0.00 0.00 1.82
634 645 6.381133 ACAGACCAAAGACTCCAAAGATTTTT 59.619 34.615 0.00 0.00 0.00 1.94
700 712 6.122277 TCCTACAAATAAATGAGGCTTGAGG 58.878 40.000 0.00 0.00 0.00 3.86
770 789 4.899687 GCGCCATGCTGCATGTCG 62.900 66.667 33.57 33.57 44.36 4.35
954 977 3.956317 CTGCACAGCGCTGCACAA 61.956 61.111 36.28 18.57 42.36 3.33
961 984 2.655044 GCGCTGCACAAACACACC 60.655 61.111 0.00 0.00 0.00 4.16
1022 1058 2.838467 GCTCCCCCTCCCATCCATG 61.838 68.421 0.00 0.00 0.00 3.66
1411 1461 1.080025 CACCTTCGACGAGTTCCCC 60.080 63.158 0.00 0.00 0.00 4.81
1462 1512 3.059868 GTCGCAAAAACGTTCATCTCTCA 60.060 43.478 0.00 0.00 0.00 3.27
1500 1552 0.322456 TCGGCTGTTCCTTTCATGGG 60.322 55.000 0.00 0.00 0.00 4.00
1534 1586 1.605058 CCCGTCACCTTCCATCGTCT 61.605 60.000 0.00 0.00 0.00 4.18
1536 1588 0.523546 CGTCACCTTCCATCGTCTCG 60.524 60.000 0.00 0.00 0.00 4.04
1540 1592 1.137086 CACCTTCCATCGTCTCGGATT 59.863 52.381 0.00 0.00 0.00 3.01
1541 1593 1.831736 ACCTTCCATCGTCTCGGATTT 59.168 47.619 0.00 0.00 0.00 2.17
1586 1638 5.982890 GGAAAATCCCTTCATTTCTGTGA 57.017 39.130 0.00 0.00 34.34 3.58
1657 1712 3.944087 AGAAGAGAAATCCGGAGTTTGG 58.056 45.455 19.55 0.00 0.00 3.28
1665 1720 3.732048 ATCCGGAGTTTGGGTGTAATT 57.268 42.857 11.34 0.00 0.00 1.40
1690 1750 0.392193 CCTCATGGAGCTTTGCGTCT 60.392 55.000 0.00 0.00 34.57 4.18
1712 1772 8.591312 CGTCTCTGAAAGAAGTGAAATATCTTC 58.409 37.037 0.00 0.00 46.34 2.87
1714 1774 9.868277 TCTCTGAAAGAAGTGAAATATCTTCTC 57.132 33.333 7.69 0.34 46.34 2.87
1762 1822 2.355717 GTGGTGACAGCTACTCACTC 57.644 55.000 18.54 11.77 44.46 3.51
1764 1824 0.171455 GGTGACAGCTACTCACTCCG 59.829 60.000 18.54 0.00 38.50 4.63
1765 1825 0.882474 GTGACAGCTACTCACTCCGT 59.118 55.000 13.98 0.00 35.99 4.69
1768 1828 0.889306 ACAGCTACTCACTCCGTTCC 59.111 55.000 0.00 0.00 0.00 3.62
1769 1829 1.178276 CAGCTACTCACTCCGTTCCT 58.822 55.000 0.00 0.00 0.00 3.36
1772 1832 3.192844 CAGCTACTCACTCCGTTCCTAAA 59.807 47.826 0.00 0.00 0.00 1.85
1774 1834 5.067413 CAGCTACTCACTCCGTTCCTAAATA 59.933 44.000 0.00 0.00 0.00 1.40
1775 1835 5.834204 AGCTACTCACTCCGTTCCTAAATAT 59.166 40.000 0.00 0.00 0.00 1.28
1776 1836 7.002879 AGCTACTCACTCCGTTCCTAAATATA 58.997 38.462 0.00 0.00 0.00 0.86
1778 1838 7.808856 GCTACTCACTCCGTTCCTAAATATAAG 59.191 40.741 0.00 0.00 0.00 1.73
1779 1839 7.657023 ACTCACTCCGTTCCTAAATATAAGT 57.343 36.000 0.00 0.00 0.00 2.24
1780 1840 7.714703 ACTCACTCCGTTCCTAAATATAAGTC 58.285 38.462 0.00 0.00 0.00 3.01
1781 1841 7.560626 ACTCACTCCGTTCCTAAATATAAGTCT 59.439 37.037 0.00 0.00 0.00 3.24
1782 1842 8.302515 TCACTCCGTTCCTAAATATAAGTCTT 57.697 34.615 0.00 0.00 0.00 3.01
1783 1843 8.755977 TCACTCCGTTCCTAAATATAAGTCTTT 58.244 33.333 0.00 0.00 0.00 2.52
1784 1844 9.379791 CACTCCGTTCCTAAATATAAGTCTTTT 57.620 33.333 0.00 0.00 0.00 2.27
1785 1845 9.955102 ACTCCGTTCCTAAATATAAGTCTTTTT 57.045 29.630 0.00 0.00 0.00 1.94
1802 1862 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
1803 1863 8.912988 AGTCTTTTTAGACATTTCAAATGGACA 58.087 29.630 14.70 0.00 41.02 4.02
1804 1864 9.528018 GTCTTTTTAGACATTTCAAATGGACAA 57.472 29.630 14.70 2.31 38.59 3.18
1805 1865 9.528018 TCTTTTTAGACATTTCAAATGGACAAC 57.472 29.630 14.70 1.26 0.00 3.32
1807 1867 9.658799 TTTTTAGACATTTCAAATGGACAACAA 57.341 25.926 14.70 2.19 0.00 2.83
1808 1868 8.641499 TTTAGACATTTCAAATGGACAACAAC 57.359 30.769 14.70 0.00 0.00 3.32
1809 1869 6.219417 AGACATTTCAAATGGACAACAACA 57.781 33.333 14.70 0.00 0.00 3.33
1810 1870 6.042143 AGACATTTCAAATGGACAACAACAC 58.958 36.000 14.70 0.00 0.00 3.32
1811 1871 4.803088 ACATTTCAAATGGACAACAACACG 59.197 37.500 14.70 0.00 0.00 4.49
1812 1872 2.483583 TCAAATGGACAACAACACGC 57.516 45.000 0.00 0.00 0.00 5.34
1814 1874 1.018148 AAATGGACAACAACACGCGA 58.982 45.000 15.93 0.00 0.00 5.87
1815 1875 1.018148 AATGGACAACAACACGCGAA 58.982 45.000 15.93 0.00 0.00 4.70
1816 1876 1.234821 ATGGACAACAACACGCGAAT 58.765 45.000 15.93 0.00 0.00 3.34
1817 1877 0.306228 TGGACAACAACACGCGAATG 59.694 50.000 15.93 11.19 0.00 2.67
1818 1878 0.306533 GGACAACAACACGCGAATGT 59.693 50.000 15.93 11.92 0.00 2.71
1819 1879 1.527736 GGACAACAACACGCGAATGTA 59.472 47.619 15.93 0.00 30.75 2.29
1820 1880 2.158841 GGACAACAACACGCGAATGTAT 59.841 45.455 15.93 6.60 30.75 2.29
1821 1881 3.152983 GACAACAACACGCGAATGTATG 58.847 45.455 15.93 15.79 30.75 2.39
1822 1882 2.546368 ACAACAACACGCGAATGTATGT 59.454 40.909 15.93 16.34 30.75 2.29
1825 1885 3.840468 ACAACACGCGAATGTATGTAGA 58.160 40.909 15.93 0.00 30.75 2.59
1827 1887 3.497297 ACACGCGAATGTATGTAGACA 57.503 42.857 15.93 0.00 0.00 3.41
1828 1888 4.041740 ACACGCGAATGTATGTAGACAT 57.958 40.909 15.93 0.08 41.92 3.06
1829 1889 5.177725 ACACGCGAATGTATGTAGACATA 57.822 39.130 15.93 0.00 39.16 2.29
1831 1891 6.213677 ACACGCGAATGTATGTAGACATATT 58.786 36.000 15.93 0.00 39.16 1.28
1832 1892 6.700081 ACACGCGAATGTATGTAGACATATTT 59.300 34.615 15.93 3.75 39.16 1.40
1833 1893 7.223971 ACACGCGAATGTATGTAGACATATTTT 59.776 33.333 15.93 3.44 39.16 1.82
1834 1894 8.696175 CACGCGAATGTATGTAGACATATTTTA 58.304 33.333 15.93 0.00 39.16 1.52
1835 1895 8.912658 ACGCGAATGTATGTAGACATATTTTAG 58.087 33.333 15.93 5.05 39.16 1.85
1836 1896 9.124807 CGCGAATGTATGTAGACATATTTTAGA 57.875 33.333 0.00 0.00 39.16 2.10
1857 1917 8.718102 TTAGAGTATAGGTTCACTCATTTTGC 57.282 34.615 4.70 0.00 42.99 3.68
1858 1918 6.951971 AGAGTATAGGTTCACTCATTTTGCT 58.048 36.000 4.70 0.00 42.99 3.91
1859 1919 7.044798 AGAGTATAGGTTCACTCATTTTGCTC 58.955 38.462 4.70 0.00 42.99 4.26
1860 1920 6.116126 AGTATAGGTTCACTCATTTTGCTCC 58.884 40.000 0.00 0.00 0.00 4.70
1862 1922 1.880027 GGTTCACTCATTTTGCTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
1864 1924 3.689649 GGTTCACTCATTTTGCTCCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
1866 1926 5.527582 GGTTCACTCATTTTGCTCCGTATAT 59.472 40.000 0.00 0.00 0.00 0.86
1867 1927 6.704493 GGTTCACTCATTTTGCTCCGTATATA 59.296 38.462 0.00 0.00 0.00 0.86
1868 1928 7.095607 GGTTCACTCATTTTGCTCCGTATATAG 60.096 40.741 0.00 0.00 0.00 1.31
1869 1929 7.050970 TCACTCATTTTGCTCCGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
1870 1930 7.145985 TCACTCATTTTGCTCCGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
1872 1932 6.924060 ACTCATTTTGCTCCGTATATAGTCAC 59.076 38.462 0.00 0.00 0.00 3.67
1873 1933 7.050970 TCATTTTGCTCCGTATATAGTCACT 57.949 36.000 0.00 0.00 0.00 3.41
1874 1934 7.497595 TCATTTTGCTCCGTATATAGTCACTT 58.502 34.615 0.00 0.00 0.00 3.16
1875 1935 8.635328 TCATTTTGCTCCGTATATAGTCACTTA 58.365 33.333 0.00 0.00 0.00 2.24
1876 1936 9.424319 CATTTTGCTCCGTATATAGTCACTTAT 57.576 33.333 0.00 0.00 0.00 1.73
1877 1937 9.998106 ATTTTGCTCCGTATATAGTCACTTATT 57.002 29.630 0.00 0.00 0.00 1.40
1878 1938 8.812147 TTTGCTCCGTATATAGTCACTTATTG 57.188 34.615 0.00 0.00 0.00 1.90
1881 1941 7.231925 TGCTCCGTATATAGTCACTTATTGGAA 59.768 37.037 0.00 0.00 0.00 3.53
1883 1943 9.790389 CTCCGTATATAGTCACTTATTGGAATC 57.210 37.037 0.00 0.00 0.00 2.52
1885 1945 9.790389 CCGTATATAGTCACTTATTGGAATCTC 57.210 37.037 0.00 0.00 0.00 2.75
1893 1953 9.261035 AGTCACTTATTGGAATCTCTAGAAAGA 57.739 33.333 0.00 0.00 0.00 2.52
1894 1954 9.308318 GTCACTTATTGGAATCTCTAGAAAGAC 57.692 37.037 0.00 0.00 0.00 3.01
1910 1970 8.202137 TCTAGAAAGACTTATATTTGGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
1911 1971 6.954232 AGAAAGACTTATATTTGGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
1912 1972 7.048512 AGAAAGACTTATATTTGGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
1913 1973 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
1915 1975 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
1918 1978 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1941 2137 8.129211 AGTAGTTGTCAGTTTTATGAGCAAAAC 58.871 33.333 3.80 3.80 44.91 2.43
1966 2162 0.966875 TGGATCAGCCAACCATGCAC 60.967 55.000 0.00 0.00 45.87 4.57
1987 2183 3.623960 ACGACACTAGCTCACTGATAGAC 59.376 47.826 0.00 0.00 38.01 2.59
1991 2187 5.746284 ACACTAGCTCACTGATAGACTACA 58.254 41.667 0.00 0.00 38.01 2.74
2055 2251 0.952280 CATGCAGTCCTCATCCATGC 59.048 55.000 0.00 0.00 37.40 4.06
2129 2326 4.789075 ACGAGCGCCGCATACGTT 62.789 61.111 13.36 2.66 43.32 3.99
2428 2625 1.906574 ACCGGAGCATTTGAGTCCTTA 59.093 47.619 9.46 0.00 0.00 2.69
2494 2705 2.437002 GGCAAATACGGCACCGGA 60.437 61.111 9.46 4.92 44.69 5.14
2514 2725 1.352156 GGCAGCGAACAGGTAAGACG 61.352 60.000 0.00 0.00 0.00 4.18
2575 2787 3.242739 GCCATAGTTGCATACTGTTTCCG 60.243 47.826 10.59 0.00 37.73 4.30
2578 2790 5.277490 CCATAGTTGCATACTGTTTCCGATG 60.277 44.000 10.59 5.69 37.73 3.84
2594 2806 7.175816 TGTTTCCGATGTTTCCATTTCTGAATA 59.824 33.333 0.00 0.00 0.00 1.75
2603 2815 6.855763 TTCCATTTCTGAATATTTGGTGCT 57.144 33.333 2.35 0.00 0.00 4.40
2669 2881 8.239314 TGCATCATTCACTGATTCTTTTTAGTC 58.761 33.333 0.00 0.00 42.07 2.59
2759 2971 5.954752 TCAGTCTGTTACAAGATCCATCTCT 59.045 40.000 0.00 0.00 35.76 3.10
2929 3141 9.685276 ATATGTTCAACTCAGGTCAATGATTAA 57.315 29.630 0.00 0.00 0.00 1.40
3176 3391 3.902150 TCAAACAGCAGAGTTCTAGACG 58.098 45.455 0.00 0.00 0.00 4.18
3283 3500 4.261801 ACATAAATGAAGTTCCTCACCCG 58.738 43.478 0.00 0.00 0.00 5.28
3515 3733 0.464036 TTGCAGGAGGTATGCGTAGG 59.536 55.000 0.00 0.00 46.87 3.18
3645 3863 5.551233 AGCTCTGAAAGTACAAACAGCATA 58.449 37.500 0.00 0.00 33.76 3.14
3916 4134 8.948631 TTGCAAGGTAGTGAATTAGATCTAAG 57.051 34.615 19.51 3.93 0.00 2.18
3917 4135 7.500992 TGCAAGGTAGTGAATTAGATCTAAGG 58.499 38.462 19.51 0.84 0.00 2.69
4004 4222 3.057526 TGTCGATGTACCTCAGTGTTCAG 60.058 47.826 0.00 0.00 0.00 3.02
4005 4223 3.057456 GTCGATGTACCTCAGTGTTCAGT 60.057 47.826 0.00 0.00 0.00 3.41
4006 4224 3.057526 TCGATGTACCTCAGTGTTCAGTG 60.058 47.826 1.62 1.62 0.00 3.66
4007 4225 3.057526 CGATGTACCTCAGTGTTCAGTGA 60.058 47.826 9.53 9.53 0.00 3.41
4064 4286 3.934579 CACACATGCTTGCATGTCTAGTA 59.065 43.478 30.82 0.00 43.24 1.82
4075 4297 4.342378 TGCATGTCTAGTACCCTTCAGATC 59.658 45.833 0.00 0.00 0.00 2.75
4076 4298 4.342378 GCATGTCTAGTACCCTTCAGATCA 59.658 45.833 0.00 0.00 0.00 2.92
4077 4299 5.508825 GCATGTCTAGTACCCTTCAGATCAG 60.509 48.000 0.00 0.00 0.00 2.90
4078 4300 5.194473 TGTCTAGTACCCTTCAGATCAGT 57.806 43.478 0.00 0.00 0.00 3.41
4239 4463 4.959723 TGCTGCTTCACACTATGCATATA 58.040 39.130 6.92 0.00 34.79 0.86
4538 4768 5.645497 GGCTATCTGCTTTGTTCCCATATAG 59.355 44.000 0.00 0.00 42.39 1.31
4967 5197 2.558359 GGACACCATGAAGTTGGAAAGG 59.442 50.000 0.00 0.00 39.25 3.11
4993 5676 1.270625 TGACGCTCGAAAGGGAATTGT 60.271 47.619 0.00 0.00 38.75 2.71
4994 5677 2.028839 TGACGCTCGAAAGGGAATTGTA 60.029 45.455 0.00 0.00 38.75 2.41
5211 5894 5.859205 AATTTACCCATCTGCAATTCCTC 57.141 39.130 0.00 0.00 0.00 3.71
5496 6179 4.494350 TGAAGCTCAAGCAAGTTTCATC 57.506 40.909 4.59 0.00 40.27 2.92
5505 6188 7.451501 TCAAGCAAGTTTCATCAATGTATCA 57.548 32.000 0.00 0.00 0.00 2.15
5535 6218 3.665745 ATCACATCAAAGTGGTTTGGC 57.334 42.857 0.00 0.00 42.98 4.52
5697 6380 4.002906 TGAGTTTATGACACACTGGGAC 57.997 45.455 0.00 0.00 0.00 4.46
5819 6502 1.678101 GGCATCCCTTCCTTGAAATCG 59.322 52.381 0.00 0.00 0.00 3.34
5891 6574 6.953520 TCCTTTGGTTTCATAGAATCATGGTT 59.046 34.615 0.00 0.00 0.00 3.67
5924 6607 4.107622 CAGTGCAAAATCGGGAAATGATC 58.892 43.478 0.00 0.00 0.00 2.92
5942 6625 3.516700 TGATCATGAAGAGGCTTCTGTCA 59.483 43.478 0.00 6.18 32.79 3.58
6173 6856 8.214364 GGAAGAAGGAACTGGTAATCTAATCAT 58.786 37.037 0.00 0.00 40.86 2.45
6195 6878 6.868339 TCATCACCATACTAAGCATTGTATCG 59.132 38.462 0.00 0.00 0.00 2.92
6251 6934 6.441924 ACACTCAAATATCTCCAGGAGAAGAA 59.558 38.462 23.66 12.12 42.27 2.52
6267 6950 5.508153 GGAGAAGAAGAAACTGGAAAAAGGC 60.508 44.000 0.00 0.00 0.00 4.35
6313 6996 6.890979 AGATGAAAGAAAAAGACAAGGAGG 57.109 37.500 0.00 0.00 0.00 4.30
6359 7042 4.683320 GGCAGATTTGAAAGAAGCAAAGAC 59.317 41.667 0.00 0.00 38.48 3.01
6445 7135 8.594550 AGAAGCCGTTAATATATAACAGTGGAT 58.405 33.333 0.00 0.00 0.00 3.41
6463 7153 6.036953 CAGTGGATCTGAAAGCTGATAACTTC 59.963 42.308 0.00 0.00 46.27 3.01
6466 7156 5.988561 GGATCTGAAAGCTGATAACTTCGAT 59.011 40.000 0.00 0.00 33.46 3.59
6609 7299 1.001406 AGGAAGAAGGAGCAGTTGACG 59.999 52.381 0.00 0.00 0.00 4.35
6684 7374 4.032558 GGCGAACAAGTACGAGAAAATAGG 59.967 45.833 0.00 0.00 0.00 2.57
6719 7409 3.066621 TGTCAAACACATGAAAGGACAGC 59.933 43.478 0.00 0.00 30.99 4.40
6732 7422 1.731433 GGACAGCCTATCGCCACGTA 61.731 60.000 0.00 0.00 38.78 3.57
7026 7723 9.558396 AATGTCAGAGATTTCTAGGATTTCATC 57.442 33.333 0.00 0.00 30.73 2.92
7092 7789 2.627945 TGTAATGTGAATGAGCGGTCC 58.372 47.619 12.85 0.00 0.00 4.46
7101 7798 0.620556 ATGAGCGGTCCCTTTGATGT 59.379 50.000 12.85 0.00 0.00 3.06
7117 7814 6.146837 CCTTTGATGTCTGAAGTTCACTACAG 59.853 42.308 17.06 3.38 0.00 2.74
7118 7815 5.791336 TGATGTCTGAAGTTCACTACAGT 57.209 39.130 17.06 8.98 0.00 3.55
7119 7816 6.894339 TGATGTCTGAAGTTCACTACAGTA 57.106 37.500 17.06 9.10 0.00 2.74
7120 7817 6.678878 TGATGTCTGAAGTTCACTACAGTAC 58.321 40.000 17.06 12.66 0.00 2.73
7121 7818 6.264518 TGATGTCTGAAGTTCACTACAGTACA 59.735 38.462 17.06 14.24 0.00 2.90
7127 7824 7.985184 TCTGAAGTTCACTACAGTACAATTTGT 59.015 33.333 7.30 7.30 0.00 2.83
7192 7920 4.021229 TGGTAGAGAAACTCCAGCGATTA 58.979 43.478 0.00 0.00 0.00 1.75
7214 7942 0.250252 TGCCAACGATGCACTCTGAA 60.250 50.000 0.00 0.00 32.85 3.02
7215 7943 1.089920 GCCAACGATGCACTCTGAAT 58.910 50.000 0.00 0.00 0.00 2.57
7216 7944 2.279741 GCCAACGATGCACTCTGAATA 58.720 47.619 0.00 0.00 0.00 1.75
7217 7945 2.874701 GCCAACGATGCACTCTGAATAT 59.125 45.455 0.00 0.00 0.00 1.28
7218 7946 4.058124 GCCAACGATGCACTCTGAATATA 58.942 43.478 0.00 0.00 0.00 0.86
7219 7947 4.692625 GCCAACGATGCACTCTGAATATAT 59.307 41.667 0.00 0.00 0.00 0.86
7220 7948 5.869344 GCCAACGATGCACTCTGAATATATA 59.131 40.000 0.00 0.00 0.00 0.86
7221 7949 6.035435 GCCAACGATGCACTCTGAATATATAG 59.965 42.308 0.00 0.00 0.00 1.31
7222 7950 6.035435 CCAACGATGCACTCTGAATATATAGC 59.965 42.308 0.00 0.00 0.00 2.97
7226 7954 6.755607 CGATGCACTCTGAATATATAGCACAT 59.244 38.462 0.00 0.00 33.18 3.21
7233 7961 7.121315 ACTCTGAATATATAGCACATACGCAGA 59.879 37.037 0.00 0.00 0.00 4.26
7264 7992 9.767684 GCTTTAATAGCACAAAAAGTTGTTTTT 57.232 25.926 0.00 0.00 46.47 1.94
7280 8008 6.767524 TTGTTTTTCAACAGTGATAGTGGT 57.232 33.333 0.00 0.00 43.92 4.16
7281 8009 6.767524 TGTTTTTCAACAGTGATAGTGGTT 57.232 33.333 0.00 0.00 38.03 3.67
7282 8010 7.164230 TGTTTTTCAACAGTGATAGTGGTTT 57.836 32.000 0.00 0.00 38.03 3.27
7283 8011 7.607250 TGTTTTTCAACAGTGATAGTGGTTTT 58.393 30.769 0.00 0.00 38.03 2.43
7284 8012 8.091449 TGTTTTTCAACAGTGATAGTGGTTTTT 58.909 29.630 0.00 0.00 38.03 1.94
7306 8034 6.563037 TTTTTAGGGGTTAAACCAAGCTTT 57.437 33.333 12.67 0.00 41.02 3.51
7307 8035 7.672122 TTTTTAGGGGTTAAACCAAGCTTTA 57.328 32.000 12.67 0.00 41.02 1.85
7308 8036 7.859026 TTTTAGGGGTTAAACCAAGCTTTAT 57.141 32.000 12.67 0.00 41.02 1.40
7309 8037 7.859026 TTTAGGGGTTAAACCAAGCTTTATT 57.141 32.000 12.67 0.00 41.02 1.40
7310 8038 8.953223 TTTAGGGGTTAAACCAAGCTTTATTA 57.047 30.769 12.67 0.00 41.02 0.98
7311 8039 6.845758 AGGGGTTAAACCAAGCTTTATTAC 57.154 37.500 12.67 0.00 41.02 1.89
7312 8040 6.558498 AGGGGTTAAACCAAGCTTTATTACT 58.442 36.000 12.67 0.00 41.02 2.24
7313 8041 6.662234 AGGGGTTAAACCAAGCTTTATTACTC 59.338 38.462 12.67 0.00 41.02 2.59
7314 8042 6.434965 GGGGTTAAACCAAGCTTTATTACTCA 59.565 38.462 12.67 0.00 41.02 3.41
7315 8043 7.039574 GGGGTTAAACCAAGCTTTATTACTCAA 60.040 37.037 12.67 0.00 41.02 3.02
7316 8044 8.361889 GGGTTAAACCAAGCTTTATTACTCAAA 58.638 33.333 4.11 0.00 41.02 2.69
7317 8045 9.923143 GGTTAAACCAAGCTTTATTACTCAAAT 57.077 29.630 0.00 0.00 38.42 2.32
7321 8049 7.775053 ACCAAGCTTTATTACTCAAATTCCA 57.225 32.000 0.00 0.00 0.00 3.53
7322 8050 7.602753 ACCAAGCTTTATTACTCAAATTCCAC 58.397 34.615 0.00 0.00 0.00 4.02
7323 8051 7.232534 ACCAAGCTTTATTACTCAAATTCCACA 59.767 33.333 0.00 0.00 0.00 4.17
7324 8052 8.253113 CCAAGCTTTATTACTCAAATTCCACAT 58.747 33.333 0.00 0.00 0.00 3.21
7325 8053 9.079833 CAAGCTTTATTACTCAAATTCCACATG 57.920 33.333 0.00 0.00 0.00 3.21
7326 8054 8.353423 AGCTTTATTACTCAAATTCCACATGT 57.647 30.769 0.00 0.00 0.00 3.21
7327 8055 9.461312 AGCTTTATTACTCAAATTCCACATGTA 57.539 29.630 0.00 0.00 0.00 2.29
7328 8056 9.722056 GCTTTATTACTCAAATTCCACATGTAG 57.278 33.333 0.00 0.00 0.00 2.74
7343 8071 6.194796 CACATGTAGTGGGATACAAAAAGG 57.805 41.667 0.00 0.00 44.69 3.11
7344 8072 5.125417 CACATGTAGTGGGATACAAAAAGGG 59.875 44.000 0.00 0.00 44.69 3.95
7345 8073 5.222254 ACATGTAGTGGGATACAAAAAGGGT 60.222 40.000 0.00 0.00 39.04 4.34
7346 8074 4.913784 TGTAGTGGGATACAAAAAGGGTC 58.086 43.478 0.00 0.00 32.80 4.46
7347 8075 4.351407 TGTAGTGGGATACAAAAAGGGTCA 59.649 41.667 0.00 0.00 32.80 4.02
7348 8076 4.675063 AGTGGGATACAAAAAGGGTCAT 57.325 40.909 0.00 0.00 39.74 3.06
7349 8077 4.344104 AGTGGGATACAAAAAGGGTCATG 58.656 43.478 0.00 0.00 39.74 3.07
7350 8078 3.447229 GTGGGATACAAAAAGGGTCATGG 59.553 47.826 0.00 0.00 39.74 3.66
7351 8079 3.031013 GGGATACAAAAAGGGTCATGGG 58.969 50.000 0.00 0.00 39.74 4.00
7352 8080 3.031013 GGATACAAAAAGGGTCATGGGG 58.969 50.000 0.00 0.00 0.00 4.96
7353 8081 3.309556 GGATACAAAAAGGGTCATGGGGA 60.310 47.826 0.00 0.00 0.00 4.81
7354 8082 2.309136 ACAAAAAGGGTCATGGGGAG 57.691 50.000 0.00 0.00 0.00 4.30
7355 8083 0.897621 CAAAAAGGGTCATGGGGAGC 59.102 55.000 0.00 0.00 43.35 4.70
7356 8084 0.486879 AAAAAGGGTCATGGGGAGCA 59.513 50.000 0.00 0.00 45.90 4.26
7357 8085 0.712380 AAAAGGGTCATGGGGAGCAT 59.288 50.000 0.00 0.00 45.90 3.79
7358 8086 0.259938 AAAGGGTCATGGGGAGCATC 59.740 55.000 0.00 0.00 45.90 3.91
7359 8087 0.920763 AAGGGTCATGGGGAGCATCA 60.921 55.000 0.00 0.00 45.90 3.07
7360 8088 0.920763 AGGGTCATGGGGAGCATCAA 60.921 55.000 0.00 0.00 45.90 2.57
7361 8089 0.466922 GGGTCATGGGGAGCATCAAG 60.467 60.000 0.00 0.00 45.90 3.02
7362 8090 1.105759 GGTCATGGGGAGCATCAAGC 61.106 60.000 0.00 0.00 43.54 4.01
7379 8107 2.747460 CCACATGTGGCGACCCTG 60.747 66.667 31.13 6.01 44.73 4.45
7380 8108 2.347114 CACATGTGGCGACCCTGA 59.653 61.111 18.51 0.00 0.00 3.86
7381 8109 1.078214 CACATGTGGCGACCCTGAT 60.078 57.895 18.51 0.00 0.00 2.90
7382 8110 1.091771 CACATGTGGCGACCCTGATC 61.092 60.000 18.51 0.00 0.00 2.92
7383 8111 1.267574 ACATGTGGCGACCCTGATCT 61.268 55.000 0.00 0.00 0.00 2.75
7384 8112 0.752658 CATGTGGCGACCCTGATCTA 59.247 55.000 0.00 0.00 0.00 1.98
7385 8113 1.043816 ATGTGGCGACCCTGATCTAG 58.956 55.000 0.00 0.00 0.00 2.43
7386 8114 0.324368 TGTGGCGACCCTGATCTAGT 60.324 55.000 0.00 0.00 0.00 2.57
7387 8115 0.103208 GTGGCGACCCTGATCTAGTG 59.897 60.000 0.00 0.00 0.00 2.74
7388 8116 0.033503 TGGCGACCCTGATCTAGTGA 60.034 55.000 0.00 0.00 0.00 3.41
7389 8117 1.112113 GGCGACCCTGATCTAGTGAA 58.888 55.000 0.00 0.00 0.00 3.18
7390 8118 1.689273 GGCGACCCTGATCTAGTGAAT 59.311 52.381 0.00 0.00 0.00 2.57
7391 8119 2.546795 GGCGACCCTGATCTAGTGAATG 60.547 54.545 0.00 0.00 0.00 2.67
7392 8120 2.362397 GCGACCCTGATCTAGTGAATGA 59.638 50.000 0.00 0.00 0.00 2.57
7393 8121 3.551863 GCGACCCTGATCTAGTGAATGAG 60.552 52.174 0.00 0.00 0.00 2.90
7394 8122 3.551863 CGACCCTGATCTAGTGAATGAGC 60.552 52.174 0.00 0.00 0.00 4.26
7395 8123 3.378512 ACCCTGATCTAGTGAATGAGCA 58.621 45.455 0.00 0.00 0.00 4.26
7396 8124 3.776969 ACCCTGATCTAGTGAATGAGCAA 59.223 43.478 0.00 0.00 0.00 3.91
7397 8125 4.225942 ACCCTGATCTAGTGAATGAGCAAA 59.774 41.667 0.00 0.00 0.00 3.68
7398 8126 4.574013 CCCTGATCTAGTGAATGAGCAAAC 59.426 45.833 0.00 0.00 0.00 2.93
7399 8127 5.426504 CCTGATCTAGTGAATGAGCAAACT 58.573 41.667 0.00 0.00 0.00 2.66
7400 8128 5.879223 CCTGATCTAGTGAATGAGCAAACTT 59.121 40.000 0.00 0.00 0.00 2.66
7401 8129 6.183360 CCTGATCTAGTGAATGAGCAAACTTG 60.183 42.308 0.00 0.00 0.00 3.16
7402 8130 5.645067 TGATCTAGTGAATGAGCAAACTTGG 59.355 40.000 0.00 0.00 0.00 3.61
7403 8131 3.753272 TCTAGTGAATGAGCAAACTTGGC 59.247 43.478 0.00 0.00 0.00 4.52
7404 8132 2.590821 AGTGAATGAGCAAACTTGGCT 58.409 42.857 0.00 0.00 46.07 4.75
7405 8133 3.754965 AGTGAATGAGCAAACTTGGCTA 58.245 40.909 0.00 0.00 42.78 3.93
7406 8134 4.144297 AGTGAATGAGCAAACTTGGCTAA 58.856 39.130 0.00 0.00 42.78 3.09
7407 8135 4.022849 AGTGAATGAGCAAACTTGGCTAAC 60.023 41.667 0.00 0.00 42.78 2.34
7408 8136 3.255642 TGAATGAGCAAACTTGGCTAACC 59.744 43.478 0.00 0.00 42.78 2.85
7409 8137 2.656947 TGAGCAAACTTGGCTAACCT 57.343 45.000 0.00 0.00 42.78 3.50
7410 8138 2.229792 TGAGCAAACTTGGCTAACCTG 58.770 47.619 0.00 0.00 42.78 4.00
7411 8139 2.230660 GAGCAAACTTGGCTAACCTGT 58.769 47.619 0.00 0.00 42.78 4.00
7412 8140 2.226674 GAGCAAACTTGGCTAACCTGTC 59.773 50.000 0.00 0.00 42.78 3.51
7413 8141 1.069227 GCAAACTTGGCTAACCTGTCG 60.069 52.381 0.00 0.00 36.63 4.35
7414 8142 2.489971 CAAACTTGGCTAACCTGTCGA 58.510 47.619 0.00 0.00 36.63 4.20
7415 8143 2.165319 AACTTGGCTAACCTGTCGAC 57.835 50.000 9.11 9.11 36.63 4.20
7416 8144 1.045407 ACTTGGCTAACCTGTCGACA 58.955 50.000 18.88 18.88 36.63 4.35
7417 8145 1.623811 ACTTGGCTAACCTGTCGACAT 59.376 47.619 20.40 7.08 36.63 3.06
7418 8146 2.271800 CTTGGCTAACCTGTCGACATC 58.728 52.381 20.40 4.33 36.63 3.06
7419 8147 0.172578 TGGCTAACCTGTCGACATCG 59.827 55.000 20.40 14.56 37.53 3.84
7420 8148 1.146358 GGCTAACCTGTCGACATCGC 61.146 60.000 20.40 15.75 39.60 4.58
7421 8149 0.179134 GCTAACCTGTCGACATCGCT 60.179 55.000 20.40 6.32 39.60 4.93
7422 8150 1.065102 GCTAACCTGTCGACATCGCTA 59.935 52.381 20.40 7.16 39.60 4.26
7423 8151 2.287668 GCTAACCTGTCGACATCGCTAT 60.288 50.000 20.40 5.28 39.60 2.97
7424 8152 2.961526 AACCTGTCGACATCGCTATT 57.038 45.000 20.40 4.64 39.60 1.73
7425 8153 4.556104 GCTAACCTGTCGACATCGCTATTA 60.556 45.833 20.40 10.13 39.60 0.98
7426 8154 3.627732 ACCTGTCGACATCGCTATTAG 57.372 47.619 20.40 3.58 39.60 1.73
7427 8155 2.950309 ACCTGTCGACATCGCTATTAGT 59.050 45.455 20.40 2.98 39.60 2.24
7428 8156 4.132336 ACCTGTCGACATCGCTATTAGTA 58.868 43.478 20.40 0.00 39.60 1.82
7429 8157 4.213694 ACCTGTCGACATCGCTATTAGTAG 59.786 45.833 20.40 2.02 39.60 2.57
7444 8172 7.475771 CTATTAGTAGCTCTGCCTTCAAAAG 57.524 40.000 0.00 0.00 0.00 2.27
7445 8173 3.778954 AGTAGCTCTGCCTTCAAAAGT 57.221 42.857 0.00 0.00 0.00 2.66
7446 8174 4.891992 AGTAGCTCTGCCTTCAAAAGTA 57.108 40.909 0.00 0.00 0.00 2.24
7447 8175 5.228945 AGTAGCTCTGCCTTCAAAAGTAA 57.771 39.130 0.00 0.00 0.00 2.24
7448 8176 5.241662 AGTAGCTCTGCCTTCAAAAGTAAG 58.758 41.667 0.00 0.00 0.00 2.34
7449 8177 2.816672 AGCTCTGCCTTCAAAAGTAAGC 59.183 45.455 0.00 0.00 0.00 3.09
7450 8178 2.554032 GCTCTGCCTTCAAAAGTAAGCA 59.446 45.455 0.00 0.00 0.00 3.91
7451 8179 3.004734 GCTCTGCCTTCAAAAGTAAGCAA 59.995 43.478 0.00 0.00 0.00 3.91
7452 8180 4.791974 CTCTGCCTTCAAAAGTAAGCAAG 58.208 43.478 0.00 0.00 0.00 4.01
7453 8181 3.004734 TCTGCCTTCAAAAGTAAGCAAGC 59.995 43.478 0.00 0.00 0.00 4.01
7454 8182 2.692557 TGCCTTCAAAAGTAAGCAAGCA 59.307 40.909 0.00 0.00 0.00 3.91
7455 8183 3.131933 TGCCTTCAAAAGTAAGCAAGCAA 59.868 39.130 0.00 0.00 0.00 3.91
7456 8184 4.202243 TGCCTTCAAAAGTAAGCAAGCAAT 60.202 37.500 0.00 0.00 0.00 3.56
7457 8185 4.751600 GCCTTCAAAAGTAAGCAAGCAATT 59.248 37.500 0.00 0.00 0.00 2.32
7458 8186 5.925969 GCCTTCAAAAGTAAGCAAGCAATTA 59.074 36.000 0.00 0.00 0.00 1.40
7459 8187 6.423604 GCCTTCAAAAGTAAGCAAGCAATTAA 59.576 34.615 0.00 0.00 0.00 1.40
7460 8188 7.042119 GCCTTCAAAAGTAAGCAAGCAATTAAA 60.042 33.333 0.00 0.00 0.00 1.52
7461 8189 8.992073 CCTTCAAAAGTAAGCAAGCAATTAAAT 58.008 29.630 0.00 0.00 0.00 1.40
7462 8190 9.801714 CTTCAAAAGTAAGCAAGCAATTAAATG 57.198 29.630 0.00 0.00 0.00 2.32
7463 8191 7.795859 TCAAAAGTAAGCAAGCAATTAAATGC 58.204 30.769 7.45 7.45 46.78 3.56
7476 8204 7.276953 GCAATTAAATGCTAACATCGTTTGT 57.723 32.000 8.29 0.00 43.06 2.83
7477 8205 7.728895 GCAATTAAATGCTAACATCGTTTGTT 58.271 30.769 8.29 10.46 42.87 2.83
7478 8206 8.220434 GCAATTAAATGCTAACATCGTTTGTTT 58.780 29.630 8.29 0.00 43.24 2.83
7479 8207 9.514822 CAATTAAATGCTAACATCGTTTGTTTG 57.485 29.630 10.80 10.15 46.51 2.93
7480 8208 9.469807 AATTAAATGCTAACATCGTTTGTTTGA 57.530 25.926 15.16 5.50 46.51 2.69
7481 8209 9.638239 ATTAAATGCTAACATCGTTTGTTTGAT 57.362 25.926 15.16 6.90 46.51 2.57
7482 8210 7.945033 AAATGCTAACATCGTTTGTTTGATT 57.055 28.000 15.16 10.51 46.51 2.57
7483 8211 7.945033 AATGCTAACATCGTTTGTTTGATTT 57.055 28.000 15.16 7.79 46.51 2.17
7484 8212 6.984740 TGCTAACATCGTTTGTTTGATTTC 57.015 33.333 15.16 3.46 46.51 2.17
7485 8213 6.499172 TGCTAACATCGTTTGTTTGATTTCA 58.501 32.000 15.16 5.26 46.51 2.69
7486 8214 6.636447 TGCTAACATCGTTTGTTTGATTTCAG 59.364 34.615 15.16 6.52 46.51 3.02
7487 8215 6.636850 GCTAACATCGTTTGTTTGATTTCAGT 59.363 34.615 15.16 0.00 46.51 3.41
7488 8216 7.801315 GCTAACATCGTTTGTTTGATTTCAGTA 59.199 33.333 15.16 0.00 46.51 2.74
7489 8217 9.658475 CTAACATCGTTTGTTTGATTTCAGTAA 57.342 29.630 10.80 0.00 46.51 2.24
7495 8223 9.658475 TCGTTTGTTTGATTTCAGTAATAACAG 57.342 29.630 0.00 0.00 30.40 3.16
7496 8224 9.445786 CGTTTGTTTGATTTCAGTAATAACAGT 57.554 29.630 0.00 0.00 30.40 3.55
7522 8250 8.618677 TGATAGTGGTACAATAGAAACGAGTAG 58.381 37.037 0.00 0.00 43.88 2.57
7523 8251 6.830873 AGTGGTACAATAGAAACGAGTAGT 57.169 37.500 0.00 0.00 44.16 2.73
7524 8252 6.618811 AGTGGTACAATAGAAACGAGTAGTG 58.381 40.000 0.00 0.00 44.16 2.74
7556 8284 5.998981 TCTAAAGCCCAACGAGTTGATAAAA 59.001 36.000 16.66 0.00 42.93 1.52
7590 8318 0.511221 CAAACTGCAGCAATGCAAGC 59.489 50.000 15.27 11.90 44.88 4.01
7606 8334 1.068748 CAAGCAGCAAAATCAGCGTCT 60.069 47.619 0.00 0.00 37.01 4.18
7662 8390 0.796312 AATCAAACAGCGGTACAGCG 59.204 50.000 12.42 9.84 43.00 5.18
7734 8463 3.876914 ACTCTCATCAAAGTCGCAAACAA 59.123 39.130 0.00 0.00 0.00 2.83
7744 8473 2.160813 AGTCGCAAACAACGAAAACAGT 59.839 40.909 0.00 0.00 41.93 3.55
7748 8477 4.093115 TCGCAAACAACGAAAACAGTCTTA 59.907 37.500 0.00 0.00 36.44 2.10
7749 8478 4.201558 CGCAAACAACGAAAACAGTCTTAC 59.798 41.667 0.00 0.00 0.00 2.34
7767 8496 7.224753 CAGTCTTACACATAACACAAGACAACT 59.775 37.037 13.46 0.00 44.78 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.135141 AGCACTAGAGCGAGCTGAAAG 60.135 52.381 0.84 0.00 40.15 2.62
11 12 0.891373 AGCACTAGAGCGAGCTGAAA 59.109 50.000 0.84 0.00 40.15 2.69
41 42 3.718210 GATCCGTGGACCACCGAGC 62.718 68.421 19.11 16.37 39.42 5.03
78 79 9.693739 TCAGAAGCAAAATATTATGACCCTAAA 57.306 29.630 0.00 0.00 0.00 1.85
79 80 9.120538 GTCAGAAGCAAAATATTATGACCCTAA 57.879 33.333 2.18 0.00 40.20 2.69
80 81 7.441157 CGTCAGAAGCAAAATATTATGACCCTA 59.559 37.037 7.00 0.00 42.05 3.53
81 82 6.260936 CGTCAGAAGCAAAATATTATGACCCT 59.739 38.462 7.00 0.00 42.05 4.34
82 83 6.038271 ACGTCAGAAGCAAAATATTATGACCC 59.962 38.462 7.00 0.00 42.05 4.46
83 84 7.016361 ACGTCAGAAGCAAAATATTATGACC 57.984 36.000 7.00 0.00 42.05 4.02
93 94 9.512435 GTAGTATAGATAACGTCAGAAGCAAAA 57.488 33.333 0.00 0.00 0.00 2.44
94 95 8.133627 GGTAGTATAGATAACGTCAGAAGCAAA 58.866 37.037 0.00 0.00 0.00 3.68
95 96 7.501559 AGGTAGTATAGATAACGTCAGAAGCAA 59.498 37.037 0.00 0.00 0.00 3.91
96 97 6.996879 AGGTAGTATAGATAACGTCAGAAGCA 59.003 38.462 0.00 0.00 0.00 3.91
97 98 7.437793 AGGTAGTATAGATAACGTCAGAAGC 57.562 40.000 0.00 0.00 0.00 3.86
208 209 5.682943 TTTGGGTTGAACTTTGATCGTAG 57.317 39.130 0.00 0.00 0.00 3.51
262 263 6.624352 ACCGGTTAAAAAGAAAGTTAGGAC 57.376 37.500 0.00 0.00 0.00 3.85
304 305 3.118738 ACAGACCGAAAAGAGTGAACACT 60.119 43.478 7.20 7.20 45.84 3.55
360 367 7.973048 TCAATGTAGTACTACCTTCATTCCT 57.027 36.000 26.41 1.30 32.25 3.36
367 374 8.095169 CCTCAAACTTCAATGTAGTACTACCTT 58.905 37.037 26.41 20.80 35.26 3.50
377 384 3.330701 AGGAGGCCTCAAACTTCAATGTA 59.669 43.478 33.29 0.00 0.00 2.29
389 396 8.421002 GCAAAAATAATAATAAAGGAGGCCTCA 58.579 33.333 33.29 14.25 30.89 3.86
403 410 3.131400 GGCCTCACCCGCAAAAATAATAA 59.869 43.478 0.00 0.00 0.00 1.40
447 454 5.701290 CCGATTTTCCTGTTCCTATGATACC 59.299 44.000 0.00 0.00 0.00 2.73
454 461 6.066032 ACTTTTTCCGATTTTCCTGTTCCTA 58.934 36.000 0.00 0.00 0.00 2.94
478 485 4.889995 TCTCTTGCTCTATCGGAATTGAGA 59.110 41.667 8.69 0.00 37.04 3.27
487 494 6.442112 TCACATAACATCTCTTGCTCTATCG 58.558 40.000 0.00 0.00 0.00 2.92
488 495 7.148606 GCATCACATAACATCTCTTGCTCTATC 60.149 40.741 0.00 0.00 0.00 2.08
500 507 9.440773 TTTCTATCCTATGCATCACATAACATC 57.559 33.333 0.19 0.00 40.75 3.06
684 695 5.441718 TCAGTTCCTCAAGCCTCATTTAT 57.558 39.130 0.00 0.00 0.00 1.40
686 697 3.795688 TCAGTTCCTCAAGCCTCATTT 57.204 42.857 0.00 0.00 0.00 2.32
700 712 0.459585 TATGCGCCGGTCTTCAGTTC 60.460 55.000 4.18 0.00 0.00 3.01
770 789 0.321653 ATCGTTGGAGAGGTGGCAAC 60.322 55.000 0.00 0.00 0.00 4.17
954 977 3.276846 GCTCGTTGCGGGTGTGTT 61.277 61.111 0.00 0.00 0.00 3.32
1022 1058 4.385358 AATAATGGATGGTTTTGGCGAC 57.615 40.909 0.00 0.00 0.00 5.19
1145 1191 0.438830 GAACCAACGTTGAGCTAGCG 59.561 55.000 29.35 12.89 39.09 4.26
1411 1461 5.163673 GGAGAACGTTTACCTGAGGTAGTAG 60.164 48.000 11.73 9.21 39.52 2.57
1500 1552 0.889306 ACGGGACAGCTTCTACAGTC 59.111 55.000 0.00 0.00 0.00 3.51
1541 1593 3.181456 CCACCAAAAGATCAGCCCAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
1574 1626 5.005094 TCATGCACATCTCACAGAAATGAA 58.995 37.500 0.00 0.00 0.00 2.57
1642 1694 1.905637 ACACCCAAACTCCGGATTTC 58.094 50.000 3.57 0.00 0.00 2.17
1657 1712 2.099098 CCATGAGGCCGAAAATTACACC 59.901 50.000 0.00 0.00 0.00 4.16
1665 1720 0.038166 AAAGCTCCATGAGGCCGAAA 59.962 50.000 0.00 0.00 33.74 3.46
1712 1772 6.000219 TGGACATTTCAGAAAGGAGAAAGAG 59.000 40.000 14.40 0.00 37.19 2.85
1714 1774 6.432162 TCATGGACATTTCAGAAAGGAGAAAG 59.568 38.462 14.40 2.00 37.19 2.62
1718 1778 6.579666 TTTCATGGACATTTCAGAAAGGAG 57.420 37.500 14.40 3.26 0.00 3.69
1753 1813 8.848182 ACTTATATTTAGGAACGGAGTGAGTAG 58.152 37.037 0.00 0.00 45.00 2.57
1754 1814 8.757982 ACTTATATTTAGGAACGGAGTGAGTA 57.242 34.615 0.00 0.00 45.00 2.59
1755 1815 7.560626 AGACTTATATTTAGGAACGGAGTGAGT 59.439 37.037 0.00 0.00 45.00 3.41
1757 1817 7.893124 AGACTTATATTTAGGAACGGAGTGA 57.107 36.000 0.00 0.00 45.00 3.41
1776 1836 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
1778 1838 9.528018 TTGTCCATTTGAAATGTCTAAAAAGAC 57.472 29.630 15.93 12.86 39.15 3.01
1779 1839 9.528018 GTTGTCCATTTGAAATGTCTAAAAAGA 57.472 29.630 15.93 1.84 0.00 2.52
1780 1840 9.311916 TGTTGTCCATTTGAAATGTCTAAAAAG 57.688 29.630 15.93 0.00 0.00 2.27
1781 1841 9.658799 TTGTTGTCCATTTGAAATGTCTAAAAA 57.341 25.926 15.93 6.88 0.00 1.94
1782 1842 9.092876 GTTGTTGTCCATTTGAAATGTCTAAAA 57.907 29.630 15.93 5.56 0.00 1.52
1783 1843 8.253810 TGTTGTTGTCCATTTGAAATGTCTAAA 58.746 29.630 15.93 3.49 0.00 1.85
1784 1844 7.704472 GTGTTGTTGTCCATTTGAAATGTCTAA 59.296 33.333 15.93 5.71 0.00 2.10
1785 1845 7.199766 GTGTTGTTGTCCATTTGAAATGTCTA 58.800 34.615 15.93 4.32 0.00 2.59
1788 1848 4.803088 CGTGTTGTTGTCCATTTGAAATGT 59.197 37.500 15.93 0.00 0.00 2.71
1789 1849 4.317980 GCGTGTTGTTGTCCATTTGAAATG 60.318 41.667 10.84 10.84 0.00 2.32
1790 1850 3.801594 GCGTGTTGTTGTCCATTTGAAAT 59.198 39.130 0.00 0.00 0.00 2.17
1791 1851 3.182967 GCGTGTTGTTGTCCATTTGAAA 58.817 40.909 0.00 0.00 0.00 2.69
1792 1852 2.792890 CGCGTGTTGTTGTCCATTTGAA 60.793 45.455 0.00 0.00 0.00 2.69
1795 1855 1.018148 TCGCGTGTTGTTGTCCATTT 58.982 45.000 5.77 0.00 0.00 2.32
1796 1856 1.018148 TTCGCGTGTTGTTGTCCATT 58.982 45.000 5.77 0.00 0.00 3.16
1798 1858 0.306228 CATTCGCGTGTTGTTGTCCA 59.694 50.000 5.77 0.00 0.00 4.02
1799 1859 0.306533 ACATTCGCGTGTTGTTGTCC 59.693 50.000 5.77 0.00 0.00 4.02
1800 1860 2.934107 TACATTCGCGTGTTGTTGTC 57.066 45.000 5.77 0.00 33.62 3.18
1801 1861 2.546368 ACATACATTCGCGTGTTGTTGT 59.454 40.909 5.77 11.78 33.62 3.32
1802 1862 3.181826 ACATACATTCGCGTGTTGTTG 57.818 42.857 5.77 11.25 33.62 3.33
1803 1863 4.090930 GTCTACATACATTCGCGTGTTGTT 59.909 41.667 5.77 0.00 33.62 2.83
1804 1864 3.611113 GTCTACATACATTCGCGTGTTGT 59.389 43.478 5.77 12.96 33.62 3.32
1805 1865 3.610677 TGTCTACATACATTCGCGTGTTG 59.389 43.478 5.77 8.03 33.62 3.33
1807 1867 3.497297 TGTCTACATACATTCGCGTGT 57.503 42.857 5.77 6.82 36.13 4.49
1808 1868 6.690704 AATATGTCTACATACATTCGCGTG 57.309 37.500 5.77 0.00 41.15 5.34
1809 1869 7.709269 AAAATATGTCTACATACATTCGCGT 57.291 32.000 5.77 0.00 41.15 6.01
1810 1870 9.124807 TCTAAAATATGTCTACATACATTCGCG 57.875 33.333 0.00 0.00 41.15 5.87
1831 1891 9.162764 GCAAAATGAGTGAACCTATACTCTAAA 57.837 33.333 0.00 0.00 42.86 1.85
1832 1892 8.540388 AGCAAAATGAGTGAACCTATACTCTAA 58.460 33.333 0.00 0.00 42.86 2.10
1833 1893 8.079211 AGCAAAATGAGTGAACCTATACTCTA 57.921 34.615 0.00 0.00 42.86 2.43
1834 1894 6.951971 AGCAAAATGAGTGAACCTATACTCT 58.048 36.000 0.00 0.00 42.86 3.24
1835 1895 6.258947 GGAGCAAAATGAGTGAACCTATACTC 59.741 42.308 0.00 0.00 42.77 2.59
1836 1896 6.116126 GGAGCAAAATGAGTGAACCTATACT 58.884 40.000 0.00 0.00 0.00 2.12
1838 1898 5.116180 CGGAGCAAAATGAGTGAACCTATA 58.884 41.667 0.00 0.00 0.00 1.31
1840 1900 3.244422 ACGGAGCAAAATGAGTGAACCTA 60.244 43.478 0.00 0.00 0.00 3.08
1841 1901 2.154462 CGGAGCAAAATGAGTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
1843 1903 4.946784 ATACGGAGCAAAATGAGTGAAC 57.053 40.909 0.00 0.00 0.00 3.18
1844 1904 7.497595 ACTATATACGGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
1846 1906 6.923508 TGACTATATACGGAGCAAAATGAGTG 59.076 38.462 0.00 0.00 0.00 3.51
1847 1907 6.924060 GTGACTATATACGGAGCAAAATGAGT 59.076 38.462 0.00 0.00 0.00 3.41
1848 1908 7.148641 AGTGACTATATACGGAGCAAAATGAG 58.851 38.462 0.00 0.00 0.00 2.90
1850 1910 7.715265 AAGTGACTATATACGGAGCAAAATG 57.285 36.000 0.00 0.00 0.00 2.32
1851 1911 9.998106 AATAAGTGACTATATACGGAGCAAAAT 57.002 29.630 0.00 0.00 0.00 1.82
1852 1912 9.256477 CAATAAGTGACTATATACGGAGCAAAA 57.744 33.333 0.00 0.00 0.00 2.44
1853 1913 7.870954 CCAATAAGTGACTATATACGGAGCAAA 59.129 37.037 0.00 0.00 0.00 3.68
1855 1915 6.717997 TCCAATAAGTGACTATATACGGAGCA 59.282 38.462 0.00 0.00 0.00 4.26
1856 1916 7.154435 TCCAATAAGTGACTATATACGGAGC 57.846 40.000 0.00 0.00 0.00 4.70
1857 1917 9.790389 GATTCCAATAAGTGACTATATACGGAG 57.210 37.037 0.00 0.00 0.00 4.63
1858 1918 9.529823 AGATTCCAATAAGTGACTATATACGGA 57.470 33.333 0.00 0.00 0.00 4.69
1859 1919 9.790389 GAGATTCCAATAAGTGACTATATACGG 57.210 37.037 0.00 0.00 0.00 4.02
1867 1927 9.261035 TCTTTCTAGAGATTCCAATAAGTGACT 57.739 33.333 0.00 0.00 0.00 3.41
1868 1928 9.308318 GTCTTTCTAGAGATTCCAATAAGTGAC 57.692 37.037 0.00 0.00 0.00 3.67
1869 1929 9.261035 AGTCTTTCTAGAGATTCCAATAAGTGA 57.739 33.333 0.00 0.00 0.00 3.41
1870 1930 9.883142 AAGTCTTTCTAGAGATTCCAATAAGTG 57.117 33.333 0.00 0.00 0.00 3.16
1883 1943 9.250624 CGTTCCCAAATATAAGTCTTTCTAGAG 57.749 37.037 0.00 0.00 0.00 2.43
1885 1945 8.202137 TCCGTTCCCAAATATAAGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
1887 1947 6.954232 TCCGTTCCCAAATATAAGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
1888 1948 6.260271 CCTCCGTTCCCAAATATAAGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
1889 1949 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
1890 1950 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
1892 1952 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
1893 1953 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
1894 1954 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
1897 1957 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
1898 1958 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1899 1959 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
1900 1960 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
1901 1961 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1903 1963 0.535797 CAACTACTCCCTCCGTTCCC 59.464 60.000 0.00 0.00 0.00 3.97
1904 1964 1.204231 GACAACTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 0.00 3.62
1905 1965 1.891150 TGACAACTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
1906 1966 1.893801 CTGACAACTACTCCCTCCGTT 59.106 52.381 0.00 0.00 0.00 4.44
1907 1967 1.203025 ACTGACAACTACTCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
1908 1968 1.546961 ACTGACAACTACTCCCTCCG 58.453 55.000 0.00 0.00 0.00 4.63
1910 1970 6.698380 TCATAAAACTGACAACTACTCCCTC 58.302 40.000 0.00 0.00 0.00 4.30
1911 1971 6.681729 TCATAAAACTGACAACTACTCCCT 57.318 37.500 0.00 0.00 0.00 4.20
1912 1972 5.351740 GCTCATAAAACTGACAACTACTCCC 59.648 44.000 0.00 0.00 0.00 4.30
1913 1973 5.932303 TGCTCATAAAACTGACAACTACTCC 59.068 40.000 0.00 0.00 0.00 3.85
1915 1975 7.801716 TTTGCTCATAAAACTGACAACTACT 57.198 32.000 0.00 0.00 0.00 2.57
1918 1978 6.096846 AGGTTTTGCTCATAAAACTGACAACT 59.903 34.615 12.19 0.39 45.35 3.16
1966 2162 3.874543 AGTCTATCAGTGAGCTAGTGTCG 59.125 47.826 0.00 0.00 0.00 4.35
2123 2320 2.076863 GCTTGCTTCAGGTGAACGTAT 58.923 47.619 0.00 0.00 0.00 3.06
2129 2326 1.051008 TCTCTGCTTGCTTCAGGTGA 58.949 50.000 0.00 0.00 32.63 4.02
2356 2553 1.379642 CCAGCAGGAGGATTTTCGCC 61.380 60.000 0.00 0.00 36.89 5.54
2428 2625 3.827008 ACAACATATCCAGAGATGCGT 57.173 42.857 2.25 0.00 33.59 5.24
2494 2705 0.037232 GTCTTACCTGTTCGCTGCCT 60.037 55.000 0.00 0.00 0.00 4.75
2514 2725 2.678336 GCAGAACCAGTGGTATGCTAAC 59.322 50.000 31.16 15.80 41.97 2.34
2578 2790 7.099120 AGCACCAAATATTCAGAAATGGAAAC 58.901 34.615 8.30 0.00 0.00 2.78
2603 2815 6.119536 ACGTATCAAAAATAAGCTCATGGGA 58.880 36.000 0.00 0.00 0.00 4.37
2669 2881 6.411630 TTTACCAATATTTTCCGTCGACAG 57.588 37.500 17.16 3.99 0.00 3.51
2705 2917 5.877564 AGAAAAATACTCTCCAGTTAGCAGC 59.122 40.000 0.00 0.00 33.62 5.25
2759 2971 5.010112 AGACATCTTTTCAAGAGTCGTCTCA 59.990 40.000 12.19 0.00 39.38 3.27
3021 3233 6.108687 TGATTTGAGGCTTCTAGTATGTGTG 58.891 40.000 0.00 0.00 0.00 3.82
3162 3377 4.334203 TCTTCTGATCGTCTAGAACTCTGC 59.666 45.833 0.00 0.00 0.00 4.26
3259 3476 5.163754 CGGGTGAGGAACTTCATTTATGTTC 60.164 44.000 0.00 0.00 41.55 3.18
3275 3492 2.358737 GAACTGCACCGGGTGAGG 60.359 66.667 30.65 21.73 35.23 3.86
3515 3733 3.435327 TCATGTCGGTCATACTGTTTTGC 59.565 43.478 0.00 0.00 34.67 3.68
3520 3738 6.538742 CCTTAATTTCATGTCGGTCATACTGT 59.461 38.462 0.00 0.00 34.67 3.55
3645 3863 1.615384 GCATTTCTTCTGAGCCTGGGT 60.615 52.381 0.00 0.00 0.00 4.51
3804 4022 4.764308 TGCTCAAATACACACAAGGCATAA 59.236 37.500 0.00 0.00 0.00 1.90
4004 4222 9.169468 CAAGTAAAAATGTTGAGTGTGTATCAC 57.831 33.333 0.00 0.00 46.46 3.06
4005 4223 8.349245 CCAAGTAAAAATGTTGAGTGTGTATCA 58.651 33.333 0.00 0.00 0.00 2.15
4006 4224 8.564574 TCCAAGTAAAAATGTTGAGTGTGTATC 58.435 33.333 0.00 0.00 0.00 2.24
4007 4225 8.458573 TCCAAGTAAAAATGTTGAGTGTGTAT 57.541 30.769 0.00 0.00 0.00 2.29
4064 4286 6.670027 AGATAAGTGTTACTGATCTGAAGGGT 59.330 38.462 7.82 0.00 43.28 4.34
4075 4297 6.726258 TTGTGCATGAGATAAGTGTTACTG 57.274 37.500 0.00 0.00 0.00 2.74
4076 4298 6.936900 ACTTTGTGCATGAGATAAGTGTTACT 59.063 34.615 0.00 0.00 0.00 2.24
4077 4299 7.133891 ACTTTGTGCATGAGATAAGTGTTAC 57.866 36.000 0.00 0.00 0.00 2.50
4078 4300 7.308529 CCAACTTTGTGCATGAGATAAGTGTTA 60.309 37.037 0.00 0.00 0.00 2.41
4191 4415 6.086371 GCGCAACAAGAAATAGTGAAGTTAAC 59.914 38.462 0.30 0.00 0.00 2.01
4255 4485 1.153588 GTCTGAGAGGAGCTGCAGC 60.154 63.158 31.53 31.53 42.49 5.25
4527 4757 6.314896 GCTTGATGTCTATGCTATATGGGAAC 59.685 42.308 0.00 0.00 0.00 3.62
4538 4768 1.510480 GGGCGGCTTGATGTCTATGC 61.510 60.000 9.56 0.00 0.00 3.14
4967 5197 0.924090 CCTTTCGAGCGTCAGTATGC 59.076 55.000 0.00 0.00 37.95 3.14
4993 5676 1.539388 CCAATTTTGCAGCAGTCGGTA 59.461 47.619 0.00 0.00 0.00 4.02
4994 5677 0.314935 CCAATTTTGCAGCAGTCGGT 59.685 50.000 0.00 0.00 0.00 4.69
5077 5760 4.704540 TCTTTGGTTCTGTTTTGCTCTCAA 59.295 37.500 0.00 0.00 0.00 3.02
5211 5894 5.812127 GGGCACTTCCTAAATGCAATAAAAG 59.188 40.000 0.00 0.00 41.27 2.27
5221 5904 1.681229 TCTGGGGGCACTTCCTAAAT 58.319 50.000 0.00 0.00 34.39 1.40
5496 6179 7.698836 TGTGATAGTCGACATTGATACATTG 57.301 36.000 19.50 0.00 0.00 2.82
5505 6188 5.582269 CCACTTTGATGTGATAGTCGACATT 59.418 40.000 19.50 3.87 40.12 2.71
5535 6218 5.118664 TGCTCTAACATTCTTTTCGTCTTCG 59.881 40.000 0.00 0.00 38.55 3.79
5860 6543 3.696051 TCTATGAAACCAAAGGAGCATGC 59.304 43.478 10.51 10.51 0.00 4.06
5924 6607 3.439476 CCTTTGACAGAAGCCTCTTCATG 59.561 47.826 8.98 6.83 0.00 3.07
5942 6625 5.946486 AGACCTTCATCAACTTTCTCCTTT 58.054 37.500 0.00 0.00 0.00 3.11
6173 6856 6.399639 TCGATACAATGCTTAGTATGGTGA 57.600 37.500 0.46 0.00 31.45 4.02
6251 6934 0.673985 GCCGCCTTTTTCCAGTTTCT 59.326 50.000 0.00 0.00 0.00 2.52
6267 6950 1.067821 GAAGGATCTAGTGGAGTGCCG 59.932 57.143 0.00 0.00 36.79 5.69
6313 6996 6.507023 CCATGTTTAATGGCCTTAGAATGAC 58.493 40.000 3.32 0.00 31.75 3.06
6445 7135 6.863275 TGTATCGAAGTTATCAGCTTTCAGA 58.137 36.000 0.00 0.00 0.00 3.27
6485 7175 4.293415 CTGCAATTCCAAGTTTGTGAGAC 58.707 43.478 0.00 0.00 0.00 3.36
6489 7179 3.125316 CACCTGCAATTCCAAGTTTGTG 58.875 45.455 0.00 0.00 0.00 3.33
6490 7180 2.102925 CCACCTGCAATTCCAAGTTTGT 59.897 45.455 0.00 0.00 0.00 2.83
6609 7299 4.189231 ACACTTGTGTTCACAGGAAGTAC 58.811 43.478 19.03 0.00 31.88 2.73
6684 7374 2.198406 GTTTGACAAAAGAAACCGGGC 58.802 47.619 6.32 0.00 0.00 6.13
6719 7409 2.613691 ACAGTTTTACGTGGCGATAGG 58.386 47.619 0.00 0.00 0.00 2.57
6732 7422 4.438200 CGAACACAGGCAAACTACAGTTTT 60.438 41.667 4.61 0.00 45.07 2.43
7076 7773 0.620556 AAGGGACCGCTCATTCACAT 59.379 50.000 0.00 0.00 0.00 3.21
7080 7777 1.672881 CATCAAAGGGACCGCTCATTC 59.327 52.381 0.00 0.00 0.00 2.67
7092 7789 5.991606 TGTAGTGAACTTCAGACATCAAAGG 59.008 40.000 0.00 0.00 0.00 3.11
7101 7798 7.985184 ACAAATTGTACTGTAGTGAACTTCAGA 59.015 33.333 19.99 5.12 41.93 3.27
7117 7814 7.866393 ACTAGTGTCAGTACTCACAAATTGTAC 59.134 37.037 0.00 0.00 37.07 2.90
7118 7815 7.948357 ACTAGTGTCAGTACTCACAAATTGTA 58.052 34.615 0.00 0.00 37.07 2.41
7119 7816 6.817184 ACTAGTGTCAGTACTCACAAATTGT 58.183 36.000 0.00 0.00 37.07 2.71
7120 7817 6.088217 CGACTAGTGTCAGTACTCACAAATTG 59.912 42.308 0.00 0.00 43.06 2.32
7121 7818 6.150318 CGACTAGTGTCAGTACTCACAAATT 58.850 40.000 0.00 0.00 43.06 1.82
7127 7824 3.413846 ACCGACTAGTGTCAGTACTCA 57.586 47.619 0.00 0.00 43.06 3.41
7214 7942 5.163509 CCCAGTCTGCGTATGTGCTATATAT 60.164 44.000 0.00 0.00 35.36 0.86
7215 7943 4.157840 CCCAGTCTGCGTATGTGCTATATA 59.842 45.833 0.00 0.00 35.36 0.86
7216 7944 3.056536 CCCAGTCTGCGTATGTGCTATAT 60.057 47.826 0.00 0.00 35.36 0.86
7217 7945 2.296190 CCCAGTCTGCGTATGTGCTATA 59.704 50.000 0.00 0.00 35.36 1.31
7218 7946 1.069204 CCCAGTCTGCGTATGTGCTAT 59.931 52.381 0.00 0.00 35.36 2.97
7219 7947 0.459899 CCCAGTCTGCGTATGTGCTA 59.540 55.000 0.00 0.00 35.36 3.49
7220 7948 1.219124 CCCAGTCTGCGTATGTGCT 59.781 57.895 0.00 0.00 35.36 4.40
7221 7949 2.464459 GCCCAGTCTGCGTATGTGC 61.464 63.158 0.00 0.00 0.00 4.57
7222 7950 0.391661 AAGCCCAGTCTGCGTATGTG 60.392 55.000 0.00 0.00 0.00 3.21
7226 7954 3.740141 GCTATTAAAGCCCAGTCTGCGTA 60.740 47.826 0.00 0.00 46.25 4.42
7283 8011 6.563037 AAAGCTTGGTTTAACCCCTAAAAA 57.437 33.333 12.02 0.00 37.50 1.94
7284 8012 7.859026 ATAAAGCTTGGTTTAACCCCTAAAA 57.141 32.000 12.02 0.00 37.50 1.52
7285 8013 7.859026 AATAAAGCTTGGTTTAACCCCTAAA 57.141 32.000 12.02 0.00 37.50 1.85
7286 8014 8.172070 AGTAATAAAGCTTGGTTTAACCCCTAA 58.828 33.333 12.02 0.00 37.50 2.69
7287 8015 7.701815 AGTAATAAAGCTTGGTTTAACCCCTA 58.298 34.615 12.02 0.00 37.50 3.53
7288 8016 6.558498 AGTAATAAAGCTTGGTTTAACCCCT 58.442 36.000 12.02 2.64 37.50 4.79
7289 8017 6.434965 TGAGTAATAAAGCTTGGTTTAACCCC 59.565 38.462 12.02 0.23 37.50 4.95
7290 8018 7.457024 TGAGTAATAAAGCTTGGTTTAACCC 57.543 36.000 12.02 0.00 37.50 4.11
7291 8019 9.923143 ATTTGAGTAATAAAGCTTGGTTTAACC 57.077 29.630 7.27 7.27 39.22 2.85
7295 8023 8.646900 TGGAATTTGAGTAATAAAGCTTGGTTT 58.353 29.630 0.00 3.33 0.00 3.27
7296 8024 8.088365 GTGGAATTTGAGTAATAAAGCTTGGTT 58.912 33.333 0.00 0.30 0.00 3.67
7297 8025 7.232534 TGTGGAATTTGAGTAATAAAGCTTGGT 59.767 33.333 0.00 0.00 0.00 3.67
7298 8026 7.601856 TGTGGAATTTGAGTAATAAAGCTTGG 58.398 34.615 0.00 0.00 0.00 3.61
7299 8027 9.079833 CATGTGGAATTTGAGTAATAAAGCTTG 57.920 33.333 0.00 0.00 0.00 4.01
7300 8028 8.806146 ACATGTGGAATTTGAGTAATAAAGCTT 58.194 29.630 0.00 0.00 0.00 3.74
7301 8029 8.353423 ACATGTGGAATTTGAGTAATAAAGCT 57.647 30.769 0.00 0.00 0.00 3.74
7302 8030 9.722056 CTACATGTGGAATTTGAGTAATAAAGC 57.278 33.333 9.11 0.00 0.00 3.51
7320 8048 5.125417 CCCTTTTTGTATCCCACTACATGTG 59.875 44.000 9.11 0.93 45.80 3.21
7321 8049 5.222254 ACCCTTTTTGTATCCCACTACATGT 60.222 40.000 2.69 2.69 31.94 3.21
7322 8050 5.261216 ACCCTTTTTGTATCCCACTACATG 58.739 41.667 0.00 0.00 31.94 3.21
7323 8051 5.014755 TGACCCTTTTTGTATCCCACTACAT 59.985 40.000 0.00 0.00 31.94 2.29
7324 8052 4.351407 TGACCCTTTTTGTATCCCACTACA 59.649 41.667 0.00 0.00 0.00 2.74
7325 8053 4.913784 TGACCCTTTTTGTATCCCACTAC 58.086 43.478 0.00 0.00 0.00 2.73
7326 8054 5.505780 CATGACCCTTTTTGTATCCCACTA 58.494 41.667 0.00 0.00 0.00 2.74
7327 8055 4.344104 CATGACCCTTTTTGTATCCCACT 58.656 43.478 0.00 0.00 0.00 4.00
7328 8056 3.447229 CCATGACCCTTTTTGTATCCCAC 59.553 47.826 0.00 0.00 0.00 4.61
7329 8057 3.565449 CCCATGACCCTTTTTGTATCCCA 60.565 47.826 0.00 0.00 0.00 4.37
7330 8058 3.031013 CCCATGACCCTTTTTGTATCCC 58.969 50.000 0.00 0.00 0.00 3.85
7331 8059 3.031013 CCCCATGACCCTTTTTGTATCC 58.969 50.000 0.00 0.00 0.00 2.59
7332 8060 3.954258 CTCCCCATGACCCTTTTTGTATC 59.046 47.826 0.00 0.00 0.00 2.24
7333 8061 3.881713 GCTCCCCATGACCCTTTTTGTAT 60.882 47.826 0.00 0.00 0.00 2.29
7334 8062 2.556559 GCTCCCCATGACCCTTTTTGTA 60.557 50.000 0.00 0.00 0.00 2.41
7335 8063 1.827245 GCTCCCCATGACCCTTTTTGT 60.827 52.381 0.00 0.00 0.00 2.83
7336 8064 0.897621 GCTCCCCATGACCCTTTTTG 59.102 55.000 0.00 0.00 0.00 2.44
7337 8065 0.486879 TGCTCCCCATGACCCTTTTT 59.513 50.000 0.00 0.00 0.00 1.94
7338 8066 0.712380 ATGCTCCCCATGACCCTTTT 59.288 50.000 0.00 0.00 31.48 2.27
7339 8067 0.259938 GATGCTCCCCATGACCCTTT 59.740 55.000 0.00 0.00 33.29 3.11
7340 8068 0.920763 TGATGCTCCCCATGACCCTT 60.921 55.000 0.00 0.00 33.29 3.95
7341 8069 0.920763 TTGATGCTCCCCATGACCCT 60.921 55.000 0.00 0.00 33.29 4.34
7342 8070 0.466922 CTTGATGCTCCCCATGACCC 60.467 60.000 0.00 0.00 33.29 4.46
7343 8071 1.105759 GCTTGATGCTCCCCATGACC 61.106 60.000 0.00 0.00 38.95 4.02
7344 8072 1.105759 GGCTTGATGCTCCCCATGAC 61.106 60.000 0.00 0.00 42.39 3.06
7345 8073 1.228228 GGCTTGATGCTCCCCATGA 59.772 57.895 0.00 0.00 42.39 3.07
7346 8074 1.076559 TGGCTTGATGCTCCCCATG 60.077 57.895 0.00 0.00 42.39 3.66
7347 8075 1.076485 GTGGCTTGATGCTCCCCAT 60.076 57.895 0.00 0.00 42.39 4.00
7348 8076 1.866483 ATGTGGCTTGATGCTCCCCA 61.866 55.000 0.00 0.00 42.39 4.96
7349 8077 1.076485 ATGTGGCTTGATGCTCCCC 60.076 57.895 0.00 0.00 42.39 4.81
7350 8078 0.682209 ACATGTGGCTTGATGCTCCC 60.682 55.000 0.00 0.00 42.39 4.30
7351 8079 0.454600 CACATGTGGCTTGATGCTCC 59.545 55.000 18.51 0.00 42.39 4.70
7352 8080 0.454600 CCACATGTGGCTTGATGCTC 59.545 55.000 31.13 0.00 44.73 4.26
7353 8081 2.575108 CCACATGTGGCTTGATGCT 58.425 52.632 31.13 0.00 44.73 3.79
7363 8091 1.078214 ATCAGGGTCGCCACATGTG 60.078 57.895 19.31 19.31 0.00 3.21
7364 8092 1.221840 GATCAGGGTCGCCACATGT 59.778 57.895 0.00 0.00 0.00 3.21
7365 8093 0.752658 TAGATCAGGGTCGCCACATG 59.247 55.000 0.00 0.00 0.00 3.21
7366 8094 1.043816 CTAGATCAGGGTCGCCACAT 58.956 55.000 0.00 0.00 0.00 3.21
7367 8095 0.324368 ACTAGATCAGGGTCGCCACA 60.324 55.000 0.00 0.00 0.00 4.17
7368 8096 0.103208 CACTAGATCAGGGTCGCCAC 59.897 60.000 0.00 0.00 0.00 5.01
7369 8097 0.033503 TCACTAGATCAGGGTCGCCA 60.034 55.000 0.00 0.00 0.00 5.69
7370 8098 1.112113 TTCACTAGATCAGGGTCGCC 58.888 55.000 0.00 0.00 0.00 5.54
7371 8099 2.362397 TCATTCACTAGATCAGGGTCGC 59.638 50.000 0.00 0.00 0.00 5.19
7372 8100 3.551863 GCTCATTCACTAGATCAGGGTCG 60.552 52.174 0.00 0.00 0.00 4.79
7373 8101 3.386078 TGCTCATTCACTAGATCAGGGTC 59.614 47.826 0.00 0.00 0.00 4.46
7374 8102 3.378512 TGCTCATTCACTAGATCAGGGT 58.621 45.455 0.00 0.00 0.00 4.34
7375 8103 4.412796 TTGCTCATTCACTAGATCAGGG 57.587 45.455 0.00 0.00 0.00 4.45
7376 8104 5.426504 AGTTTGCTCATTCACTAGATCAGG 58.573 41.667 0.00 0.00 0.00 3.86
7377 8105 6.183360 CCAAGTTTGCTCATTCACTAGATCAG 60.183 42.308 0.00 0.00 0.00 2.90
7378 8106 5.645067 CCAAGTTTGCTCATTCACTAGATCA 59.355 40.000 0.00 0.00 0.00 2.92
7379 8107 5.448360 GCCAAGTTTGCTCATTCACTAGATC 60.448 44.000 0.00 0.00 0.00 2.75
7380 8108 4.397417 GCCAAGTTTGCTCATTCACTAGAT 59.603 41.667 0.00 0.00 0.00 1.98
7381 8109 3.753272 GCCAAGTTTGCTCATTCACTAGA 59.247 43.478 0.00 0.00 0.00 2.43
7382 8110 3.755378 AGCCAAGTTTGCTCATTCACTAG 59.245 43.478 0.00 0.00 32.41 2.57
7383 8111 3.754965 AGCCAAGTTTGCTCATTCACTA 58.245 40.909 0.00 0.00 32.41 2.74
7384 8112 2.590821 AGCCAAGTTTGCTCATTCACT 58.409 42.857 0.00 0.00 32.41 3.41
7385 8113 4.229876 GTTAGCCAAGTTTGCTCATTCAC 58.770 43.478 4.45 0.00 40.23 3.18
7386 8114 3.255642 GGTTAGCCAAGTTTGCTCATTCA 59.744 43.478 4.45 0.00 40.23 2.57
7387 8115 3.507622 AGGTTAGCCAAGTTTGCTCATTC 59.492 43.478 4.45 0.00 40.23 2.67
7388 8116 3.256631 CAGGTTAGCCAAGTTTGCTCATT 59.743 43.478 4.45 0.00 40.23 2.57
7389 8117 2.821969 CAGGTTAGCCAAGTTTGCTCAT 59.178 45.455 4.45 0.00 40.23 2.90
7390 8118 2.229792 CAGGTTAGCCAAGTTTGCTCA 58.770 47.619 4.45 0.00 40.23 4.26
7391 8119 2.226674 GACAGGTTAGCCAAGTTTGCTC 59.773 50.000 4.45 0.00 40.23 4.26
7392 8120 2.230660 GACAGGTTAGCCAAGTTTGCT 58.769 47.619 6.69 6.69 42.81 3.91
7393 8121 1.069227 CGACAGGTTAGCCAAGTTTGC 60.069 52.381 0.00 0.00 37.19 3.68
7394 8122 2.223377 GTCGACAGGTTAGCCAAGTTTG 59.777 50.000 11.55 0.00 37.19 2.93
7395 8123 2.158871 TGTCGACAGGTTAGCCAAGTTT 60.159 45.455 15.76 0.00 37.19 2.66
7396 8124 1.414919 TGTCGACAGGTTAGCCAAGTT 59.585 47.619 15.76 0.00 37.19 2.66
7397 8125 1.045407 TGTCGACAGGTTAGCCAAGT 58.955 50.000 15.76 0.00 37.19 3.16
7398 8126 2.271800 GATGTCGACAGGTTAGCCAAG 58.728 52.381 24.41 0.00 37.19 3.61
7399 8127 1.403647 CGATGTCGACAGGTTAGCCAA 60.404 52.381 24.41 0.00 43.02 4.52
7400 8128 0.172578 CGATGTCGACAGGTTAGCCA 59.827 55.000 24.41 0.00 43.02 4.75
7401 8129 1.146358 GCGATGTCGACAGGTTAGCC 61.146 60.000 24.41 4.13 43.02 3.93
7402 8130 0.179134 AGCGATGTCGACAGGTTAGC 60.179 55.000 24.41 21.14 43.02 3.09
7403 8131 3.627732 ATAGCGATGTCGACAGGTTAG 57.372 47.619 24.41 13.17 43.02 2.34
7404 8132 4.577693 ACTAATAGCGATGTCGACAGGTTA 59.422 41.667 24.41 18.90 43.02 2.85
7405 8133 2.961526 AATAGCGATGTCGACAGGTT 57.038 45.000 24.41 17.42 43.02 3.50
7406 8134 2.950309 ACTAATAGCGATGTCGACAGGT 59.050 45.455 24.41 18.18 43.02 4.00
7407 8135 3.627732 ACTAATAGCGATGTCGACAGG 57.372 47.619 24.41 18.35 43.02 4.00
7408 8136 4.152526 GCTACTAATAGCGATGTCGACAG 58.847 47.826 24.41 12.34 44.36 3.51
7409 8137 4.143194 GCTACTAATAGCGATGTCGACA 57.857 45.455 22.48 22.48 44.36 4.35
7420 8148 7.044798 ACTTTTGAAGGCAGAGCTACTAATAG 58.955 38.462 0.00 0.00 0.00 1.73
7421 8149 6.947464 ACTTTTGAAGGCAGAGCTACTAATA 58.053 36.000 0.00 0.00 0.00 0.98
7422 8150 5.810095 ACTTTTGAAGGCAGAGCTACTAAT 58.190 37.500 0.00 0.00 0.00 1.73
7423 8151 5.228945 ACTTTTGAAGGCAGAGCTACTAA 57.771 39.130 0.00 0.00 0.00 2.24
7424 8152 4.891992 ACTTTTGAAGGCAGAGCTACTA 57.108 40.909 0.00 0.00 0.00 1.82
7425 8153 3.778954 ACTTTTGAAGGCAGAGCTACT 57.221 42.857 0.00 0.00 0.00 2.57
7426 8154 4.142795 GCTTACTTTTGAAGGCAGAGCTAC 60.143 45.833 0.00 0.00 0.00 3.58
7427 8155 4.003648 GCTTACTTTTGAAGGCAGAGCTA 58.996 43.478 0.00 0.00 0.00 3.32
7428 8156 2.816672 GCTTACTTTTGAAGGCAGAGCT 59.183 45.455 0.00 0.00 0.00 4.09
7429 8157 2.554032 TGCTTACTTTTGAAGGCAGAGC 59.446 45.455 0.00 0.00 0.00 4.09
7430 8158 4.791974 CTTGCTTACTTTTGAAGGCAGAG 58.208 43.478 0.00 0.00 0.00 3.35
7431 8159 3.004734 GCTTGCTTACTTTTGAAGGCAGA 59.995 43.478 0.00 0.00 0.00 4.26
7432 8160 3.243501 TGCTTGCTTACTTTTGAAGGCAG 60.244 43.478 0.00 0.00 0.00 4.85
7433 8161 2.692557 TGCTTGCTTACTTTTGAAGGCA 59.307 40.909 0.00 0.00 0.00 4.75
7434 8162 3.369546 TGCTTGCTTACTTTTGAAGGC 57.630 42.857 0.00 0.00 0.00 4.35
7435 8163 7.945033 TTAATTGCTTGCTTACTTTTGAAGG 57.055 32.000 0.00 0.00 0.00 3.46
7436 8164 9.801714 CATTTAATTGCTTGCTTACTTTTGAAG 57.198 29.630 0.00 0.00 0.00 3.02
7437 8165 8.281893 GCATTTAATTGCTTGCTTACTTTTGAA 58.718 29.630 13.73 0.00 39.57 2.69
7438 8166 7.795859 GCATTTAATTGCTTGCTTACTTTTGA 58.204 30.769 13.73 0.00 39.57 2.69
7439 8167 7.998081 GCATTTAATTGCTTGCTTACTTTTG 57.002 32.000 13.73 0.00 39.57 2.44
7450 8178 7.598493 ACAAACGATGTTAGCATTTAATTGCTT 59.402 29.630 25.16 11.07 44.89 3.91
7451 8179 7.090173 ACAAACGATGTTAGCATTTAATTGCT 58.910 30.769 23.90 23.90 43.39 3.91
7452 8180 7.276953 ACAAACGATGTTAGCATTTAATTGC 57.723 32.000 13.25 13.25 40.06 3.56
7469 8197 9.658475 CTGTTATTACTGAAATCAAACAAACGA 57.342 29.630 0.00 0.00 29.72 3.85
7470 8198 9.445786 ACTGTTATTACTGAAATCAAACAAACG 57.554 29.630 0.00 0.00 29.72 3.60
7478 8206 9.599866 CCACTATCACTGTTATTACTGAAATCA 57.400 33.333 0.00 0.00 0.00 2.57
7479 8207 9.601217 ACCACTATCACTGTTATTACTGAAATC 57.399 33.333 0.00 0.00 0.00 2.17
7481 8209 9.865321 GTACCACTATCACTGTTATTACTGAAA 57.135 33.333 0.00 0.00 0.00 2.69
7482 8210 9.027202 TGTACCACTATCACTGTTATTACTGAA 57.973 33.333 0.00 0.00 0.00 3.02
7483 8211 8.584063 TGTACCACTATCACTGTTATTACTGA 57.416 34.615 0.00 0.00 0.00 3.41
7484 8212 9.817809 ATTGTACCACTATCACTGTTATTACTG 57.182 33.333 0.00 0.00 0.00 2.74
7490 8218 9.865321 GTTTCTATTGTACCACTATCACTGTTA 57.135 33.333 0.00 0.00 0.00 2.41
7491 8219 7.544566 CGTTTCTATTGTACCACTATCACTGTT 59.455 37.037 0.00 0.00 0.00 3.16
7492 8220 7.033791 CGTTTCTATTGTACCACTATCACTGT 58.966 38.462 0.00 0.00 0.00 3.55
7493 8221 7.255569 TCGTTTCTATTGTACCACTATCACTG 58.744 38.462 0.00 0.00 0.00 3.66
7494 8222 7.122353 ACTCGTTTCTATTGTACCACTATCACT 59.878 37.037 0.00 0.00 0.00 3.41
7495 8223 7.256286 ACTCGTTTCTATTGTACCACTATCAC 58.744 38.462 0.00 0.00 0.00 3.06
7496 8224 7.400599 ACTCGTTTCTATTGTACCACTATCA 57.599 36.000 0.00 0.00 0.00 2.15
7497 8225 8.619546 ACTACTCGTTTCTATTGTACCACTATC 58.380 37.037 0.00 0.00 0.00 2.08
7498 8226 8.404000 CACTACTCGTTTCTATTGTACCACTAT 58.596 37.037 0.00 0.00 0.00 2.12
7499 8227 7.627088 GCACTACTCGTTTCTATTGTACCACTA 60.627 40.741 0.00 0.00 0.00 2.74
7503 8231 5.404946 TGCACTACTCGTTTCTATTGTACC 58.595 41.667 0.00 0.00 0.00 3.34
7522 8250 2.368439 TGGGCTTTAGATGTCATGCAC 58.632 47.619 0.00 0.00 0.00 4.57
7523 8251 2.754552 GTTGGGCTTTAGATGTCATGCA 59.245 45.455 0.00 0.00 0.00 3.96
7524 8252 2.223340 CGTTGGGCTTTAGATGTCATGC 60.223 50.000 0.00 0.00 0.00 4.06
7556 8284 5.255687 TGCAGTTTGGAGTATTGATGATGT 58.744 37.500 0.00 0.00 0.00 3.06
7590 8318 4.398247 GTTTCTAGACGCTGATTTTGCTG 58.602 43.478 0.00 0.00 0.00 4.41
7606 8334 1.135024 GTCGCATGGGTACGGTTTCTA 60.135 52.381 9.86 0.00 0.00 2.10
7662 8390 0.039708 GCAGAGGCAGCACTTGTTTC 60.040 55.000 0.00 0.00 40.72 2.78
7707 8435 2.159170 GCGACTTTGATGAGAGTAGCCT 60.159 50.000 0.00 0.00 38.19 4.58
7734 8463 6.535865 TGTGTTATGTGTAAGACTGTTTTCGT 59.464 34.615 0.00 0.00 35.66 3.85
7744 8473 6.481976 CCAGTTGTCTTGTGTTATGTGTAAGA 59.518 38.462 0.00 0.00 0.00 2.10
7748 8477 4.335315 CACCAGTTGTCTTGTGTTATGTGT 59.665 41.667 0.00 0.00 34.11 3.72
7749 8478 4.574421 TCACCAGTTGTCTTGTGTTATGTG 59.426 41.667 0.00 0.00 38.16 3.21
7767 8496 2.942804 TGAGCACCAAATTTCTCACCA 58.057 42.857 3.79 0.00 31.35 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.