Multiple sequence alignment - TraesCS3D01G144300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G144300 chr3D 100.000 9166 0 0 1 9166 107658646 107667811 0.000000e+00 16927.0
1 TraesCS3D01G144300 chr3D 91.500 200 16 1 1 199 600582899 600583098 3.260000e-69 274.0
2 TraesCS3D01G144300 chr3B 94.688 2579 92 25 608 3164 158695859 158698414 0.000000e+00 3962.0
3 TraesCS3D01G144300 chr3B 97.683 2287 33 6 3174 5447 158698461 158700740 0.000000e+00 3912.0
4 TraesCS3D01G144300 chr3B 93.090 1838 64 22 7353 9166 158702961 158704759 0.000000e+00 2632.0
5 TraesCS3D01G144300 chr3B 93.215 1017 42 6 5447 6462 158700785 158701775 0.000000e+00 1471.0
6 TraesCS3D01G144300 chr3B 97.669 472 10 1 6460 6930 158702071 158702542 0.000000e+00 809.0
7 TraesCS3D01G144300 chr3B 87.603 242 25 5 7016 7254 158702724 158702963 9.070000e-70 276.0
8 TraesCS3D01G144300 chr3B 90.500 200 18 1 1 199 375225840 375226039 7.060000e-66 263.0
9 TraesCS3D01G144300 chr3B 78.019 323 33 25 289 598 158695519 158695816 1.580000e-37 169.0
10 TraesCS3D01G144300 chr3B 95.455 88 4 0 6929 7016 158702568 158702655 3.450000e-29 141.0
11 TraesCS3D01G144300 chr3B 97.917 48 1 0 7098 7145 158702853 158702806 5.900000e-12 84.2
12 TraesCS3D01G144300 chr3B 83.158 95 10 4 2375 2466 772403736 772403645 2.120000e-11 82.4
13 TraesCS3D01G144300 chr3A 89.233 2554 159 48 262 2757 124196424 124193929 0.000000e+00 3086.0
14 TraesCS3D01G144300 chr3A 91.966 2228 99 38 2712 4875 124193920 124191709 0.000000e+00 3049.0
15 TraesCS3D01G144300 chr3A 94.135 989 53 4 5448 6433 124190571 124189585 0.000000e+00 1500.0
16 TraesCS3D01G144300 chr3A 94.701 585 28 2 4863 5447 124191195 124190614 0.000000e+00 905.0
17 TraesCS3D01G144300 chr3A 89.937 636 34 10 7353 7984 124188483 124187874 0.000000e+00 793.0
18 TraesCS3D01G144300 chr3A 80.281 1212 101 68 7997 9166 124187828 124186713 0.000000e+00 787.0
19 TraesCS3D01G144300 chr3A 95.807 477 16 4 6460 6934 124189370 124188896 0.000000e+00 767.0
20 TraesCS3D01G144300 chr3A 85.957 235 24 6 7016 7246 124188715 124188486 9.200000e-60 243.0
21 TraesCS3D01G144300 chr3A 92.982 114 4 3 7245 7354 368681674 368681561 7.360000e-36 163.0
22 TraesCS3D01G144300 chr3A 91.228 114 6 4 7245 7354 368801022 368801135 1.590000e-32 152.0
23 TraesCS3D01G144300 chr3A 91.228 114 6 4 7249 7358 608386701 608386814 1.590000e-32 152.0
24 TraesCS3D01G144300 chr3A 91.964 112 4 5 7248 7354 683742536 683742425 1.590000e-32 152.0
25 TraesCS3D01G144300 chr5D 94.444 180 10 0 1 180 415734929 415734750 2.520000e-70 278.0
26 TraesCS3D01G144300 chr5D 92.424 66 5 0 3791 3856 44603381 44603316 2.720000e-15 95.3
27 TraesCS3D01G144300 chr7B 91.414 198 16 1 3 199 220147271 220147074 4.220000e-68 270.0
28 TraesCS3D01G144300 chr7B 90.909 198 17 1 3 199 132144438 132144635 1.960000e-66 265.0
29 TraesCS3D01G144300 chr7B 90.000 50 4 1 3990 4039 159509376 159509424 7.680000e-06 63.9
30 TraesCS3D01G144300 chr2B 91.000 200 17 1 1 199 250057498 250057299 1.520000e-67 268.0
31 TraesCS3D01G144300 chr2B 90.955 199 17 1 3 200 89528417 89528615 5.460000e-67 267.0
32 TraesCS3D01G144300 chr2B 90.547 201 17 2 1 199 321960128 321960328 1.960000e-66 265.0
33 TraesCS3D01G144300 chr2B 90.500 200 18 1 1 199 159011921 159012120 7.060000e-66 263.0
34 TraesCS3D01G144300 chr2B 76.818 220 36 11 3849 4062 177217354 177217144 9.730000e-20 110.0
35 TraesCS3D01G144300 chr1B 81.271 299 36 13 2832 3127 463568173 463568454 3.330000e-54 224.0
36 TraesCS3D01G144300 chr6B 80.602 299 39 12 2832 3127 221719463 221719745 7.210000e-51 213.0
37 TraesCS3D01G144300 chr6B 93.846 65 4 0 3792 3856 688503729 688503665 2.110000e-16 99.0
38 TraesCS3D01G144300 chr4D 92.920 113 5 1 7251 7360 39211021 39210909 2.650000e-35 161.0
39 TraesCS3D01G144300 chr4D 93.846 65 4 0 3792 3856 366699075 366699139 2.110000e-16 99.0
40 TraesCS3D01G144300 chr2A 92.857 112 4 4 7250 7357 748957447 748957558 9.530000e-35 159.0
41 TraesCS3D01G144300 chr2A 91.964 112 4 3 7249 7355 565200954 565200843 1.590000e-32 152.0
42 TraesCS3D01G144300 chr6A 92.793 111 4 4 7251 7357 8192964 8193074 3.430000e-34 158.0
43 TraesCS3D01G144300 chr5A 88.618 123 9 4 3787 3909 27508369 27508252 2.670000e-30 145.0
44 TraesCS3D01G144300 chr4B 89.744 117 7 3 7242 7357 443598354 443598242 2.670000e-30 145.0
45 TraesCS3D01G144300 chr5B 85.833 120 16 1 3787 3906 29564548 29564666 9.660000e-25 126.0
46 TraesCS3D01G144300 chr2D 77.273 220 37 10 3849 4060 124796818 124796604 5.820000e-22 117.0
47 TraesCS3D01G144300 chr4A 91.781 73 5 1 3785 3856 98552207 98552135 5.860000e-17 100.0
48 TraesCS3D01G144300 chr7A 92.424 66 5 0 3791 3856 91681472 91681407 2.720000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G144300 chr3D 107658646 107667811 9165 False 16927.00 16927 100.000000 1 9166 1 chr3D.!!$F1 9165
1 TraesCS3D01G144300 chr3B 158695519 158704759 9240 False 1671.50 3962 92.177750 289 9166 8 chr3B.!!$F2 8877
2 TraesCS3D01G144300 chr3A 124186713 124196424 9711 True 1391.25 3086 90.252125 262 9166 8 chr3A.!!$R3 8904

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
859 943 0.035439 AGCCGACCGAACAATCCAAT 60.035 50.000 0.00 0.0 0.00 3.16 F
865 949 0.258774 CCGAACAATCCAATCCCCCT 59.741 55.000 0.00 0.0 0.00 4.79 F
872 956 0.327576 ATCCAATCCCCCTTCTCCGT 60.328 55.000 0.00 0.0 0.00 4.69 F
1374 1461 1.071471 CTCGGGCTGTTTCAGTGGT 59.929 57.895 0.00 0.0 33.43 4.16 F
1683 1770 1.378531 TTGTGCTCAACTCTTGCGTT 58.621 45.000 0.00 0.0 0.00 4.84 F
1852 1943 1.626321 TCTTTTCCGTGGGCTCACATA 59.374 47.619 18.70 0.0 43.79 2.29 F
1862 1953 2.766263 TGGGCTCACATAGTCGAATTCT 59.234 45.455 3.52 0.0 0.00 2.40 F
2411 2522 2.812011 GACCAAGGTGCTTCGTATGTTT 59.188 45.455 0.00 0.0 0.00 2.83 F
3408 3625 3.858247 AGGTCGCATTAGTTCTTACCAC 58.142 45.455 0.00 0.0 0.00 4.16 F
4372 4607 4.651778 TGAGGATTGGGACTACAACAAAG 58.348 43.478 0.00 0.0 32.39 2.77 F
5666 6474 1.189403 GTCGTCGCTCAAATACTCCG 58.811 55.000 0.00 0.0 0.00 4.63 F
6450 7261 1.281419 CACCACCCCCTACACATACA 58.719 55.000 0.00 0.0 0.00 2.29 F
7814 9044 0.689055 TCATGCTCTCACACCTGCTT 59.311 50.000 0.00 0.0 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1692 1779 0.994995 CGAAGAACATGACGCAGAGG 59.005 55.000 0.00 0.00 0.00 3.69 R
2216 2318 1.257743 TTAGATAGCAGCCTAGCCGG 58.742 55.000 0.00 0.00 30.25 6.13 R
2238 2340 3.295973 ACCACCTGCAACACAGTAAATT 58.704 40.909 0.00 0.00 45.68 1.82 R
3073 3246 4.797471 TGTCAAATGCTTACATGTGCTTC 58.203 39.130 9.11 0.00 40.79 3.86 R
3408 3625 0.040204 AATCCTCAAAGGGGTGGCTG 59.960 55.000 0.00 0.00 35.59 4.85 R
3574 3791 7.422465 AATATCCTGCCAGCAAAAAGAATAA 57.578 32.000 0.00 0.00 0.00 1.40 R
4161 4395 7.680730 AGCAACTCTTCTTTCTTAATACCTGA 58.319 34.615 0.00 0.00 0.00 3.86 R
4218 4452 0.106268 AACCACACACAGCCCATGAA 60.106 50.000 0.00 0.00 0.00 2.57 R
4752 4989 2.710902 GCGGAAACAATGAGGCCCC 61.711 63.158 0.00 0.00 0.00 5.80 R
6304 7115 0.400213 ACCTCCTGGTGATTTTCGCA 59.600 50.000 0.00 0.00 46.51 5.10 R
7747 8977 0.827368 GGGCGATGTTTCCTCTCTCT 59.173 55.000 0.00 0.00 0.00 3.10 R
7852 9083 0.870735 CATGCACTGCAAACGCAACA 60.871 50.000 8.03 0.00 43.62 3.33 R
8915 10221 1.840741 CGACGAGTAAGTGCATCTTCG 59.159 52.381 5.04 2.39 37.56 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.931385 AATAGTTTGTCAAAACATATCCATGC 57.069 30.769 0.00 0.00 46.80 4.06
31 32 5.401550 AGTTTGTCAAAACATATCCATGCG 58.598 37.500 0.00 0.00 46.80 4.73
32 33 4.368874 TTGTCAAAACATATCCATGCGG 57.631 40.909 0.00 0.00 35.39 5.69
33 34 2.687425 TGTCAAAACATATCCATGCGGG 59.313 45.455 0.00 0.00 35.39 6.13
34 35 5.110137 TTGTCAAAACATATCCATGCGGGA 61.110 41.667 0.00 0.00 42.35 5.14
43 44 2.910688 TCCATGCGGGATCTAGTTTC 57.089 50.000 0.00 0.00 42.15 2.78
44 45 1.068588 TCCATGCGGGATCTAGTTTCG 59.931 52.381 0.00 0.00 42.15 3.46
45 46 1.068588 CCATGCGGGATCTAGTTTCGA 59.931 52.381 0.00 0.00 40.01 3.71
46 47 2.483013 CCATGCGGGATCTAGTTTCGAA 60.483 50.000 0.00 0.00 40.01 3.71
47 48 2.579207 TGCGGGATCTAGTTTCGAAG 57.421 50.000 0.00 0.00 0.00 3.79
48 49 2.097036 TGCGGGATCTAGTTTCGAAGA 58.903 47.619 0.00 0.00 0.00 2.87
49 50 2.099263 TGCGGGATCTAGTTTCGAAGAG 59.901 50.000 0.00 0.00 38.43 2.85
50 51 2.733517 CGGGATCTAGTTTCGAAGAGC 58.266 52.381 0.00 0.00 38.43 4.09
51 52 2.099263 CGGGATCTAGTTTCGAAGAGCA 59.901 50.000 0.00 0.00 38.43 4.26
52 53 3.449632 GGGATCTAGTTTCGAAGAGCAC 58.550 50.000 0.00 0.00 38.43 4.40
53 54 3.119101 GGGATCTAGTTTCGAAGAGCACA 60.119 47.826 0.00 0.00 38.43 4.57
54 55 4.442192 GGGATCTAGTTTCGAAGAGCACAT 60.442 45.833 0.00 0.00 38.43 3.21
55 56 4.742659 GGATCTAGTTTCGAAGAGCACATC 59.257 45.833 0.00 0.00 38.43 3.06
56 57 3.759418 TCTAGTTTCGAAGAGCACATCG 58.241 45.455 2.25 2.25 38.43 3.84
57 58 1.071605 AGTTTCGAAGAGCACATCGC 58.928 50.000 3.84 0.00 38.43 4.58
68 69 2.014641 GCACATCGCGATGATTTCAG 57.985 50.000 45.64 28.77 41.20 3.02
69 70 1.918974 GCACATCGCGATGATTTCAGC 60.919 52.381 45.64 32.58 41.20 4.26
81 82 3.790691 TTTCAGCGGTGAAAGTGGA 57.209 47.368 32.56 15.49 45.82 4.02
82 83 2.270352 TTTCAGCGGTGAAAGTGGAT 57.730 45.000 32.56 0.00 45.82 3.41
83 84 1.808411 TTCAGCGGTGAAAGTGGATC 58.192 50.000 26.54 0.00 39.85 3.36
84 85 0.976641 TCAGCGGTGAAAGTGGATCT 59.023 50.000 16.20 0.00 0.00 2.75
85 86 1.347707 TCAGCGGTGAAAGTGGATCTT 59.652 47.619 16.20 0.00 38.10 2.40
86 87 2.565391 TCAGCGGTGAAAGTGGATCTTA 59.435 45.455 16.20 0.00 35.02 2.10
87 88 3.007506 TCAGCGGTGAAAGTGGATCTTAA 59.992 43.478 16.20 0.00 35.02 1.85
88 89 3.941483 CAGCGGTGAAAGTGGATCTTAAT 59.059 43.478 9.50 0.00 35.02 1.40
89 90 4.396166 CAGCGGTGAAAGTGGATCTTAATT 59.604 41.667 9.50 0.00 35.02 1.40
90 91 5.010282 AGCGGTGAAAGTGGATCTTAATTT 58.990 37.500 0.00 0.00 35.02 1.82
91 92 5.476945 AGCGGTGAAAGTGGATCTTAATTTT 59.523 36.000 0.00 0.00 35.02 1.82
92 93 5.572896 GCGGTGAAAGTGGATCTTAATTTTG 59.427 40.000 0.00 0.00 35.02 2.44
93 94 6.569610 GCGGTGAAAGTGGATCTTAATTTTGA 60.570 38.462 0.00 0.00 35.02 2.69
94 95 7.538575 CGGTGAAAGTGGATCTTAATTTTGAT 58.461 34.615 0.00 0.00 35.02 2.57
95 96 7.485913 CGGTGAAAGTGGATCTTAATTTTGATG 59.514 37.037 0.00 0.00 35.02 3.07
96 97 8.306761 GGTGAAAGTGGATCTTAATTTTGATGT 58.693 33.333 0.00 0.00 35.02 3.06
97 98 9.696917 GTGAAAGTGGATCTTAATTTTGATGTT 57.303 29.630 0.00 0.00 35.02 2.71
100 101 9.492973 AAAGTGGATCTTAATTTTGATGTTTGG 57.507 29.630 0.00 0.00 35.02 3.28
101 102 8.193953 AGTGGATCTTAATTTTGATGTTTGGT 57.806 30.769 0.00 0.00 0.00 3.67
102 103 8.650490 AGTGGATCTTAATTTTGATGTTTGGTT 58.350 29.630 0.00 0.00 0.00 3.67
103 104 9.271828 GTGGATCTTAATTTTGATGTTTGGTTT 57.728 29.630 0.00 0.00 0.00 3.27
115 116 9.892130 TTTGATGTTTGGTTTAAAAGTTATGGT 57.108 25.926 0.00 0.00 0.00 3.55
116 117 9.892130 TTGATGTTTGGTTTAAAAGTTATGGTT 57.108 25.926 0.00 0.00 0.00 3.67
117 118 9.892130 TGATGTTTGGTTTAAAAGTTATGGTTT 57.108 25.926 0.00 0.00 0.00 3.27
153 154 9.413048 ACAAAAATTGAAAAACAAACTAGACGA 57.587 25.926 0.00 0.00 42.03 4.20
156 157 9.796120 AAAATTGAAAAACAAACTAGACGATCA 57.204 25.926 0.00 0.00 42.03 2.92
157 158 9.796120 AAATTGAAAAACAAACTAGACGATCAA 57.204 25.926 0.00 0.00 42.03 2.57
158 159 8.782533 ATTGAAAAACAAACTAGACGATCAAC 57.217 30.769 0.00 0.00 42.03 3.18
159 160 7.548196 TGAAAAACAAACTAGACGATCAACT 57.452 32.000 0.00 0.00 0.00 3.16
160 161 7.981142 TGAAAAACAAACTAGACGATCAACTT 58.019 30.769 0.00 0.00 0.00 2.66
161 162 8.120465 TGAAAAACAAACTAGACGATCAACTTC 58.880 33.333 0.00 0.00 0.00 3.01
162 163 6.541111 AAACAAACTAGACGATCAACTTCC 57.459 37.500 0.00 0.00 0.00 3.46
163 164 5.470047 ACAAACTAGACGATCAACTTCCT 57.530 39.130 0.00 0.00 0.00 3.36
164 165 5.855045 ACAAACTAGACGATCAACTTCCTT 58.145 37.500 0.00 0.00 0.00 3.36
165 166 6.289064 ACAAACTAGACGATCAACTTCCTTT 58.711 36.000 0.00 0.00 0.00 3.11
166 167 6.766467 ACAAACTAGACGATCAACTTCCTTTT 59.234 34.615 0.00 0.00 0.00 2.27
167 168 6.787085 AACTAGACGATCAACTTCCTTTTG 57.213 37.500 0.00 0.00 0.00 2.44
168 169 5.855045 ACTAGACGATCAACTTCCTTTTGT 58.145 37.500 0.00 0.00 0.00 2.83
169 170 5.696724 ACTAGACGATCAACTTCCTTTTGTG 59.303 40.000 0.00 0.00 0.00 3.33
170 171 4.451900 AGACGATCAACTTCCTTTTGTGT 58.548 39.130 0.00 0.00 0.00 3.72
171 172 5.607477 AGACGATCAACTTCCTTTTGTGTA 58.393 37.500 0.00 0.00 0.00 2.90
172 173 5.465724 AGACGATCAACTTCCTTTTGTGTAC 59.534 40.000 0.00 0.00 0.00 2.90
173 174 5.120399 ACGATCAACTTCCTTTTGTGTACA 58.880 37.500 0.00 0.00 0.00 2.90
174 175 5.587043 ACGATCAACTTCCTTTTGTGTACAA 59.413 36.000 0.00 0.00 0.00 2.41
175 176 5.907391 CGATCAACTTCCTTTTGTGTACAAC 59.093 40.000 0.00 0.00 35.28 3.32
176 177 5.224562 TCAACTTCCTTTTGTGTACAACG 57.775 39.130 0.00 0.00 35.28 4.10
177 178 4.095185 TCAACTTCCTTTTGTGTACAACGG 59.905 41.667 0.00 1.99 35.28 4.44
178 179 3.876341 ACTTCCTTTTGTGTACAACGGA 58.124 40.909 0.00 9.61 35.30 4.69
179 180 3.624410 ACTTCCTTTTGTGTACAACGGAC 59.376 43.478 12.08 0.00 36.21 4.79
180 181 3.263489 TCCTTTTGTGTACAACGGACA 57.737 42.857 0.00 0.00 35.28 4.02
181 182 3.811083 TCCTTTTGTGTACAACGGACAT 58.189 40.909 0.00 0.00 35.28 3.06
182 183 3.562141 TCCTTTTGTGTACAACGGACATG 59.438 43.478 0.00 0.00 35.28 3.21
183 184 3.314080 CCTTTTGTGTACAACGGACATGT 59.686 43.478 0.00 0.00 35.28 3.21
184 185 4.512198 CCTTTTGTGTACAACGGACATGTA 59.488 41.667 0.00 0.00 35.28 2.29
185 186 5.180492 CCTTTTGTGTACAACGGACATGTAT 59.820 40.000 0.00 0.00 35.84 2.29
186 187 6.293735 CCTTTTGTGTACAACGGACATGTATT 60.294 38.462 0.00 0.00 35.84 1.89
187 188 6.621316 TTTGTGTACAACGGACATGTATTT 57.379 33.333 0.00 0.00 35.84 1.40
188 189 5.599359 TGTGTACAACGGACATGTATTTG 57.401 39.130 0.00 5.18 35.84 2.32
189 190 4.083749 TGTGTACAACGGACATGTATTTGC 60.084 41.667 0.00 0.00 35.84 3.68
190 191 3.437395 TGTACAACGGACATGTATTTGCC 59.563 43.478 0.00 0.00 35.84 4.52
191 192 2.790433 ACAACGGACATGTATTTGCCT 58.210 42.857 0.00 0.00 0.00 4.75
192 193 3.153919 ACAACGGACATGTATTTGCCTT 58.846 40.909 0.00 0.00 0.00 4.35
193 194 3.572255 ACAACGGACATGTATTTGCCTTT 59.428 39.130 0.00 0.00 0.00 3.11
194 195 4.038642 ACAACGGACATGTATTTGCCTTTT 59.961 37.500 0.00 0.00 0.00 2.27
195 196 4.434713 ACGGACATGTATTTGCCTTTTC 57.565 40.909 0.00 0.00 0.00 2.29
196 197 3.192633 ACGGACATGTATTTGCCTTTTCC 59.807 43.478 0.00 0.00 0.00 3.13
197 198 3.192422 CGGACATGTATTTGCCTTTTCCA 59.808 43.478 0.00 0.00 0.00 3.53
198 199 4.494484 GGACATGTATTTGCCTTTTCCAC 58.506 43.478 0.00 0.00 0.00 4.02
199 200 4.220602 GGACATGTATTTGCCTTTTCCACT 59.779 41.667 0.00 0.00 0.00 4.00
200 201 5.391312 ACATGTATTTGCCTTTTCCACTC 57.609 39.130 0.00 0.00 0.00 3.51
201 202 4.220602 ACATGTATTTGCCTTTTCCACTCC 59.779 41.667 0.00 0.00 0.00 3.85
202 203 2.817258 TGTATTTGCCTTTTCCACTCCG 59.183 45.455 0.00 0.00 0.00 4.63
203 204 2.286365 ATTTGCCTTTTCCACTCCGA 57.714 45.000 0.00 0.00 0.00 4.55
204 205 2.060050 TTTGCCTTTTCCACTCCGAA 57.940 45.000 0.00 0.00 0.00 4.30
205 206 1.604604 TTGCCTTTTCCACTCCGAAG 58.395 50.000 0.00 0.00 0.00 3.79
206 207 0.889186 TGCCTTTTCCACTCCGAAGC 60.889 55.000 0.00 0.00 0.00 3.86
207 208 0.606673 GCCTTTTCCACTCCGAAGCT 60.607 55.000 0.00 0.00 0.00 3.74
208 209 1.443802 CCTTTTCCACTCCGAAGCTC 58.556 55.000 0.00 0.00 0.00 4.09
209 210 1.002544 CCTTTTCCACTCCGAAGCTCT 59.997 52.381 0.00 0.00 0.00 4.09
210 211 2.551071 CCTTTTCCACTCCGAAGCTCTT 60.551 50.000 0.00 0.00 0.00 2.85
211 212 2.457366 TTTCCACTCCGAAGCTCTTC 57.543 50.000 0.00 0.00 36.29 2.87
212 213 0.608640 TTCCACTCCGAAGCTCTTCC 59.391 55.000 4.23 0.00 36.27 3.46
213 214 0.251832 TCCACTCCGAAGCTCTTCCT 60.252 55.000 4.23 0.00 36.27 3.36
214 215 0.108424 CCACTCCGAAGCTCTTCCTG 60.108 60.000 4.23 0.00 36.27 3.86
215 216 0.108424 CACTCCGAAGCTCTTCCTGG 60.108 60.000 4.23 1.51 36.27 4.45
216 217 1.153469 CTCCGAAGCTCTTCCTGGC 60.153 63.158 4.23 0.00 36.27 4.85
217 218 2.510238 CCGAAGCTCTTCCTGGCG 60.510 66.667 4.23 0.00 36.27 5.69
218 219 3.191539 CGAAGCTCTTCCTGGCGC 61.192 66.667 0.00 0.00 36.27 6.53
219 220 2.821810 GAAGCTCTTCCTGGCGCC 60.822 66.667 22.73 22.73 33.64 6.53
220 221 4.416738 AAGCTCTTCCTGGCGCCC 62.417 66.667 26.77 5.30 0.00 6.13
223 224 3.710722 CTCTTCCTGGCGCCCACT 61.711 66.667 26.77 0.00 0.00 4.00
224 225 2.284331 TCTTCCTGGCGCCCACTA 60.284 61.111 26.77 3.41 0.00 2.74
225 226 1.689233 TCTTCCTGGCGCCCACTAT 60.689 57.895 26.77 0.00 0.00 2.12
226 227 0.397957 TCTTCCTGGCGCCCACTATA 60.398 55.000 26.77 2.02 0.00 1.31
227 228 0.249911 CTTCCTGGCGCCCACTATAC 60.250 60.000 26.77 0.00 0.00 1.47
228 229 2.023414 TTCCTGGCGCCCACTATACG 62.023 60.000 26.77 1.75 0.00 3.06
229 230 2.029073 CTGGCGCCCACTATACGG 59.971 66.667 26.77 0.00 0.00 4.02
231 232 3.543641 GGCGCCCACTATACGGGT 61.544 66.667 18.11 0.00 46.40 5.28
232 233 2.028631 GCGCCCACTATACGGGTC 59.971 66.667 0.00 0.00 46.40 4.46
233 234 2.732658 CGCCCACTATACGGGTCC 59.267 66.667 4.70 0.00 46.40 4.46
234 235 1.831286 CGCCCACTATACGGGTCCT 60.831 63.158 4.70 0.00 46.40 3.85
235 236 1.397390 CGCCCACTATACGGGTCCTT 61.397 60.000 4.70 0.00 46.40 3.36
236 237 0.835276 GCCCACTATACGGGTCCTTT 59.165 55.000 4.70 0.00 46.40 3.11
237 238 1.474498 GCCCACTATACGGGTCCTTTG 60.474 57.143 4.70 0.00 46.40 2.77
238 239 1.835531 CCCACTATACGGGTCCTTTGT 59.164 52.381 0.00 0.00 39.05 2.83
239 240 2.237893 CCCACTATACGGGTCCTTTGTT 59.762 50.000 0.00 0.00 39.05 2.83
240 241 3.307904 CCCACTATACGGGTCCTTTGTTT 60.308 47.826 0.00 0.00 39.05 2.83
241 242 4.329392 CCACTATACGGGTCCTTTGTTTT 58.671 43.478 0.00 0.00 0.00 2.43
242 243 4.763279 CCACTATACGGGTCCTTTGTTTTT 59.237 41.667 0.00 0.00 0.00 1.94
296 297 3.050275 GCACCAAGGACAGGACGC 61.050 66.667 0.00 0.00 0.00 5.19
373 374 1.446792 CTCTGCGTCATCTGCGGTT 60.447 57.895 0.00 0.00 39.73 4.44
386 387 2.101770 CGGTTACCGGAGTCTCGC 59.898 66.667 17.00 0.00 44.15 5.03
387 388 2.101770 GGTTACCGGAGTCTCGCG 59.898 66.667 9.46 0.00 0.00 5.87
445 459 2.045242 GGGAGTTTCCTTCCGGGC 60.045 66.667 0.00 0.00 36.57 6.13
447 461 2.603652 GGAGTTTCCTTCCGGGCCT 61.604 63.158 0.84 0.00 32.53 5.19
520 539 0.536006 GAATCCAATGGCCGAGGAGG 60.536 60.000 14.85 5.18 44.97 4.30
521 540 0.988145 AATCCAATGGCCGAGGAGGA 60.988 55.000 14.85 10.06 45.00 3.71
532 551 1.068885 CCGAGGAGGAATCGATTCTCG 60.069 57.143 31.32 29.16 45.00 4.04
570 595 1.153667 GCACGAGCCAGAGGAGAAG 60.154 63.158 0.00 0.00 33.58 2.85
598 623 1.626654 ATCCGCGCGAAAACTCTGTG 61.627 55.000 34.63 10.51 0.00 3.66
599 624 2.307309 CCGCGCGAAAACTCTGTGA 61.307 57.895 34.63 0.00 0.00 3.58
605 657 1.591158 GCGAAAACTCTGTGACGTTGA 59.409 47.619 0.00 0.00 0.00 3.18
627 685 1.889530 CGTCTTCCCCACCTCACTCC 61.890 65.000 0.00 0.00 0.00 3.85
631 689 4.354943 CCCCACCTCACTCCCCCT 62.355 72.222 0.00 0.00 0.00 4.79
653 715 1.289530 CTCCCCTCTTCCTACTGGAGT 59.710 57.143 0.00 0.00 44.24 3.85
690 760 1.065109 AGGCAACGCGTTCCAAAAC 59.935 52.632 29.35 15.63 46.39 2.43
695 765 1.511147 CAACGCGTTCCAAAACTTTCG 59.489 47.619 23.92 1.96 32.95 3.46
708 783 5.163903 CCAAAACTTTCGTTCAAAACCCAAG 60.164 40.000 0.00 0.00 31.66 3.61
802 884 2.734591 GCATCGTCCCTATCCGCA 59.265 61.111 0.00 0.00 0.00 5.69
833 917 2.817087 GCCTCAAATCCATCCCCATCTC 60.817 54.545 0.00 0.00 0.00 2.75
834 918 2.551721 CCTCAAATCCATCCCCATCTCG 60.552 54.545 0.00 0.00 0.00 4.04
835 919 1.421268 TCAAATCCATCCCCATCTCGG 59.579 52.381 0.00 0.00 0.00 4.63
836 920 1.421268 CAAATCCATCCCCATCTCGGA 59.579 52.381 0.00 0.00 36.56 4.55
857 941 1.079405 GAGCCGACCGAACAATCCA 60.079 57.895 0.00 0.00 0.00 3.41
858 942 0.672401 GAGCCGACCGAACAATCCAA 60.672 55.000 0.00 0.00 0.00 3.53
859 943 0.035439 AGCCGACCGAACAATCCAAT 60.035 50.000 0.00 0.00 0.00 3.16
860 944 0.377203 GCCGACCGAACAATCCAATC 59.623 55.000 0.00 0.00 0.00 2.67
865 949 0.258774 CCGAACAATCCAATCCCCCT 59.741 55.000 0.00 0.00 0.00 4.79
866 950 1.341976 CCGAACAATCCAATCCCCCTT 60.342 52.381 0.00 0.00 0.00 3.95
867 951 2.024414 CGAACAATCCAATCCCCCTTC 58.976 52.381 0.00 0.00 0.00 3.46
868 952 2.357154 CGAACAATCCAATCCCCCTTCT 60.357 50.000 0.00 0.00 0.00 2.85
869 953 3.291584 GAACAATCCAATCCCCCTTCTC 58.708 50.000 0.00 0.00 0.00 2.87
872 956 0.327576 ATCCAATCCCCCTTCTCCGT 60.328 55.000 0.00 0.00 0.00 4.69
888 972 3.958798 TCTCCGTCCTTAAATCCCTACTG 59.041 47.826 0.00 0.00 0.00 2.74
893 977 2.102588 TCCTTAAATCCCTACTGCTCGC 59.897 50.000 0.00 0.00 0.00 5.03
1326 1413 2.787567 GGAGGAGGAGCTGTACCGC 61.788 68.421 0.27 0.27 0.00 5.68
1374 1461 1.071471 CTCGGGCTGTTTCAGTGGT 59.929 57.895 0.00 0.00 33.43 4.16
1415 1502 3.936772 ATGCCGGTGGGAAATGCGT 62.937 57.895 1.90 0.00 34.06 5.24
1482 1569 2.754658 GCTGCTGCTGGGAATGCT 60.755 61.111 8.53 0.00 36.03 3.79
1485 1572 3.834799 GCTGCTGGGAATGCTGGC 61.835 66.667 0.00 0.00 0.00 4.85
1487 1574 4.764771 TGCTGGGAATGCTGGCCC 62.765 66.667 0.00 0.00 44.93 5.80
1512 1599 1.911766 GAGGTCCTCGGTGGTGGAA 60.912 63.158 2.28 0.00 37.56 3.53
1605 1692 3.948719 GTGTGGGCAAGGTCGGGA 61.949 66.667 0.00 0.00 0.00 5.14
1638 1725 3.781307 TGGCCCGCGCTAGTGATT 61.781 61.111 7.68 0.00 34.44 2.57
1683 1770 1.378531 TTGTGCTCAACTCTTGCGTT 58.621 45.000 0.00 0.00 0.00 4.84
1775 1866 1.812571 CCTGGATAAGCGTTGCAGTTT 59.187 47.619 0.00 0.00 31.27 2.66
1794 1885 4.102054 AGTTTTCTTTCCCTGGTCGAGTTA 59.898 41.667 0.00 0.00 0.00 2.24
1802 1893 2.224450 CCCTGGTCGAGTTAGTTGGTTT 60.224 50.000 0.00 0.00 0.00 3.27
1803 1894 3.007182 CCCTGGTCGAGTTAGTTGGTTTA 59.993 47.826 0.00 0.00 0.00 2.01
1852 1943 1.626321 TCTTTTCCGTGGGCTCACATA 59.374 47.619 18.70 0.00 43.79 2.29
1862 1953 2.766263 TGGGCTCACATAGTCGAATTCT 59.234 45.455 3.52 0.00 0.00 2.40
1918 2009 4.344104 GGATGATCTTTCCCTTTGTGGAA 58.656 43.478 4.42 0.00 42.62 3.53
1929 2020 7.758820 TTCCCTTTGTGGAATACCTAGATAA 57.241 36.000 0.00 0.00 39.48 1.75
2182 2284 6.106673 GGAGTTGTAATAGCTGAGCTTGTAA 58.893 40.000 14.14 0.00 40.44 2.41
2183 2285 6.763610 GGAGTTGTAATAGCTGAGCTTGTAAT 59.236 38.462 14.14 0.00 40.44 1.89
2184 2286 7.042389 GGAGTTGTAATAGCTGAGCTTGTAATC 60.042 40.741 14.14 1.74 40.44 1.75
2185 2287 7.560368 AGTTGTAATAGCTGAGCTTGTAATCT 58.440 34.615 14.14 1.10 40.44 2.40
2186 2288 8.043710 AGTTGTAATAGCTGAGCTTGTAATCTT 58.956 33.333 14.14 0.00 40.44 2.40
2187 2289 7.776933 TGTAATAGCTGAGCTTGTAATCTTG 57.223 36.000 14.14 0.00 40.44 3.02
2188 2290 7.331026 TGTAATAGCTGAGCTTGTAATCTTGT 58.669 34.615 14.14 0.00 40.44 3.16
2189 2291 8.474831 TGTAATAGCTGAGCTTGTAATCTTGTA 58.525 33.333 14.14 0.00 40.44 2.41
2190 2292 7.778470 AATAGCTGAGCTTGTAATCTTGTAC 57.222 36.000 14.14 0.00 40.44 2.90
2191 2293 5.413309 AGCTGAGCTTGTAATCTTGTACT 57.587 39.130 0.00 0.00 33.89 2.73
2192 2294 6.531503 AGCTGAGCTTGTAATCTTGTACTA 57.468 37.500 0.00 0.00 33.89 1.82
2193 2295 6.568869 AGCTGAGCTTGTAATCTTGTACTAG 58.431 40.000 0.00 0.00 33.89 2.57
2194 2296 5.233263 GCTGAGCTTGTAATCTTGTACTAGC 59.767 44.000 0.00 9.74 46.61 3.42
2216 2318 5.302823 AGCTACCTCATTTATTGCAATTCCC 59.697 40.000 18.75 0.00 0.00 3.97
2238 2340 3.447586 CCGGCTAGGCTGCTATCTAATTA 59.552 47.826 15.11 0.00 32.89 1.40
2411 2522 2.812011 GACCAAGGTGCTTCGTATGTTT 59.188 45.455 0.00 0.00 0.00 2.83
2940 3112 6.552008 TCCTTCTCAAACCTATGGATGTTTT 58.448 36.000 0.00 0.00 32.60 2.43
3073 3246 4.832248 TGGAAGCATTGTACTTACCAGAG 58.168 43.478 0.00 0.00 0.00 3.35
3408 3625 3.858247 AGGTCGCATTAGTTCTTACCAC 58.142 45.455 0.00 0.00 0.00 4.16
4161 4395 5.515008 GGTGGGAATTTCAAGTCTTCTACCT 60.515 44.000 0.00 0.00 0.00 3.08
4200 4434 5.757850 AGAGTTGCTTTCTTTACAAGGTG 57.242 39.130 0.00 0.00 0.00 4.00
4262 4496 7.747888 TGGTGATTTTAATATGACTTCACACG 58.252 34.615 0.00 0.00 35.00 4.49
4372 4607 4.651778 TGAGGATTGGGACTACAACAAAG 58.348 43.478 0.00 0.00 32.39 2.77
4445 4680 7.079451 TCACCTTCACTTAAGAATTCCTTCT 57.921 36.000 10.09 0.00 43.71 2.85
4752 4989 7.546667 CCTGTGAAATTCTTGTATCCCAAAATG 59.453 37.037 0.00 0.00 31.20 2.32
4868 5105 9.574516 AGTTCAGTAATTTCCTTAAGTGTTGAT 57.425 29.630 0.97 0.00 0.00 2.57
4937 5700 5.243507 TGTGATAAGTTTGATTGGTGCACAT 59.756 36.000 20.43 3.94 0.00 3.21
5243 6006 9.860650 AATGGGTAATTATTGTATGTGCTTCTA 57.139 29.630 0.00 0.00 0.00 2.10
5303 6066 7.475771 TTTGTTTTGTTAATTCCAGACATGC 57.524 32.000 0.00 0.00 0.00 4.06
5412 6175 1.227380 CGCATGGAGGTAGACTGCC 60.227 63.158 0.43 0.43 36.59 4.85
5489 6297 8.413309 ACAGAATGCATGTTATTGGCTATATT 57.587 30.769 0.00 0.00 42.53 1.28
5569 6377 4.142622 TGCTTCTGTGTATTATTGCTGTGC 60.143 41.667 0.00 0.00 0.00 4.57
5575 6383 6.260714 TCTGTGTATTATTGCTGTGCATTAGG 59.739 38.462 0.00 0.00 38.76 2.69
5585 6393 6.012658 TGCTGTGCATTAGGAAGTTTTTAG 57.987 37.500 0.00 0.00 31.71 1.85
5613 6421 9.439500 ACCAACTTTTATATTTAAGCTACGTCA 57.561 29.630 0.00 0.00 0.00 4.35
5666 6474 1.189403 GTCGTCGCTCAAATACTCCG 58.811 55.000 0.00 0.00 0.00 4.63
5750 6558 6.209361 TGTTTAAACTGCGCATTATTTGACA 58.791 32.000 12.24 16.65 0.00 3.58
5982 6793 7.309438 GGAAGAACAATTCTAAGTTGGCTTCAT 60.309 37.037 17.30 0.00 40.23 2.57
6080 6891 8.370182 AGAAAATAATGGCAAATATGGTCCATC 58.630 33.333 7.92 0.00 38.28 3.51
6142 6953 5.183904 GTGAAAATGTAACCTGAGGCAGAAT 59.816 40.000 0.00 0.00 32.44 2.40
6145 6956 5.649782 AATGTAACCTGAGGCAGAATTTG 57.350 39.130 0.00 0.00 32.44 2.32
6279 7090 6.907206 TTTTTGCTCCAAAACAATGAGAAG 57.093 33.333 2.87 0.00 42.02 2.85
6304 7115 6.629291 GCAATCTCCTTCAAGACTAGCTAAGT 60.629 42.308 0.00 0.00 42.80 2.24
6346 7157 4.853924 TTTCCTGCTGAAATTTCTGACC 57.146 40.909 24.40 11.15 38.04 4.02
6435 7246 3.174987 CACCCACCCTGGACACCA 61.175 66.667 0.00 0.00 40.96 4.17
6442 7253 2.124085 CCTGGACACCACCCCCTA 59.876 66.667 0.00 0.00 0.00 3.53
6444 7255 1.537889 CTGGACACCACCCCCTACA 60.538 63.158 0.00 0.00 0.00 2.74
6450 7261 1.281419 CACCACCCCCTACACATACA 58.719 55.000 0.00 0.00 0.00 2.29
6455 7266 3.181458 CCACCCCCTACACATACACATAC 60.181 52.174 0.00 0.00 0.00 2.39
6930 8057 2.314549 AGGAGGGGCAAATGGTAATCAA 59.685 45.455 0.00 0.00 0.00 2.57
6966 8120 6.348498 ACTACATTATCAAGCACATGCACTA 58.652 36.000 6.64 0.00 45.16 2.74
6978 8134 6.064060 AGCACATGCACTAACATACCATTAT 58.936 36.000 6.64 0.00 45.16 1.28
7003 8159 6.919721 TCTGGTCACAAAGCATAATTTAACC 58.080 36.000 0.00 0.00 34.21 2.85
7100 8328 4.745125 GCAATGCTTGATCTCCAATTCATG 59.255 41.667 0.00 0.00 33.68 3.07
7101 8329 5.681437 GCAATGCTTGATCTCCAATTCATGT 60.681 40.000 0.00 0.00 33.68 3.21
7104 8332 8.789762 CAATGCTTGATCTCCAATTCATGTATA 58.210 33.333 0.00 0.00 33.68 1.47
7110 8338 8.969260 TGATCTCCAATTCATGTATATATGCC 57.031 34.615 4.66 0.00 0.00 4.40
7111 8339 8.775151 TGATCTCCAATTCATGTATATATGCCT 58.225 33.333 4.66 0.00 0.00 4.75
7130 8358 9.912634 ATATGCCTATAATTATGCACAACAAAC 57.087 29.630 11.47 0.00 32.73 2.93
7131 8359 6.568869 TGCCTATAATTATGCACAACAAACC 58.431 36.000 8.28 0.00 0.00 3.27
7132 8360 6.153510 TGCCTATAATTATGCACAACAAACCA 59.846 34.615 8.28 0.00 0.00 3.67
7133 8361 7.038659 GCCTATAATTATGCACAACAAACCAA 58.961 34.615 8.28 0.00 0.00 3.67
7134 8362 7.710475 GCCTATAATTATGCACAACAAACCAAT 59.290 33.333 8.28 0.00 0.00 3.16
7140 8368 7.881643 TTATGCACAACAAACCAATTACATC 57.118 32.000 0.00 0.00 0.00 3.06
7261 8489 9.817809 TGAAGCACTTATTTAATACTACCTCTG 57.182 33.333 0.00 0.00 0.00 3.35
7262 8490 9.819267 GAAGCACTTATTTAATACTACCTCTGT 57.181 33.333 0.00 0.00 0.00 3.41
7299 8527 8.827177 AGACGTTTTAGACTTTCATACATTCA 57.173 30.769 0.00 0.00 0.00 2.57
7300 8528 9.268268 AGACGTTTTAGACTTTCATACATTCAA 57.732 29.630 0.00 0.00 0.00 2.69
7301 8529 9.872757 GACGTTTTAGACTTTCATACATTCAAA 57.127 29.630 0.00 0.00 0.00 2.69
7306 8534 9.677567 TTTAGACTTTCATACATTCAAAACAGC 57.322 29.630 0.00 0.00 0.00 4.40
7307 8535 7.275888 AGACTTTCATACATTCAAAACAGCA 57.724 32.000 0.00 0.00 0.00 4.41
7308 8536 7.889469 AGACTTTCATACATTCAAAACAGCAT 58.111 30.769 0.00 0.00 0.00 3.79
7309 8537 9.013229 AGACTTTCATACATTCAAAACAGCATA 57.987 29.630 0.00 0.00 0.00 3.14
7310 8538 9.624697 GACTTTCATACATTCAAAACAGCATAA 57.375 29.630 0.00 0.00 0.00 1.90
7311 8539 9.979578 ACTTTCATACATTCAAAACAGCATAAA 57.020 25.926 0.00 0.00 0.00 1.40
7313 8541 8.464770 TTCATACATTCAAAACAGCATAAAGC 57.535 30.769 0.00 0.00 46.19 3.51
7327 8555 3.908382 GCATAAAGCAAGTTGTCTGAACG 59.092 43.478 4.48 0.00 44.79 3.95
7328 8556 4.554723 GCATAAAGCAAGTTGTCTGAACGT 60.555 41.667 4.48 0.00 44.79 3.99
7329 8557 3.675467 AAAGCAAGTTGTCTGAACGTC 57.325 42.857 4.48 0.00 0.00 4.34
7330 8558 2.604046 AGCAAGTTGTCTGAACGTCT 57.396 45.000 4.48 0.00 0.00 4.18
7331 8559 2.906354 AGCAAGTTGTCTGAACGTCTT 58.094 42.857 4.48 0.00 0.00 3.01
7332 8560 4.054780 AGCAAGTTGTCTGAACGTCTTA 57.945 40.909 4.48 0.00 0.00 2.10
7333 8561 4.632153 AGCAAGTTGTCTGAACGTCTTAT 58.368 39.130 4.48 0.00 0.00 1.73
7334 8562 5.779922 AGCAAGTTGTCTGAACGTCTTATA 58.220 37.500 4.48 0.00 0.00 0.98
7335 8563 6.220930 AGCAAGTTGTCTGAACGTCTTATAA 58.779 36.000 4.48 0.00 0.00 0.98
7336 8564 6.704493 AGCAAGTTGTCTGAACGTCTTATAAA 59.296 34.615 4.48 0.00 0.00 1.40
7337 8565 7.225931 AGCAAGTTGTCTGAACGTCTTATAAAA 59.774 33.333 4.48 0.00 0.00 1.52
7338 8566 7.853929 GCAAGTTGTCTGAACGTCTTATAAAAA 59.146 33.333 4.48 0.00 0.00 1.94
7339 8567 9.878599 CAAGTTGTCTGAACGTCTTATAAAAAT 57.121 29.630 0.00 0.00 0.00 1.82
7345 8573 9.469239 GTCTGAACGTCTTATAAAAATAAACGG 57.531 33.333 0.00 0.00 33.26 4.44
7346 8574 9.421806 TCTGAACGTCTTATAAAAATAAACGGA 57.578 29.630 0.00 0.00 33.26 4.69
7347 8575 9.685005 CTGAACGTCTTATAAAAATAAACGGAG 57.315 33.333 0.00 0.00 33.26 4.63
7348 8576 8.658609 TGAACGTCTTATAAAAATAAACGGAGG 58.341 33.333 0.00 0.00 33.26 4.30
7349 8577 7.543947 ACGTCTTATAAAAATAAACGGAGGG 57.456 36.000 0.00 0.00 33.26 4.30
7350 8578 7.330262 ACGTCTTATAAAAATAAACGGAGGGA 58.670 34.615 0.00 0.00 33.26 4.20
7351 8579 7.493645 ACGTCTTATAAAAATAAACGGAGGGAG 59.506 37.037 0.00 0.00 33.26 4.30
7685 8915 4.904116 TGTTCTGACGTTGTGAATTGTTC 58.096 39.130 0.00 0.00 0.00 3.18
7747 8977 4.391405 AGATGTCGTGATTGATGCTACA 57.609 40.909 0.00 0.00 0.00 2.74
7814 9044 0.689055 TCATGCTCTCACACCTGCTT 59.311 50.000 0.00 0.00 0.00 3.91
7836 9066 5.418310 TCATCTTCTTGAACCAACGAAAC 57.582 39.130 0.00 0.00 0.00 2.78
7852 9083 4.004982 ACGAAACGGCAACCAATATACTT 58.995 39.130 0.00 0.00 0.00 2.24
7853 9084 4.142773 ACGAAACGGCAACCAATATACTTG 60.143 41.667 0.00 0.00 0.00 3.16
8002 9268 1.002251 CCCTCTCTATTCAGTCGCGTC 60.002 57.143 5.77 0.00 0.00 5.19
8012 9278 0.165295 CAGTCGCGTCGAGAGTGTAA 59.835 55.000 21.45 0.00 36.23 2.41
8275 9546 1.067364 TCAGCATGCAACCAGTTTGTG 59.933 47.619 21.98 5.14 37.54 3.33
8339 9615 4.819088 GCTTCCCAGGCTAGATAAAAGAAG 59.181 45.833 0.00 0.00 33.13 2.85
8346 9622 6.760770 CCAGGCTAGATAAAAGAAGAACAGAG 59.239 42.308 0.00 0.00 0.00 3.35
8418 9694 9.394767 TGCTGTAATAAATTGATGCTTTCTCTA 57.605 29.630 0.00 0.00 0.00 2.43
8434 9726 9.956720 TGCTTTCTCTATGAAAAGAAAAGAAAG 57.043 29.630 14.49 14.49 43.25 2.62
8453 9745 6.830912 AGAAAGGAAAAGAAATCCAAAAGGG 58.169 36.000 0.00 0.00 39.55 3.95
8471 9763 3.500343 AGGGAAGAAAATGTCCAGTTGG 58.500 45.455 0.00 0.00 35.44 3.77
8474 9766 3.552890 GGAAGAAAATGTCCAGTTGGTGC 60.553 47.826 0.00 0.00 36.34 5.01
8475 9767 2.665165 AGAAAATGTCCAGTTGGTGCA 58.335 42.857 0.00 0.00 36.34 4.57
8484 9783 4.343526 TGTCCAGTTGGTGCAATACATTTT 59.656 37.500 0.00 0.00 36.34 1.82
8503 9802 3.405823 TTGTGTGACATCTCAGATGCA 57.594 42.857 15.07 10.72 0.00 3.96
8504 9803 3.622166 TGTGTGACATCTCAGATGCAT 57.378 42.857 15.07 0.00 0.00 3.96
8505 9804 3.267483 TGTGTGACATCTCAGATGCATG 58.733 45.455 15.07 0.00 0.00 4.06
8506 9805 2.031807 GTGTGACATCTCAGATGCATGC 59.968 50.000 15.07 11.82 0.00 4.06
8507 9806 2.093128 TGTGACATCTCAGATGCATGCT 60.093 45.455 20.33 4.11 0.00 3.79
8508 9807 2.288186 GTGACATCTCAGATGCATGCTG 59.712 50.000 20.33 11.66 34.71 4.41
8509 9808 2.169769 TGACATCTCAGATGCATGCTGA 59.830 45.455 20.33 20.49 39.90 4.26
8515 9814 3.180891 TCAGATGCATGCTGAGAAGAG 57.819 47.619 20.33 1.02 37.46 2.85
8516 9815 2.500504 TCAGATGCATGCTGAGAAGAGT 59.499 45.455 20.33 0.00 37.46 3.24
8517 9816 3.055312 TCAGATGCATGCTGAGAAGAGTT 60.055 43.478 20.33 0.00 37.46 3.01
8518 9817 3.690139 CAGATGCATGCTGAGAAGAGTTT 59.310 43.478 20.33 0.00 35.39 2.66
8519 9818 4.874396 CAGATGCATGCTGAGAAGAGTTTA 59.126 41.667 20.33 0.00 35.39 2.01
8520 9819 5.353400 CAGATGCATGCTGAGAAGAGTTTAA 59.647 40.000 20.33 0.00 35.39 1.52
8554 9853 7.044181 TGATTAATCTTCTCTGTTACTGCTGG 58.956 38.462 16.24 0.00 0.00 4.85
8559 9858 2.525368 TCTCTGTTACTGCTGGTGCTA 58.475 47.619 0.00 0.00 40.48 3.49
8561 9860 1.967779 TCTGTTACTGCTGGTGCTACA 59.032 47.619 0.00 0.00 40.48 2.74
8563 9862 2.932614 CTGTTACTGCTGGTGCTACATC 59.067 50.000 0.00 0.00 40.48 3.06
8564 9863 2.567169 TGTTACTGCTGGTGCTACATCT 59.433 45.455 0.00 0.00 40.48 2.90
8767 10068 1.335597 TGAACCGTAACGTCTCTGCTG 60.336 52.381 0.00 0.00 0.00 4.41
8769 10070 1.213013 CCGTAACGTCTCTGCTGCT 59.787 57.895 0.00 0.00 0.00 4.24
8770 10071 0.388649 CCGTAACGTCTCTGCTGCTT 60.389 55.000 0.00 0.00 0.00 3.91
8771 10072 0.710567 CGTAACGTCTCTGCTGCTTG 59.289 55.000 0.00 0.00 0.00 4.01
8829 10135 3.934684 GCTCGCCATTGCTCGCTC 61.935 66.667 0.00 0.00 34.43 5.03
8915 10221 4.234574 CAGGATTTTAAAAAGTGGGCGAC 58.765 43.478 4.44 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.369904 GCATGGATATGTTTTGACAAACTATTT 57.630 29.630 0.00 0.00 42.61 1.40
5 6 7.701924 CGCATGGATATGTTTTGACAAACTATT 59.298 33.333 0.00 0.00 42.61 1.73
6 7 7.195646 CGCATGGATATGTTTTGACAAACTAT 58.804 34.615 0.00 1.13 42.61 2.12
7 8 6.404184 CCGCATGGATATGTTTTGACAAACTA 60.404 38.462 0.00 0.00 39.55 2.24
8 9 5.401550 CGCATGGATATGTTTTGACAAACT 58.598 37.500 0.00 0.00 42.61 2.66
9 10 4.562394 CCGCATGGATATGTTTTGACAAAC 59.438 41.667 0.00 0.00 39.39 2.93
10 11 4.381398 CCCGCATGGATATGTTTTGACAAA 60.381 41.667 0.00 0.00 37.49 2.83
11 12 3.130164 CCCGCATGGATATGTTTTGACAA 59.870 43.478 0.00 0.00 37.49 3.18
12 13 2.687425 CCCGCATGGATATGTTTTGACA 59.313 45.455 0.00 0.00 37.49 3.58
13 14 2.948979 TCCCGCATGGATATGTTTTGAC 59.051 45.455 0.00 0.00 38.61 3.18
14 15 3.289407 TCCCGCATGGATATGTTTTGA 57.711 42.857 0.00 0.00 38.61 2.69
25 26 1.068588 TCGAAACTAGATCCCGCATGG 59.931 52.381 0.00 0.00 0.00 3.66
26 27 2.509052 TCGAAACTAGATCCCGCATG 57.491 50.000 0.00 0.00 0.00 4.06
27 28 2.693591 TCTTCGAAACTAGATCCCGCAT 59.306 45.455 0.00 0.00 0.00 4.73
28 29 2.097036 TCTTCGAAACTAGATCCCGCA 58.903 47.619 0.00 0.00 0.00 5.69
29 30 2.733517 CTCTTCGAAACTAGATCCCGC 58.266 52.381 0.00 0.00 0.00 6.13
30 31 2.099263 TGCTCTTCGAAACTAGATCCCG 59.901 50.000 0.00 0.00 0.00 5.14
31 32 3.119101 TGTGCTCTTCGAAACTAGATCCC 60.119 47.826 0.00 0.00 0.00 3.85
32 33 4.111375 TGTGCTCTTCGAAACTAGATCC 57.889 45.455 0.00 0.00 0.00 3.36
33 34 4.439449 CGATGTGCTCTTCGAAACTAGATC 59.561 45.833 16.38 0.00 41.60 2.75
34 35 4.355437 CGATGTGCTCTTCGAAACTAGAT 58.645 43.478 16.38 0.00 41.60 1.98
35 36 3.759418 CGATGTGCTCTTCGAAACTAGA 58.241 45.455 16.38 0.00 41.60 2.43
36 37 2.280183 GCGATGTGCTCTTCGAAACTAG 59.720 50.000 23.17 0.00 41.60 2.57
37 38 2.259618 GCGATGTGCTCTTCGAAACTA 58.740 47.619 23.17 0.00 41.60 2.24
38 39 1.071605 GCGATGTGCTCTTCGAAACT 58.928 50.000 23.17 0.00 41.60 2.66
39 40 0.246912 CGCGATGTGCTCTTCGAAAC 60.247 55.000 23.17 8.54 41.60 2.78
40 41 0.388006 TCGCGATGTGCTCTTCGAAA 60.388 50.000 23.17 10.27 41.60 3.46
41 42 0.179137 ATCGCGATGTGCTCTTCGAA 60.179 50.000 23.04 12.88 41.60 3.71
42 43 0.867329 CATCGCGATGTGCTCTTCGA 60.867 55.000 35.19 10.30 41.60 3.71
43 44 0.867329 TCATCGCGATGTGCTCTTCG 60.867 55.000 39.38 18.04 43.27 3.79
44 45 1.495878 ATCATCGCGATGTGCTCTTC 58.504 50.000 39.38 0.00 43.27 2.87
45 46 1.945387 AATCATCGCGATGTGCTCTT 58.055 45.000 39.38 25.02 43.27 2.85
46 47 1.863454 GAAATCATCGCGATGTGCTCT 59.137 47.619 39.38 24.13 43.27 4.09
47 48 1.594397 TGAAATCATCGCGATGTGCTC 59.406 47.619 39.38 31.63 43.27 4.26
48 49 1.596260 CTGAAATCATCGCGATGTGCT 59.404 47.619 39.38 27.17 43.27 4.40
49 50 1.918974 GCTGAAATCATCGCGATGTGC 60.919 52.381 39.38 29.25 39.72 4.57
50 51 1.655600 CGCTGAAATCATCGCGATGTG 60.656 52.381 39.38 23.89 46.52 3.21
51 52 0.578683 CGCTGAAATCATCGCGATGT 59.421 50.000 39.38 27.20 46.52 3.06
52 53 0.110956 CCGCTGAAATCATCGCGATG 60.111 55.000 37.19 37.19 46.52 3.84
53 54 0.530650 ACCGCTGAAATCATCGCGAT 60.531 50.000 17.62 17.62 46.52 4.58
54 55 1.153647 ACCGCTGAAATCATCGCGA 60.154 52.632 13.09 13.09 46.52 5.87
55 56 1.011904 CACCGCTGAAATCATCGCG 60.012 57.895 0.00 0.00 44.69 5.87
56 57 0.726827 TTCACCGCTGAAATCATCGC 59.273 50.000 1.36 0.00 33.20 4.58
57 58 2.416547 ACTTTCACCGCTGAAATCATCG 59.583 45.455 6.36 0.00 43.89 3.84
58 59 3.426695 CCACTTTCACCGCTGAAATCATC 60.427 47.826 6.36 0.00 43.89 2.92
59 60 2.489329 CCACTTTCACCGCTGAAATCAT 59.511 45.455 6.36 0.00 43.89 2.45
60 61 1.879380 CCACTTTCACCGCTGAAATCA 59.121 47.619 6.36 0.00 43.89 2.57
61 62 2.151202 TCCACTTTCACCGCTGAAATC 58.849 47.619 6.36 0.00 43.89 2.17
62 63 2.270352 TCCACTTTCACCGCTGAAAT 57.730 45.000 6.36 0.00 43.89 2.17
63 64 2.151202 GATCCACTTTCACCGCTGAAA 58.849 47.619 5.80 5.80 42.93 2.69
64 65 1.347707 AGATCCACTTTCACCGCTGAA 59.652 47.619 0.00 0.00 34.39 3.02
65 66 0.976641 AGATCCACTTTCACCGCTGA 59.023 50.000 0.00 0.00 0.00 4.26
66 67 1.813513 AAGATCCACTTTCACCGCTG 58.186 50.000 0.00 0.00 34.94 5.18
67 68 3.695830 TTAAGATCCACTTTCACCGCT 57.304 42.857 0.00 0.00 39.72 5.52
68 69 4.965119 AATTAAGATCCACTTTCACCGC 57.035 40.909 0.00 0.00 39.72 5.68
69 70 6.908825 TCAAAATTAAGATCCACTTTCACCG 58.091 36.000 0.00 0.00 39.72 4.94
70 71 8.306761 ACATCAAAATTAAGATCCACTTTCACC 58.693 33.333 0.00 0.00 39.72 4.02
71 72 9.696917 AACATCAAAATTAAGATCCACTTTCAC 57.303 29.630 0.00 0.00 39.72 3.18
74 75 9.492973 CCAAACATCAAAATTAAGATCCACTTT 57.507 29.630 0.00 0.00 39.72 2.66
75 76 8.650490 ACCAAACATCAAAATTAAGATCCACTT 58.350 29.630 0.00 0.00 42.04 3.16
76 77 8.193953 ACCAAACATCAAAATTAAGATCCACT 57.806 30.769 0.00 0.00 0.00 4.00
77 78 8.831715 AACCAAACATCAAAATTAAGATCCAC 57.168 30.769 0.00 0.00 0.00 4.02
89 90 9.892130 ACCATAACTTTTAAACCAAACATCAAA 57.108 25.926 0.00 0.00 0.00 2.69
90 91 9.892130 AACCATAACTTTTAAACCAAACATCAA 57.108 25.926 0.00 0.00 0.00 2.57
91 92 9.892130 AAACCATAACTTTTAAACCAAACATCA 57.108 25.926 0.00 0.00 0.00 3.07
127 128 9.413048 TCGTCTAGTTTGTTTTTCAATTTTTGT 57.587 25.926 0.00 0.00 35.84 2.83
130 131 9.796120 TGATCGTCTAGTTTGTTTTTCAATTTT 57.204 25.926 0.00 0.00 35.84 1.82
131 132 9.796120 TTGATCGTCTAGTTTGTTTTTCAATTT 57.204 25.926 0.00 0.00 35.84 1.82
132 133 9.233232 GTTGATCGTCTAGTTTGTTTTTCAATT 57.767 29.630 0.00 0.00 35.84 2.32
133 134 8.621286 AGTTGATCGTCTAGTTTGTTTTTCAAT 58.379 29.630 0.00 0.00 35.84 2.57
134 135 7.981142 AGTTGATCGTCTAGTTTGTTTTTCAA 58.019 30.769 0.00 0.00 0.00 2.69
135 136 7.548196 AGTTGATCGTCTAGTTTGTTTTTCA 57.452 32.000 0.00 0.00 0.00 2.69
136 137 7.586664 GGAAGTTGATCGTCTAGTTTGTTTTTC 59.413 37.037 0.00 0.00 0.00 2.29
137 138 7.282450 AGGAAGTTGATCGTCTAGTTTGTTTTT 59.718 33.333 0.00 0.00 0.00 1.94
138 139 6.766467 AGGAAGTTGATCGTCTAGTTTGTTTT 59.234 34.615 0.00 0.00 0.00 2.43
139 140 6.289064 AGGAAGTTGATCGTCTAGTTTGTTT 58.711 36.000 0.00 0.00 0.00 2.83
140 141 5.855045 AGGAAGTTGATCGTCTAGTTTGTT 58.145 37.500 0.00 0.00 0.00 2.83
141 142 5.470047 AGGAAGTTGATCGTCTAGTTTGT 57.530 39.130 0.00 0.00 0.00 2.83
142 143 6.787085 AAAGGAAGTTGATCGTCTAGTTTG 57.213 37.500 0.00 0.00 0.00 2.93
143 144 6.766467 ACAAAAGGAAGTTGATCGTCTAGTTT 59.234 34.615 0.00 0.00 0.00 2.66
144 145 6.202954 CACAAAAGGAAGTTGATCGTCTAGTT 59.797 38.462 0.00 0.00 0.00 2.24
145 146 5.696724 CACAAAAGGAAGTTGATCGTCTAGT 59.303 40.000 0.00 0.00 0.00 2.57
146 147 5.696724 ACACAAAAGGAAGTTGATCGTCTAG 59.303 40.000 0.00 0.00 0.00 2.43
147 148 5.607477 ACACAAAAGGAAGTTGATCGTCTA 58.393 37.500 0.00 0.00 0.00 2.59
148 149 4.451900 ACACAAAAGGAAGTTGATCGTCT 58.548 39.130 0.00 0.00 0.00 4.18
149 150 4.813296 ACACAAAAGGAAGTTGATCGTC 57.187 40.909 0.00 0.00 0.00 4.20
150 151 5.120399 TGTACACAAAAGGAAGTTGATCGT 58.880 37.500 0.00 0.00 0.00 3.73
151 152 5.666969 TGTACACAAAAGGAAGTTGATCG 57.333 39.130 0.00 0.00 0.00 3.69
152 153 5.907391 CGTTGTACACAAAAGGAAGTTGATC 59.093 40.000 0.00 0.00 37.63 2.92
153 154 5.220970 CCGTTGTACACAAAAGGAAGTTGAT 60.221 40.000 10.64 0.00 37.81 2.57
154 155 4.095185 CCGTTGTACACAAAAGGAAGTTGA 59.905 41.667 10.64 0.00 37.81 3.18
155 156 4.095185 TCCGTTGTACACAAAAGGAAGTTG 59.905 41.667 14.50 0.00 39.95 3.16
156 157 4.095334 GTCCGTTGTACACAAAAGGAAGTT 59.905 41.667 17.08 0.00 42.45 2.66
157 158 3.624410 GTCCGTTGTACACAAAAGGAAGT 59.376 43.478 17.08 0.00 42.45 3.01
158 159 3.623960 TGTCCGTTGTACACAAAAGGAAG 59.376 43.478 17.08 0.00 42.45 3.46
159 160 3.607741 TGTCCGTTGTACACAAAAGGAA 58.392 40.909 17.08 8.95 42.45 3.36
160 161 3.263489 TGTCCGTTGTACACAAAAGGA 57.737 42.857 13.43 13.43 40.32 3.36
161 162 3.314080 ACATGTCCGTTGTACACAAAAGG 59.686 43.478 0.00 10.11 37.63 3.11
162 163 4.545823 ACATGTCCGTTGTACACAAAAG 57.454 40.909 0.00 0.00 37.63 2.27
163 164 6.621316 AATACATGTCCGTTGTACACAAAA 57.379 33.333 0.00 0.00 37.63 2.44
164 165 6.431278 CAAATACATGTCCGTTGTACACAAA 58.569 36.000 0.00 0.00 37.63 2.83
165 166 5.561145 GCAAATACATGTCCGTTGTACACAA 60.561 40.000 0.00 0.00 32.70 3.33
166 167 4.083749 GCAAATACATGTCCGTTGTACACA 60.084 41.667 0.00 0.00 32.70 3.72
167 168 4.399978 GCAAATACATGTCCGTTGTACAC 58.600 43.478 0.00 0.00 32.70 2.90
168 169 3.437395 GGCAAATACATGTCCGTTGTACA 59.563 43.478 0.00 0.00 32.70 2.90
169 170 3.687698 AGGCAAATACATGTCCGTTGTAC 59.312 43.478 0.00 3.69 32.70 2.90
170 171 3.945346 AGGCAAATACATGTCCGTTGTA 58.055 40.909 0.00 0.00 34.29 2.41
171 172 2.790433 AGGCAAATACATGTCCGTTGT 58.210 42.857 0.00 0.00 0.00 3.32
172 173 3.848272 AAGGCAAATACATGTCCGTTG 57.152 42.857 0.00 6.66 0.00 4.10
173 174 4.321675 GGAAAAGGCAAATACATGTCCGTT 60.322 41.667 0.00 0.00 0.00 4.44
174 175 3.192633 GGAAAAGGCAAATACATGTCCGT 59.807 43.478 0.00 0.00 0.00 4.69
175 176 3.192422 TGGAAAAGGCAAATACATGTCCG 59.808 43.478 0.00 0.00 0.00 4.79
176 177 4.220602 AGTGGAAAAGGCAAATACATGTCC 59.779 41.667 0.00 0.00 0.00 4.02
177 178 5.391312 AGTGGAAAAGGCAAATACATGTC 57.609 39.130 0.00 0.00 0.00 3.06
178 179 4.220602 GGAGTGGAAAAGGCAAATACATGT 59.779 41.667 2.69 2.69 0.00 3.21
179 180 4.675146 CGGAGTGGAAAAGGCAAATACATG 60.675 45.833 0.00 0.00 0.00 3.21
180 181 3.443681 CGGAGTGGAAAAGGCAAATACAT 59.556 43.478 0.00 0.00 0.00 2.29
181 182 2.817258 CGGAGTGGAAAAGGCAAATACA 59.183 45.455 0.00 0.00 0.00 2.29
182 183 3.078837 TCGGAGTGGAAAAGGCAAATAC 58.921 45.455 0.00 0.00 0.00 1.89
183 184 3.426787 TCGGAGTGGAAAAGGCAAATA 57.573 42.857 0.00 0.00 0.00 1.40
184 185 2.286365 TCGGAGTGGAAAAGGCAAAT 57.714 45.000 0.00 0.00 0.00 2.32
185 186 1.953686 CTTCGGAGTGGAAAAGGCAAA 59.046 47.619 0.00 0.00 0.00 3.68
186 187 1.604604 CTTCGGAGTGGAAAAGGCAA 58.395 50.000 0.00 0.00 0.00 4.52
187 188 0.889186 GCTTCGGAGTGGAAAAGGCA 60.889 55.000 0.00 0.00 0.00 4.75
188 189 0.606673 AGCTTCGGAGTGGAAAAGGC 60.607 55.000 0.00 0.00 0.00 4.35
189 190 1.002544 AGAGCTTCGGAGTGGAAAAGG 59.997 52.381 0.00 0.00 0.00 3.11
190 191 2.464157 AGAGCTTCGGAGTGGAAAAG 57.536 50.000 0.00 0.00 0.00 2.27
191 192 2.550208 GGAAGAGCTTCGGAGTGGAAAA 60.550 50.000 4.32 0.00 40.37 2.29
192 193 1.002087 GGAAGAGCTTCGGAGTGGAAA 59.998 52.381 4.32 0.00 40.37 3.13
193 194 0.608640 GGAAGAGCTTCGGAGTGGAA 59.391 55.000 4.32 0.00 40.37 3.53
194 195 0.251832 AGGAAGAGCTTCGGAGTGGA 60.252 55.000 4.32 0.00 40.37 4.02
195 196 0.108424 CAGGAAGAGCTTCGGAGTGG 60.108 60.000 4.32 0.00 40.37 4.00
196 197 0.108424 CCAGGAAGAGCTTCGGAGTG 60.108 60.000 4.32 0.43 40.37 3.51
197 198 1.893919 GCCAGGAAGAGCTTCGGAGT 61.894 60.000 7.94 0.00 40.37 3.85
198 199 1.153469 GCCAGGAAGAGCTTCGGAG 60.153 63.158 7.94 0.00 40.37 4.63
199 200 2.982130 GCCAGGAAGAGCTTCGGA 59.018 61.111 7.94 0.00 40.37 4.55
200 201 2.510238 CGCCAGGAAGAGCTTCGG 60.510 66.667 4.32 2.66 40.37 4.30
201 202 3.191539 GCGCCAGGAAGAGCTTCG 61.192 66.667 0.00 0.00 40.37 3.79
202 203 2.821810 GGCGCCAGGAAGAGCTTC 60.822 66.667 24.80 1.62 38.80 3.86
203 204 4.416738 GGGCGCCAGGAAGAGCTT 62.417 66.667 30.85 0.00 0.00 3.74
206 207 1.690219 ATAGTGGGCGCCAGGAAGAG 61.690 60.000 30.85 0.00 32.34 2.85
207 208 0.397957 TATAGTGGGCGCCAGGAAGA 60.398 55.000 30.85 8.21 32.34 2.87
208 209 0.249911 GTATAGTGGGCGCCAGGAAG 60.250 60.000 30.85 0.00 32.34 3.46
209 210 1.827394 GTATAGTGGGCGCCAGGAA 59.173 57.895 30.85 11.30 32.34 3.36
210 211 2.495409 CGTATAGTGGGCGCCAGGA 61.495 63.158 30.85 10.68 32.34 3.86
211 212 2.029073 CGTATAGTGGGCGCCAGG 59.971 66.667 30.85 8.25 32.34 4.45
212 213 2.029073 CCGTATAGTGGGCGCCAG 59.971 66.667 30.85 8.02 32.34 4.85
213 214 3.542676 CCCGTATAGTGGGCGCCA 61.543 66.667 30.85 12.04 40.47 5.69
219 220 3.622166 AACAAAGGACCCGTATAGTGG 57.378 47.619 0.00 0.00 0.00 4.00
220 221 5.952526 AAAAACAAAGGACCCGTATAGTG 57.047 39.130 0.00 0.00 0.00 2.74
252 253 6.086222 CGTTGTCGAAATGATCCATCTTTTT 58.914 36.000 0.00 0.00 39.71 1.94
253 254 5.391950 CCGTTGTCGAAATGATCCATCTTTT 60.392 40.000 0.00 1.15 39.71 2.27
254 255 4.094887 CCGTTGTCGAAATGATCCATCTTT 59.905 41.667 0.00 0.00 39.71 2.52
255 256 3.623060 CCGTTGTCGAAATGATCCATCTT 59.377 43.478 0.00 0.00 39.71 2.40
256 257 3.198068 CCGTTGTCGAAATGATCCATCT 58.802 45.455 0.00 0.00 39.71 2.90
257 258 2.286418 GCCGTTGTCGAAATGATCCATC 60.286 50.000 0.00 0.00 39.71 3.51
258 259 1.670811 GCCGTTGTCGAAATGATCCAT 59.329 47.619 0.00 0.00 39.71 3.41
259 260 1.083489 GCCGTTGTCGAAATGATCCA 58.917 50.000 0.00 0.00 39.71 3.41
260 261 0.026285 CGCCGTTGTCGAAATGATCC 59.974 55.000 0.00 0.00 39.71 3.36
355 356 0.179137 TAACCGCAGATGACGCAGAG 60.179 55.000 0.00 0.00 0.00 3.35
357 358 1.421410 GGTAACCGCAGATGACGCAG 61.421 60.000 0.00 0.00 0.00 5.18
373 374 2.821366 GTCCGCGAGACTCCGGTA 60.821 66.667 23.30 12.86 44.63 4.02
445 459 2.365586 CCCTCCTCTCTGTGCCAGG 61.366 68.421 2.86 0.00 31.51 4.45
447 461 3.005539 GCCCTCCTCTCTGTGCCA 61.006 66.667 0.00 0.00 0.00 4.92
473 491 1.007387 CCTTTTGTTGCTCGGGTGC 60.007 57.895 0.00 0.00 0.00 5.01
474 492 1.007387 GCCTTTTGTTGCTCGGGTG 60.007 57.895 0.00 0.00 0.00 4.61
476 494 2.650778 GGCCTTTTGTTGCTCGGG 59.349 61.111 0.00 0.00 0.00 5.14
605 657 1.155390 TGAGGTGGGGAAGACGACT 59.845 57.895 0.00 0.00 0.00 4.18
627 685 1.304936 TAGGAAGAGGGGAGGAGGGG 61.305 65.000 0.00 0.00 0.00 4.79
631 689 0.637195 CCAGTAGGAAGAGGGGAGGA 59.363 60.000 0.00 0.00 36.89 3.71
653 715 1.978617 GTCGGGGTCGGAACCTGTA 60.979 63.158 20.10 4.99 45.66 2.74
690 760 2.469826 GGCTTGGGTTTTGAACGAAAG 58.530 47.619 0.00 0.00 0.00 2.62
695 765 0.874175 GTGCGGCTTGGGTTTTGAAC 60.874 55.000 0.00 0.00 0.00 3.18
721 796 3.809013 CCGAGGGATTGGGTGGGG 61.809 72.222 0.00 0.00 0.00 4.96
817 899 1.421646 GTCCGAGATGGGGATGGATTT 59.578 52.381 0.00 0.00 38.76 2.17
854 938 0.981277 GACGGAGAAGGGGGATTGGA 60.981 60.000 0.00 0.00 0.00 3.53
857 941 0.253207 AAGGACGGAGAAGGGGGATT 60.253 55.000 0.00 0.00 0.00 3.01
858 942 0.640495 TAAGGACGGAGAAGGGGGAT 59.360 55.000 0.00 0.00 0.00 3.85
859 943 0.414629 TTAAGGACGGAGAAGGGGGA 59.585 55.000 0.00 0.00 0.00 4.81
860 944 1.282382 TTTAAGGACGGAGAAGGGGG 58.718 55.000 0.00 0.00 0.00 5.40
865 949 4.404715 CAGTAGGGATTTAAGGACGGAGAA 59.595 45.833 0.00 0.00 0.00 2.87
866 950 3.958798 CAGTAGGGATTTAAGGACGGAGA 59.041 47.826 0.00 0.00 0.00 3.71
867 951 3.492829 GCAGTAGGGATTTAAGGACGGAG 60.493 52.174 0.00 0.00 0.00 4.63
868 952 2.433239 GCAGTAGGGATTTAAGGACGGA 59.567 50.000 0.00 0.00 0.00 4.69
869 953 2.434702 AGCAGTAGGGATTTAAGGACGG 59.565 50.000 0.00 0.00 0.00 4.79
872 956 2.102588 GCGAGCAGTAGGGATTTAAGGA 59.897 50.000 0.00 0.00 0.00 3.36
1374 1461 3.659334 ACGGAAGTGACGACGCTA 58.341 55.556 0.49 0.00 46.97 4.26
1476 1563 4.883354 CCCTCCGGGCCAGCATTC 62.883 72.222 4.39 0.00 35.35 2.67
1501 1588 1.971167 GCTTGCATTCCACCACCGA 60.971 57.895 0.00 0.00 0.00 4.69
1512 1599 1.255667 CCTCCTGCTTTGGCTTGCAT 61.256 55.000 0.00 0.00 38.59 3.96
1605 1692 2.358737 CACGCGGGGCTCTTCTTT 60.359 61.111 12.47 0.00 0.00 2.52
1692 1779 0.994995 CGAAGAACATGACGCAGAGG 59.005 55.000 0.00 0.00 0.00 3.69
1775 1866 3.236896 ACTAACTCGACCAGGGAAAGAA 58.763 45.455 0.00 0.00 0.00 2.52
1802 1893 5.424252 AGAAAGGAGACGGTTGGTTCATATA 59.576 40.000 0.00 0.00 0.00 0.86
1803 1894 4.225267 AGAAAGGAGACGGTTGGTTCATAT 59.775 41.667 0.00 0.00 0.00 1.78
1814 1905 5.500645 AAAGAAAAACAGAAAGGAGACGG 57.499 39.130 0.00 0.00 0.00 4.79
1817 1908 5.650703 ACGGAAAAGAAAAACAGAAAGGAGA 59.349 36.000 0.00 0.00 0.00 3.71
1852 1943 7.612677 AGTCCTACATACAAAAGAATTCGACT 58.387 34.615 0.00 0.00 0.00 4.18
1862 1953 6.388689 ACCCATCCATAGTCCTACATACAAAA 59.611 38.462 0.00 0.00 0.00 2.44
1929 2020 1.280421 GCAGAGATTGTCCCTGGAACT 59.720 52.381 0.00 0.00 0.00 3.01
2182 2284 9.988815 CAATAAATGAGGTAGCTAGTACAAGAT 57.011 33.333 0.00 0.00 32.62 2.40
2183 2285 7.926555 GCAATAAATGAGGTAGCTAGTACAAGA 59.073 37.037 0.00 0.00 32.62 3.02
2184 2286 7.710907 TGCAATAAATGAGGTAGCTAGTACAAG 59.289 37.037 0.00 0.00 32.62 3.16
2185 2287 7.561251 TGCAATAAATGAGGTAGCTAGTACAA 58.439 34.615 0.00 0.00 32.62 2.41
2186 2288 7.119709 TGCAATAAATGAGGTAGCTAGTACA 57.880 36.000 0.00 0.00 32.62 2.90
2187 2289 8.608844 ATTGCAATAAATGAGGTAGCTAGTAC 57.391 34.615 11.02 0.00 0.00 2.73
2188 2290 9.273016 GAATTGCAATAAATGAGGTAGCTAGTA 57.727 33.333 13.39 0.00 0.00 1.82
2189 2291 7.229506 GGAATTGCAATAAATGAGGTAGCTAGT 59.770 37.037 13.39 0.00 0.00 2.57
2190 2292 7.308830 GGGAATTGCAATAAATGAGGTAGCTAG 60.309 40.741 13.39 0.00 0.00 3.42
2191 2293 6.490040 GGGAATTGCAATAAATGAGGTAGCTA 59.510 38.462 13.39 0.00 0.00 3.32
2192 2294 5.302823 GGGAATTGCAATAAATGAGGTAGCT 59.697 40.000 13.39 0.00 0.00 3.32
2193 2295 5.509670 GGGGAATTGCAATAAATGAGGTAGC 60.510 44.000 13.39 0.00 0.00 3.58
2194 2296 5.278463 CGGGGAATTGCAATAAATGAGGTAG 60.278 44.000 13.39 0.00 0.00 3.18
2195 2297 4.582656 CGGGGAATTGCAATAAATGAGGTA 59.417 41.667 13.39 0.00 0.00 3.08
2196 2298 3.384467 CGGGGAATTGCAATAAATGAGGT 59.616 43.478 13.39 0.00 0.00 3.85
2216 2318 1.257743 TTAGATAGCAGCCTAGCCGG 58.742 55.000 0.00 0.00 30.25 6.13
2238 2340 3.295973 ACCACCTGCAACACAGTAAATT 58.704 40.909 0.00 0.00 45.68 1.82
2580 2694 6.560253 TGCCTAAAACAATCAAGAGAAGAC 57.440 37.500 0.00 0.00 0.00 3.01
3073 3246 4.797471 TGTCAAATGCTTACATGTGCTTC 58.203 39.130 9.11 0.00 40.79 3.86
3381 3598 5.547181 AAGAACTAATGCGACCTAAAAGC 57.453 39.130 0.00 0.00 0.00 3.51
3408 3625 0.040204 AATCCTCAAAGGGGTGGCTG 59.960 55.000 0.00 0.00 35.59 4.85
3574 3791 7.422465 AATATCCTGCCAGCAAAAAGAATAA 57.578 32.000 0.00 0.00 0.00 1.40
4161 4395 7.680730 AGCAACTCTTCTTTCTTAATACCTGA 58.319 34.615 0.00 0.00 0.00 3.86
4218 4452 0.106268 AACCACACACAGCCCATGAA 60.106 50.000 0.00 0.00 0.00 2.57
4262 4496 5.521372 GCTGCAGATATTGGAAAAATCAACC 59.479 40.000 20.43 0.00 0.00 3.77
4752 4989 2.710902 GCGGAAACAATGAGGCCCC 61.711 63.158 0.00 0.00 0.00 5.80
4868 5105 3.311322 CAGTCAGGAACACGCTAAAAACA 59.689 43.478 0.00 0.00 0.00 2.83
4976 5739 5.293324 GCATGAGTGATCCGTAAACAACATA 59.707 40.000 0.00 0.00 0.00 2.29
5243 6006 6.006449 AGCAAAGAGTAAGGTGATTGAACAT 58.994 36.000 0.00 0.00 0.00 2.71
5282 6045 6.867816 TGATGCATGTCTGGAATTAACAAAAC 59.132 34.615 2.46 0.00 0.00 2.43
5283 6046 6.990798 TGATGCATGTCTGGAATTAACAAAA 58.009 32.000 2.46 0.00 0.00 2.44
5284 6047 6.587206 TGATGCATGTCTGGAATTAACAAA 57.413 33.333 2.46 0.00 0.00 2.83
5412 6175 3.383185 TCCACTACAAAAAGGTGGCAAAG 59.617 43.478 6.49 0.00 47.00 2.77
5569 6377 6.981722 AGTTGGTGCTAAAAACTTCCTAATG 58.018 36.000 0.00 0.00 29.98 1.90
5585 6393 8.179615 ACGTAGCTTAAATATAAAAGTTGGTGC 58.820 33.333 0.00 0.00 0.00 5.01
5956 6767 5.966742 AGCCAACTTAGAATTGTTCTTCC 57.033 39.130 0.00 0.00 41.14 3.46
6080 6891 3.244976 GTTCCAAAATCATGCCAGTTCG 58.755 45.455 0.00 0.00 0.00 3.95
6142 6953 7.768807 ATTAGTAACATTTACTGGTGGCAAA 57.231 32.000 8.55 0.00 0.00 3.68
6145 6956 7.852971 TGTATTAGTAACATTTACTGGTGGC 57.147 36.000 8.55 0.00 0.00 5.01
6279 7090 4.135747 AGCTAGTCTTGAAGGAGATTGC 57.864 45.455 0.00 0.00 0.00 3.56
6304 7115 0.400213 ACCTCCTGGTGATTTTCGCA 59.600 50.000 0.00 0.00 46.51 5.10
6435 7246 3.043418 GGTATGTGTATGTGTAGGGGGT 58.957 50.000 0.00 0.00 0.00 4.95
6763 7890 5.828299 AAGAACCACAATCGTTCAGAAAA 57.172 34.783 3.76 0.00 41.72 2.29
6776 7903 6.542370 GCTCATATAGCCTTTTAAGAACCACA 59.458 38.462 0.00 0.00 46.25 4.17
6930 8057 9.429359 GCTTGATAATGTAGTTACTATGAGCAT 57.571 33.333 0.00 0.00 0.00 3.79
6978 8134 7.375053 GGTTAAATTATGCTTTGTGACCAGAA 58.625 34.615 0.00 0.00 0.00 3.02
7107 8335 6.153510 TGGTTTGTTGTGCATAATTATAGGCA 59.846 34.615 0.00 6.41 45.74 4.75
7108 8336 6.568869 TGGTTTGTTGTGCATAATTATAGGC 58.431 36.000 0.00 0.00 39.23 3.93
7109 8337 9.598517 AATTGGTTTGTTGTGCATAATTATAGG 57.401 29.630 0.00 0.00 0.00 2.57
7112 8340 9.935241 TGTAATTGGTTTGTTGTGCATAATTAT 57.065 25.926 0.00 0.00 0.00 1.28
7114 8342 8.845413 ATGTAATTGGTTTGTTGTGCATAATT 57.155 26.923 0.00 0.00 0.00 1.40
7115 8343 7.548780 GGATGTAATTGGTTTGTTGTGCATAAT 59.451 33.333 0.00 0.00 0.00 1.28
7118 8346 5.221601 TGGATGTAATTGGTTTGTTGTGCAT 60.222 36.000 0.00 0.00 0.00 3.96
7123 8351 8.824159 TTAACATGGATGTAATTGGTTTGTTG 57.176 30.769 0.00 0.00 40.80 3.33
7126 8354 8.806634 CGATTTAACATGGATGTAATTGGTTTG 58.193 33.333 0.00 0.00 40.80 2.93
7127 8355 7.978975 CCGATTTAACATGGATGTAATTGGTTT 59.021 33.333 10.84 0.00 40.80 3.27
7130 8358 5.920273 GCCGATTTAACATGGATGTAATTGG 59.080 40.000 13.18 13.18 40.30 3.16
7131 8359 6.502652 TGCCGATTTAACATGGATGTAATTG 58.497 36.000 0.00 0.00 40.80 2.32
7132 8360 6.707440 TGCCGATTTAACATGGATGTAATT 57.293 33.333 0.00 0.00 40.80 1.40
7133 8361 5.278463 GCTGCCGATTTAACATGGATGTAAT 60.278 40.000 0.00 0.00 40.80 1.89
7134 8362 4.036262 GCTGCCGATTTAACATGGATGTAA 59.964 41.667 0.00 0.00 40.80 2.41
7140 8368 2.358582 TCATGCTGCCGATTTAACATGG 59.641 45.455 0.00 0.00 36.44 3.66
7273 8501 9.268268 TGAATGTATGAAAGTCTAAAACGTCTT 57.732 29.630 0.00 0.00 0.00 3.01
7274 8502 8.827177 TGAATGTATGAAAGTCTAAAACGTCT 57.173 30.769 0.00 0.00 0.00 4.18
7275 8503 9.872757 TTTGAATGTATGAAAGTCTAAAACGTC 57.127 29.630 0.00 0.00 0.00 4.34
7280 8508 9.677567 GCTGTTTTGAATGTATGAAAGTCTAAA 57.322 29.630 0.00 0.00 0.00 1.85
7281 8509 8.845227 TGCTGTTTTGAATGTATGAAAGTCTAA 58.155 29.630 0.00 0.00 0.00 2.10
7282 8510 8.389779 TGCTGTTTTGAATGTATGAAAGTCTA 57.610 30.769 0.00 0.00 0.00 2.59
7283 8511 7.275888 TGCTGTTTTGAATGTATGAAAGTCT 57.724 32.000 0.00 0.00 0.00 3.24
7284 8512 9.624697 TTATGCTGTTTTGAATGTATGAAAGTC 57.375 29.630 0.00 0.00 0.00 3.01
7285 8513 9.979578 TTTATGCTGTTTTGAATGTATGAAAGT 57.020 25.926 0.00 0.00 0.00 2.66
7287 8515 8.924691 GCTTTATGCTGTTTTGAATGTATGAAA 58.075 29.630 0.00 0.00 38.95 2.69
7288 8516 8.087136 TGCTTTATGCTGTTTTGAATGTATGAA 58.913 29.630 0.00 0.00 43.37 2.57
7289 8517 7.600960 TGCTTTATGCTGTTTTGAATGTATGA 58.399 30.769 0.00 0.00 43.37 2.15
7290 8518 7.815398 TGCTTTATGCTGTTTTGAATGTATG 57.185 32.000 0.00 0.00 43.37 2.39
7291 8519 8.090214 ACTTGCTTTATGCTGTTTTGAATGTAT 58.910 29.630 0.00 0.00 43.37 2.29
7292 8520 7.432869 ACTTGCTTTATGCTGTTTTGAATGTA 58.567 30.769 0.00 0.00 43.37 2.29
7293 8521 6.282930 ACTTGCTTTATGCTGTTTTGAATGT 58.717 32.000 0.00 0.00 43.37 2.71
7294 8522 6.774354 ACTTGCTTTATGCTGTTTTGAATG 57.226 33.333 0.00 0.00 43.37 2.67
7295 8523 6.762661 ACAACTTGCTTTATGCTGTTTTGAAT 59.237 30.769 0.00 0.00 43.37 2.57
7296 8524 6.105333 ACAACTTGCTTTATGCTGTTTTGAA 58.895 32.000 0.00 0.00 43.37 2.69
7297 8525 5.659463 ACAACTTGCTTTATGCTGTTTTGA 58.341 33.333 0.00 0.00 43.37 2.69
7298 8526 5.750067 AGACAACTTGCTTTATGCTGTTTTG 59.250 36.000 0.00 0.00 43.37 2.44
7299 8527 5.750067 CAGACAACTTGCTTTATGCTGTTTT 59.250 36.000 0.00 0.00 43.37 2.43
7300 8528 5.067674 TCAGACAACTTGCTTTATGCTGTTT 59.932 36.000 0.00 0.00 43.37 2.83
7301 8529 4.580167 TCAGACAACTTGCTTTATGCTGTT 59.420 37.500 0.00 0.00 43.37 3.16
7302 8530 4.136796 TCAGACAACTTGCTTTATGCTGT 58.863 39.130 0.00 0.00 43.37 4.40
7303 8531 4.754372 TCAGACAACTTGCTTTATGCTG 57.246 40.909 0.00 0.00 43.37 4.41
7304 8532 4.319766 CGTTCAGACAACTTGCTTTATGCT 60.320 41.667 0.00 0.00 43.37 3.79
7305 8533 3.908382 CGTTCAGACAACTTGCTTTATGC 59.092 43.478 0.00 0.00 43.25 3.14
7306 8534 5.050091 AGACGTTCAGACAACTTGCTTTATG 60.050 40.000 0.00 0.00 0.00 1.90
7307 8535 5.057149 AGACGTTCAGACAACTTGCTTTAT 58.943 37.500 0.00 0.00 0.00 1.40
7308 8536 4.439057 AGACGTTCAGACAACTTGCTTTA 58.561 39.130 0.00 0.00 0.00 1.85
7309 8537 3.270877 AGACGTTCAGACAACTTGCTTT 58.729 40.909 0.00 0.00 0.00 3.51
7310 8538 2.906354 AGACGTTCAGACAACTTGCTT 58.094 42.857 0.00 0.00 0.00 3.91
7311 8539 2.604046 AGACGTTCAGACAACTTGCT 57.396 45.000 0.00 0.00 0.00 3.91
7312 8540 4.992381 ATAAGACGTTCAGACAACTTGC 57.008 40.909 0.00 0.00 0.00 4.01
7313 8541 9.878599 ATTTTTATAAGACGTTCAGACAACTTG 57.121 29.630 0.00 0.00 0.00 3.16
7319 8547 9.469239 CCGTTTATTTTTATAAGACGTTCAGAC 57.531 33.333 0.00 0.00 0.00 3.51
7320 8548 9.421806 TCCGTTTATTTTTATAAGACGTTCAGA 57.578 29.630 0.00 0.00 0.00 3.27
7321 8549 9.685005 CTCCGTTTATTTTTATAAGACGTTCAG 57.315 33.333 0.00 0.00 0.00 3.02
7322 8550 8.658609 CCTCCGTTTATTTTTATAAGACGTTCA 58.341 33.333 0.00 0.00 0.00 3.18
7323 8551 8.118607 CCCTCCGTTTATTTTTATAAGACGTTC 58.881 37.037 0.00 0.00 0.00 3.95
7324 8552 7.823799 TCCCTCCGTTTATTTTTATAAGACGTT 59.176 33.333 0.00 0.00 0.00 3.99
7325 8553 7.330262 TCCCTCCGTTTATTTTTATAAGACGT 58.670 34.615 0.00 0.00 0.00 4.34
7326 8554 7.493645 ACTCCCTCCGTTTATTTTTATAAGACG 59.506 37.037 0.00 0.00 0.00 4.18
7327 8555 8.728337 ACTCCCTCCGTTTATTTTTATAAGAC 57.272 34.615 0.00 0.00 0.00 3.01
7328 8556 9.822185 GTACTCCCTCCGTTTATTTTTATAAGA 57.178 33.333 0.00 0.00 0.00 2.10
7329 8557 9.603921 TGTACTCCCTCCGTTTATTTTTATAAG 57.396 33.333 0.00 0.00 0.00 1.73
7331 8559 9.768662 GATGTACTCCCTCCGTTTATTTTTATA 57.231 33.333 0.00 0.00 0.00 0.98
7332 8560 7.718314 GGATGTACTCCCTCCGTTTATTTTTAT 59.282 37.037 0.00 0.00 38.19 1.40
7333 8561 7.049754 GGATGTACTCCCTCCGTTTATTTTTA 58.950 38.462 0.00 0.00 38.19 1.52
7334 8562 5.884232 GGATGTACTCCCTCCGTTTATTTTT 59.116 40.000 0.00 0.00 38.19 1.94
7335 8563 5.434408 GGATGTACTCCCTCCGTTTATTTT 58.566 41.667 0.00 0.00 38.19 1.82
7336 8564 5.032327 GGATGTACTCCCTCCGTTTATTT 57.968 43.478 0.00 0.00 38.19 1.40
7337 8565 4.684484 GGATGTACTCCCTCCGTTTATT 57.316 45.455 0.00 0.00 38.19 1.40
7348 8576 2.213499 CTCGCAAATGGGATGTACTCC 58.787 52.381 0.32 0.00 44.11 3.85
7349 8577 2.213499 CCTCGCAAATGGGATGTACTC 58.787 52.381 0.32 0.00 36.39 2.59
7350 8578 1.134098 CCCTCGCAAATGGGATGTACT 60.134 52.381 0.32 0.00 46.15 2.73
7351 8579 1.134220 TCCCTCGCAAATGGGATGTAC 60.134 52.381 0.32 0.00 46.69 2.90
7365 8593 5.874810 TGACAAATTAAGAACAGATCCCTCG 59.125 40.000 0.00 0.00 0.00 4.63
7548 8776 5.163693 ACCAGTTAAACCGTTCAAGTTGAAG 60.164 40.000 18.56 10.52 37.00 3.02
7652 8880 2.545526 ACGTCAGAACATCAAACTGCAG 59.454 45.455 13.48 13.48 0.00 4.41
7653 8881 2.560504 ACGTCAGAACATCAAACTGCA 58.439 42.857 0.00 0.00 0.00 4.41
7654 8882 3.242739 ACAACGTCAGAACATCAAACTGC 60.243 43.478 0.00 0.00 0.00 4.40
7655 8883 4.033932 TCACAACGTCAGAACATCAAACTG 59.966 41.667 0.00 0.00 0.00 3.16
7685 8915 1.005766 CAGCAGCACAAAACGCAAAAG 60.006 47.619 0.00 0.00 0.00 2.27
7747 8977 0.827368 GGGCGATGTTTCCTCTCTCT 59.173 55.000 0.00 0.00 0.00 3.10
7814 9044 4.025229 CGTTTCGTTGGTTCAAGAAGATGA 60.025 41.667 0.00 0.00 0.00 2.92
7852 9083 0.870735 CATGCACTGCAAACGCAACA 60.871 50.000 8.03 0.00 43.62 3.33
7853 9084 1.847975 CATGCACTGCAAACGCAAC 59.152 52.632 8.03 0.00 43.62 4.17
8002 9268 1.068472 AGGCTGTCGTTTACACTCTCG 60.068 52.381 0.00 0.00 33.45 4.04
8012 9278 1.893808 CTGGTTGCAGGCTGTCGTT 60.894 57.895 17.16 0.00 0.00 3.85
8019 9285 1.200948 GAAGATCAACTGGTTGCAGGC 59.799 52.381 8.43 0.00 40.24 4.85
8123 9389 3.072476 AGTTAGGAGCTTTACACAGGCAA 59.928 43.478 0.00 0.00 0.00 4.52
8339 9615 2.033141 TGCCTGCCAGCTCTGTTC 59.967 61.111 0.00 0.00 0.00 3.18
8434 9726 6.419484 TCTTCCCTTTTGGATTTCTTTTCC 57.581 37.500 0.00 0.00 44.66 3.13
8441 9733 6.101005 TGGACATTTTCTTCCCTTTTGGATTT 59.899 34.615 0.00 0.00 44.66 2.17
8453 9745 3.068024 TGCACCAACTGGACATTTTCTTC 59.932 43.478 1.86 0.00 38.94 2.87
8471 9763 6.151691 AGATGTCACACAAAATGTATTGCAC 58.848 36.000 0.00 0.00 40.64 4.57
8474 9766 7.809665 TCTGAGATGTCACACAAAATGTATTG 58.190 34.615 0.00 0.00 40.64 1.90
8475 9767 7.984422 TCTGAGATGTCACACAAAATGTATT 57.016 32.000 0.00 0.00 40.64 1.89
8484 9783 3.267483 CATGCATCTGAGATGTCACACA 58.733 45.455 22.23 12.28 0.00 3.72
8527 9826 9.107177 CAGCAGTAACAGAGAAGATTAATCAAT 57.893 33.333 17.56 5.89 0.00 2.57
8530 9829 7.010923 CACCAGCAGTAACAGAGAAGATTAATC 59.989 40.741 7.41 7.41 0.00 1.75
8554 9853 2.345641 CAGCACGTACAAGATGTAGCAC 59.654 50.000 0.00 0.00 32.84 4.40
8559 9858 3.494626 CAGAAACAGCACGTACAAGATGT 59.505 43.478 0.13 0.13 0.00 3.06
8561 9860 3.728845 ACAGAAACAGCACGTACAAGAT 58.271 40.909 0.00 0.00 0.00 2.40
8563 9862 3.944422 AACAGAAACAGCACGTACAAG 57.056 42.857 0.00 0.00 0.00 3.16
8564 9863 4.154375 TGAAAACAGAAACAGCACGTACAA 59.846 37.500 0.00 0.00 0.00 2.41
8695 9996 2.456119 CGGGTCGCTGACATTCTGC 61.456 63.158 10.14 0.00 37.88 4.26
8840 10146 4.899239 GGCCGGAGATGCTCGTGG 62.899 72.222 5.05 0.00 32.29 4.94
8893 10199 4.234574 GTCGCCCACTTTTTAAAATCCTG 58.765 43.478 0.55 0.00 0.00 3.86
8915 10221 1.840741 CGACGAGTAAGTGCATCTTCG 59.159 52.381 5.04 2.39 37.56 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.