Multiple sequence alignment - TraesCS3D01G142200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G142200 | chr3D | 100.000 | 2567 | 0 | 0 | 1 | 2567 | 104088053 | 104090619 | 0.000000e+00 | 4741 |
1 | TraesCS3D01G142200 | chr3D | 98.045 | 665 | 10 | 1 | 1903 | 2567 | 3613245 | 3612584 | 0.000000e+00 | 1153 |
2 | TraesCS3D01G142200 | chr3D | 97.748 | 666 | 12 | 1 | 1902 | 2567 | 288046790 | 288046128 | 0.000000e+00 | 1144 |
3 | TraesCS3D01G142200 | chr3D | 85.174 | 344 | 47 | 4 | 32 | 372 | 10422381 | 10422039 | 1.460000e-92 | 350 |
4 | TraesCS3D01G142200 | chr3A | 92.977 | 1310 | 58 | 15 | 452 | 1751 | 552229821 | 552228536 | 0.000000e+00 | 1879 |
5 | TraesCS3D01G142200 | chr3A | 91.914 | 371 | 26 | 2 | 2 | 369 | 644672907 | 644672538 | 1.360000e-142 | 516 |
6 | TraesCS3D01G142200 | chr3B | 95.307 | 1044 | 30 | 7 | 514 | 1547 | 154763771 | 154764805 | 0.000000e+00 | 1639 |
7 | TraesCS3D01G142200 | chr3B | 90.226 | 133 | 7 | 4 | 1774 | 1905 | 154765284 | 154765411 | 4.390000e-38 | 169 |
8 | TraesCS3D01G142200 | chr7D | 98.195 | 665 | 9 | 1 | 1903 | 2567 | 613376559 | 613377220 | 0.000000e+00 | 1158 |
9 | TraesCS3D01G142200 | chr7D | 97.751 | 667 | 12 | 1 | 1901 | 2567 | 30910377 | 30909714 | 0.000000e+00 | 1146 |
10 | TraesCS3D01G142200 | chr4D | 97.768 | 672 | 11 | 2 | 1896 | 2567 | 223441694 | 223442361 | 0.000000e+00 | 1155 |
11 | TraesCS3D01G142200 | chr4D | 97.615 | 671 | 13 | 1 | 1900 | 2567 | 77263976 | 77264646 | 0.000000e+00 | 1147 |
12 | TraesCS3D01G142200 | chr6D | 97.895 | 665 | 11 | 1 | 1903 | 2567 | 291373911 | 291374572 | 0.000000e+00 | 1147 |
13 | TraesCS3D01G142200 | chr6D | 97.751 | 667 | 12 | 1 | 1901 | 2567 | 11163422 | 11162759 | 0.000000e+00 | 1146 |
14 | TraesCS3D01G142200 | chr5D | 97.895 | 665 | 11 | 1 | 1903 | 2567 | 393980155 | 393980816 | 0.000000e+00 | 1147 |
15 | TraesCS3D01G142200 | chr7A | 90.933 | 375 | 30 | 3 | 2 | 373 | 448488748 | 448488375 | 3.810000e-138 | 501 |
16 | TraesCS3D01G142200 | chr2A | 91.765 | 340 | 21 | 3 | 32 | 368 | 30571008 | 30571343 | 1.390000e-127 | 466 |
17 | TraesCS3D01G142200 | chr2A | 84.494 | 316 | 42 | 4 | 60 | 371 | 547783480 | 547783792 | 3.210000e-79 | 305 |
18 | TraesCS3D01G142200 | chr5A | 81.868 | 364 | 62 | 4 | 12 | 372 | 400570033 | 400570395 | 1.150000e-78 | 303 |
19 | TraesCS3D01G142200 | chr4B | 81.233 | 373 | 64 | 6 | 3 | 371 | 500103037 | 500103407 | 1.930000e-76 | 296 |
20 | TraesCS3D01G142200 | chr2D | 81.543 | 363 | 62 | 5 | 12 | 371 | 557269603 | 557269243 | 6.950000e-76 | 294 |
21 | TraesCS3D01G142200 | chr2D | 81.921 | 354 | 55 | 6 | 3 | 352 | 594435676 | 594435328 | 8.990000e-75 | 291 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3D01G142200 | chr3D | 104088053 | 104090619 | 2566 | False | 4741 | 4741 | 100.0000 | 1 | 2567 | 1 | chr3D.!!$F1 | 2566 |
1 | TraesCS3D01G142200 | chr3D | 3612584 | 3613245 | 661 | True | 1153 | 1153 | 98.0450 | 1903 | 2567 | 1 | chr3D.!!$R1 | 664 |
2 | TraesCS3D01G142200 | chr3D | 288046128 | 288046790 | 662 | True | 1144 | 1144 | 97.7480 | 1902 | 2567 | 1 | chr3D.!!$R3 | 665 |
3 | TraesCS3D01G142200 | chr3A | 552228536 | 552229821 | 1285 | True | 1879 | 1879 | 92.9770 | 452 | 1751 | 1 | chr3A.!!$R1 | 1299 |
4 | TraesCS3D01G142200 | chr3B | 154763771 | 154765411 | 1640 | False | 904 | 1639 | 92.7665 | 514 | 1905 | 2 | chr3B.!!$F1 | 1391 |
5 | TraesCS3D01G142200 | chr7D | 613376559 | 613377220 | 661 | False | 1158 | 1158 | 98.1950 | 1903 | 2567 | 1 | chr7D.!!$F1 | 664 |
6 | TraesCS3D01G142200 | chr7D | 30909714 | 30910377 | 663 | True | 1146 | 1146 | 97.7510 | 1901 | 2567 | 1 | chr7D.!!$R1 | 666 |
7 | TraesCS3D01G142200 | chr4D | 223441694 | 223442361 | 667 | False | 1155 | 1155 | 97.7680 | 1896 | 2567 | 1 | chr4D.!!$F2 | 671 |
8 | TraesCS3D01G142200 | chr4D | 77263976 | 77264646 | 670 | False | 1147 | 1147 | 97.6150 | 1900 | 2567 | 1 | chr4D.!!$F1 | 667 |
9 | TraesCS3D01G142200 | chr6D | 291373911 | 291374572 | 661 | False | 1147 | 1147 | 97.8950 | 1903 | 2567 | 1 | chr6D.!!$F1 | 664 |
10 | TraesCS3D01G142200 | chr6D | 11162759 | 11163422 | 663 | True | 1146 | 1146 | 97.7510 | 1901 | 2567 | 1 | chr6D.!!$R1 | 666 |
11 | TraesCS3D01G142200 | chr5D | 393980155 | 393980816 | 661 | False | 1147 | 1147 | 97.8950 | 1903 | 2567 | 1 | chr5D.!!$F1 | 664 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
42 | 43 | 0.040067 | CTTCCGCTTGGCACTTGTTC | 60.04 | 55.0 | 0.0 | 0.0 | 0.0 | 3.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1832 | 2137 | 0.108138 | GTAGACACCAAGCCGAGCAT | 60.108 | 55.0 | 0.0 | 0.0 | 0.0 | 3.79 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 4.928661 | GCTTCACATGTACGACTTTGAT | 57.071 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
23 | 24 | 5.786392 | GCTTCACATGTACGACTTTGATAC | 58.214 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
24 | 25 | 5.577164 | GCTTCACATGTACGACTTTGATACT | 59.423 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
25 | 26 | 6.090898 | GCTTCACATGTACGACTTTGATACTT | 59.909 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
26 | 27 | 7.576750 | TTCACATGTACGACTTTGATACTTC | 57.423 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
27 | 28 | 6.097356 | TCACATGTACGACTTTGATACTTCC | 58.903 | 40.000 | 0.00 | 0.00 | 0.00 | 3.46 |
28 | 29 | 5.004440 | CACATGTACGACTTTGATACTTCCG | 59.996 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
29 | 30 | 3.504863 | TGTACGACTTTGATACTTCCGC | 58.495 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
30 | 31 | 3.192001 | TGTACGACTTTGATACTTCCGCT | 59.808 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
31 | 32 | 3.314541 | ACGACTTTGATACTTCCGCTT | 57.685 | 42.857 | 0.00 | 0.00 | 0.00 | 4.68 |
32 | 33 | 2.993899 | ACGACTTTGATACTTCCGCTTG | 59.006 | 45.455 | 0.00 | 0.00 | 0.00 | 4.01 |
33 | 34 | 2.348666 | CGACTTTGATACTTCCGCTTGG | 59.651 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
34 | 35 | 2.084546 | ACTTTGATACTTCCGCTTGGC | 58.915 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
35 | 36 | 2.083774 | CTTTGATACTTCCGCTTGGCA | 58.916 | 47.619 | 0.00 | 0.00 | 0.00 | 4.92 |
36 | 37 | 1.448985 | TTGATACTTCCGCTTGGCAC | 58.551 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
37 | 38 | 0.613260 | TGATACTTCCGCTTGGCACT | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
38 | 39 | 1.003118 | TGATACTTCCGCTTGGCACTT | 59.997 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
39 | 40 | 1.398390 | GATACTTCCGCTTGGCACTTG | 59.602 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
40 | 41 | 0.107831 | TACTTCCGCTTGGCACTTGT | 59.892 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
41 | 42 | 0.751643 | ACTTCCGCTTGGCACTTGTT | 60.752 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
42 | 43 | 0.040067 | CTTCCGCTTGGCACTTGTTC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
43 | 44 | 1.781025 | TTCCGCTTGGCACTTGTTCG | 61.781 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
44 | 45 | 2.250939 | CCGCTTGGCACTTGTTCGA | 61.251 | 57.895 | 0.00 | 0.00 | 0.00 | 3.71 |
45 | 46 | 1.082756 | CGCTTGGCACTTGTTCGAC | 60.083 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
46 | 47 | 1.498865 | CGCTTGGCACTTGTTCGACT | 61.499 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
47 | 48 | 0.235926 | GCTTGGCACTTGTTCGACTC | 59.764 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
48 | 49 | 0.868406 | CTTGGCACTTGTTCGACTCC | 59.132 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
49 | 50 | 0.534203 | TTGGCACTTGTTCGACTCCC | 60.534 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
50 | 51 | 2.027625 | GGCACTTGTTCGACTCCCG | 61.028 | 63.158 | 0.00 | 0.00 | 40.25 | 5.14 |
51 | 52 | 1.300697 | GCACTTGTTCGACTCCCGT | 60.301 | 57.895 | 0.00 | 0.00 | 39.75 | 5.28 |
52 | 53 | 1.282930 | GCACTTGTTCGACTCCCGTC | 61.283 | 60.000 | 0.00 | 0.00 | 39.75 | 4.79 |
53 | 54 | 0.666577 | CACTTGTTCGACTCCCGTCC | 60.667 | 60.000 | 0.00 | 0.00 | 39.75 | 4.79 |
54 | 55 | 1.111116 | ACTTGTTCGACTCCCGTCCA | 61.111 | 55.000 | 0.00 | 0.00 | 39.75 | 4.02 |
55 | 56 | 0.666577 | CTTGTTCGACTCCCGTCCAC | 60.667 | 60.000 | 0.00 | 0.00 | 39.75 | 4.02 |
56 | 57 | 2.126580 | GTTCGACTCCCGTCCACG | 60.127 | 66.667 | 0.00 | 0.00 | 39.75 | 4.94 |
57 | 58 | 2.281692 | TTCGACTCCCGTCCACGA | 60.282 | 61.111 | 0.00 | 0.00 | 43.02 | 4.35 |
58 | 59 | 2.330372 | TTCGACTCCCGTCCACGAG | 61.330 | 63.158 | 0.00 | 0.00 | 43.02 | 4.18 |
59 | 60 | 3.054503 | CGACTCCCGTCCACGAGT | 61.055 | 66.667 | 0.00 | 0.00 | 43.02 | 4.18 |
60 | 61 | 2.567049 | GACTCCCGTCCACGAGTG | 59.433 | 66.667 | 0.00 | 0.00 | 43.02 | 3.51 |
107 | 108 | 1.794222 | GGCGACCGAAATGTGAAGG | 59.206 | 57.895 | 0.00 | 0.00 | 0.00 | 3.46 |
108 | 109 | 1.134694 | GCGACCGAAATGTGAAGGC | 59.865 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
109 | 110 | 1.573829 | GCGACCGAAATGTGAAGGCA | 61.574 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
110 | 111 | 1.086696 | CGACCGAAATGTGAAGGCAT | 58.913 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
111 | 112 | 1.062587 | CGACCGAAATGTGAAGGCATC | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
112 | 113 | 2.083774 | GACCGAAATGTGAAGGCATCA | 58.916 | 47.619 | 0.00 | 0.00 | 35.05 | 3.07 |
113 | 114 | 2.487762 | GACCGAAATGTGAAGGCATCAA | 59.512 | 45.455 | 0.00 | 0.00 | 40.50 | 2.57 |
114 | 115 | 3.091545 | ACCGAAATGTGAAGGCATCAAT | 58.908 | 40.909 | 0.00 | 0.00 | 40.50 | 2.57 |
115 | 116 | 3.511146 | ACCGAAATGTGAAGGCATCAATT | 59.489 | 39.130 | 0.00 | 0.00 | 40.50 | 2.32 |
116 | 117 | 4.704540 | ACCGAAATGTGAAGGCATCAATTA | 59.295 | 37.500 | 0.00 | 0.00 | 40.50 | 1.40 |
117 | 118 | 5.036737 | CCGAAATGTGAAGGCATCAATTAC | 58.963 | 41.667 | 0.00 | 0.00 | 40.50 | 1.89 |
118 | 119 | 5.392919 | CCGAAATGTGAAGGCATCAATTACA | 60.393 | 40.000 | 0.00 | 0.00 | 40.50 | 2.41 |
119 | 120 | 6.092092 | CGAAATGTGAAGGCATCAATTACAA | 58.908 | 36.000 | 0.00 | 0.00 | 40.50 | 2.41 |
120 | 121 | 6.753279 | CGAAATGTGAAGGCATCAATTACAAT | 59.247 | 34.615 | 0.00 | 0.00 | 40.50 | 2.71 |
121 | 122 | 7.253850 | CGAAATGTGAAGGCATCAATTACAATG | 60.254 | 37.037 | 0.00 | 0.00 | 40.50 | 2.82 |
122 | 123 | 4.746729 | TGTGAAGGCATCAATTACAATGC | 58.253 | 39.130 | 9.87 | 9.87 | 45.96 | 3.56 |
123 | 124 | 4.463539 | TGTGAAGGCATCAATTACAATGCT | 59.536 | 37.500 | 15.27 | 2.06 | 45.95 | 3.79 |
124 | 125 | 4.802039 | GTGAAGGCATCAATTACAATGCTG | 59.198 | 41.667 | 15.27 | 0.00 | 45.95 | 4.41 |
125 | 126 | 4.142116 | TGAAGGCATCAATTACAATGCTGG | 60.142 | 41.667 | 15.27 | 0.00 | 45.95 | 4.85 |
126 | 127 | 3.368248 | AGGCATCAATTACAATGCTGGT | 58.632 | 40.909 | 15.27 | 3.37 | 45.95 | 4.00 |
127 | 128 | 3.770933 | AGGCATCAATTACAATGCTGGTT | 59.229 | 39.130 | 15.27 | 2.41 | 45.95 | 3.67 |
128 | 129 | 4.223477 | AGGCATCAATTACAATGCTGGTTT | 59.777 | 37.500 | 15.27 | 0.72 | 45.95 | 3.27 |
129 | 130 | 4.567959 | GGCATCAATTACAATGCTGGTTTC | 59.432 | 41.667 | 15.27 | 0.33 | 45.95 | 2.78 |
130 | 131 | 4.266029 | GCATCAATTACAATGCTGGTTTCG | 59.734 | 41.667 | 10.71 | 0.00 | 43.87 | 3.46 |
131 | 132 | 5.401550 | CATCAATTACAATGCTGGTTTCGT | 58.598 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
132 | 133 | 4.793071 | TCAATTACAATGCTGGTTTCGTG | 58.207 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
133 | 134 | 3.848272 | ATTACAATGCTGGTTTCGTGG | 57.152 | 42.857 | 0.00 | 0.00 | 0.00 | 4.94 |
134 | 135 | 1.529226 | TACAATGCTGGTTTCGTGGG | 58.471 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
135 | 136 | 0.467290 | ACAATGCTGGTTTCGTGGGT | 60.467 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
136 | 137 | 0.673437 | CAATGCTGGTTTCGTGGGTT | 59.327 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
137 | 138 | 1.883275 | CAATGCTGGTTTCGTGGGTTA | 59.117 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
138 | 139 | 2.491693 | CAATGCTGGTTTCGTGGGTTAT | 59.508 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
139 | 140 | 1.816074 | TGCTGGTTTCGTGGGTTATC | 58.184 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
140 | 141 | 1.349688 | TGCTGGTTTCGTGGGTTATCT | 59.650 | 47.619 | 0.00 | 0.00 | 0.00 | 1.98 |
141 | 142 | 1.737793 | GCTGGTTTCGTGGGTTATCTG | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
142 | 143 | 2.356135 | CTGGTTTCGTGGGTTATCTGG | 58.644 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
143 | 144 | 1.979308 | TGGTTTCGTGGGTTATCTGGA | 59.021 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
144 | 145 | 2.372504 | TGGTTTCGTGGGTTATCTGGAA | 59.627 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
145 | 146 | 2.745821 | GGTTTCGTGGGTTATCTGGAAC | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
146 | 147 | 2.373540 | TTCGTGGGTTATCTGGAACG | 57.626 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
147 | 148 | 1.548081 | TCGTGGGTTATCTGGAACGA | 58.452 | 50.000 | 0.00 | 0.00 | 37.68 | 3.85 |
148 | 149 | 1.475280 | TCGTGGGTTATCTGGAACGAG | 59.525 | 52.381 | 0.00 | 0.00 | 35.35 | 4.18 |
149 | 150 | 1.653151 | GTGGGTTATCTGGAACGAGC | 58.347 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
150 | 151 | 1.207329 | GTGGGTTATCTGGAACGAGCT | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
151 | 152 | 1.906574 | TGGGTTATCTGGAACGAGCTT | 59.093 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
152 | 153 | 3.101437 | TGGGTTATCTGGAACGAGCTTA | 58.899 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
153 | 154 | 3.516300 | TGGGTTATCTGGAACGAGCTTAA | 59.484 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
154 | 155 | 4.163458 | TGGGTTATCTGGAACGAGCTTAAT | 59.837 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
155 | 156 | 4.511826 | GGGTTATCTGGAACGAGCTTAATG | 59.488 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
156 | 157 | 4.024809 | GGTTATCTGGAACGAGCTTAATGC | 60.025 | 45.833 | 0.00 | 0.00 | 43.29 | 3.56 |
157 | 158 | 2.760634 | TCTGGAACGAGCTTAATGCA | 57.239 | 45.000 | 0.00 | 0.00 | 45.94 | 3.96 |
158 | 159 | 3.052455 | TCTGGAACGAGCTTAATGCAA | 57.948 | 42.857 | 0.00 | 0.00 | 45.94 | 4.08 |
159 | 160 | 3.002791 | TCTGGAACGAGCTTAATGCAAG | 58.997 | 45.455 | 0.00 | 0.00 | 45.94 | 4.01 |
160 | 161 | 2.083774 | TGGAACGAGCTTAATGCAAGG | 58.916 | 47.619 | 0.00 | 0.00 | 45.94 | 3.61 |
162 | 163 | 2.488153 | GGAACGAGCTTAATGCAAGGTT | 59.512 | 45.455 | 0.00 | 0.00 | 44.94 | 3.50 |
163 | 164 | 3.057526 | GGAACGAGCTTAATGCAAGGTTT | 60.058 | 43.478 | 0.00 | 0.00 | 44.94 | 3.27 |
164 | 165 | 3.831715 | ACGAGCTTAATGCAAGGTTTC | 57.168 | 42.857 | 0.00 | 0.00 | 44.94 | 2.78 |
165 | 166 | 2.159627 | ACGAGCTTAATGCAAGGTTTCG | 59.840 | 45.455 | 0.00 | 0.00 | 44.94 | 3.46 |
166 | 167 | 2.476185 | CGAGCTTAATGCAAGGTTTCGG | 60.476 | 50.000 | 0.00 | 0.00 | 44.94 | 4.30 |
167 | 168 | 1.202348 | AGCTTAATGCAAGGTTTCGGC | 59.798 | 47.619 | 0.00 | 0.00 | 42.32 | 5.54 |
168 | 169 | 1.067915 | GCTTAATGCAAGGTTTCGGCA | 60.068 | 47.619 | 0.00 | 0.00 | 42.31 | 5.69 |
170 | 171 | 3.181491 | GCTTAATGCAAGGTTTCGGCATA | 60.181 | 43.478 | 0.00 | 0.00 | 46.77 | 3.14 |
171 | 172 | 4.676723 | GCTTAATGCAAGGTTTCGGCATAA | 60.677 | 41.667 | 0.00 | 0.00 | 46.77 | 1.90 |
172 | 173 | 3.508744 | AATGCAAGGTTTCGGCATAAG | 57.491 | 42.857 | 0.00 | 0.00 | 46.77 | 1.73 |
173 | 174 | 2.192664 | TGCAAGGTTTCGGCATAAGA | 57.807 | 45.000 | 0.00 | 0.00 | 31.58 | 2.10 |
174 | 175 | 2.083774 | TGCAAGGTTTCGGCATAAGAG | 58.916 | 47.619 | 0.00 | 0.00 | 31.58 | 2.85 |
175 | 176 | 1.202188 | GCAAGGTTTCGGCATAAGAGC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
176 | 177 | 1.062587 | CAAGGTTTCGGCATAAGAGCG | 59.937 | 52.381 | 0.00 | 0.00 | 34.64 | 5.03 |
177 | 178 | 1.090052 | AGGTTTCGGCATAAGAGCGC | 61.090 | 55.000 | 0.00 | 0.00 | 34.64 | 5.92 |
178 | 179 | 1.366111 | GGTTTCGGCATAAGAGCGCA | 61.366 | 55.000 | 11.47 | 0.00 | 34.64 | 6.09 |
179 | 180 | 0.657840 | GTTTCGGCATAAGAGCGCAT | 59.342 | 50.000 | 11.47 | 0.00 | 34.64 | 4.73 |
180 | 181 | 0.937304 | TTTCGGCATAAGAGCGCATC | 59.063 | 50.000 | 11.47 | 4.24 | 34.64 | 3.91 |
181 | 182 | 0.179086 | TTCGGCATAAGAGCGCATCA | 60.179 | 50.000 | 11.47 | 0.00 | 34.64 | 3.07 |
182 | 183 | 0.875908 | TCGGCATAAGAGCGCATCAC | 60.876 | 55.000 | 11.47 | 0.00 | 34.64 | 3.06 |
183 | 184 | 1.835483 | CGGCATAAGAGCGCATCACC | 61.835 | 60.000 | 11.47 | 0.00 | 34.64 | 4.02 |
184 | 185 | 1.566563 | GCATAAGAGCGCATCACCG | 59.433 | 57.895 | 11.47 | 0.00 | 0.00 | 4.94 |
192 | 193 | 3.501396 | CGCATCACCGCAAATCCT | 58.499 | 55.556 | 0.00 | 0.00 | 0.00 | 3.24 |
193 | 194 | 2.689083 | CGCATCACCGCAAATCCTA | 58.311 | 52.632 | 0.00 | 0.00 | 0.00 | 2.94 |
194 | 195 | 0.304705 | CGCATCACCGCAAATCCTAC | 59.695 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
195 | 196 | 1.668419 | GCATCACCGCAAATCCTACT | 58.332 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
196 | 197 | 1.599542 | GCATCACCGCAAATCCTACTC | 59.400 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
197 | 198 | 2.905075 | CATCACCGCAAATCCTACTCA | 58.095 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
198 | 199 | 3.270027 | CATCACCGCAAATCCTACTCAA | 58.730 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
199 | 200 | 2.695359 | TCACCGCAAATCCTACTCAAC | 58.305 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
200 | 201 | 2.037902 | TCACCGCAAATCCTACTCAACA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
201 | 202 | 2.159627 | CACCGCAAATCCTACTCAACAC | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
202 | 203 | 1.737793 | CCGCAAATCCTACTCAACACC | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
203 | 204 | 2.422597 | CGCAAATCCTACTCAACACCA | 58.577 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
204 | 205 | 3.009723 | CGCAAATCCTACTCAACACCAT | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
205 | 206 | 3.063997 | CGCAAATCCTACTCAACACCATC | 59.936 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
206 | 207 | 4.009675 | GCAAATCCTACTCAACACCATCA | 58.990 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
207 | 208 | 4.641989 | GCAAATCCTACTCAACACCATCAT | 59.358 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
208 | 209 | 5.220931 | GCAAATCCTACTCAACACCATCATC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.92 |
209 | 210 | 3.801114 | TCCTACTCAACACCATCATCG | 57.199 | 47.619 | 0.00 | 0.00 | 0.00 | 3.84 |
210 | 211 | 3.361786 | TCCTACTCAACACCATCATCGA | 58.638 | 45.455 | 0.00 | 0.00 | 0.00 | 3.59 |
211 | 212 | 3.960755 | TCCTACTCAACACCATCATCGAT | 59.039 | 43.478 | 0.00 | 0.00 | 0.00 | 3.59 |
212 | 213 | 4.053983 | CCTACTCAACACCATCATCGATG | 58.946 | 47.826 | 19.61 | 19.61 | 39.52 | 3.84 |
213 | 214 | 3.893326 | ACTCAACACCATCATCGATGA | 57.107 | 42.857 | 29.09 | 29.09 | 42.09 | 2.92 |
214 | 215 | 3.790091 | ACTCAACACCATCATCGATGAG | 58.210 | 45.455 | 30.11 | 20.79 | 42.09 | 2.90 |
215 | 216 | 3.448660 | ACTCAACACCATCATCGATGAGA | 59.551 | 43.478 | 30.11 | 19.31 | 42.09 | 3.27 |
216 | 217 | 3.785486 | TCAACACCATCATCGATGAGAC | 58.215 | 45.455 | 30.11 | 0.00 | 42.09 | 3.36 |
217 | 218 | 3.195396 | TCAACACCATCATCGATGAGACA | 59.805 | 43.478 | 30.11 | 10.46 | 42.09 | 3.41 |
218 | 219 | 3.893326 | ACACCATCATCGATGAGACAA | 57.107 | 42.857 | 30.11 | 10.08 | 42.09 | 3.18 |
219 | 220 | 4.206477 | ACACCATCATCGATGAGACAAA | 57.794 | 40.909 | 30.11 | 9.34 | 42.09 | 2.83 |
220 | 221 | 3.935203 | ACACCATCATCGATGAGACAAAC | 59.065 | 43.478 | 30.11 | 0.00 | 42.09 | 2.93 |
221 | 222 | 3.310774 | CACCATCATCGATGAGACAAACC | 59.689 | 47.826 | 30.11 | 0.00 | 42.09 | 3.27 |
222 | 223 | 3.198635 | ACCATCATCGATGAGACAAACCT | 59.801 | 43.478 | 30.11 | 10.79 | 42.09 | 3.50 |
223 | 224 | 4.194640 | CCATCATCGATGAGACAAACCTT | 58.805 | 43.478 | 30.11 | 10.09 | 42.09 | 3.50 |
224 | 225 | 4.637534 | CCATCATCGATGAGACAAACCTTT | 59.362 | 41.667 | 30.11 | 9.37 | 42.09 | 3.11 |
225 | 226 | 5.448225 | CCATCATCGATGAGACAAACCTTTG | 60.448 | 44.000 | 30.11 | 19.32 | 42.09 | 2.77 |
226 | 227 | 4.002982 | TCATCGATGAGACAAACCTTTGG | 58.997 | 43.478 | 23.99 | 0.00 | 36.10 | 3.28 |
227 | 228 | 2.778299 | TCGATGAGACAAACCTTTGGG | 58.222 | 47.619 | 2.94 | 0.00 | 42.34 | 4.12 |
228 | 229 | 7.496639 | TCATCGATGAGACAAACCTTTGGGT | 62.497 | 44.000 | 23.99 | 0.00 | 38.73 | 4.51 |
229 | 230 | 2.484264 | CGATGAGACAAACCTTTGGGTC | 59.516 | 50.000 | 2.94 | 0.00 | 46.67 | 4.46 |
230 | 231 | 3.486383 | GATGAGACAAACCTTTGGGTCA | 58.514 | 45.455 | 2.94 | 5.12 | 46.67 | 4.02 |
231 | 232 | 2.650322 | TGAGACAAACCTTTGGGTCAC | 58.350 | 47.619 | 2.94 | 0.00 | 46.67 | 3.67 |
232 | 233 | 1.602377 | GAGACAAACCTTTGGGTCACG | 59.398 | 52.381 | 2.94 | 0.00 | 46.67 | 4.35 |
233 | 234 | 0.666374 | GACAAACCTTTGGGTCACGG | 59.334 | 55.000 | 2.94 | 0.00 | 46.67 | 4.94 |
234 | 235 | 1.362355 | CAAACCTTTGGGTCACGGC | 59.638 | 57.895 | 0.00 | 0.00 | 46.67 | 5.68 |
235 | 236 | 1.830847 | AAACCTTTGGGTCACGGCC | 60.831 | 57.895 | 0.00 | 0.00 | 46.67 | 6.13 |
236 | 237 | 4.636435 | ACCTTTGGGTCACGGCCG | 62.636 | 66.667 | 26.86 | 26.86 | 43.38 | 6.13 |
249 | 250 | 2.754254 | GGCCGGGGCGAAGAAATT | 60.754 | 61.111 | 4.27 | 0.00 | 43.06 | 1.82 |
250 | 251 | 1.452470 | GGCCGGGGCGAAGAAATTA | 60.452 | 57.895 | 4.27 | 0.00 | 43.06 | 1.40 |
251 | 252 | 1.444917 | GGCCGGGGCGAAGAAATTAG | 61.445 | 60.000 | 4.27 | 0.00 | 43.06 | 1.73 |
252 | 253 | 1.444917 | GCCGGGGCGAAGAAATTAGG | 61.445 | 60.000 | 2.18 | 0.00 | 0.00 | 2.69 |
253 | 254 | 0.818040 | CCGGGGCGAAGAAATTAGGG | 60.818 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
254 | 255 | 0.107361 | CGGGGCGAAGAAATTAGGGT | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
255 | 256 | 1.676746 | GGGGCGAAGAAATTAGGGTC | 58.323 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
256 | 257 | 1.212195 | GGGGCGAAGAAATTAGGGTCT | 59.788 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
257 | 258 | 2.356844 | GGGGCGAAGAAATTAGGGTCTT | 60.357 | 50.000 | 0.00 | 0.00 | 36.80 | 3.01 |
258 | 259 | 3.353557 | GGGCGAAGAAATTAGGGTCTTT | 58.646 | 45.455 | 0.00 | 0.00 | 34.23 | 2.52 |
259 | 260 | 3.762288 | GGGCGAAGAAATTAGGGTCTTTT | 59.238 | 43.478 | 0.00 | 0.00 | 34.23 | 2.27 |
260 | 261 | 4.219944 | GGGCGAAGAAATTAGGGTCTTTTT | 59.780 | 41.667 | 0.00 | 0.00 | 34.23 | 1.94 |
283 | 284 | 7.912949 | TTTATTGCGAGAATAATTGTCATGC | 57.087 | 32.000 | 0.00 | 0.00 | 0.00 | 4.06 |
284 | 285 | 3.969117 | TGCGAGAATAATTGTCATGCC | 57.031 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
285 | 286 | 2.287644 | TGCGAGAATAATTGTCATGCCG | 59.712 | 45.455 | 0.00 | 0.00 | 0.00 | 5.69 |
286 | 287 | 2.543848 | GCGAGAATAATTGTCATGCCGA | 59.456 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
287 | 288 | 3.187227 | GCGAGAATAATTGTCATGCCGAT | 59.813 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
288 | 289 | 4.319766 | GCGAGAATAATTGTCATGCCGATT | 60.320 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
289 | 290 | 5.377358 | CGAGAATAATTGTCATGCCGATTC | 58.623 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
290 | 291 | 5.178252 | CGAGAATAATTGTCATGCCGATTCT | 59.822 | 40.000 | 0.00 | 0.00 | 35.44 | 2.40 |
291 | 292 | 6.293081 | CGAGAATAATTGTCATGCCGATTCTT | 60.293 | 38.462 | 0.00 | 0.00 | 33.47 | 2.52 |
292 | 293 | 6.732154 | AGAATAATTGTCATGCCGATTCTTG | 58.268 | 36.000 | 0.00 | 0.00 | 30.00 | 3.02 |
293 | 294 | 3.788333 | AATTGTCATGCCGATTCTTGG | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 3.61 |
301 | 302 | 2.932663 | CCGATTCTTGGCTGTGTGT | 58.067 | 52.632 | 0.00 | 0.00 | 0.00 | 3.72 |
302 | 303 | 1.238439 | CCGATTCTTGGCTGTGTGTT | 58.762 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
303 | 304 | 1.069022 | CCGATTCTTGGCTGTGTGTTG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
304 | 305 | 1.603802 | CGATTCTTGGCTGTGTGTTGT | 59.396 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
305 | 306 | 2.805671 | CGATTCTTGGCTGTGTGTTGTA | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
306 | 307 | 3.249799 | CGATTCTTGGCTGTGTGTTGTAA | 59.750 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
307 | 308 | 4.537015 | GATTCTTGGCTGTGTGTTGTAAC | 58.463 | 43.478 | 0.00 | 0.00 | 0.00 | 2.50 |
308 | 309 | 2.992593 | TCTTGGCTGTGTGTTGTAACA | 58.007 | 42.857 | 0.00 | 0.00 | 36.38 | 2.41 |
309 | 310 | 3.348119 | TCTTGGCTGTGTGTTGTAACAA | 58.652 | 40.909 | 0.00 | 0.00 | 41.21 | 2.83 |
310 | 311 | 3.759086 | TCTTGGCTGTGTGTTGTAACAAA | 59.241 | 39.130 | 0.00 | 0.00 | 41.21 | 2.83 |
311 | 312 | 3.495670 | TGGCTGTGTGTTGTAACAAAC | 57.504 | 42.857 | 10.43 | 10.43 | 45.37 | 2.93 |
312 | 313 | 3.085533 | TGGCTGTGTGTTGTAACAAACT | 58.914 | 40.909 | 16.56 | 0.00 | 45.37 | 2.66 |
313 | 314 | 3.127895 | TGGCTGTGTGTTGTAACAAACTC | 59.872 | 43.478 | 16.56 | 9.71 | 45.37 | 3.01 |
314 | 315 | 3.377172 | GGCTGTGTGTTGTAACAAACTCT | 59.623 | 43.478 | 16.56 | 0.00 | 45.37 | 3.24 |
315 | 316 | 4.142469 | GGCTGTGTGTTGTAACAAACTCTT | 60.142 | 41.667 | 16.56 | 0.00 | 45.37 | 2.85 |
316 | 317 | 5.399013 | GCTGTGTGTTGTAACAAACTCTTT | 58.601 | 37.500 | 16.56 | 0.00 | 45.37 | 2.52 |
317 | 318 | 5.861787 | GCTGTGTGTTGTAACAAACTCTTTT | 59.138 | 36.000 | 16.56 | 0.00 | 45.37 | 2.27 |
318 | 319 | 6.364976 | GCTGTGTGTTGTAACAAACTCTTTTT | 59.635 | 34.615 | 16.56 | 0.00 | 45.37 | 1.94 |
319 | 320 | 7.410407 | GCTGTGTGTTGTAACAAACTCTTTTTC | 60.410 | 37.037 | 16.56 | 0.00 | 45.37 | 2.29 |
320 | 321 | 6.864165 | TGTGTGTTGTAACAAACTCTTTTTCC | 59.136 | 34.615 | 16.56 | 0.00 | 45.37 | 3.13 |
321 | 322 | 7.088272 | GTGTGTTGTAACAAACTCTTTTTCCT | 58.912 | 34.615 | 10.14 | 0.00 | 42.56 | 3.36 |
322 | 323 | 7.272731 | GTGTGTTGTAACAAACTCTTTTTCCTC | 59.727 | 37.037 | 10.14 | 0.00 | 42.56 | 3.71 |
323 | 324 | 6.750501 | GTGTTGTAACAAACTCTTTTTCCTCC | 59.249 | 38.462 | 0.00 | 0.00 | 41.21 | 4.30 |
324 | 325 | 6.661805 | TGTTGTAACAAACTCTTTTTCCTCCT | 59.338 | 34.615 | 0.00 | 0.00 | 35.67 | 3.69 |
325 | 326 | 7.177744 | TGTTGTAACAAACTCTTTTTCCTCCTT | 59.822 | 33.333 | 0.00 | 0.00 | 35.67 | 3.36 |
326 | 327 | 8.680001 | GTTGTAACAAACTCTTTTTCCTCCTTA | 58.320 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
327 | 328 | 8.990163 | TGTAACAAACTCTTTTTCCTCCTTAT | 57.010 | 30.769 | 0.00 | 0.00 | 0.00 | 1.73 |
328 | 329 | 9.416284 | TGTAACAAACTCTTTTTCCTCCTTATT | 57.584 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
393 | 394 | 7.637631 | AAATCTGGAGAGGAAAAATAGAAGC | 57.362 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
394 | 395 | 5.762179 | TCTGGAGAGGAAAAATAGAAGCA | 57.238 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
395 | 396 | 6.126863 | TCTGGAGAGGAAAAATAGAAGCAA | 57.873 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
396 | 397 | 6.725364 | TCTGGAGAGGAAAAATAGAAGCAAT | 58.275 | 36.000 | 0.00 | 0.00 | 0.00 | 3.56 |
397 | 398 | 6.600822 | TCTGGAGAGGAAAAATAGAAGCAATG | 59.399 | 38.462 | 0.00 | 0.00 | 0.00 | 2.82 |
398 | 399 | 5.653769 | TGGAGAGGAAAAATAGAAGCAATGG | 59.346 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
399 | 400 | 5.451103 | GGAGAGGAAAAATAGAAGCAATGGC | 60.451 | 44.000 | 0.00 | 0.00 | 41.61 | 4.40 |
400 | 401 | 5.018809 | AGAGGAAAAATAGAAGCAATGGCA | 58.981 | 37.500 | 0.00 | 0.00 | 44.61 | 4.92 |
401 | 402 | 5.077134 | AGGAAAAATAGAAGCAATGGCAC | 57.923 | 39.130 | 0.00 | 0.00 | 44.61 | 5.01 |
402 | 403 | 4.081476 | AGGAAAAATAGAAGCAATGGCACC | 60.081 | 41.667 | 0.00 | 0.00 | 44.61 | 5.01 |
403 | 404 | 4.322650 | GGAAAAATAGAAGCAATGGCACCA | 60.323 | 41.667 | 0.00 | 0.00 | 44.61 | 4.17 |
404 | 405 | 3.874392 | AAATAGAAGCAATGGCACCAC | 57.126 | 42.857 | 0.00 | 0.00 | 44.61 | 4.16 |
405 | 406 | 2.814805 | ATAGAAGCAATGGCACCACT | 57.185 | 45.000 | 0.00 | 0.00 | 44.61 | 4.00 |
406 | 407 | 1.825090 | TAGAAGCAATGGCACCACTG | 58.175 | 50.000 | 0.00 | 0.00 | 44.61 | 3.66 |
407 | 408 | 0.111061 | AGAAGCAATGGCACCACTGA | 59.889 | 50.000 | 1.58 | 0.00 | 44.61 | 3.41 |
408 | 409 | 0.961019 | GAAGCAATGGCACCACTGAA | 59.039 | 50.000 | 1.58 | 0.00 | 44.61 | 3.02 |
409 | 410 | 1.340889 | GAAGCAATGGCACCACTGAAA | 59.659 | 47.619 | 1.58 | 0.00 | 44.61 | 2.69 |
410 | 411 | 0.963962 | AGCAATGGCACCACTGAAAG | 59.036 | 50.000 | 1.58 | 0.00 | 44.61 | 2.62 |
411 | 412 | 0.668401 | GCAATGGCACCACTGAAAGC | 60.668 | 55.000 | 1.58 | 0.00 | 40.72 | 3.51 |
412 | 413 | 0.963962 | CAATGGCACCACTGAAAGCT | 59.036 | 50.000 | 0.00 | 0.00 | 37.60 | 3.74 |
413 | 414 | 0.963962 | AATGGCACCACTGAAAGCTG | 59.036 | 50.000 | 0.00 | 0.00 | 37.60 | 4.24 |
414 | 415 | 0.111061 | ATGGCACCACTGAAAGCTGA | 59.889 | 50.000 | 0.00 | 0.00 | 37.60 | 4.26 |
415 | 416 | 0.535780 | TGGCACCACTGAAAGCTGAG | 60.536 | 55.000 | 0.00 | 0.00 | 37.60 | 3.35 |
416 | 417 | 0.250467 | GGCACCACTGAAAGCTGAGA | 60.250 | 55.000 | 0.00 | 0.00 | 37.60 | 3.27 |
417 | 418 | 0.871057 | GCACCACTGAAAGCTGAGAC | 59.129 | 55.000 | 0.00 | 0.00 | 37.60 | 3.36 |
418 | 419 | 1.517242 | CACCACTGAAAGCTGAGACC | 58.483 | 55.000 | 0.00 | 0.00 | 37.60 | 3.85 |
419 | 420 | 1.131638 | ACCACTGAAAGCTGAGACCA | 58.868 | 50.000 | 0.00 | 0.00 | 37.60 | 4.02 |
420 | 421 | 1.701847 | ACCACTGAAAGCTGAGACCAT | 59.298 | 47.619 | 0.00 | 0.00 | 37.60 | 3.55 |
421 | 422 | 2.082231 | CCACTGAAAGCTGAGACCATG | 58.918 | 52.381 | 0.00 | 0.00 | 37.60 | 3.66 |
422 | 423 | 1.467734 | CACTGAAAGCTGAGACCATGC | 59.532 | 52.381 | 0.00 | 0.00 | 37.60 | 4.06 |
423 | 424 | 1.072806 | ACTGAAAGCTGAGACCATGCA | 59.927 | 47.619 | 0.00 | 0.00 | 37.60 | 3.96 |
424 | 425 | 2.290768 | ACTGAAAGCTGAGACCATGCAT | 60.291 | 45.455 | 0.00 | 0.00 | 37.60 | 3.96 |
425 | 426 | 2.089201 | TGAAAGCTGAGACCATGCATG | 58.911 | 47.619 | 20.19 | 20.19 | 0.00 | 4.06 |
426 | 427 | 0.815734 | AAAGCTGAGACCATGCATGC | 59.184 | 50.000 | 21.69 | 11.82 | 0.00 | 4.06 |
427 | 428 | 0.323087 | AAGCTGAGACCATGCATGCA | 60.323 | 50.000 | 25.04 | 25.04 | 0.00 | 3.96 |
428 | 429 | 0.106669 | AGCTGAGACCATGCATGCAT | 60.107 | 50.000 | 27.46 | 27.46 | 37.08 | 3.96 |
429 | 430 | 1.142262 | AGCTGAGACCATGCATGCATA | 59.858 | 47.619 | 31.73 | 15.06 | 34.91 | 3.14 |
430 | 431 | 1.951602 | GCTGAGACCATGCATGCATAA | 59.048 | 47.619 | 31.73 | 5.65 | 34.91 | 1.90 |
431 | 432 | 2.359848 | GCTGAGACCATGCATGCATAAA | 59.640 | 45.455 | 31.73 | 13.06 | 34.91 | 1.40 |
432 | 433 | 3.005472 | GCTGAGACCATGCATGCATAAAT | 59.995 | 43.478 | 31.73 | 19.82 | 34.91 | 1.40 |
433 | 434 | 4.216902 | GCTGAGACCATGCATGCATAAATA | 59.783 | 41.667 | 31.73 | 15.19 | 34.91 | 1.40 |
434 | 435 | 5.278610 | GCTGAGACCATGCATGCATAAATAA | 60.279 | 40.000 | 31.73 | 15.19 | 34.91 | 1.40 |
435 | 436 | 6.075762 | TGAGACCATGCATGCATAAATAAC | 57.924 | 37.500 | 31.73 | 20.27 | 34.91 | 1.89 |
436 | 437 | 5.112220 | AGACCATGCATGCATAAATAACG | 57.888 | 39.130 | 31.73 | 17.52 | 34.91 | 3.18 |
437 | 438 | 4.821260 | AGACCATGCATGCATAAATAACGA | 59.179 | 37.500 | 31.73 | 0.55 | 34.91 | 3.85 |
438 | 439 | 5.049198 | AGACCATGCATGCATAAATAACGAG | 60.049 | 40.000 | 31.73 | 16.12 | 34.91 | 4.18 |
439 | 440 | 3.916172 | CCATGCATGCATAAATAACGAGC | 59.084 | 43.478 | 31.73 | 0.00 | 34.91 | 5.03 |
440 | 441 | 4.320714 | CCATGCATGCATAAATAACGAGCT | 60.321 | 41.667 | 31.73 | 4.16 | 34.91 | 4.09 |
441 | 442 | 4.898829 | TGCATGCATAAATAACGAGCTT | 57.101 | 36.364 | 18.46 | 0.00 | 0.00 | 3.74 |
442 | 443 | 6.372981 | CATGCATGCATAAATAACGAGCTTA | 58.627 | 36.000 | 31.73 | 0.00 | 34.91 | 3.09 |
443 | 444 | 6.558771 | TGCATGCATAAATAACGAGCTTAT | 57.441 | 33.333 | 18.46 | 0.00 | 0.00 | 1.73 |
444 | 445 | 6.602179 | TGCATGCATAAATAACGAGCTTATC | 58.398 | 36.000 | 18.46 | 0.00 | 0.00 | 1.75 |
445 | 446 | 6.427853 | TGCATGCATAAATAACGAGCTTATCT | 59.572 | 34.615 | 18.46 | 0.00 | 0.00 | 1.98 |
446 | 447 | 7.041167 | TGCATGCATAAATAACGAGCTTATCTT | 60.041 | 33.333 | 18.46 | 0.00 | 0.00 | 2.40 |
447 | 448 | 7.805071 | GCATGCATAAATAACGAGCTTATCTTT | 59.195 | 33.333 | 14.21 | 0.00 | 0.00 | 2.52 |
448 | 449 | 9.322776 | CATGCATAAATAACGAGCTTATCTTTC | 57.677 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
449 | 450 | 7.861630 | TGCATAAATAACGAGCTTATCTTTCC | 58.138 | 34.615 | 0.00 | 0.00 | 0.00 | 3.13 |
450 | 451 | 7.010023 | GCATAAATAACGAGCTTATCTTTCCG | 58.990 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
451 | 452 | 7.095774 | GCATAAATAACGAGCTTATCTTTCCGA | 60.096 | 37.037 | 0.00 | 0.00 | 0.00 | 4.55 |
452 | 453 | 8.926710 | CATAAATAACGAGCTTATCTTTCCGAT | 58.073 | 33.333 | 0.00 | 0.00 | 36.11 | 4.18 |
453 | 454 | 7.787725 | AAATAACGAGCTTATCTTTCCGATT | 57.212 | 32.000 | 0.00 | 0.00 | 33.48 | 3.34 |
454 | 455 | 8.882415 | AAATAACGAGCTTATCTTTCCGATTA | 57.118 | 30.769 | 0.00 | 0.00 | 33.48 | 1.75 |
455 | 456 | 9.490379 | AAATAACGAGCTTATCTTTCCGATTAT | 57.510 | 29.630 | 0.00 | 0.00 | 33.48 | 1.28 |
456 | 457 | 6.771188 | AACGAGCTTATCTTTCCGATTATG | 57.229 | 37.500 | 0.00 | 0.00 | 33.48 | 1.90 |
457 | 458 | 6.085555 | ACGAGCTTATCTTTCCGATTATGA | 57.914 | 37.500 | 0.00 | 0.00 | 33.48 | 2.15 |
458 | 459 | 6.692486 | ACGAGCTTATCTTTCCGATTATGAT | 58.308 | 36.000 | 0.00 | 0.00 | 33.48 | 2.45 |
471 | 472 | 5.692654 | TCCGATTATGATTTTTCGCGTATCA | 59.307 | 36.000 | 5.77 | 11.67 | 33.25 | 2.15 |
481 | 482 | 4.634349 | TTTCGCGTATCACAAACACTAC | 57.366 | 40.909 | 5.77 | 0.00 | 0.00 | 2.73 |
484 | 485 | 4.655027 | TCGCGTATCACAAACACTACTAG | 58.345 | 43.478 | 5.77 | 0.00 | 0.00 | 2.57 |
505 | 506 | 2.801342 | GCTAGCTAGCTTGCCACTACTG | 60.801 | 54.545 | 32.67 | 9.33 | 45.62 | 2.74 |
507 | 508 | 0.107945 | GCTAGCTTGCCACTACTGCT | 60.108 | 55.000 | 9.15 | 0.00 | 37.72 | 4.24 |
508 | 509 | 1.137086 | GCTAGCTTGCCACTACTGCTA | 59.863 | 52.381 | 9.15 | 0.00 | 35.47 | 3.49 |
509 | 510 | 3.090952 | CTAGCTTGCCACTACTGCTAG | 57.909 | 52.381 | 0.00 | 0.00 | 44.36 | 3.42 |
510 | 511 | 1.270907 | AGCTTGCCACTACTGCTAGT | 58.729 | 50.000 | 0.00 | 0.00 | 34.66 | 2.57 |
511 | 512 | 2.457598 | AGCTTGCCACTACTGCTAGTA | 58.542 | 47.619 | 0.00 | 0.00 | 34.66 | 1.82 |
512 | 513 | 3.034635 | AGCTTGCCACTACTGCTAGTAT | 58.965 | 45.455 | 0.00 | 0.00 | 34.66 | 2.12 |
513 | 514 | 4.215908 | AGCTTGCCACTACTGCTAGTATA | 58.784 | 43.478 | 0.00 | 0.00 | 34.66 | 1.47 |
514 | 515 | 4.835615 | AGCTTGCCACTACTGCTAGTATAT | 59.164 | 41.667 | 0.00 | 0.00 | 34.66 | 0.86 |
547 | 548 | 4.876107 | TGGATAAGAAAATTCGAGCAGGTC | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
579 | 582 | 1.975407 | CTGCCACCTTCCCAAGCTG | 60.975 | 63.158 | 0.00 | 0.00 | 0.00 | 4.24 |
630 | 633 | 0.173708 | GAGACGTTGAGGCCCTGTAG | 59.826 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
631 | 634 | 1.448013 | GACGTTGAGGCCCTGTAGC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 3.58 |
632 | 635 | 1.889530 | GACGTTGAGGCCCTGTAGCT | 61.890 | 60.000 | 0.00 | 0.00 | 0.00 | 3.32 |
634 | 637 | 1.153549 | GTTGAGGCCCTGTAGCTCG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 5.03 |
635 | 638 | 1.304962 | TTGAGGCCCTGTAGCTCGA | 60.305 | 57.895 | 0.00 | 0.00 | 0.00 | 4.04 |
984 | 995 | 0.968405 | TGGTTTCTTGCATCAAGGGC | 59.032 | 50.000 | 6.71 | 0.00 | 41.33 | 5.19 |
1452 | 1471 | 2.045524 | GCCATGAGGGAGATCTTCAGA | 58.954 | 52.381 | 2.72 | 0.00 | 40.01 | 3.27 |
1552 | 1571 | 1.140852 | TCACCAAGGACCTCAACTGTG | 59.859 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
1557 | 1576 | 0.037303 | AGGACCTCAACTGTGCCATG | 59.963 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1594 | 1613 | 1.136500 | AGTATCCGACCTCCTTTTCGC | 59.864 | 52.381 | 0.00 | 0.00 | 33.78 | 4.70 |
1602 | 1621 | 1.302832 | CTCCTTTTCGCCTGGCTGT | 60.303 | 57.895 | 17.92 | 0.00 | 0.00 | 4.40 |
1603 | 1622 | 1.580845 | CTCCTTTTCGCCTGGCTGTG | 61.581 | 60.000 | 17.92 | 0.88 | 0.00 | 3.66 |
1604 | 1623 | 1.898574 | CCTTTTCGCCTGGCTGTGT | 60.899 | 57.895 | 17.92 | 0.00 | 0.00 | 3.72 |
1697 | 1807 | 2.676839 | CTCAGTGTGGAATCATCAGTGC | 59.323 | 50.000 | 6.79 | 0.00 | 33.95 | 4.40 |
1848 | 2153 | 0.175760 | TCTATGCTCGGCTTGGTGTC | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1852 | 2157 | 1.185618 | TGCTCGGCTTGGTGTCTACT | 61.186 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1854 | 2159 | 1.469423 | GCTCGGCTTGGTGTCTACTAC | 60.469 | 57.143 | 0.00 | 0.00 | 0.00 | 2.73 |
1856 | 2161 | 0.806868 | CGGCTTGGTGTCTACTACGA | 59.193 | 55.000 | 0.00 | 0.00 | 0.00 | 3.43 |
1857 | 2162 | 1.404391 | CGGCTTGGTGTCTACTACGAT | 59.596 | 52.381 | 0.00 | 0.00 | 0.00 | 3.73 |
1858 | 2163 | 2.794981 | CGGCTTGGTGTCTACTACGATG | 60.795 | 54.545 | 0.00 | 0.00 | 0.00 | 3.84 |
1859 | 2164 | 2.194271 | GCTTGGTGTCTACTACGATGC | 58.806 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
1860 | 2165 | 2.416836 | GCTTGGTGTCTACTACGATGCA | 60.417 | 50.000 | 0.00 | 0.00 | 30.82 | 3.96 |
1861 | 2166 | 3.738281 | GCTTGGTGTCTACTACGATGCAT | 60.738 | 47.826 | 0.00 | 0.00 | 30.82 | 3.96 |
1862 | 2167 | 3.436700 | TGGTGTCTACTACGATGCATG | 57.563 | 47.619 | 2.46 | 0.00 | 0.00 | 4.06 |
1863 | 2168 | 2.758423 | TGGTGTCTACTACGATGCATGT | 59.242 | 45.455 | 2.46 | 5.42 | 0.00 | 3.21 |
1864 | 2169 | 3.949113 | TGGTGTCTACTACGATGCATGTA | 59.051 | 43.478 | 2.46 | 6.38 | 0.00 | 2.29 |
1937 | 2242 | 9.352191 | AGTCATTATGGTATACGACTTCTAGTT | 57.648 | 33.333 | 3.78 | 0.00 | 29.68 | 2.24 |
1967 | 2272 | 4.859691 | AGTTTTATACCCCTACCCCAAGTT | 59.140 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
2028 | 2333 | 6.292488 | CCAAATCATCAACAAGCAACAGTTTC | 60.292 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
2076 | 2381 | 2.371179 | GGTCCTAGGGTTTAGGGTATGC | 59.629 | 54.545 | 9.46 | 0.00 | 35.45 | 3.14 |
2084 | 2389 | 0.983905 | TTTAGGGTATGCCTCCGCCA | 60.984 | 55.000 | 0.00 | 0.00 | 34.45 | 5.69 |
2085 | 2390 | 0.983905 | TTAGGGTATGCCTCCGCCAA | 60.984 | 55.000 | 0.00 | 0.00 | 34.45 | 4.52 |
2086 | 2391 | 1.692173 | TAGGGTATGCCTCCGCCAAC | 61.692 | 60.000 | 0.00 | 0.00 | 34.45 | 3.77 |
2306 | 2617 | 1.143183 | CGCCGCCCACAACTACTAT | 59.857 | 57.895 | 0.00 | 0.00 | 0.00 | 2.12 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 4.928661 | ATCAAAGTCGTACATGTGAAGC | 57.071 | 40.909 | 9.11 | 0.00 | 0.00 | 3.86 |
1 | 2 | 7.201444 | GGAAGTATCAAAGTCGTACATGTGAAG | 60.201 | 40.741 | 9.11 | 0.00 | 0.00 | 3.02 |
3 | 4 | 6.097356 | GGAAGTATCAAAGTCGTACATGTGA | 58.903 | 40.000 | 9.11 | 0.00 | 0.00 | 3.58 |
4 | 5 | 5.004440 | CGGAAGTATCAAAGTCGTACATGTG | 59.996 | 44.000 | 9.11 | 0.00 | 0.00 | 3.21 |
5 | 6 | 5.100259 | CGGAAGTATCAAAGTCGTACATGT | 58.900 | 41.667 | 2.69 | 2.69 | 0.00 | 3.21 |
6 | 7 | 4.026804 | GCGGAAGTATCAAAGTCGTACATG | 60.027 | 45.833 | 0.00 | 0.00 | 0.00 | 3.21 |
7 | 8 | 4.110482 | GCGGAAGTATCAAAGTCGTACAT | 58.890 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
8 | 9 | 3.192001 | AGCGGAAGTATCAAAGTCGTACA | 59.808 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
9 | 10 | 3.767278 | AGCGGAAGTATCAAAGTCGTAC | 58.233 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
10 | 11 | 4.171005 | CAAGCGGAAGTATCAAAGTCGTA | 58.829 | 43.478 | 0.00 | 0.00 | 0.00 | 3.43 |
11 | 12 | 2.993899 | CAAGCGGAAGTATCAAAGTCGT | 59.006 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
12 | 13 | 2.348666 | CCAAGCGGAAGTATCAAAGTCG | 59.651 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
13 | 14 | 2.096013 | GCCAAGCGGAAGTATCAAAGTC | 59.904 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
14 | 15 | 2.084546 | GCCAAGCGGAAGTATCAAAGT | 58.915 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
15 | 16 | 2.083774 | TGCCAAGCGGAAGTATCAAAG | 58.916 | 47.619 | 0.00 | 0.00 | 0.00 | 2.77 |
16 | 17 | 1.810151 | GTGCCAAGCGGAAGTATCAAA | 59.190 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
17 | 18 | 1.003118 | AGTGCCAAGCGGAAGTATCAA | 59.997 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
18 | 19 | 0.613260 | AGTGCCAAGCGGAAGTATCA | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
19 | 20 | 1.398390 | CAAGTGCCAAGCGGAAGTATC | 59.602 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
20 | 21 | 1.271379 | ACAAGTGCCAAGCGGAAGTAT | 60.271 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
21 | 22 | 0.107831 | ACAAGTGCCAAGCGGAAGTA | 59.892 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
22 | 23 | 0.751643 | AACAAGTGCCAAGCGGAAGT | 60.752 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
23 | 24 | 0.040067 | GAACAAGTGCCAAGCGGAAG | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
24 | 25 | 1.781025 | CGAACAAGTGCCAAGCGGAA | 61.781 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
25 | 26 | 2.250939 | CGAACAAGTGCCAAGCGGA | 61.251 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
26 | 27 | 2.250939 | TCGAACAAGTGCCAAGCGG | 61.251 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
27 | 28 | 1.082756 | GTCGAACAAGTGCCAAGCG | 60.083 | 57.895 | 0.00 | 0.00 | 0.00 | 4.68 |
28 | 29 | 0.235926 | GAGTCGAACAAGTGCCAAGC | 59.764 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
29 | 30 | 0.868406 | GGAGTCGAACAAGTGCCAAG | 59.132 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
30 | 31 | 0.534203 | GGGAGTCGAACAAGTGCCAA | 60.534 | 55.000 | 0.00 | 0.00 | 30.80 | 4.52 |
31 | 32 | 1.070786 | GGGAGTCGAACAAGTGCCA | 59.929 | 57.895 | 0.00 | 0.00 | 30.80 | 4.92 |
32 | 33 | 2.027625 | CGGGAGTCGAACAAGTGCC | 61.028 | 63.158 | 0.00 | 0.00 | 42.43 | 5.01 |
33 | 34 | 1.300697 | ACGGGAGTCGAACAAGTGC | 60.301 | 57.895 | 0.00 | 0.00 | 40.62 | 4.40 |
89 | 90 | 1.794222 | CCTTCACATTTCGGTCGCC | 59.206 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
90 | 91 | 1.134694 | GCCTTCACATTTCGGTCGC | 59.865 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
91 | 92 | 1.062587 | GATGCCTTCACATTTCGGTCG | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
92 | 93 | 2.083774 | TGATGCCTTCACATTTCGGTC | 58.916 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
93 | 94 | 2.198827 | TGATGCCTTCACATTTCGGT | 57.801 | 45.000 | 0.00 | 0.00 | 0.00 | 4.69 |
94 | 95 | 3.788333 | ATTGATGCCTTCACATTTCGG | 57.212 | 42.857 | 0.00 | 0.00 | 32.84 | 4.30 |
95 | 96 | 5.639757 | TGTAATTGATGCCTTCACATTTCG | 58.360 | 37.500 | 0.00 | 0.00 | 32.84 | 3.46 |
96 | 97 | 7.464977 | GCATTGTAATTGATGCCTTCACATTTC | 60.465 | 37.037 | 10.45 | 0.00 | 42.09 | 2.17 |
97 | 98 | 6.314400 | GCATTGTAATTGATGCCTTCACATTT | 59.686 | 34.615 | 10.45 | 0.00 | 42.09 | 2.32 |
98 | 99 | 5.813672 | GCATTGTAATTGATGCCTTCACATT | 59.186 | 36.000 | 10.45 | 0.00 | 42.09 | 2.71 |
99 | 100 | 5.353938 | GCATTGTAATTGATGCCTTCACAT | 58.646 | 37.500 | 10.45 | 0.00 | 42.09 | 3.21 |
100 | 101 | 4.746729 | GCATTGTAATTGATGCCTTCACA | 58.253 | 39.130 | 10.45 | 0.00 | 42.09 | 3.58 |
107 | 108 | 4.266029 | CGAAACCAGCATTGTAATTGATGC | 59.734 | 41.667 | 12.60 | 12.60 | 46.88 | 3.91 |
108 | 109 | 5.286797 | CACGAAACCAGCATTGTAATTGATG | 59.713 | 40.000 | 0.00 | 0.00 | 0.00 | 3.07 |
109 | 110 | 5.401550 | CACGAAACCAGCATTGTAATTGAT | 58.598 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
110 | 111 | 4.320861 | CCACGAAACCAGCATTGTAATTGA | 60.321 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
111 | 112 | 3.919804 | CCACGAAACCAGCATTGTAATTG | 59.080 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
112 | 113 | 3.056891 | CCCACGAAACCAGCATTGTAATT | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
113 | 114 | 2.491693 | CCCACGAAACCAGCATTGTAAT | 59.508 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
114 | 115 | 1.883275 | CCCACGAAACCAGCATTGTAA | 59.117 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
115 | 116 | 1.202830 | ACCCACGAAACCAGCATTGTA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
116 | 117 | 0.467290 | ACCCACGAAACCAGCATTGT | 60.467 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
117 | 118 | 0.673437 | AACCCACGAAACCAGCATTG | 59.327 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
118 | 119 | 2.279935 | TAACCCACGAAACCAGCATT | 57.720 | 45.000 | 0.00 | 0.00 | 0.00 | 3.56 |
119 | 120 | 2.026262 | AGATAACCCACGAAACCAGCAT | 60.026 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
120 | 121 | 1.349688 | AGATAACCCACGAAACCAGCA | 59.650 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
121 | 122 | 1.737793 | CAGATAACCCACGAAACCAGC | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
122 | 123 | 2.027561 | TCCAGATAACCCACGAAACCAG | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
123 | 124 | 1.979308 | TCCAGATAACCCACGAAACCA | 59.021 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
124 | 125 | 2.745821 | GTTCCAGATAACCCACGAAACC | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
125 | 126 | 2.414138 | CGTTCCAGATAACCCACGAAAC | 59.586 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
126 | 127 | 2.299582 | TCGTTCCAGATAACCCACGAAA | 59.700 | 45.455 | 0.00 | 0.00 | 33.94 | 3.46 |
127 | 128 | 1.894466 | TCGTTCCAGATAACCCACGAA | 59.106 | 47.619 | 0.00 | 0.00 | 33.94 | 3.85 |
128 | 129 | 1.475280 | CTCGTTCCAGATAACCCACGA | 59.525 | 52.381 | 0.00 | 0.00 | 35.49 | 4.35 |
129 | 130 | 1.922570 | CTCGTTCCAGATAACCCACG | 58.077 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
130 | 131 | 1.207329 | AGCTCGTTCCAGATAACCCAC | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
131 | 132 | 1.568504 | AGCTCGTTCCAGATAACCCA | 58.431 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
132 | 133 | 2.693267 | AAGCTCGTTCCAGATAACCC | 57.307 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
133 | 134 | 4.024809 | GCATTAAGCTCGTTCCAGATAACC | 60.025 | 45.833 | 0.00 | 0.00 | 41.15 | 2.85 |
134 | 135 | 4.570772 | TGCATTAAGCTCGTTCCAGATAAC | 59.429 | 41.667 | 0.00 | 0.00 | 45.94 | 1.89 |
135 | 136 | 4.765273 | TGCATTAAGCTCGTTCCAGATAA | 58.235 | 39.130 | 0.00 | 0.00 | 45.94 | 1.75 |
136 | 137 | 4.400529 | TGCATTAAGCTCGTTCCAGATA | 57.599 | 40.909 | 0.00 | 0.00 | 45.94 | 1.98 |
137 | 138 | 3.266510 | TGCATTAAGCTCGTTCCAGAT | 57.733 | 42.857 | 0.00 | 0.00 | 45.94 | 2.90 |
138 | 139 | 2.760634 | TGCATTAAGCTCGTTCCAGA | 57.239 | 45.000 | 0.00 | 0.00 | 45.94 | 3.86 |
139 | 140 | 2.096496 | CCTTGCATTAAGCTCGTTCCAG | 59.904 | 50.000 | 0.00 | 0.00 | 45.94 | 3.86 |
140 | 141 | 2.083774 | CCTTGCATTAAGCTCGTTCCA | 58.916 | 47.619 | 0.00 | 0.00 | 45.94 | 3.53 |
141 | 142 | 2.084546 | ACCTTGCATTAAGCTCGTTCC | 58.915 | 47.619 | 0.00 | 0.00 | 45.94 | 3.62 |
142 | 143 | 3.831715 | AACCTTGCATTAAGCTCGTTC | 57.168 | 42.857 | 0.00 | 0.00 | 45.94 | 3.95 |
143 | 144 | 3.364964 | CGAAACCTTGCATTAAGCTCGTT | 60.365 | 43.478 | 0.00 | 0.00 | 45.94 | 3.85 |
144 | 145 | 2.159627 | CGAAACCTTGCATTAAGCTCGT | 59.840 | 45.455 | 0.00 | 0.00 | 45.94 | 4.18 |
145 | 146 | 2.476185 | CCGAAACCTTGCATTAAGCTCG | 60.476 | 50.000 | 0.00 | 0.00 | 45.94 | 5.03 |
146 | 147 | 2.732282 | GCCGAAACCTTGCATTAAGCTC | 60.732 | 50.000 | 0.00 | 0.00 | 45.94 | 4.09 |
147 | 148 | 1.202348 | GCCGAAACCTTGCATTAAGCT | 59.798 | 47.619 | 0.00 | 0.00 | 45.94 | 3.74 |
148 | 149 | 1.067915 | TGCCGAAACCTTGCATTAAGC | 60.068 | 47.619 | 0.00 | 0.00 | 45.96 | 3.09 |
149 | 150 | 3.508744 | ATGCCGAAACCTTGCATTAAG | 57.491 | 42.857 | 0.00 | 0.00 | 42.79 | 1.85 |
150 | 151 | 4.702612 | TCTTATGCCGAAACCTTGCATTAA | 59.297 | 37.500 | 1.19 | 0.00 | 42.79 | 1.40 |
151 | 152 | 4.265893 | TCTTATGCCGAAACCTTGCATTA | 58.734 | 39.130 | 1.19 | 0.00 | 42.79 | 1.90 |
152 | 153 | 3.088532 | TCTTATGCCGAAACCTTGCATT | 58.911 | 40.909 | 1.19 | 0.00 | 42.79 | 3.56 |
153 | 154 | 2.684881 | CTCTTATGCCGAAACCTTGCAT | 59.315 | 45.455 | 0.00 | 0.00 | 46.68 | 3.96 |
154 | 155 | 2.083774 | CTCTTATGCCGAAACCTTGCA | 58.916 | 47.619 | 0.00 | 0.00 | 39.68 | 4.08 |
155 | 156 | 1.202188 | GCTCTTATGCCGAAACCTTGC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
156 | 157 | 1.062587 | CGCTCTTATGCCGAAACCTTG | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
157 | 158 | 1.369625 | CGCTCTTATGCCGAAACCTT | 58.630 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
158 | 159 | 1.090052 | GCGCTCTTATGCCGAAACCT | 61.090 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
159 | 160 | 1.352056 | GCGCTCTTATGCCGAAACC | 59.648 | 57.895 | 0.00 | 0.00 | 0.00 | 3.27 |
160 | 161 | 0.657840 | ATGCGCTCTTATGCCGAAAC | 59.342 | 50.000 | 9.73 | 0.00 | 0.00 | 2.78 |
161 | 162 | 0.937304 | GATGCGCTCTTATGCCGAAA | 59.063 | 50.000 | 9.73 | 0.00 | 0.00 | 3.46 |
162 | 163 | 0.179086 | TGATGCGCTCTTATGCCGAA | 60.179 | 50.000 | 9.73 | 0.00 | 0.00 | 4.30 |
163 | 164 | 0.875908 | GTGATGCGCTCTTATGCCGA | 60.876 | 55.000 | 9.73 | 0.00 | 0.00 | 5.54 |
164 | 165 | 1.566563 | GTGATGCGCTCTTATGCCG | 59.433 | 57.895 | 9.73 | 0.00 | 0.00 | 5.69 |
165 | 166 | 1.835483 | CGGTGATGCGCTCTTATGCC | 61.835 | 60.000 | 9.73 | 0.84 | 0.00 | 4.40 |
166 | 167 | 1.566563 | CGGTGATGCGCTCTTATGC | 59.433 | 57.895 | 9.73 | 0.00 | 0.00 | 3.14 |
167 | 168 | 1.153597 | TGCGGTGATGCGCTCTTATG | 61.154 | 55.000 | 9.73 | 0.00 | 37.81 | 1.90 |
168 | 169 | 0.461870 | TTGCGGTGATGCGCTCTTAT | 60.462 | 50.000 | 9.73 | 0.00 | 37.81 | 1.73 |
169 | 170 | 0.672091 | TTTGCGGTGATGCGCTCTTA | 60.672 | 50.000 | 9.73 | 0.00 | 37.81 | 2.10 |
170 | 171 | 1.308069 | ATTTGCGGTGATGCGCTCTT | 61.308 | 50.000 | 9.73 | 0.00 | 37.81 | 2.85 |
171 | 172 | 1.709147 | GATTTGCGGTGATGCGCTCT | 61.709 | 55.000 | 9.73 | 0.00 | 37.81 | 4.09 |
172 | 173 | 1.297893 | GATTTGCGGTGATGCGCTC | 60.298 | 57.895 | 9.73 | 4.27 | 37.81 | 5.03 |
173 | 174 | 2.764314 | GGATTTGCGGTGATGCGCT | 61.764 | 57.895 | 9.73 | 0.00 | 37.81 | 5.92 |
174 | 175 | 1.436195 | TAGGATTTGCGGTGATGCGC | 61.436 | 55.000 | 0.00 | 0.00 | 37.81 | 6.09 |
175 | 176 | 0.304705 | GTAGGATTTGCGGTGATGCG | 59.695 | 55.000 | 0.00 | 0.00 | 37.81 | 4.73 |
176 | 177 | 1.599542 | GAGTAGGATTTGCGGTGATGC | 59.400 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
177 | 178 | 2.905075 | TGAGTAGGATTTGCGGTGATG | 58.095 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
178 | 179 | 3.270877 | GTTGAGTAGGATTTGCGGTGAT | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
179 | 180 | 2.037902 | TGTTGAGTAGGATTTGCGGTGA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
180 | 181 | 2.159627 | GTGTTGAGTAGGATTTGCGGTG | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
181 | 182 | 2.423577 | GTGTTGAGTAGGATTTGCGGT | 58.576 | 47.619 | 0.00 | 0.00 | 0.00 | 5.68 |
182 | 183 | 1.737793 | GGTGTTGAGTAGGATTTGCGG | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
183 | 184 | 2.422597 | TGGTGTTGAGTAGGATTTGCG | 58.577 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
184 | 185 | 4.009675 | TGATGGTGTTGAGTAGGATTTGC | 58.990 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
185 | 186 | 5.007039 | CGATGATGGTGTTGAGTAGGATTTG | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
186 | 187 | 5.104941 | TCGATGATGGTGTTGAGTAGGATTT | 60.105 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
187 | 188 | 4.405680 | TCGATGATGGTGTTGAGTAGGATT | 59.594 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
188 | 189 | 3.960755 | TCGATGATGGTGTTGAGTAGGAT | 59.039 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
189 | 190 | 3.361786 | TCGATGATGGTGTTGAGTAGGA | 58.638 | 45.455 | 0.00 | 0.00 | 0.00 | 2.94 |
190 | 191 | 3.801114 | TCGATGATGGTGTTGAGTAGG | 57.199 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
191 | 192 | 4.936891 | TCATCGATGATGGTGTTGAGTAG | 58.063 | 43.478 | 23.99 | 0.00 | 40.15 | 2.57 |
192 | 193 | 4.644685 | TCTCATCGATGATGGTGTTGAGTA | 59.355 | 41.667 | 27.43 | 1.59 | 40.15 | 2.59 |
193 | 194 | 3.448660 | TCTCATCGATGATGGTGTTGAGT | 59.551 | 43.478 | 27.43 | 0.00 | 40.15 | 3.41 |
194 | 195 | 3.801050 | GTCTCATCGATGATGGTGTTGAG | 59.199 | 47.826 | 27.43 | 13.79 | 40.15 | 3.02 |
195 | 196 | 3.195396 | TGTCTCATCGATGATGGTGTTGA | 59.805 | 43.478 | 27.43 | 16.41 | 40.15 | 3.18 |
196 | 197 | 3.524541 | TGTCTCATCGATGATGGTGTTG | 58.475 | 45.455 | 27.43 | 14.40 | 40.15 | 3.33 |
197 | 198 | 3.893326 | TGTCTCATCGATGATGGTGTT | 57.107 | 42.857 | 27.43 | 0.00 | 40.15 | 3.32 |
198 | 199 | 3.893326 | TTGTCTCATCGATGATGGTGT | 57.107 | 42.857 | 27.43 | 0.00 | 40.15 | 4.16 |
199 | 200 | 3.310774 | GGTTTGTCTCATCGATGATGGTG | 59.689 | 47.826 | 27.43 | 16.15 | 40.15 | 4.17 |
200 | 201 | 3.198635 | AGGTTTGTCTCATCGATGATGGT | 59.801 | 43.478 | 27.43 | 5.16 | 40.15 | 3.55 |
201 | 202 | 3.801698 | AGGTTTGTCTCATCGATGATGG | 58.198 | 45.455 | 27.43 | 17.21 | 40.15 | 3.51 |
202 | 203 | 5.448225 | CCAAAGGTTTGTCTCATCGATGATG | 60.448 | 44.000 | 27.43 | 20.16 | 37.63 | 3.07 |
203 | 204 | 4.637534 | CCAAAGGTTTGTCTCATCGATGAT | 59.362 | 41.667 | 27.43 | 8.27 | 34.87 | 2.45 |
204 | 205 | 4.002982 | CCAAAGGTTTGTCTCATCGATGA | 58.997 | 43.478 | 25.80 | 25.80 | 36.45 | 2.92 |
205 | 206 | 3.127548 | CCCAAAGGTTTGTCTCATCGATG | 59.872 | 47.826 | 19.61 | 19.61 | 36.45 | 3.84 |
206 | 207 | 3.347216 | CCCAAAGGTTTGTCTCATCGAT | 58.653 | 45.455 | 0.00 | 0.00 | 36.45 | 3.59 |
207 | 208 | 2.778299 | CCCAAAGGTTTGTCTCATCGA | 58.222 | 47.619 | 1.94 | 0.00 | 36.45 | 3.59 |
232 | 233 | 1.444917 | CTAATTTCTTCGCCCCGGCC | 61.445 | 60.000 | 0.00 | 0.00 | 37.98 | 6.13 |
233 | 234 | 1.444917 | CCTAATTTCTTCGCCCCGGC | 61.445 | 60.000 | 0.00 | 0.00 | 37.85 | 6.13 |
234 | 235 | 0.818040 | CCCTAATTTCTTCGCCCCGG | 60.818 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
235 | 236 | 0.107361 | ACCCTAATTTCTTCGCCCCG | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
236 | 237 | 1.212195 | AGACCCTAATTTCTTCGCCCC | 59.788 | 52.381 | 0.00 | 0.00 | 0.00 | 5.80 |
237 | 238 | 2.711978 | AGACCCTAATTTCTTCGCCC | 57.288 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
238 | 239 | 5.386958 | AAAAAGACCCTAATTTCTTCGCC | 57.613 | 39.130 | 0.00 | 0.00 | 30.55 | 5.54 |
257 | 258 | 8.806634 | GCATGACAATTATTCTCGCAATAAAAA | 58.193 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
258 | 259 | 7.434897 | GGCATGACAATTATTCTCGCAATAAAA | 59.565 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
259 | 260 | 6.917477 | GGCATGACAATTATTCTCGCAATAAA | 59.083 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
260 | 261 | 6.437928 | GGCATGACAATTATTCTCGCAATAA | 58.562 | 36.000 | 0.00 | 2.88 | 0.00 | 1.40 |
261 | 262 | 5.334028 | CGGCATGACAATTATTCTCGCAATA | 60.334 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
262 | 263 | 4.555313 | CGGCATGACAATTATTCTCGCAAT | 60.555 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
263 | 264 | 3.242706 | CGGCATGACAATTATTCTCGCAA | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
264 | 265 | 2.287644 | CGGCATGACAATTATTCTCGCA | 59.712 | 45.455 | 0.00 | 0.00 | 0.00 | 5.10 |
265 | 266 | 2.543848 | TCGGCATGACAATTATTCTCGC | 59.456 | 45.455 | 0.00 | 0.00 | 0.00 | 5.03 |
266 | 267 | 4.997905 | ATCGGCATGACAATTATTCTCG | 57.002 | 40.909 | 0.00 | 0.00 | 0.00 | 4.04 |
267 | 268 | 6.551385 | AGAATCGGCATGACAATTATTCTC | 57.449 | 37.500 | 0.00 | 0.00 | 28.65 | 2.87 |
268 | 269 | 6.238842 | CCAAGAATCGGCATGACAATTATTCT | 60.239 | 38.462 | 0.00 | 4.57 | 34.55 | 2.40 |
269 | 270 | 5.916883 | CCAAGAATCGGCATGACAATTATTC | 59.083 | 40.000 | 0.00 | 2.17 | 0.00 | 1.75 |
270 | 271 | 5.835257 | CCAAGAATCGGCATGACAATTATT | 58.165 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
271 | 272 | 5.443185 | CCAAGAATCGGCATGACAATTAT | 57.557 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
272 | 273 | 4.898829 | CCAAGAATCGGCATGACAATTA | 57.101 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
273 | 274 | 3.788333 | CCAAGAATCGGCATGACAATT | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
283 | 284 | 1.069022 | CAACACACAGCCAAGAATCGG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
284 | 285 | 1.603802 | ACAACACACAGCCAAGAATCG | 59.396 | 47.619 | 0.00 | 0.00 | 0.00 | 3.34 |
285 | 286 | 4.036262 | TGTTACAACACACAGCCAAGAATC | 59.964 | 41.667 | 0.00 | 0.00 | 33.17 | 2.52 |
286 | 287 | 3.951037 | TGTTACAACACACAGCCAAGAAT | 59.049 | 39.130 | 0.00 | 0.00 | 33.17 | 2.40 |
287 | 288 | 3.348119 | TGTTACAACACACAGCCAAGAA | 58.652 | 40.909 | 0.00 | 0.00 | 33.17 | 2.52 |
288 | 289 | 2.992593 | TGTTACAACACACAGCCAAGA | 58.007 | 42.857 | 0.00 | 0.00 | 33.17 | 3.02 |
289 | 290 | 3.773860 | TTGTTACAACACACAGCCAAG | 57.226 | 42.857 | 0.00 | 0.00 | 38.92 | 3.61 |
290 | 291 | 3.508012 | AGTTTGTTACAACACACAGCCAA | 59.492 | 39.130 | 12.48 | 0.00 | 40.95 | 4.52 |
291 | 292 | 3.085533 | AGTTTGTTACAACACACAGCCA | 58.914 | 40.909 | 12.48 | 0.00 | 40.95 | 4.75 |
292 | 293 | 3.377172 | AGAGTTTGTTACAACACACAGCC | 59.623 | 43.478 | 12.48 | 3.45 | 40.95 | 4.85 |
293 | 294 | 4.616181 | AGAGTTTGTTACAACACACAGC | 57.384 | 40.909 | 12.48 | 5.54 | 40.95 | 4.40 |
294 | 295 | 7.061789 | GGAAAAAGAGTTTGTTACAACACACAG | 59.938 | 37.037 | 12.48 | 0.00 | 40.95 | 3.66 |
295 | 296 | 6.864165 | GGAAAAAGAGTTTGTTACAACACACA | 59.136 | 34.615 | 12.48 | 0.00 | 40.95 | 3.72 |
296 | 297 | 7.088272 | AGGAAAAAGAGTTTGTTACAACACAC | 58.912 | 34.615 | 0.00 | 3.70 | 39.30 | 3.82 |
297 | 298 | 7.222000 | AGGAAAAAGAGTTTGTTACAACACA | 57.778 | 32.000 | 0.00 | 0.00 | 38.92 | 3.72 |
298 | 299 | 6.750501 | GGAGGAAAAAGAGTTTGTTACAACAC | 59.249 | 38.462 | 0.00 | 0.12 | 38.92 | 3.32 |
299 | 300 | 6.661805 | AGGAGGAAAAAGAGTTTGTTACAACA | 59.338 | 34.615 | 0.00 | 0.00 | 37.08 | 3.33 |
300 | 301 | 7.096884 | AGGAGGAAAAAGAGTTTGTTACAAC | 57.903 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
301 | 302 | 7.712204 | AAGGAGGAAAAAGAGTTTGTTACAA | 57.288 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
302 | 303 | 8.990163 | ATAAGGAGGAAAAAGAGTTTGTTACA | 57.010 | 30.769 | 0.00 | 0.00 | 0.00 | 2.41 |
326 | 327 | 9.264719 | GCAAAAGCTTTGCCTCATATATTAAAT | 57.735 | 29.630 | 13.54 | 0.00 | 39.38 | 1.40 |
327 | 328 | 8.647143 | GCAAAAGCTTTGCCTCATATATTAAA | 57.353 | 30.769 | 13.54 | 0.00 | 39.38 | 1.52 |
340 | 341 | 3.126686 | TGAAACAAAGGCAAAAGCTTTGC | 59.873 | 39.130 | 13.54 | 17.13 | 44.22 | 3.68 |
341 | 342 | 4.943142 | TGAAACAAAGGCAAAAGCTTTG | 57.057 | 36.364 | 13.54 | 8.26 | 42.01 | 2.77 |
342 | 343 | 5.956068 | TTTGAAACAAAGGCAAAAGCTTT | 57.044 | 30.435 | 5.69 | 5.69 | 0.00 | 3.51 |
343 | 344 | 5.956068 | TTTTGAAACAAAGGCAAAAGCTT | 57.044 | 30.435 | 0.00 | 0.00 | 36.80 | 3.74 |
344 | 345 | 5.956068 | TTTTTGAAACAAAGGCAAAAGCT | 57.044 | 30.435 | 0.00 | 0.00 | 41.02 | 3.74 |
367 | 368 | 8.526978 | GCTTCTATTTTTCCTCTCCAGATTTTT | 58.473 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
368 | 369 | 7.671398 | TGCTTCTATTTTTCCTCTCCAGATTTT | 59.329 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
369 | 370 | 7.177878 | TGCTTCTATTTTTCCTCTCCAGATTT | 58.822 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
370 | 371 | 6.725364 | TGCTTCTATTTTTCCTCTCCAGATT | 58.275 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
371 | 372 | 6.319048 | TGCTTCTATTTTTCCTCTCCAGAT | 57.681 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
372 | 373 | 5.762179 | TGCTTCTATTTTTCCTCTCCAGA | 57.238 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
373 | 374 | 6.183360 | CCATTGCTTCTATTTTTCCTCTCCAG | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
374 | 375 | 5.653769 | CCATTGCTTCTATTTTTCCTCTCCA | 59.346 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
375 | 376 | 5.451103 | GCCATTGCTTCTATTTTTCCTCTCC | 60.451 | 44.000 | 0.00 | 0.00 | 33.53 | 3.71 |
376 | 377 | 5.126061 | TGCCATTGCTTCTATTTTTCCTCTC | 59.874 | 40.000 | 0.00 | 0.00 | 38.71 | 3.20 |
377 | 378 | 5.018809 | TGCCATTGCTTCTATTTTTCCTCT | 58.981 | 37.500 | 0.00 | 0.00 | 38.71 | 3.69 |
378 | 379 | 5.105063 | GTGCCATTGCTTCTATTTTTCCTC | 58.895 | 41.667 | 0.00 | 0.00 | 38.71 | 3.71 |
379 | 380 | 4.081476 | GGTGCCATTGCTTCTATTTTTCCT | 60.081 | 41.667 | 0.00 | 0.00 | 38.71 | 3.36 |
380 | 381 | 4.183865 | GGTGCCATTGCTTCTATTTTTCC | 58.816 | 43.478 | 0.00 | 0.00 | 38.71 | 3.13 |
381 | 382 | 4.627035 | GTGGTGCCATTGCTTCTATTTTTC | 59.373 | 41.667 | 0.00 | 0.00 | 38.71 | 2.29 |
382 | 383 | 4.284234 | AGTGGTGCCATTGCTTCTATTTTT | 59.716 | 37.500 | 0.00 | 0.00 | 38.71 | 1.94 |
383 | 384 | 3.834231 | AGTGGTGCCATTGCTTCTATTTT | 59.166 | 39.130 | 0.00 | 0.00 | 38.71 | 1.82 |
384 | 385 | 3.194116 | CAGTGGTGCCATTGCTTCTATTT | 59.806 | 43.478 | 0.82 | 0.00 | 38.71 | 1.40 |
385 | 386 | 2.756760 | CAGTGGTGCCATTGCTTCTATT | 59.243 | 45.455 | 0.82 | 0.00 | 38.71 | 1.73 |
386 | 387 | 2.025981 | TCAGTGGTGCCATTGCTTCTAT | 60.026 | 45.455 | 8.61 | 0.00 | 38.71 | 1.98 |
387 | 388 | 1.350684 | TCAGTGGTGCCATTGCTTCTA | 59.649 | 47.619 | 8.61 | 0.00 | 38.71 | 2.10 |
388 | 389 | 0.111061 | TCAGTGGTGCCATTGCTTCT | 59.889 | 50.000 | 8.61 | 0.00 | 38.71 | 2.85 |
389 | 390 | 0.961019 | TTCAGTGGTGCCATTGCTTC | 59.039 | 50.000 | 8.61 | 0.00 | 38.71 | 3.86 |
390 | 391 | 1.342174 | CTTTCAGTGGTGCCATTGCTT | 59.658 | 47.619 | 8.61 | 0.00 | 38.71 | 3.91 |
391 | 392 | 0.963962 | CTTTCAGTGGTGCCATTGCT | 59.036 | 50.000 | 8.61 | 0.00 | 38.71 | 3.91 |
392 | 393 | 0.668401 | GCTTTCAGTGGTGCCATTGC | 60.668 | 55.000 | 8.61 | 0.00 | 34.30 | 3.56 |
393 | 394 | 0.963962 | AGCTTTCAGTGGTGCCATTG | 59.036 | 50.000 | 7.32 | 7.32 | 35.39 | 2.82 |
394 | 395 | 0.963962 | CAGCTTTCAGTGGTGCCATT | 59.036 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
395 | 396 | 0.111061 | TCAGCTTTCAGTGGTGCCAT | 59.889 | 50.000 | 0.00 | 0.00 | 33.48 | 4.40 |
396 | 397 | 0.535780 | CTCAGCTTTCAGTGGTGCCA | 60.536 | 55.000 | 0.00 | 0.00 | 33.48 | 4.92 |
397 | 398 | 0.250467 | TCTCAGCTTTCAGTGGTGCC | 60.250 | 55.000 | 0.00 | 0.00 | 33.48 | 5.01 |
398 | 399 | 0.871057 | GTCTCAGCTTTCAGTGGTGC | 59.129 | 55.000 | 0.00 | 0.00 | 33.48 | 5.01 |
399 | 400 | 1.202687 | TGGTCTCAGCTTTCAGTGGTG | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
400 | 401 | 1.131638 | TGGTCTCAGCTTTCAGTGGT | 58.868 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
401 | 402 | 2.082231 | CATGGTCTCAGCTTTCAGTGG | 58.918 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
402 | 403 | 1.467734 | GCATGGTCTCAGCTTTCAGTG | 59.532 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
403 | 404 | 1.072806 | TGCATGGTCTCAGCTTTCAGT | 59.927 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
404 | 405 | 1.817357 | TGCATGGTCTCAGCTTTCAG | 58.183 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
405 | 406 | 2.089201 | CATGCATGGTCTCAGCTTTCA | 58.911 | 47.619 | 19.40 | 0.00 | 0.00 | 2.69 |
406 | 407 | 1.202268 | GCATGCATGGTCTCAGCTTTC | 60.202 | 52.381 | 27.34 | 2.90 | 0.00 | 2.62 |
407 | 408 | 0.815734 | GCATGCATGGTCTCAGCTTT | 59.184 | 50.000 | 27.34 | 0.00 | 0.00 | 3.51 |
408 | 409 | 0.323087 | TGCATGCATGGTCTCAGCTT | 60.323 | 50.000 | 27.34 | 0.00 | 0.00 | 3.74 |
409 | 410 | 0.106669 | ATGCATGCATGGTCTCAGCT | 60.107 | 50.000 | 31.74 | 4.69 | 35.03 | 4.24 |
410 | 411 | 1.601166 | TATGCATGCATGGTCTCAGC | 58.399 | 50.000 | 37.43 | 12.10 | 37.82 | 4.26 |
411 | 412 | 4.848562 | ATTTATGCATGCATGGTCTCAG | 57.151 | 40.909 | 37.43 | 0.91 | 37.82 | 3.35 |
412 | 413 | 5.277925 | CGTTATTTATGCATGCATGGTCTCA | 60.278 | 40.000 | 37.43 | 17.97 | 37.82 | 3.27 |
413 | 414 | 5.049474 | TCGTTATTTATGCATGCATGGTCTC | 60.049 | 40.000 | 37.43 | 22.40 | 37.82 | 3.36 |
414 | 415 | 4.821260 | TCGTTATTTATGCATGCATGGTCT | 59.179 | 37.500 | 37.43 | 22.63 | 37.82 | 3.85 |
415 | 416 | 5.107109 | TCGTTATTTATGCATGCATGGTC | 57.893 | 39.130 | 37.43 | 21.08 | 37.82 | 4.02 |
416 | 417 | 4.557296 | GCTCGTTATTTATGCATGCATGGT | 60.557 | 41.667 | 37.43 | 25.37 | 37.82 | 3.55 |
417 | 418 | 3.916172 | GCTCGTTATTTATGCATGCATGG | 59.084 | 43.478 | 37.43 | 19.13 | 37.82 | 3.66 |
418 | 419 | 4.790878 | AGCTCGTTATTTATGCATGCATG | 58.209 | 39.130 | 37.43 | 22.70 | 37.82 | 4.06 |
419 | 420 | 5.443185 | AAGCTCGTTATTTATGCATGCAT | 57.557 | 34.783 | 33.92 | 33.92 | 40.19 | 3.96 |
420 | 421 | 4.898829 | AAGCTCGTTATTTATGCATGCA | 57.101 | 36.364 | 25.04 | 25.04 | 0.00 | 3.96 |
421 | 422 | 6.835914 | AGATAAGCTCGTTATTTATGCATGC | 58.164 | 36.000 | 11.82 | 11.82 | 30.93 | 4.06 |
422 | 423 | 9.322776 | GAAAGATAAGCTCGTTATTTATGCATG | 57.677 | 33.333 | 10.16 | 0.00 | 30.93 | 4.06 |
423 | 424 | 8.507249 | GGAAAGATAAGCTCGTTATTTATGCAT | 58.493 | 33.333 | 3.79 | 3.79 | 30.93 | 3.96 |
424 | 425 | 7.307160 | CGGAAAGATAAGCTCGTTATTTATGCA | 60.307 | 37.037 | 0.00 | 0.00 | 30.93 | 3.96 |
425 | 426 | 7.010023 | CGGAAAGATAAGCTCGTTATTTATGC | 58.990 | 38.462 | 0.00 | 0.00 | 30.93 | 3.14 |
426 | 427 | 8.294341 | TCGGAAAGATAAGCTCGTTATTTATG | 57.706 | 34.615 | 0.00 | 0.00 | 30.93 | 1.90 |
427 | 428 | 9.490379 | AATCGGAAAGATAAGCTCGTTATTTAT | 57.510 | 29.630 | 0.00 | 0.00 | 38.98 | 1.40 |
428 | 429 | 8.882415 | AATCGGAAAGATAAGCTCGTTATTTA | 57.118 | 30.769 | 0.00 | 0.00 | 38.98 | 1.40 |
429 | 430 | 7.787725 | AATCGGAAAGATAAGCTCGTTATTT | 57.212 | 32.000 | 0.00 | 0.00 | 38.98 | 1.40 |
430 | 431 | 8.926710 | CATAATCGGAAAGATAAGCTCGTTATT | 58.073 | 33.333 | 0.00 | 0.00 | 38.98 | 1.40 |
431 | 432 | 8.304596 | TCATAATCGGAAAGATAAGCTCGTTAT | 58.695 | 33.333 | 0.00 | 0.00 | 38.98 | 1.89 |
432 | 433 | 7.654568 | TCATAATCGGAAAGATAAGCTCGTTA | 58.345 | 34.615 | 0.00 | 0.00 | 38.98 | 3.18 |
433 | 434 | 6.513180 | TCATAATCGGAAAGATAAGCTCGTT | 58.487 | 36.000 | 0.00 | 0.00 | 38.98 | 3.85 |
434 | 435 | 6.085555 | TCATAATCGGAAAGATAAGCTCGT | 57.914 | 37.500 | 0.00 | 0.00 | 38.98 | 4.18 |
435 | 436 | 7.588143 | AATCATAATCGGAAAGATAAGCTCG | 57.412 | 36.000 | 0.00 | 0.00 | 38.98 | 5.03 |
438 | 439 | 9.107367 | CGAAAAATCATAATCGGAAAGATAAGC | 57.893 | 33.333 | 0.00 | 0.00 | 38.98 | 3.09 |
439 | 440 | 9.107367 | GCGAAAAATCATAATCGGAAAGATAAG | 57.893 | 33.333 | 0.00 | 0.00 | 38.98 | 1.73 |
440 | 441 | 7.796660 | CGCGAAAAATCATAATCGGAAAGATAA | 59.203 | 33.333 | 0.00 | 0.00 | 38.98 | 1.75 |
441 | 442 | 7.042321 | ACGCGAAAAATCATAATCGGAAAGATA | 60.042 | 33.333 | 15.93 | 0.00 | 38.98 | 1.98 |
442 | 443 | 6.136071 | CGCGAAAAATCATAATCGGAAAGAT | 58.864 | 36.000 | 0.00 | 0.00 | 42.43 | 2.40 |
443 | 444 | 5.064198 | ACGCGAAAAATCATAATCGGAAAGA | 59.936 | 36.000 | 15.93 | 0.00 | 35.91 | 2.52 |
444 | 445 | 5.263185 | ACGCGAAAAATCATAATCGGAAAG | 58.737 | 37.500 | 15.93 | 0.00 | 35.91 | 2.62 |
445 | 446 | 5.224562 | ACGCGAAAAATCATAATCGGAAA | 57.775 | 34.783 | 15.93 | 0.00 | 35.91 | 3.13 |
446 | 447 | 4.868450 | ACGCGAAAAATCATAATCGGAA | 57.132 | 36.364 | 15.93 | 0.00 | 35.91 | 4.30 |
447 | 448 | 5.692654 | TGATACGCGAAAAATCATAATCGGA | 59.307 | 36.000 | 15.93 | 0.00 | 35.91 | 4.55 |
448 | 449 | 5.783654 | GTGATACGCGAAAAATCATAATCGG | 59.216 | 40.000 | 15.93 | 0.00 | 35.91 | 4.18 |
449 | 450 | 6.351749 | TGTGATACGCGAAAAATCATAATCG | 58.648 | 36.000 | 15.93 | 0.00 | 38.28 | 3.34 |
450 | 451 | 8.461398 | GTTTGTGATACGCGAAAAATCATAATC | 58.539 | 33.333 | 15.93 | 14.31 | 32.88 | 1.75 |
451 | 452 | 7.965655 | TGTTTGTGATACGCGAAAAATCATAAT | 59.034 | 29.630 | 15.93 | 0.00 | 32.88 | 1.28 |
452 | 453 | 7.269511 | GTGTTTGTGATACGCGAAAAATCATAA | 59.730 | 33.333 | 15.93 | 16.41 | 32.60 | 1.90 |
453 | 454 | 6.739100 | GTGTTTGTGATACGCGAAAAATCATA | 59.261 | 34.615 | 15.93 | 11.49 | 32.60 | 2.15 |
454 | 455 | 5.567534 | GTGTTTGTGATACGCGAAAAATCAT | 59.432 | 36.000 | 15.93 | 0.00 | 32.60 | 2.45 |
455 | 456 | 4.907010 | GTGTTTGTGATACGCGAAAAATCA | 59.093 | 37.500 | 15.93 | 13.24 | 0.00 | 2.57 |
456 | 457 | 5.144359 | AGTGTTTGTGATACGCGAAAAATC | 58.856 | 37.500 | 15.93 | 10.66 | 0.00 | 2.17 |
457 | 458 | 5.103290 | AGTGTTTGTGATACGCGAAAAAT | 57.897 | 34.783 | 15.93 | 0.00 | 0.00 | 1.82 |
458 | 459 | 4.539509 | AGTGTTTGTGATACGCGAAAAA | 57.460 | 36.364 | 15.93 | 0.00 | 0.00 | 1.94 |
462 | 463 | 3.564235 | AGTAGTGTTTGTGATACGCGA | 57.436 | 42.857 | 15.93 | 0.00 | 0.00 | 5.87 |
471 | 472 | 5.251601 | GCTAGCTAGCTAGTAGTGTTTGT | 57.748 | 43.478 | 39.05 | 10.93 | 45.67 | 2.83 |
514 | 515 | 9.806203 | TCGAATTTTCTTATCCACGAGTAATAA | 57.194 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
547 | 548 | 0.390492 | TGGCAGCTACCTCATCATCG | 59.610 | 55.000 | 4.19 | 0.00 | 0.00 | 3.84 |
548 | 549 | 1.542108 | GGTGGCAGCTACCTCATCATC | 60.542 | 57.143 | 20.51 | 0.00 | 35.30 | 2.92 |
549 | 550 | 0.471617 | GGTGGCAGCTACCTCATCAT | 59.528 | 55.000 | 20.51 | 0.00 | 35.30 | 2.45 |
579 | 582 | 1.789464 | CCGTGAGCGAGATCTTAATGC | 59.211 | 52.381 | 0.00 | 0.00 | 41.33 | 3.56 |
951 | 962 | 3.284617 | AGAAACCAACCGCAAACTAACT | 58.715 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
984 | 995 | 2.605030 | GCCATCGATCTAGCTAAGCTG | 58.395 | 52.381 | 0.00 | 0.00 | 40.10 | 4.24 |
1452 | 1471 | 0.555769 | TGTTGGACTTGCCCCTCTTT | 59.444 | 50.000 | 0.00 | 0.00 | 34.97 | 2.52 |
1504 | 1523 | 1.203441 | ATGCAGCTGGAACTCCTGGA | 61.203 | 55.000 | 13.45 | 0.00 | 35.73 | 3.86 |
1587 | 1606 | 1.283793 | CACACAGCCAGGCGAAAAG | 59.716 | 57.895 | 5.55 | 0.00 | 0.00 | 2.27 |
1602 | 1621 | 3.594775 | CTTGCGTTGGCCTGCACA | 61.595 | 61.111 | 15.87 | 1.46 | 41.57 | 4.57 |
1603 | 1622 | 3.259425 | CTCTTGCGTTGGCCTGCAC | 62.259 | 63.158 | 15.87 | 4.05 | 41.57 | 4.57 |
1604 | 1623 | 2.979676 | CTCTTGCGTTGGCCTGCA | 60.980 | 61.111 | 12.86 | 12.86 | 39.81 | 4.41 |
1751 | 1863 | 6.585695 | TCGTCCTGAACTAGTACTGATTTT | 57.414 | 37.500 | 5.39 | 0.00 | 0.00 | 1.82 |
1752 | 1864 | 6.585695 | TTCGTCCTGAACTAGTACTGATTT | 57.414 | 37.500 | 5.39 | 0.00 | 0.00 | 2.17 |
1766 | 1878 | 3.724374 | AGACAATTTTCGTTCGTCCTGA | 58.276 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
1767 | 1879 | 4.432503 | CGTAGACAATTTTCGTTCGTCCTG | 60.433 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
1771 | 1883 | 3.798337 | ACACGTAGACAATTTTCGTTCGT | 59.202 | 39.130 | 0.00 | 6.15 | 32.47 | 3.85 |
1776 | 2080 | 4.031426 | GGCTCTACACGTAGACAATTTTCG | 59.969 | 45.833 | 2.74 | 0.00 | 37.28 | 3.46 |
1781 | 2085 | 4.674623 | CGAAAGGCTCTACACGTAGACAAT | 60.675 | 45.833 | 2.74 | 0.00 | 37.28 | 2.71 |
1820 | 2125 | 2.673368 | AGCCGAGCATAGAAACGAAAAG | 59.327 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
1825 | 2130 | 0.652592 | CCAAGCCGAGCATAGAAACG | 59.347 | 55.000 | 0.00 | 0.00 | 0.00 | 3.60 |
1832 | 2137 | 0.108138 | GTAGACACCAAGCCGAGCAT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
1833 | 2138 | 1.185618 | AGTAGACACCAAGCCGAGCA | 61.186 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1852 | 2157 | 8.799367 | GGGTGGTATATATATACATGCATCGTA | 58.201 | 37.037 | 26.66 | 3.79 | 40.16 | 3.43 |
1854 | 2159 | 7.814587 | CAGGGTGGTATATATATACATGCATCG | 59.185 | 40.741 | 26.66 | 11.05 | 40.16 | 3.84 |
1856 | 2161 | 8.567198 | ACAGGGTGGTATATATATACATGCAT | 57.433 | 34.615 | 26.66 | 12.02 | 40.16 | 3.96 |
1857 | 2162 | 7.844269 | AGACAGGGTGGTATATATATACATGCA | 59.156 | 37.037 | 26.66 | 16.51 | 40.16 | 3.96 |
1858 | 2163 | 8.251383 | AGACAGGGTGGTATATATATACATGC | 57.749 | 38.462 | 26.66 | 17.75 | 40.16 | 4.06 |
1861 | 2166 | 9.610104 | ACAAAGACAGGGTGGTATATATATACA | 57.390 | 33.333 | 26.66 | 14.60 | 40.16 | 2.29 |
1895 | 2200 | 8.638873 | CCATAATGACTACTCTAACACATGGTA | 58.361 | 37.037 | 0.00 | 0.00 | 0.00 | 3.25 |
1937 | 2242 | 5.190330 | GGGTAGGGGTATAAAACTGACTTGA | 59.810 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2028 | 2333 | 6.879276 | ATCTGATACCATGAAAGCTGAATG | 57.121 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
2109 | 2420 | 4.189188 | GCGCTCGAAGTAGCCGGA | 62.189 | 66.667 | 5.05 | 0.00 | 39.43 | 5.14 |
2306 | 2617 | 4.892345 | AGATCGAAGAGATGTCTCCAATGA | 59.108 | 41.667 | 6.41 | 1.35 | 43.63 | 2.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.