Multiple sequence alignment - TraesCS3D01G146200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G146200 chr3D 100.000 5635 0 0 1 5635 110246514 110240880 0.000000e+00 10406.0
1 TraesCS3D01G146200 chr3D 96.660 539 17 1 5097 5635 398552458 398552995 0.000000e+00 894.0
2 TraesCS3D01G146200 chr3D 96.475 539 19 0 5097 5635 165758330 165757792 0.000000e+00 891.0
3 TraesCS3D01G146200 chr3D 96.317 543 19 1 5094 5635 170778232 170778774 0.000000e+00 891.0
4 TraesCS3D01G146200 chr3D 82.547 424 40 15 4674 5092 488878552 488878158 5.410000e-90 342.0
5 TraesCS3D01G146200 chr3D 86.333 300 35 4 1970 2265 110220780 110220483 7.040000e-84 322.0
6 TraesCS3D01G146200 chr3D 81.971 416 42 14 4681 5092 162037224 162036838 7.040000e-84 322.0
7 TraesCS3D01G146200 chr3D 90.099 202 20 0 4256 4457 110220002 110219801 4.330000e-66 263.0
8 TraesCS3D01G146200 chr3D 86.395 147 20 0 1134 1280 360396771 360396917 1.620000e-35 161.0
9 TraesCS3D01G146200 chr3D 89.333 75 8 0 1215 1289 109967722 109967648 1.670000e-15 95.3
10 TraesCS3D01G146200 chr3D 91.667 60 4 1 5034 5092 110227177 110227118 1.300000e-11 82.4
11 TraesCS3D01G146200 chr3B 92.149 2955 123 40 668 3571 161378803 161375907 0.000000e+00 4071.0
12 TraesCS3D01G146200 chr3B 91.163 1109 50 27 3569 4659 161375794 161374716 0.000000e+00 1461.0
13 TraesCS3D01G146200 chr3B 93.447 412 23 1 4681 5092 365496230 365496637 4.830000e-170 608.0
14 TraesCS3D01G146200 chr3B 88.372 215 25 0 4243 4457 161301488 161301274 5.600000e-65 259.0
15 TraesCS3D01G146200 chr3B 86.395 147 20 0 1134 1280 466297167 466297313 1.620000e-35 161.0
16 TraesCS3D01G146200 chr3B 91.667 60 4 1 5034 5092 365496753 365496812 1.300000e-11 82.4
17 TraesCS3D01G146200 chr3A 91.505 1495 58 26 730 2192 120223175 120224632 0.000000e+00 1993.0
18 TraesCS3D01G146200 chr3A 81.448 884 89 27 3135 3959 120225660 120226527 0.000000e+00 654.0
19 TraesCS3D01G146200 chr3A 82.823 751 79 18 3245 3959 117351728 117350992 1.330000e-175 627.0
20 TraesCS3D01G146200 chr3A 84.640 625 52 27 4045 4634 120226611 120227226 2.930000e-162 582.0
21 TraesCS3D01G146200 chr3A 84.219 602 66 21 2524 3107 120225001 120225591 4.930000e-155 558.0
22 TraesCS3D01G146200 chr3A 88.571 280 26 4 1 277 660427065 660426789 9.050000e-88 335.0
23 TraesCS3D01G146200 chr3A 87.586 290 31 3 1969 2254 120267551 120267839 1.170000e-86 331.0
24 TraesCS3D01G146200 chr3A 87.547 265 21 5 3702 3959 181051215 181050956 4.270000e-76 296.0
25 TraesCS3D01G146200 chr3A 81.870 353 47 8 3245 3584 181051571 181051223 1.200000e-71 281.0
26 TraesCS3D01G146200 chr3A 78.889 450 60 13 3245 3664 714099751 714100195 7.190000e-69 272.0
27 TraesCS3D01G146200 chr3A 88.991 218 24 0 4240 4457 120268289 120268506 2.590000e-68 270.0
28 TraesCS3D01G146200 chr3A 86.957 184 24 0 1107 1290 120266418 120266601 2.060000e-49 207.0
29 TraesCS3D01G146200 chr3A 86.395 147 20 0 1134 1280 479781190 479781336 1.620000e-35 161.0
30 TraesCS3D01G146200 chr3A 79.144 187 25 11 1415 1594 479781458 479781637 3.570000e-22 117.0
31 TraesCS3D01G146200 chr4D 97.032 539 16 0 5097 5635 54221635 54222173 0.000000e+00 907.0
32 TraesCS3D01G146200 chr4D 96.481 540 18 1 5096 5635 26278388 26277850 0.000000e+00 891.0
33 TraesCS3D01G146200 chr4D 96.475 539 19 0 5097 5635 455067384 455066846 0.000000e+00 891.0
34 TraesCS3D01G146200 chr1D 97.032 539 16 0 5097 5635 479166138 479165600 0.000000e+00 907.0
35 TraesCS3D01G146200 chr1D 96.852 540 16 1 5097 5635 458868003 458867464 0.000000e+00 902.0
36 TraesCS3D01G146200 chr1D 96.481 540 18 1 5097 5635 481530024 481529485 0.000000e+00 891.0
37 TraesCS3D01G146200 chr1D 89.324 281 25 2 1 278 49965061 49965339 1.160000e-91 348.0
38 TraesCS3D01G146200 chr1D 76.608 171 38 2 1121 1290 414775692 414775861 6.010000e-15 93.5
39 TraesCS3D01G146200 chr1D 87.013 77 8 2 1214 1289 77337596 77337521 1.010000e-12 86.1
40 TraesCS3D01G146200 chr1D 90.909 55 5 0 1744 1798 414776181 414776235 2.180000e-09 75.0
41 TraesCS3D01G146200 chr1A 83.089 751 78 20 3245 3959 6713212 6712475 6.160000e-179 638.0
42 TraesCS3D01G146200 chr1A 77.059 170 39 0 1121 1290 511500081 511500250 1.290000e-16 99.0
43 TraesCS3D01G146200 chr1A 85.714 77 9 2 1214 1289 108444284 108444209 4.680000e-11 80.5
44 TraesCS3D01G146200 chr1A 90.909 55 5 0 1744 1798 511500570 511500624 2.180000e-09 75.0
45 TraesCS3D01G146200 chr6A 82.557 751 81 18 3245 3959 41222021 41221285 2.880000e-172 616.0
46 TraesCS3D01G146200 chr6A 82.915 398 37 8 4681 5069 53499998 53499623 4.210000e-86 329.0
47 TraesCS3D01G146200 chr6A 88.079 151 8 3 4678 4828 65764134 65764274 2.700000e-38 171.0
48 TraesCS3D01G146200 chr5A 82.361 754 78 25 3245 3959 89312543 89311806 6.240000e-169 604.0
49 TraesCS3D01G146200 chr5A 91.885 382 29 2 288 667 358965503 358965122 2.990000e-147 532.0
50 TraesCS3D01G146200 chr5A 91.885 382 28 3 288 667 266516297 266516677 1.070000e-146 531.0
51 TraesCS3D01G146200 chr5A 80.226 354 53 8 3245 3585 150025243 150024894 3.370000e-62 250.0
52 TraesCS3D01G146200 chr5A 89.610 77 8 0 1214 1290 495028718 495028642 1.290000e-16 99.0
53 TraesCS3D01G146200 chr7B 91.969 386 26 5 288 670 603835189 603834806 2.310000e-148 536.0
54 TraesCS3D01G146200 chr7B 91.885 382 27 4 288 667 448654558 448654937 1.070000e-146 531.0
55 TraesCS3D01G146200 chr7B 85.638 188 27 0 1106 1293 437673159 437672972 1.240000e-46 198.0
56 TraesCS3D01G146200 chr7B 80.105 191 28 8 1106 1287 7358078 7357889 3.540000e-27 134.0
57 TraesCS3D01G146200 chr7B 79.781 183 35 2 1415 1596 437672893 437672712 1.270000e-26 132.0
58 TraesCS3D01G146200 chr7B 78.195 133 25 4 1481 1611 439417400 439417530 1.300000e-11 82.4
59 TraesCS3D01G146200 chr6B 91.237 388 29 5 281 665 131667272 131666887 1.800000e-144 523.0
60 TraesCS3D01G146200 chr6B 91.099 382 30 2 288 667 28743613 28743234 1.080000e-141 514.0
61 TraesCS3D01G146200 chr5B 91.361 382 30 3 288 668 493518705 493518326 2.330000e-143 520.0
62 TraesCS3D01G146200 chr5B 91.146 384 31 3 287 668 613612953 613613335 8.370000e-143 518.0
63 TraesCS3D01G146200 chr1B 91.339 381 29 3 288 665 365476040 365476419 8.370000e-143 518.0
64 TraesCS3D01G146200 chr1B 77.647 170 38 0 1121 1290 560251496 560251665 2.780000e-18 104.0
65 TraesCS3D01G146200 chr1B 88.312 77 7 2 1214 1289 120469823 120469748 2.160000e-14 91.6
66 TraesCS3D01G146200 chr1B 90.909 55 5 0 1744 1798 560251983 560252037 2.180000e-09 75.0
67 TraesCS3D01G146200 chr7D 93.141 277 17 1 1 277 365263714 365263440 6.800000e-109 405.0
68 TraesCS3D01G146200 chr7D 86.170 188 26 0 1106 1293 421410253 421410066 2.660000e-48 204.0
69 TraesCS3D01G146200 chr7D 79.558 181 35 2 1415 1594 421409987 421409808 1.650000e-25 128.0
70 TraesCS3D01G146200 chr7D 77.005 187 33 8 1430 1611 421792166 421791985 1.290000e-16 99.0
71 TraesCS3D01G146200 chr2D 90.647 278 22 3 1 277 513114700 513114426 3.210000e-97 366.0
72 TraesCS3D01G146200 chr2D 88.652 282 22 5 4 278 591441935 591441657 9.050000e-88 335.0
73 TraesCS3D01G146200 chr2D 87.805 82 10 0 1210 1291 92891739 92891820 4.650000e-16 97.1
74 TraesCS3D01G146200 chr2D 84.946 93 12 2 1209 1300 92882338 92882429 6.010000e-15 93.5
75 TraesCS3D01G146200 chr2D 100.000 30 0 0 1750 1779 627915268 627915239 7.890000e-04 56.5
76 TraesCS3D01G146200 chr5D 83.452 423 37 14 4674 5092 337222859 337222466 4.150000e-96 363.0
77 TraesCS3D01G146200 chr5D 89.668 271 25 2 1 271 72202022 72202289 5.410000e-90 342.0
78 TraesCS3D01G146200 chr5D 88.256 281 22 4 1 278 9102229 9102501 5.440000e-85 326.0
79 TraesCS3D01G146200 chr5D 86.842 76 10 0 1215 1290 391854910 391854835 1.010000e-12 86.1
80 TraesCS3D01G146200 chr5D 92.683 41 3 0 1243 1283 546924356 546924316 6.100000e-05 60.2
81 TraesCS3D01G146200 chr4A 89.931 288 16 6 1 277 637854248 637854533 5.370000e-95 359.0
82 TraesCS3D01G146200 chr4A 87.342 316 27 6 3652 3959 100152344 100152034 3.230000e-92 350.0
83 TraesCS3D01G146200 chr4A 87.900 281 27 5 1 277 300529364 300529087 1.960000e-84 324.0
84 TraesCS3D01G146200 chr7A 82.201 309 29 13 4788 5092 3790908 3791194 5.640000e-60 243.0
85 TraesCS3D01G146200 chr7A 85.638 188 27 0 1106 1293 511714207 511714394 1.240000e-46 198.0
86 TraesCS3D01G146200 chr7A 78.378 222 33 13 1078 1287 69974753 69974971 4.580000e-26 130.0
87 TraesCS3D01G146200 chr7A 79.235 183 36 2 1415 1596 511714473 511714654 5.930000e-25 126.0
88 TraesCS3D01G146200 chr6D 77.857 420 40 18 4677 5092 77678740 77678370 1.590000e-50 211.0
89 TraesCS3D01G146200 chrUn 77.901 181 37 3 1111 1290 84040059 84039881 5.970000e-20 110.0
90 TraesCS3D01G146200 chr2B 89.873 79 8 0 1213 1291 144034523 144034601 9.990000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G146200 chr3D 110240880 110246514 5634 True 10406.000000 10406 100.000000 1 5635 1 chr3D.!!$R3 5634
1 TraesCS3D01G146200 chr3D 398552458 398552995 537 False 894.000000 894 96.660000 5097 5635 1 chr3D.!!$F3 538
2 TraesCS3D01G146200 chr3D 165757792 165758330 538 True 891.000000 891 96.475000 5097 5635 1 chr3D.!!$R5 538
3 TraesCS3D01G146200 chr3D 170778232 170778774 542 False 891.000000 891 96.317000 5094 5635 1 chr3D.!!$F1 541
4 TraesCS3D01G146200 chr3D 110219801 110220780 979 True 292.500000 322 88.216000 1970 4457 2 chr3D.!!$R7 2487
5 TraesCS3D01G146200 chr3B 161374716 161378803 4087 True 2766.000000 4071 91.656000 668 4659 2 chr3B.!!$R2 3991
6 TraesCS3D01G146200 chr3B 365496230 365496812 582 False 345.200000 608 92.557000 4681 5092 2 chr3B.!!$F2 411
7 TraesCS3D01G146200 chr3A 120223175 120227226 4051 False 946.750000 1993 85.453000 730 4634 4 chr3A.!!$F2 3904
8 TraesCS3D01G146200 chr3A 117350992 117351728 736 True 627.000000 627 82.823000 3245 3959 1 chr3A.!!$R1 714
9 TraesCS3D01G146200 chr3A 181050956 181051571 615 True 288.500000 296 84.708500 3245 3959 2 chr3A.!!$R3 714
10 TraesCS3D01G146200 chr3A 120266418 120268506 2088 False 269.333333 331 87.844667 1107 4457 3 chr3A.!!$F3 3350
11 TraesCS3D01G146200 chr4D 54221635 54222173 538 False 907.000000 907 97.032000 5097 5635 1 chr4D.!!$F1 538
12 TraesCS3D01G146200 chr4D 26277850 26278388 538 True 891.000000 891 96.481000 5096 5635 1 chr4D.!!$R1 539
13 TraesCS3D01G146200 chr4D 455066846 455067384 538 True 891.000000 891 96.475000 5097 5635 1 chr4D.!!$R2 538
14 TraesCS3D01G146200 chr1D 479165600 479166138 538 True 907.000000 907 97.032000 5097 5635 1 chr1D.!!$R3 538
15 TraesCS3D01G146200 chr1D 458867464 458868003 539 True 902.000000 902 96.852000 5097 5635 1 chr1D.!!$R2 538
16 TraesCS3D01G146200 chr1D 481529485 481530024 539 True 891.000000 891 96.481000 5097 5635 1 chr1D.!!$R4 538
17 TraesCS3D01G146200 chr1A 6712475 6713212 737 True 638.000000 638 83.089000 3245 3959 1 chr1A.!!$R1 714
18 TraesCS3D01G146200 chr6A 41221285 41222021 736 True 616.000000 616 82.557000 3245 3959 1 chr6A.!!$R1 714
19 TraesCS3D01G146200 chr5A 89311806 89312543 737 True 604.000000 604 82.361000 3245 3959 1 chr5A.!!$R1 714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
661 662 0.036306 ACCTAGGAGCCAAAACACCG 59.964 55.0 17.98 0.0 0.00 4.94 F
665 666 0.182775 AGGAGCCAAAACACCGTTCT 59.817 50.0 0.00 0.0 0.00 3.01 F
2341 2689 0.324738 TCTCAGTTCCTCTCCGGCAT 60.325 55.0 0.00 0.0 0.00 4.40 F
3222 3720 0.108472 GGCTAAGCCGAAACCGTAGT 60.108 55.0 0.00 0.0 39.62 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2369 2780 0.239347 ACGAACCGAACTACTCCGTG 59.761 55.0 0.00 0.0 0.0 4.94 R
2375 2786 0.436150 GCCGAAACGAACCGAACTAC 59.564 55.0 0.00 0.0 0.0 2.73 R
3983 4730 0.039618 AAATTGACCGGGCATGGAGT 59.960 50.0 13.08 0.0 0.0 3.85 R
5004 5825 0.040514 TGTTTCGTTGGAGCATTGCG 60.041 50.0 2.38 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.509373 AGAGTAGAGGTAGAGGCGGA 58.491 55.000 0.00 0.00 0.00 5.54
21 22 1.418637 AGAGTAGAGGTAGAGGCGGAG 59.581 57.143 0.00 0.00 0.00 4.63
22 23 0.475044 AGTAGAGGTAGAGGCGGAGG 59.525 60.000 0.00 0.00 0.00 4.30
23 24 0.473326 GTAGAGGTAGAGGCGGAGGA 59.527 60.000 0.00 0.00 0.00 3.71
24 25 0.766131 TAGAGGTAGAGGCGGAGGAG 59.234 60.000 0.00 0.00 0.00 3.69
25 26 1.529713 GAGGTAGAGGCGGAGGAGG 60.530 68.421 0.00 0.00 0.00 4.30
26 27 3.228017 GGTAGAGGCGGAGGAGGC 61.228 72.222 0.00 0.00 0.00 4.70
83 84 4.570663 CCGCTCGAAGTAGCCGGG 62.571 72.222 2.18 0.00 39.43 5.73
86 87 4.570663 CTCGAAGTAGCCGGGCGG 62.571 72.222 14.39 0.00 38.57 6.13
89 90 4.832608 GAAGTAGCCGGGCGGTGG 62.833 72.222 14.39 0.00 37.65 4.61
118 119 2.973945 GCGGGTTAGCCATATCCTAAG 58.026 52.381 0.15 0.00 36.17 2.18
119 120 2.565834 GCGGGTTAGCCATATCCTAAGA 59.434 50.000 0.15 0.00 36.17 2.10
120 121 3.197983 GCGGGTTAGCCATATCCTAAGAT 59.802 47.826 0.15 0.00 36.17 2.40
121 122 4.680975 GCGGGTTAGCCATATCCTAAGATC 60.681 50.000 0.15 0.00 36.17 2.75
122 123 4.440250 CGGGTTAGCCATATCCTAAGATCG 60.440 50.000 0.15 0.00 36.17 3.69
123 124 4.710375 GGGTTAGCCATATCCTAAGATCGA 59.290 45.833 0.00 0.00 36.17 3.59
124 125 5.187186 GGGTTAGCCATATCCTAAGATCGAA 59.813 44.000 0.00 0.00 36.17 3.71
125 126 6.295688 GGGTTAGCCATATCCTAAGATCGAAA 60.296 42.308 0.00 0.00 36.17 3.46
126 127 7.159372 GGTTAGCCATATCCTAAGATCGAAAA 58.841 38.462 0.00 0.00 32.40 2.29
127 128 7.824779 GGTTAGCCATATCCTAAGATCGAAAAT 59.175 37.037 0.00 0.00 32.40 1.82
128 129 8.874816 GTTAGCCATATCCTAAGATCGAAAATC 58.125 37.037 0.00 0.00 33.67 2.17
129 130 7.251321 AGCCATATCCTAAGATCGAAAATCT 57.749 36.000 0.00 0.00 33.67 2.40
130 131 7.102346 AGCCATATCCTAAGATCGAAAATCTG 58.898 38.462 0.00 0.00 33.67 2.90
131 132 7.038729 AGCCATATCCTAAGATCGAAAATCTGA 60.039 37.037 0.00 0.00 33.67 3.27
132 133 7.768120 GCCATATCCTAAGATCGAAAATCTGAT 59.232 37.037 0.00 0.00 33.67 2.90
136 137 6.994221 TCCTAAGATCGAAAATCTGATACCC 58.006 40.000 0.00 0.00 0.00 3.69
137 138 6.782988 TCCTAAGATCGAAAATCTGATACCCT 59.217 38.462 0.00 0.00 0.00 4.34
138 139 6.870965 CCTAAGATCGAAAATCTGATACCCTG 59.129 42.308 0.00 0.00 0.00 4.45
139 140 5.878406 AGATCGAAAATCTGATACCCTGT 57.122 39.130 0.00 0.00 0.00 4.00
140 141 6.978674 AGATCGAAAATCTGATACCCTGTA 57.021 37.500 0.00 0.00 0.00 2.74
141 142 6.987386 AGATCGAAAATCTGATACCCTGTAG 58.013 40.000 0.00 0.00 0.00 2.74
142 143 6.778069 AGATCGAAAATCTGATACCCTGTAGA 59.222 38.462 0.00 0.00 0.00 2.59
143 144 6.785337 TCGAAAATCTGATACCCTGTAGAA 57.215 37.500 0.00 0.00 0.00 2.10
144 145 7.361457 TCGAAAATCTGATACCCTGTAGAAT 57.639 36.000 0.00 0.00 0.00 2.40
145 146 7.792032 TCGAAAATCTGATACCCTGTAGAATT 58.208 34.615 0.00 0.00 0.00 2.17
146 147 7.710907 TCGAAAATCTGATACCCTGTAGAATTG 59.289 37.037 0.00 0.00 0.00 2.32
147 148 7.495934 CGAAAATCTGATACCCTGTAGAATTGT 59.504 37.037 0.00 0.00 0.00 2.71
148 149 9.832445 GAAAATCTGATACCCTGTAGAATTGTA 57.168 33.333 0.00 0.00 0.00 2.41
151 152 9.784531 AATCTGATACCCTGTAGAATTGTATTG 57.215 33.333 0.00 0.00 0.00 1.90
152 153 8.547481 TCTGATACCCTGTAGAATTGTATTGA 57.453 34.615 0.00 0.00 0.00 2.57
153 154 8.988060 TCTGATACCCTGTAGAATTGTATTGAA 58.012 33.333 0.00 0.00 0.00 2.69
154 155 9.784531 CTGATACCCTGTAGAATTGTATTGAAT 57.215 33.333 0.00 0.00 0.00 2.57
176 177 8.819015 TGAATAATTGTTGATGCAATATTGTGC 58.181 29.630 16.61 4.89 45.15 4.57
177 178 7.718272 ATAATTGTTGATGCAATATTGTGCC 57.282 32.000 16.61 6.71 44.26 5.01
178 179 4.532314 TTGTTGATGCAATATTGTGCCA 57.468 36.364 16.61 6.97 44.26 4.92
179 180 4.112716 TGTTGATGCAATATTGTGCCAG 57.887 40.909 16.61 0.00 44.26 4.85
180 181 3.510753 TGTTGATGCAATATTGTGCCAGT 59.489 39.130 16.61 0.00 44.26 4.00
181 182 4.704057 TGTTGATGCAATATTGTGCCAGTA 59.296 37.500 16.61 3.41 44.26 2.74
182 183 5.360429 TGTTGATGCAATATTGTGCCAGTAT 59.640 36.000 16.61 0.00 44.26 2.12
183 184 6.545298 TGTTGATGCAATATTGTGCCAGTATA 59.455 34.615 16.61 0.00 44.26 1.47
184 185 7.067981 TGTTGATGCAATATTGTGCCAGTATAA 59.932 33.333 16.61 0.00 44.26 0.98
185 186 7.205737 TGATGCAATATTGTGCCAGTATAAG 57.794 36.000 16.61 0.00 44.26 1.73
186 187 6.997476 TGATGCAATATTGTGCCAGTATAAGA 59.003 34.615 16.61 0.00 44.26 2.10
187 188 6.866010 TGCAATATTGTGCCAGTATAAGAG 57.134 37.500 16.61 0.00 44.26 2.85
188 189 5.764686 TGCAATATTGTGCCAGTATAAGAGG 59.235 40.000 16.61 0.00 44.26 3.69
189 190 5.765182 GCAATATTGTGCCAGTATAAGAGGT 59.235 40.000 16.61 0.00 38.66 3.85
190 191 6.934645 GCAATATTGTGCCAGTATAAGAGGTA 59.065 38.462 16.61 0.00 38.66 3.08
191 192 7.607991 GCAATATTGTGCCAGTATAAGAGGTAT 59.392 37.037 16.61 0.00 38.66 2.73
210 211 9.344772 AGAGGTATATATATAAGAGTCAAGCCG 57.655 37.037 3.96 0.00 0.00 5.52
211 212 7.942990 AGGTATATATATAAGAGTCAAGCCGC 58.057 38.462 3.96 0.00 0.00 6.53
212 213 7.560262 AGGTATATATATAAGAGTCAAGCCGCA 59.440 37.037 3.96 0.00 0.00 5.69
213 214 7.648510 GGTATATATATAAGAGTCAAGCCGCAC 59.351 40.741 3.96 0.00 0.00 5.34
214 215 2.596904 TATAAGAGTCAAGCCGCACC 57.403 50.000 0.00 0.00 0.00 5.01
215 216 0.905357 ATAAGAGTCAAGCCGCACCT 59.095 50.000 0.00 0.00 0.00 4.00
216 217 0.037326 TAAGAGTCAAGCCGCACCTG 60.037 55.000 0.00 0.00 0.00 4.00
217 218 1.758440 AAGAGTCAAGCCGCACCTGA 61.758 55.000 0.00 0.00 0.00 3.86
218 219 2.029844 GAGTCAAGCCGCACCTGAC 61.030 63.158 10.66 10.66 0.00 3.51
219 220 3.050275 GTCAAGCCGCACCTGACC 61.050 66.667 8.39 0.00 0.00 4.02
220 221 3.241530 TCAAGCCGCACCTGACCT 61.242 61.111 0.00 0.00 0.00 3.85
221 222 1.911269 TCAAGCCGCACCTGACCTA 60.911 57.895 0.00 0.00 0.00 3.08
222 223 1.448540 CAAGCCGCACCTGACCTAG 60.449 63.158 0.00 0.00 0.00 3.02
223 224 3.316573 AAGCCGCACCTGACCTAGC 62.317 63.158 0.00 0.00 0.00 3.42
224 225 4.840005 GCCGCACCTGACCTAGCC 62.840 72.222 0.00 0.00 0.00 3.93
225 226 4.162690 CCGCACCTGACCTAGCCC 62.163 72.222 0.00 0.00 0.00 5.19
226 227 3.077556 CGCACCTGACCTAGCCCT 61.078 66.667 0.00 0.00 0.00 5.19
227 228 1.756950 CGCACCTGACCTAGCCCTA 60.757 63.158 0.00 0.00 0.00 3.53
228 229 1.115930 CGCACCTGACCTAGCCCTAT 61.116 60.000 0.00 0.00 0.00 2.57
229 230 1.132500 GCACCTGACCTAGCCCTATT 58.868 55.000 0.00 0.00 0.00 1.73
230 231 2.326428 GCACCTGACCTAGCCCTATTA 58.674 52.381 0.00 0.00 0.00 0.98
231 232 2.037381 GCACCTGACCTAGCCCTATTAC 59.963 54.545 0.00 0.00 0.00 1.89
232 233 3.305720 CACCTGACCTAGCCCTATTACA 58.694 50.000 0.00 0.00 0.00 2.41
233 234 3.709653 CACCTGACCTAGCCCTATTACAA 59.290 47.826 0.00 0.00 0.00 2.41
234 235 4.163458 CACCTGACCTAGCCCTATTACAAA 59.837 45.833 0.00 0.00 0.00 2.83
235 236 4.975794 ACCTGACCTAGCCCTATTACAAAT 59.024 41.667 0.00 0.00 0.00 2.32
236 237 5.432060 ACCTGACCTAGCCCTATTACAAATT 59.568 40.000 0.00 0.00 0.00 1.82
237 238 5.765182 CCTGACCTAGCCCTATTACAAATTG 59.235 44.000 0.00 0.00 0.00 2.32
238 239 6.409234 CCTGACCTAGCCCTATTACAAATTGA 60.409 42.308 0.00 0.00 0.00 2.57
239 240 6.591935 TGACCTAGCCCTATTACAAATTGAG 58.408 40.000 0.00 0.00 0.00 3.02
240 241 6.157994 TGACCTAGCCCTATTACAAATTGAGT 59.842 38.462 0.00 0.00 0.00 3.41
241 242 7.346175 TGACCTAGCCCTATTACAAATTGAGTA 59.654 37.037 0.00 0.00 0.00 2.59
242 243 7.736893 ACCTAGCCCTATTACAAATTGAGTAG 58.263 38.462 0.00 0.00 0.00 2.57
243 244 7.162082 CCTAGCCCTATTACAAATTGAGTAGG 58.838 42.308 0.00 7.84 0.00 3.18
244 245 6.824958 AGCCCTATTACAAATTGAGTAGGA 57.175 37.500 17.65 0.00 32.35 2.94
245 246 6.831976 AGCCCTATTACAAATTGAGTAGGAG 58.168 40.000 17.65 11.89 32.35 3.69
246 247 6.387220 AGCCCTATTACAAATTGAGTAGGAGT 59.613 38.462 17.65 7.45 32.35 3.85
247 248 7.054751 GCCCTATTACAAATTGAGTAGGAGTT 58.945 38.462 17.65 0.00 32.35 3.01
248 249 7.226918 GCCCTATTACAAATTGAGTAGGAGTTC 59.773 40.741 17.65 6.69 32.35 3.01
249 250 8.487028 CCCTATTACAAATTGAGTAGGAGTTCT 58.513 37.037 17.65 0.00 32.35 3.01
285 286 9.561069 ACAAGTTGTATTCTAACAAGAACATCT 57.439 29.630 6.75 0.00 39.92 2.90
288 289 8.926710 AGTTGTATTCTAACAAGAACATCTTCG 58.073 33.333 0.00 0.00 39.92 3.79
289 290 7.827819 TGTATTCTAACAAGAACATCTTCGG 57.172 36.000 0.00 0.00 33.78 4.30
290 291 7.383687 TGTATTCTAACAAGAACATCTTCGGT 58.616 34.615 0.00 0.00 33.78 4.69
291 292 8.525316 TGTATTCTAACAAGAACATCTTCGGTA 58.475 33.333 0.00 0.00 33.78 4.02
292 293 9.362539 GTATTCTAACAAGAACATCTTCGGTAA 57.637 33.333 0.00 0.00 33.78 2.85
294 295 8.842358 TTCTAACAAGAACATCTTCGGTAATT 57.158 30.769 0.00 0.00 33.78 1.40
295 296 8.251750 TCTAACAAGAACATCTTCGGTAATTG 57.748 34.615 0.00 0.00 33.78 2.32
296 297 6.877611 AACAAGAACATCTTCGGTAATTGT 57.122 33.333 0.00 0.00 33.78 2.71
297 298 7.972832 AACAAGAACATCTTCGGTAATTGTA 57.027 32.000 0.00 0.00 33.78 2.41
298 299 8.561738 AACAAGAACATCTTCGGTAATTGTAT 57.438 30.769 0.00 0.00 33.78 2.29
299 300 8.561738 ACAAGAACATCTTCGGTAATTGTATT 57.438 30.769 0.00 0.00 33.78 1.89
300 301 9.010029 ACAAGAACATCTTCGGTAATTGTATTT 57.990 29.630 0.00 0.00 33.78 1.40
301 302 9.277565 CAAGAACATCTTCGGTAATTGTATTTG 57.722 33.333 0.00 0.00 33.78 2.32
302 303 7.985476 AGAACATCTTCGGTAATTGTATTTGG 58.015 34.615 0.00 0.00 0.00 3.28
303 304 6.131544 ACATCTTCGGTAATTGTATTTGGC 57.868 37.500 0.00 0.00 0.00 4.52
304 305 5.885912 ACATCTTCGGTAATTGTATTTGGCT 59.114 36.000 0.00 0.00 0.00 4.75
305 306 6.038271 ACATCTTCGGTAATTGTATTTGGCTC 59.962 38.462 0.00 0.00 0.00 4.70
306 307 4.879545 TCTTCGGTAATTGTATTTGGCTCC 59.120 41.667 0.00 0.00 0.00 4.70
307 308 4.497291 TCGGTAATTGTATTTGGCTCCT 57.503 40.909 0.00 0.00 0.00 3.69
308 309 5.617528 TCGGTAATTGTATTTGGCTCCTA 57.382 39.130 0.00 0.00 0.00 2.94
309 310 5.607477 TCGGTAATTGTATTTGGCTCCTAG 58.393 41.667 0.00 0.00 0.00 3.02
310 311 4.755123 CGGTAATTGTATTTGGCTCCTAGG 59.245 45.833 0.82 0.82 0.00 3.02
311 312 5.686650 CGGTAATTGTATTTGGCTCCTAGGT 60.687 44.000 9.08 0.00 0.00 3.08
312 313 5.531287 GGTAATTGTATTTGGCTCCTAGGTG 59.469 44.000 9.08 7.68 0.00 4.00
313 314 2.710096 TGTATTTGGCTCCTAGGTGC 57.290 50.000 24.68 24.68 0.00 5.01
314 315 1.912731 TGTATTTGGCTCCTAGGTGCA 59.087 47.619 31.19 17.76 36.47 4.57
315 316 2.509548 TGTATTTGGCTCCTAGGTGCAT 59.490 45.455 31.19 20.65 36.47 3.96
316 317 3.714280 TGTATTTGGCTCCTAGGTGCATA 59.286 43.478 31.19 19.77 36.47 3.14
317 318 4.350816 TGTATTTGGCTCCTAGGTGCATAT 59.649 41.667 31.19 22.70 36.47 1.78
318 319 2.936919 TTGGCTCCTAGGTGCATATG 57.063 50.000 31.19 0.00 36.47 1.78
319 320 0.397941 TGGCTCCTAGGTGCATATGC 59.602 55.000 31.19 21.09 42.50 3.14
333 334 4.764679 GCATATGCACCCATTATCGAAA 57.235 40.909 22.84 0.00 41.59 3.46
334 335 5.314923 GCATATGCACCCATTATCGAAAT 57.685 39.130 22.84 0.00 41.59 2.17
335 336 6.435430 GCATATGCACCCATTATCGAAATA 57.565 37.500 22.84 0.00 41.59 1.40
336 337 6.258160 GCATATGCACCCATTATCGAAATAC 58.742 40.000 22.84 0.00 41.59 1.89
337 338 6.128035 GCATATGCACCCATTATCGAAATACA 60.128 38.462 22.84 0.00 41.59 2.29
338 339 5.689383 ATGCACCCATTATCGAAATACAC 57.311 39.130 0.00 0.00 0.00 2.90
339 340 4.518249 TGCACCCATTATCGAAATACACA 58.482 39.130 0.00 0.00 0.00 3.72
340 341 5.129634 TGCACCCATTATCGAAATACACAT 58.870 37.500 0.00 0.00 0.00 3.21
341 342 5.592282 TGCACCCATTATCGAAATACACATT 59.408 36.000 0.00 0.00 0.00 2.71
342 343 6.096141 TGCACCCATTATCGAAATACACATTT 59.904 34.615 0.00 0.00 37.06 2.32
343 344 6.636850 GCACCCATTATCGAAATACACATTTC 59.363 38.462 0.00 0.92 44.44 2.17
380 381 9.651913 AAAATTCGGAATAAAAATACTGCATGT 57.348 25.926 3.22 0.00 0.00 3.21
386 387 9.988350 CGGAATAAAAATACTGCATGTATATCC 57.012 33.333 8.59 8.69 40.69 2.59
387 388 9.988350 GGAATAAAAATACTGCATGTATATCCG 57.012 33.333 8.59 0.00 40.69 4.18
388 389 9.988350 GAATAAAAATACTGCATGTATATCCGG 57.012 33.333 0.00 0.00 40.69 5.14
389 390 9.733556 AATAAAAATACTGCATGTATATCCGGA 57.266 29.630 6.61 6.61 40.69 5.14
390 391 7.435068 AAAAATACTGCATGTATATCCGGAC 57.565 36.000 6.12 0.00 40.69 4.79
391 392 5.738619 AATACTGCATGTATATCCGGACA 57.261 39.130 6.12 0.00 40.69 4.02
392 393 5.939764 ATACTGCATGTATATCCGGACAT 57.060 39.130 6.12 2.01 39.86 3.06
393 394 4.623932 ACTGCATGTATATCCGGACATT 57.376 40.909 6.12 0.00 34.01 2.71
394 395 4.973168 ACTGCATGTATATCCGGACATTT 58.027 39.130 6.12 0.00 34.01 2.32
395 396 5.376625 ACTGCATGTATATCCGGACATTTT 58.623 37.500 6.12 0.00 34.01 1.82
396 397 6.530120 ACTGCATGTATATCCGGACATTTTA 58.470 36.000 6.12 0.00 34.01 1.52
397 398 7.168219 ACTGCATGTATATCCGGACATTTTAT 58.832 34.615 6.12 2.53 34.01 1.40
398 399 7.119699 ACTGCATGTATATCCGGACATTTTATG 59.880 37.037 6.12 7.69 34.01 1.90
400 401 7.094848 TGCATGTATATCCGGACATTTTATGTG 60.095 37.037 6.12 3.32 45.03 3.21
401 402 6.795098 TGTATATCCGGACATTTTATGTGC 57.205 37.500 6.12 0.00 45.03 4.57
406 407 2.627863 GGACATTTTATGTGCGTGCA 57.372 45.000 0.00 0.00 45.03 4.57
407 408 2.250188 GGACATTTTATGTGCGTGCAC 58.750 47.619 17.72 17.72 45.03 4.57
415 416 4.302154 GTGCGTGCACAAGGTTTC 57.698 55.556 19.45 0.00 45.53 2.78
416 417 1.654137 GTGCGTGCACAAGGTTTCG 60.654 57.895 19.45 0.61 45.53 3.46
417 418 2.051345 GCGTGCACAAGGTTTCGG 60.051 61.111 18.64 0.00 0.00 4.30
418 419 2.830285 GCGTGCACAAGGTTTCGGT 61.830 57.895 18.64 0.00 0.00 4.69
419 420 1.010125 CGTGCACAAGGTTTCGGTG 60.010 57.895 18.64 0.00 35.68 4.94
420 421 1.433053 CGTGCACAAGGTTTCGGTGA 61.433 55.000 18.64 0.00 34.52 4.02
421 422 0.736053 GTGCACAAGGTTTCGGTGAA 59.264 50.000 13.17 0.00 34.52 3.18
422 423 1.133407 GTGCACAAGGTTTCGGTGAAA 59.867 47.619 13.17 0.00 34.52 2.69
423 424 1.819288 TGCACAAGGTTTCGGTGAAAA 59.181 42.857 0.00 0.00 33.14 2.29
424 425 2.231478 TGCACAAGGTTTCGGTGAAAAA 59.769 40.909 0.00 0.00 33.14 1.94
425 426 2.601314 GCACAAGGTTTCGGTGAAAAAC 59.399 45.455 0.00 0.00 33.14 2.43
426 427 2.849473 CACAAGGTTTCGGTGAAAAACG 59.151 45.455 0.00 0.00 37.46 3.60
427 428 2.748532 ACAAGGTTTCGGTGAAAAACGA 59.251 40.909 0.00 0.00 37.46 3.85
428 429 3.379057 ACAAGGTTTCGGTGAAAAACGAT 59.621 39.130 0.00 0.00 39.06 3.73
429 430 4.575645 ACAAGGTTTCGGTGAAAAACGATA 59.424 37.500 0.00 0.00 39.06 2.92
430 431 5.239963 ACAAGGTTTCGGTGAAAAACGATAT 59.760 36.000 0.00 0.00 39.06 1.63
431 432 5.952526 AGGTTTCGGTGAAAAACGATATT 57.047 34.783 0.00 0.00 39.06 1.28
432 433 6.321848 AGGTTTCGGTGAAAAACGATATTT 57.678 33.333 0.00 0.00 39.06 1.40
433 434 6.741109 AGGTTTCGGTGAAAAACGATATTTT 58.259 32.000 0.00 0.00 39.06 1.82
434 435 7.204604 AGGTTTCGGTGAAAAACGATATTTTT 58.795 30.769 0.00 0.00 39.06 1.94
473 474 8.897872 AAAAAGACAATTTCTGATGCTTCATT 57.102 26.923 2.33 0.00 33.46 2.57
474 475 8.530269 AAAAGACAATTTCTGATGCTTCATTC 57.470 30.769 2.33 0.00 33.46 2.67
475 476 7.463961 AAGACAATTTCTGATGCTTCATTCT 57.536 32.000 2.33 0.00 33.46 2.40
476 477 8.571461 AAGACAATTTCTGATGCTTCATTCTA 57.429 30.769 2.33 0.00 33.46 2.10
477 478 8.571461 AGACAATTTCTGATGCTTCATTCTAA 57.429 30.769 2.33 0.00 31.12 2.10
478 479 8.457261 AGACAATTTCTGATGCTTCATTCTAAC 58.543 33.333 2.33 0.00 31.12 2.34
479 480 8.345724 ACAATTTCTGATGCTTCATTCTAACT 57.654 30.769 2.33 0.00 0.00 2.24
480 481 9.453572 ACAATTTCTGATGCTTCATTCTAACTA 57.546 29.630 2.33 0.00 0.00 2.24
484 485 9.671279 TTTCTGATGCTTCATTCTAACTATTCA 57.329 29.630 2.33 0.00 0.00 2.57
485 486 8.654230 TCTGATGCTTCATTCTAACTATTCAC 57.346 34.615 2.33 0.00 0.00 3.18
486 487 7.436376 TCTGATGCTTCATTCTAACTATTCACG 59.564 37.037 2.33 0.00 0.00 4.35
487 488 7.264947 TGATGCTTCATTCTAACTATTCACGA 58.735 34.615 0.00 0.00 0.00 4.35
488 489 7.436376 TGATGCTTCATTCTAACTATTCACGAG 59.564 37.037 0.00 0.00 0.00 4.18
489 490 6.042777 TGCTTCATTCTAACTATTCACGAGG 58.957 40.000 0.00 0.00 0.00 4.63
490 491 5.050702 GCTTCATTCTAACTATTCACGAGGC 60.051 44.000 0.00 0.00 0.00 4.70
491 492 5.592104 TCATTCTAACTATTCACGAGGCA 57.408 39.130 0.00 0.00 0.00 4.75
492 493 6.161855 TCATTCTAACTATTCACGAGGCAT 57.838 37.500 0.00 0.00 0.00 4.40
493 494 6.582636 TCATTCTAACTATTCACGAGGCATT 58.417 36.000 0.00 0.00 0.00 3.56
494 495 7.047891 TCATTCTAACTATTCACGAGGCATTT 58.952 34.615 0.00 0.00 0.00 2.32
495 496 6.903883 TTCTAACTATTCACGAGGCATTTC 57.096 37.500 0.00 0.00 0.00 2.17
496 497 6.222038 TCTAACTATTCACGAGGCATTTCT 57.778 37.500 0.00 0.00 0.00 2.52
497 498 6.640518 TCTAACTATTCACGAGGCATTTCTT 58.359 36.000 0.00 0.00 0.00 2.52
498 499 7.103641 TCTAACTATTCACGAGGCATTTCTTT 58.896 34.615 0.00 0.00 0.00 2.52
499 500 8.255206 TCTAACTATTCACGAGGCATTTCTTTA 58.745 33.333 0.00 0.00 0.00 1.85
500 501 7.865706 AACTATTCACGAGGCATTTCTTTAT 57.134 32.000 0.00 0.00 0.00 1.40
501 502 7.484035 ACTATTCACGAGGCATTTCTTTATC 57.516 36.000 0.00 0.00 0.00 1.75
502 503 7.275920 ACTATTCACGAGGCATTTCTTTATCT 58.724 34.615 0.00 0.00 0.00 1.98
503 504 7.770897 ACTATTCACGAGGCATTTCTTTATCTT 59.229 33.333 0.00 0.00 0.00 2.40
504 505 6.817765 TTCACGAGGCATTTCTTTATCTTT 57.182 33.333 0.00 0.00 0.00 2.52
505 506 6.817765 TCACGAGGCATTTCTTTATCTTTT 57.182 33.333 0.00 0.00 0.00 2.27
506 507 7.214467 TCACGAGGCATTTCTTTATCTTTTT 57.786 32.000 0.00 0.00 0.00 1.94
507 508 8.330466 TCACGAGGCATTTCTTTATCTTTTTA 57.670 30.769 0.00 0.00 0.00 1.52
508 509 8.234546 TCACGAGGCATTTCTTTATCTTTTTAC 58.765 33.333 0.00 0.00 0.00 2.01
509 510 8.020819 CACGAGGCATTTCTTTATCTTTTTACA 58.979 33.333 0.00 0.00 0.00 2.41
510 511 8.021396 ACGAGGCATTTCTTTATCTTTTTACAC 58.979 33.333 0.00 0.00 0.00 2.90
511 512 8.020819 CGAGGCATTTCTTTATCTTTTTACACA 58.979 33.333 0.00 0.00 0.00 3.72
512 513 9.691362 GAGGCATTTCTTTATCTTTTTACACAA 57.309 29.630 0.00 0.00 0.00 3.33
513 514 9.696917 AGGCATTTCTTTATCTTTTTACACAAG 57.303 29.630 0.00 0.00 0.00 3.16
514 515 8.435430 GGCATTTCTTTATCTTTTTACACAAGC 58.565 33.333 0.00 0.00 0.00 4.01
515 516 8.435430 GCATTTCTTTATCTTTTTACACAAGCC 58.565 33.333 0.00 0.00 0.00 4.35
516 517 9.474920 CATTTCTTTATCTTTTTACACAAGCCA 57.525 29.630 0.00 0.00 0.00 4.75
517 518 8.865590 TTTCTTTATCTTTTTACACAAGCCAC 57.134 30.769 0.00 0.00 0.00 5.01
518 519 7.575414 TCTTTATCTTTTTACACAAGCCACA 57.425 32.000 0.00 0.00 0.00 4.17
519 520 8.001881 TCTTTATCTTTTTACACAAGCCACAA 57.998 30.769 0.00 0.00 0.00 3.33
520 521 8.470805 TCTTTATCTTTTTACACAAGCCACAAA 58.529 29.630 0.00 0.00 0.00 2.83
521 522 9.092876 CTTTATCTTTTTACACAAGCCACAAAA 57.907 29.630 0.00 0.00 0.00 2.44
522 523 9.436957 TTTATCTTTTTACACAAGCCACAAAAA 57.563 25.926 0.00 0.00 0.00 1.94
543 544 5.689927 AAACGTCATTTTTCACGAAAACC 57.310 34.783 4.47 0.00 39.87 3.27
544 545 4.625972 ACGTCATTTTTCACGAAAACCT 57.374 36.364 4.47 0.00 39.87 3.50
545 546 4.989044 ACGTCATTTTTCACGAAAACCTT 58.011 34.783 4.47 0.00 39.87 3.50
546 547 4.796312 ACGTCATTTTTCACGAAAACCTTG 59.204 37.500 4.47 4.22 39.87 3.61
547 548 4.796312 CGTCATTTTTCACGAAAACCTTGT 59.204 37.500 4.47 0.00 39.87 3.16
548 549 5.275695 CGTCATTTTTCACGAAAACCTTGTG 60.276 40.000 4.47 1.11 39.87 3.33
549 550 4.564769 TCATTTTTCACGAAAACCTTGTGC 59.435 37.500 4.47 0.00 39.87 4.57
550 551 3.577649 TTTTCACGAAAACCTTGTGCA 57.422 38.095 0.83 0.00 35.57 4.57
551 552 2.553079 TTCACGAAAACCTTGTGCAC 57.447 45.000 10.75 10.75 33.69 4.57
552 553 1.454201 TCACGAAAACCTTGTGCACA 58.546 45.000 17.42 17.42 33.69 4.57
553 554 1.131504 TCACGAAAACCTTGTGCACAC 59.868 47.619 21.56 5.05 33.69 3.82
554 555 1.135546 CACGAAAACCTTGTGCACACA 60.136 47.619 21.56 10.18 39.98 3.72
567 568 3.233578 GTGCACACACATAAAATGTCCG 58.766 45.455 13.17 0.00 46.61 4.79
568 569 3.058570 GTGCACACACATAAAATGTCCGA 60.059 43.478 13.17 0.00 46.61 4.55
569 570 3.565902 TGCACACACATAAAATGTCCGAA 59.434 39.130 0.00 0.00 42.70 4.30
570 571 4.217334 TGCACACACATAAAATGTCCGAAT 59.783 37.500 0.00 0.00 42.70 3.34
571 572 5.412904 TGCACACACATAAAATGTCCGAATA 59.587 36.000 0.00 0.00 42.70 1.75
572 573 6.094742 TGCACACACATAAAATGTCCGAATAT 59.905 34.615 0.00 0.00 42.70 1.28
573 574 7.281100 TGCACACACATAAAATGTCCGAATATA 59.719 33.333 0.00 0.00 42.70 0.86
574 575 7.586300 GCACACACATAAAATGTCCGAATATAC 59.414 37.037 0.00 0.00 42.70 1.47
575 576 8.608317 CACACACATAAAATGTCCGAATATACA 58.392 33.333 0.00 0.00 42.70 2.29
576 577 9.337396 ACACACATAAAATGTCCGAATATACAT 57.663 29.630 0.00 0.00 42.70 2.29
577 578 9.597999 CACACATAAAATGTCCGAATATACATG 57.402 33.333 0.00 0.00 42.70 3.21
578 579 8.289618 ACACATAAAATGTCCGAATATACATGC 58.710 33.333 0.00 0.00 42.70 4.06
579 580 7.478355 CACATAAAATGTCCGAATATACATGCG 59.522 37.037 0.00 0.00 42.70 4.73
589 590 5.757886 CGAATATACATGCGGGATTTTTGT 58.242 37.500 0.00 0.00 28.62 2.83
590 591 6.205784 CGAATATACATGCGGGATTTTTGTT 58.794 36.000 0.00 0.00 28.62 2.83
591 592 6.695278 CGAATATACATGCGGGATTTTTGTTT 59.305 34.615 0.00 0.00 28.62 2.83
592 593 7.305935 CGAATATACATGCGGGATTTTTGTTTG 60.306 37.037 0.00 0.00 28.62 2.93
593 594 3.742433 ACATGCGGGATTTTTGTTTGA 57.258 38.095 0.00 0.00 0.00 2.69
594 595 4.065321 ACATGCGGGATTTTTGTTTGAA 57.935 36.364 0.00 0.00 0.00 2.69
595 596 4.446371 ACATGCGGGATTTTTGTTTGAAA 58.554 34.783 0.00 0.00 0.00 2.69
596 597 5.062528 ACATGCGGGATTTTTGTTTGAAAT 58.937 33.333 0.00 0.00 0.00 2.17
597 598 5.530543 ACATGCGGGATTTTTGTTTGAAATT 59.469 32.000 0.00 0.00 0.00 1.82
598 599 6.039159 ACATGCGGGATTTTTGTTTGAAATTT 59.961 30.769 0.00 0.00 0.00 1.82
599 600 6.442513 TGCGGGATTTTTGTTTGAAATTTT 57.557 29.167 0.00 0.00 0.00 1.82
600 601 6.856895 TGCGGGATTTTTGTTTGAAATTTTT 58.143 28.000 0.00 0.00 0.00 1.94
601 602 6.969473 TGCGGGATTTTTGTTTGAAATTTTTC 59.031 30.769 0.00 0.00 37.69 2.29
602 603 6.416455 GCGGGATTTTTGTTTGAAATTTTTCC 59.584 34.615 0.00 0.00 36.36 3.13
603 604 7.475840 CGGGATTTTTGTTTGAAATTTTTCCA 58.524 30.769 0.00 0.00 36.36 3.53
604 605 8.134261 CGGGATTTTTGTTTGAAATTTTTCCAT 58.866 29.630 0.00 0.00 36.36 3.41
605 606 9.814899 GGGATTTTTGTTTGAAATTTTTCCATT 57.185 25.926 0.00 0.00 36.36 3.16
641 642 7.424803 TGTATTTTGATAATGTGTGCATAGGC 58.575 34.615 0.00 0.00 41.68 3.93
658 659 3.339547 GCACCTAGGAGCCAAAACA 57.660 52.632 19.57 0.00 0.00 2.83
659 660 0.881796 GCACCTAGGAGCCAAAACAC 59.118 55.000 19.57 0.00 0.00 3.32
660 661 1.534729 CACCTAGGAGCCAAAACACC 58.465 55.000 17.98 0.00 0.00 4.16
661 662 0.036306 ACCTAGGAGCCAAAACACCG 59.964 55.000 17.98 0.00 0.00 4.94
662 663 0.036306 CCTAGGAGCCAAAACACCGT 59.964 55.000 1.05 0.00 0.00 4.83
663 664 1.544759 CCTAGGAGCCAAAACACCGTT 60.545 52.381 1.05 0.00 0.00 4.44
664 665 1.804748 CTAGGAGCCAAAACACCGTTC 59.195 52.381 0.00 0.00 0.00 3.95
665 666 0.182775 AGGAGCCAAAACACCGTTCT 59.817 50.000 0.00 0.00 0.00 3.01
666 667 0.591659 GGAGCCAAAACACCGTTCTC 59.408 55.000 0.00 0.00 0.00 2.87
680 681 2.701073 GTTCTCGAACGTCTTGGAGA 57.299 50.000 0.00 0.00 38.93 3.71
693 694 4.208047 CGTCTTGGAGATTATTCGCTCAAG 59.792 45.833 0.00 10.45 34.45 3.02
707 708 4.601019 TCGCTCAAGCAAAAGAAAAGAAG 58.399 39.130 2.50 0.00 42.21 2.85
765 773 1.069204 AGTATTCCATCGCGCTCATGT 59.931 47.619 5.56 0.00 0.00 3.21
766 774 1.457303 GTATTCCATCGCGCTCATGTC 59.543 52.381 5.56 0.00 0.00 3.06
767 775 0.882042 ATTCCATCGCGCTCATGTCC 60.882 55.000 5.56 0.00 0.00 4.02
768 776 1.960040 TTCCATCGCGCTCATGTCCT 61.960 55.000 5.56 0.00 0.00 3.85
769 777 2.242572 CCATCGCGCTCATGTCCTG 61.243 63.158 5.56 0.00 0.00 3.86
825 833 6.824305 ACCCAAGACTTGATCAAACTATTG 57.176 37.500 16.99 10.55 37.92 1.90
1088 1104 3.844090 GCGTCCTCCTCCTGCTCC 61.844 72.222 0.00 0.00 0.00 4.70
1207 1226 4.509737 GAGTACCTCGCCACGGCC 62.510 72.222 1.63 0.00 37.98 6.13
1301 1320 6.530913 ACTTCATCGGTAATTGATCGATTG 57.469 37.500 17.14 2.30 40.99 2.67
1303 1322 6.201044 ACTTCATCGGTAATTGATCGATTGAC 59.799 38.462 17.14 11.06 40.99 3.18
1381 1406 4.331168 AGCATTAGCAGACGTCATTTTCTC 59.669 41.667 19.50 0.37 45.49 2.87
1405 1433 2.851824 CTGTGTTTCGGTTGTCTTTTGC 59.148 45.455 0.00 0.00 0.00 3.68
1678 1712 9.874215 CATACATGCATCTCAATTAGTTACTTG 57.126 33.333 0.00 0.00 0.00 3.16
1713 1760 0.738412 GTGCATGCATTGGCTTGGTC 60.738 55.000 25.64 2.41 43.37 4.02
1991 2333 4.537433 AAGCTGATCGCGGAGGGC 62.537 66.667 6.13 6.60 45.59 5.19
2303 2650 1.720694 CGCCGTGGTTTTGTCTTGGT 61.721 55.000 0.00 0.00 0.00 3.67
2308 2655 2.422127 CGTGGTTTTGTCTTGGTTGTCT 59.578 45.455 0.00 0.00 0.00 3.41
2325 2672 3.902150 TGTCTGTCGTTTCATCTGTCTC 58.098 45.455 0.00 0.00 0.00 3.36
2334 2682 4.321601 CGTTTCATCTGTCTCAGTTCCTCT 60.322 45.833 0.00 0.00 32.61 3.69
2336 2684 3.360867 TCATCTGTCTCAGTTCCTCTCC 58.639 50.000 0.00 0.00 32.61 3.71
2340 2688 1.076727 TCTCAGTTCCTCTCCGGCA 59.923 57.895 0.00 0.00 0.00 5.69
2341 2689 0.324738 TCTCAGTTCCTCTCCGGCAT 60.325 55.000 0.00 0.00 0.00 4.40
2358 2706 3.842925 ATGGTCACGGCGGTTTGCT 62.843 57.895 13.24 0.00 45.43 3.91
2369 2780 0.517316 CGGTTTGCTGCTTGGTAGTC 59.483 55.000 0.00 0.00 0.00 2.59
2370 2781 1.604604 GGTTTGCTGCTTGGTAGTCA 58.395 50.000 0.00 0.00 0.00 3.41
2371 2782 1.266989 GGTTTGCTGCTTGGTAGTCAC 59.733 52.381 0.00 0.00 0.00 3.67
2372 2783 1.069906 GTTTGCTGCTTGGTAGTCACG 60.070 52.381 0.00 0.00 0.00 4.35
2373 2784 0.602638 TTGCTGCTTGGTAGTCACGG 60.603 55.000 0.00 0.00 0.00 4.94
2374 2785 1.292223 GCTGCTTGGTAGTCACGGA 59.708 57.895 0.00 0.00 0.00 4.69
2375 2786 0.737715 GCTGCTTGGTAGTCACGGAG 60.738 60.000 0.00 0.00 36.42 4.63
2415 2829 4.760047 GTGGACGGGCGCTGACAT 62.760 66.667 7.64 0.00 0.00 3.06
2487 2911 8.721133 AAGGGGACATAAATAACTTTCACTTT 57.279 30.769 0.00 0.00 0.00 2.66
2505 2930 9.965824 TTTCACTTTTATTCCAGAAAACTCATC 57.034 29.630 0.00 0.00 0.00 2.92
2525 2950 7.060383 TCATCAAAAATCCTAACAAAAGCCA 57.940 32.000 0.00 0.00 0.00 4.75
2527 2952 6.723298 TCAAAAATCCTAACAAAAGCCAGA 57.277 33.333 0.00 0.00 0.00 3.86
2568 2993 1.518325 TTGAATCAACGACGCCACAT 58.482 45.000 0.00 0.00 0.00 3.21
2578 3003 5.006261 TCAACGACGCCACATGAATAATTAG 59.994 40.000 0.00 0.00 0.00 1.73
2636 3064 4.760220 GGGGAGCTGGGGAAGGGA 62.760 72.222 0.00 0.00 0.00 4.20
2639 3067 2.683933 GAGCTGGGGAAGGGACGA 60.684 66.667 0.00 0.00 0.00 4.20
2696 3125 3.062500 GCATGCATTTCCGGGCGAA 62.063 57.895 14.21 0.00 0.00 4.70
2708 3137 1.519751 CGGGCGAACAATCCAAACCA 61.520 55.000 0.00 0.00 0.00 3.67
2829 3261 3.206150 TGAAAAAGAAGCTTCGCTGTCT 58.794 40.909 20.43 4.81 39.62 3.41
2914 3360 1.038280 GGTACTCGATCCCACCGATT 58.962 55.000 0.00 0.00 35.35 3.34
3023 3475 0.327770 GGAACCCCACCCCCATACTA 60.328 60.000 0.00 0.00 0.00 1.82
3024 3476 1.137697 GAACCCCACCCCCATACTAG 58.862 60.000 0.00 0.00 0.00 2.57
3025 3477 0.424368 AACCCCACCCCCATACTAGT 59.576 55.000 0.00 0.00 0.00 2.57
3026 3478 1.332213 ACCCCACCCCCATACTAGTA 58.668 55.000 4.77 4.77 0.00 1.82
3040 3492 7.441458 CCCCATACTAGTACTACATTCTTTTGC 59.559 40.741 4.31 0.00 0.00 3.68
3052 3504 5.600908 CATTCTTTTGCCCTGAATGTTTG 57.399 39.130 0.00 0.00 40.97 2.93
3081 3538 5.630680 GCCATTTATGTGCTCAATTTATCCG 59.369 40.000 0.00 0.00 0.00 4.18
3095 3552 4.513198 TTTATCCGGGCAAAGTTTTGAG 57.487 40.909 0.00 0.00 40.55 3.02
3098 3555 2.379972 TCCGGGCAAAGTTTTGAGAAA 58.620 42.857 0.00 0.00 40.55 2.52
3119 3576 2.068837 AAATCAGTCGAAACCGCGTA 57.931 45.000 4.92 0.00 0.00 4.42
3176 3674 6.922957 GTCTTGGCATGAGTATCTCTTTCTAG 59.077 42.308 2.94 0.00 34.92 2.43
3220 3718 4.917474 GGCTAAGCCGAAACCGTA 57.083 55.556 0.00 0.00 39.62 4.02
3221 3719 2.674296 GGCTAAGCCGAAACCGTAG 58.326 57.895 0.00 0.00 39.62 3.51
3222 3720 0.108472 GGCTAAGCCGAAACCGTAGT 60.108 55.000 0.00 0.00 39.62 2.73
3302 3823 2.118313 TGGTTGCTGATCCATGTGAG 57.882 50.000 0.00 0.00 0.00 3.51
3400 3921 1.207811 GAGGCAATTGGAATGTTGGGG 59.792 52.381 7.72 0.00 0.00 4.96
3401 3922 0.983467 GGCAATTGGAATGTTGGGGT 59.017 50.000 7.72 0.00 0.00 4.95
3417 3938 1.743394 GGGGTTTTTATGCTGGACTCG 59.257 52.381 0.00 0.00 0.00 4.18
3428 3949 1.468908 GCTGGACTCGAGTGTCATCAG 60.469 57.143 25.58 20.27 38.61 2.90
3470 3993 2.883828 ATAGAATCGGCCGGCCCTG 61.884 63.158 39.24 26.43 0.00 4.45
3483 4006 2.419021 CCGGCCCTGACGATACTTTAAA 60.419 50.000 0.00 0.00 35.20 1.52
3487 4010 4.331992 GGCCCTGACGATACTTTAAAAGTC 59.668 45.833 0.00 0.00 41.77 3.01
3490 4017 6.093633 GCCCTGACGATACTTTAAAAGTCATT 59.906 38.462 0.00 0.00 41.77 2.57
3491 4018 7.279313 GCCCTGACGATACTTTAAAAGTCATTA 59.721 37.037 0.00 0.00 41.77 1.90
3604 4274 0.823356 CCTGTATTTGGGGCCATCCG 60.823 60.000 4.39 0.00 36.01 4.18
3642 4312 5.120830 GCTTGTCTGTACTGTACATTTGGAG 59.879 44.000 19.99 14.59 38.15 3.86
3647 4317 2.789409 ACTGTACATTTGGAGAGGCC 57.211 50.000 0.00 0.00 37.10 5.19
3860 4531 3.065371 CAGTCCAACAGGCCGATTATTTC 59.935 47.826 0.00 0.00 0.00 2.17
3862 4533 3.694566 GTCCAACAGGCCGATTATTTCTT 59.305 43.478 0.00 0.00 0.00 2.52
3864 4535 4.157656 TCCAACAGGCCGATTATTTCTTTG 59.842 41.667 0.00 0.00 0.00 2.77
3865 4536 4.157656 CCAACAGGCCGATTATTTCTTTGA 59.842 41.667 0.00 0.00 0.00 2.69
3866 4537 5.163519 CCAACAGGCCGATTATTTCTTTGAT 60.164 40.000 0.00 0.00 0.00 2.57
3867 4538 5.505173 ACAGGCCGATTATTTCTTTGATG 57.495 39.130 0.00 0.00 0.00 3.07
3869 4540 5.829924 ACAGGCCGATTATTTCTTTGATGAT 59.170 36.000 0.00 0.00 0.00 2.45
3870 4541 6.147581 CAGGCCGATTATTTCTTTGATGATG 58.852 40.000 0.00 0.00 0.00 3.07
3872 4543 5.241506 GGCCGATTATTTCTTTGATGATGGA 59.758 40.000 0.00 0.00 0.00 3.41
3874 4545 6.860023 GCCGATTATTTCTTTGATGATGGAAG 59.140 38.462 0.00 0.00 0.00 3.46
3875 4546 6.860023 CCGATTATTTCTTTGATGATGGAAGC 59.140 38.462 0.00 0.00 0.00 3.86
3878 4549 9.760077 GATTATTTCTTTGATGATGGAAGCAAT 57.240 29.630 0.00 0.00 33.49 3.56
3880 4551 7.843490 ATTTCTTTGATGATGGAAGCAATTG 57.157 32.000 0.00 0.00 33.49 2.32
3881 4552 5.333299 TCTTTGATGATGGAAGCAATTGG 57.667 39.130 7.72 0.00 33.49 3.16
3882 4553 4.160814 TCTTTGATGATGGAAGCAATTGGG 59.839 41.667 7.72 0.00 33.49 4.12
3883 4554 1.758280 TGATGATGGAAGCAATTGGGC 59.242 47.619 7.72 0.00 33.49 5.36
3976 4723 6.418057 TGACCCTGAAAATGTTGCTAAAAT 57.582 33.333 0.00 0.00 0.00 1.82
3978 4725 8.133024 TGACCCTGAAAATGTTGCTAAAATAT 57.867 30.769 0.00 0.00 0.00 1.28
3979 4726 8.034215 TGACCCTGAAAATGTTGCTAAAATATG 58.966 33.333 0.00 0.00 0.00 1.78
3981 4728 9.030452 ACCCTGAAAATGTTGCTAAAATATGTA 57.970 29.630 0.00 0.00 0.00 2.29
4025 4777 4.511454 TGGAATAGCGCTGCTTAATTAGTG 59.489 41.667 22.90 0.00 40.44 2.74
4030 4782 2.032178 GCGCTGCTTAATTAGTGGAAGG 59.968 50.000 0.00 0.00 0.00 3.46
4034 4786 3.006940 TGCTTAATTAGTGGAAGGCGTG 58.993 45.455 0.00 0.00 0.00 5.34
4327 5132 2.738521 CTGACGTCCAAGTGCGGG 60.739 66.667 14.12 0.00 0.00 6.13
4481 5286 0.886563 CAACCGGAACCTCGAGTAGT 59.113 55.000 9.46 0.00 0.00 2.73
4539 5350 2.601367 GCCACCTGCACATGGGTT 60.601 61.111 12.41 0.00 40.77 4.11
4540 5351 2.209315 GCCACCTGCACATGGGTTT 61.209 57.895 12.41 0.00 40.77 3.27
4541 5352 1.757423 GCCACCTGCACATGGGTTTT 61.757 55.000 12.41 0.00 40.77 2.43
4542 5353 1.626686 CCACCTGCACATGGGTTTTA 58.373 50.000 0.00 0.00 32.95 1.52
4571 5382 9.274206 ACTGTATGTAGAGAAAGAAAGGAAAAC 57.726 33.333 0.00 0.00 0.00 2.43
4585 5396 7.090808 AGAAAGGAAAACAAGTCAAAGAACAC 58.909 34.615 0.00 0.00 0.00 3.32
4636 5455 7.426410 TGTTAATTAATTGGTTCTGTTTGCGA 58.574 30.769 11.05 0.00 0.00 5.10
4637 5456 7.921214 TGTTAATTAATTGGTTCTGTTTGCGAA 59.079 29.630 11.05 0.00 0.00 4.70
4643 5464 7.961325 AATTGGTTCTGTTTGCGAATTTATT 57.039 28.000 0.00 0.00 0.00 1.40
4670 5491 8.882736 CCTTATTTAACATTTGATGAAAAGGGC 58.117 33.333 0.00 0.00 33.81 5.19
4671 5492 9.434420 CTTATTTAACATTTGATGAAAAGGGCA 57.566 29.630 0.00 0.00 33.81 5.36
4672 5493 9.956640 TTATTTAACATTTGATGAAAAGGGCAT 57.043 25.926 0.00 0.00 33.81 4.40
4674 5495 9.956640 ATTTAACATTTGATGAAAAGGGCATAA 57.043 25.926 0.00 0.00 33.81 1.90
4675 5496 9.784531 TTTAACATTTGATGAAAAGGGCATAAA 57.215 25.926 0.00 0.00 33.81 1.40
4676 5497 9.956640 TTAACATTTGATGAAAAGGGCATAAAT 57.043 25.926 0.00 0.00 33.81 1.40
4679 5500 9.550406 ACATTTGATGAAAAGGGCATAAATATG 57.450 29.630 0.00 0.00 33.81 1.78
4704 5525 1.402720 GCTGCTACACGTAAACCGGTA 60.403 52.381 8.00 0.00 42.24 4.02
4724 5545 5.449999 CGGTAGATGGCAGGGATTTTTAAAC 60.450 44.000 0.00 0.00 0.00 2.01
4732 5553 3.257127 CAGGGATTTTTAAACCGCCTTGA 59.743 43.478 5.93 0.00 0.00 3.02
4735 5556 4.234574 GGATTTTTAAACCGCCTTGACAG 58.765 43.478 0.00 0.00 0.00 3.51
4741 5562 3.726517 CCGCCTTGACAGCCGTTG 61.727 66.667 0.00 0.00 0.00 4.10
4746 5567 1.810151 GCCTTGACAGCCGTTGATTTA 59.190 47.619 0.00 0.00 0.00 1.40
4779 5600 2.302260 CCGCTTGATCTCTGGAGTCTA 58.698 52.381 0.00 0.00 0.00 2.59
4829 5650 2.902423 ATCTCTCCCGCAGCGACTCT 62.902 60.000 18.75 0.00 0.00 3.24
4831 5652 2.054140 CTCTCCCGCAGCGACTCTAC 62.054 65.000 18.75 0.00 0.00 2.59
4857 5678 3.494626 GCCATCGGGTATATGCATATTCG 59.505 47.826 23.71 21.90 36.17 3.34
4864 5685 5.250200 GGGTATATGCATATTCGTTTCCCA 58.750 41.667 23.71 0.27 0.00 4.37
4865 5686 5.708230 GGGTATATGCATATTCGTTTCCCAA 59.292 40.000 23.71 0.00 0.00 4.12
4912 5733 1.847818 TCACAGGAAAACACGACGAG 58.152 50.000 0.00 0.00 0.00 4.18
4965 5786 1.000233 GTGCAACAATGACGCTGCTG 61.000 55.000 0.00 0.00 36.32 4.41
4984 5805 0.521735 GCGACCATCCTTGAAACACC 59.478 55.000 0.00 0.00 0.00 4.16
5024 5845 1.408422 GCAATGCTCCAACGAAACAC 58.592 50.000 0.00 0.00 0.00 3.32
5025 5846 1.930371 GCAATGCTCCAACGAAACACC 60.930 52.381 0.00 0.00 0.00 4.16
5026 5847 0.591170 AATGCTCCAACGAAACACCG 59.409 50.000 0.00 0.00 0.00 4.94
5027 5848 1.234615 ATGCTCCAACGAAACACCGG 61.235 55.000 0.00 0.00 0.00 5.28
5176 6172 3.133003 AGCTATGGAGAAGTTGTACGCAT 59.867 43.478 0.00 0.00 0.00 4.73
5272 6268 6.052360 TGGATTATATGCGTGTGTGTTACAT 58.948 36.000 0.00 0.00 42.24 2.29
5280 6277 0.538516 TGTGTGTTACATGGGGTGCC 60.539 55.000 0.00 0.00 33.42 5.01
5285 6282 0.251608 GTTACATGGGGTGCCAACCT 60.252 55.000 0.00 0.00 46.70 3.50
5324 6322 1.275291 TGGCTTATATAGAGTGCGCCC 59.725 52.381 4.18 0.00 35.28 6.13
5372 6371 6.253946 AGGGATTTAAGGTACATCAAGAGG 57.746 41.667 0.00 0.00 0.00 3.69
5390 6389 1.985614 GGGGGCGTTACTGGTAACT 59.014 57.895 17.76 0.00 42.31 2.24
5478 6477 4.223953 AGTGACTTTAGGTCTTCTGTCCA 58.776 43.478 0.00 0.00 44.74 4.02
5497 6496 4.748102 GTCCATCGAGTGTTTCTTGTTACA 59.252 41.667 0.00 0.00 0.00 2.41
5624 6623 2.609046 GTCAGGCCTGTGACCCTAT 58.391 57.895 31.58 0.00 40.96 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.633967 CTCCGCCTCTACCTCTACTCTA 59.366 54.545 0.00 0.00 0.00 2.43
1 2 1.418637 CTCCGCCTCTACCTCTACTCT 59.581 57.143 0.00 0.00 0.00 3.24
2 3 1.543871 CCTCCGCCTCTACCTCTACTC 60.544 61.905 0.00 0.00 0.00 2.59
3 4 0.475044 CCTCCGCCTCTACCTCTACT 59.525 60.000 0.00 0.00 0.00 2.57
4 5 0.473326 TCCTCCGCCTCTACCTCTAC 59.527 60.000 0.00 0.00 0.00 2.59
5 6 0.766131 CTCCTCCGCCTCTACCTCTA 59.234 60.000 0.00 0.00 0.00 2.43
6 7 1.534697 CTCCTCCGCCTCTACCTCT 59.465 63.158 0.00 0.00 0.00 3.69
7 8 1.529713 CCTCCTCCGCCTCTACCTC 60.530 68.421 0.00 0.00 0.00 3.85
8 9 2.604152 CCTCCTCCGCCTCTACCT 59.396 66.667 0.00 0.00 0.00 3.08
9 10 3.228017 GCCTCCTCCGCCTCTACC 61.228 72.222 0.00 0.00 0.00 3.18
10 11 3.228017 GGCCTCCTCCGCCTCTAC 61.228 72.222 0.00 0.00 43.48 2.59
11 12 4.896829 CGGCCTCCTCCGCCTCTA 62.897 72.222 0.00 0.00 44.73 2.43
39 40 2.746277 ATCGTTGCCGCCAAGGTC 60.746 61.111 0.00 0.00 43.70 3.85
40 41 3.055719 CATCGTTGCCGCCAAGGT 61.056 61.111 0.00 0.00 43.70 3.50
41 42 3.814268 CCATCGTTGCCGCCAAGG 61.814 66.667 0.00 0.00 44.97 3.61
42 43 3.055719 ACCATCGTTGCCGCCAAG 61.056 61.111 0.00 0.00 0.00 3.61
43 44 3.361158 CACCATCGTTGCCGCCAA 61.361 61.111 0.00 0.00 0.00 4.52
66 67 4.570663 CCCGGCTACTTCGAGCGG 62.571 72.222 0.00 0.00 43.83 5.52
69 70 4.570663 CCGCCCGGCTACTTCGAG 62.571 72.222 8.05 0.00 0.00 4.04
72 73 4.832608 CCACCGCCCGGCTACTTC 62.833 72.222 8.05 0.00 39.32 3.01
97 98 7.645782 GATCTTAGGATATGGCTAACCCGCC 62.646 52.000 0.00 0.00 40.31 6.13
98 99 2.565834 TCTTAGGATATGGCTAACCCGC 59.434 50.000 0.00 0.00 35.87 6.13
99 100 4.440250 CGATCTTAGGATATGGCTAACCCG 60.440 50.000 0.00 0.00 31.64 5.28
100 101 4.710375 TCGATCTTAGGATATGGCTAACCC 59.290 45.833 0.00 0.00 30.58 4.11
101 102 5.916661 TCGATCTTAGGATATGGCTAACC 57.083 43.478 0.00 0.00 31.46 2.85
102 103 8.779354 ATTTTCGATCTTAGGATATGGCTAAC 57.221 34.615 0.00 0.00 31.46 2.34
103 104 8.816894 AGATTTTCGATCTTAGGATATGGCTAA 58.183 33.333 0.00 0.00 31.46 3.09
104 105 8.253810 CAGATTTTCGATCTTAGGATATGGCTA 58.746 37.037 0.00 0.00 31.46 3.93
105 106 7.038729 TCAGATTTTCGATCTTAGGATATGGCT 60.039 37.037 0.00 0.00 31.46 4.75
106 107 7.099764 TCAGATTTTCGATCTTAGGATATGGC 58.900 38.462 0.00 0.00 31.46 4.40
110 111 8.750298 GGGTATCAGATTTTCGATCTTAGGATA 58.250 37.037 0.00 0.00 31.46 2.59
111 112 7.456269 AGGGTATCAGATTTTCGATCTTAGGAT 59.544 37.037 0.00 0.00 34.45 3.24
112 113 6.782988 AGGGTATCAGATTTTCGATCTTAGGA 59.217 38.462 0.00 0.00 0.00 2.94
113 114 6.870965 CAGGGTATCAGATTTTCGATCTTAGG 59.129 42.308 0.00 0.00 0.00 2.69
114 115 7.437748 ACAGGGTATCAGATTTTCGATCTTAG 58.562 38.462 0.00 0.00 0.00 2.18
115 116 7.361457 ACAGGGTATCAGATTTTCGATCTTA 57.639 36.000 0.00 0.00 0.00 2.10
116 117 6.240549 ACAGGGTATCAGATTTTCGATCTT 57.759 37.500 0.00 0.00 0.00 2.40
117 118 5.878406 ACAGGGTATCAGATTTTCGATCT 57.122 39.130 0.00 0.00 0.00 2.75
118 119 6.982852 TCTACAGGGTATCAGATTTTCGATC 58.017 40.000 0.00 0.00 0.00 3.69
119 120 6.978674 TCTACAGGGTATCAGATTTTCGAT 57.021 37.500 0.00 0.00 0.00 3.59
120 121 6.785337 TTCTACAGGGTATCAGATTTTCGA 57.215 37.500 0.00 0.00 0.00 3.71
121 122 7.495934 ACAATTCTACAGGGTATCAGATTTTCG 59.504 37.037 0.00 0.00 0.00 3.46
122 123 8.738645 ACAATTCTACAGGGTATCAGATTTTC 57.261 34.615 0.00 0.00 0.00 2.29
125 126 9.784531 CAATACAATTCTACAGGGTATCAGATT 57.215 33.333 0.00 0.00 0.00 2.40
126 127 9.159254 TCAATACAATTCTACAGGGTATCAGAT 57.841 33.333 0.00 0.00 0.00 2.90
127 128 8.547481 TCAATACAATTCTACAGGGTATCAGA 57.453 34.615 0.00 0.00 0.00 3.27
128 129 9.784531 ATTCAATACAATTCTACAGGGTATCAG 57.215 33.333 0.00 0.00 0.00 2.90
150 151 8.819015 GCACAATATTGCATCAACAATTATTCA 58.181 29.630 15.48 0.00 42.49 2.57
151 152 8.277713 GGCACAATATTGCATCAACAATTATTC 58.722 33.333 15.48 0.00 44.94 1.75
152 153 7.769507 TGGCACAATATTGCATCAACAATTATT 59.230 29.630 15.48 0.00 44.94 1.40
153 154 7.273712 TGGCACAATATTGCATCAACAATTAT 58.726 30.769 15.48 0.00 44.94 1.28
154 155 6.637657 TGGCACAATATTGCATCAACAATTA 58.362 32.000 15.48 0.00 44.94 1.40
155 156 5.489249 TGGCACAATATTGCATCAACAATT 58.511 33.333 15.48 0.00 44.94 2.32
156 157 5.087391 TGGCACAATATTGCATCAACAAT 57.913 34.783 15.48 0.00 44.94 2.71
157 158 4.021280 ACTGGCACAATATTGCATCAACAA 60.021 37.500 15.48 0.00 44.94 2.83
158 159 3.510753 ACTGGCACAATATTGCATCAACA 59.489 39.130 15.48 5.70 44.94 3.33
159 160 4.114058 ACTGGCACAATATTGCATCAAC 57.886 40.909 15.48 1.47 44.94 3.18
160 161 7.501892 TCTTATACTGGCACAATATTGCATCAA 59.498 33.333 15.48 0.00 44.94 2.57
161 162 6.997476 TCTTATACTGGCACAATATTGCATCA 59.003 34.615 15.48 9.60 44.94 3.07
162 163 7.361542 CCTCTTATACTGGCACAATATTGCATC 60.362 40.741 15.48 5.60 44.94 3.91
163 164 6.432162 CCTCTTATACTGGCACAATATTGCAT 59.568 38.462 15.48 0.00 44.94 3.96
164 165 5.764686 CCTCTTATACTGGCACAATATTGCA 59.235 40.000 15.48 4.86 44.94 4.08
165 166 5.765182 ACCTCTTATACTGGCACAATATTGC 59.235 40.000 15.48 2.93 38.70 3.56
184 185 9.344772 CGGCTTGACTCTTATATATATACCTCT 57.655 37.037 1.73 0.00 0.00 3.69
185 186 8.077386 GCGGCTTGACTCTTATATATATACCTC 58.923 40.741 1.73 0.00 0.00 3.85
186 187 7.560262 TGCGGCTTGACTCTTATATATATACCT 59.440 37.037 0.00 0.00 0.00 3.08
187 188 7.648510 GTGCGGCTTGACTCTTATATATATACC 59.351 40.741 0.00 0.00 0.00 2.73
188 189 7.648510 GGTGCGGCTTGACTCTTATATATATAC 59.351 40.741 0.00 0.00 0.00 1.47
189 190 7.560262 AGGTGCGGCTTGACTCTTATATATATA 59.440 37.037 0.00 0.00 0.00 0.86
190 191 6.381420 AGGTGCGGCTTGACTCTTATATATAT 59.619 38.462 0.00 0.00 0.00 0.86
191 192 5.715279 AGGTGCGGCTTGACTCTTATATATA 59.285 40.000 0.00 0.00 0.00 0.86
192 193 4.528596 AGGTGCGGCTTGACTCTTATATAT 59.471 41.667 0.00 0.00 0.00 0.86
193 194 3.895656 AGGTGCGGCTTGACTCTTATATA 59.104 43.478 0.00 0.00 0.00 0.86
194 195 2.700897 AGGTGCGGCTTGACTCTTATAT 59.299 45.455 0.00 0.00 0.00 0.86
195 196 2.108168 AGGTGCGGCTTGACTCTTATA 58.892 47.619 0.00 0.00 0.00 0.98
196 197 0.905357 AGGTGCGGCTTGACTCTTAT 59.095 50.000 0.00 0.00 0.00 1.73
197 198 0.037326 CAGGTGCGGCTTGACTCTTA 60.037 55.000 0.00 0.00 0.00 2.10
198 199 1.302033 CAGGTGCGGCTTGACTCTT 60.302 57.895 0.00 0.00 0.00 2.85
199 200 2.210013 TCAGGTGCGGCTTGACTCT 61.210 57.895 0.00 0.00 0.00 3.24
200 201 2.029844 GTCAGGTGCGGCTTGACTC 61.030 63.158 18.68 2.03 46.71 3.36
201 202 2.031163 GTCAGGTGCGGCTTGACT 59.969 61.111 18.68 3.87 46.71 3.41
203 204 1.888436 CTAGGTCAGGTGCGGCTTGA 61.888 60.000 0.00 0.00 0.00 3.02
204 205 1.448540 CTAGGTCAGGTGCGGCTTG 60.449 63.158 0.00 0.00 0.00 4.01
205 206 2.982130 CTAGGTCAGGTGCGGCTT 59.018 61.111 0.00 0.00 0.00 4.35
206 207 3.775654 GCTAGGTCAGGTGCGGCT 61.776 66.667 0.00 0.00 0.00 5.52
207 208 4.840005 GGCTAGGTCAGGTGCGGC 62.840 72.222 0.00 0.00 0.00 6.53
208 209 4.162690 GGGCTAGGTCAGGTGCGG 62.163 72.222 0.00 0.00 0.00 5.69
209 210 1.115930 ATAGGGCTAGGTCAGGTGCG 61.116 60.000 0.00 0.00 0.00 5.34
210 211 1.132500 AATAGGGCTAGGTCAGGTGC 58.868 55.000 0.00 0.00 0.00 5.01
211 212 3.305720 TGTAATAGGGCTAGGTCAGGTG 58.694 50.000 0.00 0.00 0.00 4.00
212 213 3.700863 TGTAATAGGGCTAGGTCAGGT 57.299 47.619 0.00 0.00 0.00 4.00
213 214 5.568620 ATTTGTAATAGGGCTAGGTCAGG 57.431 43.478 0.00 0.00 0.00 3.86
214 215 6.591935 TCAATTTGTAATAGGGCTAGGTCAG 58.408 40.000 0.00 0.00 0.00 3.51
215 216 6.157994 ACTCAATTTGTAATAGGGCTAGGTCA 59.842 38.462 0.00 0.00 0.00 4.02
216 217 6.592870 ACTCAATTTGTAATAGGGCTAGGTC 58.407 40.000 0.00 0.00 0.00 3.85
217 218 6.576778 ACTCAATTTGTAATAGGGCTAGGT 57.423 37.500 0.00 0.00 0.00 3.08
218 219 7.016268 TCCTACTCAATTTGTAATAGGGCTAGG 59.984 40.741 16.39 7.21 31.80 3.02
219 220 7.963532 TCCTACTCAATTTGTAATAGGGCTAG 58.036 38.462 16.39 0.00 31.80 3.42
220 221 7.567622 ACTCCTACTCAATTTGTAATAGGGCTA 59.432 37.037 16.39 0.00 31.80 3.93
221 222 6.387220 ACTCCTACTCAATTTGTAATAGGGCT 59.613 38.462 16.39 6.09 31.80 5.19
222 223 6.592870 ACTCCTACTCAATTTGTAATAGGGC 58.407 40.000 16.39 0.00 31.80 5.19
223 224 8.487028 AGAACTCCTACTCAATTTGTAATAGGG 58.513 37.037 16.39 12.18 31.80 3.53
259 260 9.561069 AGATGTTCTTGTTAGAATACAACTTGT 57.439 29.630 0.00 0.00 42.14 3.16
262 263 8.926710 CGAAGATGTTCTTGTTAGAATACAACT 58.073 33.333 0.66 0.00 42.14 3.16
263 264 8.169268 CCGAAGATGTTCTTGTTAGAATACAAC 58.831 37.037 0.66 0.00 42.14 3.32
264 265 7.876068 ACCGAAGATGTTCTTGTTAGAATACAA 59.124 33.333 0.66 0.00 42.14 2.41
265 266 7.383687 ACCGAAGATGTTCTTGTTAGAATACA 58.616 34.615 0.66 0.00 42.14 2.29
266 267 7.829378 ACCGAAGATGTTCTTGTTAGAATAC 57.171 36.000 0.66 0.00 42.14 1.89
268 269 9.449719 AATTACCGAAGATGTTCTTGTTAGAAT 57.550 29.630 0.66 0.00 42.14 2.40
269 270 8.717821 CAATTACCGAAGATGTTCTTGTTAGAA 58.282 33.333 0.66 0.00 36.73 2.10
270 271 7.876068 ACAATTACCGAAGATGTTCTTGTTAGA 59.124 33.333 0.66 0.00 36.73 2.10
271 272 8.029642 ACAATTACCGAAGATGTTCTTGTTAG 57.970 34.615 0.66 0.00 36.73 2.34
272 273 7.972832 ACAATTACCGAAGATGTTCTTGTTA 57.027 32.000 0.66 0.00 36.73 2.41
273 274 6.877611 ACAATTACCGAAGATGTTCTTGTT 57.122 33.333 0.66 0.00 36.73 2.83
274 275 8.561738 AATACAATTACCGAAGATGTTCTTGT 57.438 30.769 10.62 10.62 36.73 3.16
275 276 9.277565 CAAATACAATTACCGAAGATGTTCTTG 57.722 33.333 0.66 1.11 36.73 3.02
276 277 8.458843 CCAAATACAATTACCGAAGATGTTCTT 58.541 33.333 0.66 0.00 39.87 2.52
277 278 7.415206 GCCAAATACAATTACCGAAGATGTTCT 60.415 37.037 0.66 0.00 0.00 3.01
278 279 6.691388 GCCAAATACAATTACCGAAGATGTTC 59.309 38.462 0.00 0.00 0.00 3.18
279 280 6.377146 AGCCAAATACAATTACCGAAGATGTT 59.623 34.615 0.00 0.00 0.00 2.71
280 281 5.885912 AGCCAAATACAATTACCGAAGATGT 59.114 36.000 0.00 0.00 0.00 3.06
281 282 6.377327 AGCCAAATACAATTACCGAAGATG 57.623 37.500 0.00 0.00 0.00 2.90
282 283 5.531287 GGAGCCAAATACAATTACCGAAGAT 59.469 40.000 0.00 0.00 0.00 2.40
283 284 4.879545 GGAGCCAAATACAATTACCGAAGA 59.120 41.667 0.00 0.00 0.00 2.87
284 285 4.881850 AGGAGCCAAATACAATTACCGAAG 59.118 41.667 0.00 0.00 0.00 3.79
285 286 4.850680 AGGAGCCAAATACAATTACCGAA 58.149 39.130 0.00 0.00 0.00 4.30
286 287 4.497291 AGGAGCCAAATACAATTACCGA 57.503 40.909 0.00 0.00 0.00 4.69
287 288 4.755123 CCTAGGAGCCAAATACAATTACCG 59.245 45.833 1.05 0.00 0.00 4.02
288 289 5.531287 CACCTAGGAGCCAAATACAATTACC 59.469 44.000 17.98 0.00 0.00 2.85
289 290 5.008712 GCACCTAGGAGCCAAATACAATTAC 59.991 44.000 19.57 0.00 0.00 1.89
290 291 5.130350 GCACCTAGGAGCCAAATACAATTA 58.870 41.667 19.57 0.00 0.00 1.40
291 292 3.954258 GCACCTAGGAGCCAAATACAATT 59.046 43.478 19.57 0.00 0.00 2.32
292 293 3.053693 TGCACCTAGGAGCCAAATACAAT 60.054 43.478 25.94 0.00 0.00 2.71
293 294 2.307392 TGCACCTAGGAGCCAAATACAA 59.693 45.455 25.94 4.24 0.00 2.41
294 295 1.912731 TGCACCTAGGAGCCAAATACA 59.087 47.619 25.94 4.97 0.00 2.29
295 296 2.710096 TGCACCTAGGAGCCAAATAC 57.290 50.000 25.94 0.15 0.00 1.89
296 297 4.807303 GCATATGCACCTAGGAGCCAAATA 60.807 45.833 25.94 17.63 41.59 1.40
297 298 3.759581 CATATGCACCTAGGAGCCAAAT 58.240 45.455 25.94 16.18 0.00 2.32
298 299 2.749466 GCATATGCACCTAGGAGCCAAA 60.749 50.000 25.94 13.05 41.59 3.28
299 300 1.202806 GCATATGCACCTAGGAGCCAA 60.203 52.381 25.94 15.39 41.59 4.52
300 301 0.397941 GCATATGCACCTAGGAGCCA 59.602 55.000 25.94 15.42 41.59 4.75
301 302 3.239861 GCATATGCACCTAGGAGCC 57.760 57.895 25.94 8.49 41.59 4.70
312 313 4.764679 TTTCGATAATGGGTGCATATGC 57.235 40.909 21.09 21.09 42.50 3.14
313 314 7.094848 TGTGTATTTCGATAATGGGTGCATATG 60.095 37.037 0.00 0.00 0.00 1.78
314 315 6.939730 TGTGTATTTCGATAATGGGTGCATAT 59.060 34.615 0.00 0.00 0.00 1.78
315 316 6.292150 TGTGTATTTCGATAATGGGTGCATA 58.708 36.000 0.00 0.00 0.00 3.14
316 317 5.129634 TGTGTATTTCGATAATGGGTGCAT 58.870 37.500 0.00 0.00 0.00 3.96
317 318 4.518249 TGTGTATTTCGATAATGGGTGCA 58.482 39.130 0.00 0.00 0.00 4.57
318 319 5.689383 ATGTGTATTTCGATAATGGGTGC 57.311 39.130 0.00 0.00 0.00 5.01
354 355 9.651913 ACATGCAGTATTTTTATTCCGAATTTT 57.348 25.926 0.00 0.00 0.00 1.82
360 361 9.988350 GGATATACATGCAGTATTTTTATTCCG 57.012 33.333 12.15 0.00 40.52 4.30
361 362 9.988350 CGGATATACATGCAGTATTTTTATTCC 57.012 33.333 12.15 9.19 40.52 3.01
362 363 9.988350 CCGGATATACATGCAGTATTTTTATTC 57.012 33.333 0.00 1.77 40.52 1.75
363 364 9.733556 TCCGGATATACATGCAGTATTTTTATT 57.266 29.630 0.00 0.00 40.52 1.40
364 365 9.162764 GTCCGGATATACATGCAGTATTTTTAT 57.837 33.333 7.81 3.01 40.52 1.40
365 366 8.151596 TGTCCGGATATACATGCAGTATTTTTA 58.848 33.333 7.81 0.00 40.52 1.52
366 367 6.995686 TGTCCGGATATACATGCAGTATTTTT 59.004 34.615 7.81 2.02 40.52 1.94
367 368 6.530120 TGTCCGGATATACATGCAGTATTTT 58.470 36.000 7.81 3.85 40.52 1.82
368 369 6.109156 TGTCCGGATATACATGCAGTATTT 57.891 37.500 7.81 6.57 40.52 1.40
369 370 5.738619 TGTCCGGATATACATGCAGTATT 57.261 39.130 7.81 3.77 40.52 1.89
370 371 5.939764 ATGTCCGGATATACATGCAGTAT 57.060 39.130 12.63 11.76 45.26 2.12
371 372 5.738619 AATGTCCGGATATACATGCAGTA 57.261 39.130 14.71 0.00 36.47 2.74
372 373 4.623932 AATGTCCGGATATACATGCAGT 57.376 40.909 14.71 0.00 36.47 4.40
373 374 5.947228 AAAATGTCCGGATATACATGCAG 57.053 39.130 14.71 0.00 36.47 4.41
374 375 6.939730 ACATAAAATGTCCGGATATACATGCA 59.060 34.615 14.71 1.47 39.92 3.96
375 376 7.243487 CACATAAAATGTCCGGATATACATGC 58.757 38.462 14.71 0.00 42.70 4.06
376 377 7.243487 GCACATAAAATGTCCGGATATACATG 58.757 38.462 14.71 17.71 42.70 3.21
377 378 6.092122 CGCACATAAAATGTCCGGATATACAT 59.908 38.462 14.71 7.42 40.59 2.29
378 379 5.407084 CGCACATAAAATGTCCGGATATACA 59.593 40.000 14.71 5.01 40.59 2.29
379 380 5.854157 CGCACATAAAATGTCCGGATATAC 58.146 41.667 14.71 0.00 40.59 1.47
387 388 2.250188 GTGCACGCACATAAAATGTCC 58.750 47.619 17.03 0.00 45.53 4.02
398 399 1.654137 CGAAACCTTGTGCACGCAC 60.654 57.895 15.20 15.20 46.33 5.34
399 400 2.712539 CGAAACCTTGTGCACGCA 59.287 55.556 13.13 0.00 0.00 5.24
400 401 2.051345 CCGAAACCTTGTGCACGC 60.051 61.111 13.13 0.00 0.00 5.34
401 402 1.010125 CACCGAAACCTTGTGCACG 60.010 57.895 13.13 0.00 0.00 5.34
402 403 0.736053 TTCACCGAAACCTTGTGCAC 59.264 50.000 10.75 10.75 0.00 4.57
403 404 1.464734 TTTCACCGAAACCTTGTGCA 58.535 45.000 0.00 0.00 0.00 4.57
404 405 2.570442 TTTTCACCGAAACCTTGTGC 57.430 45.000 0.00 0.00 30.83 4.57
405 406 2.849473 CGTTTTTCACCGAAACCTTGTG 59.151 45.455 0.00 0.00 34.35 3.33
406 407 2.748532 TCGTTTTTCACCGAAACCTTGT 59.251 40.909 0.00 0.00 34.35 3.16
407 408 3.408288 TCGTTTTTCACCGAAACCTTG 57.592 42.857 0.00 0.00 34.35 3.61
408 409 5.952526 ATATCGTTTTTCACCGAAACCTT 57.047 34.783 0.00 0.00 36.57 3.50
409 410 5.952526 AATATCGTTTTTCACCGAAACCT 57.047 34.783 0.00 0.00 36.57 3.50
410 411 6.996562 AAAATATCGTTTTTCACCGAAACC 57.003 33.333 0.00 0.00 36.57 3.27
448 449 8.897872 AATGAAGCATCAGAAATTGTCTTTTT 57.102 26.923 0.00 0.00 39.39 1.94
449 450 8.365647 AGAATGAAGCATCAGAAATTGTCTTTT 58.634 29.630 0.00 0.00 39.39 2.27
450 451 7.893658 AGAATGAAGCATCAGAAATTGTCTTT 58.106 30.769 0.00 0.00 39.39 2.52
451 452 7.463961 AGAATGAAGCATCAGAAATTGTCTT 57.536 32.000 0.00 0.00 39.39 3.01
452 453 8.457261 GTTAGAATGAAGCATCAGAAATTGTCT 58.543 33.333 0.00 0.00 39.39 3.41
453 454 8.457261 AGTTAGAATGAAGCATCAGAAATTGTC 58.543 33.333 0.00 0.00 39.39 3.18
454 455 8.345724 AGTTAGAATGAAGCATCAGAAATTGT 57.654 30.769 0.00 0.00 39.39 2.71
458 459 9.671279 TGAATAGTTAGAATGAAGCATCAGAAA 57.329 29.630 0.00 0.00 39.39 2.52
459 460 9.102757 GTGAATAGTTAGAATGAAGCATCAGAA 57.897 33.333 0.00 0.00 39.39 3.02
460 461 7.436376 CGTGAATAGTTAGAATGAAGCATCAGA 59.564 37.037 0.00 0.00 39.39 3.27
461 462 7.436376 TCGTGAATAGTTAGAATGAAGCATCAG 59.564 37.037 0.00 0.00 39.39 2.90
462 463 7.264947 TCGTGAATAGTTAGAATGAAGCATCA 58.735 34.615 0.00 0.00 40.57 3.07
463 464 7.095857 CCTCGTGAATAGTTAGAATGAAGCATC 60.096 40.741 0.00 0.00 0.00 3.91
464 465 6.703607 CCTCGTGAATAGTTAGAATGAAGCAT 59.296 38.462 0.00 0.00 0.00 3.79
465 466 6.042777 CCTCGTGAATAGTTAGAATGAAGCA 58.957 40.000 0.00 0.00 0.00 3.91
466 467 5.050702 GCCTCGTGAATAGTTAGAATGAAGC 60.051 44.000 0.00 0.00 0.00 3.86
467 468 6.042777 TGCCTCGTGAATAGTTAGAATGAAG 58.957 40.000 0.00 0.00 0.00 3.02
468 469 5.972935 TGCCTCGTGAATAGTTAGAATGAA 58.027 37.500 0.00 0.00 0.00 2.57
469 470 5.592104 TGCCTCGTGAATAGTTAGAATGA 57.408 39.130 0.00 0.00 0.00 2.57
470 471 6.851222 AATGCCTCGTGAATAGTTAGAATG 57.149 37.500 0.00 0.00 0.00 2.67
471 472 7.275920 AGAAATGCCTCGTGAATAGTTAGAAT 58.724 34.615 0.00 0.00 0.00 2.40
472 473 6.640518 AGAAATGCCTCGTGAATAGTTAGAA 58.359 36.000 0.00 0.00 0.00 2.10
473 474 6.222038 AGAAATGCCTCGTGAATAGTTAGA 57.778 37.500 0.00 0.00 0.00 2.10
474 475 6.910536 AAGAAATGCCTCGTGAATAGTTAG 57.089 37.500 0.00 0.00 0.00 2.34
475 476 8.958119 ATAAAGAAATGCCTCGTGAATAGTTA 57.042 30.769 0.00 0.00 0.00 2.24
476 477 7.770897 AGATAAAGAAATGCCTCGTGAATAGTT 59.229 33.333 0.00 0.00 0.00 2.24
477 478 7.275920 AGATAAAGAAATGCCTCGTGAATAGT 58.724 34.615 0.00 0.00 0.00 2.12
478 479 7.721286 AGATAAAGAAATGCCTCGTGAATAG 57.279 36.000 0.00 0.00 0.00 1.73
479 480 8.506168 AAAGATAAAGAAATGCCTCGTGAATA 57.494 30.769 0.00 0.00 0.00 1.75
480 481 7.396540 AAAGATAAAGAAATGCCTCGTGAAT 57.603 32.000 0.00 0.00 0.00 2.57
481 482 6.817765 AAAGATAAAGAAATGCCTCGTGAA 57.182 33.333 0.00 0.00 0.00 3.18
482 483 6.817765 AAAAGATAAAGAAATGCCTCGTGA 57.182 33.333 0.00 0.00 0.00 4.35
483 484 8.020819 TGTAAAAAGATAAAGAAATGCCTCGTG 58.979 33.333 0.00 0.00 0.00 4.35
484 485 8.021396 GTGTAAAAAGATAAAGAAATGCCTCGT 58.979 33.333 0.00 0.00 0.00 4.18
485 486 8.020819 TGTGTAAAAAGATAAAGAAATGCCTCG 58.979 33.333 0.00 0.00 0.00 4.63
486 487 9.691362 TTGTGTAAAAAGATAAAGAAATGCCTC 57.309 29.630 0.00 0.00 0.00 4.70
487 488 9.696917 CTTGTGTAAAAAGATAAAGAAATGCCT 57.303 29.630 0.00 0.00 30.71 4.75
488 489 8.435430 GCTTGTGTAAAAAGATAAAGAAATGCC 58.565 33.333 0.00 0.00 30.71 4.40
489 490 8.435430 GGCTTGTGTAAAAAGATAAAGAAATGC 58.565 33.333 0.00 0.00 30.71 3.56
490 491 9.474920 TGGCTTGTGTAAAAAGATAAAGAAATG 57.525 29.630 0.00 0.00 30.71 2.32
491 492 9.476202 GTGGCTTGTGTAAAAAGATAAAGAAAT 57.524 29.630 0.00 0.00 30.71 2.17
492 493 8.470805 TGTGGCTTGTGTAAAAAGATAAAGAAA 58.529 29.630 0.00 0.00 30.71 2.52
493 494 8.001881 TGTGGCTTGTGTAAAAAGATAAAGAA 57.998 30.769 0.00 0.00 30.71 2.52
494 495 7.575414 TGTGGCTTGTGTAAAAAGATAAAGA 57.425 32.000 0.00 0.00 30.71 2.52
495 496 8.641499 TTTGTGGCTTGTGTAAAAAGATAAAG 57.359 30.769 0.00 0.00 30.71 1.85
496 497 9.436957 TTTTTGTGGCTTGTGTAAAAAGATAAA 57.563 25.926 0.00 0.00 30.71 1.40
520 521 5.865013 AGGTTTTCGTGAAAAATGACGTTTT 59.135 32.000 9.19 0.00 41.37 2.43
521 522 5.404096 AGGTTTTCGTGAAAAATGACGTTT 58.596 33.333 9.19 0.00 41.37 3.60
522 523 4.989044 AGGTTTTCGTGAAAAATGACGTT 58.011 34.783 9.19 0.00 41.37 3.99
523 524 4.625972 AGGTTTTCGTGAAAAATGACGT 57.374 36.364 9.19 0.00 41.37 4.34
524 525 4.796312 ACAAGGTTTTCGTGAAAAATGACG 59.204 37.500 9.19 0.00 41.37 4.35
525 526 5.500131 GCACAAGGTTTTCGTGAAAAATGAC 60.500 40.000 9.19 0.00 41.37 3.06
526 527 4.564769 GCACAAGGTTTTCGTGAAAAATGA 59.435 37.500 9.19 0.00 41.37 2.57
527 528 4.328440 TGCACAAGGTTTTCGTGAAAAATG 59.672 37.500 9.19 10.80 41.37 2.32
528 529 4.328712 GTGCACAAGGTTTTCGTGAAAAAT 59.671 37.500 13.17 0.00 41.37 1.82
529 530 3.675698 GTGCACAAGGTTTTCGTGAAAAA 59.324 39.130 13.17 0.00 41.37 1.94
530 531 3.246619 GTGCACAAGGTTTTCGTGAAAA 58.753 40.909 13.17 3.74 37.90 2.29
531 532 2.229062 TGTGCACAAGGTTTTCGTGAAA 59.771 40.909 19.28 0.00 32.23 2.69
532 533 1.813178 TGTGCACAAGGTTTTCGTGAA 59.187 42.857 19.28 0.00 32.23 3.18
533 534 1.131504 GTGTGCACAAGGTTTTCGTGA 59.868 47.619 23.59 0.00 32.23 4.35
534 535 1.135546 TGTGTGCACAAGGTTTTCGTG 60.136 47.619 23.59 0.00 38.56 4.35
535 536 1.135517 GTGTGTGCACAAGGTTTTCGT 60.136 47.619 23.59 0.00 43.77 3.85
536 537 1.544686 GTGTGTGCACAAGGTTTTCG 58.455 50.000 23.59 0.00 43.77 3.46
546 547 3.058570 TCGGACATTTTATGTGTGTGCAC 60.059 43.478 10.75 10.75 45.03 4.57
547 548 3.142174 TCGGACATTTTATGTGTGTGCA 58.858 40.909 0.00 0.00 45.03 4.57
548 549 3.822594 TCGGACATTTTATGTGTGTGC 57.177 42.857 0.00 0.00 45.03 4.57
549 550 8.608317 TGTATATTCGGACATTTTATGTGTGTG 58.392 33.333 0.00 0.00 45.03 3.82
550 551 8.725405 TGTATATTCGGACATTTTATGTGTGT 57.275 30.769 0.00 0.00 45.03 3.72
551 552 9.597999 CATGTATATTCGGACATTTTATGTGTG 57.402 33.333 0.00 0.00 45.03 3.82
552 553 8.289618 GCATGTATATTCGGACATTTTATGTGT 58.710 33.333 0.00 0.00 45.03 3.72
553 554 7.478355 CGCATGTATATTCGGACATTTTATGTG 59.522 37.037 0.00 0.00 45.03 3.21
554 555 7.360861 CCGCATGTATATTCGGACATTTTATGT 60.361 37.037 4.57 0.00 44.42 2.29
555 556 6.960992 CCGCATGTATATTCGGACATTTTATG 59.039 38.462 4.57 0.00 44.42 1.90
556 557 6.093495 CCCGCATGTATATTCGGACATTTTAT 59.907 38.462 11.89 0.00 44.42 1.40
557 558 5.410132 CCCGCATGTATATTCGGACATTTTA 59.590 40.000 11.89 0.00 44.42 1.52
558 559 4.215399 CCCGCATGTATATTCGGACATTTT 59.785 41.667 11.89 0.00 44.42 1.82
559 560 3.751175 CCCGCATGTATATTCGGACATTT 59.249 43.478 11.89 0.00 44.42 2.32
560 561 3.007506 TCCCGCATGTATATTCGGACATT 59.992 43.478 11.89 0.00 44.42 2.71
561 562 2.565391 TCCCGCATGTATATTCGGACAT 59.435 45.455 11.89 0.00 44.42 3.06
562 563 1.964933 TCCCGCATGTATATTCGGACA 59.035 47.619 11.89 0.00 44.42 4.02
563 564 2.736144 TCCCGCATGTATATTCGGAC 57.264 50.000 11.89 0.00 44.42 4.79
564 565 3.973206 AATCCCGCATGTATATTCGGA 57.027 42.857 11.89 0.00 44.42 4.55
565 566 5.153513 CAAAAATCCCGCATGTATATTCGG 58.846 41.667 3.60 3.60 41.85 4.30
566 567 5.757886 ACAAAAATCCCGCATGTATATTCG 58.242 37.500 0.00 0.00 0.00 3.34
567 568 7.704472 TCAAACAAAAATCCCGCATGTATATTC 59.296 33.333 0.00 0.00 0.00 1.75
568 569 7.551585 TCAAACAAAAATCCCGCATGTATATT 58.448 30.769 0.00 0.00 0.00 1.28
569 570 7.106439 TCAAACAAAAATCCCGCATGTATAT 57.894 32.000 0.00 0.00 0.00 0.86
570 571 6.516739 TCAAACAAAAATCCCGCATGTATA 57.483 33.333 0.00 0.00 0.00 1.47
571 572 5.398603 TCAAACAAAAATCCCGCATGTAT 57.601 34.783 0.00 0.00 0.00 2.29
572 573 4.855715 TCAAACAAAAATCCCGCATGTA 57.144 36.364 0.00 0.00 0.00 2.29
573 574 3.742433 TCAAACAAAAATCCCGCATGT 57.258 38.095 0.00 0.00 0.00 3.21
574 575 5.610235 ATTTCAAACAAAAATCCCGCATG 57.390 34.783 0.00 0.00 0.00 4.06
575 576 6.631971 AAATTTCAAACAAAAATCCCGCAT 57.368 29.167 0.00 0.00 0.00 4.73
576 577 6.442513 AAAATTTCAAACAAAAATCCCGCA 57.557 29.167 0.00 0.00 0.00 5.69
577 578 6.416455 GGAAAAATTTCAAACAAAAATCCCGC 59.584 34.615 8.06 0.00 38.92 6.13
578 579 7.475840 TGGAAAAATTTCAAACAAAAATCCCG 58.524 30.769 8.06 0.00 38.92 5.14
579 580 9.814899 AATGGAAAAATTTCAAACAAAAATCCC 57.185 25.926 8.06 0.00 38.92 3.85
615 616 8.084073 GCCTATGCACACATTATCAAAATACAT 58.916 33.333 0.00 0.00 37.74 2.29
616 617 7.067981 TGCCTATGCACACATTATCAAAATACA 59.932 33.333 0.00 0.00 44.23 2.29
617 618 7.424803 TGCCTATGCACACATTATCAAAATAC 58.575 34.615 0.00 0.00 44.23 1.89
618 619 7.579761 TGCCTATGCACACATTATCAAAATA 57.420 32.000 0.00 0.00 44.23 1.40
619 620 6.468333 TGCCTATGCACACATTATCAAAAT 57.532 33.333 0.00 0.00 44.23 1.82
620 621 5.911378 TGCCTATGCACACATTATCAAAA 57.089 34.783 0.00 0.00 44.23 2.44
640 641 0.881796 GTGTTTTGGCTCCTAGGTGC 59.118 55.000 24.68 24.68 0.00 5.01
641 642 1.534729 GGTGTTTTGGCTCCTAGGTG 58.465 55.000 9.08 7.68 0.00 4.00
642 643 0.036306 CGGTGTTTTGGCTCCTAGGT 59.964 55.000 9.08 0.00 0.00 3.08
643 644 0.036306 ACGGTGTTTTGGCTCCTAGG 59.964 55.000 0.82 0.82 0.00 3.02
644 645 1.804748 GAACGGTGTTTTGGCTCCTAG 59.195 52.381 0.00 0.00 0.00 3.02
645 646 1.418637 AGAACGGTGTTTTGGCTCCTA 59.581 47.619 0.00 0.00 0.00 2.94
646 647 0.182775 AGAACGGTGTTTTGGCTCCT 59.817 50.000 0.00 0.00 0.00 3.69
647 648 0.591659 GAGAACGGTGTTTTGGCTCC 59.408 55.000 0.00 0.00 0.00 4.70
648 649 0.234884 CGAGAACGGTGTTTTGGCTC 59.765 55.000 0.00 0.00 35.72 4.70
649 650 0.179067 TCGAGAACGGTGTTTTGGCT 60.179 50.000 0.00 0.00 40.21 4.75
650 651 0.658897 TTCGAGAACGGTGTTTTGGC 59.341 50.000 0.00 0.00 40.21 4.52
651 652 2.378507 GTTCGAGAACGGTGTTTTGG 57.621 50.000 0.00 0.00 40.21 3.28
661 662 2.701073 TCTCCAAGACGTTCGAGAAC 57.299 50.000 5.93 5.93 37.92 3.01
662 663 3.936372 AATCTCCAAGACGTTCGAGAA 57.064 42.857 8.32 0.00 35.15 2.87
663 664 5.578005 AATAATCTCCAAGACGTTCGAGA 57.422 39.130 0.00 0.00 35.91 4.04
664 665 4.438145 CGAATAATCTCCAAGACGTTCGAG 59.562 45.833 11.55 0.00 37.62 4.04
665 666 4.348656 CGAATAATCTCCAAGACGTTCGA 58.651 43.478 11.55 0.00 37.62 3.71
666 667 3.061139 GCGAATAATCTCCAAGACGTTCG 60.061 47.826 12.19 12.19 38.04 3.95
680 681 7.370383 TCTTTTCTTTTGCTTGAGCGAATAAT 58.630 30.769 6.50 0.00 43.34 1.28
693 694 5.006068 CCAAGCTGTTCTTCTTTTCTTTTGC 59.994 40.000 0.00 0.00 31.27 3.68
707 708 3.935828 GGTCAATAGTCTCCAAGCTGTTC 59.064 47.826 0.00 0.00 0.00 3.18
765 773 2.158813 GGGCCGAATGATTTAGTCAGGA 60.159 50.000 0.00 0.00 40.92 3.86
766 774 2.222027 GGGCCGAATGATTTAGTCAGG 58.778 52.381 0.00 0.00 40.92 3.86
767 775 2.222027 GGGGCCGAATGATTTAGTCAG 58.778 52.381 0.00 0.00 40.92 3.51
768 776 1.562008 TGGGGCCGAATGATTTAGTCA 59.438 47.619 0.00 0.00 42.06 3.41
769 777 1.947456 GTGGGGCCGAATGATTTAGTC 59.053 52.381 0.00 0.00 0.00 2.59
825 833 0.727398 GCGACAGTATTGGCTGGTTC 59.273 55.000 0.00 0.00 40.59 3.62
1010 1026 2.034879 AGACGCCGGATTGTGCTTG 61.035 57.895 5.05 0.00 0.00 4.01
1011 1027 2.034879 CAGACGCCGGATTGTGCTT 61.035 57.895 5.05 0.00 0.00 3.91
1012 1028 2.434884 CAGACGCCGGATTGTGCT 60.435 61.111 5.05 0.00 0.00 4.40
1013 1029 4.166011 GCAGACGCCGGATTGTGC 62.166 66.667 5.05 7.47 0.00 4.57
1014 1030 3.853330 CGCAGACGCCGGATTGTG 61.853 66.667 5.05 0.00 33.11 3.33
1296 1315 4.625028 TGATCATCCAGCTTAGTCAATCG 58.375 43.478 0.00 0.00 0.00 3.34
1369 1394 5.560966 AAACACAGTTGAGAAAATGACGT 57.439 34.783 0.00 0.00 0.00 4.34
1381 1406 3.757745 AAGACAACCGAAACACAGTTG 57.242 42.857 0.00 0.00 45.02 3.16
1678 1712 1.798223 TGCACATCAGCTTACACGTTC 59.202 47.619 0.00 0.00 34.99 3.95
1713 1760 1.153208 GCCCCTGCACTCTGATCAG 60.153 63.158 17.07 17.07 37.47 2.90
2288 2635 3.192633 ACAGACAACCAAGACAAAACCAC 59.807 43.478 0.00 0.00 0.00 4.16
2303 2650 4.202111 TGAGACAGATGAAACGACAGACAA 60.202 41.667 0.00 0.00 0.00 3.18
2308 2655 4.299155 GAACTGAGACAGATGAAACGACA 58.701 43.478 5.76 0.00 35.18 4.35
2325 2672 1.153289 CCATGCCGGAGAGGAACTG 60.153 63.158 5.05 0.00 45.00 3.16
2340 2688 3.361977 GCAAACCGCCGTGACCAT 61.362 61.111 0.00 0.00 32.94 3.55
2341 2689 4.555709 AGCAAACCGCCGTGACCA 62.556 61.111 0.00 0.00 44.04 4.02
2351 2699 1.266989 GTGACTACCAAGCAGCAAACC 59.733 52.381 0.00 0.00 0.00 3.27
2358 2706 1.816835 CTACTCCGTGACTACCAAGCA 59.183 52.381 0.00 0.00 0.00 3.91
2359 2707 1.817447 ACTACTCCGTGACTACCAAGC 59.183 52.381 0.00 0.00 0.00 4.01
2369 2780 0.239347 ACGAACCGAACTACTCCGTG 59.761 55.000 0.00 0.00 0.00 4.94
2370 2781 0.954452 AACGAACCGAACTACTCCGT 59.046 50.000 0.00 0.00 0.00 4.69
2371 2782 1.981533 GAAACGAACCGAACTACTCCG 59.018 52.381 0.00 0.00 0.00 4.63
2372 2783 1.981533 CGAAACGAACCGAACTACTCC 59.018 52.381 0.00 0.00 0.00 3.85
2373 2784 1.981533 CCGAAACGAACCGAACTACTC 59.018 52.381 0.00 0.00 0.00 2.59
2374 2785 1.932156 GCCGAAACGAACCGAACTACT 60.932 52.381 0.00 0.00 0.00 2.57
2375 2786 0.436150 GCCGAAACGAACCGAACTAC 59.564 55.000 0.00 0.00 0.00 2.73
2487 2911 9.927668 GGATTTTTGATGAGTTTTCTGGAATAA 57.072 29.630 0.00 0.00 0.00 1.40
2505 2930 5.406477 GCTCTGGCTTTTGTTAGGATTTTTG 59.594 40.000 0.00 0.00 35.22 2.44
2525 2950 4.942761 TCCTTTGCAAAATTCAAGCTCT 57.057 36.364 13.84 0.00 0.00 4.09
2527 2952 6.543100 TCAAATTCCTTTGCAAAATTCAAGCT 59.457 30.769 13.84 0.00 41.29 3.74
2540 2965 4.088496 GCGTCGTTGATTCAAATTCCTTTG 59.912 41.667 0.00 0.00 42.60 2.77
2568 2993 5.056480 CGCCACCTCATGACTAATTATTCA 58.944 41.667 7.85 7.85 0.00 2.57
2578 3003 1.009829 GATTCACGCCACCTCATGAC 58.990 55.000 0.00 0.00 0.00 3.06
2636 3064 2.607631 TCTTTTGTTCTCCCGTTCGT 57.392 45.000 0.00 0.00 0.00 3.85
2639 3067 4.261031 CGTTGATTCTTTTGTTCTCCCGTT 60.261 41.667 0.00 0.00 0.00 4.44
2696 3125 2.038659 CCAACCACTGGTTTGGATTGT 58.961 47.619 11.03 0.00 44.33 2.71
2829 3261 0.463654 CCGGCCAATGCAAGTAGCTA 60.464 55.000 2.24 0.00 45.94 3.32
2914 3360 2.719798 GTACGCGCCTACGAAATTAGA 58.280 47.619 5.73 0.00 43.93 2.10
3023 3475 5.499004 TCAGGGCAAAAGAATGTAGTACT 57.501 39.130 0.00 0.00 0.00 2.73
3024 3476 6.555315 CATTCAGGGCAAAAGAATGTAGTAC 58.445 40.000 0.00 0.00 42.12 2.73
3025 3477 6.757897 CATTCAGGGCAAAAGAATGTAGTA 57.242 37.500 0.00 0.00 42.12 1.82
3026 3478 5.649782 CATTCAGGGCAAAAGAATGTAGT 57.350 39.130 0.00 0.00 42.12 2.73
3040 3492 1.962807 TGGCACTTCAAACATTCAGGG 59.037 47.619 0.00 0.00 0.00 4.45
3052 3504 4.439305 TTGAGCACATAAATGGCACTTC 57.561 40.909 0.00 0.00 0.00 3.01
3098 3555 1.600485 ACGCGGTTTCGACTGATTTTT 59.400 42.857 12.47 0.00 39.00 1.94
3176 3674 8.448615 GTCTCTACCATGTGTAACCAAATAAAC 58.551 37.037 0.00 0.00 34.36 2.01
3239 3737 7.709613 CGGAATACAATAGTAAAACTAGCAGGT 59.290 37.037 0.00 0.00 33.66 4.00
3253 3770 5.980116 CCAGTGAGACTTCGGAATACAATAG 59.020 44.000 0.00 0.00 0.00 1.73
3302 3823 0.108138 ACAGGTCAATGCTCTACGGC 60.108 55.000 0.00 0.00 0.00 5.68
3339 3860 2.021457 GCCGCCCATGTTATACAACTT 58.979 47.619 0.00 0.00 35.56 2.66
3400 3921 3.746492 ACACTCGAGTCCAGCATAAAAAC 59.254 43.478 16.96 0.00 0.00 2.43
3401 3922 3.994392 GACACTCGAGTCCAGCATAAAAA 59.006 43.478 16.96 0.00 32.36 1.94
3417 3938 6.634805 TCATCCTTTTCTACTGATGACACTC 58.365 40.000 0.00 0.00 38.84 3.51
3428 3949 7.945033 TGCATTTGTTTTCATCCTTTTCTAC 57.055 32.000 0.00 0.00 0.00 2.59
3522 4060 8.635877 ACTTCTGATGATCGTAGTTTGTATTC 57.364 34.615 0.00 0.00 0.00 1.75
3524 4062 8.683615 TGTACTTCTGATGATCGTAGTTTGTAT 58.316 33.333 0.00 0.00 0.00 2.29
3604 4274 2.686915 AGACAAGCTGAATATGCCAAGC 59.313 45.455 0.00 0.00 0.00 4.01
3678 4349 5.278169 GCCTGATTGCTGTATGATTACTTGG 60.278 44.000 0.00 0.00 0.00 3.61
3860 4531 4.439057 CCCAATTGCTTCCATCATCAAAG 58.561 43.478 0.00 0.00 0.00 2.77
3862 4533 2.168936 GCCCAATTGCTTCCATCATCAA 59.831 45.455 0.00 0.00 0.00 2.57
3864 4535 1.758280 TGCCCAATTGCTTCCATCATC 59.242 47.619 0.00 0.00 0.00 2.92
3865 4536 1.760613 CTGCCCAATTGCTTCCATCAT 59.239 47.619 0.00 0.00 0.00 2.45
3866 4537 1.187974 CTGCCCAATTGCTTCCATCA 58.812 50.000 0.00 0.00 0.00 3.07
3867 4538 0.462789 CCTGCCCAATTGCTTCCATC 59.537 55.000 0.00 0.00 0.00 3.51
3869 4540 2.285024 GCCTGCCCAATTGCTTCCA 61.285 57.895 0.00 0.00 0.00 3.53
3870 4541 2.234913 CTGCCTGCCCAATTGCTTCC 62.235 60.000 0.00 0.00 0.00 3.46
3872 4543 2.288025 CCTGCCTGCCCAATTGCTT 61.288 57.895 0.00 0.00 0.00 3.91
3874 4545 4.462280 GCCTGCCTGCCCAATTGC 62.462 66.667 0.00 0.00 0.00 3.56
3875 4546 2.998480 TGCCTGCCTGCCCAATTG 60.998 61.111 0.00 0.00 0.00 2.32
3883 4554 4.655647 ACACCAGCTGCCTGCCTG 62.656 66.667 8.66 0.00 44.23 4.85
3946 4690 5.786311 CAACATTTTCAGGGTCATCACAAT 58.214 37.500 0.00 0.00 0.00 2.71
3976 4723 2.829720 GACCGGGCATGGAGTATACATA 59.170 50.000 0.00 0.00 0.00 2.29
3978 4725 1.045407 GACCGGGCATGGAGTATACA 58.955 55.000 0.00 0.00 0.00 2.29
3979 4726 1.045407 TGACCGGGCATGGAGTATAC 58.955 55.000 5.41 0.00 0.00 1.47
3981 4728 1.140312 ATTGACCGGGCATGGAGTAT 58.860 50.000 13.08 0.00 0.00 2.12
3982 4729 0.916086 AATTGACCGGGCATGGAGTA 59.084 50.000 13.08 0.00 0.00 2.59
3983 4730 0.039618 AAATTGACCGGGCATGGAGT 59.960 50.000 13.08 0.00 0.00 3.85
4034 4786 0.723981 GACAGAGAGCATTGCGGAAC 59.276 55.000 2.38 0.00 0.00 3.62
4201 4986 9.772973 TCACAACTATTATTATTATGGTCGCTT 57.227 29.630 0.00 0.00 0.00 4.68
4214 4999 6.835488 ACCAAGCATCCATCACAACTATTATT 59.165 34.615 0.00 0.00 0.00 1.40
4496 5301 1.601914 CGCAAAAACAAGCCCTGTACC 60.602 52.381 0.00 0.00 37.23 3.34
4556 5367 8.122472 TCTTTGACTTGTTTTCCTTTCTTTCT 57.878 30.769 0.00 0.00 0.00 2.52
4557 5368 8.648097 GTTCTTTGACTTGTTTTCCTTTCTTTC 58.352 33.333 0.00 0.00 0.00 2.62
4558 5369 8.147704 TGTTCTTTGACTTGTTTTCCTTTCTTT 58.852 29.630 0.00 0.00 0.00 2.52
4559 5370 7.598869 GTGTTCTTTGACTTGTTTTCCTTTCTT 59.401 33.333 0.00 0.00 0.00 2.52
4571 5382 3.067180 AGGCATGTGTGTTCTTTGACTTG 59.933 43.478 0.00 0.00 0.00 3.16
4654 5475 8.995220 CCATATTTATGCCCTTTTCATCAAATG 58.005 33.333 0.00 0.00 32.40 2.32
4659 5480 5.482006 GCCCATATTTATGCCCTTTTCATC 58.518 41.667 0.00 0.00 32.40 2.92
4660 5481 4.286808 GGCCCATATTTATGCCCTTTTCAT 59.713 41.667 0.00 0.00 37.94 2.57
4661 5482 3.645687 GGCCCATATTTATGCCCTTTTCA 59.354 43.478 0.00 0.00 37.94 2.69
4662 5483 3.306019 CGGCCCATATTTATGCCCTTTTC 60.306 47.826 0.00 0.00 40.87 2.29
4663 5484 2.632512 CGGCCCATATTTATGCCCTTTT 59.367 45.455 0.00 0.00 40.87 2.27
4664 5485 2.247358 CGGCCCATATTTATGCCCTTT 58.753 47.619 0.00 0.00 40.87 3.11
4665 5486 1.923356 CGGCCCATATTTATGCCCTT 58.077 50.000 0.00 0.00 40.87 3.95
4666 5487 0.611896 GCGGCCCATATTTATGCCCT 60.612 55.000 0.00 0.00 40.87 5.19
4667 5488 0.611896 AGCGGCCCATATTTATGCCC 60.612 55.000 0.00 0.00 40.87 5.36
4668 5489 0.527565 CAGCGGCCCATATTTATGCC 59.472 55.000 0.00 0.00 40.54 4.40
4669 5490 0.109132 GCAGCGGCCCATATTTATGC 60.109 55.000 0.00 0.00 32.40 3.14
4670 5491 1.538047 AGCAGCGGCCCATATTTATG 58.462 50.000 4.82 0.00 42.56 1.90
4671 5492 2.039746 TGTAGCAGCGGCCCATATTTAT 59.960 45.455 4.82 0.00 42.56 1.40
4672 5493 1.418264 TGTAGCAGCGGCCCATATTTA 59.582 47.619 4.82 0.00 42.56 1.40
4673 5494 0.182537 TGTAGCAGCGGCCCATATTT 59.817 50.000 4.82 0.00 42.56 1.40
4674 5495 0.535102 GTGTAGCAGCGGCCCATATT 60.535 55.000 4.82 0.00 42.56 1.28
4675 5496 1.071471 GTGTAGCAGCGGCCCATAT 59.929 57.895 4.82 0.00 42.56 1.78
4676 5497 2.504032 GTGTAGCAGCGGCCCATA 59.496 61.111 4.82 0.00 42.56 2.74
4677 5498 4.838152 CGTGTAGCAGCGGCCCAT 62.838 66.667 4.82 0.00 42.56 4.00
4679 5500 3.652539 TTACGTGTAGCAGCGGCCC 62.653 63.158 4.82 0.00 42.56 5.80
4704 5525 3.447229 CGGTTTAAAAATCCCTGCCATCT 59.553 43.478 0.00 0.00 0.00 2.90
4741 5562 2.032290 GCGGCCCTAATCAACGTAAATC 60.032 50.000 0.00 0.00 0.00 2.17
4746 5567 1.024579 CAAGCGGCCCTAATCAACGT 61.025 55.000 0.00 0.00 0.00 3.99
4779 5600 1.971149 TGGGATGGAAGTGATGGTCT 58.029 50.000 0.00 0.00 0.00 3.85
4843 5664 7.435068 ACTTGGGAAACGAATATGCATATAC 57.565 36.000 19.39 0.00 0.00 1.47
4857 5678 1.007387 CTGCCGCAACTTGGGAAAC 60.007 57.895 7.39 0.00 31.21 2.78
4892 5713 2.404215 CTCGTCGTGTTTTCCTGTGAT 58.596 47.619 0.00 0.00 0.00 3.06
4965 5786 0.521735 GGTGTTTCAAGGATGGTCGC 59.478 55.000 0.00 0.00 0.00 5.19
4999 5820 4.365111 TTGGAGCATTGCGGGGCT 62.365 61.111 2.38 0.00 44.48 5.19
5004 5825 0.040514 TGTTTCGTTGGAGCATTGCG 60.041 50.000 2.38 0.00 0.00 4.85
5024 5845 3.659089 AACGAAGATCACCGGCCGG 62.659 63.158 42.17 42.17 42.03 6.13
5025 5846 2.125673 AACGAAGATCACCGGCCG 60.126 61.111 21.04 21.04 0.00 6.13
5026 5847 2.750888 GCAACGAAGATCACCGGCC 61.751 63.158 0.00 0.00 0.00 6.13
5027 5848 1.970917 CTGCAACGAAGATCACCGGC 61.971 60.000 0.00 6.44 0.00 6.13
5092 6088 2.696707 AGACTTAGAACCACGACAACCA 59.303 45.455 0.00 0.00 0.00 3.67
5093 6089 3.057734 CAGACTTAGAACCACGACAACC 58.942 50.000 0.00 0.00 0.00 3.77
5094 6090 3.734735 GTCAGACTTAGAACCACGACAAC 59.265 47.826 0.00 0.00 0.00 3.32
5176 6172 2.549349 GGGCCTGAACTCGTAAAACTCA 60.549 50.000 0.84 0.00 0.00 3.41
5272 6268 1.760086 CACAAAGGTTGGCACCCCA 60.760 57.895 0.00 0.00 45.63 4.96
5280 6277 1.000060 CCTCCACATGCACAAAGGTTG 60.000 52.381 0.00 0.00 0.00 3.77
5285 6282 1.228831 CCCCCTCCACATGCACAAA 60.229 57.895 0.00 0.00 0.00 2.83
5329 6327 2.925706 TAACGTGGGCTGGCCAGA 60.926 61.111 37.21 13.40 37.98 3.86
5331 6329 3.121406 TTGTAACGTGGGCTGGCCA 62.121 57.895 20.19 20.19 37.98 5.36
5372 6371 4.623814 GTTACCAGTAACGCCCCC 57.376 61.111 5.02 0.00 36.47 5.40
5390 6389 9.398538 AGCCATTTATAACACTTTATTACGGAA 57.601 29.630 0.00 0.00 0.00 4.30
5478 6477 4.680110 CGACTGTAACAAGAAACACTCGAT 59.320 41.667 0.00 0.00 35.37 3.59
5497 6496 3.013921 GAGGAGTCAAGATCACTCGACT 58.986 50.000 5.80 5.98 41.20 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.