Multiple sequence alignment - TraesCS3D01G149300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G149300 chr3D 100.000 3498 0 0 1 3498 114203765 114207262 0.000000e+00 6460.0
1 TraesCS3D01G149300 chr3D 100.000 180 0 0 3669 3848 114207433 114207612 2.220000e-87 333.0
2 TraesCS3D01G149300 chr3B 94.334 2771 120 12 755 3498 166655354 166652594 0.000000e+00 4213.0
3 TraesCS3D01G149300 chr3B 95.714 140 3 1 3669 3808 166652540 166652404 5.000000e-54 222.0
4 TraesCS3D01G149300 chr3A 94.395 2230 89 16 659 2873 110069116 110071324 0.000000e+00 3393.0
5 TraesCS3D01G149300 chr3A 100.000 28 0 0 3726 3753 493800332 493800359 7.000000e-03 52.8
6 TraesCS3D01G149300 chr5A 86.185 1701 217 13 1039 2727 472110684 472112378 0.000000e+00 1823.0
7 TraesCS3D01G149300 chr5A 80.636 346 61 5 1089 1431 38790202 38790544 2.950000e-66 263.0
8 TraesCS3D01G149300 chr5A 79.320 353 61 12 1085 1431 573599537 573599883 1.790000e-58 237.0
9 TraesCS3D01G149300 chr5D 85.630 1698 232 10 1039 2727 369578054 369579748 0.000000e+00 1773.0
10 TraesCS3D01G149300 chr5D 79.320 353 61 12 1085 1431 454202710 454203056 1.790000e-58 237.0
11 TraesCS3D01G149300 chr5D 83.146 178 16 6 3286 3454 415652186 415652358 2.390000e-32 150.0
12 TraesCS3D01G149300 chr5B 85.118 1700 237 11 1039 2727 438795347 438797041 0.000000e+00 1724.0
13 TraesCS3D01G149300 chr5B 79.755 163 21 8 3006 3158 387931456 387931616 1.460000e-19 108.0
14 TraesCS3D01G149300 chr2B 74.223 1738 351 85 1041 2725 639027496 639025803 4.190000e-179 638.0
15 TraesCS3D01G149300 chr2B 78.000 150 18 10 3321 3461 721292120 721292263 3.190000e-11 80.5
16 TraesCS3D01G149300 chr4A 85.612 278 28 9 1055 1324 92299494 92299767 8.140000e-72 281.0
17 TraesCS3D01G149300 chr4A 85.926 270 29 6 1062 1324 153317501 153317768 2.930000e-71 279.0
18 TraesCS3D01G149300 chr2A 81.618 272 33 6 1058 1324 523848135 523847876 3.900000e-50 209.0
19 TraesCS3D01G149300 chr2A 82.857 70 11 1 3423 3492 738410982 738410914 1.150000e-05 62.1
20 TraesCS3D01G149300 chr4B 83.117 154 15 7 3005 3158 591534232 591534090 3.120000e-26 130.0
21 TraesCS3D01G149300 chr4B 85.849 106 12 3 3005 3110 427276091 427276193 4.060000e-20 110.0
22 TraesCS3D01G149300 chr7B 87.850 107 10 3 3005 3110 627977211 627977315 5.220000e-24 122.0
23 TraesCS3D01G149300 chr6B 84.762 105 15 1 3006 3110 3727556 3727453 1.890000e-18 104.0
24 TraesCS3D01G149300 chr7D 83.178 107 15 3 3008 3112 478591312 478591417 1.140000e-15 95.3
25 TraesCS3D01G149300 chr4D 83.333 102 16 1 3006 3107 479007047 479006947 4.090000e-15 93.5
26 TraesCS3D01G149300 chr6A 82.569 109 12 5 3012 3117 16532726 16532622 5.300000e-14 89.8
27 TraesCS3D01G149300 chr6D 80.769 78 14 1 1400 1476 346071261 346071184 4.150000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G149300 chr3D 114203765 114207612 3847 False 3396.5 6460 100.000 1 3848 2 chr3D.!!$F1 3847
1 TraesCS3D01G149300 chr3B 166652404 166655354 2950 True 2217.5 4213 95.024 755 3808 2 chr3B.!!$R1 3053
2 TraesCS3D01G149300 chr3A 110069116 110071324 2208 False 3393.0 3393 94.395 659 2873 1 chr3A.!!$F1 2214
3 TraesCS3D01G149300 chr5A 472110684 472112378 1694 False 1823.0 1823 86.185 1039 2727 1 chr5A.!!$F2 1688
4 TraesCS3D01G149300 chr5D 369578054 369579748 1694 False 1773.0 1773 85.630 1039 2727 1 chr5D.!!$F1 1688
5 TraesCS3D01G149300 chr5B 438795347 438797041 1694 False 1724.0 1724 85.118 1039 2727 1 chr5B.!!$F2 1688
6 TraesCS3D01G149300 chr2B 639025803 639027496 1693 True 638.0 638 74.223 1041 2725 1 chr2B.!!$R1 1684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 264 0.035152 ATGCCTTGTCGAAGCCATCA 60.035 50.000 0.00 0.0 0.00 3.07 F
548 549 0.109153 ACTGCATCAGCCAGTTCACA 59.891 50.000 0.00 0.0 41.13 3.58 F
779 780 0.318699 TCGGCGTCACACAGAAGAAG 60.319 55.000 6.85 0.0 0.00 2.85 F
945 962 1.112315 CACTCCCTCCTCCATCTCCG 61.112 65.000 0.00 0.0 0.00 4.63 F
1610 1639 1.433879 GCATACAGACGTCGCTCCT 59.566 57.895 10.46 0.0 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1932 1967 0.528466 CCGTGATCACCGACATGGAG 60.528 60.000 20.03 2.63 43.47 3.86 R
2296 2331 1.658095 GAAGATGAAGAGCGTGCTGAC 59.342 52.381 0.00 0.00 0.00 3.51 R
2777 2815 2.270205 CCGCCTTCTCACCAGCAT 59.730 61.111 0.00 0.00 0.00 3.79 R
2835 2873 1.207329 GGACATCTTTAGCGACCACCT 59.793 52.381 0.00 0.00 0.00 4.00 R
3171 3231 0.461870 ATTGCTCATTACCAGCGCGA 60.462 50.000 12.10 0.00 40.01 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.248640 TCAGGCTCAAAATTTAGTCTCAGG 58.751 41.667 0.00 0.00 0.00 3.86
24 25 4.013050 AGGCTCAAAATTTAGTCTCAGGC 58.987 43.478 0.00 0.00 0.00 4.85
25 26 3.129462 GGCTCAAAATTTAGTCTCAGGCC 59.871 47.826 0.00 0.00 0.00 5.19
26 27 3.129462 GCTCAAAATTTAGTCTCAGGCCC 59.871 47.826 0.00 0.00 0.00 5.80
27 28 3.343617 TCAAAATTTAGTCTCAGGCCCG 58.656 45.455 0.00 0.00 0.00 6.13
28 29 2.420058 AAATTTAGTCTCAGGCCCGG 57.580 50.000 0.00 0.00 0.00 5.73
29 30 0.107165 AATTTAGTCTCAGGCCCGGC 60.107 55.000 0.00 0.00 0.00 6.13
30 31 0.983378 ATTTAGTCTCAGGCCCGGCT 60.983 55.000 9.86 0.00 0.00 5.52
31 32 1.614241 TTTAGTCTCAGGCCCGGCTC 61.614 60.000 9.86 0.00 0.00 4.70
46 47 4.760047 CTCGTGGGCAAGACCGGG 62.760 72.222 6.32 0.00 40.62 5.73
63 64 4.986708 GCTGGGCCGGGTTTTCCA 62.987 66.667 15.62 0.00 42.91 3.53
64 65 2.037208 CTGGGCCGGGTTTTCCAT 59.963 61.111 3.77 0.00 42.91 3.41
65 66 2.283532 TGGGCCGGGTTTTCCATG 60.284 61.111 2.18 0.00 42.91 3.66
66 67 3.074369 GGGCCGGGTTTTCCATGG 61.074 66.667 4.97 4.97 42.91 3.66
69 70 2.283532 CCGGGTTTTCCATGGCCA 60.284 61.111 8.56 8.56 42.91 5.36
70 71 2.350458 CCGGGTTTTCCATGGCCAG 61.350 63.158 13.05 2.90 42.91 4.85
71 72 2.350458 CGGGTTTTCCATGGCCAGG 61.350 63.158 13.05 12.17 42.91 4.45
72 73 1.229177 GGGTTTTCCATGGCCAGGT 60.229 57.895 17.55 0.00 42.91 4.00
73 74 0.040499 GGGTTTTCCATGGCCAGGTA 59.960 55.000 17.55 6.56 42.91 3.08
74 75 1.342975 GGGTTTTCCATGGCCAGGTAT 60.343 52.381 17.55 0.00 42.91 2.73
75 76 2.091555 GGGTTTTCCATGGCCAGGTATA 60.092 50.000 17.55 0.00 42.91 1.47
76 77 3.628769 GGGTTTTCCATGGCCAGGTATAA 60.629 47.826 17.55 4.81 42.91 0.98
77 78 4.223144 GGTTTTCCATGGCCAGGTATAAT 58.777 43.478 17.55 0.00 40.31 1.28
78 79 4.280929 GGTTTTCCATGGCCAGGTATAATC 59.719 45.833 17.55 0.00 40.31 1.75
79 80 5.140454 GTTTTCCATGGCCAGGTATAATCT 58.860 41.667 17.55 0.00 0.00 2.40
80 81 6.303839 GTTTTCCATGGCCAGGTATAATCTA 58.696 40.000 17.55 0.00 0.00 1.98
81 82 5.762179 TTCCATGGCCAGGTATAATCTAG 57.238 43.478 17.55 0.00 0.00 2.43
82 83 5.023514 TCCATGGCCAGGTATAATCTAGA 57.976 43.478 17.55 0.00 0.00 2.43
83 84 4.777896 TCCATGGCCAGGTATAATCTAGAC 59.222 45.833 17.55 0.00 0.00 2.59
84 85 4.532126 CCATGGCCAGGTATAATCTAGACA 59.468 45.833 17.55 0.00 0.00 3.41
85 86 5.190528 CCATGGCCAGGTATAATCTAGACAT 59.809 44.000 17.55 0.00 0.00 3.06
86 87 5.745312 TGGCCAGGTATAATCTAGACATG 57.255 43.478 0.00 0.00 32.13 3.21
87 88 5.155161 TGGCCAGGTATAATCTAGACATGT 58.845 41.667 0.00 0.00 30.54 3.21
88 89 5.606749 TGGCCAGGTATAATCTAGACATGTT 59.393 40.000 0.00 0.00 30.54 2.71
89 90 6.166982 GGCCAGGTATAATCTAGACATGTTC 58.833 44.000 0.00 0.00 30.54 3.18
90 91 6.014156 GGCCAGGTATAATCTAGACATGTTCT 60.014 42.308 0.00 1.27 38.51 3.01
91 92 7.093992 GCCAGGTATAATCTAGACATGTTCTC 58.906 42.308 0.00 0.00 35.55 2.87
92 93 7.039363 GCCAGGTATAATCTAGACATGTTCTCT 60.039 40.741 0.00 0.00 35.55 3.10
93 94 8.865090 CCAGGTATAATCTAGACATGTTCTCTT 58.135 37.037 0.00 0.00 35.55 2.85
121 122 5.824429 TCATTATTTTAGCACTGCATCAGC 58.176 37.500 3.30 0.00 42.57 4.26
122 123 2.838386 ATTTTAGCACTGCATCAGCG 57.162 45.000 3.30 0.00 46.23 5.18
123 124 1.522668 TTTTAGCACTGCATCAGCGT 58.477 45.000 3.30 0.00 46.23 5.07
124 125 0.798159 TTTAGCACTGCATCAGCGTG 59.202 50.000 3.30 0.00 46.23 5.34
127 128 3.260931 CACTGCATCAGCGTGCTT 58.739 55.556 11.91 0.00 45.27 3.91
128 129 1.134075 CACTGCATCAGCGTGCTTC 59.866 57.895 11.91 0.00 45.27 3.86
129 130 1.004080 ACTGCATCAGCGTGCTTCT 60.004 52.632 11.91 0.00 45.27 2.85
130 131 0.247460 ACTGCATCAGCGTGCTTCTA 59.753 50.000 11.91 0.00 45.27 2.10
131 132 0.649475 CTGCATCAGCGTGCTTCTAC 59.351 55.000 11.91 0.00 45.27 2.59
132 133 0.247460 TGCATCAGCGTGCTTCTACT 59.753 50.000 11.91 0.00 45.27 2.57
133 134 0.926846 GCATCAGCGTGCTTCTACTC 59.073 55.000 0.00 0.00 41.82 2.59
134 135 1.470632 GCATCAGCGTGCTTCTACTCT 60.471 52.381 0.00 0.00 41.82 3.24
135 136 2.191802 CATCAGCGTGCTTCTACTCTG 58.808 52.381 0.00 0.00 35.33 3.35
136 137 1.534729 TCAGCGTGCTTCTACTCTGA 58.465 50.000 0.00 0.00 39.37 3.27
137 138 1.200252 TCAGCGTGCTTCTACTCTGAC 59.800 52.381 0.00 0.00 37.46 3.51
138 139 1.068264 CAGCGTGCTTCTACTCTGACA 60.068 52.381 0.00 0.00 35.89 3.58
139 140 1.613925 AGCGTGCTTCTACTCTGACAA 59.386 47.619 0.00 0.00 0.00 3.18
140 141 2.035961 AGCGTGCTTCTACTCTGACAAA 59.964 45.455 0.00 0.00 0.00 2.83
141 142 2.996621 GCGTGCTTCTACTCTGACAAAT 59.003 45.455 0.00 0.00 0.00 2.32
142 143 3.433615 GCGTGCTTCTACTCTGACAAATT 59.566 43.478 0.00 0.00 0.00 1.82
143 144 4.083802 GCGTGCTTCTACTCTGACAAATTT 60.084 41.667 0.00 0.00 0.00 1.82
144 145 5.612865 CGTGCTTCTACTCTGACAAATTTC 58.387 41.667 0.00 0.00 0.00 2.17
145 146 5.406780 CGTGCTTCTACTCTGACAAATTTCT 59.593 40.000 0.00 0.00 0.00 2.52
146 147 6.586463 CGTGCTTCTACTCTGACAAATTTCTA 59.414 38.462 0.00 0.00 0.00 2.10
147 148 7.201393 CGTGCTTCTACTCTGACAAATTTCTAG 60.201 40.741 0.00 0.00 0.00 2.43
148 149 6.591834 TGCTTCTACTCTGACAAATTTCTAGC 59.408 38.462 0.00 0.00 0.00 3.42
149 150 6.816140 GCTTCTACTCTGACAAATTTCTAGCT 59.184 38.462 0.00 0.00 0.00 3.32
150 151 7.201513 GCTTCTACTCTGACAAATTTCTAGCTG 60.202 40.741 0.00 0.00 0.00 4.24
151 152 7.233389 TCTACTCTGACAAATTTCTAGCTGT 57.767 36.000 0.00 0.00 0.00 4.40
152 153 7.316640 TCTACTCTGACAAATTTCTAGCTGTC 58.683 38.462 0.00 0.00 38.91 3.51
153 154 5.241662 ACTCTGACAAATTTCTAGCTGTCC 58.758 41.667 0.00 0.00 37.90 4.02
154 155 5.221722 ACTCTGACAAATTTCTAGCTGTCCA 60.222 40.000 0.00 0.00 37.90 4.02
155 156 5.620206 TCTGACAAATTTCTAGCTGTCCAA 58.380 37.500 0.00 0.00 37.90 3.53
156 157 5.470098 TCTGACAAATTTCTAGCTGTCCAAC 59.530 40.000 0.00 0.00 37.90 3.77
157 158 5.129634 TGACAAATTTCTAGCTGTCCAACA 58.870 37.500 0.00 0.00 37.90 3.33
158 159 5.592282 TGACAAATTTCTAGCTGTCCAACAA 59.408 36.000 0.00 0.00 37.90 2.83
159 160 6.265196 TGACAAATTTCTAGCTGTCCAACAAT 59.735 34.615 0.00 0.00 37.90 2.71
160 161 6.449698 ACAAATTTCTAGCTGTCCAACAATG 58.550 36.000 0.00 0.00 0.00 2.82
186 187 4.290622 CCTGCTGCCCACCCACTT 62.291 66.667 0.00 0.00 0.00 3.16
187 188 2.674380 CTGCTGCCCACCCACTTC 60.674 66.667 0.00 0.00 0.00 3.01
188 189 3.177884 TGCTGCCCACCCACTTCT 61.178 61.111 0.00 0.00 0.00 2.85
189 190 2.674380 GCTGCCCACCCACTTCTG 60.674 66.667 0.00 0.00 0.00 3.02
190 191 3.160585 CTGCCCACCCACTTCTGA 58.839 61.111 0.00 0.00 0.00 3.27
191 192 1.687612 CTGCCCACCCACTTCTGAT 59.312 57.895 0.00 0.00 0.00 2.90
192 193 0.038744 CTGCCCACCCACTTCTGATT 59.961 55.000 0.00 0.00 0.00 2.57
193 194 1.281867 CTGCCCACCCACTTCTGATTA 59.718 52.381 0.00 0.00 0.00 1.75
194 195 1.281867 TGCCCACCCACTTCTGATTAG 59.718 52.381 0.00 0.00 0.00 1.73
195 196 1.282157 GCCCACCCACTTCTGATTAGT 59.718 52.381 0.00 0.00 0.00 2.24
196 197 2.290960 GCCCACCCACTTCTGATTAGTT 60.291 50.000 0.00 0.00 0.00 2.24
197 198 3.814316 GCCCACCCACTTCTGATTAGTTT 60.814 47.826 0.00 0.00 0.00 2.66
198 199 4.407365 CCCACCCACTTCTGATTAGTTTT 58.593 43.478 0.00 0.00 0.00 2.43
199 200 4.459337 CCCACCCACTTCTGATTAGTTTTC 59.541 45.833 0.00 0.00 0.00 2.29
200 201 5.070001 CCACCCACTTCTGATTAGTTTTCA 58.930 41.667 0.00 0.00 0.00 2.69
201 202 5.534654 CCACCCACTTCTGATTAGTTTTCAA 59.465 40.000 0.00 0.00 0.00 2.69
202 203 6.294176 CCACCCACTTCTGATTAGTTTTCAAG 60.294 42.308 0.00 0.00 0.00 3.02
203 204 5.770162 ACCCACTTCTGATTAGTTTTCAAGG 59.230 40.000 0.00 0.00 0.00 3.61
204 205 5.183904 CCCACTTCTGATTAGTTTTCAAGGG 59.816 44.000 0.00 0.00 0.00 3.95
205 206 5.770162 CCACTTCTGATTAGTTTTCAAGGGT 59.230 40.000 0.00 0.00 0.00 4.34
206 207 6.072452 CCACTTCTGATTAGTTTTCAAGGGTC 60.072 42.308 0.00 0.00 0.00 4.46
207 208 6.486657 CACTTCTGATTAGTTTTCAAGGGTCA 59.513 38.462 0.00 0.00 0.00 4.02
208 209 6.712547 ACTTCTGATTAGTTTTCAAGGGTCAG 59.287 38.462 0.00 0.00 34.63 3.51
209 210 6.433847 TCTGATTAGTTTTCAAGGGTCAGA 57.566 37.500 0.00 0.00 38.67 3.27
210 211 6.231211 TCTGATTAGTTTTCAAGGGTCAGAC 58.769 40.000 0.00 0.00 36.78 3.51
211 212 6.043243 TCTGATTAGTTTTCAAGGGTCAGACT 59.957 38.462 0.00 0.00 36.78 3.24
212 213 6.231211 TGATTAGTTTTCAAGGGTCAGACTC 58.769 40.000 0.00 0.00 0.00 3.36
213 214 5.623956 TTAGTTTTCAAGGGTCAGACTCA 57.376 39.130 2.43 0.00 0.00 3.41
214 215 4.503714 AGTTTTCAAGGGTCAGACTCAA 57.496 40.909 2.43 0.00 0.00 3.02
215 216 4.200092 AGTTTTCAAGGGTCAGACTCAAC 58.800 43.478 2.43 0.00 0.00 3.18
216 217 4.080299 AGTTTTCAAGGGTCAGACTCAACT 60.080 41.667 2.43 0.10 0.00 3.16
217 218 3.753294 TTCAAGGGTCAGACTCAACTC 57.247 47.619 2.43 0.00 0.00 3.01
218 219 1.971357 TCAAGGGTCAGACTCAACTCC 59.029 52.381 2.43 0.00 0.00 3.85
219 220 1.002544 CAAGGGTCAGACTCAACTCCC 59.997 57.143 2.43 0.00 35.56 4.30
220 221 0.191064 AGGGTCAGACTCAACTCCCA 59.809 55.000 2.43 0.00 37.56 4.37
221 222 0.321996 GGGTCAGACTCAACTCCCAC 59.678 60.000 0.00 0.00 35.43 4.61
222 223 0.038159 GGTCAGACTCAACTCCCACG 60.038 60.000 0.00 0.00 0.00 4.94
223 224 0.674534 GTCAGACTCAACTCCCACGT 59.325 55.000 0.00 0.00 0.00 4.49
224 225 0.959553 TCAGACTCAACTCCCACGTC 59.040 55.000 0.00 0.00 0.00 4.34
225 226 0.962489 CAGACTCAACTCCCACGTCT 59.038 55.000 0.00 0.00 35.49 4.18
226 227 2.160205 CAGACTCAACTCCCACGTCTA 58.840 52.381 0.00 0.00 33.53 2.59
227 228 2.755655 CAGACTCAACTCCCACGTCTAT 59.244 50.000 0.00 0.00 33.53 1.98
228 229 3.193691 CAGACTCAACTCCCACGTCTATT 59.806 47.826 0.00 0.00 33.53 1.73
229 230 3.833070 AGACTCAACTCCCACGTCTATTT 59.167 43.478 0.00 0.00 33.53 1.40
230 231 5.014858 AGACTCAACTCCCACGTCTATTTA 58.985 41.667 0.00 0.00 33.53 1.40
231 232 5.657302 AGACTCAACTCCCACGTCTATTTAT 59.343 40.000 0.00 0.00 33.53 1.40
232 233 6.154706 AGACTCAACTCCCACGTCTATTTATT 59.845 38.462 0.00 0.00 33.53 1.40
233 234 6.708285 ACTCAACTCCCACGTCTATTTATTT 58.292 36.000 0.00 0.00 0.00 1.40
234 235 6.594159 ACTCAACTCCCACGTCTATTTATTTG 59.406 38.462 0.00 0.00 0.00 2.32
235 236 6.703319 TCAACTCCCACGTCTATTTATTTGA 58.297 36.000 0.00 0.00 0.00 2.69
236 237 7.162761 TCAACTCCCACGTCTATTTATTTGAA 58.837 34.615 0.00 0.00 0.00 2.69
237 238 7.333423 TCAACTCCCACGTCTATTTATTTGAAG 59.667 37.037 0.00 0.00 0.00 3.02
238 239 6.942976 ACTCCCACGTCTATTTATTTGAAGA 58.057 36.000 0.00 0.00 0.00 2.87
239 240 7.391620 ACTCCCACGTCTATTTATTTGAAGAA 58.608 34.615 0.00 0.00 0.00 2.52
240 241 7.881232 ACTCCCACGTCTATTTATTTGAAGAAA 59.119 33.333 0.00 0.00 0.00 2.52
241 242 8.624367 TCCCACGTCTATTTATTTGAAGAAAA 57.376 30.769 0.00 0.00 0.00 2.29
242 243 9.069082 TCCCACGTCTATTTATTTGAAGAAAAA 57.931 29.630 0.00 0.00 0.00 1.94
259 260 2.438868 AAAAATGCCTTGTCGAAGCC 57.561 45.000 0.00 0.00 0.00 4.35
260 261 1.327303 AAAATGCCTTGTCGAAGCCA 58.673 45.000 0.00 0.00 0.00 4.75
261 262 1.549203 AAATGCCTTGTCGAAGCCAT 58.451 45.000 0.00 0.00 0.00 4.40
262 263 1.098050 AATGCCTTGTCGAAGCCATC 58.902 50.000 0.00 0.00 0.00 3.51
263 264 0.035152 ATGCCTTGTCGAAGCCATCA 60.035 50.000 0.00 0.00 0.00 3.07
264 265 0.674581 TGCCTTGTCGAAGCCATCAG 60.675 55.000 0.00 0.00 0.00 2.90
265 266 0.391661 GCCTTGTCGAAGCCATCAGA 60.392 55.000 0.00 0.00 0.00 3.27
266 267 1.649664 CCTTGTCGAAGCCATCAGAG 58.350 55.000 0.00 0.00 0.00 3.35
267 268 1.205655 CCTTGTCGAAGCCATCAGAGA 59.794 52.381 0.00 0.00 0.00 3.10
268 269 2.158986 CCTTGTCGAAGCCATCAGAGAT 60.159 50.000 0.00 0.00 0.00 2.75
269 270 2.879002 TGTCGAAGCCATCAGAGATC 57.121 50.000 0.00 0.00 0.00 2.75
270 271 1.066152 TGTCGAAGCCATCAGAGATCG 59.934 52.381 0.00 0.00 0.00 3.69
271 272 0.670706 TCGAAGCCATCAGAGATCGG 59.329 55.000 0.00 0.00 0.00 4.18
272 273 0.387202 CGAAGCCATCAGAGATCGGT 59.613 55.000 0.00 0.00 0.00 4.69
273 274 1.863267 GAAGCCATCAGAGATCGGTG 58.137 55.000 0.00 0.00 0.00 4.94
274 275 0.179062 AAGCCATCAGAGATCGGTGC 60.179 55.000 0.00 0.00 0.00 5.01
275 276 1.144716 GCCATCAGAGATCGGTGCA 59.855 57.895 0.00 0.00 0.00 4.57
276 277 1.156645 GCCATCAGAGATCGGTGCAC 61.157 60.000 8.80 8.80 0.00 4.57
277 278 0.873312 CCATCAGAGATCGGTGCACG 60.873 60.000 11.45 6.55 46.11 5.34
288 289 4.134187 GTGCACGACACCGATGCG 62.134 66.667 0.00 0.00 44.02 4.73
289 290 4.656117 TGCACGACACCGATGCGT 62.656 61.111 0.00 0.00 41.89 5.24
290 291 3.411351 GCACGACACCGATGCGTT 61.411 61.111 0.00 0.00 36.76 4.84
291 292 2.089936 GCACGACACCGATGCGTTA 61.090 57.895 0.00 0.00 36.76 3.18
292 293 1.619526 GCACGACACCGATGCGTTAA 61.620 55.000 0.00 0.00 36.76 2.01
293 294 0.785378 CACGACACCGATGCGTTAAA 59.215 50.000 0.00 0.00 36.76 1.52
294 295 1.192757 CACGACACCGATGCGTTAAAA 59.807 47.619 0.00 0.00 36.76 1.52
295 296 1.192980 ACGACACCGATGCGTTAAAAC 59.807 47.619 0.00 0.00 35.85 2.43
296 297 1.192757 CGACACCGATGCGTTAAAACA 59.807 47.619 0.00 0.00 38.22 2.83
297 298 2.348685 CGACACCGATGCGTTAAAACAA 60.349 45.455 0.00 0.00 38.22 2.83
298 299 3.619729 GACACCGATGCGTTAAAACAAA 58.380 40.909 0.00 0.00 0.00 2.83
299 300 4.030134 ACACCGATGCGTTAAAACAAAA 57.970 36.364 0.00 0.00 0.00 2.44
300 301 4.421948 ACACCGATGCGTTAAAACAAAAA 58.578 34.783 0.00 0.00 0.00 1.94
301 302 5.044558 ACACCGATGCGTTAAAACAAAAAT 58.955 33.333 0.00 0.00 0.00 1.82
302 303 5.051374 ACACCGATGCGTTAAAACAAAAATG 60.051 36.000 0.00 0.00 0.00 2.32
303 304 4.446051 ACCGATGCGTTAAAACAAAAATGG 59.554 37.500 0.00 0.00 0.00 3.16
304 305 4.381983 CGATGCGTTAAAACAAAAATGGC 58.618 39.130 0.00 0.00 0.00 4.40
305 306 4.084849 CGATGCGTTAAAACAAAAATGGCA 60.085 37.500 0.00 0.00 0.00 4.92
306 307 4.522297 TGCGTTAAAACAAAAATGGCAC 57.478 36.364 0.00 0.00 0.00 5.01
322 323 4.350368 TGGCACATAAGTTCAGTTCAGA 57.650 40.909 0.00 0.00 0.00 3.27
323 324 4.713553 TGGCACATAAGTTCAGTTCAGAA 58.286 39.130 0.00 0.00 0.00 3.02
324 325 4.515191 TGGCACATAAGTTCAGTTCAGAAC 59.485 41.667 5.00 5.00 46.35 3.01
333 334 5.288543 GTTCAGTTCAGAACCATGCTAAG 57.711 43.478 9.85 0.00 41.52 2.18
334 335 4.890158 TCAGTTCAGAACCATGCTAAGA 57.110 40.909 9.85 0.00 0.00 2.10
335 336 4.825422 TCAGTTCAGAACCATGCTAAGAG 58.175 43.478 9.85 0.00 0.00 2.85
336 337 3.373439 CAGTTCAGAACCATGCTAAGAGC 59.627 47.826 9.85 0.00 42.82 4.09
349 350 4.725790 GCTAAGAGCATGGTTCCAAATT 57.274 40.909 0.00 0.00 41.89 1.82
350 351 5.077134 GCTAAGAGCATGGTTCCAAATTT 57.923 39.130 0.00 0.00 41.89 1.82
351 352 6.207691 GCTAAGAGCATGGTTCCAAATTTA 57.792 37.500 0.00 0.00 41.89 1.40
352 353 6.809869 GCTAAGAGCATGGTTCCAAATTTAT 58.190 36.000 0.00 0.00 41.89 1.40
353 354 7.940850 GCTAAGAGCATGGTTCCAAATTTATA 58.059 34.615 0.00 0.00 41.89 0.98
354 355 8.579863 GCTAAGAGCATGGTTCCAAATTTATAT 58.420 33.333 0.00 0.00 41.89 0.86
364 365 9.661954 TGGTTCCAAATTTATATATTTAGGCCA 57.338 29.630 5.01 5.54 0.00 5.36
372 373 8.895141 ATTTATATATTTAGGCCAAAGGTCCC 57.105 34.615 5.01 0.00 0.00 4.46
373 374 7.657352 TTATATATTTAGGCCAAAGGTCCCT 57.343 36.000 5.01 0.00 0.00 4.20
374 375 4.899898 ATATTTAGGCCAAAGGTCCCTT 57.100 40.909 5.01 0.00 37.98 3.95
375 376 3.560357 ATTTAGGCCAAAGGTCCCTTT 57.440 42.857 5.01 5.47 45.98 3.11
376 377 4.685513 ATTTAGGCCAAAGGTCCCTTTA 57.314 40.909 10.86 0.00 43.56 1.85
377 378 3.444792 TTAGGCCAAAGGTCCCTTTAC 57.555 47.619 10.86 6.71 43.56 2.01
378 379 1.154430 AGGCCAAAGGTCCCTTTACA 58.846 50.000 10.86 0.00 43.56 2.41
379 380 1.203013 AGGCCAAAGGTCCCTTTACAC 60.203 52.381 10.86 4.75 43.56 2.90
380 381 1.203013 GGCCAAAGGTCCCTTTACACT 60.203 52.381 10.86 0.00 43.56 3.55
381 382 2.040679 GGCCAAAGGTCCCTTTACACTA 59.959 50.000 10.86 0.00 43.56 2.74
382 383 3.344515 GCCAAAGGTCCCTTTACACTAG 58.655 50.000 10.86 0.00 43.56 2.57
383 384 3.008704 GCCAAAGGTCCCTTTACACTAGA 59.991 47.826 10.86 0.00 43.56 2.43
384 385 4.324331 GCCAAAGGTCCCTTTACACTAGAT 60.324 45.833 10.86 0.00 43.56 1.98
385 386 5.429130 CCAAAGGTCCCTTTACACTAGATC 58.571 45.833 10.86 0.00 43.56 2.75
386 387 5.045869 CCAAAGGTCCCTTTACACTAGATCA 60.046 44.000 10.86 0.00 43.56 2.92
387 388 5.941555 AAGGTCCCTTTACACTAGATCAG 57.058 43.478 0.00 0.00 31.29 2.90
388 389 3.707102 AGGTCCCTTTACACTAGATCAGC 59.293 47.826 0.00 0.00 0.00 4.26
389 390 3.707102 GGTCCCTTTACACTAGATCAGCT 59.293 47.826 0.00 0.00 0.00 4.24
390 391 4.202172 GGTCCCTTTACACTAGATCAGCTC 60.202 50.000 0.00 0.00 0.00 4.09
391 392 4.402793 GTCCCTTTACACTAGATCAGCTCA 59.597 45.833 0.00 0.00 0.00 4.26
392 393 4.402793 TCCCTTTACACTAGATCAGCTCAC 59.597 45.833 0.00 0.00 0.00 3.51
393 394 4.442192 CCCTTTACACTAGATCAGCTCACC 60.442 50.000 0.00 0.00 0.00 4.02
394 395 4.160439 CCTTTACACTAGATCAGCTCACCA 59.840 45.833 0.00 0.00 0.00 4.17
395 396 4.991153 TTACACTAGATCAGCTCACCAG 57.009 45.455 0.00 0.00 0.00 4.00
404 405 4.232310 GCTCACCAGCCCATTCTC 57.768 61.111 0.00 0.00 40.14 2.87
405 406 1.606531 GCTCACCAGCCCATTCTCT 59.393 57.895 0.00 0.00 40.14 3.10
406 407 0.747283 GCTCACCAGCCCATTCTCTG 60.747 60.000 0.00 0.00 40.14 3.35
407 408 0.907486 CTCACCAGCCCATTCTCTGA 59.093 55.000 0.00 0.00 32.26 3.27
408 409 0.615331 TCACCAGCCCATTCTCTGAC 59.385 55.000 0.00 0.00 32.26 3.51
409 410 0.393537 CACCAGCCCATTCTCTGACC 60.394 60.000 0.00 0.00 32.26 4.02
410 411 0.842030 ACCAGCCCATTCTCTGACCA 60.842 55.000 0.00 0.00 32.26 4.02
411 412 0.329261 CCAGCCCATTCTCTGACCAA 59.671 55.000 0.00 0.00 32.26 3.67
412 413 1.064166 CCAGCCCATTCTCTGACCAAT 60.064 52.381 0.00 0.00 32.26 3.16
413 414 2.622452 CCAGCCCATTCTCTGACCAATT 60.622 50.000 0.00 0.00 32.26 2.32
414 415 3.094572 CAGCCCATTCTCTGACCAATTT 58.905 45.455 0.00 0.00 32.26 1.82
415 416 3.129988 CAGCCCATTCTCTGACCAATTTC 59.870 47.826 0.00 0.00 32.26 2.17
416 417 3.011032 AGCCCATTCTCTGACCAATTTCT 59.989 43.478 0.00 0.00 0.00 2.52
417 418 3.379688 GCCCATTCTCTGACCAATTTCTC 59.620 47.826 0.00 0.00 0.00 2.87
418 419 4.853007 CCCATTCTCTGACCAATTTCTCT 58.147 43.478 0.00 0.00 0.00 3.10
419 420 5.630069 GCCCATTCTCTGACCAATTTCTCTA 60.630 44.000 0.00 0.00 0.00 2.43
420 421 6.054295 CCCATTCTCTGACCAATTTCTCTAG 58.946 44.000 0.00 0.00 0.00 2.43
421 422 6.126940 CCCATTCTCTGACCAATTTCTCTAGA 60.127 42.308 0.00 0.00 0.00 2.43
422 423 7.334090 CCATTCTCTGACCAATTTCTCTAGAA 58.666 38.462 0.00 0.00 0.00 2.10
423 424 7.279758 CCATTCTCTGACCAATTTCTCTAGAAC 59.720 40.741 0.00 0.00 33.13 3.01
424 425 6.287589 TCTCTGACCAATTTCTCTAGAACC 57.712 41.667 0.00 0.00 33.13 3.62
425 426 5.780282 TCTCTGACCAATTTCTCTAGAACCA 59.220 40.000 0.00 0.00 33.13 3.67
426 427 6.042638 TCTGACCAATTTCTCTAGAACCAG 57.957 41.667 0.00 0.00 33.13 4.00
427 428 5.046304 TCTGACCAATTTCTCTAGAACCAGG 60.046 44.000 0.00 0.00 33.13 4.45
428 429 3.942115 GACCAATTTCTCTAGAACCAGGC 59.058 47.826 0.00 0.00 33.13 4.85
429 430 3.282885 CCAATTTCTCTAGAACCAGGCC 58.717 50.000 0.00 0.00 33.13 5.19
430 431 3.308402 CCAATTTCTCTAGAACCAGGCCA 60.308 47.826 5.01 0.00 33.13 5.36
431 432 4.530875 CAATTTCTCTAGAACCAGGCCAT 58.469 43.478 5.01 0.00 33.13 4.40
432 433 5.397899 CCAATTTCTCTAGAACCAGGCCATA 60.398 44.000 5.01 0.00 33.13 2.74
433 434 5.975988 ATTTCTCTAGAACCAGGCCATAA 57.024 39.130 5.01 0.00 33.13 1.90
434 435 5.975988 TTTCTCTAGAACCAGGCCATAAT 57.024 39.130 5.01 0.00 33.13 1.28
435 436 7.633018 ATTTCTCTAGAACCAGGCCATAATA 57.367 36.000 5.01 0.00 33.13 0.98
436 437 7.633018 TTTCTCTAGAACCAGGCCATAATAT 57.367 36.000 5.01 0.00 33.13 1.28
437 438 6.611613 TCTCTAGAACCAGGCCATAATATG 57.388 41.667 5.01 0.00 0.00 1.78
438 439 6.084738 TCTCTAGAACCAGGCCATAATATGT 58.915 40.000 5.01 0.00 0.00 2.29
439 440 6.558775 TCTCTAGAACCAGGCCATAATATGTT 59.441 38.462 5.01 0.00 0.00 2.71
440 441 7.733047 TCTCTAGAACCAGGCCATAATATGTTA 59.267 37.037 5.01 0.00 0.00 2.41
441 442 8.449423 TCTAGAACCAGGCCATAATATGTTAT 57.551 34.615 5.01 0.00 0.00 1.89
442 443 8.321353 TCTAGAACCAGGCCATAATATGTTATG 58.679 37.037 13.67 13.67 44.38 1.90
443 444 6.852404 AGAACCAGGCCATAATATGTTATGT 58.148 36.000 17.76 1.37 43.64 2.29
444 445 7.297614 AGAACCAGGCCATAATATGTTATGTT 58.702 34.615 17.76 7.15 43.64 2.71
445 446 8.444783 AGAACCAGGCCATAATATGTTATGTTA 58.555 33.333 17.76 0.00 43.64 2.41
446 447 9.243105 GAACCAGGCCATAATATGTTATGTTAT 57.757 33.333 17.76 3.83 43.64 1.89
447 448 8.579850 ACCAGGCCATAATATGTTATGTTATG 57.420 34.615 17.76 12.97 43.64 1.90
448 449 8.170061 ACCAGGCCATAATATGTTATGTTATGT 58.830 33.333 17.76 8.02 43.64 2.29
449 450 9.023962 CCAGGCCATAATATGTTATGTTATGTT 57.976 33.333 17.76 0.00 43.64 2.71
462 463 9.800433 TGTTATGTTATGTTCTTGCCAATATTG 57.200 29.630 8.58 8.58 0.00 1.90
466 467 8.984891 TGTTATGTTCTTGCCAATATTGAAAG 57.015 30.769 17.23 17.68 0.00 2.62
467 468 7.545265 TGTTATGTTCTTGCCAATATTGAAAGC 59.455 33.333 17.23 11.98 0.00 3.51
468 469 4.819769 TGTTCTTGCCAATATTGAAAGCC 58.180 39.130 17.23 12.62 0.00 4.35
469 470 3.781079 TCTTGCCAATATTGAAAGCCG 57.219 42.857 17.23 6.22 0.00 5.52
470 471 2.159254 TCTTGCCAATATTGAAAGCCGC 60.159 45.455 17.23 10.59 0.00 6.53
471 472 1.180907 TGCCAATATTGAAAGCCGCA 58.819 45.000 17.23 12.99 0.00 5.69
472 473 1.547820 TGCCAATATTGAAAGCCGCAA 59.452 42.857 17.23 0.00 0.00 4.85
473 474 2.028658 TGCCAATATTGAAAGCCGCAAA 60.029 40.909 17.23 0.00 0.00 3.68
474 475 2.348362 GCCAATATTGAAAGCCGCAAAC 59.652 45.455 17.23 0.00 0.00 2.93
475 476 3.583806 CCAATATTGAAAGCCGCAAACA 58.416 40.909 17.23 0.00 0.00 2.83
476 477 3.613737 CCAATATTGAAAGCCGCAAACAG 59.386 43.478 17.23 0.00 0.00 3.16
477 478 4.484236 CAATATTGAAAGCCGCAAACAGA 58.516 39.130 10.04 0.00 0.00 3.41
478 479 4.989279 ATATTGAAAGCCGCAAACAGAT 57.011 36.364 0.00 0.00 0.00 2.90
479 480 3.665745 ATTGAAAGCCGCAAACAGATT 57.334 38.095 0.00 0.00 0.00 2.40
480 481 4.782019 ATTGAAAGCCGCAAACAGATTA 57.218 36.364 0.00 0.00 0.00 1.75
481 482 3.552604 TGAAAGCCGCAAACAGATTAC 57.447 42.857 0.00 0.00 0.00 1.89
482 483 2.881513 TGAAAGCCGCAAACAGATTACA 59.118 40.909 0.00 0.00 0.00 2.41
483 484 3.058293 TGAAAGCCGCAAACAGATTACAG 60.058 43.478 0.00 0.00 0.00 2.74
484 485 1.453155 AGCCGCAAACAGATTACAGG 58.547 50.000 0.00 0.00 0.00 4.00
485 486 0.451783 GCCGCAAACAGATTACAGGG 59.548 55.000 0.00 0.00 0.00 4.45
486 487 0.451783 CCGCAAACAGATTACAGGGC 59.548 55.000 0.00 0.00 0.00 5.19
487 488 1.164411 CGCAAACAGATTACAGGGCA 58.836 50.000 0.00 0.00 0.00 5.36
488 489 1.539388 CGCAAACAGATTACAGGGCAA 59.461 47.619 0.00 0.00 0.00 4.52
489 490 2.414559 CGCAAACAGATTACAGGGCAAG 60.415 50.000 0.00 0.00 0.00 4.01
490 491 2.094545 GCAAACAGATTACAGGGCAAGG 60.095 50.000 0.00 0.00 0.00 3.61
491 492 3.157087 CAAACAGATTACAGGGCAAGGT 58.843 45.455 0.00 0.00 0.00 3.50
492 493 2.789409 ACAGATTACAGGGCAAGGTC 57.211 50.000 0.00 0.00 0.00 3.85
493 494 1.985159 ACAGATTACAGGGCAAGGTCA 59.015 47.619 0.00 0.00 0.00 4.02
494 495 2.578021 ACAGATTACAGGGCAAGGTCAT 59.422 45.455 0.00 0.00 0.00 3.06
495 496 2.947652 CAGATTACAGGGCAAGGTCATG 59.052 50.000 0.00 0.00 0.00 3.07
496 497 1.678101 GATTACAGGGCAAGGTCATGC 59.322 52.381 0.00 0.00 45.67 4.06
502 503 3.690745 GCAAGGTCATGCCAGCTT 58.309 55.556 8.58 1.53 40.49 3.74
503 504 2.872408 GCAAGGTCATGCCAGCTTA 58.128 52.632 8.58 0.00 40.49 3.09
504 505 1.176527 GCAAGGTCATGCCAGCTTAA 58.823 50.000 8.58 0.00 40.49 1.85
505 506 1.753073 GCAAGGTCATGCCAGCTTAAT 59.247 47.619 8.58 0.00 40.49 1.40
506 507 2.480759 GCAAGGTCATGCCAGCTTAATG 60.481 50.000 8.58 0.00 40.49 1.90
507 508 2.756760 CAAGGTCATGCCAGCTTAATGT 59.243 45.455 8.58 0.00 40.61 2.71
508 509 3.931907 AGGTCATGCCAGCTTAATGTA 57.068 42.857 8.58 0.00 40.61 2.29
509 510 4.235079 AGGTCATGCCAGCTTAATGTAA 57.765 40.909 8.58 0.00 40.61 2.41
510 511 4.599041 AGGTCATGCCAGCTTAATGTAAA 58.401 39.130 8.58 0.00 40.61 2.01
511 512 4.399303 AGGTCATGCCAGCTTAATGTAAAC 59.601 41.667 8.58 0.00 40.61 2.01
512 513 4.399303 GGTCATGCCAGCTTAATGTAAACT 59.601 41.667 1.78 0.00 37.17 2.66
513 514 5.105756 GGTCATGCCAGCTTAATGTAAACTT 60.106 40.000 1.78 0.00 37.17 2.66
514 515 5.801947 GTCATGCCAGCTTAATGTAAACTTG 59.198 40.000 0.00 0.00 0.00 3.16
515 516 4.173036 TGCCAGCTTAATGTAAACTTGC 57.827 40.909 0.00 0.00 0.00 4.01
516 517 3.826157 TGCCAGCTTAATGTAAACTTGCT 59.174 39.130 0.00 0.00 0.00 3.91
517 518 4.280677 TGCCAGCTTAATGTAAACTTGCTT 59.719 37.500 0.00 0.00 0.00 3.91
518 519 4.859245 GCCAGCTTAATGTAAACTTGCTTC 59.141 41.667 0.00 0.00 0.00 3.86
519 520 5.402398 CCAGCTTAATGTAAACTTGCTTCC 58.598 41.667 0.00 0.00 0.00 3.46
520 521 5.048083 CCAGCTTAATGTAAACTTGCTTCCA 60.048 40.000 0.00 0.00 0.00 3.53
521 522 6.446318 CAGCTTAATGTAAACTTGCTTCCAA 58.554 36.000 0.00 0.00 0.00 3.53
522 523 7.092716 CAGCTTAATGTAAACTTGCTTCCAAT 58.907 34.615 0.00 0.00 0.00 3.16
523 524 7.062605 CAGCTTAATGTAAACTTGCTTCCAATG 59.937 37.037 0.00 0.00 0.00 2.82
524 525 6.868339 GCTTAATGTAAACTTGCTTCCAATGT 59.132 34.615 0.00 0.00 0.00 2.71
525 526 7.148755 GCTTAATGTAAACTTGCTTCCAATGTG 60.149 37.037 0.00 0.00 0.00 3.21
526 527 5.789643 ATGTAAACTTGCTTCCAATGTGT 57.210 34.783 0.00 0.00 0.00 3.72
527 528 4.930963 TGTAAACTTGCTTCCAATGTGTG 58.069 39.130 0.00 0.00 0.00 3.82
528 529 2.514205 AACTTGCTTCCAATGTGTGC 57.486 45.000 0.00 0.00 0.00 4.57
529 530 1.401761 ACTTGCTTCCAATGTGTGCA 58.598 45.000 0.00 0.00 0.00 4.57
530 531 1.067516 ACTTGCTTCCAATGTGTGCAC 59.932 47.619 10.75 10.75 33.13 4.57
531 532 1.338973 CTTGCTTCCAATGTGTGCACT 59.661 47.619 19.41 0.00 33.13 4.40
532 533 0.669619 TGCTTCCAATGTGTGCACTG 59.330 50.000 19.41 7.65 0.00 3.66
533 534 0.665369 GCTTCCAATGTGTGCACTGC 60.665 55.000 19.41 11.49 0.00 4.40
534 535 0.669619 CTTCCAATGTGTGCACTGCA 59.330 50.000 19.41 16.84 35.60 4.41
535 536 1.271379 CTTCCAATGTGTGCACTGCAT 59.729 47.619 19.41 18.29 41.91 3.96
536 537 0.883153 TCCAATGTGTGCACTGCATC 59.117 50.000 19.41 4.75 41.91 3.91
537 538 0.599060 CCAATGTGTGCACTGCATCA 59.401 50.000 19.41 10.23 41.91 3.07
538 539 1.402325 CCAATGTGTGCACTGCATCAG 60.402 52.381 19.41 16.04 41.91 2.90
539 540 0.242825 AATGTGTGCACTGCATCAGC 59.757 50.000 19.41 0.00 41.91 4.26
540 541 1.592400 ATGTGTGCACTGCATCAGCC 61.592 55.000 19.41 0.00 41.91 4.85
541 542 2.113562 TGTGCACTGCATCAGCCA 59.886 55.556 19.41 0.00 41.91 4.75
542 543 1.969589 TGTGCACTGCATCAGCCAG 60.970 57.895 19.41 0.00 41.91 4.85
543 544 1.970114 GTGCACTGCATCAGCCAGT 60.970 57.895 10.32 0.00 41.91 4.00
544 545 1.228337 TGCACTGCATCAGCCAGTT 60.228 52.632 0.00 0.00 41.13 3.16
545 546 1.239296 TGCACTGCATCAGCCAGTTC 61.239 55.000 0.00 0.00 41.13 3.01
546 547 1.239296 GCACTGCATCAGCCAGTTCA 61.239 55.000 0.00 0.00 41.13 3.18
547 548 0.520404 CACTGCATCAGCCAGTTCAC 59.480 55.000 0.00 0.00 41.13 3.18
548 549 0.109153 ACTGCATCAGCCAGTTCACA 59.891 50.000 0.00 0.00 41.13 3.58
549 550 1.271762 ACTGCATCAGCCAGTTCACAT 60.272 47.619 0.00 0.00 41.13 3.21
550 551 1.400846 CTGCATCAGCCAGTTCACATC 59.599 52.381 0.00 0.00 41.13 3.06
551 552 1.271488 TGCATCAGCCAGTTCACATCA 60.271 47.619 0.00 0.00 41.13 3.07
552 553 2.022195 GCATCAGCCAGTTCACATCAT 58.978 47.619 0.00 0.00 33.58 2.45
553 554 2.033049 GCATCAGCCAGTTCACATCATC 59.967 50.000 0.00 0.00 33.58 2.92
554 555 3.275999 CATCAGCCAGTTCACATCATCA 58.724 45.455 0.00 0.00 0.00 3.07
555 556 2.703416 TCAGCCAGTTCACATCATCAC 58.297 47.619 0.00 0.00 0.00 3.06
556 557 2.038820 TCAGCCAGTTCACATCATCACA 59.961 45.455 0.00 0.00 0.00 3.58
557 558 2.161012 CAGCCAGTTCACATCATCACAC 59.839 50.000 0.00 0.00 0.00 3.82
558 559 1.129251 GCCAGTTCACATCATCACACG 59.871 52.381 0.00 0.00 0.00 4.49
559 560 2.416747 CCAGTTCACATCATCACACGT 58.583 47.619 0.00 0.00 0.00 4.49
560 561 2.413112 CCAGTTCACATCATCACACGTC 59.587 50.000 0.00 0.00 0.00 4.34
561 562 3.059166 CAGTTCACATCATCACACGTCA 58.941 45.455 0.00 0.00 0.00 4.35
562 563 3.494251 CAGTTCACATCATCACACGTCAA 59.506 43.478 0.00 0.00 0.00 3.18
563 564 4.024977 CAGTTCACATCATCACACGTCAAA 60.025 41.667 0.00 0.00 0.00 2.69
564 565 4.574421 AGTTCACATCATCACACGTCAAAA 59.426 37.500 0.00 0.00 0.00 2.44
565 566 4.730600 TCACATCATCACACGTCAAAAG 57.269 40.909 0.00 0.00 0.00 2.27
566 567 3.498018 TCACATCATCACACGTCAAAAGG 59.502 43.478 0.00 0.00 0.00 3.11
567 568 2.813754 ACATCATCACACGTCAAAAGGG 59.186 45.455 0.00 0.00 0.00 3.95
568 569 2.920724 TCATCACACGTCAAAAGGGA 57.079 45.000 0.00 0.00 0.00 4.20
569 570 2.766313 TCATCACACGTCAAAAGGGAG 58.234 47.619 0.00 0.00 0.00 4.30
570 571 2.367241 TCATCACACGTCAAAAGGGAGA 59.633 45.455 0.00 0.00 0.00 3.71
571 572 2.526304 TCACACGTCAAAAGGGAGAG 57.474 50.000 0.00 0.00 0.00 3.20
572 573 2.036387 TCACACGTCAAAAGGGAGAGA 58.964 47.619 0.00 0.00 0.00 3.10
573 574 2.035961 TCACACGTCAAAAGGGAGAGAG 59.964 50.000 0.00 0.00 0.00 3.20
574 575 1.270358 ACACGTCAAAAGGGAGAGAGC 60.270 52.381 0.00 0.00 0.00 4.09
575 576 1.001406 CACGTCAAAAGGGAGAGAGCT 59.999 52.381 0.00 0.00 0.00 4.09
576 577 1.273886 ACGTCAAAAGGGAGAGAGCTC 59.726 52.381 5.27 5.27 40.54 4.09
577 578 1.734047 CGTCAAAAGGGAGAGAGCTCG 60.734 57.143 8.37 0.00 42.25 5.03
578 579 1.546476 GTCAAAAGGGAGAGAGCTCGA 59.454 52.381 8.37 0.00 42.25 4.04
579 580 2.028930 GTCAAAAGGGAGAGAGCTCGAA 60.029 50.000 8.37 0.00 42.25 3.71
580 581 2.632996 TCAAAAGGGAGAGAGCTCGAAA 59.367 45.455 8.37 0.00 42.25 3.46
581 582 2.999355 CAAAAGGGAGAGAGCTCGAAAG 59.001 50.000 8.37 0.00 42.25 2.62
582 583 2.223803 AAGGGAGAGAGCTCGAAAGA 57.776 50.000 8.37 0.00 42.25 2.52
595 596 3.516981 TCGAAAGAGAAGGAGATGCAG 57.483 47.619 0.00 0.00 34.84 4.41
596 597 3.092301 TCGAAAGAGAAGGAGATGCAGA 58.908 45.455 0.00 0.00 34.84 4.26
597 598 3.511540 TCGAAAGAGAAGGAGATGCAGAA 59.488 43.478 0.00 0.00 34.84 3.02
598 599 3.864583 CGAAAGAGAAGGAGATGCAGAAG 59.135 47.826 0.00 0.00 0.00 2.85
599 600 2.985957 AGAGAAGGAGATGCAGAAGC 57.014 50.000 0.00 0.00 42.57 3.86
609 610 3.194719 GCAGAAGCAGGCCACATC 58.805 61.111 5.01 0.00 41.58 3.06
610 611 1.676635 GCAGAAGCAGGCCACATCA 60.677 57.895 5.01 0.00 41.58 3.07
611 612 1.246056 GCAGAAGCAGGCCACATCAA 61.246 55.000 5.01 0.00 41.58 2.57
612 613 1.471119 CAGAAGCAGGCCACATCAAT 58.529 50.000 5.01 0.00 0.00 2.57
613 614 1.822990 CAGAAGCAGGCCACATCAATT 59.177 47.619 5.01 0.00 0.00 2.32
614 615 1.822990 AGAAGCAGGCCACATCAATTG 59.177 47.619 5.01 0.00 0.00 2.32
615 616 1.820519 GAAGCAGGCCACATCAATTGA 59.179 47.619 11.26 11.26 0.00 2.57
616 617 1.471119 AGCAGGCCACATCAATTGAG 58.529 50.000 14.54 8.57 0.00 3.02
617 618 1.005097 AGCAGGCCACATCAATTGAGA 59.995 47.619 14.54 0.00 0.00 3.27
618 619 2.029623 GCAGGCCACATCAATTGAGAT 58.970 47.619 14.54 1.21 0.00 2.75
619 620 2.429610 GCAGGCCACATCAATTGAGATT 59.570 45.455 14.54 0.00 0.00 2.40
620 621 3.118884 GCAGGCCACATCAATTGAGATTT 60.119 43.478 14.54 0.00 0.00 2.17
621 622 4.679662 CAGGCCACATCAATTGAGATTTC 58.320 43.478 14.54 3.14 0.00 2.17
622 623 4.158949 CAGGCCACATCAATTGAGATTTCA 59.841 41.667 14.54 0.00 0.00 2.69
623 624 4.401519 AGGCCACATCAATTGAGATTTCAG 59.598 41.667 14.54 0.40 34.15 3.02
624 625 4.400251 GGCCACATCAATTGAGATTTCAGA 59.600 41.667 14.54 0.00 34.15 3.27
625 626 5.338365 GCCACATCAATTGAGATTTCAGAC 58.662 41.667 14.54 0.00 34.15 3.51
626 627 5.106038 GCCACATCAATTGAGATTTCAGACA 60.106 40.000 14.54 0.00 34.15 3.41
627 628 6.405508 GCCACATCAATTGAGATTTCAGACAT 60.406 38.462 14.54 0.00 34.15 3.06
628 629 7.194278 CCACATCAATTGAGATTTCAGACATC 58.806 38.462 14.54 0.00 34.15 3.06
629 630 7.194278 CACATCAATTGAGATTTCAGACATCC 58.806 38.462 14.54 0.00 34.15 3.51
630 631 6.320672 ACATCAATTGAGATTTCAGACATCCC 59.679 38.462 14.54 0.00 34.15 3.85
631 632 5.818887 TCAATTGAGATTTCAGACATCCCA 58.181 37.500 3.38 0.00 34.15 4.37
632 633 6.247676 TCAATTGAGATTTCAGACATCCCAA 58.752 36.000 3.38 0.00 34.15 4.12
633 634 6.151648 TCAATTGAGATTTCAGACATCCCAAC 59.848 38.462 3.38 0.00 34.15 3.77
634 635 4.916041 TGAGATTTCAGACATCCCAACT 57.084 40.909 0.00 0.00 0.00 3.16
635 636 4.836825 TGAGATTTCAGACATCCCAACTC 58.163 43.478 0.00 0.00 0.00 3.01
636 637 4.533707 TGAGATTTCAGACATCCCAACTCT 59.466 41.667 0.00 0.00 0.00 3.24
637 638 5.096443 AGATTTCAGACATCCCAACTCTC 57.904 43.478 0.00 0.00 0.00 3.20
638 639 4.782156 AGATTTCAGACATCCCAACTCTCT 59.218 41.667 0.00 0.00 0.00 3.10
639 640 5.960811 AGATTTCAGACATCCCAACTCTCTA 59.039 40.000 0.00 0.00 0.00 2.43
640 641 6.614906 AGATTTCAGACATCCCAACTCTCTAT 59.385 38.462 0.00 0.00 0.00 1.98
641 642 5.604758 TTCAGACATCCCAACTCTCTATG 57.395 43.478 0.00 0.00 0.00 2.23
642 643 4.871822 TCAGACATCCCAACTCTCTATGA 58.128 43.478 0.00 0.00 0.00 2.15
643 644 5.272402 TCAGACATCCCAACTCTCTATGAA 58.728 41.667 0.00 0.00 0.00 2.57
644 645 5.127845 TCAGACATCCCAACTCTCTATGAAC 59.872 44.000 0.00 0.00 0.00 3.18
645 646 5.128499 CAGACATCCCAACTCTCTATGAACT 59.872 44.000 0.00 0.00 0.00 3.01
646 647 5.723887 AGACATCCCAACTCTCTATGAACTT 59.276 40.000 0.00 0.00 0.00 2.66
647 648 5.983540 ACATCCCAACTCTCTATGAACTTC 58.016 41.667 0.00 0.00 0.00 3.01
648 649 5.723887 ACATCCCAACTCTCTATGAACTTCT 59.276 40.000 0.00 0.00 0.00 2.85
649 650 5.923733 TCCCAACTCTCTATGAACTTCTC 57.076 43.478 0.00 0.00 0.00 2.87
650 651 5.584913 TCCCAACTCTCTATGAACTTCTCT 58.415 41.667 0.00 0.00 0.00 3.10
651 652 5.654650 TCCCAACTCTCTATGAACTTCTCTC 59.345 44.000 0.00 0.00 0.00 3.20
652 653 5.163457 CCCAACTCTCTATGAACTTCTCTCC 60.163 48.000 0.00 0.00 0.00 3.71
653 654 5.420421 CCAACTCTCTATGAACTTCTCTCCA 59.580 44.000 0.00 0.00 0.00 3.86
654 655 6.329496 CAACTCTCTATGAACTTCTCTCCAC 58.671 44.000 0.00 0.00 0.00 4.02
655 656 5.826643 ACTCTCTATGAACTTCTCTCCACT 58.173 41.667 0.00 0.00 0.00 4.00
656 657 6.252995 ACTCTCTATGAACTTCTCTCCACTT 58.747 40.000 0.00 0.00 0.00 3.16
657 658 6.377146 ACTCTCTATGAACTTCTCTCCACTTC 59.623 42.308 0.00 0.00 0.00 3.01
658 659 5.654650 TCTCTATGAACTTCTCTCCACTTCC 59.345 44.000 0.00 0.00 0.00 3.46
659 660 5.584913 TCTATGAACTTCTCTCCACTTCCT 58.415 41.667 0.00 0.00 0.00 3.36
660 661 6.019748 TCTATGAACTTCTCTCCACTTCCTT 58.980 40.000 0.00 0.00 0.00 3.36
661 662 4.608948 TGAACTTCTCTCCACTTCCTTC 57.391 45.455 0.00 0.00 0.00 3.46
662 663 3.325135 TGAACTTCTCTCCACTTCCTTCC 59.675 47.826 0.00 0.00 0.00 3.46
663 664 3.268034 ACTTCTCTCCACTTCCTTCCT 57.732 47.619 0.00 0.00 0.00 3.36
664 665 4.405756 ACTTCTCTCCACTTCCTTCCTA 57.594 45.455 0.00 0.00 0.00 2.94
665 666 4.090819 ACTTCTCTCCACTTCCTTCCTAC 58.909 47.826 0.00 0.00 0.00 3.18
666 667 3.827817 TCTCTCCACTTCCTTCCTACA 57.172 47.619 0.00 0.00 0.00 2.74
675 676 3.055312 ACTTCCTTCCTACAAACGGATCC 60.055 47.826 0.00 0.00 0.00 3.36
680 681 5.057149 CCTTCCTACAAACGGATCCTATTG 58.943 45.833 19.34 19.34 0.00 1.90
681 682 4.067972 TCCTACAAACGGATCCTATTGC 57.932 45.455 20.35 0.00 0.00 3.56
684 685 4.273480 CCTACAAACGGATCCTATTGCTTG 59.727 45.833 20.35 11.07 0.00 4.01
686 687 2.418368 AACGGATCCTATTGCTTGCA 57.582 45.000 10.75 0.00 0.00 4.08
689 690 2.434336 ACGGATCCTATTGCTTGCAGTA 59.566 45.455 10.75 0.00 0.00 2.74
697 698 5.296780 TCCTATTGCTTGCAGTAAGTATTGC 59.703 40.000 0.00 0.00 38.70 3.56
709 710 8.710551 TGCAGTAAGTATTGCAAAATGAAAATG 58.289 29.630 1.71 0.00 44.30 2.32
721 722 3.530265 ATGAAAATGCAATGCGTCCAT 57.470 38.095 0.00 2.50 0.00 3.41
722 723 2.878580 TGAAAATGCAATGCGTCCATC 58.121 42.857 0.00 0.46 0.00 3.51
734 735 1.081892 CGTCCATCCAGAAGCAACAG 58.918 55.000 0.00 0.00 0.00 3.16
737 738 0.674581 CCATCCAGAAGCAACAGCGA 60.675 55.000 0.00 0.00 0.00 4.93
775 776 2.355837 GCTCGGCGTCACACAGAA 60.356 61.111 6.85 0.00 0.00 3.02
779 780 0.318699 TCGGCGTCACACAGAAGAAG 60.319 55.000 6.85 0.00 0.00 2.85
853 869 4.272748 GCAAGACTACAAAGGAAGACGTTT 59.727 41.667 0.00 0.00 35.00 3.60
905 922 2.288457 CCACATATCTACACGGCTGGAG 60.288 54.545 0.00 0.00 0.00 3.86
945 962 1.112315 CACTCCCTCCTCCATCTCCG 61.112 65.000 0.00 0.00 0.00 4.63
1356 1382 3.842923 CCCGCCATCGTGCTCTCT 61.843 66.667 0.00 0.00 0.00 3.10
1609 1638 1.939785 CGCATACAGACGTCGCTCC 60.940 63.158 10.46 0.00 0.00 4.70
1610 1639 1.433879 GCATACAGACGTCGCTCCT 59.566 57.895 10.46 0.00 0.00 3.69
1804 1839 3.309436 CTGACCCCGTTCATGCCGA 62.309 63.158 6.23 0.00 0.00 5.54
2296 2331 2.757508 TCTCCAGCCTGCTCTCCG 60.758 66.667 0.00 0.00 0.00 4.63
2334 2369 1.824760 CATGATGATGGCCACCGCA 60.825 57.895 8.16 7.53 36.38 5.69
2524 2562 2.728817 GGACGCTCGGTATCCAGG 59.271 66.667 0.00 0.00 32.35 4.45
2777 2815 4.812814 CGACACCGCTGATGATGA 57.187 55.556 0.00 0.00 0.00 2.92
2835 2873 3.075005 AAGGCTAGCGCGGGAGAA 61.075 61.111 8.83 0.00 36.88 2.87
2897 2936 2.435938 CATGCGTGGCCGGTAGTT 60.436 61.111 1.90 0.00 33.68 2.24
2908 2947 3.382546 TGGCCGGTAGTTAGTAATCACTC 59.617 47.826 1.90 0.00 36.14 3.51
2985 3024 7.741785 TGGGAGAAGACTTTTTATCTACACAA 58.258 34.615 0.00 0.00 0.00 3.33
3010 3070 8.506168 AAGTCTTGATCTTTGTTTTGTACTCA 57.494 30.769 0.00 0.00 0.00 3.41
3110 3170 5.334319 TGCATATTTCACTCATTTTGCTCG 58.666 37.500 0.00 0.00 0.00 5.03
3117 3177 0.179215 CTCATTTTGCTCGTCCGCAC 60.179 55.000 0.00 0.00 40.09 5.34
3118 3178 0.602638 TCATTTTGCTCGTCCGCACT 60.603 50.000 0.00 0.00 40.09 4.40
3127 3187 1.134367 CTCGTCCGCACTGAAATCCTA 59.866 52.381 0.00 0.00 0.00 2.94
3170 3230 2.939103 GGAGGAAGTGATGTACATGTGC 59.061 50.000 14.43 8.01 0.00 4.57
3171 3231 3.369892 GGAGGAAGTGATGTACATGTGCT 60.370 47.826 14.43 6.15 0.00 4.40
3234 3294 8.891671 ATCTGAAAACTTGTTATTTGTGCAAT 57.108 26.923 0.00 0.00 0.00 3.56
3290 3350 4.320494 GCGTGCAATATATTTGAAGGGAGG 60.320 45.833 0.00 0.00 0.00 4.30
3299 3359 9.525826 AATATATTTGAAGGGAGGCTCTATTTG 57.474 33.333 15.23 0.00 0.00 2.32
3346 3406 6.907212 GCATCAGTCACTTTTTATATGAACCG 59.093 38.462 0.00 0.00 0.00 4.44
3360 3420 1.136305 TGAACCGTCGGATCTTGATCC 59.864 52.381 20.51 17.30 37.36 3.36
3367 3427 4.814234 CCGTCGGATCTTGATCCAAAATAA 59.186 41.667 24.23 4.75 40.75 1.40
3372 3432 6.765989 TCGGATCTTGATCCAAAATAAATCGT 59.234 34.615 24.23 0.00 40.75 3.73
3374 3434 7.467267 CGGATCTTGATCCAAAATAAATCGTGT 60.467 37.037 24.23 0.00 40.75 4.49
3394 3454 4.989168 GTGTTACTGTTCATCGTCTTCCTT 59.011 41.667 0.00 0.00 0.00 3.36
3422 3482 0.598680 CTCATCCTCATCCCGAACGC 60.599 60.000 0.00 0.00 0.00 4.84
3443 3503 2.147387 CAGCCTACCCCGCCCTAAT 61.147 63.158 0.00 0.00 0.00 1.73
3453 3513 4.990553 GCCCTAATCGCCGGCCTC 62.991 72.222 23.46 0.00 36.63 4.70
3690 3750 1.766461 CCATCCCTCTAAGCCCGGT 60.766 63.158 0.00 0.00 0.00 5.28
3692 3752 2.444256 ATCCCTCTAAGCCCGGTGC 61.444 63.158 0.00 3.33 41.71 5.01
3727 3787 0.680921 CCGGTGATCCCTTGCAACAT 60.681 55.000 0.00 0.00 0.00 2.71
3743 3803 3.391296 GCAACATCCACCCCTAAGATAGA 59.609 47.826 0.00 0.00 0.00 1.98
3744 3804 4.042187 GCAACATCCACCCCTAAGATAGAT 59.958 45.833 0.00 0.00 0.00 1.98
3745 3805 5.248477 GCAACATCCACCCCTAAGATAGATA 59.752 44.000 0.00 0.00 0.00 1.98
3808 3868 0.247736 TCTTCTCCGGCAAGCTTCTC 59.752 55.000 0.00 0.00 0.00 2.87
3809 3869 0.742635 CTTCTCCGGCAAGCTTCTCC 60.743 60.000 0.00 0.00 0.00 3.71
3810 3870 1.480212 TTCTCCGGCAAGCTTCTCCA 61.480 55.000 13.11 0.00 0.00 3.86
3811 3871 1.449246 CTCCGGCAAGCTTCTCCAG 60.449 63.158 13.11 3.75 0.00 3.86
3812 3872 2.177594 CTCCGGCAAGCTTCTCCAGT 62.178 60.000 13.11 0.00 0.00 4.00
3813 3873 2.037136 CCGGCAAGCTTCTCCAGTG 61.037 63.158 13.11 0.00 0.00 3.66
3814 3874 1.004560 CGGCAAGCTTCTCCAGTGA 60.005 57.895 13.11 0.00 0.00 3.41
3815 3875 1.018226 CGGCAAGCTTCTCCAGTGAG 61.018 60.000 13.11 0.00 40.17 3.51
3816 3876 0.676151 GGCAAGCTTCTCCAGTGAGG 60.676 60.000 0.00 0.00 39.23 3.86
3817 3877 0.036022 GCAAGCTTCTCCAGTGAGGT 59.964 55.000 0.00 0.00 39.23 3.85
3818 3878 1.943507 GCAAGCTTCTCCAGTGAGGTC 60.944 57.143 0.00 0.00 39.23 3.85
3819 3879 0.980423 AAGCTTCTCCAGTGAGGTCC 59.020 55.000 0.00 0.00 39.23 4.46
3820 3880 0.178921 AGCTTCTCCAGTGAGGTCCA 60.179 55.000 0.00 0.00 39.23 4.02
3821 3881 0.908198 GCTTCTCCAGTGAGGTCCAT 59.092 55.000 0.00 0.00 39.23 3.41
3822 3882 1.134551 GCTTCTCCAGTGAGGTCCATC 60.135 57.143 0.00 0.00 39.23 3.51
3823 3883 1.484240 CTTCTCCAGTGAGGTCCATCC 59.516 57.143 0.00 0.00 39.23 3.51
3824 3884 0.413434 TCTCCAGTGAGGTCCATCCA 59.587 55.000 0.00 0.00 39.23 3.41
3825 3885 1.203300 TCTCCAGTGAGGTCCATCCAA 60.203 52.381 0.00 0.00 39.23 3.53
3826 3886 1.842562 CTCCAGTGAGGTCCATCCAAT 59.157 52.381 0.00 0.00 39.02 3.16
3827 3887 3.041211 CTCCAGTGAGGTCCATCCAATA 58.959 50.000 0.00 0.00 39.02 1.90
3828 3888 3.041211 TCCAGTGAGGTCCATCCAATAG 58.959 50.000 0.00 0.00 39.02 1.73
3829 3889 2.105477 CCAGTGAGGTCCATCCAATAGG 59.895 54.545 0.00 0.00 39.02 2.57
3830 3890 2.105477 CAGTGAGGTCCATCCAATAGGG 59.895 54.545 0.00 0.00 39.02 3.53
3842 3902 4.088634 TCCAATAGGGAAGGAAGAAGGA 57.911 45.455 0.00 0.00 44.80 3.36
3843 3903 4.444611 TCCAATAGGGAAGGAAGAAGGAA 58.555 43.478 0.00 0.00 44.80 3.36
3844 3904 4.855599 TCCAATAGGGAAGGAAGAAGGAAA 59.144 41.667 0.00 0.00 44.80 3.13
3845 3905 5.314841 TCCAATAGGGAAGGAAGAAGGAAAA 59.685 40.000 0.00 0.00 44.80 2.29
3846 3906 6.016555 CCAATAGGGAAGGAAGAAGGAAAAA 58.983 40.000 0.00 0.00 40.01 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.248640 CCTGAGACTAAATTTTGAGCCTGA 58.751 41.667 6.63 0.00 0.00 3.86
1 2 4.142513 GCCTGAGACTAAATTTTGAGCCTG 60.143 45.833 6.63 0.17 0.00 4.85
2 3 4.013050 GCCTGAGACTAAATTTTGAGCCT 58.987 43.478 6.63 0.00 0.00 4.58
3 4 3.129462 GGCCTGAGACTAAATTTTGAGCC 59.871 47.826 6.63 5.15 0.00 4.70
6 7 3.343617 CGGGCCTGAGACTAAATTTTGA 58.656 45.455 5.28 0.00 0.00 2.69
8 9 2.723273 CCGGGCCTGAGACTAAATTTT 58.277 47.619 15.09 0.00 0.00 1.82
9 10 1.682087 GCCGGGCCTGAGACTAAATTT 60.682 52.381 15.09 0.00 0.00 1.82
10 11 0.107165 GCCGGGCCTGAGACTAAATT 60.107 55.000 15.09 0.00 0.00 1.82
11 12 0.983378 AGCCGGGCCTGAGACTAAAT 60.983 55.000 17.02 0.00 0.00 1.40
12 13 1.612442 AGCCGGGCCTGAGACTAAA 60.612 57.895 17.02 0.00 0.00 1.85
13 14 2.038975 AGCCGGGCCTGAGACTAA 59.961 61.111 17.02 0.00 0.00 2.24
14 15 2.442272 GAGCCGGGCCTGAGACTA 60.442 66.667 17.02 0.00 0.00 2.59
29 30 4.760047 CCCGGTCTTGCCCACGAG 62.760 72.222 0.00 0.00 0.00 4.18
46 47 4.986708 TGGAAAACCCGGCCCAGC 62.987 66.667 0.00 0.00 37.93 4.85
47 48 2.037208 ATGGAAAACCCGGCCCAG 59.963 61.111 0.00 0.00 37.93 4.45
48 49 2.283532 CATGGAAAACCCGGCCCA 60.284 61.111 0.00 0.00 37.93 5.36
49 50 3.074369 CCATGGAAAACCCGGCCC 61.074 66.667 5.56 0.00 37.93 5.80
50 51 3.770040 GCCATGGAAAACCCGGCC 61.770 66.667 18.40 0.00 35.96 6.13
51 52 3.770040 GGCCATGGAAAACCCGGC 61.770 66.667 18.40 0.00 39.78 6.13
52 53 2.283532 TGGCCATGGAAAACCCGG 60.284 61.111 18.40 0.00 37.93 5.73
53 54 2.350458 CCTGGCCATGGAAAACCCG 61.350 63.158 18.40 3.07 37.93 5.28
54 55 0.040499 TACCTGGCCATGGAAAACCC 59.960 55.000 23.24 7.22 0.00 4.11
55 56 2.159179 ATACCTGGCCATGGAAAACC 57.841 50.000 23.24 7.65 0.00 3.27
56 57 5.140454 AGATTATACCTGGCCATGGAAAAC 58.860 41.667 23.24 13.90 0.00 2.43
57 58 5.402054 AGATTATACCTGGCCATGGAAAA 57.598 39.130 23.24 15.02 0.00 2.29
58 59 5.849475 TCTAGATTATACCTGGCCATGGAAA 59.151 40.000 23.24 15.28 0.00 3.13
59 60 5.248477 GTCTAGATTATACCTGGCCATGGAA 59.752 44.000 23.24 10.50 0.00 3.53
60 61 4.777896 GTCTAGATTATACCTGGCCATGGA 59.222 45.833 23.24 11.74 0.00 3.41
61 62 4.532126 TGTCTAGATTATACCTGGCCATGG 59.468 45.833 5.51 13.05 0.00 3.66
62 63 5.745312 TGTCTAGATTATACCTGGCCATG 57.255 43.478 5.51 6.06 0.00 3.66
63 64 5.787494 ACATGTCTAGATTATACCTGGCCAT 59.213 40.000 5.51 0.00 0.00 4.40
64 65 5.155161 ACATGTCTAGATTATACCTGGCCA 58.845 41.667 4.71 4.71 0.00 5.36
65 66 5.746990 ACATGTCTAGATTATACCTGGCC 57.253 43.478 0.00 0.00 0.00 5.36
66 67 6.998802 AGAACATGTCTAGATTATACCTGGC 58.001 40.000 0.00 0.00 33.56 4.85
67 68 8.415950 AGAGAACATGTCTAGATTATACCTGG 57.584 38.462 0.00 0.00 36.41 4.45
95 96 8.077991 GCTGATGCAGTGCTAAAATAATGATAA 58.922 33.333 17.60 0.00 39.41 1.75
96 97 7.571798 CGCTGATGCAGTGCTAAAATAATGATA 60.572 37.037 17.60 0.00 39.64 2.15
97 98 6.444633 GCTGATGCAGTGCTAAAATAATGAT 58.555 36.000 17.60 0.00 39.41 2.45
98 99 5.504501 CGCTGATGCAGTGCTAAAATAATGA 60.505 40.000 17.60 0.00 39.64 2.57
99 100 4.673761 CGCTGATGCAGTGCTAAAATAATG 59.326 41.667 17.60 0.00 39.64 1.90
100 101 4.336433 ACGCTGATGCAGTGCTAAAATAAT 59.664 37.500 17.60 0.00 44.75 1.28
101 102 3.689161 ACGCTGATGCAGTGCTAAAATAA 59.311 39.130 17.60 0.00 44.75 1.40
102 103 3.063861 CACGCTGATGCAGTGCTAAAATA 59.936 43.478 17.60 0.00 44.75 1.40
103 104 2.086869 ACGCTGATGCAGTGCTAAAAT 58.913 42.857 17.60 0.24 44.75 1.82
104 105 1.197492 CACGCTGATGCAGTGCTAAAA 59.803 47.619 17.60 0.00 44.75 1.52
105 106 0.798159 CACGCTGATGCAGTGCTAAA 59.202 50.000 17.60 0.00 44.75 1.85
106 107 2.459245 CACGCTGATGCAGTGCTAA 58.541 52.632 17.60 0.00 44.75 3.09
107 108 4.190350 CACGCTGATGCAGTGCTA 57.810 55.556 17.60 3.01 44.75 3.49
114 115 0.926846 GAGTAGAAGCACGCTGATGC 59.073 55.000 0.00 0.00 46.50 3.91
115 116 2.159324 TCAGAGTAGAAGCACGCTGATG 60.159 50.000 5.72 0.00 46.26 3.07
116 117 2.095461 TCAGAGTAGAAGCACGCTGAT 58.905 47.619 5.72 0.00 46.26 2.90
118 119 1.068264 TGTCAGAGTAGAAGCACGCTG 60.068 52.381 0.00 1.18 44.74 5.18
119 120 1.248486 TGTCAGAGTAGAAGCACGCT 58.752 50.000 0.00 0.00 0.00 5.07
120 121 2.065993 TTGTCAGAGTAGAAGCACGC 57.934 50.000 0.00 0.00 0.00 5.34
121 122 5.406780 AGAAATTTGTCAGAGTAGAAGCACG 59.593 40.000 0.00 0.00 0.00 5.34
122 123 6.793492 AGAAATTTGTCAGAGTAGAAGCAC 57.207 37.500 0.00 0.00 0.00 4.40
123 124 6.591834 GCTAGAAATTTGTCAGAGTAGAAGCA 59.408 38.462 0.00 0.00 0.00 3.91
124 125 6.816140 AGCTAGAAATTTGTCAGAGTAGAAGC 59.184 38.462 0.00 0.00 0.00 3.86
125 126 7.816995 ACAGCTAGAAATTTGTCAGAGTAGAAG 59.183 37.037 0.00 0.00 0.00 2.85
126 127 7.671302 ACAGCTAGAAATTTGTCAGAGTAGAA 58.329 34.615 0.00 0.00 0.00 2.10
127 128 7.233389 ACAGCTAGAAATTTGTCAGAGTAGA 57.767 36.000 0.00 0.00 0.00 2.59
128 129 6.533367 GGACAGCTAGAAATTTGTCAGAGTAG 59.467 42.308 0.00 0.00 41.22 2.57
129 130 6.014584 TGGACAGCTAGAAATTTGTCAGAGTA 60.015 38.462 0.00 0.00 41.22 2.59
130 131 5.221722 TGGACAGCTAGAAATTTGTCAGAGT 60.222 40.000 0.00 0.00 41.22 3.24
131 132 5.240891 TGGACAGCTAGAAATTTGTCAGAG 58.759 41.667 0.00 0.00 41.22 3.35
132 133 5.227569 TGGACAGCTAGAAATTTGTCAGA 57.772 39.130 0.00 0.00 41.22 3.27
133 134 5.239306 TGTTGGACAGCTAGAAATTTGTCAG 59.761 40.000 0.00 0.00 41.22 3.51
134 135 5.129634 TGTTGGACAGCTAGAAATTTGTCA 58.870 37.500 0.00 0.00 41.22 3.58
135 136 5.689383 TGTTGGACAGCTAGAAATTTGTC 57.311 39.130 0.00 0.00 39.29 3.18
136 137 6.449698 CATTGTTGGACAGCTAGAAATTTGT 58.550 36.000 0.00 0.00 0.00 2.83
137 138 5.865552 CCATTGTTGGACAGCTAGAAATTTG 59.134 40.000 0.00 0.00 46.92 2.32
138 139 5.539955 ACCATTGTTGGACAGCTAGAAATTT 59.460 36.000 0.00 0.00 46.92 1.82
139 140 5.047802 CACCATTGTTGGACAGCTAGAAATT 60.048 40.000 0.00 0.00 46.92 1.82
140 141 4.460382 CACCATTGTTGGACAGCTAGAAAT 59.540 41.667 0.00 0.00 46.92 2.17
141 142 3.820467 CACCATTGTTGGACAGCTAGAAA 59.180 43.478 0.00 0.00 46.92 2.52
142 143 3.411446 CACCATTGTTGGACAGCTAGAA 58.589 45.455 0.00 0.00 46.92 2.10
143 144 2.875672 GCACCATTGTTGGACAGCTAGA 60.876 50.000 0.00 0.00 46.92 2.43
144 145 1.470098 GCACCATTGTTGGACAGCTAG 59.530 52.381 0.00 0.00 46.92 3.42
145 146 1.533625 GCACCATTGTTGGACAGCTA 58.466 50.000 0.00 0.00 46.92 3.32
146 147 1.518056 CGCACCATTGTTGGACAGCT 61.518 55.000 0.00 0.00 46.92 4.24
147 148 1.081242 CGCACCATTGTTGGACAGC 60.081 57.895 0.00 0.00 46.92 4.40
148 149 0.888736 TCCGCACCATTGTTGGACAG 60.889 55.000 0.00 0.00 46.92 3.51
149 150 0.888736 CTCCGCACCATTGTTGGACA 60.889 55.000 0.00 0.00 46.92 4.02
150 151 1.875963 CTCCGCACCATTGTTGGAC 59.124 57.895 0.00 0.00 46.92 4.02
151 152 1.971167 GCTCCGCACCATTGTTGGA 60.971 57.895 0.00 0.00 46.92 3.53
153 154 1.973281 AGGCTCCGCACCATTGTTG 60.973 57.895 0.00 0.00 0.00 3.33
154 155 1.973281 CAGGCTCCGCACCATTGTT 60.973 57.895 0.00 0.00 0.00 2.83
155 156 2.360350 CAGGCTCCGCACCATTGT 60.360 61.111 0.00 0.00 0.00 2.71
156 157 3.818787 GCAGGCTCCGCACCATTG 61.819 66.667 0.00 0.00 0.00 2.82
157 158 4.039092 AGCAGGCTCCGCACCATT 62.039 61.111 0.00 0.00 0.00 3.16
158 159 4.790962 CAGCAGGCTCCGCACCAT 62.791 66.667 0.00 0.00 0.00 3.55
169 170 4.290622 AAGTGGGTGGGCAGCAGG 62.291 66.667 0.00 0.00 0.00 4.85
170 171 2.674380 GAAGTGGGTGGGCAGCAG 60.674 66.667 0.00 0.00 0.00 4.24
171 172 3.177884 AGAAGTGGGTGGGCAGCA 61.178 61.111 0.00 0.00 0.00 4.41
172 173 2.490270 ATCAGAAGTGGGTGGGCAGC 62.490 60.000 0.00 0.00 0.00 5.25
173 174 0.038744 AATCAGAAGTGGGTGGGCAG 59.961 55.000 0.00 0.00 0.00 4.85
174 175 1.281867 CTAATCAGAAGTGGGTGGGCA 59.718 52.381 0.00 0.00 0.00 5.36
175 176 1.282157 ACTAATCAGAAGTGGGTGGGC 59.718 52.381 0.00 0.00 0.00 5.36
176 177 3.721087 AACTAATCAGAAGTGGGTGGG 57.279 47.619 0.00 0.00 0.00 4.61
177 178 5.070001 TGAAAACTAATCAGAAGTGGGTGG 58.930 41.667 0.00 0.00 0.00 4.61
178 179 6.294176 CCTTGAAAACTAATCAGAAGTGGGTG 60.294 42.308 0.00 0.00 0.00 4.61
179 180 5.770162 CCTTGAAAACTAATCAGAAGTGGGT 59.230 40.000 0.00 0.00 0.00 4.51
180 181 5.183904 CCCTTGAAAACTAATCAGAAGTGGG 59.816 44.000 0.00 0.00 0.00 4.61
181 182 5.770162 ACCCTTGAAAACTAATCAGAAGTGG 59.230 40.000 0.00 0.00 0.00 4.00
182 183 6.486657 TGACCCTTGAAAACTAATCAGAAGTG 59.513 38.462 0.00 0.00 0.00 3.16
183 184 6.601332 TGACCCTTGAAAACTAATCAGAAGT 58.399 36.000 0.00 0.00 0.00 3.01
184 185 6.936900 TCTGACCCTTGAAAACTAATCAGAAG 59.063 38.462 0.00 0.00 38.63 2.85
185 186 6.710744 GTCTGACCCTTGAAAACTAATCAGAA 59.289 38.462 2.39 0.00 42.05 3.02
186 187 6.043243 AGTCTGACCCTTGAAAACTAATCAGA 59.957 38.462 3.76 0.00 39.12 3.27
187 188 6.234177 AGTCTGACCCTTGAAAACTAATCAG 58.766 40.000 3.76 0.00 34.87 2.90
188 189 6.183361 TGAGTCTGACCCTTGAAAACTAATCA 60.183 38.462 3.76 0.00 0.00 2.57
189 190 6.231211 TGAGTCTGACCCTTGAAAACTAATC 58.769 40.000 3.76 0.00 0.00 1.75
190 191 6.187727 TGAGTCTGACCCTTGAAAACTAAT 57.812 37.500 3.76 0.00 0.00 1.73
191 192 5.623956 TGAGTCTGACCCTTGAAAACTAA 57.376 39.130 3.76 0.00 0.00 2.24
192 193 5.130477 AGTTGAGTCTGACCCTTGAAAACTA 59.870 40.000 3.76 0.00 0.00 2.24
193 194 4.080299 AGTTGAGTCTGACCCTTGAAAACT 60.080 41.667 3.76 0.00 0.00 2.66
194 195 4.200092 AGTTGAGTCTGACCCTTGAAAAC 58.800 43.478 3.76 0.00 0.00 2.43
195 196 4.451900 GAGTTGAGTCTGACCCTTGAAAA 58.548 43.478 3.76 0.00 0.00 2.29
196 197 3.181454 GGAGTTGAGTCTGACCCTTGAAA 60.181 47.826 3.76 0.00 0.00 2.69
197 198 2.368875 GGAGTTGAGTCTGACCCTTGAA 59.631 50.000 3.76 0.00 0.00 2.69
198 199 1.971357 GGAGTTGAGTCTGACCCTTGA 59.029 52.381 3.76 0.00 0.00 3.02
199 200 1.002544 GGGAGTTGAGTCTGACCCTTG 59.997 57.143 3.76 0.00 35.03 3.61
200 201 1.353091 GGGAGTTGAGTCTGACCCTT 58.647 55.000 3.76 0.00 35.03 3.95
201 202 0.191064 TGGGAGTTGAGTCTGACCCT 59.809 55.000 3.76 0.00 38.28 4.34
202 203 0.321996 GTGGGAGTTGAGTCTGACCC 59.678 60.000 3.76 0.00 37.99 4.46
203 204 0.038159 CGTGGGAGTTGAGTCTGACC 60.038 60.000 3.76 0.00 0.00 4.02
204 205 0.674534 ACGTGGGAGTTGAGTCTGAC 59.325 55.000 0.00 0.00 0.00 3.51
205 206 0.959553 GACGTGGGAGTTGAGTCTGA 59.040 55.000 0.00 0.00 0.00 3.27
206 207 0.962489 AGACGTGGGAGTTGAGTCTG 59.038 55.000 0.00 0.00 40.25 3.51
207 208 2.581216 TAGACGTGGGAGTTGAGTCT 57.419 50.000 0.00 2.01 43.58 3.24
208 209 3.870633 AATAGACGTGGGAGTTGAGTC 57.129 47.619 0.00 0.00 0.00 3.36
209 210 5.934402 ATAAATAGACGTGGGAGTTGAGT 57.066 39.130 0.00 0.00 0.00 3.41
210 211 6.816640 TCAAATAAATAGACGTGGGAGTTGAG 59.183 38.462 0.00 0.00 0.00 3.02
211 212 6.703319 TCAAATAAATAGACGTGGGAGTTGA 58.297 36.000 0.00 0.00 0.00 3.18
212 213 6.978343 TCAAATAAATAGACGTGGGAGTTG 57.022 37.500 0.00 0.00 0.00 3.16
213 214 7.391620 TCTTCAAATAAATAGACGTGGGAGTT 58.608 34.615 0.00 0.00 0.00 3.01
214 215 6.942976 TCTTCAAATAAATAGACGTGGGAGT 58.057 36.000 0.00 0.00 0.00 3.85
215 216 7.843490 TTCTTCAAATAAATAGACGTGGGAG 57.157 36.000 0.00 0.00 0.00 4.30
216 217 8.624367 TTTTCTTCAAATAAATAGACGTGGGA 57.376 30.769 0.00 0.00 0.00 4.37
247 248 1.205655 TCTCTGATGGCTTCGACAAGG 59.794 52.381 0.00 0.00 0.00 3.61
248 249 2.662006 TCTCTGATGGCTTCGACAAG 57.338 50.000 0.00 0.00 0.00 3.16
249 250 2.480244 CGATCTCTGATGGCTTCGACAA 60.480 50.000 0.00 0.00 0.00 3.18
250 251 1.066152 CGATCTCTGATGGCTTCGACA 59.934 52.381 0.00 0.00 0.00 4.35
251 252 1.601663 CCGATCTCTGATGGCTTCGAC 60.602 57.143 0.00 0.00 0.00 4.20
252 253 0.670706 CCGATCTCTGATGGCTTCGA 59.329 55.000 0.00 0.00 0.00 3.71
253 254 0.387202 ACCGATCTCTGATGGCTTCG 59.613 55.000 0.00 0.00 0.00 3.79
254 255 1.863267 CACCGATCTCTGATGGCTTC 58.137 55.000 0.00 0.00 0.00 3.86
255 256 0.179062 GCACCGATCTCTGATGGCTT 60.179 55.000 0.00 0.00 0.00 4.35
256 257 1.332889 TGCACCGATCTCTGATGGCT 61.333 55.000 0.00 0.00 0.00 4.75
257 258 1.144716 TGCACCGATCTCTGATGGC 59.855 57.895 0.00 0.00 0.00 4.40
258 259 0.873312 CGTGCACCGATCTCTGATGG 60.873 60.000 12.15 0.00 39.56 3.51
259 260 0.101219 TCGTGCACCGATCTCTGATG 59.899 55.000 12.15 0.00 41.60 3.07
260 261 2.493547 TCGTGCACCGATCTCTGAT 58.506 52.632 12.15 0.00 41.60 2.90
261 262 3.996614 TCGTGCACCGATCTCTGA 58.003 55.556 12.15 0.00 41.60 3.27
271 272 4.134187 CGCATCGGTGTCGTGCAC 62.134 66.667 6.82 6.82 46.97 4.57
272 273 2.750715 TAACGCATCGGTGTCGTGCA 62.751 55.000 16.65 7.30 40.61 4.57
273 274 1.619526 TTAACGCATCGGTGTCGTGC 61.620 55.000 16.65 2.24 37.85 5.34
274 275 0.785378 TTTAACGCATCGGTGTCGTG 59.215 50.000 16.65 0.00 37.85 4.35
275 276 1.192980 GTTTTAACGCATCGGTGTCGT 59.807 47.619 11.47 11.47 38.88 4.34
276 277 1.192757 TGTTTTAACGCATCGGTGTCG 59.807 47.619 10.28 10.28 36.56 4.35
277 278 2.953640 TGTTTTAACGCATCGGTGTC 57.046 45.000 0.00 0.00 36.56 3.67
278 279 3.694535 TTTGTTTTAACGCATCGGTGT 57.305 38.095 0.00 0.00 40.06 4.16
279 280 5.361905 CATTTTTGTTTTAACGCATCGGTG 58.638 37.500 0.00 0.00 0.00 4.94
280 281 4.446051 CCATTTTTGTTTTAACGCATCGGT 59.554 37.500 0.00 0.00 0.00 4.69
281 282 4.665394 GCCATTTTTGTTTTAACGCATCGG 60.665 41.667 0.00 0.00 0.00 4.18
282 283 4.084849 TGCCATTTTTGTTTTAACGCATCG 60.085 37.500 0.00 0.00 0.00 3.84
283 284 5.136711 GTGCCATTTTTGTTTTAACGCATC 58.863 37.500 0.00 0.00 0.00 3.91
284 285 4.572389 TGTGCCATTTTTGTTTTAACGCAT 59.428 33.333 0.00 0.00 0.00 4.73
285 286 3.932710 TGTGCCATTTTTGTTTTAACGCA 59.067 34.783 0.00 0.00 0.00 5.24
286 287 4.522297 TGTGCCATTTTTGTTTTAACGC 57.478 36.364 0.00 0.00 0.00 4.84
287 288 7.846485 ACTTATGTGCCATTTTTGTTTTAACG 58.154 30.769 0.00 0.00 0.00 3.18
288 289 9.644993 GAACTTATGTGCCATTTTTGTTTTAAC 57.355 29.630 0.00 0.00 0.00 2.01
289 290 9.383519 TGAACTTATGTGCCATTTTTGTTTTAA 57.616 25.926 0.00 0.00 0.00 1.52
290 291 8.948631 TGAACTTATGTGCCATTTTTGTTTTA 57.051 26.923 0.00 0.00 0.00 1.52
291 292 7.552330 ACTGAACTTATGTGCCATTTTTGTTTT 59.448 29.630 0.00 0.00 0.00 2.43
292 293 7.047271 ACTGAACTTATGTGCCATTTTTGTTT 58.953 30.769 0.00 0.00 0.00 2.83
293 294 6.581712 ACTGAACTTATGTGCCATTTTTGTT 58.418 32.000 0.00 0.00 0.00 2.83
294 295 6.160576 ACTGAACTTATGTGCCATTTTTGT 57.839 33.333 0.00 0.00 0.00 2.83
295 296 6.700960 TGAACTGAACTTATGTGCCATTTTTG 59.299 34.615 0.00 0.00 0.00 2.44
296 297 6.815089 TGAACTGAACTTATGTGCCATTTTT 58.185 32.000 0.00 0.00 0.00 1.94
297 298 6.265196 TCTGAACTGAACTTATGTGCCATTTT 59.735 34.615 0.00 0.00 0.00 1.82
298 299 5.769662 TCTGAACTGAACTTATGTGCCATTT 59.230 36.000 0.00 0.00 0.00 2.32
299 300 5.316167 TCTGAACTGAACTTATGTGCCATT 58.684 37.500 0.00 0.00 0.00 3.16
300 301 4.910195 TCTGAACTGAACTTATGTGCCAT 58.090 39.130 0.00 0.00 0.00 4.40
301 302 4.350368 TCTGAACTGAACTTATGTGCCA 57.650 40.909 0.00 0.00 0.00 4.92
302 303 4.083271 GGTTCTGAACTGAACTTATGTGCC 60.083 45.833 19.05 0.00 44.02 5.01
303 304 4.515191 TGGTTCTGAACTGAACTTATGTGC 59.485 41.667 19.05 0.00 44.02 4.57
304 305 6.605849 CATGGTTCTGAACTGAACTTATGTG 58.394 40.000 19.05 10.21 44.02 3.21
305 306 5.182001 GCATGGTTCTGAACTGAACTTATGT 59.818 40.000 19.05 9.97 44.02 2.29
306 307 5.413833 AGCATGGTTCTGAACTGAACTTATG 59.586 40.000 19.05 20.25 44.02 1.90
307 308 5.564550 AGCATGGTTCTGAACTGAACTTAT 58.435 37.500 19.05 12.89 44.02 1.73
308 309 4.973168 AGCATGGTTCTGAACTGAACTTA 58.027 39.130 19.05 11.68 44.02 2.24
309 310 3.825328 AGCATGGTTCTGAACTGAACTT 58.175 40.909 19.05 8.61 44.02 2.66
310 311 3.498774 AGCATGGTTCTGAACTGAACT 57.501 42.857 19.05 9.87 44.02 3.01
311 312 4.997395 TCTTAGCATGGTTCTGAACTGAAC 59.003 41.667 19.05 13.49 43.88 3.18
312 313 5.227569 TCTTAGCATGGTTCTGAACTGAA 57.772 39.130 19.05 6.97 0.00 3.02
313 314 4.825422 CTCTTAGCATGGTTCTGAACTGA 58.175 43.478 19.05 7.71 0.00 3.41
314 315 3.373439 GCTCTTAGCATGGTTCTGAACTG 59.627 47.826 19.05 12.00 41.89 3.16
315 316 3.604582 GCTCTTAGCATGGTTCTGAACT 58.395 45.455 19.05 2.79 41.89 3.01
328 329 4.725790 AATTTGGAACCATGCTCTTAGC 57.274 40.909 0.00 0.00 42.82 3.09
338 339 9.661954 TGGCCTAAATATATAAATTTGGAACCA 57.338 29.630 3.32 9.11 34.29 3.67
346 347 9.321532 GGGACCTTTGGCCTAAATATATAAATT 57.678 33.333 3.32 0.00 0.00 1.82
347 348 8.688117 AGGGACCTTTGGCCTAAATATATAAAT 58.312 33.333 3.32 0.00 0.00 1.40
348 349 8.064219 AGGGACCTTTGGCCTAAATATATAAA 57.936 34.615 3.32 0.00 0.00 1.40
349 350 7.657352 AGGGACCTTTGGCCTAAATATATAA 57.343 36.000 3.32 0.00 0.00 0.98
350 351 7.657352 AAGGGACCTTTGGCCTAAATATATA 57.343 36.000 3.32 0.00 31.29 0.86
351 352 6.545860 AAGGGACCTTTGGCCTAAATATAT 57.454 37.500 3.32 0.00 31.29 0.86
352 353 6.349897 AAAGGGACCTTTGGCCTAAATATA 57.650 37.500 15.17 0.00 43.72 0.86
353 354 4.899898 AAGGGACCTTTGGCCTAAATAT 57.100 40.909 3.32 0.00 31.29 1.28
354 355 4.685513 AAAGGGACCTTTGGCCTAAATA 57.314 40.909 15.17 0.00 43.72 1.40
355 356 3.560357 AAAGGGACCTTTGGCCTAAAT 57.440 42.857 15.17 0.00 43.72 1.40
356 357 3.140519 TGTAAAGGGACCTTTGGCCTAAA 59.859 43.478 23.09 2.03 44.84 1.85
357 358 2.717515 TGTAAAGGGACCTTTGGCCTAA 59.282 45.455 23.09 0.53 44.84 2.69
358 359 2.040679 GTGTAAAGGGACCTTTGGCCTA 59.959 50.000 23.09 3.22 44.84 3.93
359 360 1.154430 TGTAAAGGGACCTTTGGCCT 58.846 50.000 23.09 2.41 44.84 5.19
360 361 1.203013 AGTGTAAAGGGACCTTTGGCC 60.203 52.381 23.09 12.74 44.84 5.36
361 362 2.287977 AGTGTAAAGGGACCTTTGGC 57.712 50.000 23.09 16.38 44.84 4.52
362 363 4.903045 TCTAGTGTAAAGGGACCTTTGG 57.097 45.455 23.09 2.22 44.84 3.28
363 364 6.049955 TGATCTAGTGTAAAGGGACCTTTG 57.950 41.667 23.09 8.11 44.84 2.77
364 365 5.338463 GCTGATCTAGTGTAAAGGGACCTTT 60.338 44.000 19.27 19.27 46.56 3.11
365 366 4.162509 GCTGATCTAGTGTAAAGGGACCTT 59.837 45.833 0.00 0.00 37.98 3.50
366 367 3.707102 GCTGATCTAGTGTAAAGGGACCT 59.293 47.826 0.00 0.00 0.00 3.85
367 368 3.707102 AGCTGATCTAGTGTAAAGGGACC 59.293 47.826 0.00 0.00 0.00 4.46
368 369 4.402793 TGAGCTGATCTAGTGTAAAGGGAC 59.597 45.833 0.00 0.00 0.00 4.46
369 370 4.402793 GTGAGCTGATCTAGTGTAAAGGGA 59.597 45.833 0.00 0.00 0.00 4.20
370 371 4.442192 GGTGAGCTGATCTAGTGTAAAGGG 60.442 50.000 0.00 0.00 0.00 3.95
371 372 4.160439 TGGTGAGCTGATCTAGTGTAAAGG 59.840 45.833 0.00 0.00 0.00 3.11
372 373 5.330455 TGGTGAGCTGATCTAGTGTAAAG 57.670 43.478 0.00 0.00 0.00 1.85
373 374 4.382040 GCTGGTGAGCTGATCTAGTGTAAA 60.382 45.833 0.00 0.00 42.52 2.01
374 375 3.131223 GCTGGTGAGCTGATCTAGTGTAA 59.869 47.826 0.00 0.00 42.52 2.41
375 376 2.690497 GCTGGTGAGCTGATCTAGTGTA 59.310 50.000 0.00 0.00 42.52 2.90
376 377 1.480137 GCTGGTGAGCTGATCTAGTGT 59.520 52.381 0.00 0.00 42.52 3.55
377 378 1.202510 GGCTGGTGAGCTGATCTAGTG 60.203 57.143 0.00 0.00 45.44 2.74
378 379 1.118838 GGCTGGTGAGCTGATCTAGT 58.881 55.000 0.00 0.00 45.44 2.57
379 380 0.392336 GGGCTGGTGAGCTGATCTAG 59.608 60.000 0.00 0.00 45.44 2.43
380 381 0.325577 TGGGCTGGTGAGCTGATCTA 60.326 55.000 0.00 0.00 45.44 1.98
381 382 0.987081 ATGGGCTGGTGAGCTGATCT 60.987 55.000 0.00 0.00 45.44 2.75
382 383 0.106819 AATGGGCTGGTGAGCTGATC 60.107 55.000 0.00 0.00 45.44 2.92
383 384 0.106819 GAATGGGCTGGTGAGCTGAT 60.107 55.000 0.00 0.00 45.44 2.90
384 385 1.203441 AGAATGGGCTGGTGAGCTGA 61.203 55.000 0.00 0.00 45.44 4.26
385 386 0.747283 GAGAATGGGCTGGTGAGCTG 60.747 60.000 0.00 0.00 45.44 4.24
386 387 0.913451 AGAGAATGGGCTGGTGAGCT 60.913 55.000 0.00 0.00 45.44 4.09
387 388 0.747283 CAGAGAATGGGCTGGTGAGC 60.747 60.000 0.00 0.00 45.40 4.26
388 389 0.907486 TCAGAGAATGGGCTGGTGAG 59.093 55.000 0.00 0.00 33.05 3.51
389 390 0.615331 GTCAGAGAATGGGCTGGTGA 59.385 55.000 0.00 0.00 33.05 4.02
390 391 0.393537 GGTCAGAGAATGGGCTGGTG 60.394 60.000 0.00 0.00 33.05 4.17
391 392 0.842030 TGGTCAGAGAATGGGCTGGT 60.842 55.000 0.00 0.00 33.05 4.00
392 393 0.329261 TTGGTCAGAGAATGGGCTGG 59.671 55.000 0.00 0.00 33.05 4.85
393 394 2.431954 ATTGGTCAGAGAATGGGCTG 57.568 50.000 0.00 0.00 0.00 4.85
394 395 3.011032 AGAAATTGGTCAGAGAATGGGCT 59.989 43.478 0.00 0.00 0.00 5.19
395 396 3.359950 AGAAATTGGTCAGAGAATGGGC 58.640 45.455 0.00 0.00 0.00 5.36
396 397 4.853007 AGAGAAATTGGTCAGAGAATGGG 58.147 43.478 0.00 0.00 0.00 4.00
397 398 6.882656 TCTAGAGAAATTGGTCAGAGAATGG 58.117 40.000 0.00 0.00 0.00 3.16
398 399 7.279758 GGTTCTAGAGAAATTGGTCAGAGAATG 59.720 40.741 0.00 0.00 35.58 2.67
399 400 7.038017 TGGTTCTAGAGAAATTGGTCAGAGAAT 60.038 37.037 0.00 0.00 35.58 2.40
400 401 6.270000 TGGTTCTAGAGAAATTGGTCAGAGAA 59.730 38.462 0.00 0.00 35.58 2.87
401 402 5.780282 TGGTTCTAGAGAAATTGGTCAGAGA 59.220 40.000 0.00 0.00 35.58 3.10
402 403 6.042638 TGGTTCTAGAGAAATTGGTCAGAG 57.957 41.667 0.00 0.00 35.58 3.35
403 404 5.046304 CCTGGTTCTAGAGAAATTGGTCAGA 60.046 44.000 0.00 0.00 35.58 3.27
404 405 5.181748 CCTGGTTCTAGAGAAATTGGTCAG 58.818 45.833 0.00 0.00 35.58 3.51
405 406 4.565652 GCCTGGTTCTAGAGAAATTGGTCA 60.566 45.833 0.00 0.00 35.58 4.02
406 407 3.942115 GCCTGGTTCTAGAGAAATTGGTC 59.058 47.826 0.00 0.00 35.58 4.02
407 408 3.308473 GGCCTGGTTCTAGAGAAATTGGT 60.308 47.826 0.00 0.00 35.58 3.67
408 409 3.282885 GGCCTGGTTCTAGAGAAATTGG 58.717 50.000 0.00 0.00 35.58 3.16
409 410 3.955471 TGGCCTGGTTCTAGAGAAATTG 58.045 45.455 3.32 0.00 35.58 2.32
410 411 4.870021 ATGGCCTGGTTCTAGAGAAATT 57.130 40.909 3.32 0.00 35.58 1.82
411 412 5.975988 TTATGGCCTGGTTCTAGAGAAAT 57.024 39.130 3.32 0.00 35.58 2.17
412 413 5.975988 ATTATGGCCTGGTTCTAGAGAAA 57.024 39.130 3.32 0.00 35.58 2.52
413 414 6.558775 ACATATTATGGCCTGGTTCTAGAGAA 59.441 38.462 3.32 0.00 33.60 2.87
414 415 6.084738 ACATATTATGGCCTGGTTCTAGAGA 58.915 40.000 3.32 0.00 33.60 3.10
415 416 6.365970 ACATATTATGGCCTGGTTCTAGAG 57.634 41.667 3.32 0.00 33.60 2.43
416 417 6.763715 AACATATTATGGCCTGGTTCTAGA 57.236 37.500 3.32 0.00 33.60 2.43
417 418 8.498054 CATAACATATTATGGCCTGGTTCTAG 57.502 38.462 3.32 0.00 42.75 2.43
436 437 9.800433 CAATATTGGCAAGAACATAACATAACA 57.200 29.630 5.96 0.00 0.00 2.41
440 441 9.590451 CTTTCAATATTGGCAAGAACATAACAT 57.410 29.630 15.36 0.00 0.00 2.71
441 442 7.545265 GCTTTCAATATTGGCAAGAACATAACA 59.455 33.333 22.63 0.00 0.00 2.41
442 443 7.010460 GGCTTTCAATATTGGCAAGAACATAAC 59.990 37.037 22.63 9.83 0.00 1.89
443 444 7.041107 GGCTTTCAATATTGGCAAGAACATAA 58.959 34.615 22.63 4.37 0.00 1.90
444 445 6.572519 GGCTTTCAATATTGGCAAGAACATA 58.427 36.000 22.63 0.00 0.00 2.29
445 446 5.422145 GGCTTTCAATATTGGCAAGAACAT 58.578 37.500 22.63 0.00 0.00 2.71
446 447 4.617995 CGGCTTTCAATATTGGCAAGAACA 60.618 41.667 22.63 0.24 0.00 3.18
447 448 3.859386 CGGCTTTCAATATTGGCAAGAAC 59.141 43.478 22.63 16.01 0.00 3.01
448 449 3.675775 GCGGCTTTCAATATTGGCAAGAA 60.676 43.478 22.63 0.48 0.00 2.52
449 450 2.159254 GCGGCTTTCAATATTGGCAAGA 60.159 45.455 22.63 0.09 0.00 3.02
450 451 2.195922 GCGGCTTTCAATATTGGCAAG 58.804 47.619 15.36 16.69 0.00 4.01
451 452 1.547820 TGCGGCTTTCAATATTGGCAA 59.452 42.857 15.36 0.68 0.00 4.52
452 453 1.180907 TGCGGCTTTCAATATTGGCA 58.819 45.000 15.36 12.25 0.00 4.92
453 454 2.292103 TTGCGGCTTTCAATATTGGC 57.708 45.000 15.36 10.59 0.00 4.52
454 455 3.583806 TGTTTGCGGCTTTCAATATTGG 58.416 40.909 15.36 0.94 0.00 3.16
455 456 4.484236 TCTGTTTGCGGCTTTCAATATTG 58.516 39.130 9.29 9.29 0.00 1.90
456 457 4.782019 TCTGTTTGCGGCTTTCAATATT 57.218 36.364 0.00 0.00 0.00 1.28
457 458 4.989279 ATCTGTTTGCGGCTTTCAATAT 57.011 36.364 0.00 0.00 0.00 1.28
458 459 4.782019 AATCTGTTTGCGGCTTTCAATA 57.218 36.364 0.00 0.00 0.00 1.90
459 460 3.665745 AATCTGTTTGCGGCTTTCAAT 57.334 38.095 0.00 0.00 0.00 2.57
460 461 3.316588 TGTAATCTGTTTGCGGCTTTCAA 59.683 39.130 0.00 0.00 0.00 2.69
461 462 2.881513 TGTAATCTGTTTGCGGCTTTCA 59.118 40.909 0.00 0.00 0.00 2.69
462 463 3.492313 CTGTAATCTGTTTGCGGCTTTC 58.508 45.455 0.00 0.00 0.00 2.62
463 464 2.228822 CCTGTAATCTGTTTGCGGCTTT 59.771 45.455 0.00 0.00 0.00 3.51
464 465 1.812571 CCTGTAATCTGTTTGCGGCTT 59.187 47.619 0.00 0.00 0.00 4.35
465 466 1.453155 CCTGTAATCTGTTTGCGGCT 58.547 50.000 0.00 0.00 0.00 5.52
466 467 0.451783 CCCTGTAATCTGTTTGCGGC 59.548 55.000 0.00 0.00 0.00 6.53
467 468 0.451783 GCCCTGTAATCTGTTTGCGG 59.548 55.000 0.00 0.00 0.00 5.69
468 469 1.164411 TGCCCTGTAATCTGTTTGCG 58.836 50.000 0.00 0.00 0.00 4.85
469 470 2.094545 CCTTGCCCTGTAATCTGTTTGC 60.095 50.000 0.00 0.00 0.00 3.68
470 471 3.157087 ACCTTGCCCTGTAATCTGTTTG 58.843 45.455 0.00 0.00 0.00 2.93
471 472 3.181434 TGACCTTGCCCTGTAATCTGTTT 60.181 43.478 0.00 0.00 0.00 2.83
472 473 2.375174 TGACCTTGCCCTGTAATCTGTT 59.625 45.455 0.00 0.00 0.00 3.16
473 474 1.985159 TGACCTTGCCCTGTAATCTGT 59.015 47.619 0.00 0.00 0.00 3.41
474 475 2.787473 TGACCTTGCCCTGTAATCTG 57.213 50.000 0.00 0.00 0.00 2.90
475 476 2.684927 GCATGACCTTGCCCTGTAATCT 60.685 50.000 0.00 0.00 36.60 2.40
476 477 1.678101 GCATGACCTTGCCCTGTAATC 59.322 52.381 0.00 0.00 36.60 1.75
477 478 1.767759 GCATGACCTTGCCCTGTAAT 58.232 50.000 0.00 0.00 36.60 1.89
478 479 3.264574 GCATGACCTTGCCCTGTAA 57.735 52.632 0.00 0.00 36.60 2.41
485 486 1.176527 TTAAGCTGGCATGACCTTGC 58.823 50.000 0.00 6.39 42.01 4.01
486 487 2.756760 ACATTAAGCTGGCATGACCTTG 59.243 45.455 0.00 0.00 40.22 3.61
487 488 3.091633 ACATTAAGCTGGCATGACCTT 57.908 42.857 0.00 0.00 40.22 3.50
488 489 2.814805 ACATTAAGCTGGCATGACCT 57.185 45.000 0.00 0.00 40.22 3.85
489 490 4.399303 AGTTTACATTAAGCTGGCATGACC 59.601 41.667 0.00 0.00 39.84 4.02
490 491 5.567138 AGTTTACATTAAGCTGGCATGAC 57.433 39.130 0.00 0.00 0.00 3.06
491 492 5.622007 GCAAGTTTACATTAAGCTGGCATGA 60.622 40.000 0.00 0.00 43.12 3.07
492 493 4.563976 GCAAGTTTACATTAAGCTGGCATG 59.436 41.667 4.73 0.00 43.12 4.06
493 494 4.463891 AGCAAGTTTACATTAAGCTGGCAT 59.536 37.500 10.64 0.00 45.20 4.40
494 495 3.826157 AGCAAGTTTACATTAAGCTGGCA 59.174 39.130 10.64 0.00 45.20 4.92
495 496 4.440839 AGCAAGTTTACATTAAGCTGGC 57.559 40.909 1.90 1.90 43.72 4.85
496 497 5.048083 TGGAAGCAAGTTTACATTAAGCTGG 60.048 40.000 0.00 0.00 29.33 4.85
497 498 6.012658 TGGAAGCAAGTTTACATTAAGCTG 57.987 37.500 0.00 0.00 29.33 4.24
498 499 6.648879 TTGGAAGCAAGTTTACATTAAGCT 57.351 33.333 0.00 0.00 0.00 3.74
499 500 6.868339 ACATTGGAAGCAAGTTTACATTAAGC 59.132 34.615 0.00 0.00 0.00 3.09
500 501 7.867403 ACACATTGGAAGCAAGTTTACATTAAG 59.133 33.333 0.00 0.00 0.00 1.85
501 502 7.651304 CACACATTGGAAGCAAGTTTACATTAA 59.349 33.333 0.00 0.00 0.00 1.40
502 503 7.144661 CACACATTGGAAGCAAGTTTACATTA 58.855 34.615 0.00 0.00 0.00 1.90
503 504 5.984926 CACACATTGGAAGCAAGTTTACATT 59.015 36.000 0.00 0.00 0.00 2.71
504 505 5.531634 CACACATTGGAAGCAAGTTTACAT 58.468 37.500 0.00 0.00 0.00 2.29
505 506 4.736168 GCACACATTGGAAGCAAGTTTACA 60.736 41.667 0.00 0.00 0.00 2.41
506 507 3.735746 GCACACATTGGAAGCAAGTTTAC 59.264 43.478 0.00 0.00 0.00 2.01
507 508 3.382865 TGCACACATTGGAAGCAAGTTTA 59.617 39.130 0.00 0.00 31.42 2.01
508 509 2.168106 TGCACACATTGGAAGCAAGTTT 59.832 40.909 0.00 0.00 31.42 2.66
509 510 1.755959 TGCACACATTGGAAGCAAGTT 59.244 42.857 0.00 0.00 31.42 2.66
510 511 1.067516 GTGCACACATTGGAAGCAAGT 59.932 47.619 13.17 0.00 36.91 3.16
511 512 1.338973 AGTGCACACATTGGAAGCAAG 59.661 47.619 21.04 0.00 36.91 4.01
512 513 1.067364 CAGTGCACACATTGGAAGCAA 59.933 47.619 21.04 0.00 36.91 3.91
513 514 0.669619 CAGTGCACACATTGGAAGCA 59.330 50.000 21.04 0.00 30.25 3.91
514 515 0.665369 GCAGTGCACACATTGGAAGC 60.665 55.000 21.04 4.73 34.27 3.86
515 516 0.669619 TGCAGTGCACACATTGGAAG 59.330 50.000 21.04 0.00 34.27 3.46
516 517 1.270274 GATGCAGTGCACACATTGGAA 59.730 47.619 22.44 0.00 43.04 3.53
517 518 0.883153 GATGCAGTGCACACATTGGA 59.117 50.000 22.44 10.18 43.04 3.53
518 519 0.599060 TGATGCAGTGCACACATTGG 59.401 50.000 22.44 2.04 43.04 3.16
519 520 1.977188 CTGATGCAGTGCACACATTG 58.023 50.000 22.44 9.64 43.04 2.82
520 521 0.242825 GCTGATGCAGTGCACACATT 59.757 50.000 22.44 3.33 43.04 2.71
521 522 1.592400 GGCTGATGCAGTGCACACAT 61.592 55.000 22.44 21.17 43.04 3.21
522 523 2.263021 GGCTGATGCAGTGCACACA 61.263 57.895 22.44 21.22 43.04 3.72
523 524 2.196382 CTGGCTGATGCAGTGCACAC 62.196 60.000 22.44 17.72 43.04 3.82
524 525 1.969589 CTGGCTGATGCAGTGCACA 60.970 57.895 22.44 18.50 43.04 4.57
525 526 1.521450 AACTGGCTGATGCAGTGCAC 61.521 55.000 22.44 9.40 43.04 4.57
526 527 1.228337 AACTGGCTGATGCAGTGCA 60.228 52.632 22.22 22.22 44.86 4.57
527 528 1.239296 TGAACTGGCTGATGCAGTGC 61.239 55.000 8.58 8.58 41.91 4.40
528 529 0.520404 GTGAACTGGCTGATGCAGTG 59.480 55.000 0.00 0.00 41.91 3.66
529 530 0.109153 TGTGAACTGGCTGATGCAGT 59.891 50.000 0.00 0.00 41.91 4.40
530 531 1.400846 GATGTGAACTGGCTGATGCAG 59.599 52.381 0.00 0.00 41.91 4.41
531 532 1.271488 TGATGTGAACTGGCTGATGCA 60.271 47.619 0.00 0.00 41.91 3.96
532 533 1.456296 TGATGTGAACTGGCTGATGC 58.544 50.000 0.00 0.00 38.76 3.91
533 534 3.064958 GTGATGATGTGAACTGGCTGATG 59.935 47.826 0.00 0.00 0.00 3.07
534 535 3.276857 GTGATGATGTGAACTGGCTGAT 58.723 45.455 0.00 0.00 0.00 2.90
535 536 2.038820 TGTGATGATGTGAACTGGCTGA 59.961 45.455 0.00 0.00 0.00 4.26
536 537 2.161012 GTGTGATGATGTGAACTGGCTG 59.839 50.000 0.00 0.00 0.00 4.85
537 538 2.430465 GTGTGATGATGTGAACTGGCT 58.570 47.619 0.00 0.00 0.00 4.75
538 539 1.129251 CGTGTGATGATGTGAACTGGC 59.871 52.381 0.00 0.00 0.00 4.85
539 540 2.413112 GACGTGTGATGATGTGAACTGG 59.587 50.000 0.00 0.00 0.00 4.00
540 541 3.059166 TGACGTGTGATGATGTGAACTG 58.941 45.455 0.00 0.00 0.00 3.16
541 542 3.385193 TGACGTGTGATGATGTGAACT 57.615 42.857 0.00 0.00 0.00 3.01
542 543 4.466567 TTTGACGTGTGATGATGTGAAC 57.533 40.909 0.00 0.00 0.00 3.18
543 544 4.024133 CCTTTTGACGTGTGATGATGTGAA 60.024 41.667 0.00 0.00 0.00 3.18
544 545 3.498018 CCTTTTGACGTGTGATGATGTGA 59.502 43.478 0.00 0.00 0.00 3.58
545 546 3.365264 CCCTTTTGACGTGTGATGATGTG 60.365 47.826 0.00 0.00 0.00 3.21
546 547 2.813754 CCCTTTTGACGTGTGATGATGT 59.186 45.455 0.00 0.00 0.00 3.06
547 548 3.073678 TCCCTTTTGACGTGTGATGATG 58.926 45.455 0.00 0.00 0.00 3.07
548 549 3.007940 TCTCCCTTTTGACGTGTGATGAT 59.992 43.478 0.00 0.00 0.00 2.45
549 550 2.367241 TCTCCCTTTTGACGTGTGATGA 59.633 45.455 0.00 0.00 0.00 2.92
550 551 2.738846 CTCTCCCTTTTGACGTGTGATG 59.261 50.000 0.00 0.00 0.00 3.07
551 552 2.632996 TCTCTCCCTTTTGACGTGTGAT 59.367 45.455 0.00 0.00 0.00 3.06
552 553 2.035961 CTCTCTCCCTTTTGACGTGTGA 59.964 50.000 0.00 0.00 0.00 3.58
553 554 2.408050 CTCTCTCCCTTTTGACGTGTG 58.592 52.381 0.00 0.00 0.00 3.82
554 555 1.270358 GCTCTCTCCCTTTTGACGTGT 60.270 52.381 0.00 0.00 0.00 4.49
555 556 1.001406 AGCTCTCTCCCTTTTGACGTG 59.999 52.381 0.00 0.00 0.00 4.49
556 557 1.273886 GAGCTCTCTCCCTTTTGACGT 59.726 52.381 6.43 0.00 33.19 4.34
557 558 1.734047 CGAGCTCTCTCCCTTTTGACG 60.734 57.143 12.85 0.00 35.94 4.35
558 559 1.546476 TCGAGCTCTCTCCCTTTTGAC 59.454 52.381 12.85 0.00 35.94 3.18
559 560 1.924731 TCGAGCTCTCTCCCTTTTGA 58.075 50.000 12.85 0.00 35.94 2.69
560 561 2.751166 TTCGAGCTCTCTCCCTTTTG 57.249 50.000 12.85 0.00 35.94 2.44
561 562 2.900546 TCTTTCGAGCTCTCTCCCTTTT 59.099 45.455 12.85 0.00 35.94 2.27
562 563 2.495669 CTCTTTCGAGCTCTCTCCCTTT 59.504 50.000 12.85 0.00 35.94 3.11
563 564 2.099405 CTCTTTCGAGCTCTCTCCCTT 58.901 52.381 12.85 0.00 35.94 3.95
564 565 1.283613 TCTCTTTCGAGCTCTCTCCCT 59.716 52.381 12.85 0.00 37.19 4.20
565 566 1.757682 TCTCTTTCGAGCTCTCTCCC 58.242 55.000 12.85 0.00 37.19 4.30
566 567 2.099098 CCTTCTCTTTCGAGCTCTCTCC 59.901 54.545 12.85 0.00 37.19 3.71
567 568 3.013921 TCCTTCTCTTTCGAGCTCTCTC 58.986 50.000 12.85 0.00 37.19 3.20
568 569 3.016736 CTCCTTCTCTTTCGAGCTCTCT 58.983 50.000 12.85 0.00 37.19 3.10
569 570 3.013921 TCTCCTTCTCTTTCGAGCTCTC 58.986 50.000 12.85 0.00 37.19 3.20
570 571 3.080300 TCTCCTTCTCTTTCGAGCTCT 57.920 47.619 12.85 0.00 37.19 4.09
571 572 3.705604 CATCTCCTTCTCTTTCGAGCTC 58.294 50.000 2.73 2.73 37.19 4.09
572 573 2.159114 GCATCTCCTTCTCTTTCGAGCT 60.159 50.000 0.00 0.00 37.19 4.09
573 574 2.200899 GCATCTCCTTCTCTTTCGAGC 58.799 52.381 0.00 0.00 37.19 5.03
574 575 3.130164 TCTGCATCTCCTTCTCTTTCGAG 59.870 47.826 0.00 0.00 38.67 4.04
575 576 3.092301 TCTGCATCTCCTTCTCTTTCGA 58.908 45.455 0.00 0.00 0.00 3.71
576 577 3.516981 TCTGCATCTCCTTCTCTTTCG 57.483 47.619 0.00 0.00 0.00 3.46
577 578 3.622612 GCTTCTGCATCTCCTTCTCTTTC 59.377 47.826 0.00 0.00 39.41 2.62
578 579 3.008813 TGCTTCTGCATCTCCTTCTCTTT 59.991 43.478 0.00 0.00 45.31 2.52
579 580 2.570752 TGCTTCTGCATCTCCTTCTCTT 59.429 45.455 0.00 0.00 45.31 2.85
580 581 2.186243 TGCTTCTGCATCTCCTTCTCT 58.814 47.619 0.00 0.00 45.31 3.10
581 582 2.687700 TGCTTCTGCATCTCCTTCTC 57.312 50.000 0.00 0.00 45.31 2.87
592 593 1.246056 TTGATGTGGCCTGCTTCTGC 61.246 55.000 3.32 0.00 40.20 4.26
593 594 1.471119 ATTGATGTGGCCTGCTTCTG 58.529 50.000 3.32 0.00 0.00 3.02
594 595 1.822990 CAATTGATGTGGCCTGCTTCT 59.177 47.619 3.32 0.00 0.00 2.85
595 596 1.820519 TCAATTGATGTGGCCTGCTTC 59.179 47.619 3.38 5.61 0.00 3.86
596 597 1.822990 CTCAATTGATGTGGCCTGCTT 59.177 47.619 8.96 0.00 0.00 3.91
597 598 1.005097 TCTCAATTGATGTGGCCTGCT 59.995 47.619 8.96 0.00 0.00 4.24
598 599 1.466856 TCTCAATTGATGTGGCCTGC 58.533 50.000 8.96 0.00 0.00 4.85
599 600 4.158949 TGAAATCTCAATTGATGTGGCCTG 59.841 41.667 8.96 0.00 0.00 4.85
600 601 4.346730 TGAAATCTCAATTGATGTGGCCT 58.653 39.130 8.96 0.00 0.00 5.19
601 602 4.400251 TCTGAAATCTCAATTGATGTGGCC 59.600 41.667 8.96 0.00 0.00 5.36
602 603 5.106038 TGTCTGAAATCTCAATTGATGTGGC 60.106 40.000 8.96 0.04 0.00 5.01
603 604 6.505044 TGTCTGAAATCTCAATTGATGTGG 57.495 37.500 8.96 0.00 0.00 4.17
604 605 7.194278 GGATGTCTGAAATCTCAATTGATGTG 58.806 38.462 8.96 0.00 0.00 3.21
605 606 6.320672 GGGATGTCTGAAATCTCAATTGATGT 59.679 38.462 8.96 0.00 0.00 3.06
606 607 6.320418 TGGGATGTCTGAAATCTCAATTGATG 59.680 38.462 7.96 3.70 31.52 3.07
607 608 6.429151 TGGGATGTCTGAAATCTCAATTGAT 58.571 36.000 7.96 0.00 31.52 2.57
608 609 5.818887 TGGGATGTCTGAAATCTCAATTGA 58.181 37.500 7.96 8.12 31.52 2.57
609 610 6.152323 AGTTGGGATGTCTGAAATCTCAATTG 59.848 38.462 22.57 0.00 44.26 2.32
610 611 6.251471 AGTTGGGATGTCTGAAATCTCAATT 58.749 36.000 22.57 17.06 44.26 2.32
611 612 5.824421 AGTTGGGATGTCTGAAATCTCAAT 58.176 37.500 22.57 11.35 44.26 2.57
612 613 5.013495 AGAGTTGGGATGTCTGAAATCTCAA 59.987 40.000 17.31 17.31 41.21 3.02
613 614 4.533707 AGAGTTGGGATGTCTGAAATCTCA 59.466 41.667 6.29 6.29 32.62 3.27
614 615 5.096443 AGAGTTGGGATGTCTGAAATCTC 57.904 43.478 7.72 4.28 0.00 2.75
615 616 4.782156 AGAGAGTTGGGATGTCTGAAATCT 59.218 41.667 7.72 0.00 0.00 2.40
616 617 5.096443 AGAGAGTTGGGATGTCTGAAATC 57.904 43.478 0.00 0.00 0.00 2.17
617 618 6.385176 TCATAGAGAGTTGGGATGTCTGAAAT 59.615 38.462 0.00 0.00 0.00 2.17
618 619 5.721480 TCATAGAGAGTTGGGATGTCTGAAA 59.279 40.000 0.00 0.00 0.00 2.69
619 620 5.272402 TCATAGAGAGTTGGGATGTCTGAA 58.728 41.667 0.00 0.00 0.00 3.02
620 621 4.871822 TCATAGAGAGTTGGGATGTCTGA 58.128 43.478 0.00 0.00 0.00 3.27
621 622 5.128499 AGTTCATAGAGAGTTGGGATGTCTG 59.872 44.000 0.00 0.00 0.00 3.51
622 623 5.276440 AGTTCATAGAGAGTTGGGATGTCT 58.724 41.667 0.00 0.00 0.00 3.41
623 624 5.606348 AGTTCATAGAGAGTTGGGATGTC 57.394 43.478 0.00 0.00 0.00 3.06
624 625 5.723887 AGAAGTTCATAGAGAGTTGGGATGT 59.276 40.000 5.50 0.00 0.00 3.06
625 626 6.098124 AGAGAAGTTCATAGAGAGTTGGGATG 59.902 42.308 5.50 0.00 0.00 3.51
626 627 6.201591 AGAGAAGTTCATAGAGAGTTGGGAT 58.798 40.000 5.50 0.00 0.00 3.85
627 628 5.584913 AGAGAAGTTCATAGAGAGTTGGGA 58.415 41.667 5.50 0.00 0.00 4.37
628 629 5.163457 GGAGAGAAGTTCATAGAGAGTTGGG 60.163 48.000 5.50 0.00 0.00 4.12
629 630 5.420421 TGGAGAGAAGTTCATAGAGAGTTGG 59.580 44.000 5.50 0.00 0.00 3.77
630 631 6.152661 AGTGGAGAGAAGTTCATAGAGAGTTG 59.847 42.308 5.50 0.00 0.00 3.16
631 632 6.252995 AGTGGAGAGAAGTTCATAGAGAGTT 58.747 40.000 5.50 0.00 0.00 3.01
632 633 5.826643 AGTGGAGAGAAGTTCATAGAGAGT 58.173 41.667 5.50 0.00 0.00 3.24
633 634 6.183360 GGAAGTGGAGAGAAGTTCATAGAGAG 60.183 46.154 5.50 0.00 0.00 3.20
634 635 5.654650 GGAAGTGGAGAGAAGTTCATAGAGA 59.345 44.000 5.50 0.00 0.00 3.10
635 636 5.656416 AGGAAGTGGAGAGAAGTTCATAGAG 59.344 44.000 5.50 0.00 0.00 2.43
636 637 5.584913 AGGAAGTGGAGAGAAGTTCATAGA 58.415 41.667 5.50 0.00 0.00 1.98
637 638 5.930837 AGGAAGTGGAGAGAAGTTCATAG 57.069 43.478 5.50 0.00 0.00 2.23
638 639 5.187967 GGAAGGAAGTGGAGAGAAGTTCATA 59.812 44.000 5.50 0.00 0.00 2.15
639 640 4.019771 GGAAGGAAGTGGAGAGAAGTTCAT 60.020 45.833 5.50 0.00 0.00 2.57
640 641 3.325135 GGAAGGAAGTGGAGAGAAGTTCA 59.675 47.826 5.50 0.00 0.00 3.18
641 642 3.580895 AGGAAGGAAGTGGAGAGAAGTTC 59.419 47.826 0.00 0.00 0.00 3.01
642 643 3.592865 AGGAAGGAAGTGGAGAGAAGTT 58.407 45.455 0.00 0.00 0.00 2.66
643 644 3.268034 AGGAAGGAAGTGGAGAGAAGT 57.732 47.619 0.00 0.00 0.00 3.01
644 645 4.090090 TGTAGGAAGGAAGTGGAGAGAAG 58.910 47.826 0.00 0.00 0.00 2.85
645 646 4.127918 TGTAGGAAGGAAGTGGAGAGAA 57.872 45.455 0.00 0.00 0.00 2.87
646 647 3.827817 TGTAGGAAGGAAGTGGAGAGA 57.172 47.619 0.00 0.00 0.00 3.10
647 648 4.570930 GTTTGTAGGAAGGAAGTGGAGAG 58.429 47.826 0.00 0.00 0.00 3.20
648 649 3.006537 CGTTTGTAGGAAGGAAGTGGAGA 59.993 47.826 0.00 0.00 0.00 3.71
649 650 3.326747 CGTTTGTAGGAAGGAAGTGGAG 58.673 50.000 0.00 0.00 0.00 3.86
650 651 2.038033 CCGTTTGTAGGAAGGAAGTGGA 59.962 50.000 0.00 0.00 0.00 4.02
651 652 2.038033 TCCGTTTGTAGGAAGGAAGTGG 59.962 50.000 0.00 0.00 34.33 4.00
652 653 3.396260 TCCGTTTGTAGGAAGGAAGTG 57.604 47.619 0.00 0.00 34.33 3.16
653 654 3.055312 GGATCCGTTTGTAGGAAGGAAGT 60.055 47.826 0.00 0.00 41.69 3.01
654 655 3.197983 AGGATCCGTTTGTAGGAAGGAAG 59.802 47.826 5.98 0.00 41.69 3.46
655 656 3.178865 AGGATCCGTTTGTAGGAAGGAA 58.821 45.455 5.98 0.00 41.69 3.36
656 657 2.829023 AGGATCCGTTTGTAGGAAGGA 58.171 47.619 5.98 0.00 41.69 3.36
657 658 4.957684 ATAGGATCCGTTTGTAGGAAGG 57.042 45.455 5.98 0.00 41.69 3.46
658 659 4.511826 GCAATAGGATCCGTTTGTAGGAAG 59.488 45.833 22.75 5.42 41.69 3.46
659 660 4.163458 AGCAATAGGATCCGTTTGTAGGAA 59.837 41.667 22.75 0.00 41.69 3.36
660 661 3.709653 AGCAATAGGATCCGTTTGTAGGA 59.290 43.478 22.75 0.00 42.69 2.94
661 662 4.073293 AGCAATAGGATCCGTTTGTAGG 57.927 45.455 22.75 7.03 0.00 3.18
662 663 4.260784 GCAAGCAATAGGATCCGTTTGTAG 60.261 45.833 22.75 16.26 0.00 2.74
663 664 3.625764 GCAAGCAATAGGATCCGTTTGTA 59.374 43.478 22.75 5.98 0.00 2.41
664 665 2.423538 GCAAGCAATAGGATCCGTTTGT 59.576 45.455 22.75 12.18 0.00 2.83
665 666 2.423185 TGCAAGCAATAGGATCCGTTTG 59.577 45.455 19.66 19.66 0.00 2.93
666 667 2.684881 CTGCAAGCAATAGGATCCGTTT 59.315 45.455 5.98 0.87 0.00 3.60
675 676 6.122850 TGCAATACTTACTGCAAGCAATAG 57.877 37.500 0.00 0.00 45.25 1.73
684 685 7.689400 GCATTTTCATTTTGCAATACTTACTGC 59.311 33.333 0.00 0.65 39.09 4.40
686 687 8.830201 TGCATTTTCATTTTGCAATACTTACT 57.170 26.923 0.00 0.00 42.95 2.24
697 698 4.083961 TGGACGCATTGCATTTTCATTTTG 60.084 37.500 9.69 0.00 0.00 2.44
703 704 2.195922 GGATGGACGCATTGCATTTTC 58.804 47.619 9.69 0.00 36.16 2.29
704 705 1.549620 TGGATGGACGCATTGCATTTT 59.450 42.857 9.69 0.00 36.16 1.82
709 710 0.379669 CTTCTGGATGGACGCATTGC 59.620 55.000 0.00 0.00 0.00 3.56
714 715 0.955428 TGTTGCTTCTGGATGGACGC 60.955 55.000 0.00 0.00 0.00 5.19
721 722 0.319900 GAGTCGCTGTTGCTTCTGGA 60.320 55.000 0.00 0.00 36.97 3.86
722 723 1.621301 CGAGTCGCTGTTGCTTCTGG 61.621 60.000 0.00 0.00 36.97 3.86
769 770 4.015084 AGCCATTTGGATCTTCTTCTGTG 58.985 43.478 0.00 0.00 37.39 3.66
770 771 4.268359 GAGCCATTTGGATCTTCTTCTGT 58.732 43.478 7.59 0.00 46.53 3.41
853 869 2.561037 TTGGTCAGTGAGCGAGCGA 61.561 57.895 17.03 0.00 33.56 4.93
918 935 0.251832 GAGGAGGGAGTGTGGTGAGA 60.252 60.000 0.00 0.00 0.00 3.27
1610 1639 0.896940 AAGCTCGTTGTACCCCTCGA 60.897 55.000 0.00 0.00 0.00 4.04
1614 1643 0.672711 GGTCAAGCTCGTTGTACCCC 60.673 60.000 0.00 0.00 37.43 4.95
1932 1967 0.528466 CCGTGATCACCGACATGGAG 60.528 60.000 20.03 2.63 43.47 3.86
2296 2331 1.658095 GAAGATGAAGAGCGTGCTGAC 59.342 52.381 0.00 0.00 0.00 3.51
2777 2815 2.270205 CCGCCTTCTCACCAGCAT 59.730 61.111 0.00 0.00 0.00 3.79
2814 2852 4.593864 CCCGCGCTAGCCTTCTCC 62.594 72.222 9.66 0.00 41.18 3.71
2835 2873 1.207329 GGACATCTTTAGCGACCACCT 59.793 52.381 0.00 0.00 0.00 4.00
2841 2879 1.404391 GACTCCGGACATCTTTAGCGA 59.596 52.381 0.00 0.00 0.00 4.93
2897 2936 8.618677 CAACGTATAGTCAAGGAGTGATTACTA 58.381 37.037 0.00 0.00 38.90 1.82
2908 2947 6.645415 AGTTTTCAGACAACGTATAGTCAAGG 59.355 38.462 15.29 6.95 37.23 3.61
2956 2995 8.826765 TGTAGATAAAAAGTCTTCTCCCATTCT 58.173 33.333 0.00 0.00 0.00 2.40
2962 3001 9.274206 ACTTTGTGTAGATAAAAAGTCTTCTCC 57.726 33.333 0.00 0.00 38.19 3.71
2985 3024 8.398665 GTGAGTACAAAACAAAGATCAAGACTT 58.601 33.333 0.00 0.00 0.00 3.01
3084 3144 7.305820 CGAGCAAAATGAGTGAAATATGCATTC 60.306 37.037 3.54 0.00 35.11 2.67
3091 3151 4.092821 CGGACGAGCAAAATGAGTGAAATA 59.907 41.667 0.00 0.00 0.00 1.40
3093 3153 2.223144 CGGACGAGCAAAATGAGTGAAA 59.777 45.455 0.00 0.00 0.00 2.69
3110 3170 2.678336 CCTTTAGGATTTCAGTGCGGAC 59.322 50.000 0.00 0.00 37.39 4.79
3127 3187 7.942894 CCTCCGTTCCTAAATATAAATCCCTTT 59.057 37.037 0.00 0.00 0.00 3.11
3144 3204 2.232941 TGTACATCACTTCCTCCGTTCC 59.767 50.000 0.00 0.00 0.00 3.62
3148 3208 3.190079 CACATGTACATCACTTCCTCCG 58.810 50.000 5.07 0.00 0.00 4.63
3170 3230 1.083806 TTGCTCATTACCAGCGCGAG 61.084 55.000 12.10 0.00 40.01 5.03
3171 3231 0.461870 ATTGCTCATTACCAGCGCGA 60.462 50.000 12.10 0.00 40.01 5.87
3208 3268 9.979578 ATTGCACAAATAACAAGTTTTCAGATA 57.020 25.926 0.00 0.00 0.00 1.98
3211 3271 9.462174 TCTATTGCACAAATAACAAGTTTTCAG 57.538 29.630 0.00 0.00 30.24 3.02
3282 3342 3.802866 CTCACAAATAGAGCCTCCCTTC 58.197 50.000 0.00 0.00 0.00 3.46
3299 3359 4.266265 GCAACTGTTTCTTTTTCAGCTCAC 59.734 41.667 0.00 0.00 33.12 3.51
3360 3420 8.775884 CGATGAACAGTAACACGATTTATTTTG 58.224 33.333 0.00 0.00 0.00 2.44
3367 3427 4.806330 AGACGATGAACAGTAACACGATT 58.194 39.130 0.00 0.00 0.00 3.34
3372 3432 4.866508 AGGAAGACGATGAACAGTAACA 57.133 40.909 0.00 0.00 0.00 2.41
3374 3434 4.527038 AGGAAGGAAGACGATGAACAGTAA 59.473 41.667 0.00 0.00 0.00 2.24
3394 3454 3.312890 GGATGAGGATGAGGAAGAAGGA 58.687 50.000 0.00 0.00 0.00 3.36
3463 3523 4.025401 GGAAGTGCGTGCCGGTTG 62.025 66.667 1.90 0.00 0.00 3.77
3690 3750 1.851304 GGAGATTTTCATGGGTGGCA 58.149 50.000 0.00 0.00 0.00 4.92
3692 3752 1.340991 ACCGGAGATTTTCATGGGTGG 60.341 52.381 9.46 0.00 0.00 4.61
3727 3787 5.350547 CCCATTATCTATCTTAGGGGTGGA 58.649 45.833 0.00 0.00 0.00 4.02
3743 3803 4.349930 ACGGTGAAGTAATAGCCCCATTAT 59.650 41.667 0.00 0.00 0.00 1.28
3744 3804 3.712733 ACGGTGAAGTAATAGCCCCATTA 59.287 43.478 0.00 0.00 0.00 1.90
3745 3805 2.508300 ACGGTGAAGTAATAGCCCCATT 59.492 45.455 0.00 0.00 0.00 3.16
3808 3868 2.105477 CCTATTGGATGGACCTCACTGG 59.895 54.545 0.00 0.00 39.86 4.00
3809 3869 2.105477 CCCTATTGGATGGACCTCACTG 59.895 54.545 0.00 0.00 39.86 3.66
3810 3870 2.022035 TCCCTATTGGATGGACCTCACT 60.022 50.000 0.00 0.00 38.61 3.41
3811 3871 2.408565 TCCCTATTGGATGGACCTCAC 58.591 52.381 0.00 0.00 38.61 3.51
3812 3872 2.887454 TCCCTATTGGATGGACCTCA 57.113 50.000 0.00 0.00 38.61 3.86
3813 3873 3.778954 CTTCCCTATTGGATGGACCTC 57.221 52.381 0.00 0.00 44.66 3.85
3819 3879 4.413520 TCCTTCTTCCTTCCCTATTGGATG 59.586 45.833 0.00 0.00 44.66 3.51
3820 3880 4.646157 TCCTTCTTCCTTCCCTATTGGAT 58.354 43.478 0.00 0.00 44.66 3.41
3821 3881 4.088634 TCCTTCTTCCTTCCCTATTGGA 57.911 45.455 0.00 0.00 43.18 3.53
3822 3882 4.862641 TTCCTTCTTCCTTCCCTATTGG 57.137 45.455 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.