Multiple sequence alignment - TraesCS3D01G145100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G145100 chr3D 100.000 4901 0 0 1 4901 108810883 108815783 0.000000e+00 9051.0
1 TraesCS3D01G145100 chr3D 80.795 151 19 9 14 158 463193590 463193444 5.190000e-20 110.0
2 TraesCS3D01G145100 chr3D 94.203 69 2 2 4546 4613 24868269 24868336 2.410000e-18 104.0
3 TraesCS3D01G145100 chr3D 100.000 37 0 0 3464 3500 108814281 108814317 8.800000e-08 69.4
4 TraesCS3D01G145100 chr3D 100.000 37 0 0 3399 3435 108814346 108814382 8.800000e-08 69.4
5 TraesCS3D01G145100 chr3B 94.935 4028 155 20 473 4469 160272551 160276560 0.000000e+00 6263.0
6 TraesCS3D01G145100 chr3B 91.026 234 18 2 42 274 160271688 160271919 3.680000e-81 313.0
7 TraesCS3D01G145100 chr3B 91.748 206 10 3 266 471 160272096 160272294 3.740000e-71 279.0
8 TraesCS3D01G145100 chr3B 100.000 41 0 0 3464 3504 160275475 160275515 5.260000e-10 76.8
9 TraesCS3D01G145100 chr3B 100.000 37 0 0 3399 3435 160275551 160275587 8.800000e-08 69.4
10 TraesCS3D01G145100 chr3A 92.154 3454 195 30 785 4199 121649178 121645762 0.000000e+00 4807.0
11 TraesCS3D01G145100 chr3A 87.912 364 22 5 430 784 121651000 121650650 4.570000e-110 409.0
12 TraesCS3D01G145100 chr3A 78.363 171 28 9 13 178 88531886 88532052 8.680000e-18 102.0
13 TraesCS3D01G145100 chr3A 90.789 76 6 1 4770 4845 121645702 121645628 3.120000e-17 100.0
14 TraesCS3D01G145100 chr3A 100.000 37 0 0 3399 3435 121646477 121646441 8.800000e-08 69.4
15 TraesCS3D01G145100 chr6A 81.065 169 25 7 14 178 223798259 223798094 1.430000e-25 128.0
16 TraesCS3D01G145100 chr4D 77.727 220 40 8 14 228 405211559 405211774 5.150000e-25 126.0
17 TraesCS3D01G145100 chr6D 79.882 169 27 6 14 178 13740915 13741080 3.100000e-22 117.0
18 TraesCS3D01G145100 chr6D 79.042 167 28 7 16 178 292274695 292274532 1.870000e-19 108.0
19 TraesCS3D01G145100 chr2B 76.471 221 40 12 14 228 691497239 691497453 5.190000e-20 110.0
20 TraesCS3D01G145100 chr7D 80.128 156 22 8 14 165 205155886 205155736 1.870000e-19 108.0
21 TraesCS3D01G145100 chr4A 91.525 59 4 1 4551 4609 122735415 122735472 4.070000e-11 80.5
22 TraesCS3D01G145100 chr2A 78.261 115 21 3 4395 4506 368959214 368959327 2.450000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G145100 chr3D 108810883 108815783 4900 False 3063.266667 9051 100.000000 1 4901 3 chr3D.!!$F2 4900
1 TraesCS3D01G145100 chr3B 160271688 160276560 4872 False 1400.240000 6263 95.541800 42 4469 5 chr3B.!!$F1 4427
2 TraesCS3D01G145100 chr3A 121645628 121649178 3550 True 1658.800000 4807 94.314333 785 4845 3 chr3A.!!$R2 4060

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
254 256 0.464373 AGCATAGGCCAATGACCACG 60.464 55.000 5.01 0.00 42.56 4.94 F
725 1167 0.517316 GCACGAGCAGGGTGTAAAAG 59.483 55.000 0.00 0.00 41.58 2.27 F
959 1428 0.601046 GCCCAAGAAAAGCAAGCACC 60.601 55.000 0.00 0.00 0.00 5.01 F
1832 2310 0.739813 GCAACAATCGCCTCGTAGGT 60.740 55.000 3.38 0.00 37.80 3.08 F
2024 2502 1.353694 AGGAACCTGCAAGAGCTCATT 59.646 47.619 17.77 4.52 42.74 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1997 2475 0.035881 CTTGCAGGTTCCTCAGCTCA 59.964 55.000 0.00 0.00 0.00 4.26 R
2082 2560 1.534595 GCTCAAGTCCAGTTTGCTCAG 59.465 52.381 0.00 0.00 0.00 3.35 R
2732 3210 1.518056 CTGCTTCGGCCTTCTTTGCA 61.518 55.000 0.00 1.87 40.91 4.08 R
3108 3586 0.319211 GCATTGTGCAGCAGCTGAAA 60.319 50.000 27.39 16.21 44.26 2.69 R
4015 4512 0.930742 CTCGAAGCTATCCACGACGC 60.931 60.000 0.00 0.00 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.721087 AACCACTAGGCAGCATAGTTT 57.279 42.857 17.11 7.60 39.06 2.66
21 22 3.721087 ACCACTAGGCAGCATAGTTTT 57.279 42.857 17.11 4.37 39.06 2.43
22 23 4.837093 ACCACTAGGCAGCATAGTTTTA 57.163 40.909 17.11 0.00 39.06 1.52
23 24 5.174037 ACCACTAGGCAGCATAGTTTTAA 57.826 39.130 17.11 0.00 39.06 1.52
24 25 5.566469 ACCACTAGGCAGCATAGTTTTAAA 58.434 37.500 17.11 0.00 39.06 1.52
25 26 6.007703 ACCACTAGGCAGCATAGTTTTAAAA 58.992 36.000 17.11 0.00 39.06 1.52
26 27 6.492087 ACCACTAGGCAGCATAGTTTTAAAAA 59.508 34.615 17.11 0.00 39.06 1.94
27 28 6.806739 CCACTAGGCAGCATAGTTTTAAAAAC 59.193 38.462 17.11 0.00 31.05 2.43
28 29 6.806739 CACTAGGCAGCATAGTTTTAAAAACC 59.193 38.462 17.11 0.00 31.05 3.27
29 30 4.805219 AGGCAGCATAGTTTTAAAAACCG 58.195 39.130 1.31 0.00 0.00 4.44
30 31 4.521256 AGGCAGCATAGTTTTAAAAACCGA 59.479 37.500 1.31 0.00 0.00 4.69
31 32 5.010213 AGGCAGCATAGTTTTAAAAACCGAA 59.990 36.000 1.31 0.00 0.00 4.30
32 33 5.118050 GGCAGCATAGTTTTAAAAACCGAAC 59.882 40.000 1.31 0.00 0.00 3.95
33 34 5.118050 GCAGCATAGTTTTAAAAACCGAACC 59.882 40.000 1.31 0.00 0.00 3.62
34 35 5.341196 CAGCATAGTTTTAAAAACCGAACCG 59.659 40.000 1.31 0.00 0.00 4.44
61 62 2.186125 CCGGTAAGGCCTTCGGTC 59.814 66.667 28.92 16.15 37.92 4.79
64 65 1.681076 GGTAAGGCCTTCGGTCCAA 59.319 57.895 24.49 0.00 0.00 3.53
77 79 4.671880 TCGGTCCAATTTTTACATGTCG 57.328 40.909 0.00 0.00 0.00 4.35
104 106 0.953960 GGTTCACCGGTTCGATTGCT 60.954 55.000 2.97 0.00 0.00 3.91
112 114 3.171277 CCGGTTCGATTGCTGATTTTTC 58.829 45.455 0.00 0.00 0.00 2.29
123 125 8.649841 CGATTGCTGATTTTTCACAATACAAAT 58.350 29.630 0.00 0.00 31.40 2.32
217 219 9.462174 TTGTAAAACAACAAAGAATCATAGCTG 57.538 29.630 0.00 0.00 36.45 4.24
249 251 2.811307 GCCAAGCATAGGCCAATGA 58.189 52.632 5.01 0.00 46.50 2.57
254 256 0.464373 AGCATAGGCCAATGACCACG 60.464 55.000 5.01 0.00 42.56 4.94
261 263 2.040544 CCAATGACCACGACCTGGC 61.041 63.158 0.00 0.00 45.32 4.85
352 539 1.153823 CTAGTTGCAGGTCGGTCCG 60.154 63.158 4.39 4.39 41.99 4.79
357 544 2.280592 GCAGGTCGGTCCGTTGTT 60.281 61.111 11.88 0.00 41.99 2.83
406 593 1.209127 CATGTTCAACCGGCGGTTC 59.791 57.895 39.18 28.15 43.05 3.62
422 609 2.032675 CGGTTCGGTCCGGTTTTTAAAA 59.967 45.455 12.29 0.00 45.88 1.52
423 610 3.371168 GGTTCGGTCCGGTTTTTAAAAC 58.629 45.455 12.29 11.71 0.00 2.43
424 611 3.066621 GGTTCGGTCCGGTTTTTAAAACT 59.933 43.478 18.31 0.00 0.00 2.66
425 612 4.274705 GGTTCGGTCCGGTTTTTAAAACTA 59.725 41.667 18.31 4.15 0.00 2.24
428 615 3.189080 CGGTCCGGTTTTTAAAACTAGGG 59.811 47.826 23.55 19.29 0.00 3.53
429 616 3.057315 GGTCCGGTTTTTAAAACTAGGGC 60.057 47.826 23.55 22.70 0.00 5.19
430 617 3.569277 GTCCGGTTTTTAAAACTAGGGCA 59.431 43.478 23.55 11.31 0.00 5.36
431 618 3.822167 TCCGGTTTTTAAAACTAGGGCAG 59.178 43.478 23.55 8.69 0.00 4.85
438 625 3.628646 AAACTAGGGCAGGCAGGCG 62.629 63.158 0.00 0.00 45.36 5.52
471 658 5.116180 CACGGTCAAAATAGGCAAGAGATA 58.884 41.667 0.00 0.00 0.00 1.98
531 973 5.306678 AGGCAATACATGAAACAAGGGAAAA 59.693 36.000 0.00 0.00 0.00 2.29
546 988 2.171003 GGAAAACTCTCCCACCAATGG 58.829 52.381 0.00 0.00 46.81 3.16
582 1024 4.164221 CCCCTTGATGTCAGTAACCATAGT 59.836 45.833 0.00 0.00 0.00 2.12
687 1129 1.586154 CGGCGCCCAAGAAATTCACT 61.586 55.000 23.46 0.00 0.00 3.41
725 1167 0.517316 GCACGAGCAGGGTGTAAAAG 59.483 55.000 0.00 0.00 41.58 2.27
726 1168 1.878953 CACGAGCAGGGTGTAAAAGT 58.121 50.000 0.00 0.00 0.00 2.66
727 1169 2.868839 GCACGAGCAGGGTGTAAAAGTA 60.869 50.000 0.00 0.00 41.58 2.24
728 1170 3.395639 CACGAGCAGGGTGTAAAAGTAA 58.604 45.455 0.00 0.00 0.00 2.24
730 1172 4.273969 CACGAGCAGGGTGTAAAAGTAAAA 59.726 41.667 0.00 0.00 0.00 1.52
731 1173 4.514066 ACGAGCAGGGTGTAAAAGTAAAAG 59.486 41.667 0.00 0.00 0.00 2.27
732 1174 4.514066 CGAGCAGGGTGTAAAAGTAAAAGT 59.486 41.667 0.00 0.00 0.00 2.66
766 1208 9.829507 AAGAAGAGAATATCATTGTGTTAGAGG 57.170 33.333 0.00 0.00 0.00 3.69
796 1238 2.551721 CGATTAGCCCCTCAATGATGCT 60.552 50.000 7.14 7.14 36.11 3.79
828 1270 3.275617 ACTACTTGTGGTGCAAAGTGA 57.724 42.857 11.01 0.00 36.53 3.41
872 1315 1.996291 CTTTCCCCTTTCCCCTCTCTT 59.004 52.381 0.00 0.00 0.00 2.85
940 1409 2.103143 CGTGCTCTCTGCCTACCG 59.897 66.667 0.00 0.00 42.00 4.02
959 1428 0.601046 GCCCAAGAAAAGCAAGCACC 60.601 55.000 0.00 0.00 0.00 5.01
1058 1536 4.038080 CGCCGCCGCCTTTTTCTT 62.038 61.111 0.00 0.00 0.00 2.52
1061 1539 1.956802 CCGCCGCCTTTTTCTTTCT 59.043 52.632 0.00 0.00 0.00 2.52
1606 2084 1.025812 CTCTCCGCCTATGAGAACGT 58.974 55.000 0.00 0.00 38.34 3.99
1682 2160 1.142688 ACCTCCACTCCAATGGCCTT 61.143 55.000 3.32 0.00 39.85 4.35
1832 2310 0.739813 GCAACAATCGCCTCGTAGGT 60.740 55.000 3.38 0.00 37.80 3.08
1880 2358 2.054799 ACCAGCCTGACCTACTTTGAA 58.945 47.619 0.00 0.00 0.00 2.69
1918 2396 3.161450 TGGCAGTATCCCCGCTCC 61.161 66.667 0.00 0.00 0.00 4.70
1997 2475 2.672996 GTGCCGGACATGCTTGGT 60.673 61.111 5.05 0.00 0.00 3.67
2024 2502 1.353694 AGGAACCTGCAAGAGCTCATT 59.646 47.619 17.77 4.52 42.74 2.57
2732 3210 2.439104 GCAGGAGAAGGAGGCCGAT 61.439 63.158 0.00 0.00 0.00 4.18
2756 3234 3.017581 AAGGCCGAAGCAGGGGAT 61.018 61.111 0.00 0.00 42.56 3.85
2954 3432 1.795286 GTCAAGAAGCTGAAGTCGGTG 59.205 52.381 0.00 0.00 0.00 4.94
3173 3651 2.125350 CCTGACTGGCCGAAGCTC 60.125 66.667 0.00 0.00 39.73 4.09
3443 3921 2.055310 TATGCCTACTCGACGTGCCG 62.055 60.000 0.00 0.00 0.00 5.69
3446 3924 2.403987 CTACTCGACGTGCCGGAG 59.596 66.667 5.05 0.00 0.00 4.63
3563 4052 0.616964 TGCTGCTGGAGATCCTGACT 60.617 55.000 9.72 0.00 37.15 3.41
4014 4511 0.599558 TGCCAGCATCAAAGAACTGC 59.400 50.000 0.00 0.00 36.15 4.40
4015 4512 0.455633 GCCAGCATCAAAGAACTGCG 60.456 55.000 0.00 0.00 40.78 5.18
4055 4552 4.450976 AGCATTGTTCGGCATCATTACTA 58.549 39.130 0.00 0.00 0.00 1.82
4157 4658 3.753272 GTCAAGTGACATGTGCACCTTAT 59.247 43.478 15.69 0.00 44.18 1.73
4158 4659 4.216257 GTCAAGTGACATGTGCACCTTATT 59.784 41.667 15.69 8.72 44.18 1.40
4159 4660 4.826733 TCAAGTGACATGTGCACCTTATTT 59.173 37.500 15.69 0.00 36.95 1.40
4160 4661 6.000840 TCAAGTGACATGTGCACCTTATTTA 58.999 36.000 15.69 0.00 36.95 1.40
4164 4665 6.264292 AGTGACATGTGCACCTTATTTAAACA 59.736 34.615 15.69 0.00 36.95 2.83
4202 4705 2.028130 AGCAAGTCTAGCATAGTCGCT 58.972 47.619 0.00 0.00 46.26 4.93
4215 4718 6.071320 AGCATAGTCGCTATATCCATATCCA 58.929 40.000 0.00 0.00 41.55 3.41
4222 4725 3.134804 GCTATATCCATATCCACGGCCTT 59.865 47.826 0.00 0.00 0.00 4.35
4236 4739 2.635915 ACGGCCTTCATAATAATCGGGA 59.364 45.455 0.00 0.00 0.00 5.14
4243 4746 5.431765 CTTCATAATAATCGGGATCAGGGG 58.568 45.833 0.00 0.00 0.00 4.79
4245 4748 2.433444 AATAATCGGGATCAGGGGGA 57.567 50.000 0.00 0.00 0.00 4.81
4253 4756 2.770048 ATCAGGGGGAAGAGCGGG 60.770 66.667 0.00 0.00 0.00 6.13
4284 4787 2.254152 AGGACTGCTCCTTGATGGTA 57.746 50.000 0.00 0.00 45.77 3.25
4299 4802 2.234896 TGGTATGTGGGGAAGTACGA 57.765 50.000 0.00 0.00 0.00 3.43
4331 4834 2.040544 GGGCGTCATGGTGAAGGTG 61.041 63.158 0.00 0.00 0.00 4.00
4336 4839 2.910199 CGTCATGGTGAAGGTGATGAT 58.090 47.619 0.00 0.00 32.03 2.45
4338 4841 3.679639 CGTCATGGTGAAGGTGATGATGA 60.680 47.826 0.00 0.00 34.91 2.92
4340 4843 2.408271 TGGTGAAGGTGATGATGAGC 57.592 50.000 0.00 0.00 0.00 4.26
4341 4844 1.911357 TGGTGAAGGTGATGATGAGCT 59.089 47.619 0.00 0.00 0.00 4.09
4342 4845 2.286872 GGTGAAGGTGATGATGAGCTG 58.713 52.381 0.00 0.00 0.00 4.24
4344 4847 2.093288 GTGAAGGTGATGATGAGCTGGA 60.093 50.000 0.00 0.00 0.00 3.86
4345 4848 2.093288 TGAAGGTGATGATGAGCTGGAC 60.093 50.000 0.00 0.00 0.00 4.02
4346 4849 0.463204 AGGTGATGATGAGCTGGACG 59.537 55.000 0.00 0.00 0.00 4.79
4352 4855 2.878743 GATGAGCTGGACGTCATCG 58.121 57.895 18.91 5.76 39.70 3.84
4363 4866 3.250521 TGGACGTCATCGGGTTTTAAAAC 59.749 43.478 20.58 20.58 41.85 2.43
4376 4879 5.715279 GGGTTTTAAAACTATCAGAGGGCTT 59.285 40.000 25.89 0.00 38.89 4.35
4377 4880 6.210784 GGGTTTTAAAACTATCAGAGGGCTTT 59.789 38.462 25.89 0.00 38.89 3.51
4378 4881 7.395206 GGGTTTTAAAACTATCAGAGGGCTTTA 59.605 37.037 25.89 0.00 38.89 1.85
4379 4882 8.459635 GGTTTTAAAACTATCAGAGGGCTTTAG 58.540 37.037 25.89 0.00 38.89 1.85
4380 4883 8.459635 GTTTTAAAACTATCAGAGGGCTTTAGG 58.540 37.037 21.27 0.00 36.03 2.69
4381 4884 4.779993 AAACTATCAGAGGGCTTTAGGG 57.220 45.455 0.00 0.00 0.00 3.53
4382 4885 3.708236 ACTATCAGAGGGCTTTAGGGA 57.292 47.619 0.00 0.00 0.00 4.20
4383 4886 4.008916 ACTATCAGAGGGCTTTAGGGAA 57.991 45.455 0.00 0.00 0.00 3.97
4389 4892 3.099905 AGAGGGCTTTAGGGAAAAATGC 58.900 45.455 0.00 0.00 0.00 3.56
4419 4922 1.673337 GGGAAACCGAACGGGAAGG 60.673 63.158 17.44 0.00 43.64 3.46
4421 4924 1.673337 GAAACCGAACGGGAAGGGG 60.673 63.158 17.44 0.00 39.97 4.79
4425 4928 3.001406 CGAACGGGAAGGGGAGGT 61.001 66.667 0.00 0.00 0.00 3.85
4428 4931 1.151877 AACGGGAAGGGGAGGTTCT 60.152 57.895 0.00 0.00 0.00 3.01
4435 4939 2.610859 GGGGAGGTTCTGGCTGGA 60.611 66.667 0.00 0.00 0.00 3.86
4446 4950 2.597455 TCTGGCTGGAAAAGAAAAGGG 58.403 47.619 0.00 0.00 0.00 3.95
4452 4956 2.695147 CTGGAAAAGAAAAGGGTGCACT 59.305 45.455 17.98 0.00 0.00 4.40
4454 4958 2.430694 GGAAAAGAAAAGGGTGCACTGT 59.569 45.455 17.98 0.62 0.00 3.55
4465 4969 2.123468 GCACTGTGGGGTGGGTTT 60.123 61.111 10.21 0.00 37.65 3.27
4482 4986 2.709170 TTTTTGTCCGTCCGCATGT 58.291 47.368 0.00 0.00 0.00 3.21
4483 4987 1.025812 TTTTTGTCCGTCCGCATGTT 58.974 45.000 0.00 0.00 0.00 2.71
4484 4988 1.880271 TTTTGTCCGTCCGCATGTTA 58.120 45.000 0.00 0.00 0.00 2.41
4485 4989 1.149987 TTTGTCCGTCCGCATGTTAC 58.850 50.000 0.00 0.00 0.00 2.50
4486 4990 0.033642 TTGTCCGTCCGCATGTTACA 59.966 50.000 0.00 0.00 0.00 2.41
4487 4991 0.248012 TGTCCGTCCGCATGTTACAT 59.752 50.000 0.00 0.00 0.00 2.29
4488 4992 1.477295 TGTCCGTCCGCATGTTACATA 59.523 47.619 0.00 0.00 0.00 2.29
4489 4993 2.101750 TGTCCGTCCGCATGTTACATAT 59.898 45.455 0.00 0.00 0.00 1.78
4490 4994 3.318557 TGTCCGTCCGCATGTTACATATA 59.681 43.478 0.00 0.00 0.00 0.86
4491 4995 4.202131 TGTCCGTCCGCATGTTACATATAA 60.202 41.667 0.00 0.00 0.00 0.98
4492 4996 4.384846 GTCCGTCCGCATGTTACATATAAG 59.615 45.833 0.00 0.00 0.00 1.73
4493 4997 4.278919 TCCGTCCGCATGTTACATATAAGA 59.721 41.667 0.00 0.00 0.00 2.10
4494 4998 5.047590 TCCGTCCGCATGTTACATATAAGAT 60.048 40.000 0.00 0.00 0.00 2.40
4495 4999 5.062183 CCGTCCGCATGTTACATATAAGATG 59.938 44.000 0.00 0.00 42.36 2.90
4496 5000 5.062183 CGTCCGCATGTTACATATAAGATGG 59.938 44.000 3.36 0.00 40.68 3.51
4497 5001 4.935205 TCCGCATGTTACATATAAGATGGC 59.065 41.667 3.36 0.00 40.68 4.40
4498 5002 4.201714 CCGCATGTTACATATAAGATGGCG 60.202 45.833 13.04 13.04 40.68 5.69
4499 5003 4.201714 CGCATGTTACATATAAGATGGCGG 60.202 45.833 12.43 0.00 40.68 6.13
4500 5004 4.935205 GCATGTTACATATAAGATGGCGGA 59.065 41.667 3.36 0.00 40.68 5.54
4501 5005 5.586243 GCATGTTACATATAAGATGGCGGAT 59.414 40.000 3.36 0.00 40.68 4.18
4502 5006 6.761242 GCATGTTACATATAAGATGGCGGATA 59.239 38.462 3.36 0.00 40.68 2.59
4503 5007 7.042456 GCATGTTACATATAAGATGGCGGATAG 60.042 40.741 3.36 0.00 40.68 2.08
4504 5008 7.476540 TGTTACATATAAGATGGCGGATAGT 57.523 36.000 0.00 0.00 0.00 2.12
4505 5009 7.544622 TGTTACATATAAGATGGCGGATAGTC 58.455 38.462 0.00 0.00 0.00 2.59
4506 5010 7.396339 TGTTACATATAAGATGGCGGATAGTCT 59.604 37.037 0.00 0.00 0.00 3.24
4507 5011 6.214191 ACATATAAGATGGCGGATAGTCTG 57.786 41.667 0.00 0.00 0.00 3.51
4508 5012 5.952347 ACATATAAGATGGCGGATAGTCTGA 59.048 40.000 0.00 0.00 0.00 3.27
4509 5013 6.437477 ACATATAAGATGGCGGATAGTCTGAA 59.563 38.462 0.00 0.00 0.00 3.02
4510 5014 7.124901 ACATATAAGATGGCGGATAGTCTGAAT 59.875 37.037 0.00 0.00 0.00 2.57
4511 5015 8.633561 CATATAAGATGGCGGATAGTCTGAATA 58.366 37.037 0.00 0.00 0.00 1.75
4512 5016 5.808366 AAGATGGCGGATAGTCTGAATAA 57.192 39.130 0.00 0.00 0.00 1.40
4513 5017 6.365970 AAGATGGCGGATAGTCTGAATAAT 57.634 37.500 0.00 0.00 0.00 1.28
4514 5018 5.971763 AGATGGCGGATAGTCTGAATAATC 58.028 41.667 0.00 0.00 0.00 1.75
4515 5019 5.481824 AGATGGCGGATAGTCTGAATAATCA 59.518 40.000 0.00 0.00 0.00 2.57
4516 5020 5.745312 TGGCGGATAGTCTGAATAATCAT 57.255 39.130 0.00 0.00 34.37 2.45
4517 5021 6.850752 TGGCGGATAGTCTGAATAATCATA 57.149 37.500 0.00 0.00 34.37 2.15
4518 5022 7.423844 TGGCGGATAGTCTGAATAATCATAT 57.576 36.000 0.00 0.00 34.37 1.78
4519 5023 7.851228 TGGCGGATAGTCTGAATAATCATATT 58.149 34.615 0.00 0.00 34.37 1.28
4520 5024 8.321353 TGGCGGATAGTCTGAATAATCATATTT 58.679 33.333 0.00 0.00 34.37 1.40
4521 5025 9.167311 GGCGGATAGTCTGAATAATCATATTTT 57.833 33.333 0.00 0.00 34.37 1.82
4543 5047 8.827832 TTTTTCTCTCACATATGGAATGGATT 57.172 30.769 7.80 0.00 0.00 3.01
4544 5048 8.827832 TTTTCTCTCACATATGGAATGGATTT 57.172 30.769 7.80 0.00 0.00 2.17
4545 5049 9.919416 TTTTCTCTCACATATGGAATGGATTTA 57.081 29.630 7.80 0.00 0.00 1.40
4554 5058 9.193806 ACATATGGAATGGATTTATAAGATGGC 57.806 33.333 7.80 0.00 0.00 4.40
4555 5059 6.764308 ATGGAATGGATTTATAAGATGGCG 57.236 37.500 0.00 0.00 0.00 5.69
4556 5060 5.009631 TGGAATGGATTTATAAGATGGCGG 58.990 41.667 0.00 0.00 0.00 6.13
4557 5061 5.222027 TGGAATGGATTTATAAGATGGCGGA 60.222 40.000 0.00 0.00 0.00 5.54
4558 5062 5.888161 GGAATGGATTTATAAGATGGCGGAT 59.112 40.000 0.00 0.00 0.00 4.18
4559 5063 7.054124 GGAATGGATTTATAAGATGGCGGATA 58.946 38.462 0.00 0.00 0.00 2.59
4560 5064 7.227512 GGAATGGATTTATAAGATGGCGGATAG 59.772 40.741 0.00 0.00 0.00 2.08
4561 5065 6.620877 TGGATTTATAAGATGGCGGATAGT 57.379 37.500 0.00 0.00 0.00 2.12
4562 5066 6.640518 TGGATTTATAAGATGGCGGATAGTC 58.359 40.000 0.00 0.00 0.00 2.59
4563 5067 6.440647 TGGATTTATAAGATGGCGGATAGTCT 59.559 38.462 0.00 0.00 0.00 3.24
4564 5068 6.758886 GGATTTATAAGATGGCGGATAGTCTG 59.241 42.308 0.00 0.00 0.00 3.51
4565 5069 6.911250 TTTATAAGATGGCGGATAGTCTGA 57.089 37.500 0.00 0.00 0.00 3.27
4566 5070 6.911250 TTATAAGATGGCGGATAGTCTGAA 57.089 37.500 0.00 0.00 0.00 3.02
4567 5071 3.460857 AAGATGGCGGATAGTCTGAAC 57.539 47.619 0.00 0.00 0.00 3.18
4568 5072 2.388735 AGATGGCGGATAGTCTGAACA 58.611 47.619 0.00 0.00 0.00 3.18
4569 5073 2.766263 AGATGGCGGATAGTCTGAACAA 59.234 45.455 0.00 0.00 0.00 2.83
4570 5074 3.389329 AGATGGCGGATAGTCTGAACAAT 59.611 43.478 0.00 0.00 0.00 2.71
4571 5075 3.179443 TGGCGGATAGTCTGAACAATC 57.821 47.619 0.00 0.00 0.00 2.67
4572 5076 2.499693 TGGCGGATAGTCTGAACAATCA 59.500 45.455 0.00 0.00 0.00 2.57
4573 5077 3.134623 TGGCGGATAGTCTGAACAATCAT 59.865 43.478 0.00 0.00 34.37 2.45
4574 5078 4.343814 TGGCGGATAGTCTGAACAATCATA 59.656 41.667 0.00 0.00 34.37 2.15
4575 5079 5.012046 TGGCGGATAGTCTGAACAATCATAT 59.988 40.000 0.00 0.00 34.37 1.78
4576 5080 5.934625 GGCGGATAGTCTGAACAATCATATT 59.065 40.000 0.00 0.00 34.37 1.28
4577 5081 6.428159 GGCGGATAGTCTGAACAATCATATTT 59.572 38.462 0.00 0.00 34.37 1.40
4578 5082 7.360438 GGCGGATAGTCTGAACAATCATATTTC 60.360 40.741 0.00 0.00 34.37 2.17
4579 5083 7.386299 GCGGATAGTCTGAACAATCATATTTCT 59.614 37.037 0.00 0.00 34.37 2.52
4580 5084 9.265901 CGGATAGTCTGAACAATCATATTTCTT 57.734 33.333 0.00 0.00 34.37 2.52
4584 5088 8.729805 AGTCTGAACAATCATATTTCTTCCTC 57.270 34.615 0.00 0.00 34.37 3.71
4585 5089 8.324306 AGTCTGAACAATCATATTTCTTCCTCA 58.676 33.333 0.00 0.00 34.37 3.86
4586 5090 8.394121 GTCTGAACAATCATATTTCTTCCTCAC 58.606 37.037 0.00 0.00 34.37 3.51
4587 5091 8.102676 TCTGAACAATCATATTTCTTCCTCACA 58.897 33.333 0.00 0.00 34.37 3.58
4588 5092 8.812513 TGAACAATCATATTTCTTCCTCACAT 57.187 30.769 0.00 0.00 0.00 3.21
4589 5093 9.904198 TGAACAATCATATTTCTTCCTCACATA 57.096 29.630 0.00 0.00 0.00 2.29
4592 5096 9.293404 ACAATCATATTTCTTCCTCACATATGG 57.707 33.333 7.80 0.00 31.39 2.74
4593 5097 8.737175 CAATCATATTTCTTCCTCACATATGGG 58.263 37.037 7.80 2.34 31.39 4.00
4594 5098 7.631510 TCATATTTCTTCCTCACATATGGGA 57.368 36.000 7.60 7.60 31.39 4.37
4595 5099 8.223378 TCATATTTCTTCCTCACATATGGGAT 57.777 34.615 8.42 0.00 31.39 3.85
4596 5100 8.105197 TCATATTTCTTCCTCACATATGGGATG 58.895 37.037 8.42 5.97 31.39 3.51
4597 5101 4.712051 TTCTTCCTCACATATGGGATGG 57.288 45.455 8.42 12.00 0.00 3.51
4598 5102 3.940335 TCTTCCTCACATATGGGATGGA 58.060 45.455 17.33 17.33 0.00 3.41
4599 5103 4.506354 TCTTCCTCACATATGGGATGGAT 58.494 43.478 20.23 0.00 29.36 3.41
4600 5104 4.915809 TCTTCCTCACATATGGGATGGATT 59.084 41.667 20.23 0.00 29.36 3.01
4601 5105 5.373555 TCTTCCTCACATATGGGATGGATTT 59.626 40.000 20.23 0.00 29.36 2.17
4602 5106 4.989277 TCCTCACATATGGGATGGATTTG 58.011 43.478 17.33 2.50 0.00 2.32
4603 5107 4.084287 CCTCACATATGGGATGGATTTGG 58.916 47.826 8.42 0.10 0.00 3.28
4604 5108 4.084287 CTCACATATGGGATGGATTTGGG 58.916 47.826 8.42 0.00 0.00 4.12
4605 5109 3.167485 CACATATGGGATGGATTTGGGG 58.833 50.000 7.80 0.00 0.00 4.96
4606 5110 2.112331 ACATATGGGATGGATTTGGGGG 59.888 50.000 7.80 0.00 0.00 5.40
4607 5111 2.237173 TATGGGATGGATTTGGGGGA 57.763 50.000 0.00 0.00 0.00 4.81
4608 5112 0.862554 ATGGGATGGATTTGGGGGAG 59.137 55.000 0.00 0.00 0.00 4.30
4609 5113 0.554865 TGGGATGGATTTGGGGGAGT 60.555 55.000 0.00 0.00 0.00 3.85
4610 5114 0.186143 GGGATGGATTTGGGGGAGTC 59.814 60.000 0.00 0.00 0.00 3.36
4611 5115 1.226311 GGATGGATTTGGGGGAGTCT 58.774 55.000 0.00 0.00 0.00 3.24
4612 5116 1.133668 GGATGGATTTGGGGGAGTCTG 60.134 57.143 0.00 0.00 0.00 3.51
4613 5117 1.846439 GATGGATTTGGGGGAGTCTGA 59.154 52.381 0.00 0.00 0.00 3.27
4614 5118 1.753903 TGGATTTGGGGGAGTCTGAA 58.246 50.000 0.00 0.00 0.00 3.02
4615 5119 1.354368 TGGATTTGGGGGAGTCTGAAC 59.646 52.381 0.00 0.00 0.00 3.18
4616 5120 1.636003 GGATTTGGGGGAGTCTGAACT 59.364 52.381 0.00 0.00 38.88 3.01
4617 5121 2.844348 GGATTTGGGGGAGTCTGAACTA 59.156 50.000 0.00 0.00 35.28 2.24
4618 5122 3.459969 GGATTTGGGGGAGTCTGAACTAT 59.540 47.826 0.00 0.00 35.28 2.12
4619 5123 4.658901 GGATTTGGGGGAGTCTGAACTATA 59.341 45.833 0.00 0.00 35.28 1.31
4620 5124 5.454897 GGATTTGGGGGAGTCTGAACTATAC 60.455 48.000 0.00 0.00 35.28 1.47
4621 5125 3.769189 TGGGGGAGTCTGAACTATACA 57.231 47.619 0.00 0.00 35.28 2.29
4622 5126 3.371965 TGGGGGAGTCTGAACTATACAC 58.628 50.000 0.00 0.00 35.28 2.90
4623 5127 3.245839 TGGGGGAGTCTGAACTATACACA 60.246 47.826 0.00 0.00 35.28 3.72
4624 5128 3.967987 GGGGGAGTCTGAACTATACACAT 59.032 47.826 0.00 0.00 35.28 3.21
4625 5129 4.202264 GGGGGAGTCTGAACTATACACATG 60.202 50.000 0.00 0.00 35.28 3.21
4626 5130 4.202264 GGGGAGTCTGAACTATACACATGG 60.202 50.000 0.00 0.00 35.28 3.66
4627 5131 4.406003 GGGAGTCTGAACTATACACATGGT 59.594 45.833 0.00 0.00 35.28 3.55
4628 5132 5.104900 GGGAGTCTGAACTATACACATGGTT 60.105 44.000 0.00 0.00 38.44 3.67
4629 5133 5.812642 GGAGTCTGAACTATACACATGGTTG 59.187 44.000 0.00 0.00 36.12 3.77
4630 5134 5.734720 AGTCTGAACTATACACATGGTTGG 58.265 41.667 0.00 0.00 36.12 3.77
4631 5135 5.483937 AGTCTGAACTATACACATGGTTGGA 59.516 40.000 0.00 0.00 36.12 3.53
4632 5136 5.581085 GTCTGAACTATACACATGGTTGGAC 59.419 44.000 0.00 0.00 36.12 4.02
4633 5137 5.483937 TCTGAACTATACACATGGTTGGACT 59.516 40.000 0.00 0.00 36.12 3.85
4634 5138 5.487433 TGAACTATACACATGGTTGGACTG 58.513 41.667 0.00 0.00 36.12 3.51
4635 5139 5.012664 TGAACTATACACATGGTTGGACTGT 59.987 40.000 0.00 0.00 36.12 3.55
4636 5140 4.832248 ACTATACACATGGTTGGACTGTG 58.168 43.478 0.00 0.00 44.51 3.66
4637 5141 2.559698 TACACATGGTTGGACTGTGG 57.440 50.000 0.00 0.00 43.53 4.17
4638 5142 0.843309 ACACATGGTTGGACTGTGGA 59.157 50.000 0.00 0.00 43.53 4.02
4639 5143 1.202806 ACACATGGTTGGACTGTGGAG 60.203 52.381 0.00 0.00 43.53 3.86
4640 5144 1.072173 CACATGGTTGGACTGTGGAGA 59.928 52.381 0.00 0.00 37.27 3.71
4641 5145 1.349026 ACATGGTTGGACTGTGGAGAG 59.651 52.381 0.00 0.00 0.00 3.20
4642 5146 0.326264 ATGGTTGGACTGTGGAGAGC 59.674 55.000 0.00 0.00 0.00 4.09
4643 5147 0.764369 TGGTTGGACTGTGGAGAGCT 60.764 55.000 0.00 0.00 0.00 4.09
4644 5148 0.398318 GGTTGGACTGTGGAGAGCTT 59.602 55.000 0.00 0.00 0.00 3.74
4645 5149 1.517242 GTTGGACTGTGGAGAGCTTG 58.483 55.000 0.00 0.00 0.00 4.01
4646 5150 1.131638 TTGGACTGTGGAGAGCTTGT 58.868 50.000 0.00 0.00 0.00 3.16
4647 5151 0.681733 TGGACTGTGGAGAGCTTGTC 59.318 55.000 0.00 0.00 0.00 3.18
4648 5152 0.972883 GGACTGTGGAGAGCTTGTCT 59.027 55.000 0.00 0.00 38.71 3.41
4649 5153 1.337635 GGACTGTGGAGAGCTTGTCTG 60.338 57.143 0.00 0.00 34.71 3.51
4650 5154 1.615883 GACTGTGGAGAGCTTGTCTGA 59.384 52.381 0.00 0.00 34.71 3.27
4651 5155 1.342819 ACTGTGGAGAGCTTGTCTGAC 59.657 52.381 0.00 0.00 34.71 3.51
4652 5156 0.315251 TGTGGAGAGCTTGTCTGACG 59.685 55.000 2.98 0.00 34.71 4.35
4653 5157 1.011451 GTGGAGAGCTTGTCTGACGC 61.011 60.000 2.98 1.43 34.71 5.19
4654 5158 1.446966 GGAGAGCTTGTCTGACGCC 60.447 63.158 2.98 0.00 34.71 5.68
4655 5159 1.589113 GAGAGCTTGTCTGACGCCT 59.411 57.895 2.98 0.00 34.71 5.52
4656 5160 0.735632 GAGAGCTTGTCTGACGCCTG 60.736 60.000 2.98 0.00 34.71 4.85
4657 5161 1.005630 GAGCTTGTCTGACGCCTGT 60.006 57.895 2.98 0.00 0.00 4.00
4658 5162 0.601311 GAGCTTGTCTGACGCCTGTT 60.601 55.000 2.98 0.00 0.00 3.16
4659 5163 0.179045 AGCTTGTCTGACGCCTGTTT 60.179 50.000 2.98 0.00 0.00 2.83
4660 5164 0.040958 GCTTGTCTGACGCCTGTTTG 60.041 55.000 2.98 0.00 0.00 2.93
4661 5165 1.581934 CTTGTCTGACGCCTGTTTGA 58.418 50.000 2.98 0.00 0.00 2.69
4662 5166 2.146342 CTTGTCTGACGCCTGTTTGAT 58.854 47.619 2.98 0.00 0.00 2.57
4663 5167 1.511850 TGTCTGACGCCTGTTTGATG 58.488 50.000 2.98 0.00 0.00 3.07
4664 5168 1.202639 TGTCTGACGCCTGTTTGATGT 60.203 47.619 2.98 0.00 0.00 3.06
4665 5169 1.461127 GTCTGACGCCTGTTTGATGTC 59.539 52.381 0.00 0.00 0.00 3.06
4666 5170 0.798776 CTGACGCCTGTTTGATGTCC 59.201 55.000 0.00 0.00 0.00 4.02
4667 5171 0.107643 TGACGCCTGTTTGATGTCCA 59.892 50.000 0.00 0.00 0.00 4.02
4668 5172 1.271325 TGACGCCTGTTTGATGTCCAT 60.271 47.619 0.00 0.00 0.00 3.41
4669 5173 2.027653 TGACGCCTGTTTGATGTCCATA 60.028 45.455 0.00 0.00 0.00 2.74
4670 5174 2.351726 GACGCCTGTTTGATGTCCATAC 59.648 50.000 0.00 0.00 0.00 2.39
4671 5175 2.290008 ACGCCTGTTTGATGTCCATACA 60.290 45.455 0.00 0.00 40.69 2.29
4673 5177 3.242837 CGCCTGTTTGATGTCCATACATG 60.243 47.826 0.00 0.00 46.49 3.21
4674 5178 3.489738 GCCTGTTTGATGTCCATACATGC 60.490 47.826 0.00 0.00 46.49 4.06
4675 5179 3.067180 CCTGTTTGATGTCCATACATGCC 59.933 47.826 0.00 0.00 46.49 4.40
4676 5180 3.694926 TGTTTGATGTCCATACATGCCA 58.305 40.909 0.00 0.00 46.49 4.92
4677 5181 4.085009 TGTTTGATGTCCATACATGCCAA 58.915 39.130 0.00 0.00 46.49 4.52
4678 5182 4.158209 TGTTTGATGTCCATACATGCCAAG 59.842 41.667 0.00 0.00 46.49 3.61
4679 5183 3.929955 TGATGTCCATACATGCCAAGA 57.070 42.857 0.00 0.00 46.49 3.02
4680 5184 3.544684 TGATGTCCATACATGCCAAGAC 58.455 45.455 0.00 0.00 46.49 3.01
4681 5185 2.022764 TGTCCATACATGCCAAGACG 57.977 50.000 0.00 0.00 0.00 4.18
4682 5186 1.277842 TGTCCATACATGCCAAGACGT 59.722 47.619 0.00 0.00 0.00 4.34
4683 5187 2.498078 TGTCCATACATGCCAAGACGTA 59.502 45.455 0.00 0.00 0.00 3.57
4684 5188 3.133901 TGTCCATACATGCCAAGACGTAT 59.866 43.478 0.00 0.00 0.00 3.06
4685 5189 3.494626 GTCCATACATGCCAAGACGTATG 59.505 47.826 0.00 0.00 40.46 2.39
4686 5190 2.224079 CCATACATGCCAAGACGTATGC 59.776 50.000 0.00 0.00 39.78 3.14
4687 5191 1.566404 TACATGCCAAGACGTATGCG 58.434 50.000 0.19 0.19 44.93 4.73
4688 5192 1.089481 ACATGCCAAGACGTATGCGG 61.089 55.000 8.39 0.00 43.45 5.69
4689 5193 1.523711 ATGCCAAGACGTATGCGGG 60.524 57.895 8.39 0.00 43.45 6.13
4690 5194 1.966901 ATGCCAAGACGTATGCGGGA 61.967 55.000 8.39 0.00 43.45 5.14
4691 5195 1.448893 GCCAAGACGTATGCGGGAA 60.449 57.895 8.39 0.00 43.45 3.97
4692 5196 1.022451 GCCAAGACGTATGCGGGAAA 61.022 55.000 8.39 0.00 43.45 3.13
4693 5197 1.444836 CCAAGACGTATGCGGGAAAA 58.555 50.000 8.39 0.00 43.45 2.29
4694 5198 1.807742 CCAAGACGTATGCGGGAAAAA 59.192 47.619 8.39 0.00 43.45 1.94
4695 5199 2.422127 CCAAGACGTATGCGGGAAAAAT 59.578 45.455 8.39 0.00 43.45 1.82
4696 5200 3.425404 CAAGACGTATGCGGGAAAAATG 58.575 45.455 8.39 0.00 43.45 2.32
4697 5201 2.980568 AGACGTATGCGGGAAAAATGA 58.019 42.857 8.39 0.00 43.45 2.57
4698 5202 3.340034 AGACGTATGCGGGAAAAATGAA 58.660 40.909 8.39 0.00 43.45 2.57
4699 5203 3.126343 AGACGTATGCGGGAAAAATGAAC 59.874 43.478 8.39 0.00 43.45 3.18
4700 5204 3.078837 ACGTATGCGGGAAAAATGAACT 58.921 40.909 8.39 0.00 43.45 3.01
4701 5205 3.504520 ACGTATGCGGGAAAAATGAACTT 59.495 39.130 8.39 0.00 43.45 2.66
4702 5206 4.022676 ACGTATGCGGGAAAAATGAACTTT 60.023 37.500 8.39 0.00 43.45 2.66
4703 5207 4.323336 CGTATGCGGGAAAAATGAACTTTG 59.677 41.667 0.00 0.00 0.00 2.77
4704 5208 4.599047 ATGCGGGAAAAATGAACTTTGA 57.401 36.364 0.00 0.00 0.00 2.69
4705 5209 3.712187 TGCGGGAAAAATGAACTTTGAC 58.288 40.909 0.00 0.00 0.00 3.18
4706 5210 3.383185 TGCGGGAAAAATGAACTTTGACT 59.617 39.130 0.00 0.00 0.00 3.41
4707 5211 4.142049 TGCGGGAAAAATGAACTTTGACTT 60.142 37.500 0.00 0.00 0.00 3.01
4708 5212 4.808895 GCGGGAAAAATGAACTTTGACTTT 59.191 37.500 0.00 0.00 0.00 2.66
4709 5213 5.276820 GCGGGAAAAATGAACTTTGACTTTG 60.277 40.000 0.00 0.00 0.00 2.77
4710 5214 5.234116 CGGGAAAAATGAACTTTGACTTTGG 59.766 40.000 0.00 0.00 0.00 3.28
4711 5215 6.112734 GGGAAAAATGAACTTTGACTTTGGT 58.887 36.000 0.00 0.00 0.00 3.67
4712 5216 6.037062 GGGAAAAATGAACTTTGACTTTGGTG 59.963 38.462 0.00 0.00 0.00 4.17
4713 5217 6.816140 GGAAAAATGAACTTTGACTTTGGTGA 59.184 34.615 0.00 0.00 0.00 4.02
4714 5218 7.201522 GGAAAAATGAACTTTGACTTTGGTGAC 60.202 37.037 0.00 0.00 0.00 3.67
4715 5219 5.913137 AATGAACTTTGACTTTGGTGACA 57.087 34.783 0.00 0.00 39.83 3.58
4716 5220 6.469782 AATGAACTTTGACTTTGGTGACAT 57.530 33.333 0.00 0.00 42.32 3.06
4717 5221 7.581213 AATGAACTTTGACTTTGGTGACATA 57.419 32.000 0.00 0.00 42.32 2.29
4718 5222 6.371809 TGAACTTTGACTTTGGTGACATAC 57.628 37.500 0.00 0.00 42.32 2.39
4731 5235 5.957842 GGTGACATACCTCATTTGTTTGA 57.042 39.130 0.00 0.00 46.51 2.69
4732 5236 6.515272 GGTGACATACCTCATTTGTTTGAT 57.485 37.500 0.00 0.00 46.51 2.57
4733 5237 6.924111 GGTGACATACCTCATTTGTTTGATT 58.076 36.000 0.00 0.00 46.51 2.57
4734 5238 7.029563 GGTGACATACCTCATTTGTTTGATTC 58.970 38.462 0.00 0.00 46.51 2.52
4735 5239 7.309133 GGTGACATACCTCATTTGTTTGATTCA 60.309 37.037 0.00 0.00 46.51 2.57
4736 5240 8.246180 GTGACATACCTCATTTGTTTGATTCAT 58.754 33.333 0.00 0.00 0.00 2.57
4737 5241 8.805175 TGACATACCTCATTTGTTTGATTCATT 58.195 29.630 0.00 0.00 0.00 2.57
4738 5242 9.643693 GACATACCTCATTTGTTTGATTCATTT 57.356 29.630 0.00 0.00 0.00 2.32
4739 5243 9.643693 ACATACCTCATTTGTTTGATTCATTTC 57.356 29.630 0.00 0.00 0.00 2.17
4740 5244 8.800972 CATACCTCATTTGTTTGATTCATTTCG 58.199 33.333 0.00 0.00 0.00 3.46
4741 5245 6.748132 ACCTCATTTGTTTGATTCATTTCGT 58.252 32.000 0.00 0.00 0.00 3.85
4742 5246 7.881142 ACCTCATTTGTTTGATTCATTTCGTA 58.119 30.769 0.00 0.00 0.00 3.43
4743 5247 8.023128 ACCTCATTTGTTTGATTCATTTCGTAG 58.977 33.333 0.00 0.00 0.00 3.51
4744 5248 7.008628 CCTCATTTGTTTGATTCATTTCGTAGC 59.991 37.037 0.00 0.00 0.00 3.58
4745 5249 7.366513 TCATTTGTTTGATTCATTTCGTAGCA 58.633 30.769 0.00 0.00 0.00 3.49
4746 5250 7.864882 TCATTTGTTTGATTCATTTCGTAGCAA 59.135 29.630 0.00 0.00 0.00 3.91
4747 5251 8.649841 CATTTGTTTGATTCATTTCGTAGCAAT 58.350 29.630 0.00 0.00 0.00 3.56
4748 5252 7.795431 TTGTTTGATTCATTTCGTAGCAATC 57.205 32.000 0.00 0.00 0.00 2.67
4749 5253 6.321717 TGTTTGATTCATTTCGTAGCAATCC 58.678 36.000 0.00 0.00 0.00 3.01
4750 5254 6.072230 TGTTTGATTCATTTCGTAGCAATCCA 60.072 34.615 0.00 0.00 0.00 3.41
4751 5255 5.484173 TGATTCATTTCGTAGCAATCCAC 57.516 39.130 0.00 0.00 0.00 4.02
4752 5256 4.033932 TGATTCATTTCGTAGCAATCCACG 59.966 41.667 0.00 0.00 39.48 4.94
4753 5257 2.276201 TCATTTCGTAGCAATCCACGG 58.724 47.619 0.00 0.00 38.66 4.94
4754 5258 2.093921 TCATTTCGTAGCAATCCACGGA 60.094 45.455 0.00 0.00 38.66 4.69
4755 5259 1.717194 TTTCGTAGCAATCCACGGAC 58.283 50.000 0.00 0.00 38.66 4.79
4756 5260 0.604073 TTCGTAGCAATCCACGGACA 59.396 50.000 0.00 0.00 38.66 4.02
4757 5261 0.821517 TCGTAGCAATCCACGGACAT 59.178 50.000 0.00 0.00 38.66 3.06
4758 5262 1.206132 TCGTAGCAATCCACGGACATT 59.794 47.619 0.00 0.00 38.66 2.71
4759 5263 1.593006 CGTAGCAATCCACGGACATTC 59.407 52.381 0.00 0.00 34.57 2.67
4760 5264 2.738643 CGTAGCAATCCACGGACATTCT 60.739 50.000 0.00 0.00 34.57 2.40
4761 5265 3.490249 CGTAGCAATCCACGGACATTCTA 60.490 47.826 0.00 0.00 34.57 2.10
4762 5266 2.906354 AGCAATCCACGGACATTCTAC 58.094 47.619 0.00 0.00 0.00 2.59
4763 5267 2.501723 AGCAATCCACGGACATTCTACT 59.498 45.455 0.00 0.00 0.00 2.57
4764 5268 3.704566 AGCAATCCACGGACATTCTACTA 59.295 43.478 0.00 0.00 0.00 1.82
4765 5269 4.051922 GCAATCCACGGACATTCTACTAG 58.948 47.826 0.00 0.00 0.00 2.57
4766 5270 4.441634 GCAATCCACGGACATTCTACTAGT 60.442 45.833 0.00 0.00 0.00 2.57
4767 5271 4.920640 ATCCACGGACATTCTACTAGTG 57.079 45.455 5.39 0.00 0.00 2.74
4768 5272 2.426024 TCCACGGACATTCTACTAGTGC 59.574 50.000 5.39 0.00 0.00 4.40
4797 5301 5.127845 TGTTTTGGAGTTTGTCATTGGCTTA 59.872 36.000 0.00 0.00 0.00 3.09
4807 5311 7.611467 AGTTTGTCATTGGCTTAACATGATCTA 59.389 33.333 0.00 0.00 0.00 1.98
4824 5328 3.845781 TCTATTTCTGCCCCATCTCAC 57.154 47.619 0.00 0.00 0.00 3.51
4827 5331 0.329261 TTTCTGCCCCATCTCACCAG 59.671 55.000 0.00 0.00 0.00 4.00
4832 5336 0.257039 GCCCCATCTCACCAGACAAT 59.743 55.000 0.00 0.00 0.00 2.71
4835 5339 3.545703 CCCCATCTCACCAGACAATAAC 58.454 50.000 0.00 0.00 0.00 1.89
4840 5344 5.939883 CCATCTCACCAGACAATAACTGAAA 59.060 40.000 0.00 0.00 37.54 2.69
4845 5349 6.353323 TCACCAGACAATAACTGAAACTTCA 58.647 36.000 0.00 0.00 37.54 3.02
4846 5350 6.826231 TCACCAGACAATAACTGAAACTTCAA 59.174 34.615 0.00 0.00 36.64 2.69
4847 5351 7.338196 TCACCAGACAATAACTGAAACTTCAAA 59.662 33.333 0.00 0.00 36.64 2.69
4848 5352 7.432252 CACCAGACAATAACTGAAACTTCAAAC 59.568 37.037 0.00 0.00 36.64 2.93
4849 5353 6.918022 CCAGACAATAACTGAAACTTCAAACC 59.082 38.462 0.00 0.00 36.64 3.27
4850 5354 7.201821 CCAGACAATAACTGAAACTTCAAACCT 60.202 37.037 0.00 0.00 36.64 3.50
4851 5355 7.645340 CAGACAATAACTGAAACTTCAAACCTG 59.355 37.037 0.00 0.00 36.64 4.00
4852 5356 7.556275 AGACAATAACTGAAACTTCAAACCTGA 59.444 33.333 0.00 0.00 36.64 3.86
4853 5357 8.237811 ACAATAACTGAAACTTCAAACCTGAT 57.762 30.769 0.00 0.00 36.64 2.90
4854 5358 8.695456 ACAATAACTGAAACTTCAAACCTGATT 58.305 29.630 0.00 0.00 36.64 2.57
4855 5359 9.533253 CAATAACTGAAACTTCAAACCTGATTT 57.467 29.630 0.00 0.00 36.64 2.17
4856 5360 9.750125 AATAACTGAAACTTCAAACCTGATTTC 57.250 29.630 0.00 0.00 36.64 2.17
4857 5361 7.410120 AACTGAAACTTCAAACCTGATTTCT 57.590 32.000 0.00 0.00 34.06 2.52
4858 5362 8.519799 AACTGAAACTTCAAACCTGATTTCTA 57.480 30.769 0.00 0.00 34.06 2.10
4859 5363 7.931275 ACTGAAACTTCAAACCTGATTTCTAC 58.069 34.615 0.00 0.00 34.06 2.59
4860 5364 7.775561 ACTGAAACTTCAAACCTGATTTCTACT 59.224 33.333 0.00 0.00 34.06 2.57
4861 5365 9.273016 CTGAAACTTCAAACCTGATTTCTACTA 57.727 33.333 0.00 0.00 34.06 1.82
4862 5366 9.793259 TGAAACTTCAAACCTGATTTCTACTAT 57.207 29.630 0.00 0.00 34.06 2.12
4864 5368 9.793259 AAACTTCAAACCTGATTTCTACTATGA 57.207 29.630 0.00 0.00 0.00 2.15
4865 5369 9.442047 AACTTCAAACCTGATTTCTACTATGAG 57.558 33.333 0.00 0.00 0.00 2.90
4866 5370 8.598041 ACTTCAAACCTGATTTCTACTATGAGT 58.402 33.333 0.00 0.00 0.00 3.41
4867 5371 9.442047 CTTCAAACCTGATTTCTACTATGAGTT 57.558 33.333 0.00 0.00 0.00 3.01
4868 5372 9.436957 TTCAAACCTGATTTCTACTATGAGTTC 57.563 33.333 0.00 0.00 0.00 3.01
4869 5373 8.593679 TCAAACCTGATTTCTACTATGAGTTCA 58.406 33.333 0.00 0.00 0.00 3.18
4870 5374 9.219603 CAAACCTGATTTCTACTATGAGTTCAA 57.780 33.333 0.00 0.00 0.00 2.69
4871 5375 9.965902 AAACCTGATTTCTACTATGAGTTCAAT 57.034 29.630 0.00 0.00 0.00 2.57
4872 5376 9.965902 AACCTGATTTCTACTATGAGTTCAATT 57.034 29.630 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.721087 AAACTATGCTGCCTAGTGGTT 57.279 42.857 16.59 7.16 35.27 3.67
1 2 3.721087 AAAACTATGCTGCCTAGTGGT 57.279 42.857 16.59 6.96 35.27 4.16
2 3 6.509418 TTTTAAAACTATGCTGCCTAGTGG 57.491 37.500 16.59 0.00 30.00 4.00
3 4 6.806739 GGTTTTTAAAACTATGCTGCCTAGTG 59.193 38.462 18.31 0.00 30.00 2.74
4 5 6.349033 CGGTTTTTAAAACTATGCTGCCTAGT 60.349 38.462 18.31 11.19 0.00 2.57
5 6 6.027749 CGGTTTTTAAAACTATGCTGCCTAG 58.972 40.000 18.31 9.95 0.00 3.02
6 7 5.706369 TCGGTTTTTAAAACTATGCTGCCTA 59.294 36.000 18.31 0.00 0.00 3.93
7 8 4.521256 TCGGTTTTTAAAACTATGCTGCCT 59.479 37.500 18.31 0.00 0.00 4.75
8 9 4.800784 TCGGTTTTTAAAACTATGCTGCC 58.199 39.130 18.31 0.80 0.00 4.85
9 10 5.118050 GGTTCGGTTTTTAAAACTATGCTGC 59.882 40.000 18.31 0.00 0.00 5.25
10 11 5.341196 CGGTTCGGTTTTTAAAACTATGCTG 59.659 40.000 18.31 9.32 0.00 4.41
11 12 5.454520 CGGTTCGGTTTTTAAAACTATGCT 58.545 37.500 18.31 0.00 0.00 3.79
12 13 4.618067 CCGGTTCGGTTTTTAAAACTATGC 59.382 41.667 18.31 8.29 42.73 3.14
34 35 1.092348 GCCTTACCGGTTCATTCACC 58.908 55.000 15.04 0.00 34.25 4.02
35 36 1.092348 GGCCTTACCGGTTCATTCAC 58.908 55.000 15.04 0.00 34.25 3.18
36 37 0.988832 AGGCCTTACCGGTTCATTCA 59.011 50.000 15.04 0.00 46.52 2.57
37 38 2.014857 GAAGGCCTTACCGGTTCATTC 58.985 52.381 20.54 9.77 46.52 2.67
38 39 1.677820 CGAAGGCCTTACCGGTTCATT 60.678 52.381 20.54 3.75 46.52 2.57
39 40 0.107848 CGAAGGCCTTACCGGTTCAT 60.108 55.000 20.54 0.00 46.52 2.57
40 41 1.294138 CGAAGGCCTTACCGGTTCA 59.706 57.895 20.54 0.00 46.52 3.18
61 62 3.753842 CGGTCCGACATGTAAAAATTGG 58.246 45.455 4.91 0.00 0.00 3.16
64 65 1.741145 GGCGGTCCGACATGTAAAAAT 59.259 47.619 17.49 0.00 33.63 1.82
93 95 4.545610 TGTGAAAAATCAGCAATCGAACC 58.454 39.130 0.00 0.00 0.00 3.62
97 99 7.565450 TTGTATTGTGAAAAATCAGCAATCG 57.435 32.000 8.72 0.00 0.00 3.34
211 213 3.244700 GGCATGATAACCACCTCAGCTAT 60.245 47.826 0.00 0.00 0.00 2.97
217 219 1.678101 GCTTGGCATGATAACCACCTC 59.322 52.381 4.32 0.00 35.10 3.85
240 242 2.224159 AGGTCGTGGTCATTGGCCT 61.224 57.895 9.08 0.00 0.00 5.19
254 256 1.614711 TGGGATTCCATGCCAGGTC 59.385 57.895 4.80 0.00 46.53 3.85
261 263 3.003394 TGCAAGTAGTGGGATTCCATG 57.997 47.619 0.00 0.00 46.09 3.66
340 527 2.280592 AACAACGGACCGACCTGC 60.281 61.111 23.38 0.00 36.31 4.85
370 557 6.370166 TGAACATGAAAAACCAAAACCAGAAC 59.630 34.615 0.00 0.00 0.00 3.01
372 559 6.042638 TGAACATGAAAAACCAAAACCAGA 57.957 33.333 0.00 0.00 0.00 3.86
373 560 6.403092 GGTTGAACATGAAAAACCAAAACCAG 60.403 38.462 17.50 0.00 41.44 4.00
374 561 5.412904 GGTTGAACATGAAAAACCAAAACCA 59.587 36.000 17.50 0.00 41.44 3.67
376 563 5.446607 CCGGTTGAACATGAAAAACCAAAAC 60.447 40.000 20.31 5.45 41.81 2.43
377 564 4.631813 CCGGTTGAACATGAAAAACCAAAA 59.368 37.500 20.31 0.00 41.81 2.44
378 565 4.184629 CCGGTTGAACATGAAAAACCAAA 58.815 39.130 20.31 0.00 41.81 3.28
379 566 3.786635 CCGGTTGAACATGAAAAACCAA 58.213 40.909 20.31 5.88 41.81 3.67
380 567 2.482142 GCCGGTTGAACATGAAAAACCA 60.482 45.455 20.31 1.13 41.81 3.67
381 568 2.131972 GCCGGTTGAACATGAAAAACC 58.868 47.619 1.90 8.77 38.96 3.27
382 569 1.784283 CGCCGGTTGAACATGAAAAAC 59.216 47.619 1.90 0.01 0.00 2.43
405 592 4.064388 CCTAGTTTTAAAAACCGGACCGA 58.936 43.478 17.49 0.00 0.00 4.69
406 593 3.189080 CCCTAGTTTTAAAAACCGGACCG 59.811 47.826 9.46 6.99 0.00 4.79
423 610 4.845580 CACGCCTGCCTGCCCTAG 62.846 72.222 0.00 0.00 0.00 3.02
428 615 0.308993 GATAAATCACGCCTGCCTGC 59.691 55.000 0.00 0.00 0.00 4.85
429 616 0.947244 GGATAAATCACGCCTGCCTG 59.053 55.000 0.00 0.00 0.00 4.85
430 617 0.546122 TGGATAAATCACGCCTGCCT 59.454 50.000 0.00 0.00 0.00 4.75
431 618 0.663153 GTGGATAAATCACGCCTGCC 59.337 55.000 0.00 0.00 0.00 4.85
438 625 6.725246 CCTATTTTGACCGTGGATAAATCAC 58.275 40.000 0.00 0.00 0.00 3.06
513 955 5.768164 GGAGAGTTTTCCCTTGTTTCATGTA 59.232 40.000 0.00 0.00 0.00 2.29
531 973 3.920817 TGCCATTGGTGGGAGAGT 58.079 55.556 4.26 0.00 46.14 3.24
546 988 2.200337 AAGGGGCGTTTGTCCTTGC 61.200 57.895 0.00 0.00 40.80 4.01
582 1024 6.815641 TGATTAATTAAGGCGTACGGTTTGTA 59.184 34.615 18.39 0.00 0.00 2.41
687 1129 2.279741 GCATCTCTGGCGTTGAACATA 58.720 47.619 0.00 0.00 0.00 2.29
757 1199 1.448013 GCAGGCGTCCCTCTAACAC 60.448 63.158 0.00 0.00 40.33 3.32
759 1201 2.017559 ATCGCAGGCGTCCCTCTAAC 62.018 60.000 13.83 0.00 40.33 2.34
760 1202 1.327690 AATCGCAGGCGTCCCTCTAA 61.328 55.000 13.83 0.00 40.33 2.10
762 1204 1.739338 CTAATCGCAGGCGTCCCTCT 61.739 60.000 13.83 0.00 40.33 3.69
763 1205 1.300233 CTAATCGCAGGCGTCCCTC 60.300 63.158 13.83 0.00 40.33 4.30
764 1206 2.815308 CTAATCGCAGGCGTCCCT 59.185 61.111 13.83 0.00 44.25 4.20
765 1207 2.967615 GCTAATCGCAGGCGTCCC 60.968 66.667 13.83 0.00 40.74 4.46
766 1208 2.967615 GGCTAATCGCAGGCGTCC 60.968 66.667 13.83 5.02 41.67 4.79
796 1238 2.434336 CACAAGTAGTATAGGGGCAGCA 59.566 50.000 0.00 0.00 0.00 4.41
828 1270 6.782494 AGTTGTTTTTCCTGATTATTCTGGGT 59.218 34.615 9.79 0.00 40.44 4.51
940 1409 0.601046 GGTGCTTGCTTTTCTTGGGC 60.601 55.000 0.00 0.00 0.00 5.36
978 1447 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
1055 1533 2.028130 GAGATGAGGCCGAGAGAAAGA 58.972 52.381 0.00 0.00 0.00 2.52
1058 1536 1.103987 CCGAGATGAGGCCGAGAGAA 61.104 60.000 0.00 0.00 0.00 2.87
1292 1770 3.959975 GAGAGATCGAGCCGCGCT 61.960 66.667 5.56 0.47 43.88 5.92
1370 1848 0.532573 TGTTCATGGAGAGGTCGAGC 59.467 55.000 6.48 6.48 0.00 5.03
1504 1982 1.831580 AATCTGCACTTCTTGGAGCC 58.168 50.000 0.00 0.00 43.32 4.70
1598 2076 1.602605 TCCCGAGAGCACGTTCTCA 60.603 57.895 17.48 0.00 43.02 3.27
1682 2160 2.072487 GCTGGGTATGCTCCCCTCA 61.072 63.158 9.10 0.00 46.48 3.86
1997 2475 0.035881 CTTGCAGGTTCCTCAGCTCA 59.964 55.000 0.00 0.00 0.00 4.26
2082 2560 1.534595 GCTCAAGTCCAGTTTGCTCAG 59.465 52.381 0.00 0.00 0.00 3.35
2732 3210 1.518056 CTGCTTCGGCCTTCTTTGCA 61.518 55.000 0.00 1.87 40.91 4.08
3108 3586 0.319211 GCATTGTGCAGCAGCTGAAA 60.319 50.000 27.39 16.21 44.26 2.69
3384 3862 5.070847 AGTGCAATTTGGGAGAAAAGTTCAT 59.929 36.000 0.00 0.00 0.00 2.57
3443 3921 4.623932 TGTGTTATGCTATGGATCCTCC 57.376 45.455 14.23 0.00 36.96 4.30
3446 3924 5.922544 GCAATTTGTGTTATGCTATGGATCC 59.077 40.000 4.20 4.20 35.93 3.36
3447 3925 6.418819 GTGCAATTTGTGTTATGCTATGGATC 59.581 38.462 0.00 0.00 39.49 3.36
3450 3928 5.653507 AGTGCAATTTGTGTTATGCTATGG 58.346 37.500 0.00 0.00 39.49 2.74
3452 3930 6.923012 TCAAGTGCAATTTGTGTTATGCTAT 58.077 32.000 0.00 0.00 39.49 2.97
3453 3931 6.324561 TCAAGTGCAATTTGTGTTATGCTA 57.675 33.333 0.00 0.00 39.49 3.49
3455 3933 6.470557 AATCAAGTGCAATTTGTGTTATGC 57.529 33.333 0.00 0.00 34.82 3.14
3563 4052 1.002624 GTCCACCGGCATCTTGGAA 60.003 57.895 12.03 0.00 41.15 3.53
3713 4202 2.045926 ATGGCGACCTTGAGCACC 60.046 61.111 0.00 0.00 34.54 5.01
3728 4217 4.156622 CGCTCCGTGCACAGCATG 62.157 66.667 24.05 9.16 44.25 4.06
3958 4447 4.330250 CAGCTTGAGAGAAAAATCCTCCA 58.670 43.478 0.00 0.00 0.00 3.86
3962 4451 2.159462 CGGCAGCTTGAGAGAAAAATCC 60.159 50.000 0.00 0.00 0.00 3.01
4014 4511 2.286559 CGAAGCTATCCACGACGCG 61.287 63.158 3.53 3.53 0.00 6.01
4015 4512 0.930742 CTCGAAGCTATCCACGACGC 60.931 60.000 0.00 0.00 0.00 5.19
4055 4552 0.035317 TTCTCACGTTGCCATCAGCT 59.965 50.000 0.00 0.00 44.23 4.24
4141 4642 6.641169 TGTTTAAATAAGGTGCACATGTCA 57.359 33.333 20.43 0.75 0.00 3.58
4202 4705 4.358214 TGAAGGCCGTGGATATGGATATA 58.642 43.478 0.00 0.00 34.72 0.86
4215 4718 2.635915 TCCCGATTATTATGAAGGCCGT 59.364 45.455 0.00 0.00 0.00 5.68
4222 4725 3.780294 CCCCCTGATCCCGATTATTATGA 59.220 47.826 0.00 0.00 0.00 2.15
4236 4739 2.770048 CCCGCTCTTCCCCCTGAT 60.770 66.667 0.00 0.00 0.00 2.90
4243 4746 2.747855 CAACTGCCCCGCTCTTCC 60.748 66.667 0.00 0.00 0.00 3.46
4253 4756 4.021925 AGTCCTCCGCCAACTGCC 62.022 66.667 0.00 0.00 36.24 4.85
4255 4758 2.743928 GCAGTCCTCCGCCAACTG 60.744 66.667 0.00 0.00 42.59 3.16
4256 4759 2.925170 AGCAGTCCTCCGCCAACT 60.925 61.111 0.00 0.00 0.00 3.16
4279 4782 2.754465 TCGTACTTCCCCACATACCAT 58.246 47.619 0.00 0.00 0.00 3.55
4280 4783 2.234896 TCGTACTTCCCCACATACCA 57.765 50.000 0.00 0.00 0.00 3.25
4281 4784 2.433239 ACATCGTACTTCCCCACATACC 59.567 50.000 0.00 0.00 0.00 2.73
4282 4785 3.131577 TCACATCGTACTTCCCCACATAC 59.868 47.826 0.00 0.00 0.00 2.39
4284 4787 2.184533 TCACATCGTACTTCCCCACAT 58.815 47.619 0.00 0.00 0.00 3.21
4299 4802 0.693049 ACGCCCTCTTTCCTTCACAT 59.307 50.000 0.00 0.00 0.00 3.21
4331 4834 2.402305 GATGACGTCCAGCTCATCATC 58.598 52.381 14.12 2.69 41.67 2.92
4336 4839 2.710902 CCCGATGACGTCCAGCTCA 61.711 63.158 14.12 0.00 37.88 4.26
4338 4841 1.827399 AAACCCGATGACGTCCAGCT 61.827 55.000 14.12 0.00 37.88 4.24
4340 4843 2.373540 TAAAACCCGATGACGTCCAG 57.626 50.000 14.12 4.04 37.88 3.86
4341 4844 2.835580 TTAAAACCCGATGACGTCCA 57.164 45.000 14.12 1.26 37.88 4.02
4342 4845 3.499537 AGTTTTAAAACCCGATGACGTCC 59.500 43.478 24.06 0.00 39.71 4.79
4344 4847 5.933463 TGATAGTTTTAAAACCCGATGACGT 59.067 36.000 24.06 7.92 39.71 4.34
4345 4848 6.311935 TCTGATAGTTTTAAAACCCGATGACG 59.688 38.462 24.06 8.53 39.71 4.35
4346 4849 7.201617 CCTCTGATAGTTTTAAAACCCGATGAC 60.202 40.741 24.06 11.40 39.71 3.06
4352 4855 5.262009 AGCCCTCTGATAGTTTTAAAACCC 58.738 41.667 24.06 15.31 39.71 4.11
4363 4866 5.373812 TTTTCCCTAAAGCCCTCTGATAG 57.626 43.478 0.00 0.00 0.00 2.08
4376 4879 4.344679 CCATAGCATGGCATTTTTCCCTAA 59.655 41.667 0.00 0.00 44.70 2.69
4377 4880 3.896888 CCATAGCATGGCATTTTTCCCTA 59.103 43.478 0.00 0.00 44.70 3.53
4378 4881 2.701951 CCATAGCATGGCATTTTTCCCT 59.298 45.455 0.00 0.00 44.70 4.20
4379 4882 3.116079 CCATAGCATGGCATTTTTCCC 57.884 47.619 0.00 0.00 44.70 3.97
4411 4914 1.918800 CAGAACCTCCCCTTCCCGT 60.919 63.158 0.00 0.00 0.00 5.28
4419 4922 0.112412 TTTTCCAGCCAGAACCTCCC 59.888 55.000 0.00 0.00 0.00 4.30
4421 4924 2.568623 TCTTTTCCAGCCAGAACCTC 57.431 50.000 0.00 0.00 0.00 3.85
4425 4928 2.965147 CCCTTTTCTTTTCCAGCCAGAA 59.035 45.455 0.00 0.00 0.00 3.02
4428 4931 2.038659 CACCCTTTTCTTTTCCAGCCA 58.961 47.619 0.00 0.00 0.00 4.75
4435 4939 2.168313 CCACAGTGCACCCTTTTCTTTT 59.832 45.455 14.63 0.00 0.00 2.27
4446 4950 3.731766 AACCCACCCCACAGTGCAC 62.732 63.158 9.40 9.40 36.38 4.57
4465 4969 1.532007 GTAACATGCGGACGGACAAAA 59.468 47.619 0.00 0.00 0.00 2.44
4469 4973 2.212869 TATGTAACATGCGGACGGAC 57.787 50.000 0.00 0.00 0.00 4.79
4470 4974 4.278919 TCTTATATGTAACATGCGGACGGA 59.721 41.667 0.00 0.00 0.00 4.69
4471 4975 4.552355 TCTTATATGTAACATGCGGACGG 58.448 43.478 0.00 0.00 0.00 4.79
4472 4976 5.062183 CCATCTTATATGTAACATGCGGACG 59.938 44.000 0.00 0.00 0.00 4.79
4473 4977 5.163854 GCCATCTTATATGTAACATGCGGAC 60.164 44.000 0.00 0.00 0.00 4.79
4474 4978 4.935205 GCCATCTTATATGTAACATGCGGA 59.065 41.667 0.00 0.00 0.00 5.54
4475 4979 4.201714 CGCCATCTTATATGTAACATGCGG 60.202 45.833 0.00 0.00 0.00 5.69
4476 4980 4.201714 CCGCCATCTTATATGTAACATGCG 60.202 45.833 0.00 0.00 0.00 4.73
4477 4981 4.935205 TCCGCCATCTTATATGTAACATGC 59.065 41.667 0.00 0.00 0.00 4.06
4478 4982 7.981789 ACTATCCGCCATCTTATATGTAACATG 59.018 37.037 0.00 0.00 0.00 3.21
4479 4983 8.079211 ACTATCCGCCATCTTATATGTAACAT 57.921 34.615 0.00 0.00 0.00 2.71
4480 4984 7.396339 AGACTATCCGCCATCTTATATGTAACA 59.604 37.037 0.00 0.00 0.00 2.41
4481 4985 7.702772 CAGACTATCCGCCATCTTATATGTAAC 59.297 40.741 0.00 0.00 0.00 2.50
4482 4986 7.614192 TCAGACTATCCGCCATCTTATATGTAA 59.386 37.037 0.00 0.00 0.00 2.41
4483 4987 7.116736 TCAGACTATCCGCCATCTTATATGTA 58.883 38.462 0.00 0.00 0.00 2.29
4484 4988 5.952347 TCAGACTATCCGCCATCTTATATGT 59.048 40.000 0.00 0.00 0.00 2.29
4485 4989 6.456795 TCAGACTATCCGCCATCTTATATG 57.543 41.667 0.00 0.00 0.00 1.78
4486 4990 7.667575 ATTCAGACTATCCGCCATCTTATAT 57.332 36.000 0.00 0.00 0.00 0.86
4487 4991 8.589701 TTATTCAGACTATCCGCCATCTTATA 57.410 34.615 0.00 0.00 0.00 0.98
4488 4992 7.482169 TTATTCAGACTATCCGCCATCTTAT 57.518 36.000 0.00 0.00 0.00 1.73
4489 4993 6.911250 TTATTCAGACTATCCGCCATCTTA 57.089 37.500 0.00 0.00 0.00 2.10
4490 4994 5.808366 TTATTCAGACTATCCGCCATCTT 57.192 39.130 0.00 0.00 0.00 2.40
4491 4995 5.481824 TGATTATTCAGACTATCCGCCATCT 59.518 40.000 0.00 0.00 0.00 2.90
4492 4996 5.724328 TGATTATTCAGACTATCCGCCATC 58.276 41.667 0.00 0.00 0.00 3.51
4493 4997 5.745312 TGATTATTCAGACTATCCGCCAT 57.255 39.130 0.00 0.00 0.00 4.40
4494 4998 5.745312 ATGATTATTCAGACTATCCGCCA 57.255 39.130 0.00 0.00 34.73 5.69
4495 4999 8.723942 AAATATGATTATTCAGACTATCCGCC 57.276 34.615 0.00 0.00 34.73 6.13
4517 5021 9.430399 AATCCATTCCATATGTGAGAGAAAAAT 57.570 29.630 1.24 0.00 0.00 1.82
4518 5022 8.827832 AATCCATTCCATATGTGAGAGAAAAA 57.172 30.769 1.24 0.00 0.00 1.94
4519 5023 8.827832 AAATCCATTCCATATGTGAGAGAAAA 57.172 30.769 1.24 0.00 0.00 2.29
4528 5032 9.193806 GCCATCTTATAAATCCATTCCATATGT 57.806 33.333 1.24 0.00 0.00 2.29
4529 5033 8.347771 CGCCATCTTATAAATCCATTCCATATG 58.652 37.037 0.00 0.00 0.00 1.78
4530 5034 7.503566 CCGCCATCTTATAAATCCATTCCATAT 59.496 37.037 0.00 0.00 0.00 1.78
4531 5035 6.828273 CCGCCATCTTATAAATCCATTCCATA 59.172 38.462 0.00 0.00 0.00 2.74
4532 5036 5.653769 CCGCCATCTTATAAATCCATTCCAT 59.346 40.000 0.00 0.00 0.00 3.41
4533 5037 5.009631 CCGCCATCTTATAAATCCATTCCA 58.990 41.667 0.00 0.00 0.00 3.53
4534 5038 5.253330 TCCGCCATCTTATAAATCCATTCC 58.747 41.667 0.00 0.00 0.00 3.01
4535 5039 7.770897 ACTATCCGCCATCTTATAAATCCATTC 59.229 37.037 0.00 0.00 0.00 2.67
4536 5040 7.633789 ACTATCCGCCATCTTATAAATCCATT 58.366 34.615 0.00 0.00 0.00 3.16
4537 5041 7.126421 AGACTATCCGCCATCTTATAAATCCAT 59.874 37.037 0.00 0.00 0.00 3.41
4538 5042 6.440647 AGACTATCCGCCATCTTATAAATCCA 59.559 38.462 0.00 0.00 0.00 3.41
4539 5043 6.758886 CAGACTATCCGCCATCTTATAAATCC 59.241 42.308 0.00 0.00 0.00 3.01
4540 5044 7.548097 TCAGACTATCCGCCATCTTATAAATC 58.452 38.462 0.00 0.00 0.00 2.17
4541 5045 7.482169 TCAGACTATCCGCCATCTTATAAAT 57.518 36.000 0.00 0.00 0.00 1.40
4542 5046 6.911250 TCAGACTATCCGCCATCTTATAAA 57.089 37.500 0.00 0.00 0.00 1.40
4543 5047 6.266786 TGTTCAGACTATCCGCCATCTTATAA 59.733 38.462 0.00 0.00 0.00 0.98
4544 5048 5.773176 TGTTCAGACTATCCGCCATCTTATA 59.227 40.000 0.00 0.00 0.00 0.98
4545 5049 4.588951 TGTTCAGACTATCCGCCATCTTAT 59.411 41.667 0.00 0.00 0.00 1.73
4546 5050 3.958147 TGTTCAGACTATCCGCCATCTTA 59.042 43.478 0.00 0.00 0.00 2.10
4547 5051 2.766263 TGTTCAGACTATCCGCCATCTT 59.234 45.455 0.00 0.00 0.00 2.40
4548 5052 2.388735 TGTTCAGACTATCCGCCATCT 58.611 47.619 0.00 0.00 0.00 2.90
4549 5053 2.890808 TGTTCAGACTATCCGCCATC 57.109 50.000 0.00 0.00 0.00 3.51
4550 5054 3.134623 TGATTGTTCAGACTATCCGCCAT 59.865 43.478 0.00 0.00 37.26 4.40
4551 5055 2.499693 TGATTGTTCAGACTATCCGCCA 59.500 45.455 0.00 0.00 37.26 5.69
4552 5056 3.179443 TGATTGTTCAGACTATCCGCC 57.821 47.619 0.00 0.00 37.26 6.13
4553 5057 7.386299 AGAAATATGATTGTTCAGACTATCCGC 59.614 37.037 0.00 0.00 37.26 5.54
4554 5058 8.824159 AGAAATATGATTGTTCAGACTATCCG 57.176 34.615 0.00 0.00 37.26 4.18
4558 5062 9.823647 GAGGAAGAAATATGATTGTTCAGACTA 57.176 33.333 5.11 0.00 35.05 2.59
4559 5063 8.324306 TGAGGAAGAAATATGATTGTTCAGACT 58.676 33.333 5.11 0.00 35.05 3.24
4560 5064 8.394121 GTGAGGAAGAAATATGATTGTTCAGAC 58.606 37.037 5.11 0.00 35.05 3.51
4561 5065 8.102676 TGTGAGGAAGAAATATGATTGTTCAGA 58.897 33.333 5.11 0.00 35.05 3.27
4562 5066 8.272545 TGTGAGGAAGAAATATGATTGTTCAG 57.727 34.615 5.11 0.00 35.05 3.02
4563 5067 8.812513 ATGTGAGGAAGAAATATGATTGTTCA 57.187 30.769 5.11 0.00 35.05 3.18
4566 5070 9.293404 CCATATGTGAGGAAGAAATATGATTGT 57.707 33.333 1.24 0.00 34.54 2.71
4567 5071 8.737175 CCCATATGTGAGGAAGAAATATGATTG 58.263 37.037 1.24 0.00 34.54 2.67
4568 5072 8.672329 TCCCATATGTGAGGAAGAAATATGATT 58.328 33.333 1.24 0.00 34.54 2.57
4569 5073 8.223378 TCCCATATGTGAGGAAGAAATATGAT 57.777 34.615 1.24 0.00 34.54 2.45
4570 5074 7.631510 TCCCATATGTGAGGAAGAAATATGA 57.368 36.000 1.24 0.00 34.54 2.15
4571 5075 7.338703 CCATCCCATATGTGAGGAAGAAATATG 59.661 40.741 1.17 0.00 33.11 1.78
4572 5076 7.240405 TCCATCCCATATGTGAGGAAGAAATAT 59.760 37.037 1.17 0.00 31.37 1.28
4573 5077 6.562223 TCCATCCCATATGTGAGGAAGAAATA 59.438 38.462 1.17 0.00 31.37 1.40
4574 5078 5.373555 TCCATCCCATATGTGAGGAAGAAAT 59.626 40.000 1.17 0.00 31.37 2.17
4575 5079 4.726317 TCCATCCCATATGTGAGGAAGAAA 59.274 41.667 1.17 0.00 31.37 2.52
4576 5080 4.306391 TCCATCCCATATGTGAGGAAGAA 58.694 43.478 1.17 0.00 31.37 2.52
4577 5081 3.940335 TCCATCCCATATGTGAGGAAGA 58.060 45.455 1.17 1.09 31.37 2.87
4578 5082 4.923516 ATCCATCCCATATGTGAGGAAG 57.076 45.455 1.17 0.00 31.37 3.46
4579 5083 5.387788 CAAATCCATCCCATATGTGAGGAA 58.612 41.667 1.17 0.00 31.37 3.36
4580 5084 4.202599 CCAAATCCATCCCATATGTGAGGA 60.203 45.833 1.17 5.37 31.89 3.71
4581 5085 4.084287 CCAAATCCATCCCATATGTGAGG 58.916 47.826 1.24 0.00 0.00 3.86
4582 5086 4.084287 CCCAAATCCATCCCATATGTGAG 58.916 47.826 1.24 0.00 0.00 3.51
4583 5087 3.181419 CCCCAAATCCATCCCATATGTGA 60.181 47.826 1.24 0.00 0.00 3.58
4584 5088 3.167485 CCCCAAATCCATCCCATATGTG 58.833 50.000 1.24 0.00 0.00 3.21
4585 5089 2.112331 CCCCCAAATCCATCCCATATGT 59.888 50.000 1.24 0.00 0.00 2.29
4586 5090 2.382993 TCCCCCAAATCCATCCCATATG 59.617 50.000 0.00 0.00 0.00 1.78
4587 5091 2.656432 CTCCCCCAAATCCATCCCATAT 59.344 50.000 0.00 0.00 0.00 1.78
4588 5092 2.072973 CTCCCCCAAATCCATCCCATA 58.927 52.381 0.00 0.00 0.00 2.74
4589 5093 0.862554 CTCCCCCAAATCCATCCCAT 59.137 55.000 0.00 0.00 0.00 4.00
4590 5094 0.554865 ACTCCCCCAAATCCATCCCA 60.555 55.000 0.00 0.00 0.00 4.37
4591 5095 0.186143 GACTCCCCCAAATCCATCCC 59.814 60.000 0.00 0.00 0.00 3.85
4592 5096 1.133668 CAGACTCCCCCAAATCCATCC 60.134 57.143 0.00 0.00 0.00 3.51
4593 5097 1.846439 TCAGACTCCCCCAAATCCATC 59.154 52.381 0.00 0.00 0.00 3.51
4594 5098 1.985622 TCAGACTCCCCCAAATCCAT 58.014 50.000 0.00 0.00 0.00 3.41
4595 5099 1.354368 GTTCAGACTCCCCCAAATCCA 59.646 52.381 0.00 0.00 0.00 3.41
4596 5100 1.636003 AGTTCAGACTCCCCCAAATCC 59.364 52.381 0.00 0.00 0.00 3.01
4597 5101 4.779993 ATAGTTCAGACTCCCCCAAATC 57.220 45.455 0.00 0.00 37.33 2.17
4598 5102 5.036916 TGTATAGTTCAGACTCCCCCAAAT 58.963 41.667 0.00 0.00 37.33 2.32
4599 5103 4.224370 GTGTATAGTTCAGACTCCCCCAAA 59.776 45.833 0.00 0.00 37.33 3.28
4600 5104 3.773119 GTGTATAGTTCAGACTCCCCCAA 59.227 47.826 0.00 0.00 37.33 4.12
4601 5105 3.245839 TGTGTATAGTTCAGACTCCCCCA 60.246 47.826 0.00 0.00 37.33 4.96
4602 5106 3.371965 TGTGTATAGTTCAGACTCCCCC 58.628 50.000 0.00 0.00 37.33 5.40
4603 5107 4.202264 CCATGTGTATAGTTCAGACTCCCC 60.202 50.000 0.00 0.00 37.33 4.81
4604 5108 4.406003 ACCATGTGTATAGTTCAGACTCCC 59.594 45.833 0.00 0.00 37.33 4.30
4605 5109 5.599999 ACCATGTGTATAGTTCAGACTCC 57.400 43.478 0.00 0.00 37.33 3.85
4606 5110 5.812642 CCAACCATGTGTATAGTTCAGACTC 59.187 44.000 0.00 0.00 37.33 3.36
4607 5111 5.483937 TCCAACCATGTGTATAGTTCAGACT 59.516 40.000 0.00 0.00 39.97 3.24
4608 5112 5.581085 GTCCAACCATGTGTATAGTTCAGAC 59.419 44.000 0.00 0.00 0.00 3.51
4609 5113 5.483937 AGTCCAACCATGTGTATAGTTCAGA 59.516 40.000 0.00 0.00 0.00 3.27
4610 5114 5.582269 CAGTCCAACCATGTGTATAGTTCAG 59.418 44.000 0.00 0.00 0.00 3.02
4611 5115 5.012664 ACAGTCCAACCATGTGTATAGTTCA 59.987 40.000 0.00 0.00 0.00 3.18
4612 5116 5.351465 CACAGTCCAACCATGTGTATAGTTC 59.649 44.000 0.00 0.00 39.54 3.01
4613 5117 5.245531 CACAGTCCAACCATGTGTATAGTT 58.754 41.667 0.00 0.00 39.54 2.24
4614 5118 4.323485 CCACAGTCCAACCATGTGTATAGT 60.323 45.833 4.10 0.00 42.17 2.12
4615 5119 4.081142 TCCACAGTCCAACCATGTGTATAG 60.081 45.833 4.10 0.00 42.17 1.31
4616 5120 3.841255 TCCACAGTCCAACCATGTGTATA 59.159 43.478 4.10 0.00 42.17 1.47
4617 5121 2.642311 TCCACAGTCCAACCATGTGTAT 59.358 45.455 4.10 0.00 42.17 2.29
4618 5122 2.038426 CTCCACAGTCCAACCATGTGTA 59.962 50.000 4.10 0.00 42.17 2.90
4619 5123 0.843309 TCCACAGTCCAACCATGTGT 59.157 50.000 4.10 0.00 42.17 3.72
4620 5124 1.072173 TCTCCACAGTCCAACCATGTG 59.928 52.381 0.00 0.00 43.11 3.21
4621 5125 1.349026 CTCTCCACAGTCCAACCATGT 59.651 52.381 0.00 0.00 0.00 3.21
4622 5126 1.947678 GCTCTCCACAGTCCAACCATG 60.948 57.143 0.00 0.00 0.00 3.66
4623 5127 0.326264 GCTCTCCACAGTCCAACCAT 59.674 55.000 0.00 0.00 0.00 3.55
4624 5128 0.764369 AGCTCTCCACAGTCCAACCA 60.764 55.000 0.00 0.00 0.00 3.67
4625 5129 0.398318 AAGCTCTCCACAGTCCAACC 59.602 55.000 0.00 0.00 0.00 3.77
4626 5130 1.202698 ACAAGCTCTCCACAGTCCAAC 60.203 52.381 0.00 0.00 0.00 3.77
4627 5131 1.070758 GACAAGCTCTCCACAGTCCAA 59.929 52.381 0.00 0.00 0.00 3.53
4628 5132 0.681733 GACAAGCTCTCCACAGTCCA 59.318 55.000 0.00 0.00 0.00 4.02
4629 5133 0.972883 AGACAAGCTCTCCACAGTCC 59.027 55.000 0.00 0.00 0.00 3.85
4630 5134 1.615883 TCAGACAAGCTCTCCACAGTC 59.384 52.381 0.00 0.00 0.00 3.51
4631 5135 1.342819 GTCAGACAAGCTCTCCACAGT 59.657 52.381 0.00 0.00 0.00 3.55
4632 5136 1.668337 CGTCAGACAAGCTCTCCACAG 60.668 57.143 0.41 0.00 0.00 3.66
4633 5137 0.315251 CGTCAGACAAGCTCTCCACA 59.685 55.000 0.41 0.00 0.00 4.17
4634 5138 1.011451 GCGTCAGACAAGCTCTCCAC 61.011 60.000 0.41 0.00 0.00 4.02
4635 5139 1.290324 GCGTCAGACAAGCTCTCCA 59.710 57.895 0.41 0.00 0.00 3.86
4636 5140 1.446966 GGCGTCAGACAAGCTCTCC 60.447 63.158 0.41 0.00 0.00 3.71
4637 5141 0.735632 CAGGCGTCAGACAAGCTCTC 60.736 60.000 0.41 0.00 0.00 3.20
4638 5142 1.291588 CAGGCGTCAGACAAGCTCT 59.708 57.895 0.41 0.00 0.00 4.09
4639 5143 0.601311 AACAGGCGTCAGACAAGCTC 60.601 55.000 0.41 0.00 0.00 4.09
4640 5144 0.179045 AAACAGGCGTCAGACAAGCT 60.179 50.000 0.41 0.00 0.00 3.74
4641 5145 0.040958 CAAACAGGCGTCAGACAAGC 60.041 55.000 0.41 0.00 0.00 4.01
4642 5146 1.581934 TCAAACAGGCGTCAGACAAG 58.418 50.000 0.41 0.00 0.00 3.16
4643 5147 1.872952 CATCAAACAGGCGTCAGACAA 59.127 47.619 0.41 0.00 0.00 3.18
4644 5148 1.202639 ACATCAAACAGGCGTCAGACA 60.203 47.619 0.41 0.00 0.00 3.41
4645 5149 1.461127 GACATCAAACAGGCGTCAGAC 59.539 52.381 0.00 0.00 0.00 3.51
4646 5150 1.608025 GGACATCAAACAGGCGTCAGA 60.608 52.381 0.00 0.00 0.00 3.27
4647 5151 0.798776 GGACATCAAACAGGCGTCAG 59.201 55.000 0.00 0.00 0.00 3.51
4648 5152 0.107643 TGGACATCAAACAGGCGTCA 59.892 50.000 0.00 0.00 0.00 4.35
4649 5153 1.453155 ATGGACATCAAACAGGCGTC 58.547 50.000 0.00 0.00 0.00 5.19
4650 5154 2.290008 TGTATGGACATCAAACAGGCGT 60.290 45.455 0.00 0.00 0.00 5.68
4651 5155 2.355197 TGTATGGACATCAAACAGGCG 58.645 47.619 0.00 0.00 0.00 5.52
4652 5156 3.489738 GCATGTATGGACATCAAACAGGC 60.490 47.826 7.34 7.34 44.82 4.85
4653 5157 3.067180 GGCATGTATGGACATCAAACAGG 59.933 47.826 0.00 0.00 44.82 4.00
4654 5158 3.695556 TGGCATGTATGGACATCAAACAG 59.304 43.478 0.00 0.00 44.82 3.16
4655 5159 3.694926 TGGCATGTATGGACATCAAACA 58.305 40.909 0.00 0.00 44.82 2.83
4656 5160 4.398988 TCTTGGCATGTATGGACATCAAAC 59.601 41.667 0.00 0.00 44.82 2.93
4657 5161 4.398988 GTCTTGGCATGTATGGACATCAAA 59.601 41.667 0.00 0.00 44.82 2.69
4658 5162 3.947196 GTCTTGGCATGTATGGACATCAA 59.053 43.478 0.00 0.00 44.82 2.57
4659 5163 3.544684 GTCTTGGCATGTATGGACATCA 58.455 45.455 0.00 0.00 44.82 3.07
4660 5164 2.545526 CGTCTTGGCATGTATGGACATC 59.454 50.000 0.00 0.00 44.82 3.06
4662 5166 1.277842 ACGTCTTGGCATGTATGGACA 59.722 47.619 0.00 0.00 40.72 4.02
4663 5167 2.024176 ACGTCTTGGCATGTATGGAC 57.976 50.000 0.00 0.00 0.00 4.02
4664 5168 3.727726 CATACGTCTTGGCATGTATGGA 58.272 45.455 15.89 2.38 40.46 3.41
4665 5169 2.224079 GCATACGTCTTGGCATGTATGG 59.776 50.000 20.98 10.41 42.79 2.74
4666 5170 2.096762 CGCATACGTCTTGGCATGTATG 60.097 50.000 17.89 17.89 44.32 2.39
4667 5171 2.135139 CGCATACGTCTTGGCATGTAT 58.865 47.619 0.00 0.00 33.53 2.29
4668 5172 1.566404 CGCATACGTCTTGGCATGTA 58.434 50.000 0.00 0.00 33.53 2.29
4669 5173 1.089481 CCGCATACGTCTTGGCATGT 61.089 55.000 0.00 0.00 37.70 3.21
4670 5174 1.643292 CCGCATACGTCTTGGCATG 59.357 57.895 0.00 0.00 37.70 4.06
4671 5175 1.523711 CCCGCATACGTCTTGGCAT 60.524 57.895 0.00 0.00 37.70 4.40
4672 5176 2.125310 CCCGCATACGTCTTGGCA 60.125 61.111 0.00 0.00 37.70 4.92
4673 5177 1.022451 TTTCCCGCATACGTCTTGGC 61.022 55.000 0.00 0.00 37.70 4.52
4674 5178 1.444836 TTTTCCCGCATACGTCTTGG 58.555 50.000 0.00 0.00 37.70 3.61
4675 5179 3.126171 TCATTTTTCCCGCATACGTCTTG 59.874 43.478 0.00 0.00 37.70 3.02
4676 5180 3.340034 TCATTTTTCCCGCATACGTCTT 58.660 40.909 0.00 0.00 37.70 3.01
4677 5181 2.980568 TCATTTTTCCCGCATACGTCT 58.019 42.857 0.00 0.00 37.70 4.18
4678 5182 3.126343 AGTTCATTTTTCCCGCATACGTC 59.874 43.478 0.00 0.00 37.70 4.34
4679 5183 3.078837 AGTTCATTTTTCCCGCATACGT 58.921 40.909 0.00 0.00 37.70 3.57
4680 5184 3.757745 AGTTCATTTTTCCCGCATACG 57.242 42.857 0.00 0.00 39.67 3.06
4681 5185 5.344933 GTCAAAGTTCATTTTTCCCGCATAC 59.655 40.000 0.00 0.00 0.00 2.39
4682 5186 5.242838 AGTCAAAGTTCATTTTTCCCGCATA 59.757 36.000 0.00 0.00 0.00 3.14
4683 5187 4.039124 AGTCAAAGTTCATTTTTCCCGCAT 59.961 37.500 0.00 0.00 0.00 4.73
4684 5188 3.383185 AGTCAAAGTTCATTTTTCCCGCA 59.617 39.130 0.00 0.00 0.00 5.69
4685 5189 3.977427 AGTCAAAGTTCATTTTTCCCGC 58.023 40.909 0.00 0.00 0.00 6.13
4686 5190 5.234116 CCAAAGTCAAAGTTCATTTTTCCCG 59.766 40.000 0.00 0.00 0.00 5.14
4687 5191 6.037062 CACCAAAGTCAAAGTTCATTTTTCCC 59.963 38.462 0.00 0.00 0.00 3.97
4688 5192 6.816140 TCACCAAAGTCAAAGTTCATTTTTCC 59.184 34.615 0.00 0.00 0.00 3.13
4689 5193 7.330700 TGTCACCAAAGTCAAAGTTCATTTTTC 59.669 33.333 0.00 0.00 0.00 2.29
4690 5194 7.158021 TGTCACCAAAGTCAAAGTTCATTTTT 58.842 30.769 0.00 0.00 0.00 1.94
4691 5195 6.696411 TGTCACCAAAGTCAAAGTTCATTTT 58.304 32.000 0.00 0.00 0.00 1.82
4692 5196 6.279513 TGTCACCAAAGTCAAAGTTCATTT 57.720 33.333 0.00 0.00 0.00 2.32
4693 5197 5.913137 TGTCACCAAAGTCAAAGTTCATT 57.087 34.783 0.00 0.00 0.00 2.57
4694 5198 6.970484 GTATGTCACCAAAGTCAAAGTTCAT 58.030 36.000 0.00 0.00 0.00 2.57
4695 5199 6.371809 GTATGTCACCAAAGTCAAAGTTCA 57.628 37.500 0.00 0.00 0.00 3.18
4710 5214 7.592938 TGAATCAAACAAATGAGGTATGTCAC 58.407 34.615 0.00 0.00 31.76 3.67
4711 5215 7.757941 TGAATCAAACAAATGAGGTATGTCA 57.242 32.000 0.00 0.00 31.76 3.58
4712 5216 9.643693 AAATGAATCAAACAAATGAGGTATGTC 57.356 29.630 0.00 0.00 31.76 3.06
4713 5217 9.643693 GAAATGAATCAAACAAATGAGGTATGT 57.356 29.630 0.00 0.00 31.76 2.29
4714 5218 8.800972 CGAAATGAATCAAACAAATGAGGTATG 58.199 33.333 0.00 0.00 31.76 2.39
4715 5219 8.522830 ACGAAATGAATCAAACAAATGAGGTAT 58.477 29.630 0.00 0.00 31.76 2.73
4716 5220 7.881142 ACGAAATGAATCAAACAAATGAGGTA 58.119 30.769 0.00 0.00 31.76 3.08
4717 5221 6.748132 ACGAAATGAATCAAACAAATGAGGT 58.252 32.000 0.00 0.00 31.76 3.85
4718 5222 7.008628 GCTACGAAATGAATCAAACAAATGAGG 59.991 37.037 0.00 0.00 31.76 3.86
4719 5223 7.538334 TGCTACGAAATGAATCAAACAAATGAG 59.462 33.333 0.00 0.00 31.76 2.90
4720 5224 7.366513 TGCTACGAAATGAATCAAACAAATGA 58.633 30.769 0.00 0.00 0.00 2.57
4721 5225 7.565450 TGCTACGAAATGAATCAAACAAATG 57.435 32.000 0.00 0.00 0.00 2.32
4722 5226 8.761575 ATTGCTACGAAATGAATCAAACAAAT 57.238 26.923 0.00 0.00 0.00 2.32
4723 5227 7.328249 GGATTGCTACGAAATGAATCAAACAAA 59.672 33.333 0.00 0.00 0.00 2.83
4724 5228 6.806249 GGATTGCTACGAAATGAATCAAACAA 59.194 34.615 0.00 0.00 0.00 2.83
4725 5229 6.072230 TGGATTGCTACGAAATGAATCAAACA 60.072 34.615 0.00 0.00 0.00 2.83
4726 5230 6.251376 GTGGATTGCTACGAAATGAATCAAAC 59.749 38.462 0.00 0.00 0.00 2.93
4727 5231 6.321717 GTGGATTGCTACGAAATGAATCAAA 58.678 36.000 0.00 0.00 0.00 2.69
4728 5232 5.879237 GTGGATTGCTACGAAATGAATCAA 58.121 37.500 0.00 0.00 0.00 2.57
4729 5233 5.484173 GTGGATTGCTACGAAATGAATCA 57.516 39.130 0.00 0.00 0.00 2.57
4739 5243 1.593006 GAATGTCCGTGGATTGCTACG 59.407 52.381 0.00 0.00 46.90 3.51
4740 5244 2.906354 AGAATGTCCGTGGATTGCTAC 58.094 47.619 0.00 0.00 0.00 3.58
4741 5245 3.704566 AGTAGAATGTCCGTGGATTGCTA 59.295 43.478 0.00 0.00 0.00 3.49
4742 5246 2.501723 AGTAGAATGTCCGTGGATTGCT 59.498 45.455 0.00 0.00 0.00 3.91
4743 5247 2.906354 AGTAGAATGTCCGTGGATTGC 58.094 47.619 0.00 0.00 0.00 3.56
4744 5248 5.043903 CACTAGTAGAATGTCCGTGGATTG 58.956 45.833 3.59 0.00 0.00 2.67
4745 5249 4.441634 GCACTAGTAGAATGTCCGTGGATT 60.442 45.833 3.59 0.00 0.00 3.01
4746 5250 3.068307 GCACTAGTAGAATGTCCGTGGAT 59.932 47.826 3.59 0.00 0.00 3.41
4747 5251 2.426024 GCACTAGTAGAATGTCCGTGGA 59.574 50.000 3.59 0.00 0.00 4.02
4748 5252 2.794981 CGCACTAGTAGAATGTCCGTGG 60.795 54.545 3.59 0.00 0.00 4.94
4749 5253 2.159421 ACGCACTAGTAGAATGTCCGTG 60.159 50.000 3.59 0.00 0.00 4.94
4750 5254 2.089980 ACGCACTAGTAGAATGTCCGT 58.910 47.619 3.59 0.71 0.00 4.69
4751 5255 2.846039 ACGCACTAGTAGAATGTCCG 57.154 50.000 3.59 0.13 0.00 4.79
4752 5256 5.589192 ACATTACGCACTAGTAGAATGTCC 58.411 41.667 3.59 0.00 27.72 4.02
4753 5257 7.521509 AAACATTACGCACTAGTAGAATGTC 57.478 36.000 17.36 0.00 30.91 3.06
4754 5258 7.148474 CCAAAACATTACGCACTAGTAGAATGT 60.148 37.037 3.59 13.80 32.50 2.71
4755 5259 7.064134 TCCAAAACATTACGCACTAGTAGAATG 59.936 37.037 3.59 5.67 0.00 2.67
4756 5260 7.101054 TCCAAAACATTACGCACTAGTAGAAT 58.899 34.615 3.59 0.00 0.00 2.40
4757 5261 6.457355 TCCAAAACATTACGCACTAGTAGAA 58.543 36.000 3.59 0.00 0.00 2.10
4758 5262 6.028146 TCCAAAACATTACGCACTAGTAGA 57.972 37.500 3.59 0.00 0.00 2.59
4759 5263 5.867716 ACTCCAAAACATTACGCACTAGTAG 59.132 40.000 0.00 0.00 0.00 2.57
4760 5264 5.786311 ACTCCAAAACATTACGCACTAGTA 58.214 37.500 0.00 0.00 0.00 1.82
4761 5265 4.638304 ACTCCAAAACATTACGCACTAGT 58.362 39.130 0.00 0.00 0.00 2.57
4762 5266 5.607119 AACTCCAAAACATTACGCACTAG 57.393 39.130 0.00 0.00 0.00 2.57
4763 5267 5.297278 ACAAACTCCAAAACATTACGCACTA 59.703 36.000 0.00 0.00 0.00 2.74
4764 5268 4.097286 ACAAACTCCAAAACATTACGCACT 59.903 37.500 0.00 0.00 0.00 4.40
4765 5269 4.356289 ACAAACTCCAAAACATTACGCAC 58.644 39.130 0.00 0.00 0.00 5.34
4766 5270 4.096532 TGACAAACTCCAAAACATTACGCA 59.903 37.500 0.00 0.00 0.00 5.24
4767 5271 4.602995 TGACAAACTCCAAAACATTACGC 58.397 39.130 0.00 0.00 0.00 4.42
4768 5272 6.143758 CCAATGACAAACTCCAAAACATTACG 59.856 38.462 0.00 0.00 0.00 3.18
4797 5301 4.524802 TGGGGCAGAAATAGATCATGTT 57.475 40.909 0.00 0.00 0.00 2.71
4807 5311 1.002069 TGGTGAGATGGGGCAGAAAT 58.998 50.000 0.00 0.00 0.00 2.17
4824 5328 6.918022 GGTTTGAAGTTTCAGTTATTGTCTGG 59.082 38.462 0.00 0.00 38.61 3.86
4827 5331 7.703328 TCAGGTTTGAAGTTTCAGTTATTGTC 58.297 34.615 0.00 0.00 38.61 3.18
4832 5336 8.519799 AGAAATCAGGTTTGAAGTTTCAGTTA 57.480 30.769 0.00 0.00 35.90 2.24
4835 5339 8.159344 AGTAGAAATCAGGTTTGAAGTTTCAG 57.841 34.615 0.00 0.00 35.90 3.02
4840 5344 8.598041 ACTCATAGTAGAAATCAGGTTTGAAGT 58.402 33.333 0.00 0.00 36.78 3.01
4845 5349 9.965902 ATTGAACTCATAGTAGAAATCAGGTTT 57.034 29.630 0.00 0.00 0.00 3.27
4846 5350 9.965902 AATTGAACTCATAGTAGAAATCAGGTT 57.034 29.630 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.