Multiple sequence alignment - TraesCS3D01G141700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G141700 chr3D 100.000 4351 0 0 1 4351 103786754 103791104 0.000000e+00 8035.0
1 TraesCS3D01G141700 chr3D 85.315 143 18 2 987 1129 602653322 602653461 1.260000e-30 145.0
2 TraesCS3D01G141700 chr3D 75.316 316 67 11 1685 1992 602428165 602428477 1.630000e-29 141.0
3 TraesCS3D01G141700 chr3D 75.157 318 66 12 1685 1992 602751983 602751669 2.110000e-28 137.0
4 TraesCS3D01G141700 chr3D 81.333 150 21 5 3693 3840 602376361 602376217 9.890000e-22 115.0
5 TraesCS3D01G141700 chr3D 98.148 54 1 0 3859 3912 103790583 103790636 1.290000e-15 95.3
6 TraesCS3D01G141700 chr3D 98.148 54 1 0 3830 3883 103790612 103790665 1.290000e-15 95.3
7 TraesCS3D01G141700 chr3D 84.000 75 12 0 1531 1605 603634693 603634619 6.040000e-09 73.1
8 TraesCS3D01G141700 chr3D 84.375 64 9 1 2 65 397141414 397141476 1.310000e-05 62.1
9 TraesCS3D01G141700 chr3B 93.926 2947 108 28 989 3883 154437661 154440588 0.000000e+00 4385.0
10 TraesCS3D01G141700 chr3B 91.685 445 32 4 3859 4300 154440535 154440977 2.880000e-171 612.0
11 TraesCS3D01G141700 chr3B 84.932 146 19 2 984 1129 809625763 809625905 1.260000e-30 145.0
12 TraesCS3D01G141700 chr3B 75.357 280 54 14 1622 1892 810251181 810251454 2.130000e-23 121.0
13 TraesCS3D01G141700 chr3B 81.457 151 19 7 3693 3840 809649969 809649825 9.890000e-22 115.0
14 TraesCS3D01G141700 chr3B 80.690 145 21 5 3693 3835 809835136 809835275 5.950000e-19 106.0
15 TraesCS3D01G141700 chrUn 85.296 2972 305 52 980 3883 96548420 96551327 0.000000e+00 2946.0
16 TraesCS3D01G141700 chrUn 75.157 318 66 12 1685 1992 276043893 276043579 2.110000e-28 137.0
17 TraesCS3D01G141700 chrUn 96.296 81 3 0 3859 3939 96551274 96551354 2.730000e-27 134.0
18 TraesCS3D01G141700 chrUn 85.455 110 5 8 3934 4034 96555081 96555188 2.140000e-18 104.0
19 TraesCS3D01G141700 chr3A 93.001 1386 61 11 1440 2815 552543603 552542244 0.000000e+00 1989.0
20 TraesCS3D01G141700 chr3A 95.264 1098 36 5 2802 3883 552539231 552538134 0.000000e+00 1725.0
21 TraesCS3D01G141700 chr3A 90.545 275 26 0 4040 4314 552538044 552537770 8.890000e-97 364.0
22 TraesCS3D01G141700 chr3A 86.538 312 41 1 1128 1439 552555438 552555128 4.170000e-90 342.0
23 TraesCS3D01G141700 chr3A 91.124 169 10 4 3859 4025 552538189 552538024 1.570000e-54 224.0
24 TraesCS3D01G141700 chr3A 83.810 210 27 4 666 869 429658491 429658699 4.440000e-45 193.0
25 TraesCS3D01G141700 chr3A 87.417 151 13 4 950 1100 552555578 552555434 7.480000e-38 169.0
26 TraesCS3D01G141700 chr3A 79.167 96 20 0 1510 1605 732419304 732419399 2.810000e-07 67.6
27 TraesCS3D01G141700 chr1A 86.635 1691 187 17 2216 3883 10971498 10969824 0.000000e+00 1834.0
28 TraesCS3D01G141700 chr1A 81.766 1042 117 41 1182 2169 10972519 10971497 0.000000e+00 804.0
29 TraesCS3D01G141700 chr1A 87.629 194 12 4 983 1170 10972768 10972581 9.480000e-52 215.0
30 TraesCS3D01G141700 chr1B 86.070 1608 171 21 2298 3883 13968491 13970067 0.000000e+00 1679.0
31 TraesCS3D01G141700 chr1B 79.519 1372 146 60 1000 2303 13964682 13965986 0.000000e+00 852.0
32 TraesCS3D01G141700 chr1D 85.755 1390 141 27 2526 3883 9645659 9644295 0.000000e+00 1417.0
33 TraesCS3D01G141700 chr1D 89.804 255 17 5 1694 1939 9645959 9645705 7.020000e-83 318.0
34 TraesCS3D01G141700 chr1D 80.717 446 52 15 1192 1605 9646708 9646265 2.530000e-82 316.0
35 TraesCS3D01G141700 chr1D 86.441 236 29 3 2938 3171 9642466 9642232 5.580000e-64 255.0
36 TraesCS3D01G141700 chr1D 87.302 126 12 1 3859 3984 9644348 9644227 1.630000e-29 141.0
37 TraesCS3D01G141700 chr6A 82.449 245 28 12 662 894 16456305 16456064 2.650000e-47 200.0
38 TraesCS3D01G141700 chr4B 82.743 226 33 4 665 885 163833558 163833334 3.430000e-46 196.0
39 TraesCS3D01G141700 chr4B 81.735 219 21 11 662 870 290819171 290819380 9.680000e-37 165.0
40 TraesCS3D01G141700 chr4B 81.429 210 32 4 666 869 481244759 481244551 9.680000e-37 165.0
41 TraesCS3D01G141700 chr7A 80.952 210 33 5 666 869 80919388 80919596 4.500000e-35 159.0
42 TraesCS3D01G141700 chr7A 79.724 217 34 7 678 886 565365589 565365375 9.750000e-32 148.0
43 TraesCS3D01G141700 chr7A 97.297 37 1 0 4315 4351 20763872 20763836 3.630000e-06 63.9
44 TraesCS3D01G141700 chr5D 81.000 200 32 3 701 894 430961839 430961640 2.100000e-33 154.0
45 TraesCS3D01G141700 chr2D 82.682 179 23 5 698 869 601512391 601512214 7.540000e-33 152.0
46 TraesCS3D01G141700 chr7B 96.875 32 1 0 4315 4346 123381070 123381039 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G141700 chr3D 103786754 103791104 4350 False 2741.866667 8035 98.765333 1 4351 3 chr3D.!!$F4 4350
1 TraesCS3D01G141700 chr3B 154437661 154440977 3316 False 2498.500000 4385 92.805500 989 4300 2 chr3B.!!$F4 3311
2 TraesCS3D01G141700 chrUn 96548420 96555188 6768 False 1061.333333 2946 89.015667 980 4034 3 chrUn.!!$F1 3054
3 TraesCS3D01G141700 chr3A 552537770 552543603 5833 True 1075.500000 1989 92.483500 1440 4314 4 chr3A.!!$R1 2874
4 TraesCS3D01G141700 chr1A 10969824 10972768 2944 True 951.000000 1834 85.343333 983 3883 3 chr1A.!!$R1 2900
5 TraesCS3D01G141700 chr1B 13964682 13970067 5385 False 1265.500000 1679 82.794500 1000 3883 2 chr1B.!!$F1 2883
6 TraesCS3D01G141700 chr1D 9642232 9646708 4476 True 489.400000 1417 86.003800 1192 3984 5 chr1D.!!$R1 2792

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
985 986 0.029300 CCACAACAACTTCACGCCTG 59.971 55.0 0.0 0.0 0.00 4.85 F
1060 1064 0.247736 TCTTCAAGAAGGAGGAGCGC 59.752 55.0 0.0 0.0 38.88 5.92 F
1502 1617 0.991146 TGTGAATTGCTAGGGGCTGA 59.009 50.0 0.0 0.0 42.39 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2037 2393 6.224584 AGAGGTTACTCACTTAAAAGTCTGC 58.775 40.000 0.0 0.0 46.44 4.26 R
2415 5295 7.173218 TGCAGTTCAAGAAGACCTAAATAACAG 59.827 37.037 0.0 0.0 0.00 3.16 R
3351 9303 0.744874 GCCGTACTCCAGCTCATACA 59.255 55.000 0.0 0.0 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.973835 ACTTCAATTCGTGAACTTTTGTTAAA 57.026 26.923 0.00 0.00 43.66 1.52
26 27 9.581099 ACTTCAATTCGTGAACTTTTGTTAAAT 57.419 25.926 0.00 0.00 43.66 1.40
34 35 9.440784 TCGTGAACTTTTGTTAAATATGTGAAC 57.559 29.630 0.00 0.00 43.66 3.18
35 36 9.445786 CGTGAACTTTTGTTAAATATGTGAACT 57.554 29.630 0.00 0.00 43.66 3.01
86 87 9.408648 TGGAACTCAAGAAGATTTCTAAAAAGT 57.591 29.630 0.00 0.00 39.61 2.66
119 120 9.733219 ATTTTTGAAATTGCAAATCATTTTCGT 57.267 22.222 12.46 2.66 43.06 3.85
120 121 9.565213 TTTTTGAAATTGCAAATCATTTTCGTT 57.435 22.222 12.46 0.00 43.06 3.85
121 122 9.565213 TTTTGAAATTGCAAATCATTTTCGTTT 57.435 22.222 12.46 3.57 43.06 3.60
122 123 8.765044 TTGAAATTGCAAATCATTTTCGTTTC 57.235 26.923 16.26 11.76 43.06 2.78
123 124 7.913423 TGAAATTGCAAATCATTTTCGTTTCA 58.087 26.923 1.71 8.25 43.06 2.69
124 125 8.557864 TGAAATTGCAAATCATTTTCGTTTCAT 58.442 25.926 1.71 0.00 43.06 2.57
125 126 8.716619 AAATTGCAAATCATTTTCGTTTCATG 57.283 26.923 1.71 0.00 0.00 3.07
126 127 7.655236 ATTGCAAATCATTTTCGTTTCATGA 57.345 28.000 1.71 0.00 0.00 3.07
127 128 7.474398 TTGCAAATCATTTTCGTTTCATGAA 57.526 28.000 3.38 3.38 30.79 2.57
128 129 7.655236 TGCAAATCATTTTCGTTTCATGAAT 57.345 28.000 9.40 0.00 30.79 2.57
129 130 7.511463 TGCAAATCATTTTCGTTTCATGAATG 58.489 30.769 9.40 5.44 30.79 2.67
130 131 7.171167 TGCAAATCATTTTCGTTTCATGAATGT 59.829 29.630 9.40 0.00 30.79 2.71
131 132 8.011106 GCAAATCATTTTCGTTTCATGAATGTT 58.989 29.630 9.40 0.00 30.79 2.71
132 133 9.866936 CAAATCATTTTCGTTTCATGAATGTTT 57.133 25.926 9.40 1.68 30.79 2.83
175 176 7.872113 TTTTTAGTGGGTTGAATTTGCAAAT 57.128 28.000 18.99 18.99 0.00 2.32
176 177 8.964476 TTTTTAGTGGGTTGAATTTGCAAATA 57.036 26.923 24.35 7.82 0.00 1.40
177 178 9.566432 TTTTTAGTGGGTTGAATTTGCAAATAT 57.434 25.926 24.35 14.46 0.00 1.28
178 179 9.566432 TTTTAGTGGGTTGAATTTGCAAATATT 57.434 25.926 24.35 11.35 0.00 1.28
179 180 9.566432 TTTAGTGGGTTGAATTTGCAAATATTT 57.434 25.926 24.35 10.59 0.00 1.40
180 181 9.566432 TTAGTGGGTTGAATTTGCAAATATTTT 57.434 25.926 24.35 10.21 0.00 1.82
181 182 8.462589 AGTGGGTTGAATTTGCAAATATTTTT 57.537 26.923 24.35 9.82 0.00 1.94
182 183 8.351461 AGTGGGTTGAATTTGCAAATATTTTTG 58.649 29.630 24.35 4.44 44.18 2.44
183 184 8.348507 GTGGGTTGAATTTGCAAATATTTTTGA 58.651 29.630 24.35 1.23 44.11 2.69
184 185 8.906867 TGGGTTGAATTTGCAAATATTTTTGAA 58.093 25.926 24.35 7.60 44.11 2.69
185 186 9.179552 GGGTTGAATTTGCAAATATTTTTGAAC 57.820 29.630 24.35 17.81 44.11 3.18
186 187 9.949174 GGTTGAATTTGCAAATATTTTTGAACT 57.051 25.926 24.35 5.27 44.11 3.01
193 194 9.766277 TTTGCAAATATTTTTGAACTTGTGAAC 57.234 25.926 8.05 0.00 44.11 3.18
194 195 8.715191 TGCAAATATTTTTGAACTTGTGAACT 57.285 26.923 12.18 0.00 44.11 3.01
195 196 9.809096 TGCAAATATTTTTGAACTTGTGAACTA 57.191 25.926 12.18 0.00 44.11 2.24
207 208 9.698309 TGAACTTGTGAACTATTTTCAAAAACA 57.302 25.926 0.00 0.00 0.00 2.83
208 209 9.952341 GAACTTGTGAACTATTTTCAAAAACAC 57.048 29.630 0.00 0.00 0.00 3.32
209 210 9.482627 AACTTGTGAACTATTTTCAAAAACACA 57.517 25.926 0.00 0.00 31.98 3.72
210 211 9.482627 ACTTGTGAACTATTTTCAAAAACACAA 57.517 25.926 14.95 14.95 37.45 3.33
213 214 9.482627 TGTGAACTATTTTCAAAAACACAAACT 57.517 25.926 0.00 0.00 31.36 2.66
243 244 9.932699 TTGAATTCACAAGCATGTTTTAAATTG 57.067 25.926 7.89 0.00 37.82 2.32
244 245 9.322773 TGAATTCACAAGCATGTTTTAAATTGA 57.677 25.926 3.38 2.02 37.82 2.57
342 343 7.819529 ATTTTTGAATTCGCGAACATTTTTG 57.180 28.000 26.00 0.00 0.00 2.44
343 344 4.963237 TTGAATTCGCGAACATTTTTGG 57.037 36.364 26.00 0.00 0.00 3.28
344 345 4.230314 TGAATTCGCGAACATTTTTGGA 57.770 36.364 26.00 0.00 0.00 3.53
345 346 4.611943 TGAATTCGCGAACATTTTTGGAA 58.388 34.783 26.00 0.00 0.00 3.53
346 347 5.226396 TGAATTCGCGAACATTTTTGGAAT 58.774 33.333 26.00 0.00 0.00 3.01
347 348 5.694006 TGAATTCGCGAACATTTTTGGAATT 59.306 32.000 26.00 9.74 33.30 2.17
348 349 6.201806 TGAATTCGCGAACATTTTTGGAATTT 59.798 30.769 26.00 9.52 32.11 1.82
349 350 4.963237 TCGCGAACATTTTTGGAATTTG 57.037 36.364 6.20 0.00 0.00 2.32
350 351 4.363999 TCGCGAACATTTTTGGAATTTGT 58.636 34.783 6.20 0.00 0.00 2.83
351 352 4.208047 TCGCGAACATTTTTGGAATTTGTG 59.792 37.500 6.20 0.00 0.00 3.33
352 353 4.208047 CGCGAACATTTTTGGAATTTGTGA 59.792 37.500 0.00 0.00 0.00 3.58
353 354 5.276584 CGCGAACATTTTTGGAATTTGTGAA 60.277 36.000 0.00 0.00 0.00 3.18
354 355 6.563753 CGCGAACATTTTTGGAATTTGTGAAT 60.564 34.615 0.00 0.00 0.00 2.57
355 356 7.131565 GCGAACATTTTTGGAATTTGTGAATT 58.868 30.769 0.00 0.00 38.16 2.17
356 357 7.643371 GCGAACATTTTTGGAATTTGTGAATTT 59.357 29.630 0.00 0.00 35.65 1.82
405 406 9.896263 GTGGAACAATTTTTCAATTTGCATATT 57.104 25.926 6.67 0.00 44.16 1.28
423 424 8.932945 TGCATATTTTTGTGAAACTACAAACA 57.067 26.923 3.78 0.00 46.73 2.83
424 425 9.539825 TGCATATTTTTGTGAAACTACAAACAT 57.460 25.926 3.78 6.04 46.73 2.71
448 449 6.668541 TTTTTCGAATTTGGCATTTGTGAA 57.331 29.167 0.00 0.00 0.00 3.18
449 450 5.649602 TTTCGAATTTGGCATTTGTGAAC 57.350 34.783 0.00 0.00 0.00 3.18
450 451 4.313277 TCGAATTTGGCATTTGTGAACA 57.687 36.364 0.00 0.00 0.00 3.18
451 452 4.880759 TCGAATTTGGCATTTGTGAACAT 58.119 34.783 0.00 0.00 0.00 2.71
452 453 5.295950 TCGAATTTGGCATTTGTGAACATT 58.704 33.333 0.00 0.00 0.00 2.71
453 454 5.757320 TCGAATTTGGCATTTGTGAACATTT 59.243 32.000 0.00 0.00 0.00 2.32
454 455 6.259608 TCGAATTTGGCATTTGTGAACATTTT 59.740 30.769 0.00 0.00 0.00 1.82
455 456 6.911511 CGAATTTGGCATTTGTGAACATTTTT 59.088 30.769 0.00 0.00 0.00 1.94
493 494 9.830294 AAGCAAGAAAAACAAAAAGAAATGAAG 57.170 25.926 0.00 0.00 0.00 3.02
494 495 9.218440 AGCAAGAAAAACAAAAAGAAATGAAGA 57.782 25.926 0.00 0.00 0.00 2.87
495 496 9.824534 GCAAGAAAAACAAAAAGAAATGAAGAA 57.175 25.926 0.00 0.00 0.00 2.52
499 500 9.249844 GAAAAACAAAAAGAAATGAAGAACACG 57.750 29.630 0.00 0.00 0.00 4.49
500 501 8.527567 AAAACAAAAAGAAATGAAGAACACGA 57.472 26.923 0.00 0.00 0.00 4.35
501 502 8.527567 AAACAAAAAGAAATGAAGAACACGAA 57.472 26.923 0.00 0.00 0.00 3.85
502 503 8.527567 AACAAAAAGAAATGAAGAACACGAAA 57.472 26.923 0.00 0.00 0.00 3.46
503 504 8.173321 ACAAAAAGAAATGAAGAACACGAAAG 57.827 30.769 0.00 0.00 0.00 2.62
516 517 1.223187 ACGAAAGTAAACACAGGGCG 58.777 50.000 0.00 0.00 46.88 6.13
517 518 0.110373 CGAAAGTAAACACAGGGCGC 60.110 55.000 0.00 0.00 0.00 6.53
518 519 0.240145 GAAAGTAAACACAGGGCGCC 59.760 55.000 21.18 21.18 0.00 6.53
519 520 1.176619 AAAGTAAACACAGGGCGCCC 61.177 55.000 39.29 39.29 0.00 6.13
520 521 3.060000 GTAAACACAGGGCGCCCC 61.060 66.667 41.72 23.87 45.90 5.80
543 544 4.776322 CGCACTTGGGCCATCCGA 62.776 66.667 7.26 0.00 38.76 4.55
544 545 2.361104 GCACTTGGGCCATCCGAA 60.361 61.111 7.26 0.00 38.76 4.30
545 546 1.976474 GCACTTGGGCCATCCGAAA 60.976 57.895 7.26 0.00 38.76 3.46
546 547 1.531739 GCACTTGGGCCATCCGAAAA 61.532 55.000 7.26 0.00 38.76 2.29
547 548 0.243636 CACTTGGGCCATCCGAAAAC 59.756 55.000 7.26 0.00 38.76 2.43
548 549 0.178975 ACTTGGGCCATCCGAAAACA 60.179 50.000 7.26 0.00 38.76 2.83
549 550 0.243636 CTTGGGCCATCCGAAAACAC 59.756 55.000 7.26 0.00 38.76 3.32
550 551 0.178975 TTGGGCCATCCGAAAACACT 60.179 50.000 7.26 0.00 38.76 3.55
551 552 0.608035 TGGGCCATCCGAAAACACTC 60.608 55.000 0.00 0.00 38.76 3.51
552 553 1.644786 GGGCCATCCGAAAACACTCG 61.645 60.000 4.39 0.00 38.58 4.18
553 554 1.134694 GCCATCCGAAAACACTCGC 59.865 57.895 0.00 0.00 37.51 5.03
554 555 1.573829 GCCATCCGAAAACACTCGCA 61.574 55.000 0.00 0.00 37.51 5.10
555 556 0.165944 CCATCCGAAAACACTCGCAC 59.834 55.000 0.00 0.00 37.51 5.34
556 557 0.865111 CATCCGAAAACACTCGCACA 59.135 50.000 0.00 0.00 37.51 4.57
557 558 1.262950 CATCCGAAAACACTCGCACAA 59.737 47.619 0.00 0.00 37.51 3.33
558 559 1.370609 TCCGAAAACACTCGCACAAA 58.629 45.000 0.00 0.00 37.51 2.83
559 560 1.329292 TCCGAAAACACTCGCACAAAG 59.671 47.619 0.00 0.00 37.51 2.77
560 561 1.596954 CCGAAAACACTCGCACAAAGG 60.597 52.381 0.00 0.00 37.51 3.11
561 562 1.596954 CGAAAACACTCGCACAAAGGG 60.597 52.381 0.00 0.00 31.04 3.95
562 563 0.744281 AAAACACTCGCACAAAGGGG 59.256 50.000 0.00 0.00 0.00 4.79
563 564 1.106944 AAACACTCGCACAAAGGGGG 61.107 55.000 0.00 0.00 36.56 5.40
591 592 3.262936 CGGTGCCGCAATTCTTGA 58.737 55.556 0.00 0.00 0.00 3.02
592 593 1.154225 CGGTGCCGCAATTCTTGAC 60.154 57.895 0.00 0.00 0.00 3.18
593 594 1.577328 CGGTGCCGCAATTCTTGACT 61.577 55.000 0.00 0.00 0.00 3.41
594 595 0.598065 GGTGCCGCAATTCTTGACTT 59.402 50.000 0.00 0.00 0.00 3.01
595 596 1.000274 GGTGCCGCAATTCTTGACTTT 60.000 47.619 0.00 0.00 0.00 2.66
596 597 2.319472 GTGCCGCAATTCTTGACTTTC 58.681 47.619 0.00 0.00 0.00 2.62
597 598 1.269448 TGCCGCAATTCTTGACTTTCC 59.731 47.619 0.00 0.00 0.00 3.13
598 599 1.269448 GCCGCAATTCTTGACTTTCCA 59.731 47.619 0.00 0.00 0.00 3.53
599 600 2.094545 GCCGCAATTCTTGACTTTCCAT 60.095 45.455 0.00 0.00 0.00 3.41
600 601 3.762779 CCGCAATTCTTGACTTTCCATC 58.237 45.455 0.00 0.00 0.00 3.51
601 602 3.419915 CGCAATTCTTGACTTTCCATCG 58.580 45.455 0.00 0.00 0.00 3.84
602 603 3.174375 GCAATTCTTGACTTTCCATCGC 58.826 45.455 0.00 0.00 0.00 4.58
603 604 3.366273 GCAATTCTTGACTTTCCATCGCA 60.366 43.478 0.00 0.00 0.00 5.10
604 605 4.161333 CAATTCTTGACTTTCCATCGCAC 58.839 43.478 0.00 0.00 0.00 5.34
605 606 2.542020 TCTTGACTTTCCATCGCACA 57.458 45.000 0.00 0.00 0.00 4.57
606 607 2.844946 TCTTGACTTTCCATCGCACAA 58.155 42.857 0.00 0.00 0.00 3.33
607 608 2.548057 TCTTGACTTTCCATCGCACAAC 59.452 45.455 0.00 0.00 0.00 3.32
608 609 1.234821 TGACTTTCCATCGCACAACC 58.765 50.000 0.00 0.00 0.00 3.77
609 610 0.521735 GACTTTCCATCGCACAACCC 59.478 55.000 0.00 0.00 0.00 4.11
610 611 1.234615 ACTTTCCATCGCACAACCCG 61.235 55.000 0.00 0.00 0.00 5.28
611 612 0.953471 CTTTCCATCGCACAACCCGA 60.953 55.000 0.00 0.00 39.24 5.14
612 613 0.953471 TTTCCATCGCACAACCCGAG 60.953 55.000 0.00 0.00 38.20 4.63
613 614 2.796483 TTCCATCGCACAACCCGAGG 62.796 60.000 0.00 0.00 38.20 4.63
614 615 2.264480 CATCGCACAACCCGAGGA 59.736 61.111 0.00 0.00 38.62 3.71
615 616 1.375396 CATCGCACAACCCGAGGAA 60.375 57.895 0.00 0.00 38.62 3.36
616 617 0.744414 CATCGCACAACCCGAGGAAT 60.744 55.000 0.00 0.00 38.62 3.01
617 618 0.828022 ATCGCACAACCCGAGGAATA 59.172 50.000 0.00 0.00 38.20 1.75
618 619 0.174845 TCGCACAACCCGAGGAATAG 59.825 55.000 0.00 0.00 0.00 1.73
619 620 0.810031 CGCACAACCCGAGGAATAGG 60.810 60.000 0.00 0.00 0.00 2.57
639 640 1.660167 GGGGGTAGTATTTCGTGCAC 58.340 55.000 6.82 6.82 0.00 4.57
640 641 1.660167 GGGGTAGTATTTCGTGCACC 58.340 55.000 12.15 0.00 0.00 5.01
641 642 1.065998 GGGGTAGTATTTCGTGCACCA 60.066 52.381 12.15 0.00 0.00 4.17
642 643 2.277084 GGGTAGTATTTCGTGCACCAG 58.723 52.381 12.15 0.00 0.00 4.00
643 644 2.354403 GGGTAGTATTTCGTGCACCAGT 60.354 50.000 12.15 0.00 0.00 4.00
644 645 3.119029 GGGTAGTATTTCGTGCACCAGTA 60.119 47.826 12.15 0.00 0.00 2.74
645 646 3.861689 GGTAGTATTTCGTGCACCAGTAC 59.138 47.826 12.15 9.46 0.00 2.73
646 647 2.968675 AGTATTTCGTGCACCAGTACC 58.031 47.619 12.15 0.00 0.00 3.34
647 648 2.300723 AGTATTTCGTGCACCAGTACCA 59.699 45.455 12.15 0.00 0.00 3.25
648 649 1.519408 ATTTCGTGCACCAGTACCAC 58.481 50.000 12.15 0.00 0.00 4.16
649 650 0.533308 TTTCGTGCACCAGTACCACC 60.533 55.000 12.15 0.00 0.00 4.61
650 651 2.702751 TTCGTGCACCAGTACCACCG 62.703 60.000 12.15 0.00 0.00 4.94
651 652 2.358247 GTGCACCAGTACCACCGG 60.358 66.667 5.22 0.00 0.00 5.28
652 653 4.323477 TGCACCAGTACCACCGGC 62.323 66.667 0.00 0.00 0.00 6.13
653 654 4.323477 GCACCAGTACCACCGGCA 62.323 66.667 0.00 0.00 0.00 5.69
654 655 2.358247 CACCAGTACCACCGGCAC 60.358 66.667 0.00 0.00 0.00 5.01
655 656 2.845317 ACCAGTACCACCGGCACA 60.845 61.111 0.00 0.00 0.00 4.57
656 657 2.358247 CCAGTACCACCGGCACAC 60.358 66.667 0.00 0.00 0.00 3.82
657 658 2.736995 CAGTACCACCGGCACACG 60.737 66.667 0.00 0.00 43.80 4.49
658 659 3.228759 AGTACCACCGGCACACGT 61.229 61.111 0.00 0.00 42.24 4.49
659 660 3.039588 GTACCACCGGCACACGTG 61.040 66.667 15.48 15.48 42.24 4.49
682 683 3.816613 GCCGTAGCGCATTTTAAAATG 57.183 42.857 28.85 28.85 46.55 2.32
683 684 3.175929 GCCGTAGCGCATTTTAAAATGT 58.824 40.909 31.43 19.80 45.77 2.71
684 685 3.610677 GCCGTAGCGCATTTTAAAATGTT 59.389 39.130 31.43 22.45 45.77 2.71
685 686 4.090786 GCCGTAGCGCATTTTAAAATGTTT 59.909 37.500 31.43 22.19 45.77 2.83
686 687 5.720164 GCCGTAGCGCATTTTAAAATGTTTC 60.720 40.000 31.43 22.72 45.77 2.78
687 688 5.343593 CCGTAGCGCATTTTAAAATGTTTCA 59.656 36.000 31.43 17.76 45.77 2.69
688 689 6.129062 CCGTAGCGCATTTTAAAATGTTTCAA 60.129 34.615 31.43 16.93 45.77 2.69
689 690 7.277205 CGTAGCGCATTTTAAAATGTTTCAAA 58.723 30.769 31.43 16.13 45.77 2.69
690 691 7.789759 CGTAGCGCATTTTAAAATGTTTCAAAA 59.210 29.630 31.43 14.95 45.77 2.44
691 692 9.427127 GTAGCGCATTTTAAAATGTTTCAAAAA 57.573 25.926 31.43 13.75 45.77 1.94
726 727 9.793252 AAAAATCTAGCACATTGACACAATATC 57.207 29.630 0.00 0.00 0.00 1.63
727 728 8.510243 AAATCTAGCACATTGACACAATATCA 57.490 30.769 0.00 0.00 0.00 2.15
728 729 8.510243 AATCTAGCACATTGACACAATATCAA 57.490 30.769 0.00 0.00 40.25 2.57
729 730 8.687292 ATCTAGCACATTGACACAATATCAAT 57.313 30.769 0.00 0.00 45.57 2.57
740 741 8.558973 TGACACAATATCAATGTATGTTGTCA 57.441 30.769 0.00 0.00 38.62 3.58
741 742 8.450180 TGACACAATATCAATGTATGTTGTCAC 58.550 33.333 0.00 0.00 38.62 3.67
742 743 8.334263 ACACAATATCAATGTATGTTGTCACA 57.666 30.769 0.00 0.00 38.62 3.58
743 744 8.791675 ACACAATATCAATGTATGTTGTCACAA 58.208 29.630 0.00 0.00 38.62 3.33
744 745 9.623350 CACAATATCAATGTATGTTGTCACAAA 57.377 29.630 0.00 0.00 38.62 2.83
750 751 8.404889 TCAATGTATGTTGTCACAAAACTTTG 57.595 30.769 14.95 14.95 43.62 2.77
771 772 9.934190 ACTTTGTATCAAAATTTGAAACATTGC 57.066 25.926 12.75 0.35 43.95 3.56
772 773 9.932699 CTTTGTATCAAAATTTGAAACATTGCA 57.067 25.926 12.75 2.99 43.95 4.08
774 775 9.880064 TTGTATCAAAATTTGAAACATTGCATG 57.120 25.926 12.75 0.00 43.95 4.06
775 776 9.269453 TGTATCAAAATTTGAAACATTGCATGA 57.731 25.926 12.75 0.00 43.95 3.07
776 777 9.749490 GTATCAAAATTTGAAACATTGCATGAG 57.251 29.630 12.75 0.00 43.95 2.90
777 778 8.610248 ATCAAAATTTGAAACATTGCATGAGA 57.390 26.923 12.75 0.00 43.95 3.27
778 779 8.610248 TCAAAATTTGAAACATTGCATGAGAT 57.390 26.923 5.87 0.00 36.59 2.75
779 780 9.708092 TCAAAATTTGAAACATTGCATGAGATA 57.292 25.926 5.87 0.00 36.59 1.98
780 781 9.749490 CAAAATTTGAAACATTGCATGAGATAC 57.251 29.630 0.00 0.00 0.00 2.24
781 782 9.491675 AAAATTTGAAACATTGCATGAGATACA 57.508 25.926 0.00 0.00 0.00 2.29
782 783 9.491675 AAATTTGAAACATTGCATGAGATACAA 57.508 25.926 0.00 0.00 0.00 2.41
783 784 9.491675 AATTTGAAACATTGCATGAGATACAAA 57.508 25.926 0.00 0.00 0.00 2.83
784 785 8.883954 TTTGAAACATTGCATGAGATACAAAA 57.116 26.923 0.00 0.00 0.00 2.44
785 786 9.491675 TTTGAAACATTGCATGAGATACAAAAT 57.508 25.926 0.00 0.00 0.00 1.82
786 787 9.491675 TTGAAACATTGCATGAGATACAAAATT 57.508 25.926 0.00 0.00 0.00 1.82
787 788 8.927721 TGAAACATTGCATGAGATACAAAATTG 58.072 29.630 0.00 0.00 0.00 2.32
788 789 9.142515 GAAACATTGCATGAGATACAAAATTGA 57.857 29.630 0.00 0.00 0.00 2.57
789 790 9.491675 AAACATTGCATGAGATACAAAATTGAA 57.508 25.926 0.00 0.00 0.00 2.69
790 791 9.491675 AACATTGCATGAGATACAAAATTGAAA 57.508 25.926 0.00 0.00 0.00 2.69
791 792 9.491675 ACATTGCATGAGATACAAAATTGAAAA 57.508 25.926 0.00 0.00 0.00 2.29
805 806 9.991388 ACAAAATTGAAAATTTTGACATCAGTG 57.009 25.926 30.44 12.72 46.36 3.66
806 807 9.991388 CAAAATTGAAAATTTTGACATCAGTGT 57.009 25.926 24.07 0.00 46.36 3.55
807 808 9.991388 AAAATTGAAAATTTTGACATCAGTGTG 57.009 25.926 8.47 0.00 39.09 3.82
808 809 8.945481 AATTGAAAATTTTGACATCAGTGTGA 57.055 26.923 8.47 0.00 39.09 3.58
809 810 9.550406 AATTGAAAATTTTGACATCAGTGTGAT 57.450 25.926 8.47 0.00 39.09 3.06
814 815 9.985730 AAAATTTTGACATCAGTGTGATAATGT 57.014 25.926 1.75 0.00 39.09 2.71
815 816 8.975410 AATTTTGACATCAGTGTGATAATGTG 57.025 30.769 0.00 0.00 39.09 3.21
816 817 5.550232 TTGACATCAGTGTGATAATGTGC 57.450 39.130 0.00 0.00 39.09 4.57
817 818 3.940852 TGACATCAGTGTGATAATGTGCC 59.059 43.478 0.00 0.00 39.09 5.01
818 819 3.940852 GACATCAGTGTGATAATGTGCCA 59.059 43.478 0.00 0.00 39.09 4.92
819 820 4.334552 ACATCAGTGTGATAATGTGCCAA 58.665 39.130 0.00 0.00 34.28 4.52
820 821 4.766373 ACATCAGTGTGATAATGTGCCAAA 59.234 37.500 0.00 0.00 34.28 3.28
821 822 5.243507 ACATCAGTGTGATAATGTGCCAAAA 59.756 36.000 0.00 0.00 34.28 2.44
822 823 5.781210 TCAGTGTGATAATGTGCCAAAAA 57.219 34.783 0.00 0.00 0.00 1.94
823 824 5.527951 TCAGTGTGATAATGTGCCAAAAAC 58.472 37.500 0.00 0.00 0.00 2.43
824 825 4.685628 CAGTGTGATAATGTGCCAAAAACC 59.314 41.667 0.00 0.00 0.00 3.27
825 826 3.993736 GTGTGATAATGTGCCAAAAACCC 59.006 43.478 0.00 0.00 0.00 4.11
826 827 3.643320 TGTGATAATGTGCCAAAAACCCA 59.357 39.130 0.00 0.00 0.00 4.51
827 828 3.993736 GTGATAATGTGCCAAAAACCCAC 59.006 43.478 0.00 0.00 0.00 4.61
828 829 3.007398 TGATAATGTGCCAAAAACCCACC 59.993 43.478 0.00 0.00 0.00 4.61
829 830 1.506025 AATGTGCCAAAAACCCACCT 58.494 45.000 0.00 0.00 0.00 4.00
830 831 1.506025 ATGTGCCAAAAACCCACCTT 58.494 45.000 0.00 0.00 0.00 3.50
831 832 2.160721 TGTGCCAAAAACCCACCTTA 57.839 45.000 0.00 0.00 0.00 2.69
832 833 2.683768 TGTGCCAAAAACCCACCTTAT 58.316 42.857 0.00 0.00 0.00 1.73
833 834 2.366916 TGTGCCAAAAACCCACCTTATG 59.633 45.455 0.00 0.00 0.00 1.90
834 835 2.367241 GTGCCAAAAACCCACCTTATGT 59.633 45.455 0.00 0.00 0.00 2.29
835 836 3.041946 TGCCAAAAACCCACCTTATGTT 58.958 40.909 0.00 0.00 0.00 2.71
836 837 3.456277 TGCCAAAAACCCACCTTATGTTT 59.544 39.130 0.00 0.00 33.86 2.83
837 838 3.812609 GCCAAAAACCCACCTTATGTTTG 59.187 43.478 0.00 0.00 32.85 2.93
838 839 4.684757 GCCAAAAACCCACCTTATGTTTGT 60.685 41.667 0.00 0.00 32.85 2.83
839 840 5.453480 GCCAAAAACCCACCTTATGTTTGTA 60.453 40.000 0.00 0.00 32.85 2.41
840 841 5.986741 CCAAAAACCCACCTTATGTTTGTAC 59.013 40.000 0.00 0.00 32.85 2.90
841 842 6.183360 CCAAAAACCCACCTTATGTTTGTACT 60.183 38.462 0.00 0.00 32.85 2.73
842 843 7.014422 CCAAAAACCCACCTTATGTTTGTACTA 59.986 37.037 0.00 0.00 32.85 1.82
843 844 8.581578 CAAAAACCCACCTTATGTTTGTACTAT 58.418 33.333 0.00 0.00 32.85 2.12
844 845 8.715190 AAAACCCACCTTATGTTTGTACTATT 57.285 30.769 0.00 0.00 32.85 1.73
845 846 7.933215 AACCCACCTTATGTTTGTACTATTC 57.067 36.000 0.00 0.00 0.00 1.75
846 847 7.023171 ACCCACCTTATGTTTGTACTATTCA 57.977 36.000 0.00 0.00 0.00 2.57
847 848 7.639378 ACCCACCTTATGTTTGTACTATTCAT 58.361 34.615 0.00 0.00 0.00 2.57
848 849 8.113462 ACCCACCTTATGTTTGTACTATTCATT 58.887 33.333 0.00 0.00 0.00 2.57
849 850 8.405531 CCCACCTTATGTTTGTACTATTCATTG 58.594 37.037 0.00 0.00 0.00 2.82
850 851 8.956426 CCACCTTATGTTTGTACTATTCATTGT 58.044 33.333 0.00 0.00 0.00 2.71
887 888 5.579384 TTGTAAGTCGTACAATGTTTCGG 57.421 39.130 7.20 0.00 45.76 4.30
888 889 4.869215 TGTAAGTCGTACAATGTTTCGGA 58.131 39.130 9.75 0.00 39.85 4.55
889 890 5.472148 TGTAAGTCGTACAATGTTTCGGAT 58.528 37.500 9.75 2.03 39.85 4.18
890 891 5.927689 TGTAAGTCGTACAATGTTTCGGATT 59.072 36.000 9.75 7.94 39.85 3.01
891 892 5.934935 AAGTCGTACAATGTTTCGGATTT 57.065 34.783 9.75 2.21 0.00 2.17
892 893 5.934935 AGTCGTACAATGTTTCGGATTTT 57.065 34.783 9.75 0.00 0.00 1.82
893 894 5.685841 AGTCGTACAATGTTTCGGATTTTG 58.314 37.500 9.75 0.00 0.00 2.44
894 895 4.319901 GTCGTACAATGTTTCGGATTTTGC 59.680 41.667 9.75 0.00 0.00 3.68
895 896 3.296943 CGTACAATGTTTCGGATTTTGCG 59.703 43.478 0.00 0.00 0.00 4.85
896 897 3.634568 ACAATGTTTCGGATTTTGCGA 57.365 38.095 0.00 0.00 38.78 5.10
897 898 3.305110 ACAATGTTTCGGATTTTGCGAC 58.695 40.909 0.00 0.00 40.66 5.19
898 899 3.243234 ACAATGTTTCGGATTTTGCGACA 60.243 39.130 0.00 0.00 40.66 4.35
899 900 2.679355 TGTTTCGGATTTTGCGACAG 57.321 45.000 0.00 0.00 40.66 3.51
900 901 1.327507 GTTTCGGATTTTGCGACAGC 58.672 50.000 0.00 0.00 40.66 4.40
911 912 2.510948 GCGACAGCATAGACCGATG 58.489 57.895 0.00 0.00 44.35 3.84
912 913 0.249073 GCGACAGCATAGACCGATGT 60.249 55.000 0.00 0.00 44.35 3.06
913 914 1.802880 GCGACAGCATAGACCGATGTT 60.803 52.381 0.00 0.00 44.35 2.71
914 915 1.854743 CGACAGCATAGACCGATGTTG 59.145 52.381 5.67 5.67 42.07 3.33
916 917 2.621338 ACAGCATAGACCGATGTTGTG 58.379 47.619 10.60 1.63 45.91 3.33
917 918 2.028112 ACAGCATAGACCGATGTTGTGT 60.028 45.455 10.60 2.12 45.91 3.72
918 919 2.349580 CAGCATAGACCGATGTTGTGTG 59.650 50.000 0.00 0.00 34.40 3.82
919 920 2.233676 AGCATAGACCGATGTTGTGTGA 59.766 45.455 0.00 0.00 0.00 3.58
920 921 3.000041 GCATAGACCGATGTTGTGTGAA 59.000 45.455 0.00 0.00 0.00 3.18
921 922 3.623060 GCATAGACCGATGTTGTGTGAAT 59.377 43.478 0.00 0.00 0.00 2.57
922 923 4.494690 GCATAGACCGATGTTGTGTGAATG 60.495 45.833 0.00 0.00 0.00 2.67
923 924 1.806542 AGACCGATGTTGTGTGAATGC 59.193 47.619 0.00 0.00 0.00 3.56
924 925 1.535028 GACCGATGTTGTGTGAATGCA 59.465 47.619 0.00 0.00 0.00 3.96
925 926 1.266718 ACCGATGTTGTGTGAATGCAC 59.733 47.619 0.00 0.00 45.35 4.57
926 927 1.401409 CCGATGTTGTGTGAATGCACC 60.401 52.381 0.00 0.00 44.51 5.01
927 928 1.266446 CGATGTTGTGTGAATGCACCA 59.734 47.619 0.00 0.00 44.51 4.17
928 929 2.666344 CGATGTTGTGTGAATGCACCAG 60.666 50.000 0.00 0.00 44.51 4.00
929 930 2.049888 TGTTGTGTGAATGCACCAGA 57.950 45.000 0.00 0.00 44.51 3.86
930 931 2.585330 TGTTGTGTGAATGCACCAGAT 58.415 42.857 0.00 0.00 44.51 2.90
931 932 2.293955 TGTTGTGTGAATGCACCAGATG 59.706 45.455 0.00 0.00 44.51 2.90
941 942 2.387309 CACCAGATGCATCACGTCC 58.613 57.895 27.81 0.69 34.56 4.79
942 943 1.091771 CACCAGATGCATCACGTCCC 61.092 60.000 27.81 0.00 34.56 4.46
943 944 1.267574 ACCAGATGCATCACGTCCCT 61.268 55.000 27.81 2.86 34.56 4.20
944 945 0.531532 CCAGATGCATCACGTCCCTC 60.532 60.000 27.81 0.00 34.56 4.30
945 946 0.531532 CAGATGCATCACGTCCCTCC 60.532 60.000 27.81 0.00 34.56 4.30
946 947 1.227674 GATGCATCACGTCCCTCCC 60.228 63.158 21.92 0.00 0.00 4.30
947 948 2.666596 GATGCATCACGTCCCTCCCC 62.667 65.000 21.92 0.00 0.00 4.81
948 949 3.083997 GCATCACGTCCCTCCCCT 61.084 66.667 0.00 0.00 0.00 4.79
949 950 1.760875 GCATCACGTCCCTCCCCTA 60.761 63.158 0.00 0.00 0.00 3.53
950 951 1.335132 GCATCACGTCCCTCCCCTAA 61.335 60.000 0.00 0.00 0.00 2.69
951 952 1.200519 CATCACGTCCCTCCCCTAAA 58.799 55.000 0.00 0.00 0.00 1.85
952 953 1.557832 CATCACGTCCCTCCCCTAAAA 59.442 52.381 0.00 0.00 0.00 1.52
953 954 1.732117 TCACGTCCCTCCCCTAAAAA 58.268 50.000 0.00 0.00 0.00 1.94
973 974 3.443145 AAAATATCCCCGACCACAACA 57.557 42.857 0.00 0.00 0.00 3.33
974 975 3.443145 AAATATCCCCGACCACAACAA 57.557 42.857 0.00 0.00 0.00 2.83
975 976 2.413310 ATATCCCCGACCACAACAAC 57.587 50.000 0.00 0.00 0.00 3.32
976 977 1.354101 TATCCCCGACCACAACAACT 58.646 50.000 0.00 0.00 0.00 3.16
977 978 0.476771 ATCCCCGACCACAACAACTT 59.523 50.000 0.00 0.00 0.00 2.66
978 979 0.179040 TCCCCGACCACAACAACTTC 60.179 55.000 0.00 0.00 0.00 3.01
981 982 0.303493 CCGACCACAACAACTTCACG 59.697 55.000 0.00 0.00 0.00 4.35
985 986 0.029300 CCACAACAACTTCACGCCTG 59.971 55.000 0.00 0.00 0.00 4.85
1055 1059 1.209261 GAGGCCTCTTCAAGAAGGAGG 59.791 57.143 26.25 16.99 38.88 4.30
1056 1060 1.203364 AGGCCTCTTCAAGAAGGAGGA 60.203 52.381 21.80 2.37 37.65 3.71
1057 1061 1.209261 GGCCTCTTCAAGAAGGAGGAG 59.791 57.143 21.80 9.71 39.84 3.69
1058 1062 1.406751 GCCTCTTCAAGAAGGAGGAGC 60.407 57.143 21.80 11.05 39.08 4.70
1059 1063 1.134848 CCTCTTCAAGAAGGAGGAGCG 60.135 57.143 16.62 0.00 39.08 5.03
1060 1064 0.247736 TCTTCAAGAAGGAGGAGCGC 59.752 55.000 0.00 0.00 38.88 5.92
1093 1097 2.537560 GGTGAAGATGGCGCATCGG 61.538 63.158 10.83 0.00 44.67 4.18
1124 1134 2.483013 CCCTTGTCGATTCGGATAGCAA 60.483 50.000 6.18 4.08 0.00 3.91
1190 1251 4.319177 GAGCTTGTTATGTCCTCAACAGT 58.681 43.478 0.00 0.00 42.37 3.55
1328 1401 5.975282 AGTCCTTACTCGTAAATCTTTCCC 58.025 41.667 0.00 0.00 0.00 3.97
1375 1448 4.164030 TGCTAGAATACCAATGCCAGAAGA 59.836 41.667 0.00 0.00 0.00 2.87
1412 1500 4.141287 CAGGGACGAGATAGAGATTCTGT 58.859 47.826 0.00 0.00 0.00 3.41
1489 1604 4.040829 TGGAACACATGAGAGACTGTGAAT 59.959 41.667 9.46 0.00 44.35 2.57
1502 1617 0.991146 TGTGAATTGCTAGGGGCTGA 59.009 50.000 0.00 0.00 42.39 4.26
1505 1620 1.354031 TGAATTGCTAGGGGCTGACAA 59.646 47.619 0.00 0.00 42.39 3.18
1512 1627 1.415659 CTAGGGGCTGACAAGGATGAG 59.584 57.143 0.00 0.00 0.00 2.90
1608 1723 2.027100 AGCTTGCCTGGTTAGTTAGTCC 60.027 50.000 0.00 0.00 0.00 3.85
1614 1729 3.710165 GCCTGGTTAGTTAGTCCCATACT 59.290 47.826 0.00 0.00 42.62 2.12
1616 1731 5.364735 GCCTGGTTAGTTAGTCCCATACTAA 59.635 44.000 0.00 0.00 46.25 2.24
1638 1764 9.113838 ACTAATGCTCCTATCTGTTTATTGTTG 57.886 33.333 0.00 0.00 0.00 3.33
1708 2046 3.126001 TCTGTGTAGCTGTTGAAAGGG 57.874 47.619 0.00 0.00 0.00 3.95
1991 2344 5.226194 TGTTGATTTTCCCTTTGAATGGG 57.774 39.130 9.76 9.76 45.90 4.00
2033 2389 8.507249 GCTTAATAAGAATGTGACTTCTTGTGT 58.493 33.333 15.47 7.13 43.52 3.72
2037 2393 5.936686 AGAATGTGACTTCTTGTGTCATG 57.063 39.130 0.00 0.00 44.74 3.07
2038 2394 4.214971 AGAATGTGACTTCTTGTGTCATGC 59.785 41.667 0.00 0.00 44.74 4.06
2039 2395 2.916640 TGTGACTTCTTGTGTCATGCA 58.083 42.857 0.00 0.00 44.74 3.96
2209 2578 5.885912 TCTACAACAAAAGAAAAGCCAGACT 59.114 36.000 0.00 0.00 0.00 3.24
3119 9059 7.335171 TGTGAAAGATCTTGATGGTATCTTGTG 59.665 37.037 9.17 0.00 39.34 3.33
3223 9169 8.760103 TTATGGATGATTGTGTTTTGTGAATG 57.240 30.769 0.00 0.00 0.00 2.67
3351 9303 0.806102 GCACACGACCGCAGTATGAT 60.806 55.000 0.00 0.00 39.69 2.45
3472 9425 9.729023 TCGGTATATCTTTTACAATGCAAATTG 57.271 29.630 0.00 0.00 37.54 2.32
3690 9656 6.961359 TGTTCGGTAGATATTGTCAAACAG 57.039 37.500 0.00 0.00 0.00 3.16
3855 9830 1.529438 GCAGCTGCGTAGTTGTGTTTA 59.471 47.619 25.23 0.00 37.45 2.01
3861 9836 5.929992 AGCTGCGTAGTTGTGTTTATTAAGA 59.070 36.000 1.53 0.00 0.00 2.10
3862 9837 6.594159 AGCTGCGTAGTTGTGTTTATTAAGAT 59.406 34.615 1.53 0.00 0.00 2.40
3863 9838 7.762615 AGCTGCGTAGTTGTGTTTATTAAGATA 59.237 33.333 1.53 0.00 0.00 1.98
3864 9839 8.056571 GCTGCGTAGTTGTGTTTATTAAGATAG 58.943 37.037 1.53 0.00 0.00 2.08
3865 9840 7.902032 TGCGTAGTTGTGTTTATTAAGATAGC 58.098 34.615 0.00 0.00 0.00 2.97
3866 9841 7.546316 TGCGTAGTTGTGTTTATTAAGATAGCA 59.454 33.333 0.00 0.00 0.00 3.49
3867 9842 8.056571 GCGTAGTTGTGTTTATTAAGATAGCAG 58.943 37.037 0.00 0.00 0.00 4.24
3868 9843 8.056571 CGTAGTTGTGTTTATTAAGATAGCAGC 58.943 37.037 0.00 0.00 0.00 5.25
3869 9844 9.099454 GTAGTTGTGTTTATTAAGATAGCAGCT 57.901 33.333 0.00 0.00 0.00 4.24
3870 9845 7.978982 AGTTGTGTTTATTAAGATAGCAGCTG 58.021 34.615 10.11 10.11 0.00 4.24
3871 9846 6.363577 TGTGTTTATTAAGATAGCAGCTGC 57.636 37.500 31.53 31.53 42.49 5.25
3884 9859 1.529438 GCAGCTGCGTAGTTGTGTTTA 59.471 47.619 25.23 0.00 37.45 2.01
3968 13677 2.951642 GGCTGCATTATTCCTAGCAACA 59.048 45.455 0.50 0.00 36.44 3.33
4034 13750 8.814038 ATTGACTAGCTTTTGTATGGAAGAAT 57.186 30.769 0.00 0.00 0.00 2.40
4092 14711 3.194861 TGCGTGCATACCTAGATCAAAC 58.805 45.455 0.00 0.00 0.00 2.93
4189 14808 4.026407 GCTCGCGACATGGTTTAATTTAC 58.974 43.478 3.71 0.00 0.00 2.01
4209 14828 2.377136 AACTCCGGTTCATCCTGCT 58.623 52.632 0.00 0.00 0.00 4.24
4239 14858 5.127682 AGAAAGCATCCTTGACAAACAAACT 59.872 36.000 0.00 0.00 38.08 2.66
4256 14875 1.143813 ACTGATTGCCTATCCCCCAG 58.856 55.000 0.00 0.00 31.87 4.45
4295 14914 8.042515 ACCGAATCCAAATGATTTTGAAATGAT 58.957 29.630 0.00 0.00 43.81 2.45
4322 14941 3.631250 TCCAAAACAATATGGAGGAGCC 58.369 45.455 0.00 0.00 40.74 4.70
4330 14949 3.811702 TGGAGGAGCCAAGGAGTG 58.188 61.111 0.00 0.00 45.87 3.51
4347 14966 2.993853 GGGAGGCCCAGAAGACAG 59.006 66.667 0.00 0.00 44.65 3.51
4348 14967 2.270527 GGAGGCCCAGAAGACAGC 59.729 66.667 0.00 0.00 0.00 4.40
4349 14968 2.125350 GAGGCCCAGAAGACAGCG 60.125 66.667 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.440784 GTTCACATATTTAACAAAAGTTCACGA 57.559 29.630 0.00 0.00 0.00 4.35
9 10 9.445786 AGTTCACATATTTAACAAAAGTTCACG 57.554 29.630 0.00 0.00 0.00 4.35
93 94 9.733219 ACGAAAATGATTTGCAATTTCAAAAAT 57.267 22.222 17.90 2.53 43.45 1.82
94 95 9.565213 AACGAAAATGATTTGCAATTTCAAAAA 57.435 22.222 17.90 0.31 43.45 1.94
95 96 9.565213 AAACGAAAATGATTTGCAATTTCAAAA 57.435 22.222 17.90 0.00 43.45 2.44
96 97 9.219497 GAAACGAAAATGATTTGCAATTTCAAA 57.781 25.926 17.90 5.72 43.45 2.69
97 98 8.393366 TGAAACGAAAATGATTTGCAATTTCAA 58.607 25.926 16.88 6.70 43.45 2.69
98 99 7.913423 TGAAACGAAAATGATTTGCAATTTCA 58.087 26.923 15.90 15.90 43.45 2.69
99 100 8.833264 CATGAAACGAAAATGATTTGCAATTTC 58.167 29.630 0.00 6.18 41.08 2.17
100 101 8.557864 TCATGAAACGAAAATGATTTGCAATTT 58.442 25.926 0.00 0.00 32.44 1.82
101 102 8.085720 TCATGAAACGAAAATGATTTGCAATT 57.914 26.923 0.00 0.00 0.00 2.32
102 103 7.655236 TCATGAAACGAAAATGATTTGCAAT 57.345 28.000 0.00 0.00 0.00 3.56
103 104 7.474398 TTCATGAAACGAAAATGATTTGCAA 57.526 28.000 5.45 0.00 30.76 4.08
104 105 7.171167 ACATTCATGAAACGAAAATGATTTGCA 59.829 29.630 13.09 0.00 32.86 4.08
105 106 7.512297 ACATTCATGAAACGAAAATGATTTGC 58.488 30.769 13.09 0.00 32.86 3.68
106 107 9.866936 AAACATTCATGAAACGAAAATGATTTG 57.133 25.926 13.09 3.86 32.86 2.32
151 152 7.872113 ATTTGCAAATTCAACCCACTAAAAA 57.128 28.000 18.99 0.00 0.00 1.94
152 153 9.566432 AATATTTGCAAATTCAACCCACTAAAA 57.434 25.926 28.45 6.95 0.00 1.52
153 154 9.566432 AAATATTTGCAAATTCAACCCACTAAA 57.434 25.926 28.45 7.38 0.00 1.85
154 155 9.566432 AAAATATTTGCAAATTCAACCCACTAA 57.434 25.926 28.45 7.59 0.00 2.24
155 156 9.566432 AAAAATATTTGCAAATTCAACCCACTA 57.434 25.926 28.45 8.10 0.00 2.74
156 157 8.351461 CAAAAATATTTGCAAATTCAACCCACT 58.649 29.630 28.45 4.96 39.50 4.00
157 158 8.348507 TCAAAAATATTTGCAAATTCAACCCAC 58.651 29.630 28.45 0.00 44.52 4.61
158 159 8.455903 TCAAAAATATTTGCAAATTCAACCCA 57.544 26.923 28.45 10.29 44.52 4.51
159 160 9.179552 GTTCAAAAATATTTGCAAATTCAACCC 57.820 29.630 28.45 6.75 44.52 4.11
160 161 9.949174 AGTTCAAAAATATTTGCAAATTCAACC 57.051 25.926 28.45 9.17 44.52 3.77
167 168 9.766277 GTTCACAAGTTCAAAAATATTTGCAAA 57.234 25.926 15.44 15.44 44.52 3.68
168 169 9.160496 AGTTCACAAGTTCAAAAATATTTGCAA 57.840 25.926 0.39 0.00 44.52 4.08
169 170 8.715191 AGTTCACAAGTTCAAAAATATTTGCA 57.285 26.923 0.39 0.00 44.52 4.08
181 182 9.698309 TGTTTTTGAAAATAGTTCACAAGTTCA 57.302 25.926 0.00 0.00 0.00 3.18
182 183 9.952341 GTGTTTTTGAAAATAGTTCACAAGTTC 57.048 29.630 0.00 0.00 0.00 3.01
183 184 9.482627 TGTGTTTTTGAAAATAGTTCACAAGTT 57.517 25.926 6.95 0.00 31.36 2.66
184 185 9.482627 TTGTGTTTTTGAAAATAGTTCACAAGT 57.517 25.926 13.62 0.00 36.16 3.16
187 188 9.482627 AGTTTGTGTTTTTGAAAATAGTTCACA 57.517 25.926 0.00 5.84 31.98 3.58
217 218 9.932699 CAATTTAAAACATGCTTGTGAATTCAA 57.067 25.926 10.35 0.00 35.83 2.69
218 219 9.322773 TCAATTTAAAACATGCTTGTGAATTCA 57.677 25.926 3.38 3.38 35.83 2.57
316 317 9.362911 CAAAAATGTTCGCGAATTCAAAAATTA 57.637 25.926 26.23 0.00 35.21 1.40
317 318 7.375544 CCAAAAATGTTCGCGAATTCAAAAATT 59.624 29.630 26.23 12.62 37.80 1.82
318 319 6.850317 CCAAAAATGTTCGCGAATTCAAAAAT 59.150 30.769 26.23 7.52 0.00 1.82
319 320 6.036083 TCCAAAAATGTTCGCGAATTCAAAAA 59.964 30.769 26.23 5.48 0.00 1.94
320 321 5.520288 TCCAAAAATGTTCGCGAATTCAAAA 59.480 32.000 26.23 7.25 0.00 2.44
321 322 5.043903 TCCAAAAATGTTCGCGAATTCAAA 58.956 33.333 26.23 9.05 0.00 2.69
322 323 4.611943 TCCAAAAATGTTCGCGAATTCAA 58.388 34.783 26.23 11.61 0.00 2.69
323 324 4.230314 TCCAAAAATGTTCGCGAATTCA 57.770 36.364 26.23 19.30 0.00 2.57
324 325 5.761818 ATTCCAAAAATGTTCGCGAATTC 57.238 34.783 26.23 13.74 0.00 2.17
325 326 6.018343 ACAAATTCCAAAAATGTTCGCGAATT 60.018 30.769 26.23 13.56 31.59 2.17
326 327 5.465056 ACAAATTCCAAAAATGTTCGCGAAT 59.535 32.000 26.23 7.03 0.00 3.34
327 328 4.806247 ACAAATTCCAAAAATGTTCGCGAA 59.194 33.333 19.38 19.38 0.00 4.70
328 329 4.208047 CACAAATTCCAAAAATGTTCGCGA 59.792 37.500 3.71 3.71 0.00 5.87
329 330 4.208047 TCACAAATTCCAAAAATGTTCGCG 59.792 37.500 0.00 0.00 0.00 5.87
330 331 5.649602 TCACAAATTCCAAAAATGTTCGC 57.350 34.783 0.00 0.00 0.00 4.70
377 378 7.149569 TGCAAATTGAAAAATTGTTCCACAA 57.850 28.000 5.90 0.00 42.95 3.33
378 379 6.748333 TGCAAATTGAAAAATTGTTCCACA 57.252 29.167 5.90 0.00 0.00 4.17
379 380 9.896263 AATATGCAAATTGAAAAATTGTTCCAC 57.104 25.926 5.90 0.00 0.00 4.02
397 398 9.371136 TGTTTGTAGTTTCACAAAAATATGCAA 57.629 25.926 3.19 0.00 46.81 4.08
398 399 8.932945 TGTTTGTAGTTTCACAAAAATATGCA 57.067 26.923 3.19 0.00 46.81 3.96
425 426 6.092670 TGTTCACAAATGCCAAATTCGAAAAA 59.907 30.769 0.00 0.00 0.00 1.94
426 427 5.582269 TGTTCACAAATGCCAAATTCGAAAA 59.418 32.000 0.00 0.00 0.00 2.29
427 428 5.111989 TGTTCACAAATGCCAAATTCGAAA 58.888 33.333 0.00 0.00 0.00 3.46
428 429 4.686972 TGTTCACAAATGCCAAATTCGAA 58.313 34.783 0.00 0.00 0.00 3.71
429 430 4.313277 TGTTCACAAATGCCAAATTCGA 57.687 36.364 0.00 0.00 0.00 3.71
430 431 5.594724 AATGTTCACAAATGCCAAATTCG 57.405 34.783 0.00 0.00 0.00 3.34
467 468 9.830294 CTTCATTTCTTTTTGTTTTTCTTGCTT 57.170 25.926 0.00 0.00 0.00 3.91
468 469 9.218440 TCTTCATTTCTTTTTGTTTTTCTTGCT 57.782 25.926 0.00 0.00 0.00 3.91
469 470 9.824534 TTCTTCATTTCTTTTTGTTTTTCTTGC 57.175 25.926 0.00 0.00 0.00 4.01
473 474 9.249844 CGTGTTCTTCATTTCTTTTTGTTTTTC 57.750 29.630 0.00 0.00 0.00 2.29
474 475 8.983724 TCGTGTTCTTCATTTCTTTTTGTTTTT 58.016 25.926 0.00 0.00 0.00 1.94
475 476 8.527567 TCGTGTTCTTCATTTCTTTTTGTTTT 57.472 26.923 0.00 0.00 0.00 2.43
476 477 8.527567 TTCGTGTTCTTCATTTCTTTTTGTTT 57.472 26.923 0.00 0.00 0.00 2.83
477 478 8.527567 TTTCGTGTTCTTCATTTCTTTTTGTT 57.472 26.923 0.00 0.00 0.00 2.83
478 479 7.812669 ACTTTCGTGTTCTTCATTTCTTTTTGT 59.187 29.630 0.00 0.00 0.00 2.83
479 480 8.173321 ACTTTCGTGTTCTTCATTTCTTTTTG 57.827 30.769 0.00 0.00 0.00 2.44
480 481 9.849166 TTACTTTCGTGTTCTTCATTTCTTTTT 57.151 25.926 0.00 0.00 0.00 1.94
481 482 9.849166 TTTACTTTCGTGTTCTTCATTTCTTTT 57.151 25.926 0.00 0.00 0.00 2.27
482 483 9.285770 GTTTACTTTCGTGTTCTTCATTTCTTT 57.714 29.630 0.00 0.00 0.00 2.52
483 484 8.455682 TGTTTACTTTCGTGTTCTTCATTTCTT 58.544 29.630 0.00 0.00 0.00 2.52
484 485 7.908601 GTGTTTACTTTCGTGTTCTTCATTTCT 59.091 33.333 0.00 0.00 0.00 2.52
485 486 7.694784 TGTGTTTACTTTCGTGTTCTTCATTTC 59.305 33.333 0.00 0.00 0.00 2.17
486 487 7.531716 TGTGTTTACTTTCGTGTTCTTCATTT 58.468 30.769 0.00 0.00 0.00 2.32
487 488 7.079182 TGTGTTTACTTTCGTGTTCTTCATT 57.921 32.000 0.00 0.00 0.00 2.57
488 489 6.238374 CCTGTGTTTACTTTCGTGTTCTTCAT 60.238 38.462 0.00 0.00 0.00 2.57
489 490 5.064198 CCTGTGTTTACTTTCGTGTTCTTCA 59.936 40.000 0.00 0.00 0.00 3.02
490 491 5.499047 CCTGTGTTTACTTTCGTGTTCTTC 58.501 41.667 0.00 0.00 0.00 2.87
491 492 4.334481 CCCTGTGTTTACTTTCGTGTTCTT 59.666 41.667 0.00 0.00 0.00 2.52
492 493 3.875134 CCCTGTGTTTACTTTCGTGTTCT 59.125 43.478 0.00 0.00 0.00 3.01
493 494 3.547413 GCCCTGTGTTTACTTTCGTGTTC 60.547 47.826 0.00 0.00 0.00 3.18
494 495 2.356695 GCCCTGTGTTTACTTTCGTGTT 59.643 45.455 0.00 0.00 0.00 3.32
495 496 1.944709 GCCCTGTGTTTACTTTCGTGT 59.055 47.619 0.00 0.00 0.00 4.49
496 497 1.070175 CGCCCTGTGTTTACTTTCGTG 60.070 52.381 0.00 0.00 0.00 4.35
497 498 1.223187 CGCCCTGTGTTTACTTTCGT 58.777 50.000 0.00 0.00 0.00 3.85
498 499 0.110373 GCGCCCTGTGTTTACTTTCG 60.110 55.000 0.00 0.00 0.00 3.46
499 500 0.240145 GGCGCCCTGTGTTTACTTTC 59.760 55.000 18.11 0.00 0.00 2.62
500 501 1.176619 GGGCGCCCTGTGTTTACTTT 61.177 55.000 38.76 0.00 0.00 2.66
501 502 1.602605 GGGCGCCCTGTGTTTACTT 60.603 57.895 38.76 0.00 0.00 2.24
502 503 2.033602 GGGCGCCCTGTGTTTACT 59.966 61.111 38.76 0.00 0.00 2.24
503 504 3.060000 GGGGCGCCCTGTGTTTAC 61.060 66.667 42.70 21.56 41.34 2.01
504 505 4.708386 CGGGGCGCCCTGTGTTTA 62.708 66.667 41.29 0.00 42.67 2.01
526 527 4.776322 TCGGATGGCCCAAGTGCG 62.776 66.667 0.00 0.66 34.14 5.34
527 528 1.531739 TTTTCGGATGGCCCAAGTGC 61.532 55.000 0.00 0.00 34.14 4.40
528 529 0.243636 GTTTTCGGATGGCCCAAGTG 59.756 55.000 0.00 0.00 34.14 3.16
529 530 0.178975 TGTTTTCGGATGGCCCAAGT 60.179 50.000 0.00 0.00 34.14 3.16
530 531 0.243636 GTGTTTTCGGATGGCCCAAG 59.756 55.000 0.00 0.00 34.14 3.61
531 532 0.178975 AGTGTTTTCGGATGGCCCAA 60.179 50.000 0.00 0.00 34.14 4.12
532 533 0.608035 GAGTGTTTTCGGATGGCCCA 60.608 55.000 0.00 0.00 34.14 5.36
533 534 1.644786 CGAGTGTTTTCGGATGGCCC 61.645 60.000 0.00 0.00 36.95 5.80
534 535 1.794222 CGAGTGTTTTCGGATGGCC 59.206 57.895 0.00 0.00 36.95 5.36
535 536 1.134694 GCGAGTGTTTTCGGATGGC 59.865 57.895 0.00 0.00 40.79 4.40
536 537 0.165944 GTGCGAGTGTTTTCGGATGG 59.834 55.000 0.00 0.00 42.75 3.51
537 538 0.865111 TGTGCGAGTGTTTTCGGATG 59.135 50.000 0.00 0.00 42.75 3.51
538 539 1.588674 TTGTGCGAGTGTTTTCGGAT 58.411 45.000 0.00 0.00 42.75 4.18
539 540 1.329292 CTTTGTGCGAGTGTTTTCGGA 59.671 47.619 0.00 0.00 40.79 4.55
540 541 1.596954 CCTTTGTGCGAGTGTTTTCGG 60.597 52.381 0.00 0.00 40.79 4.30
541 542 1.596954 CCCTTTGTGCGAGTGTTTTCG 60.597 52.381 0.00 0.00 43.23 3.46
542 543 1.269051 CCCCTTTGTGCGAGTGTTTTC 60.269 52.381 0.00 0.00 0.00 2.29
543 544 0.744281 CCCCTTTGTGCGAGTGTTTT 59.256 50.000 0.00 0.00 0.00 2.43
544 545 1.106944 CCCCCTTTGTGCGAGTGTTT 61.107 55.000 0.00 0.00 0.00 2.83
545 546 1.528309 CCCCCTTTGTGCGAGTGTT 60.528 57.895 0.00 0.00 0.00 3.32
546 547 2.113139 CCCCCTTTGTGCGAGTGT 59.887 61.111 0.00 0.00 0.00 3.55
583 584 3.820467 TGTGCGATGGAAAGTCAAGAATT 59.180 39.130 0.00 0.00 0.00 2.17
584 585 3.411446 TGTGCGATGGAAAGTCAAGAAT 58.589 40.909 0.00 0.00 0.00 2.40
585 586 2.844946 TGTGCGATGGAAAGTCAAGAA 58.155 42.857 0.00 0.00 0.00 2.52
586 587 2.542020 TGTGCGATGGAAAGTCAAGA 57.458 45.000 0.00 0.00 0.00 3.02
587 588 2.350772 GGTTGTGCGATGGAAAGTCAAG 60.351 50.000 0.00 0.00 0.00 3.02
588 589 1.606668 GGTTGTGCGATGGAAAGTCAA 59.393 47.619 0.00 0.00 0.00 3.18
589 590 1.234821 GGTTGTGCGATGGAAAGTCA 58.765 50.000 0.00 0.00 0.00 3.41
590 591 0.521735 GGGTTGTGCGATGGAAAGTC 59.478 55.000 0.00 0.00 0.00 3.01
591 592 1.234615 CGGGTTGTGCGATGGAAAGT 61.235 55.000 0.00 0.00 0.00 2.66
592 593 0.953471 TCGGGTTGTGCGATGGAAAG 60.953 55.000 0.00 0.00 0.00 2.62
593 594 0.953471 CTCGGGTTGTGCGATGGAAA 60.953 55.000 0.00 0.00 0.00 3.13
594 595 1.375396 CTCGGGTTGTGCGATGGAA 60.375 57.895 0.00 0.00 0.00 3.53
595 596 2.264480 CTCGGGTTGTGCGATGGA 59.736 61.111 0.00 0.00 0.00 3.41
596 597 2.796483 TTCCTCGGGTTGTGCGATGG 62.796 60.000 0.00 0.00 0.00 3.51
597 598 0.744414 ATTCCTCGGGTTGTGCGATG 60.744 55.000 0.00 0.00 0.00 3.84
598 599 0.828022 TATTCCTCGGGTTGTGCGAT 59.172 50.000 0.00 0.00 0.00 4.58
599 600 0.174845 CTATTCCTCGGGTTGTGCGA 59.825 55.000 0.00 0.00 0.00 5.10
600 601 0.810031 CCTATTCCTCGGGTTGTGCG 60.810 60.000 0.00 0.00 0.00 5.34
601 602 0.463833 CCCTATTCCTCGGGTTGTGC 60.464 60.000 0.00 0.00 35.65 4.57
602 603 0.180406 CCCCTATTCCTCGGGTTGTG 59.820 60.000 0.00 0.00 38.88 3.33
603 604 0.986550 CCCCCTATTCCTCGGGTTGT 60.987 60.000 0.00 0.00 38.88 3.32
604 605 1.837090 CCCCCTATTCCTCGGGTTG 59.163 63.158 0.00 0.00 38.88 3.77
605 606 4.413074 CCCCCTATTCCTCGGGTT 57.587 61.111 0.00 0.00 38.88 4.11
620 621 1.660167 GTGCACGAAATACTACCCCC 58.340 55.000 0.00 0.00 0.00 5.40
621 622 1.065998 TGGTGCACGAAATACTACCCC 60.066 52.381 11.45 0.00 0.00 4.95
622 623 2.277084 CTGGTGCACGAAATACTACCC 58.723 52.381 11.45 0.00 0.00 3.69
623 624 2.968675 ACTGGTGCACGAAATACTACC 58.031 47.619 11.45 0.00 0.00 3.18
624 625 3.861689 GGTACTGGTGCACGAAATACTAC 59.138 47.826 11.45 3.27 0.00 2.73
625 626 3.510753 TGGTACTGGTGCACGAAATACTA 59.489 43.478 11.45 7.71 0.00 1.82
626 627 2.300723 TGGTACTGGTGCACGAAATACT 59.699 45.455 11.45 0.00 0.00 2.12
627 628 2.414138 GTGGTACTGGTGCACGAAATAC 59.586 50.000 11.45 11.84 0.00 1.89
628 629 2.613474 GGTGGTACTGGTGCACGAAATA 60.613 50.000 11.45 0.00 0.00 1.40
629 630 1.519408 GTGGTACTGGTGCACGAAAT 58.481 50.000 11.45 0.38 0.00 2.17
630 631 0.533308 GGTGGTACTGGTGCACGAAA 60.533 55.000 11.45 0.00 0.00 3.46
631 632 1.070105 GGTGGTACTGGTGCACGAA 59.930 57.895 11.45 0.13 0.00 3.85
632 633 2.738480 GGTGGTACTGGTGCACGA 59.262 61.111 11.45 5.97 0.00 4.35
633 634 2.736995 CGGTGGTACTGGTGCACG 60.737 66.667 11.45 0.00 0.00 5.34
634 635 2.358247 CCGGTGGTACTGGTGCAC 60.358 66.667 8.80 8.80 39.82 4.57
635 636 4.323477 GCCGGTGGTACTGGTGCA 62.323 66.667 1.90 0.00 46.46 4.57
636 637 4.323477 TGCCGGTGGTACTGGTGC 62.323 66.667 1.90 0.00 46.46 5.01
637 638 2.358247 GTGCCGGTGGTACTGGTG 60.358 66.667 1.90 0.00 46.46 4.17
638 639 2.845317 TGTGCCGGTGGTACTGGT 60.845 61.111 1.90 0.00 46.46 4.00
640 641 2.736995 CGTGTGCCGGTGGTACTG 60.737 66.667 1.90 0.00 39.07 2.74
641 642 3.228759 ACGTGTGCCGGTGGTACT 61.229 61.111 1.90 0.00 39.07 2.73
642 643 3.039588 CACGTGTGCCGGTGGTAC 61.040 66.667 7.58 0.00 42.24 3.34
662 663 3.816613 CATTTTAAAATGCGCTACGGC 57.183 42.857 24.00 0.00 39.29 5.68
700 701 9.793252 GATATTGTGTCAATGTGCTAGATTTTT 57.207 29.630 0.00 0.00 0.00 1.94
701 702 8.959548 TGATATTGTGTCAATGTGCTAGATTTT 58.040 29.630 0.00 0.00 0.00 1.82
702 703 8.510243 TGATATTGTGTCAATGTGCTAGATTT 57.490 30.769 0.00 0.00 0.00 2.17
703 704 8.510243 TTGATATTGTGTCAATGTGCTAGATT 57.490 30.769 0.00 0.00 31.07 2.40
704 705 8.687292 ATTGATATTGTGTCAATGTGCTAGAT 57.313 30.769 0.00 0.00 42.87 1.98
714 715 9.007901 TGACAACATACATTGATATTGTGTCAA 57.992 29.630 0.00 0.00 39.65 3.18
715 716 8.450180 GTGACAACATACATTGATATTGTGTCA 58.550 33.333 0.00 0.00 35.42 3.58
716 717 8.450180 TGTGACAACATACATTGATATTGTGTC 58.550 33.333 0.00 0.00 33.57 3.67
717 718 8.334263 TGTGACAACATACATTGATATTGTGT 57.666 30.769 0.00 0.00 33.57 3.72
718 719 9.623350 TTTGTGACAACATACATTGATATTGTG 57.377 29.630 0.00 0.00 35.83 3.33
724 725 9.033481 CAAAGTTTTGTGACAACATACATTGAT 57.967 29.630 12.83 0.00 34.83 2.57
725 726 8.404889 CAAAGTTTTGTGACAACATACATTGA 57.595 30.769 12.83 0.00 34.83 2.57
750 751 9.749490 CTCATGCAATGTTTCAAATTTTGATAC 57.251 29.630 19.62 19.62 46.80 2.24
751 752 9.708092 TCTCATGCAATGTTTCAAATTTTGATA 57.292 25.926 12.39 5.51 46.80 2.15
752 753 8.610248 TCTCATGCAATGTTTCAAATTTTGAT 57.390 26.923 12.39 0.00 46.80 2.57
753 754 8.610248 ATCTCATGCAATGTTTCAAATTTTGA 57.390 26.923 7.74 7.74 46.80 2.69
754 755 9.749490 GTATCTCATGCAATGTTTCAAATTTTG 57.251 29.630 2.59 2.59 46.80 2.44
755 756 9.491675 TGTATCTCATGCAATGTTTCAAATTTT 57.508 25.926 0.00 0.00 46.80 1.82
756 757 9.491675 TTGTATCTCATGCAATGTTTCAAATTT 57.508 25.926 0.00 0.00 46.80 1.82
757 758 9.491675 TTTGTATCTCATGCAATGTTTCAAATT 57.508 25.926 0.00 0.00 46.80 1.82
758 759 9.491675 TTTTGTATCTCATGCAATGTTTCAAAT 57.508 25.926 0.00 0.00 46.80 2.32
759 760 8.883954 TTTTGTATCTCATGCAATGTTTCAAA 57.116 26.923 0.00 0.00 46.80 2.69
760 761 9.491675 AATTTTGTATCTCATGCAATGTTTCAA 57.508 25.926 0.00 0.00 46.80 2.69
761 762 8.927721 CAATTTTGTATCTCATGCAATGTTTCA 58.072 29.630 0.00 0.00 46.80 2.69
762 763 9.142515 TCAATTTTGTATCTCATGCAATGTTTC 57.857 29.630 0.00 0.00 46.80 2.78
763 764 9.491675 TTCAATTTTGTATCTCATGCAATGTTT 57.508 25.926 0.00 0.00 46.80 2.83
764 765 9.491675 TTTCAATTTTGTATCTCATGCAATGTT 57.508 25.926 0.00 0.00 46.80 2.71
765 766 9.491675 TTTTCAATTTTGTATCTCATGCAATGT 57.508 25.926 0.00 0.00 46.80 2.71
779 780 9.991388 CACTGATGTCAAAATTTTCAATTTTGT 57.009 25.926 24.03 12.40 44.73 2.83
780 781 9.991388 ACACTGATGTCAAAATTTTCAATTTTG 57.009 25.926 21.15 21.15 45.40 2.44
781 782 9.991388 CACACTGATGTCAAAATTTTCAATTTT 57.009 25.926 0.00 2.03 36.72 1.82
782 783 9.381033 TCACACTGATGTCAAAATTTTCAATTT 57.619 25.926 0.00 0.00 36.72 1.82
783 784 8.945481 TCACACTGATGTCAAAATTTTCAATT 57.055 26.923 0.00 0.00 36.72 2.32
788 789 9.985730 ACATTATCACACTGATGTCAAAATTTT 57.014 25.926 0.00 0.00 37.70 1.82
789 790 9.414295 CACATTATCACACTGATGTCAAAATTT 57.586 29.630 0.00 0.00 37.70 1.82
790 791 7.543172 GCACATTATCACACTGATGTCAAAATT 59.457 33.333 0.00 0.00 37.70 1.82
791 792 7.031372 GCACATTATCACACTGATGTCAAAAT 58.969 34.615 0.00 0.00 37.70 1.82
792 793 6.380995 GCACATTATCACACTGATGTCAAAA 58.619 36.000 0.00 0.00 37.70 2.44
793 794 5.106197 GGCACATTATCACACTGATGTCAAA 60.106 40.000 0.00 0.00 37.70 2.69
794 795 4.395854 GGCACATTATCACACTGATGTCAA 59.604 41.667 0.00 0.00 37.70 3.18
795 796 3.940852 GGCACATTATCACACTGATGTCA 59.059 43.478 0.00 0.00 37.70 3.58
796 797 3.940852 TGGCACATTATCACACTGATGTC 59.059 43.478 0.00 0.00 37.70 3.06
797 798 3.954200 TGGCACATTATCACACTGATGT 58.046 40.909 0.00 0.00 37.70 3.06
798 799 4.968812 TTGGCACATTATCACACTGATG 57.031 40.909 0.00 0.00 36.32 3.07
799 800 5.981088 TTTTGGCACATTATCACACTGAT 57.019 34.783 0.00 0.00 38.56 2.90
800 801 5.508825 GGTTTTTGGCACATTATCACACTGA 60.509 40.000 0.00 0.00 39.30 3.41
801 802 4.685628 GGTTTTTGGCACATTATCACACTG 59.314 41.667 0.00 0.00 39.30 3.66
802 803 4.262420 GGGTTTTTGGCACATTATCACACT 60.262 41.667 0.00 0.00 39.30 3.55
803 804 3.993736 GGGTTTTTGGCACATTATCACAC 59.006 43.478 0.00 0.00 39.30 3.82
804 805 3.643320 TGGGTTTTTGGCACATTATCACA 59.357 39.130 0.00 0.00 39.30 3.58
805 806 3.993736 GTGGGTTTTTGGCACATTATCAC 59.006 43.478 0.00 0.00 39.30 3.06
806 807 3.007398 GGTGGGTTTTTGGCACATTATCA 59.993 43.478 0.00 0.00 39.30 2.15
807 808 3.260632 AGGTGGGTTTTTGGCACATTATC 59.739 43.478 0.00 0.00 39.30 1.75
808 809 3.247162 AGGTGGGTTTTTGGCACATTAT 58.753 40.909 0.00 0.00 39.30 1.28
809 810 2.683768 AGGTGGGTTTTTGGCACATTA 58.316 42.857 0.00 0.00 39.30 1.90
810 811 1.506025 AGGTGGGTTTTTGGCACATT 58.494 45.000 0.00 0.00 39.30 2.71
811 812 1.506025 AAGGTGGGTTTTTGGCACAT 58.494 45.000 0.00 0.00 39.30 3.21
812 813 2.160721 TAAGGTGGGTTTTTGGCACA 57.839 45.000 0.00 0.00 0.00 4.57
813 814 2.367241 ACATAAGGTGGGTTTTTGGCAC 59.633 45.455 0.00 0.00 0.00 5.01
814 815 2.683768 ACATAAGGTGGGTTTTTGGCA 58.316 42.857 0.00 0.00 0.00 4.92
815 816 3.762407 AACATAAGGTGGGTTTTTGGC 57.238 42.857 0.00 0.00 0.00 4.52
816 817 5.029807 ACAAACATAAGGTGGGTTTTTGG 57.970 39.130 0.00 0.00 32.79 3.28
817 818 6.811954 AGTACAAACATAAGGTGGGTTTTTG 58.188 36.000 0.00 0.00 32.79 2.44
818 819 8.715190 ATAGTACAAACATAAGGTGGGTTTTT 57.285 30.769 0.00 0.00 32.79 1.94
819 820 8.715190 AATAGTACAAACATAAGGTGGGTTTT 57.285 30.769 0.00 0.00 32.79 2.43
820 821 7.945664 TGAATAGTACAAACATAAGGTGGGTTT 59.054 33.333 0.00 0.00 35.27 3.27
821 822 7.463431 TGAATAGTACAAACATAAGGTGGGTT 58.537 34.615 0.00 0.00 0.00 4.11
822 823 7.023171 TGAATAGTACAAACATAAGGTGGGT 57.977 36.000 0.00 0.00 0.00 4.51
823 824 8.405531 CAATGAATAGTACAAACATAAGGTGGG 58.594 37.037 0.00 0.00 0.00 4.61
824 825 8.956426 ACAATGAATAGTACAAACATAAGGTGG 58.044 33.333 0.00 0.00 0.00 4.61
866 867 4.869215 TCCGAAACATTGTACGACTTACA 58.131 39.130 14.74 0.00 39.05 2.41
867 868 6.399204 AATCCGAAACATTGTACGACTTAC 57.601 37.500 14.74 0.00 0.00 2.34
868 869 7.292292 CAAAATCCGAAACATTGTACGACTTA 58.708 34.615 14.74 2.45 0.00 2.24
869 870 5.934935 AAATCCGAAACATTGTACGACTT 57.065 34.783 14.74 7.32 0.00 3.01
870 871 5.685841 CAAAATCCGAAACATTGTACGACT 58.314 37.500 14.74 2.90 0.00 4.18
871 872 4.319901 GCAAAATCCGAAACATTGTACGAC 59.680 41.667 14.74 0.00 0.00 4.34
872 873 4.468643 GCAAAATCCGAAACATTGTACGA 58.531 39.130 14.74 0.00 0.00 3.43
873 874 3.296943 CGCAAAATCCGAAACATTGTACG 59.703 43.478 8.62 8.62 0.00 3.67
874 875 4.319901 GTCGCAAAATCCGAAACATTGTAC 59.680 41.667 0.00 0.00 36.36 2.90
875 876 4.023963 TGTCGCAAAATCCGAAACATTGTA 60.024 37.500 0.00 0.00 36.36 2.41
876 877 3.243234 TGTCGCAAAATCCGAAACATTGT 60.243 39.130 0.00 0.00 36.36 2.71
877 878 3.304257 TGTCGCAAAATCCGAAACATTG 58.696 40.909 0.00 0.00 36.36 2.82
878 879 3.564511 CTGTCGCAAAATCCGAAACATT 58.435 40.909 0.00 0.00 36.36 2.71
879 880 2.668279 GCTGTCGCAAAATCCGAAACAT 60.668 45.455 0.00 0.00 36.36 2.71
880 881 1.334599 GCTGTCGCAAAATCCGAAACA 60.335 47.619 0.00 0.00 36.36 2.83
881 882 1.327507 GCTGTCGCAAAATCCGAAAC 58.672 50.000 0.00 0.00 36.36 2.78
882 883 0.947960 TGCTGTCGCAAAATCCGAAA 59.052 45.000 0.00 0.00 44.62 3.46
883 884 2.622965 TGCTGTCGCAAAATCCGAA 58.377 47.368 0.00 0.00 44.62 4.30
884 885 4.370182 TGCTGTCGCAAAATCCGA 57.630 50.000 0.00 0.00 44.62 4.55
893 894 0.249073 ACATCGGTCTATGCTGTCGC 60.249 55.000 0.00 0.00 0.00 5.19
894 895 1.854743 CAACATCGGTCTATGCTGTCG 59.145 52.381 0.00 0.00 0.00 4.35
895 896 2.604914 CACAACATCGGTCTATGCTGTC 59.395 50.000 0.00 0.00 34.72 3.51
896 897 2.028112 ACACAACATCGGTCTATGCTGT 60.028 45.455 0.00 0.00 36.79 4.40
897 898 2.349580 CACACAACATCGGTCTATGCTG 59.650 50.000 0.00 0.00 0.00 4.41
898 899 2.233676 TCACACAACATCGGTCTATGCT 59.766 45.455 0.00 0.00 0.00 3.79
899 900 2.616960 TCACACAACATCGGTCTATGC 58.383 47.619 0.00 0.00 0.00 3.14
900 901 4.494690 GCATTCACACAACATCGGTCTATG 60.495 45.833 0.00 0.00 0.00 2.23
901 902 3.623060 GCATTCACACAACATCGGTCTAT 59.377 43.478 0.00 0.00 0.00 1.98
902 903 3.000041 GCATTCACACAACATCGGTCTA 59.000 45.455 0.00 0.00 0.00 2.59
903 904 1.806542 GCATTCACACAACATCGGTCT 59.193 47.619 0.00 0.00 0.00 3.85
904 905 1.535028 TGCATTCACACAACATCGGTC 59.465 47.619 0.00 0.00 0.00 4.79
905 906 1.266718 GTGCATTCACACAACATCGGT 59.733 47.619 0.00 0.00 42.66 4.69
906 907 1.401409 GGTGCATTCACACAACATCGG 60.401 52.381 0.00 0.00 44.87 4.18
907 908 1.266446 TGGTGCATTCACACAACATCG 59.734 47.619 0.00 0.00 44.87 3.84
908 909 2.553602 TCTGGTGCATTCACACAACATC 59.446 45.455 0.00 0.00 44.87 3.06
909 910 2.585330 TCTGGTGCATTCACACAACAT 58.415 42.857 0.00 0.00 44.87 2.71
910 911 2.049888 TCTGGTGCATTCACACAACA 57.950 45.000 0.00 0.00 44.87 3.33
911 912 2.937591 CATCTGGTGCATTCACACAAC 58.062 47.619 0.00 0.00 44.87 3.32
923 924 1.091771 GGGACGTGATGCATCTGGTG 61.092 60.000 26.32 15.37 0.00 4.17
924 925 1.221840 GGGACGTGATGCATCTGGT 59.778 57.895 26.32 22.23 0.00 4.00
925 926 0.531532 GAGGGACGTGATGCATCTGG 60.532 60.000 26.32 19.42 0.00 3.86
926 927 0.531532 GGAGGGACGTGATGCATCTG 60.532 60.000 26.32 20.26 28.99 2.90
927 928 1.690219 GGGAGGGACGTGATGCATCT 61.690 60.000 26.32 7.47 28.99 2.90
928 929 1.227674 GGGAGGGACGTGATGCATC 60.228 63.158 20.14 20.14 0.00 3.91
929 930 2.746375 GGGGAGGGACGTGATGCAT 61.746 63.158 0.00 0.00 0.00 3.96
930 931 2.523740 TAGGGGAGGGACGTGATGCA 62.524 60.000 0.00 0.00 0.00 3.96
931 932 1.335132 TTAGGGGAGGGACGTGATGC 61.335 60.000 0.00 0.00 0.00 3.91
932 933 1.200519 TTTAGGGGAGGGACGTGATG 58.799 55.000 0.00 0.00 0.00 3.07
933 934 1.961133 TTTTAGGGGAGGGACGTGAT 58.039 50.000 0.00 0.00 0.00 3.06
934 935 1.732117 TTTTTAGGGGAGGGACGTGA 58.268 50.000 0.00 0.00 0.00 4.35
952 953 3.768878 TGTTGTGGTCGGGGATATTTTT 58.231 40.909 0.00 0.00 0.00 1.94
953 954 3.443145 TGTTGTGGTCGGGGATATTTT 57.557 42.857 0.00 0.00 0.00 1.82
954 955 3.086282 GTTGTTGTGGTCGGGGATATTT 58.914 45.455 0.00 0.00 0.00 1.40
955 956 2.307686 AGTTGTTGTGGTCGGGGATATT 59.692 45.455 0.00 0.00 0.00 1.28
956 957 1.913419 AGTTGTTGTGGTCGGGGATAT 59.087 47.619 0.00 0.00 0.00 1.63
957 958 1.354101 AGTTGTTGTGGTCGGGGATA 58.646 50.000 0.00 0.00 0.00 2.59
958 959 0.476771 AAGTTGTTGTGGTCGGGGAT 59.523 50.000 0.00 0.00 0.00 3.85
959 960 0.179040 GAAGTTGTTGTGGTCGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
960 961 0.464735 TGAAGTTGTTGTGGTCGGGG 60.465 55.000 0.00 0.00 0.00 5.73
961 962 0.661020 GTGAAGTTGTTGTGGTCGGG 59.339 55.000 0.00 0.00 0.00 5.14
962 963 0.303493 CGTGAAGTTGTTGTGGTCGG 59.697 55.000 0.00 0.00 0.00 4.79
963 964 0.315869 GCGTGAAGTTGTTGTGGTCG 60.316 55.000 0.00 0.00 0.00 4.79
964 965 0.028902 GGCGTGAAGTTGTTGTGGTC 59.971 55.000 0.00 0.00 0.00 4.02
965 966 0.393808 AGGCGTGAAGTTGTTGTGGT 60.394 50.000 0.00 0.00 0.00 4.16
966 967 0.029300 CAGGCGTGAAGTTGTTGTGG 59.971 55.000 0.00 0.00 0.00 4.17
967 968 0.732571 ACAGGCGTGAAGTTGTTGTG 59.267 50.000 14.38 0.00 0.00 3.33
968 969 0.732571 CACAGGCGTGAAGTTGTTGT 59.267 50.000 14.38 0.00 46.80 3.32
969 970 3.532138 CACAGGCGTGAAGTTGTTG 57.468 52.632 14.38 0.00 46.80 3.33
978 979 1.202973 GATCGACGATCACAGGCGTG 61.203 60.000 28.48 4.53 45.08 5.34
981 982 0.382158 TCTGATCGACGATCACAGGC 59.618 55.000 31.37 10.29 43.11 4.85
985 986 1.413382 GCCATCTGATCGACGATCAC 58.587 55.000 31.37 19.72 43.11 3.06
1045 1049 2.124942 GGGCGCTCCTCCTTCTTG 60.125 66.667 7.64 0.00 0.00 3.02
1093 1097 0.895530 TCGACAAGGGATCCAGACAC 59.104 55.000 15.23 0.79 0.00 3.67
1124 1134 2.665000 CTCCATCCACACGGCTGT 59.335 61.111 0.00 0.00 0.00 4.40
1159 1169 0.899720 ATAACAAGCTCGTCGGGGAA 59.100 50.000 0.00 0.00 0.00 3.97
1172 1185 5.029807 TGACACTGTTGAGGACATAACAA 57.970 39.130 0.00 0.00 37.69 2.83
1190 1251 6.127479 GGCAATAATTTCATGGTACCTTGACA 60.127 38.462 25.79 21.04 31.27 3.58
1328 1401 0.039978 AGCTCGCGAATAGTCATCGG 60.040 55.000 11.33 0.00 40.54 4.18
1375 1448 0.905357 CCCTGGGTCTCGTTCAAGAT 59.095 55.000 3.97 0.00 0.00 2.40
1412 1500 3.340034 ACAACGGCCGAATCAGATTTTA 58.660 40.909 35.90 0.00 0.00 1.52
1502 1617 7.092891 TGGTATAAGTGTCAATCTCATCCTTGT 60.093 37.037 0.00 0.00 0.00 3.16
1505 1620 7.437713 TTGGTATAAGTGTCAATCTCATCCT 57.562 36.000 0.00 0.00 0.00 3.24
1512 1627 6.093633 GGTCCAGTTTGGTATAAGTGTCAATC 59.906 42.308 0.00 0.00 39.03 2.67
1608 1723 9.950496 AATAAACAGATAGGAGCATTAGTATGG 57.050 33.333 0.00 0.00 32.15 2.74
1614 1729 9.851686 ATCAACAATAAACAGATAGGAGCATTA 57.148 29.630 0.00 0.00 0.00 1.90
1616 1731 8.216423 AGATCAACAATAAACAGATAGGAGCAT 58.784 33.333 0.00 0.00 0.00 3.79
1618 1733 9.717942 ATAGATCAACAATAAACAGATAGGAGC 57.282 33.333 0.00 0.00 0.00 4.70
1668 1805 4.586421 CAGATGGAGTAGGCACATAAGAGA 59.414 45.833 0.00 0.00 0.00 3.10
1708 2046 2.048127 AGCTCGTCAACCGGCTTC 60.048 61.111 0.00 0.00 39.14 3.86
1726 2067 2.801063 CGTTCCAATGCAACATCATCC 58.199 47.619 0.00 0.00 0.00 3.51
2033 2389 6.426937 GGTTACTCACTTAAAAGTCTGCATGA 59.573 38.462 0.00 0.00 37.08 3.07
2037 2393 6.224584 AGAGGTTACTCACTTAAAAGTCTGC 58.775 40.000 0.00 0.00 46.44 4.26
2038 2394 7.434492 TGAGAGGTTACTCACTTAAAAGTCTG 58.566 38.462 0.00 0.00 46.44 3.51
2039 2395 7.288158 ACTGAGAGGTTACTCACTTAAAAGTCT 59.712 37.037 0.00 0.00 46.44 3.24
2118 2477 7.854166 ATATTTGCTTAATCCCCAAATGCTA 57.146 32.000 7.79 0.00 38.98 3.49
2415 5295 7.173218 TGCAGTTCAAGAAGACCTAAATAACAG 59.827 37.037 0.00 0.00 0.00 3.16
3119 9059 1.078143 AGCCGCCTCCAAATCTGAC 60.078 57.895 0.00 0.00 0.00 3.51
3146 9086 1.153568 TGTAGCGCTGACCTGATGC 60.154 57.895 22.90 0.00 0.00 3.91
3199 9145 6.812656 GCATTCACAAAACACAATCATCCATA 59.187 34.615 0.00 0.00 0.00 2.74
3201 9147 4.989797 GCATTCACAAAACACAATCATCCA 59.010 37.500 0.00 0.00 0.00 3.41
3202 9148 5.232463 AGCATTCACAAAACACAATCATCC 58.768 37.500 0.00 0.00 0.00 3.51
3223 9169 3.559242 CCAAGCATAAGTAGAGAGCAAGC 59.441 47.826 0.00 0.00 0.00 4.01
3351 9303 0.744874 GCCGTACTCCAGCTCATACA 59.255 55.000 0.00 0.00 0.00 2.29
3469 9422 9.485206 CAAAGAAAGAAGACCAAATCAATCAAT 57.515 29.630 0.00 0.00 0.00 2.57
3470 9423 8.477256 ACAAAGAAAGAAGACCAAATCAATCAA 58.523 29.630 0.00 0.00 0.00 2.57
3471 9424 8.010733 ACAAAGAAAGAAGACCAAATCAATCA 57.989 30.769 0.00 0.00 0.00 2.57
3472 9425 9.617975 CTACAAAGAAAGAAGACCAAATCAATC 57.382 33.333 0.00 0.00 0.00 2.67
3855 9830 4.592485 ACTACGCAGCTGCTATCTTAAT 57.408 40.909 34.22 12.72 39.32 1.40
3861 9836 1.066858 ACACAACTACGCAGCTGCTAT 60.067 47.619 34.22 24.51 39.32 2.97
3862 9837 0.317160 ACACAACTACGCAGCTGCTA 59.683 50.000 34.22 23.17 39.32 3.49
3863 9838 0.532862 AACACAACTACGCAGCTGCT 60.533 50.000 34.22 23.29 39.32 4.24
3864 9839 0.307760 AAACACAACTACGCAGCTGC 59.692 50.000 29.12 29.12 37.78 5.25
3865 9840 4.404507 AATAAACACAACTACGCAGCTG 57.595 40.909 10.11 10.11 0.00 4.24
3866 9841 5.929992 TCTTAATAAACACAACTACGCAGCT 59.070 36.000 0.00 0.00 0.00 4.24
3867 9842 6.160664 TCTTAATAAACACAACTACGCAGC 57.839 37.500 0.00 0.00 0.00 5.25
3868 9843 8.056571 GCTATCTTAATAAACACAACTACGCAG 58.943 37.037 0.00 0.00 0.00 5.18
3869 9844 7.546316 TGCTATCTTAATAAACACAACTACGCA 59.454 33.333 0.00 0.00 0.00 5.24
3870 9845 7.902032 TGCTATCTTAATAAACACAACTACGC 58.098 34.615 0.00 0.00 0.00 4.42
3871 9846 8.056571 GCTGCTATCTTAATAAACACAACTACG 58.943 37.037 0.00 0.00 0.00 3.51
3884 9859 6.536582 CACAACTACACAGCTGCTATCTTAAT 59.463 38.462 15.27 0.00 0.00 1.40
4072 14691 3.246226 CAGTTTGATCTAGGTATGCACGC 59.754 47.826 0.00 0.00 0.00 5.34
4092 14711 6.103330 TCATTTCATGATGGCATTTGAACAG 58.897 36.000 19.99 16.26 33.59 3.16
4209 14828 2.816087 GTCAAGGATGCTTTCTTCTGCA 59.184 45.455 0.00 0.00 43.67 4.41
4239 14858 2.138535 ATCTGGGGGATAGGCAATCA 57.861 50.000 1.28 0.00 36.20 2.57
4295 14914 8.257306 GCTCCTCCATATTGTTTTGGAATTTTA 58.743 33.333 0.00 0.00 41.36 1.52
4315 14934 1.613630 TCCCACTCCTTGGCTCCTC 60.614 63.158 0.00 0.00 45.37 3.71
4317 14936 2.674220 CCTCCCACTCCTTGGCTCC 61.674 68.421 0.00 0.00 45.37 4.70
4319 14938 3.334054 GCCTCCCACTCCTTGGCT 61.334 66.667 0.00 0.00 45.37 4.75
4330 14949 2.993853 CTGTCTTCTGGGCCTCCC 59.006 66.667 4.53 0.00 45.71 4.30
4331 14950 2.270527 GCTGTCTTCTGGGCCTCC 59.729 66.667 4.53 0.00 0.00 4.30
4333 14952 4.400961 GCGCTGTCTTCTGGGCCT 62.401 66.667 4.53 0.00 42.41 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.